AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0006410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006410 MtrunA17_Chr4g0005791 83.895 534 20 4 610 1084 78 604 0.0 877
Msa0006410 MtrunA17_Chr4g0005791 59.004 261 62 4 41 256 31 291 4.05e-78 268
Msa0006410 MtrunA17_Chr4g0005791 49.832 297 54 5 338 545 312 602 1.60e-72 253
Msa0006410 MtrunA17_Chr1g0149701 76.061 330 7 4 775 1057 8 312 9.16e-160 475
Msa0006410 MtrunA17_Chr1g0149701 51.931 233 56 5 338 520 78 304 1.56e-58 204
Msa0006410 MtrunA17_Chr1g0149701 74.000 50 13 0 207 256 8 57 2.18e-12 69.7
Msa0006410 MtrunA17_Chr1g0149181 83.824 136 22 0 125 260 7 142 2.32e-68 225
Msa0006410 MtrunA17_Chr1g0149181 64.286 140 46 3 685 824 3 138 2.08e-46 163
Msa0006410 MtrunA17_Chr1g0149691 56.557 122 32 2 596 696 1 122 1.66e-31 120
Msa0006410 MtrunA17_Chr1g0149691 88.679 53 5 1 76 128 46 97 2.27e-23 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006410 AT5G11030.3 45.455 484 236 8 623 1081 92 572 1.48e-110 356
Msa0006410 AT5G11030.3 30.137 511 232 13 51 507 43 482 2.29e-40 158
Msa0006410 AT5G11030.1 45.082 488 236 9 623 1081 116 600 3.64e-108 350
Msa0006410 AT5G11030.1 30.137 511 232 13 51 507 67 506 2.87e-40 159
Msa0006410 AT5G11030.6 43.504 508 235 8 623 1081 92 596 1.16e-107 349
Msa0006410 AT5G11030.6 30.787 432 207 9 51 438 43 426 4.03e-44 170
Msa0006410 AT5G11030.2 43.164 512 235 9 623 1081 116 624 2.72e-105 343
Msa0006410 AT5G11030.2 30.787 432 207 8 51 438 67 450 6.50e-44 170
Msa0006410 AT5G11030.8 41.458 439 210 5 623 1017 92 527 3.74e-85 286
Msa0006410 AT5G11030.8 36.400 250 114 3 51 256 43 291 1.81e-35 143
Msa0006410 AT5G11030.8 34.091 132 69 2 325 438 295 426 1.20e-12 72.4
Msa0006410 AT5G11030.9 44.025 318 166 3 623 931 92 406 3.66e-75 255
Msa0006410 AT5G11030.9 30.716 433 208 8 51 439 43 427 2.68e-45 170
Msa0006410 AT5G11030.4 40.431 418 202 5 623 996 92 506 1.22e-74 256
Msa0006410 AT5G11030.4 36.400 250 114 3 51 256 43 291 1.48e-35 143
Msa0006410 AT5G11030.4 35.652 115 59 1 339 438 312 426 1.17e-12 72.4
Msa0006410 AT5G11030.5 40.431 418 202 5 623 996 92 506 1.22e-74 256
Msa0006410 AT5G11030.5 36.400 250 114 3 51 256 43 291 1.48e-35 143
Msa0006410 AT5G11030.5 35.652 115 59 1 339 438 312 426 1.17e-12 72.4
Msa0006410 AT5G11030.7 40.431 418 202 5 623 996 92 506 1.22e-74 256
Msa0006410 AT5G11030.7 36.400 250 114 3 51 256 43 291 1.48e-35 143
Msa0006410 AT5G11030.7 35.652 115 59 1 339 438 312 426 1.17e-12 72.4

Find 231 sgRNAs with CRISPR-Local

Find 1387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTGTAGATTGCCATTT+TGG 0.068680 1_1:-9276597 Msa0006410:intron
CACATCCGTATATATCATTT+TGG 0.099947 1_1:-9291208 Msa0006410:CDS
ATGAAAAGTTGCTTAGTTTA+AGG 0.110028 1_1:-9275431 Msa0006410:three_prime_UTR
CAATTTCCTTGATTCTTTAT+TGG 0.175564 1_1:-9282107 Msa0006410:CDS
GGGCGAAGCAGCACCGTTTC+TGG 0.187834 1_1:-9283039 Msa0006410:CDS
TTCTATGCTGTTATTCTTCA+TGG 0.204426 1_1:-9275397 Msa0006410:three_prime_UTR
TACATTGTTCCTCCTTTATC+AGG 0.214930 1_1:-9279623 Msa0006410:CDS
CCATTTCCTTGATTCTTTAT+CGG 0.234578 1_1:-9295414 Msa0006410:CDS
TGTCCTTGGGACAACATTTC+GGG 0.246227 1_1:+9275267 None:intergenic
AGTTCCCTTGATGTGTTAAA+AGG 0.248367 1_1:-9291867 Msa0006410:CDS
AAGCATGGTTGCGCTCTTTC+AGG 0.249819 1_1:-9277691 Msa0006410:intron
AACCTTTCAGGCTGTTATAT+TGG 0.263078 1_1:-9291925 Msa0006410:intron
TTCAATACATTAAGAATTAT+AGG 0.272638 1_1:+9278391 None:intergenic
GGAGGTAGTACTCTTATCTT+AGG 0.274182 1_1:-9292554 Msa0006410:CDS
TTCATTGAAGGTTGTACATT+TGG 0.275843 1_1:-9293106 Msa0006410:CDS
ATCCAACTTGCAGGGGTATT+GGG 0.282083 1_1:-9275178 Msa0006410:three_prime_UTR
GCACCATTTCAAGTGGATTT+AGG 0.282920 1_1:+9287766 None:intergenic
CAGTACTAACGAATGGTAAC+TGG 0.289906 1_1:+9292667 None:intergenic
ATGTCCTTGGGACAACATTT+CGG 0.290212 1_1:+9275266 None:intergenic
GGGAACTATTTCTGTGTTCT+AGG 0.292757 1_1:+9291883 None:intergenic
CCATTCCAATTCACAAACTA+TGG 0.303989 1_1:+9275230 None:intergenic
AAGCATGGTGCCGCTCTTGC+AGG 0.306560 1_1:-9292399 Msa0006410:intron
ATGGAGATATCCGTGGAAAC+TGG 0.307412 1_1:-9292104 Msa0006410:CDS
ACACCAACTCGAGTGGATTA+AGG 0.307493 1_1:+9275798 None:intergenic
GAGAAACTCCGAGCTCTTCT+TGG 0.311506 1_1:-9292882 Msa0006410:CDS
CTGAAGACCATACAAGCTTT+TGG 0.318173 1_1:+9275336 None:intergenic
AACTTCCATAGTTTGTGAAT+TGG 0.326885 1_1:-9275235 Msa0006410:three_prime_UTR
TATCCAACTTGCAGGGGTAT+TGG 0.329415 1_1:-9275179 Msa0006410:three_prime_UTR
ATTGGTTGGAGCAAGGGATT+TGG 0.330601 1_1:-9297765 Msa0006410:CDS
TGGCATTTCAAGTTCTTGTT+TGG 0.340358 1_1:-9294850 Msa0006410:CDS
GACGCCTCCGGATGGATATA+AGG 0.343902 1_1:+9278440 None:intergenic
TTCGTACTTTAGGGCATGAT+TGG 0.344615 1_1:+9282982 None:intergenic
GGCTGTTATATTGGCTATCA+TGG 0.351013 1_1:-9291916 Msa0006410:CDS
AAAGGAAGGTATTTATGAAT+TGG 0.351445 1_1:+9275508 None:intergenic
GGAACCCAAAATGATATATA+CGG 0.356153 1_1:+9291203 None:intergenic
ACTTCTTTATGTTCATTGTA+TGG 0.357905 1_1:+9295374 None:intergenic
TTCGATTCTTAATTCATTGA+AGG 0.362265 1_1:-9293118 Msa0006410:CDS
CCCTTTGAGAGCCCTGATAA+AGG 0.363520 1_1:+9279611 None:intergenic
TATAATTCTTAATGTATTGA+AGG 0.365795 1_1:-9278389 Msa0006410:CDS
AGTGAATTTATCCAACTTGC+AGG 0.368304 1_1:-9275187 Msa0006410:three_prime_UTR
AGTCACATAACCTGTCTTCT+TGG 0.368314 1_1:-9275735 Msa0006410:exon
TCATTATTACAAATCTGTAT+AGG 0.373134 1_1:+9276248 None:intergenic
AGAAAATAAAGATGATTATA+TGG 0.373800 1_1:-9277731 Msa0006410:CDS
AAAATATTTCAAAGATACTT+TGG 0.380615 1_1:+9275712 None:intergenic
CGTGCTCAAACTGACGCCTC+TGG 0.381875 1_1:+9293157 None:intergenic
TGACGTACTACTGGAGATTT+CGG 0.381915 1_1:+9276547 None:intergenic
CACATCCAGATATATCATTC+TGG 0.382915 1_1:-9276490 Msa0006410:CDS
AAGGCTGTTTCAAAGTTTGC+TGG 0.387511 1_1:-9281327 Msa0006410:CDS
AAGGCTGTTTCAAAGTTTGC+TGG 0.387511 1_1:-9294870 Msa0006410:CDS
ATTTAATTGAAACAGACATT+AGG 0.390893 1_1:-9279677 Msa0006410:intron
CCGAACAAGATCAACCAAAA+TGG 0.392279 1_1:+9276583 None:intergenic
TATTCATTGCGATTCTCAAT+TGG 0.394322 1_1:-9297733 Msa0006410:CDS
CCGATAAAGAATCAAGGAAA+TGG 0.399795 1_1:+9295414 None:intergenic
TGCAGAGCTGAGAAAAGATT+TGG 0.400864 1_1:+9292048 None:intergenic
GGCGAAGCAGCACCGTTTCT+GGG 0.404028 1_1:-9283038 Msa0006410:CDS
TTCTCTTTATGCTCATTGTC+CGG 0.411566 1_1:+9282067 None:intergenic
GAGCAACAACCAAGCATTGC+AGG 0.412604 1_1:+9292850 None:intergenic
GGAGTCCAGAATGATATATC+TGG 0.413275 1_1:+9276485 None:intergenic
CGACCTAAATCCACTTGAAA+TGG 0.415542 1_1:-9287769 Msa0006410:CDS
GCTTGGTAGTTGGAAGAAGT+TGG 0.425587 1_1:-9282169 Msa0006410:intron
AGAAAATAACGATGATTGTA+TGG 0.426241 1_1:-9292439 Msa0006410:CDS
AAGTTCACCAAAAGCTTGTA+TGG 0.430358 1_1:-9275343 Msa0006410:three_prime_UTR
GTGCTTTGTTATTAGTCTGT+TGG 0.432386 1_1:+9291228 None:intergenic
ATCAAAAGGTGGCAAGCAAT+AGG 0.434726 1_1:-9277493 Msa0006410:CDS
AGTTGTTACTAGACTGAGAT+AGG 0.435944 1_1:+9292610 None:intergenic
TTGATCATGGCTCTTGAGAT+TGG 0.436523 1_1:-9297783 None:intergenic
GGTGAACTTGCAAACTCGAT+TGG 0.436914 1_1:+9275357 None:intergenic
TACACTAGTGACAGGTATAA+TGG 0.441196 1_1:-9275870 Msa0006410:CDS
AACTTATGATGTCGAGGTTG+TGG 0.443126 1_1:-9277862 Msa0006410:CDS
GGATGCTGCTCTTTCTGATC+CGG 0.444927 1_1:-9282086 Msa0006410:CDS
CTTGAGATTGGTTGGAGCAA+GGG 0.444980 1_1:-9297771 Msa0006410:CDS
CACCAACTCGAGTGGATTAA+GGG 0.445019 1_1:+9275799 None:intergenic
ATATGAAATTTGCAATAAGT+TGG 0.447279 1_1:-9293025 Msa0006410:CDS
GCAAACTTTGAAACAGCCTT+TGG 0.451372 1_1:+9281330 None:intergenic
TAAGTCTGCCGTGGGAGTTA+AGG 0.460107 1_1:-9277444 Msa0006410:CDS
ATCGATATAAGTACCTGAAA+AGG 0.462072 1_1:-9275474 Msa0006410:three_prime_UTR
GCAAACTTTGAAACAGCCTT+TGG 0.465988 1_1:+9294873 None:intergenic
CCATAGTTTGTGAATTGGAA+TGG 0.469887 1_1:-9275230 Msa0006410:three_prime_UTR
GTGAACTTGCAAACTCGATT+GGG 0.470105 1_1:+9275358 None:intergenic
TCATGGCTCTTGAGATTGGT+TGG 0.470749 1_1:-9297779 Msa0006410:CDS
GTGCTTTGTTATTAATATGT+TGG 0.473008 1_1:+9276510 None:intergenic
CTTGCTGAAACTGACGCCTC+CGG 0.473962 1_1:+9278428 None:intergenic
TCCCAATGTCTCTGAGTTGG+TGG 0.474231 1_1:-9291183 Msa0006410:CDS
GATACTTTGGCCAAGAAGAC+AGG 0.475042 1_1:+9275725 None:intergenic
TTCGTAATAACCAGATCAAA+AGG 0.475606 1_1:-9277507 Msa0006410:CDS
TTCGTAATAACCAGATCAAA+AGG 0.475606 1_1:-9292224 Msa0006410:intron
GACATTAGGTTACTCAAGTA+AGG 0.477643 1_1:-9279663 Msa0006410:CDS
GACTCCCAGCGTCCTTGAGT+TGG 0.478137 1_1:-9276468 Msa0006410:CDS
TAAACAAGGTCTACAATGAA+TGG 0.478869 1_1:-9275907 Msa0006410:CDS
CTGTCATTATACCTGTCACT+CGG 0.484129 1_1:+9287811 None:intergenic
TCCCAGCGTCCTTGAGTTGG+TGG 0.487298 1_1:-9276465 Msa0006410:CDS
TTTCAGTCCTTATATCCATC+CGG 0.489686 1_1:-9278447 Msa0006410:intron
ATATGACGTTTGCAATAAGT+TGG 0.490710 1_1:-9278296 Msa0006410:CDS
TCTATATGTCCTGCAATGCT+TGG 0.492257 1_1:-9292859 Msa0006410:intron
GTCAATTCTAAGACCTCCAC+AGG 0.493653 1_1:-9276441 Msa0006410:CDS
GGTTCCCAATGTCTCTGAGT+TGG 0.494237 1_1:-9291186 Msa0006410:CDS
CACTTGAAATGGTGCTGTCT+CGG 0.494883 1_1:-9287758 Msa0006410:CDS
CATATCTTCTTTAGCAGCAT+GGG 0.497632 1_1:+9277549 None:intergenic
CTCCACCAACTCAGAGACAT+TGG 0.497827 1_1:+9291181 None:intergenic
AGACACATGCACATCATGTA+TGG 0.498002 1_1:+9275153 None:intergenic
CGCATCACGCTGCTCAGGTA+GGG 0.499009 1_1:+9291124 None:intergenic
AAGTTACGACTCTATGTCCT+TGG 0.506562 1_1:+9275253 None:intergenic
TGAAATTTGCAATAAGTTGG+TGG 0.508641 1_1:-9293022 Msa0006410:intron
CTTGCAAACTCGATTGGGAT+AGG 0.511267 1_1:+9275363 None:intergenic
ACATTGTTCCTCCTTTATCA+GGG 0.511603 1_1:-9279622 Msa0006410:CDS
CACTCGAGTTGGTGTTGTAT+CGG 0.512939 1_1:-9275790 Msa0006410:CDS
CCTTTGCAGACCCGAGTGAC+AGG 0.513208 1_1:-9287822 Msa0006410:intron
TAGCTCTACCATGCTAGCAT+AGG 0.514476 1_1:+9297671 None:intergenic
CATATAGACCAAGGAGAGAT+CGG 0.514534 1_1:+9278141 None:intergenic
TTGGCATATAAGATGACCAC+TGG 0.515463 1_1:+9292067 None:intergenic
TCCTTTATCAGGGCTCTCAA+AGG 0.515907 1_1:-9279612 Msa0006410:CDS
TTGGAGCAAGGGATTTGGTA+AGG 0.516646 1_1:-9297760 Msa0006410:CDS
AAGGGTGCATAGAGTATCAA+TGG 0.517976 1_1:+9275817 None:intergenic
TACATTAAGAATTATAGGAA+TGG 0.518279 1_1:+9278396 None:intergenic
GATGTCTTTGACAGAGCTGT+TGG 0.521812 1_1:-9293063 Msa0006410:CDS
CTTAGCAAACTGTGGCATGT+TGG 0.521923 1_1:+9275309 None:intergenic
AATACCGCATCACGCTGCTC+AGG 0.522189 1_1:+9291119 None:intergenic
TCCAACTTGCAGGGGTATTG+GGG 0.522480 1_1:-9275177 Msa0006410:three_prime_UTR
TTGGCATATATGACGACCAC+TGG 0.522576 1_1:+9277350 None:intergenic
CGCATCACTCTGCTCTGGTA+GGG 0.523614 1_1:+9276406 None:intergenic
TCATATCTTCTTTAGCAGCA+TGG 0.524554 1_1:+9277548 None:intergenic
GAGAAGTTCCGATCTCTCCT+TGG 0.530482 1_1:-9278149 Msa0006410:CDS
TCTTGAGATTGGTTGGAGCA+AGG 0.531533 1_1:-9297772 Msa0006410:CDS
CAGCATCCAATAAAGAATCA+AGG 0.532044 1_1:+9282101 None:intergenic
TCCACCAACTCAAGGACGCT+GGG 0.532275 1_1:+9276464 None:intergenic
TCACGAATTGCATCATATTG+TGG 0.532279 1_1:-9277909 Msa0006410:CDS
TGGAGATATCCGTGGAAACT+GGG 0.532584 1_1:-9292103 Msa0006410:CDS
AACAGCCTTTGGCACTTCAA+AGG 0.533231 1_1:+9281341 None:intergenic
GTGAATTTATCCAACTTGCA+GGG 0.534577 1_1:-9275186 Msa0006410:three_prime_UTR
CATCATCCGATAAAGAATCA+AGG 0.538203 1_1:+9295408 None:intergenic
TTCAAGTTCTTGTTTGGACA+TGG 0.538452 1_1:-9294844 Msa0006410:CDS
TCTATATGTCCTGCAGTGCT+TGG 0.539368 1_1:-9278126 Msa0006410:intron
TTCCTTTGTAAGTCTGCCGT+GGG 0.539665 1_1:-9277452 Msa0006410:CDS
CCTTTATCAGGGCTCTCAAA+GGG 0.540181 1_1:-9279611 Msa0006410:intron
TTCTTACTTTGCATCACAGA+TGG 0.541328 1_1:-9277406 Msa0006410:CDS
TCTTTCCTTTGAAGTGCCAA+AGG 0.541722 1_1:-9281346 Msa0006410:CDS
CCGCATCACTCTGCTCTGGT+AGG 0.541825 1_1:+9276405 None:intergenic
CGAGACAGCACCATTTCAAG+TGG 0.542764 1_1:+9287759 None:intergenic
CTCCACCAACTCAAGGACGC+TGG 0.545716 1_1:+9276463 None:intergenic
TCCACCAACTCAGAGACATT+GGG 0.546520 1_1:+9291182 None:intergenic
TTTCCTTTGTAAGTCTGCCG+TGG 0.548311 1_1:-9277453 Msa0006410:CDS
AACTTATGATGTTGAGGCTG+TGG 0.548805 1_1:-9292591 Msa0006410:CDS
TCACGAATTTCATCGAATTG+TGG 0.549287 1_1:-9292638 Msa0006410:CDS
TTCAATGAATTAAGAATCGA+AGG 0.551001 1_1:+9293120 None:intergenic
AGCATAGGGATGATACGAAT+CGG 0.551800 1_1:+9297686 None:intergenic
CTCTGCTCTGGTAGGGAAGG+AGG 0.557747 1_1:+9276413 None:intergenic
AGTTACGACTCTATGTCCTT+GGG 0.557899 1_1:+9275254 None:intergenic
TGACGTTTGCAATAAGTTGG+TGG 0.558002 1_1:-9278293 Msa0006410:intron
AGCTCTACCATGCTAGCATA+GGG 0.558849 1_1:+9297672 None:intergenic
TCTTTCCGTCGAACTGCCAA+AGG 0.559151 1_1:-9294889 Msa0006410:CDS
AGAAGATATGACTGTGGTCA+AGG 0.560239 1_1:-9277536 Msa0006410:CDS
TTCTTGATTAGCATCACAGA+TGG 0.560400 1_1:-9292123 Msa0006410:CDS
TGTTTATCTCATATCAAGCA+TGG 0.560956 1_1:-9277706 Msa0006410:CDS
GAGCAATTACCAAGCACTGC+AGG 0.561694 1_1:+9278117 None:intergenic
TTGCTGCGTACATTTCCCTC+CGG 0.562487 1_1:+9291282 None:intergenic
GTTCATCATCCCAGTTTCCA+CGG 0.563442 1_1:+9292094 None:intergenic
AACAGCCTTTGGCAGTTCGA+CGG 0.564145 1_1:+9294884 None:intergenic
AACAGGATGATGATGCTGCA+AGG 0.566039 1_1:-9278172 Msa0006410:intron
TCATAGCAAAATGTGGTCCA+AGG 0.566129 1_1:-9281257 Msa0006410:CDS
GTAATAATGACAGAATCTAC+AGG 0.566314 1_1:-9276235 Msa0006410:intron
AGAATTGAAAGCATATCCCT+TGG 0.566650 1_1:+9281240 None:intergenic
AGGGAAGGAGGTCCTCCCTG+TGG 0.567977 1_1:+9276425 None:intergenic
GAAGGAGGTCCTCCCTGTGG+AGG 0.569470 1_1:+9276428 None:intergenic
TCCCCAATACCCCTGCAAGT+TGG 0.571394 1_1:+9275176 None:intergenic
GTTCATCATCGCAGTTTCCA+CGG 0.571628 1_1:+9277377 None:intergenic
AATACCGCATCACTCTGCTC+TGG 0.572295 1_1:+9276401 None:intergenic
GAAATTGACAAGCTCTGAGA+TGG 0.573186 1_1:+9282123 None:intergenic
GTGCTCAAACTGACGCCTCT+GGG 0.574341 1_1:+9293158 None:intergenic
CCGCATCACGCTGCTCAGGT+AGG 0.575229 1_1:+9291123 None:intergenic
CTGAAACTGACGCCTCCGGA+TGG 0.576080 1_1:+9278432 None:intergenic
AGTAACAACTTATGATGTTG+AGG 0.576793 1_1:-9292597 Msa0006410:CDS
GACAACATTTCGGGACAACA+AGG 0.577086 1_1:+9275276 None:intergenic
TTTGGTTGATCTTGTTCGGA+GGG 0.577528 1_1:-9276579 Msa0006410:CDS
GACGCCTCTGGGTAGAGATA+AGG 0.578349 1_1:+9293169 None:intergenic
CTCCCACGGCAGACTTACAA+AGG 0.582341 1_1:+9277450 None:intergenic
CCTTTGCGTACACTAGTGAC+AGG 0.584142 1_1:-9275878 Msa0006410:CDS
CACCCTTAATCCACTCGAGT+TGG 0.584466 1_1:-9275801 Msa0006410:CDS
ACAGGATGATGATGCTGCAA+GGG 0.588404 1_1:-9278171 Msa0006410:intron
CATATAGACCAAGAAGAGCT+CGG 0.595242 1_1:+9292874 None:intergenic
GCATGTTTCCTTAACTCCCA+CGG 0.595250 1_1:+9277436 None:intergenic
TCACTCTGCTCTGGTAGGGA+AGG 0.596311 1_1:+9276410 None:intergenic
CCTGAAAAGGCTATTGAGTG+TGG 0.596841 1_1:-9275461 Msa0006410:three_prime_UTR
TGAGCTTCAGAACCCAGAAA+CGG 0.597327 1_1:+9283026 None:intergenic
AACAATGTAACTCGCAGCGT+TGG 0.598271 1_1:+9279637 None:intergenic
CGATACAACACCAACTCGAG+TGG 0.600850 1_1:+9275791 None:intergenic
TCACGCTGCTCAGGTAGGGA+AGG 0.606499 1_1:+9291128 None:intergenic
GATCAGTTTATAGCGAAATG+TGG 0.609846 1_1:-9294807 Msa0006410:CDS
TGGCATATATGACGACCACT+GGG 0.610887 1_1:+9277351 None:intergenic
TGAATTTATCCAACTTGCAG+GGG 0.612000 1_1:-9275185 Msa0006410:three_prime_UTR
GTATCATCCCTATGCTAGCA+TGG 0.615549 1_1:-9297679 Msa0006410:intron
GTTGTTCAAGTGACAACTGA+TGG 0.617319 1_1:-9297711 Msa0006410:CDS
CCTACCTGAGCAGCGTGATG+CGG 0.618000 1_1:-9291123 Msa0006410:intron
AGTACTAACGAATGGTAACT+GGG 0.618319 1_1:+9292668 None:intergenic
CATAGCAAAATGTGGTCCAA+GGG 0.618775 1_1:-9281256 Msa0006410:CDS
GTATTGATGACAGAATCTGC+AGG 0.623488 1_1:-9290911 Msa0006410:intron
TTTAGTTGATCTTATCCGGA+GGG 0.624806 1_1:-9291297 Msa0006410:CDS
AGTTACAACTTATGATGTCG+AGG 0.625717 1_1:-9277868 Msa0006410:CDS
GTCGAGGAGTAGTTTAAACA+AGG 0.628023 1_1:-9275921 Msa0006410:CDS
ACAGGAAAGACAAACTACAC+TGG 0.628349 1_1:-9275950 Msa0006410:intron
TGTCCCGAAATGTTGTCCCA+AGG 0.630551 1_1:-9275270 Msa0006410:three_prime_UTR
AATGGACAAGCTCTGAGATG+AGG 0.631640 1_1:+9295432 None:intergenic
GAATTGACTCCACCAACTCA+AGG 0.639319 1_1:+9276456 None:intergenic
TGTCATTATACCTGTCACTC+GGG 0.641062 1_1:+9287812 None:intergenic
CAGTCCTTATATCCATCCGG+AGG 0.641815 1_1:-9278444 Msa0006410:CDS
TAATTTCTAACCTGCAAGAG+CGG 0.646512 1_1:+9292389 None:intergenic
AGTACTAAAACCTCCACAAG+GGG 0.647595 1_1:-9291156 Msa0006410:CDS
AAATGCATAACACAAAGGCA+AGG 0.647989 1_1:+9292354 None:intergenic
ACAGTTGCAGTACTAACGAA+TGG 0.660390 1_1:+9292660 None:intergenic
ATCACAGATGGCGATATCCG+TGG 0.668265 1_1:-9277394 Msa0006410:CDS
CAGTCCTTATCTCTACCCAG+AGG 0.670046 1_1:-9293173 Msa0006410:CDS
CCTACCAGAGCAGAGTGATG+CGG 0.671711 1_1:-9276405 Msa0006410:intron
TGGCATATAAGATGACCACT+GGG 0.674291 1_1:+9292068 None:intergenic
GATCAGCTCATAGCAAAATG+TGG 0.674377 1_1:-9281264 Msa0006410:CDS
CCTGTCACTAGTGTACGCAA+AGG 0.676146 1_1:+9275878 None:intergenic
GTGAAAAGCTTAGCAAACTG+TGG 0.676993 1_1:+9275301 None:intergenic
GTAATAACCAGATCAAAAGG+TGG 0.680023 1_1:-9277504 Msa0006410:CDS
TTTGAGAGCCCTGATAAAGG+AGG 0.680190 1_1:+9279614 None:intergenic
ACAACATTTCGGGACAACAA+GGG 0.686267 1_1:+9275277 None:intergenic
TAGTACTAAAACCTCCACAA+GGG 0.691480 1_1:-9291157 Msa0006410:CDS
TTAGTACTAAAACCTCCACA+AGG 0.694009 1_1:-9291158 Msa0006410:CDS
GAATGAAATGCATAACACAA+AGG 0.702503 1_1:+9292349 None:intergenic
ACTACACTGGAGTCTTGTCG+AGG 0.706866 1_1:-9275937 Msa0006410:CDS
ACTGCAGGACATATAGACCA+AGG 0.711098 1_1:+9278132 None:intergenic
ATCACAGATGGAGATATCCG+TGG 0.713894 1_1:-9292111 Msa0006410:CDS
GCGATGATGAACAGTCCCAG+TGG 0.740985 1_1:-9277366 Msa0006410:CDS
ATTCTAAGACCTCCACAGGG+AGG 0.747990 1_1:-9276437 Msa0006410:CDS
TGCTAAAGAAGATATCATTG+CGG 0.754498 1_1:-9292259 Msa0006410:CDS
TCAATTCTAAGACCTCCACA+GGG 0.759095 1_1:-9276440 Msa0006410:CDS
TGCTAAAGAAGATATGACTG+TGG 0.759409 1_1:-9277542 Msa0006410:CDS
GTACTAAAACCTCCACAAGG+GGG 0.766590 1_1:-9291155 Msa0006410:CDS
GGGATGATGAACATTCCCAG+TGG 0.777055 1_1:-9292083 Msa0006410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTTATTTATTTT+TGG - chr1_1:9278633-9278652 Msa0006410:intron 0.0%
!!! AAAATATTTTATAAAAATTA+TGG - chr1_1:9283838-9283857 Msa0006410:intron 0.0%
!!! GTTAGTTTTTTTTTTTTTTT+TGG - chr1_1:9275825-9275844 Msa0006410:CDS 10.0%
!!! TAGTTTTTTTTTTTTTTTTG+GGG - chr1_1:9275827-9275846 Msa0006410:CDS 10.0%
!! CTAAAAATTGATATATTTAA+AGG + chr1_1:9275900-9275919 None:intergenic 10.0%
!!! AATCTTAAATTTTTTTTTGA+AGG + chr1_1:9276165-9276184 None:intergenic 10.0%
!! TATTTAAATGATTAAACTAA+TGG - chr1_1:9276188-9276207 Msa0006410:intron 10.0%
!! AAATCTTAAAAAAAATTTAG+AGG - chr1_1:9276323-9276342 Msa0006410:intron 10.0%
!! AATCTTAAAAAAAATTTAGA+GGG - chr1_1:9276324-9276343 Msa0006410:intron 10.0%
!!! TATTTTTAATTAAAATAACG+AGG - chr1_1:9277003-9277022 Msa0006410:intron 10.0%
!! AATCTGATATATTTAATTAA+TGG + chr1_1:9278264-9278283 None:intergenic 10.0%
!! ATTAATTAAATATATCAGAT+TGG - chr1_1:9278263-9278282 Msa0006410:intron 10.0%
!! AAAAAAATTGTATAAACAAA+TGG + chr1_1:9280459-9280478 None:intergenic 10.0%
!!! AAAAATATTTTCAACTTAAA+AGG + chr1_1:9281152-9281171 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAGCTAA+TGG - chr1_1:9283261-9283280 Msa0006410:intron 10.0%
!! AAAAAAAAAAAAAAGCTAAT+GGG - chr1_1:9283262-9283281 Msa0006410:intron 10.0%
!!! TTTTATTTTTTAAAGCATTA+GGG + chr1_1:9283676-9283695 None:intergenic 10.0%
!!! TTTTTATTTTTTAAAGCATT+AGG + chr1_1:9283677-9283696 None:intergenic 10.0%
!! AAATTTAAAAAATAAGAATC+TGG + chr1_1:9284016-9284035 None:intergenic 10.0%
!!! AAAAAATATTTGGTTTTTTA+CGG + chr1_1:9285723-9285742 None:intergenic 10.0%
!! AAATAAGTATTAAAATTCTT+CGG + chr1_1:9285847-9285866 None:intergenic 10.0%
!!! TAACTAAAATAATTTGATTT+TGG + chr1_1:9286707-9286726 None:intergenic 10.0%
!!! AAAATCAAATTATTTTAGTT+AGG - chr1_1:9286706-9286725 Msa0006410:intron 10.0%
!!! AAATCAAATTATTTTAGTTA+GGG - chr1_1:9286707-9286726 Msa0006410:intron 10.0%
!! TTAATAAATAAGGATAAATA+AGG + chr1_1:9288342-9288361 None:intergenic 10.0%
!!! TATTTTCTTCAAAAAAAAAA+AGG + chr1_1:9288497-9288516 None:intergenic 10.0%
!!! ATATTTTCTTCAAAAAAAAA+AGG + chr1_1:9288498-9288517 None:intergenic 10.0%
!!! AAAAAAAAGTATAAAATAGA+AGG + chr1_1:9288833-9288852 None:intergenic 10.0%
!! TTAATAAATAAGGATAAATA+AGG + chr1_1:9288342-9288361 None:intergenic 10.0%
!! AAAATTAATAAATAAGGATA+AGG + chr1_1:9288346-9288365 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr1_1:9288999-9289018 None:intergenic 10.0%
!! AAATTAATAAATAAGGATTA+GGG + chr1_1:9289169-9289188 None:intergenic 10.0%
!! AAAATTAATAAATAAGGATT+AGG + chr1_1:9289170-9289189 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr1_1:9288999-9289018 None:intergenic 10.0%
!! TGATTATAAAAGATTATTTA+CGG + chr1_1:9290018-9290037 None:intergenic 10.0%
!! AATTTGATATCTTTAATTAA+TGG + chr1_1:9291807-9291826 None:intergenic 10.0%
!! ATTAATTAAAGATATCAAAT+TGG - chr1_1:9291806-9291825 Msa0006410:intron 10.0%
!!! AACAATAATAATAACTTTTA+AGG - chr1_1:9294221-9294240 Msa0006410:intron 10.0%
!!! AGTTTTTTTTTTTTTTTTGG+GGG - chr1_1:9275828-9275847 Msa0006410:CDS 15.0%
!!! AATTAAAGGAAAGTTTTAAA+GGG + chr1_1:9275930-9275949 None:intergenic 15.0%
!!! AAATTAAAGGAAAGTTTTAA+AGG + chr1_1:9275931-9275950 None:intergenic 15.0%
!!! TAAAACTTTCCTTTAATTTT+TGG - chr1_1:9275932-9275951 Msa0006410:CDS 15.0%
!!! ATTAAACTAATGGTATTTTA+TGG - chr1_1:9276198-9276217 Msa0006410:intron 15.0%
!! TTGTAAAAACAAAATATTGA+AGG - chr1_1:9276355-9276374 Msa0006410:intron 15.0%
!! TGTAAAAACAAAATATTGAA+GGG - chr1_1:9276356-9276375 Msa0006410:intron 15.0%
!!! AAAATAGAATTGATTTGTAA+CGG + chr1_1:9277264-9277283 None:intergenic 15.0%
!!! CTTTGTTATATTTTATTGAA+AGG - chr1_1:9277404-9277423 Msa0006410:CDS 15.0%
!! AAAAAAAAAACGTATACAAA+AGG + chr1_1:9277731-9277750 None:intergenic 15.0%
!!! TAATTTGATGTATTTCTAAA+TGG - chr1_1:9278393-9278412 Msa0006410:CDS 15.0%
!!! CTTATTTTTAATATATGCAA+TGG + chr1_1:9278575-9278594 None:intergenic 15.0%
!! AAATAAAAAATAAATGACAC+TGG + chr1_1:9278628-9278647 None:intergenic 15.0%
!!! ATTTCAATTTTGATTTTAAC+TGG - chr1_1:9279280-9279299 Msa0006410:intron 15.0%
!! AATAATATTTCTCTTTACTT+TGG - chr1_1:9279370-9279389 Msa0006410:intron 15.0%
!! ATAATATTTCTCTTTACTTT+GGG - chr1_1:9279371-9279390 Msa0006410:intron 15.0%
!!! ATTTTGAAATTGAAAGTTTA+AGG - chr1_1:9279528-9279547 Msa0006410:intron 15.0%
!! CAACATATTAAATCATATTA+CGG + chr1_1:9280202-9280221 None:intergenic 15.0%
!! TACAATAAATTTCAATCAAT+GGG + chr1_1:9281389-9281408 None:intergenic 15.0%
!!! GAATTAAATTGTTTTGAAAT+CGG + chr1_1:9281952-9281971 None:intergenic 15.0%
!! ACTTTATCAAAATTAAAGTA+TGG - chr1_1:9283360-9283379 Msa0006410:intron 15.0%
!! CTTTATCAAAATTAAAGTAT+GGG - chr1_1:9283361-9283380 Msa0006410:intron 15.0%
!!! TTTATTTTTTAAAGCATTAG+GGG + chr1_1:9283675-9283694 None:intergenic 15.0%
!!! TGTTTTTGTAAAATTAGAAA+GGG + chr1_1:9284375-9284394 None:intergenic 15.0%
!!! TTGTTTTTGTAAAATTAGAA+AGG + chr1_1:9284376-9284395 None:intergenic 15.0%
!! AATAATATTTAAGGGTTAAT+AGG + chr1_1:9284997-9285016 None:intergenic 15.0%
!!! ACAATTTTTTTTTTTGTAAC+AGG - chr1_1:9285025-9285044 Msa0006410:intron 15.0%
!! NAAATATTTCAAAGATACTT+TGG + chr1_1:9285261-9285280 None:intergenic 15.0%
!! CAAATAAATCAAGTAAAAAT+GGG + chr1_1:9285568-9285587 None:intergenic 15.0%
!! TCAAATAAATCAAGTAAAAA+TGG + chr1_1:9285569-9285588 None:intergenic 15.0%
!!! ATTTTTACTTGATTTATTTG+AGG - chr1_1:9285568-9285587 Msa0006410:intron 15.0%
!! AGTATTAAAATTTACATTTG+CGG + chr1_1:9285819-9285838 None:intergenic 15.0%
!!! CAAATATATGTGTTTTAAAT+TGG + chr1_1:9286120-9286139 None:intergenic 15.0%
!!! CAATTTAAAACACATATATT+TGG - chr1_1:9286118-9286137 Msa0006410:intron 15.0%
!! AACACATGATTAAAATATAA+AGG - chr1_1:9286356-9286375 Msa0006410:intron 15.0%
!!! AAATCGAATTATTTTAGTTA+GGG + chr1_1:9286432-9286451 None:intergenic 15.0%
!!! AAAATCGAATTATTTTAGTT+AGG + chr1_1:9286433-9286452 None:intergenic 15.0%
!!! TAACTAAAATAATTCGATTT+TGG - chr1_1:9286432-9286451 Msa0006410:intron 15.0%
!! AATAAAAAAAATTACACATG+TGG - chr1_1:9286608-9286627 Msa0006410:intron 15.0%
!!! AATCAAATTATTTTAGTTAG+GGG - chr1_1:9286708-9286727 Msa0006410:intron 15.0%
!! GAGTAAATACAATTTATATT+TGG + chr1_1:9286783-9286802 None:intergenic 15.0%
!! AATATAAATTGTATTTACTC+CGG - chr1_1:9286783-9286802 Msa0006410:intron 15.0%
!!! ACATATTATAATATTTTCTC+CGG + chr1_1:9286938-9286957 None:intergenic 15.0%
!! AGTATTAAAAAAAGAATTGA+GGG + chr1_1:9286986-9287005 None:intergenic 15.0%
!! AAGTATTAAAAAAAGAATTG+AGG + chr1_1:9286987-9287006 None:intergenic 15.0%
!!! ACTTTTGTTTTTTGTTTTAT+GGG + chr1_1:9287632-9287651 None:intergenic 15.0%
!!! TACTTTTGTTTTTTGTTTTA+TGG + chr1_1:9287633-9287652 None:intergenic 15.0%
!! TAATACCTTAAAATACTATT+TGG + chr1_1:9287686-9287705 None:intergenic 15.0%
!! TACTTGACAAAAAAAAATTA+AGG + chr1_1:9287948-9287967 None:intergenic 15.0%
!! TTATTTATGATGTATAGATA+CGG + chr1_1:9288123-9288142 None:intergenic 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr1_1:9288352-9288371 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG + chr1_1:9288438-9288457 None:intergenic 15.0%
!!! AGAATTTTACACTTTTTTTT+TGG - chr1_1:9288574-9288593 Msa0006410:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr1_1:9288352-9288371 None:intergenic 15.0%
!!! AGAATTTTACACTTTTTTTT+TGG - chr1_1:9288574-9288593 Msa0006410:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr1_1:9288352-9288371 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG + chr1_1:9288438-9288457 None:intergenic 15.0%
!!! CAACATATAATTTTTTTGAA+GGG + chr1_1:9289331-9289350 None:intergenic 15.0%
!!! AAAAGTTGAAAGTATAAAAA+TGG - chr1_1:9290675-9290694 Msa0006410:intron 15.0%
!!! AAAGTTGAAAGTATAAAAAT+GGG - chr1_1:9290676-9290695 Msa0006410:intron 15.0%
!! AATAGTAAGAAGTAAAATAT+TGG + chr1_1:9293075-9293094 None:intergenic 15.0%
!!! ACATTTTATTTGTTTAGTTT+CGG - chr1_1:9293210-9293229 Msa0006410:intron 15.0%
!!! AACAAATCTTATTTTGAAAT+TGG - chr1_1:9294157-9294176 Msa0006410:intron 15.0%
!! TTCAATACATTAAGAATTAT+AGG + chr1_1:9294550-9294569 None:intergenic 15.0%
!! TATAATTCTTAATGTATTGA+AGG - chr1_1:9294549-9294568 Msa0006410:intron 15.0%
!! AGAAAATAAAGATGATTATA+TGG - chr1_1:9295207-9295226 Msa0006410:intron 15.0%
!! AAAAGAAATCATAATACAAA+AGG + chr1_1:9295308-9295327 None:intergenic 15.0%
!!! TCTATTGACTAAAATTATAT+GGG + chr1_1:9296195-9296214 None:intergenic 15.0%
!!! TTCTATTGACTAAAATTATA+TGG + chr1_1:9296196-9296215 None:intergenic 15.0%
!! TATTAGAAAAATAGTGTTAA+AGG - chr1_1:9296219-9296238 Msa0006410:intron 15.0%
!! ATTAGAAAAATAGTGTTAAA+GGG - chr1_1:9296220-9296239 Msa0006410:intron 15.0%
!! AAAATATTTCAAAGATACTT+TGG + chr1_1:9297229-9297248 None:intergenic 15.0%
!!! AGTATCTTTGAAATATTTTT+TGG - chr1_1:9297230-9297249 Msa0006410:intron 15.0%
!! AGTCTTGAATAAATAAAGAT+TGG - chr1_1:9275294-9275313 Msa0006410:three_prime_UTR 20.0%
!! GAAAGTGAATATTTATCATA+GGG - chr1_1:9275316-9275335 Msa0006410:three_prime_UTR 20.0%
!! GGAATGAATTTATAAATATG+AGG - chr1_1:9275337-9275356 Msa0006410:three_prime_UTR 20.0%
!!! AATGAATAATTTTAACGTCA+CGG - chr1_1:9275605-9275624 Msa0006410:three_prime_UTR 20.0%
!!! TTTAGAATTTCACTATATTG+AGG - chr1_1:9275646-9275665 Msa0006410:three_prime_UTR 20.0%
!! TTAGAATTTCACTATATTGA+GGG - chr1_1:9275647-9275666 Msa0006410:three_prime_UTR 20.0%
!! ATTGTAATCGAAAAATTTAG+AGG + chr1_1:9275960-9275979 None:intergenic 20.0%
!!! TTTTGAAAAAGGTTCATTTT+TGG + chr1_1:9276264-9276283 None:intergenic 20.0%
!!! ATGAACCTTTTTCAAAAATA+AGG - chr1_1:9276267-9276286 Msa0006410:CDS 20.0%
!!! TGAACCTTTTTCAAAAATAA+GGG - chr1_1:9276268-9276287 Msa0006410:CDS 20.0%
!! AAAAAAAAAAAACAGAGTGA+AGG + chr1_1:9276739-9276758 None:intergenic 20.0%
!! GAAGTAAACTAAAAATCAAA+AGG + chr1_1:9276821-9276840 None:intergenic 20.0%
!! TCAGTAGTAAAGTTATATTA+CGG - chr1_1:9276853-9276872 Msa0006410:intron 20.0%
!!! GTTACAAATCAATTCTATTT+TGG - chr1_1:9277263-9277282 Msa0006410:intron 20.0%
!!! GTTTGAAATACTTTATTTGA+GGG + chr1_1:9277922-9277941 None:intergenic 20.0%
!! TATGCATTTAATCATAAACA+AGG + chr1_1:9278200-9278219 None:intergenic 20.0%
!! ATAATGTATAACTGTAATCT+TGG - chr1_1:9278796-9278815 Msa0006410:intron 20.0%
!!! TCATGATTGGATTAATTTTA+TGG - chr1_1:9278921-9278940 Msa0006410:intron 20.0%
!! CAATATAACCAAATATGATA+AGG - chr1_1:9279089-9279108 Msa0006410:intron 20.0%
!!! CATTTTGAACTATTTTTTTG+AGG - chr1_1:9279231-9279250 Msa0006410:intron 20.0%
!! AGTAAAATCTTATGTACAAT+TGG + chr1_1:9279555-9279574 None:intergenic 20.0%
!!! AATTGTACATAAGATTTTAC+TGG - chr1_1:9279554-9279573 Msa0006410:intron 20.0%
!! ATATGAAATTTGCAATAAGT+TGG - chr1_1:9279913-9279932 Msa0006410:intron 20.0%
!!! CATTTTTTAACTAATACAAC+AGG - chr1_1:9280019-9280038 Msa0006410:intron 20.0%
!! CTACAATAAATTTCAATCAA+TGG + chr1_1:9281390-9281409 None:intergenic 20.0%
!! TCAAGAATTAAATCATCTAA+TGG - chr1_1:9281589-9281608 Msa0006410:intron 20.0%
!! ATAAATGCATTTGAAGATAT+CGG + chr1_1:9281882-9281901 None:intergenic 20.0%
!! ATGATAATCATCAATAAACA+AGG + chr1_1:9283111-9283130 None:intergenic 20.0%
!! GATGATTATCATATATTGTT+AGG - chr1_1:9283119-9283138 Msa0006410:intron 20.0%
!!! ATGGTTTTATTTTATCTTGT+TGG - chr1_1:9283153-9283172 Msa0006410:intron 20.0%
!!! AAATTAAAGTATGGGTTAAT+AGG - chr1_1:9283369-9283388 Msa0006410:intron 20.0%
!!! TCCAAGTTTTTTTTTTTACA+GGG + chr1_1:9283434-9283453 None:intergenic 20.0%
!!! ATTTTAGGGATTTGAAAAAT+TGG - chr1_1:9284516-9284535 Msa0006410:intron 20.0%
!!! TTTTAGGGATTTGAAAAATT+GGG - chr1_1:9284517-9284536 Msa0006410:intron 20.0%
!! TTAACCCTTAAATATTATTC+AGG - chr1_1:9284998-9285017 Msa0006410:intron 20.0%
!! GAAACCTGAATAATATTTAA+GGG + chr1_1:9285005-9285024 None:intergenic 20.0%
!! TGAAACCTGAATAATATTTA+AGG + chr1_1:9285006-9285025 None:intergenic 20.0%
!!! GGATTTTGAATTTTTTAGAT+CGG + chr1_1:9285702-9285721 None:intergenic 20.0%
!! TGCATTAATATATTGTTTGT+TGG - chr1_1:9285892-9285911 Msa0006410:intron 20.0%
!! GTATCAAATCTATTACTTTA+CGG - chr1_1:9286031-9286050 Msa0006410:intron 20.0%
!!! TTGTTTTTTTCACTCAAAAT+CGG - chr1_1:9286212-9286231 Msa0006410:intron 20.0%
!! TATTGAGATACAACAAATAA+GGG + chr1_1:9286258-9286277 None:intergenic 20.0%
!! TTATTGAGATACAACAAATA+AGG + chr1_1:9286259-9286278 None:intergenic 20.0%
!! CTTACTTATTATGAAAATAG+TGG - chr1_1:9286284-9286303 Msa0006410:intron 20.0%
!!! AATCGAATTATTTTAGTTAG+GGG + chr1_1:9286431-9286450 None:intergenic 20.0%
!!! ATCAAATTATTTTAGTTAGG+GGG - chr1_1:9286709-9286728 Msa0006410:intron 20.0%
!!! ATTTGGCTTAATAGTATTTT+TGG + chr1_1:9286766-9286785 None:intergenic 20.0%
!! ATTAAATAATTGATGTGTCA+TGG - chr1_1:9286841-9286860 Msa0006410:intron 20.0%
!! AAAATACTAATAAATCTGAC+CGG - chr1_1:9286916-9286935 Msa0006410:intron 20.0%
!! TAACGTACTATCTTAATTAA+TGG + chr1_1:9287739-9287758 None:intergenic 20.0%
!! ACAAAAAAAAATTAAGGTAC+AGG + chr1_1:9287942-9287961 None:intergenic 20.0%
!! TATTTATGATGTATAGATAC+GGG + chr1_1:9288122-9288141 None:intergenic 20.0%
!!! GAGTTTATATTTTCTATTGT+GGG + chr1_1:9288293-9288312 None:intergenic 20.0%
!!! TGAGTTTATATTTTCTATTG+TGG + chr1_1:9288294-9288313 None:intergenic 20.0%
!! ATAAGGATAAATAAGGATTA+GGG + chr1_1:9288335-9288354 None:intergenic 20.0%
!! AATAAGGATAAATAAGGATT+AGG + chr1_1:9288336-9288355 None:intergenic 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr1_1:9288722-9288741 None:intergenic 20.0%
!! TTATTTGCTTCAAAAAGAAA+AGG + chr1_1:9289140-9289159 None:intergenic 20.0%
!! ATGCAATATATAATTGGTAA+CGG + chr1_1:9289306-9289325 None:intergenic 20.0%
!!! GCAACATATAATTTTTTTGA+AGG + chr1_1:9289332-9289351 None:intergenic 20.0%
!! CTGTAATATATAATTGGTAA+CGG + chr1_1:9289541-9289560 None:intergenic 20.0%
!!! TGGTTTTTTTTATTGGTTTT+GGG + chr1_1:9289686-9289705 None:intergenic 20.0%
!!! ATGGTTTTTTTTATTGGTTT+TGG + chr1_1:9289687-9289706 None:intergenic 20.0%
!! AAAAAATAGTTCGTACTTTA+GGG + chr1_1:9289968-9289987 None:intergenic 20.0%
!! AAAAAAATAGTTCGTACTTT+AGG + chr1_1:9289969-9289988 None:intergenic 20.0%
!!! TTACAAACTAGAATCATTTT+TGG + chr1_1:9290303-9290322 None:intergenic 20.0%
!!! AGATTATGTAAAATTGATTC+CGG + chr1_1:9290458-9290477 None:intergenic 20.0%
!!! TTCTATTTTCTAAGTCTATA+GGG + chr1_1:9291448-9291467 None:intergenic 20.0%
!!! TTTCTATTTTCTAAGTCTAT+AGG + chr1_1:9291449-9291468 None:intergenic 20.0%
!!! TGATTATTTATTGATTTGAC+AGG - chr1_1:9291556-9291575 Msa0006410:intron 20.0%
!! TTGATATCTTTAATTAATGG+AGG + chr1_1:9291804-9291823 None:intergenic 20.0%
!! AACAATTTAATTATCAGGAA+AGG + chr1_1:9291833-9291852 None:intergenic 20.0%
!! CTACAAAAATATTCATTCAA+TGG + chr1_1:9292495-9292514 None:intergenic 20.0%
!!! CATTTTTTTCAAAAACAAAC+AGG - chr1_1:9292606-9292625 Msa0006410:CDS 20.0%
!!! AAACTTTGATATTTCTATGT+AGG + chr1_1:9292917-9292936 None:intergenic 20.0%
!!! AGAATGTAAACATTTGATTT+CGG + chr1_1:9293108-9293127 None:intergenic 20.0%
!!! AATTAAATTAACAGAAGCAT+AGG + chr1_1:9293249-9293268 None:intergenic 20.0%
!! ATTTAATTGAAACAGACATT+AGG - chr1_1:9293261-9293280 Msa0006410:intron 20.0%
!! TTGAAAGACATGTATTAAAA+AGG - chr1_1:9293773-9293792 Msa0006410:intron 20.0%
!! TATCTTGTAAAAAATTACTC+TGG + chr1_1:9293847-9293866 None:intergenic 20.0%
!!! AATTATTTCTTTGAGTAAAG+TGG - chr1_1:9293979-9293998 Msa0006410:intron 20.0%
!!! ATGATATTCAAGTTGATATT+TGG - chr1_1:9294071-9294090 Msa0006410:intron 20.0%
!!! ATTGTACATAACATTTTGTT+TGG - chr1_1:9294294-9294313 Msa0006410:intron 20.0%
!!! TTGTACATAACATTTTGTTT+GGG - chr1_1:9294295-9294314 Msa0006410:intron 20.0%
!! TACATTAAGAATTATAGGAA+TGG + chr1_1:9294545-9294564 None:intergenic 20.0%
!!! TGTAATGAATTTTACTAAAG+TGG + chr1_1:9294894-9294913 None:intergenic 20.0%
!!! TTCCTATTGATTGAAATTTA+TGG - chr1_1:9296105-9296124 Msa0006410:intron 20.0%
!!! TTTTTCAAATACTATGAAAC+AGG + chr1_1:9296566-9296585 None:intergenic 20.0%
!! TCATTATTACAAATCTGTAT+AGG + chr1_1:9296693-9296712 None:intergenic 20.0%
!!! ATACTTTAATTTAGATTGTC+TGG + chr1_1:9296940-9296959 None:intergenic 20.0%
!!! TATCGATTTTCAAGTAAAAA+AGG + chr1_1:9297451-9297470 None:intergenic 20.0%
! GGAAAGTGAATATTTATCAT+AGG - chr1_1:9275315-9275334 Msa0006410:three_prime_UTR 25.0%
!! TTAGGAATTTGTTTGACTAA+CGG + chr1_1:9275457-9275476 None:intergenic 25.0%
!!! TGATGGATTATTTAAGTGTT+AGG + chr1_1:9275475-9275494 None:intergenic 25.0%
! AGATTTATTGTGAACATTGA+TGG + chr1_1:9275492-9275511 None:intergenic 25.0%
!! TGTTCACTTTATTTGATCTA+TGG - chr1_1:9275767-9275786 Msa0006410:CDS 25.0%
!! CTTAACCCTTCTTTATTTAA+AGG + chr1_1:9275864-9275883 None:intergenic 25.0%
! TTAGAGGAACCAAAAATTAA+AGG + chr1_1:9275944-9275963 None:intergenic 25.0%
! ATGATCGATTGAACAATTTA+GGG - chr1_1:9276435-9276454 Msa0006410:CDS 25.0%
!!! TTGTTACTTTATGCAATGAT+TGG + chr1_1:9276708-9276727 None:intergenic 25.0%
!! CAAAGTGTTTGATAAATTAG+CGG - chr1_1:9276945-9276964 Msa0006410:intron 25.0%
! AGAAGTTGAAAGGATAAAAA+TGG - chr1_1:9277369-9277388 Msa0006410:CDS 25.0%
! TAACTTTCTGTTAACAATCA+TGG - chr1_1:9277431-9277450 Msa0006410:CDS 25.0%
! ACTTCTTTATGTTCATTGTA+TGG + chr1_1:9277567-9277586 None:intergenic 25.0%
!! GGTTTGAAATACTTTATTTG+AGG + chr1_1:9277923-9277942 None:intergenic 25.0%
! TTGTAGCTTGAAAGTTAATA+GGG + chr1_1:9277946-9277965 None:intergenic 25.0%
! ATTGTAGCTTGAAAGTTAAT+AGG + chr1_1:9277947-9277966 None:intergenic 25.0%
! AAATCAACAAACGATCAATA+AGG + chr1_1:9278010-9278029 None:intergenic 25.0%
! TATATGTTTGAATACTGCAT+AGG - chr1_1:9278506-9278525 Msa0006410:intron 25.0%
! GCAGTGAAATTATTTAATAC+TGG - chr1_1:9278771-9278790 Msa0006410:intron 25.0%
!! TTGCATTTAAAACTCATGAT+TGG - chr1_1:9278908-9278927 Msa0006410:intron 25.0%
! CAAATTGACCTTATCATATT+TGG + chr1_1:9279100-9279119 None:intergenic 25.0%
!! ACAACGTTAAATATTGCTTT+TGG - chr1_1:9279410-9279429 Msa0006410:intron 25.0%
!!! AAAACCAAAATGCTACTTTT+GGG - chr1_1:9279655-9279674 Msa0006410:CDS 25.0%
! AGGACTGAAAATGAAAAAAT+AGG + chr1_1:9279752-9279771 None:intergenic 25.0%
! TTCAATGAATTAAGAATCGA+AGG + chr1_1:9279821-9279840 None:intergenic 25.0%
! TTCGATTCTTAATTCATTGA+AGG - chr1_1:9279820-9279839 Msa0006410:intron 25.0%
! ATGTTCTCCTAAAAAAGAAA+AGG + chr1_1:9279966-9279985 None:intergenic 25.0%
!!! TACAATCATCGTTATTTTCT+GGG + chr1_1:9280499-9280518 None:intergenic 25.0%
!!! ATACAATCATCGTTATTTTC+TGG + chr1_1:9280500-9280519 None:intergenic 25.0%
! AGAAAATAACGATGATTGTA+TGG - chr1_1:9280499-9280518 Msa0006410:intron 25.0%
!!! AATGGCTTTTGTTTTTGAAT+AGG - chr1_1:9281115-9281134 Msa0006410:intron 25.0%
!!! TGTTAGAAAAGAGTATTAGA+TGG + chr1_1:9281358-9281377 None:intergenic 25.0%
!! TTATTGTAGTCTCACTATTT+TGG - chr1_1:9281401-9281420 Msa0006410:intron 25.0%
! ATATGAGTCTCACATAAATT+TGG - chr1_1:9281443-9281462 Msa0006410:intron 25.0%
!! CCATTGGTTGAAATTTATAT+AGG + chr1_1:9281474-9281493 None:intergenic 25.0%
! CCTATATAAATTTCAACCAA+TGG - chr1_1:9281471-9281490 Msa0006410:intron 25.0%
! AGAATTAAATCATCTAATGG+TGG - chr1_1:9281592-9281611 Msa0006410:intron 25.0%
!! ACATCCGTATATATCATTTT+GGG - chr1_1:9281731-9281750 Msa0006410:intron 25.0%
! TAAATGCATTTGAAGATATC+GGG + chr1_1:9281881-9281900 None:intergenic 25.0%
!!! CATCATTCTCTCTATTTTTT+GGG - chr1_1:9281918-9281937 Msa0006410:intron 25.0%
!!! ATCATTCTCTCTATTTTTTG+GGG - chr1_1:9281919-9281938 Msa0006410:intron 25.0%
! AATATATCCAACTTCAAAAG+TGG - chr1_1:9282100-9282119 Msa0006410:CDS 25.0%
! AGAATCAAGTATTAAGCTAA+TGG - chr1_1:9282129-9282148 Msa0006410:CDS 25.0%
! GAATCAAGTATTAAGCTAAT+GGG - chr1_1:9282130-9282149 Msa0006410:CDS 25.0%
!! TCTTTTCAATGTTTTATGTC+TGG - chr1_1:9282309-9282328 Msa0006410:intron 25.0%
!!! TTGTTAGGCTTTATTTGTAA+TGG - chr1_1:9283134-9283153 Msa0006410:intron 25.0%
! GGAACAATTAGAAATTTAAG+TGG + chr1_1:9283288-9283307 None:intergenic 25.0%
!! AGGTAAAAATGTTTCTGTTT+AGG + chr1_1:9283309-9283328 None:intergenic 25.0%
!! TAAACAGAAACATTTTTACC+TGG - chr1_1:9283308-9283327 Msa0006410:intron 25.0%
! TAATTATTAAACCACTATCC+AGG + chr1_1:9283329-9283348 None:intergenic 25.0%
!!! CAAGTTTTTTTTTTTACAGG+GGG + chr1_1:9283432-9283451 None:intergenic 25.0%
!!! CCAAGTTTTTTTTTTTACAG+GGG + chr1_1:9283433-9283452 None:intergenic 25.0%
!!! CTCCAAGTTTTTTTTTTTAC+AGG + chr1_1:9283435-9283454 None:intergenic 25.0%
!! AAGAATCTTCATTTTACAGA+GGG + chr1_1:9284908-9284927 None:intergenic 25.0%
!! AAAGAATCTTCATTTTACAG+AGG + chr1_1:9284907-9284926 None:intergenic 25.0%
! TCTGTAAAATGAAGATTCTT+TGG - chr1_1:9283462-9283481 Msa0006410:intron 25.0%
! TGTAAAATTAGAAAGGGTTA+GGG + chr1_1:9284369-9284388 None:intergenic 25.0%
! TTGTAAAATTAGAAAGGGTT+AGG + chr1_1:9284370-9284389 None:intergenic 25.0%
!! AAGAAAAAATTGGGGATTTT+AGG - chr1_1:9284484-9284503 Msa0006410:intron 25.0%
!! AGAAAAAATTGGGGATTTTA+GGG - chr1_1:9284485-9284504 Msa0006410:intron 25.0%
! TTTAGGGATTTGAAAAATTG+GGG - chr1_1:9284518-9284537 Msa0006410:intron 25.0%
!!! TTGTTTTCTTGGTTTGAAAT+TGG - chr1_1:9284569-9284588 Msa0006410:intron 25.0%
!!! TGTTTTCTTGGTTTGAAATT+GGG - chr1_1:9284570-9284589 Msa0006410:intron 25.0%
!! AAAGAATCTTCATTTTACAG+AGG - chr1_1:9284907-9284926 Msa0006410:intron 25.0%
!! AAGAATCTTCATTTTACAGA+GGG - chr1_1:9284908-9284927 Msa0006410:intron 25.0%
!!! ATCTCCAAGTTTTTTTTTAC+AGG - chr1_1:9284933-9284952 Msa0006410:intron 25.0%
!!! TCTCCAAGTTTTTTTTTACA+GGG - chr1_1:9284934-9284953 Msa0006410:intron 25.0%
! AAATGCAATTTAATCCCTAA+TGG + chr1_1:9285426-9285445 None:intergenic 25.0%
!!! ATTTCATACTTTGTTGTTAG+AGG - chr1_1:9285639-9285658 Msa0006410:intron 25.0%
!!! TTTGCAGTTTTATTTTGTAC+CGG + chr1_1:9285679-9285698 None:intergenic 25.0%
! CAAACGCATCAAAAAATATT+TGG + chr1_1:9285733-9285752 None:intergenic 25.0%
! AAATAAAATTGCATGCGATT+CGG + chr1_1:9286183-9286202 None:intergenic 25.0%
! AGATGGACAAAAAAAAACTA+TGG - chr1_1:9286309-9286328 Msa0006410:intron 25.0%
!!! ATCGAATTATTTTAGTTAGG+GGG + chr1_1:9286430-9286449 None:intergenic 25.0%
!!! AACATTGACTTGATCAAAAT+TGG + chr1_1:9286499-9286518 None:intergenic 25.0%
! AAATAAAAAAATGACACACG+TGG + chr1_1:9286531-9286550 None:intergenic 25.0%
! TAATTGCTTATAAATGTGAC+CGG + chr1_1:9286805-9286824 None:intergenic 25.0%
! TTGAAAATTATGGACAAAGT+GGG - chr1_1:9287212-9287231 Msa0006410:intron 25.0%
!!! TTTTGAAGTAAACTTCAAGA+TGG - chr1_1:9287361-9287380 Msa0006410:intron 25.0%
! TTCATTAGAAGACAAGTAAA+CGG - chr1_1:9287491-9287510 Msa0006410:intron 25.0%
! ATCAAGATTCAATACATGAT+GGG + chr1_1:9287575-9287594 None:intergenic 25.0%
! AATCAAGATTCAATACATGA+TGG + chr1_1:9287576-9287595 None:intergenic 25.0%
!! AGTAGCCAAATAGTATTTTA+AGG - chr1_1:9287678-9287697 Msa0006410:intron 25.0%
!!! TTAGAATTCACCATTTTTCA+AGG - chr1_1:9287977-9287996 Msa0006410:intron 25.0%
!!! ATTTTTCAAGGTGAATAAGT+GGG - chr1_1:9287989-9288008 Msa0006410:intron 25.0%
! ACATGTATTATTATATGCAG+GGG + chr1_1:9288036-9288055 None:intergenic 25.0%
! GACATGTATTATTATATGCA+GGG + chr1_1:9288037-9288056 None:intergenic 25.0%
! ATAATACCCGATATGAAATA+CGG + chr1_1:9288098-9288117 None:intergenic 25.0%
! GTCAACAAAATTTATTAGCA+AGG - chr1_1:9288203-9288222 Msa0006410:intron 25.0%
! TAAGGATAAATAAGGATTAG+GGG + chr1_1:9288334-9288353 None:intergenic 25.0%
! TTCAAAAAAAAAAAGGCAAG+CGG + chr1_1:9288490-9288509 None:intergenic 25.0%
! AATAAGGATGTCAAAAAAAC+AGG + chr1_1:9288619-9288638 None:intergenic 25.0%
!!! TGCAATGCATTTTTTTTAGA+TGG + chr1_1:9288449-9288468 None:intergenic 25.0%
! AATAAGGATGTCAAAAAAAC+AGG + chr1_1:9288619-9288638 None:intergenic 25.0%
! CAAATGAGCAGAAAAAAATT+AGG + chr1_1:9288965-9288984 None:intergenic 25.0%
! AGGGAAATGCAATATATAAT+TGG + chr1_1:9289312-9289331 None:intergenic 25.0%
!!! AGTGCAATGGTTTTTTTTAT+TGG + chr1_1:9289693-9289712 None:intergenic 25.0%
! ACTGTAAAGTATGAATTTCA+AGG - chr1_1:9290038-9290057 Msa0006410:intron 25.0%
! TATAAGCTATAGTGTATGTT+TGG - chr1_1:9290260-9290279 Msa0006410:intron 25.0%
! TGTAACTTGAAGTATGAAAT+CGG - chr1_1:9290318-9290337 Msa0006410:intron 25.0%
!! AGGTAAAGTGATTTATGTTT+TGG + chr1_1:9290420-9290439 None:intergenic 25.0%
! CTTATTTCCATAAAATCTCA+TGG + chr1_1:9290530-9290549 None:intergenic 25.0%
!! TAGTGATGATTTTATATGCT+TGG - chr1_1:9290752-9290771 Msa0006410:intron 25.0%
! CAATTTCCTTGATTCTTTAT+TGG - chr1_1:9290831-9290850 Msa0006410:intron 25.0%
! ATTTCACTGTTTCATAATGT+AGG - chr1_1:9290990-9291009 Msa0006410:intron 25.0%
! TTGTACAATTGAAGAGTTTA+TGG - chr1_1:9291072-9291091 Msa0006410:intron 25.0%
! AATTGAAGAGTTTATGGATT+TGG - chr1_1:9291078-9291097 Msa0006410:intron 25.0%
!! CTCATCCATCAATTTTAAAT+CGG - chr1_1:9291201-9291220 Msa0006410:CDS 25.0%
! AACGCAACAATTTAATTATC+AGG + chr1_1:9291838-9291857 None:intergenic 25.0%
! TTATGTTAGGTACTAGATTT+GGG + chr1_1:9292170-9292189 None:intergenic 25.0%
! ATTATGTTAGGTACTAGATT+TGG + chr1_1:9292171-9292190 None:intergenic 25.0%
! AGGGTATGTAATAAAGAAAA+CGG + chr1_1:9292561-9292580 None:intergenic 25.0%
!! TTTTCTTTATTACATACCCT+TGG - chr1_1:9292561-9292580 Msa0006410:CDS 25.0%
!!! TTTTTTCAAAAACAAACAGG+AGG - chr1_1:9292609-9292628 Msa0006410:CDS 25.0%
!!! TTTTTCAAAAACAAACAGGA+GGG - chr1_1:9292610-9292629 Msa0006410:CDS 25.0%
!! GATTTTTGTTAATAAGGGAT+GGG - chr1_1:9292644-9292663 Msa0006410:CDS 25.0%
!! ATTTTTGTTAATAAGGGATG+GGG - chr1_1:9292645-9292664 Msa0006410:CDS 25.0%
!!! AAGTAATTCTTTTAAGACTC+AGG - chr1_1:9292809-9292828 Msa0006410:intron 25.0%
! GAAATTCTAATTTGATGAAG+AGG - chr1_1:9292878-9292897 Msa0006410:CDS 25.0%
!! ATATTTCTATGTAGGATCTT+GGG + chr1_1:9292909-9292928 None:intergenic 25.0%
! AAAAGGAAAAAAAACTCAAG+AGG + chr1_1:9292965-9292984 None:intergenic 25.0%
!! TCTTAAAAAGAATTTGCTCT+AGG + chr1_1:9293002-9293021 None:intergenic 25.0%
! GAAGTAAAATATTGGTGAAT+AGG + chr1_1:9293067-9293086 None:intergenic 25.0%
! AATGTTTACATTCTATTCCA+TGG - chr1_1:9293114-9293133 Msa0006410:CDS 25.0%
!!! CTTTTTTTAATACATAGCCA+TGG + chr1_1:9293134-9293153 None:intergenic 25.0%
! CATGGCTATGTATTAAAAAA+AGG - chr1_1:9293132-9293151 Msa0006410:CDS 25.0%
! CATGTTTCTTTATTGAACAA+AGG + chr1_1:9293402-9293421 None:intergenic 25.0%
! CTTTGTTCAATAAAGAAACA+TGG - chr1_1:9293400-9293419 Msa0006410:intron 25.0%
! AGACATGTATTAAAAAGGAT+AGG - chr1_1:9293778-9293797 Msa0006410:intron 25.0%
! AGGTAATGTCTATTAAAGTT+TGG - chr1_1:9293798-9293817 Msa0006410:intron 25.0%
!!! TAATTTTTTACAAGATAGCG+TGG - chr1_1:9293850-9293869 Msa0006410:intron 25.0%
!!! ATAATTTGCTAGGATTTGTT+TGG + chr1_1:9293965-9293984 None:intergenic 25.0%
!!! ACTCAAAGAAATAATTTGCT+AGG + chr1_1:9293975-9293994 None:intergenic 25.0%
! AAAATGTTCAATATTGCTCT+TGG - chr1_1:9294048-9294067 Msa0006410:intron 25.0%
! TTGTTTATTCTTCTCTGTAT+TGG + chr1_1:9294142-9294161 None:intergenic 25.0%
!!! TGTACATAACATTTTGTTTG+GGG - chr1_1:9294296-9294315 Msa0006410:intron 25.0%
!! ATTTCATCTTTTCCTTTGTT+AGG - chr1_1:9294690-9294709 Msa0006410:intron 25.0%
! AATTTATGTTCTCCTAACAA+AGG + chr1_1:9294705-9294724 None:intergenic 25.0%
!! ATGAATTTTACTAAAGTGGA+TGG + chr1_1:9294890-9294909 None:intergenic 25.0%
! ATTTATTTCGATGTTTACTC+AGG - chr1_1:9295142-9295161 Msa0006410:intron 25.0%
! TGGAAAAAATGGAATTTGAT+GGG + chr1_1:9295338-9295357 None:intergenic 25.0%
! TTATAGTGTAATCAAAAGTG+AGG + chr1_1:9295712-9295731 None:intergenic 25.0%
! TGATTACACTATAATCTTTC+AGG - chr1_1:9295718-9295737 Msa0006410:intron 25.0%
!!! ATGAGTTTTTTCTATGTTCT+GGG + chr1_1:9295775-9295794 None:intergenic 25.0%
!!! AATGAGTTTTTTCTATGTTC+TGG + chr1_1:9295776-9295795 None:intergenic 25.0%
! AAAAAAACTTCCAACTTGAA+AGG + chr1_1:9295839-9295858 None:intergenic 25.0%
! AATTTCAATCAATAGGAACT+AGG + chr1_1:9296103-9296122 None:intergenic 25.0%
! CTCCATAAATTTCAATCAAT+AGG + chr1_1:9296110-9296129 None:intergenic 25.0%
! ACATTGTTTATTTAACTAGC+TGG - chr1_1:9296286-9296305 Msa0006410:intron 25.0%
!!! GGAAGTGTTAAATTATCTAA+TGG - chr1_1:9296307-9296326 Msa0006410:intron 25.0%
! AGTGTTAAATTATCTAATGG+TGG - chr1_1:9296310-9296329 Msa0006410:intron 25.0%
!!! GTGCTTTGTTATTAATATGT+TGG + chr1_1:9296431-9296450 None:intergenic 25.0%
! AGGAACAATTAACAATTAAG+AGG + chr1_1:9296870-9296889 None:intergenic 25.0%
!! AGGAAAAAATATTTCTGCTT+AGG + chr1_1:9296890-9296909 None:intergenic 25.0%
!!! TAAGCAGAAATATTTTTTCC+TGG - chr1_1:9296889-9296908 Msa0006410:intron 25.0%
!!! AAGCAGAAATATTTTTTCCT+GGG - chr1_1:9296890-9296909 Msa0006410:intron 25.0%
!!! AAATATTTTTTCCTGGGTTT+TGG - chr1_1:9296896-9296915 Msa0006410:intron 25.0%
! TAATTATTAAACCAAAACCC+AGG + chr1_1:9296910-9296929 None:intergenic 25.0%
!!! TTTGTTTTACAGTGGTTTTT+AGG - chr1_1:9297369-9297388 Msa0006410:intron 25.0%
!!! TTGTTTTACAGTGGTTTTTA+GGG - chr1_1:9297370-9297389 Msa0006410:intron 25.0%
!!! AAAGGAAGGTATTTATGAAT+TGG + chr1_1:9297433-9297452 None:intergenic 25.0%
!!! GATTTTCAAGTAAAAAAGGA+AGG + chr1_1:9297447-9297466 None:intergenic 25.0%
! ATGAAAAGTTGCTTAGTTTA+AGG - chr1_1:9297507-9297526 Msa0006410:intron 25.0%
TATTCATTGCGATTCTCAAT+TGG - chr1_1:9275205-9275224 Msa0006410:three_prime_UTR 30.0%
! TCTAAAATAGTCTCTGATTG+TGG + chr1_1:9275632-9275651 None:intergenic 30.0%
ACTATATTGAGGGAATATTG+TGG - chr1_1:9275657-9275676 Msa0006410:three_prime_UTR 30.0%
TAAAGTGAACACACAGTTAA+AGG + chr1_1:9275758-9275777 None:intergenic 30.0%
! ACCCTTCTTTATTTAAAGGA+GGG + chr1_1:9275860-9275879 None:intergenic 30.0%
! AACCCTTCTTTATTTAAAGG+AGG + chr1_1:9275861-9275880 None:intergenic 30.0%
!!! TGAGCCCTTATTTTTGAAAA+AGG + chr1_1:9276275-9276294 None:intergenic 30.0%
AAATTGTTCAATCGATCATG+TGG + chr1_1:9276434-9276453 None:intergenic 30.0%
CATGATCGATTGAACAATTT+AGG - chr1_1:9276434-9276453 Msa0006410:CDS 30.0%
TAGCAATCATCATCAAACTT+AGG - chr1_1:9276465-9276484 Msa0006410:CDS 30.0%
TATCGTGTTGGAAATAGATT+GGG + chr1_1:9276527-9276546 None:intergenic 30.0%
TTATCGTGTTGGAAATAGAT+TGG + chr1_1:9276528-9276547 None:intergenic 30.0%
!!! CTGATATAGTTTTATCGTGT+TGG + chr1_1:9276539-9276558 None:intergenic 30.0%
!! AGTTATATTACGGCTTTGTT+TGG - chr1_1:9276863-9276882 Msa0006410:intron 30.0%
! CTTTGTTTGGTAAAAAGTAG+CGG - chr1_1:9276876-9276895 Msa0006410:intron 30.0%
ATAGATAAACTTTCTAACCG+CGG - chr1_1:9276902-9276921 Msa0006410:intron 30.0%
TCAATCTATTTACTTATCCG+CGG + chr1_1:9276922-9276941 None:intergenic 30.0%
ACTATAAACTCGTGATAGAA+GGG - chr1_1:9277116-9277135 Msa0006410:intron 30.0%
TTGATTCTTGAGCATAGAAT+CGG - chr1_1:9277168-9277187 Msa0006410:intron 30.0%
!! GACATAAGTATTTGACTTGT+TGG - chr1_1:9277197-9277216 Msa0006410:intron 30.0%
GCAAGATAAAAGAAGTTGAA+AGG - chr1_1:9277359-9277378 Msa0006410:CDS 30.0%
!!! CAATCATGGTTTTATATGCT+TGG - chr1_1:9277445-9277464 Msa0006410:CDS 30.0%
CCATTTCCTTGATTCTTTAT+CGG - chr1_1:9277524-9277543 Msa0006410:CDS 30.0%
ACTTTCAGTCATGTTTCATA+GGG - chr1_1:9277666-9277685 Msa0006410:intron 30.0%
!!! GTTTTTTTTTTGTACCATCG+AGG - chr1_1:9277740-9277759 Msa0006410:intron 30.0%
TGTAGCTTGAAAGTTAATAG+GGG + chr1_1:9277945-9277964 None:intergenic 30.0%
! AGAACAAAAAGCATGTACTT+TGG + chr1_1:9278158-9278177 None:intergenic 30.0%
GGGATTTAATTATCCATGAA+GGG + chr1_1:9278295-9278314 None:intergenic 30.0%
TGGGATTTAATTATCCATGA+AGG + chr1_1:9278296-9278315 None:intergenic 30.0%
CACTGTAACAACTAATTTGA+TGG - chr1_1:9278349-9278368 Msa0006410:CDS 30.0%
!! TTTATCTTTGAAGTCCAAAG+TGG - chr1_1:9278436-9278455 Msa0006410:CDS 30.0%
GCATATAGTTGTATCAGTAA+AGG + chr1_1:9278463-9278482 None:intergenic 30.0%
ATTTAACTGAAGCAGACATT+AGG - chr1_1:9278684-9278703 Msa0006410:intron 30.0%
AATTAAAACCAAAATGAGCC+AGG + chr1_1:9278960-9278979 None:intergenic 30.0%
TTTGAAAGAGATGTATGAAG+AGG - chr1_1:9279116-9279135 Msa0006410:intron 30.0%
TTGAAAGAGATGTATGAAGA+GGG - chr1_1:9279117-9279136 Msa0006410:intron 30.0%
!!! TTTTTGAGGCGATTTTTTCT+TGG - chr1_1:9279245-9279264 Msa0006410:intron 30.0%
!!! CAAAACCAAAATGCTACTTT+TGG - chr1_1:9279654-9279673 Msa0006410:CDS 30.0%
TTCATTGAAGGTTGTACATT+TGG - chr1_1:9279832-9279851 Msa0006410:intron 30.0%
! TGAAATTTGCAATAAGTTGG+TGG - chr1_1:9279916-9279935 Msa0006410:intron 30.0%
AGTAACAACTTATGATGTTG+AGG - chr1_1:9280341-9280360 Msa0006410:intron 30.0%
!! TATTTTCTGGGAAATTGACA+TGG + chr1_1:9280487-9280506 None:intergenic 30.0%
!! TGTTTTTATCATGTCAAGCA+TGG - chr1_1:9280524-9280543 Msa0006410:intron 30.0%
GAATGAAATGCATAACACAA+AGG + chr1_1:9280592-9280611 None:intergenic 30.0%
CTGGAAAAATGGAATTTGAT+GGG + chr1_1:9280622-9280641 None:intergenic 30.0%
ACTGGAAAAATGGAATTTGA+TGG + chr1_1:9280623-9280642 None:intergenic 30.0%
!! ATCAAATTCCATTTTTCCAG+TGG - chr1_1:9280622-9280641 Msa0006410:intron 30.0%
TGCTAAAGAAGATATCATTG+CGG - chr1_1:9280679-9280698 Msa0006410:intron 30.0%
TTCGTAATAACCAGATCAAA+AGG - chr1_1:9280714-9280733 Msa0006410:intron 30.0%
! GATCTTTTACTCTTTCAACA+AGG - chr1_1:9280953-9280972 Msa0006410:intron 30.0%
TGATTACACTATAACCTTTC+AGG - chr1_1:9281001-9281020 Msa0006410:intron 30.0%
!!! TAGTCTCACTATTTTGGAAT+TGG - chr1_1:9281407-9281426 Msa0006410:intron 30.0%
!!! CTGTTTTAGTTGATCTTATC+CGG - chr1_1:9281637-9281656 Msa0006410:intron 30.0%
! CACATCCGTATATATCATTT+TGG - chr1_1:9281730-9281749 Msa0006410:intron 30.0%
GGAACCCAAAATGATATATA+CGG + chr1_1:9281738-9281757 None:intergenic 30.0%
!!! GCATCATTCTCTCTATTTTT+TGG - chr1_1:9281917-9281936 Msa0006410:intron 30.0%
!!! TCATAAACCACTTTTGAAGT+TGG + chr1_1:9282110-9282129 None:intergenic 30.0%
! TTTGAAACAATAACCCTTGA+GGG + chr1_1:9282558-9282577 None:intergenic 30.0%
AAGGGTTATTGTTTCAAAGT+TGG - chr1_1:9282560-9282579 Msa0006410:intron 30.0%
AGGGTTATTGTTTCAAAGTT+GGG - chr1_1:9282561-9282580 Msa0006410:intron 30.0%
CAGCTTTACTATTAACATCT+TGG + chr1_1:9282758-9282777 None:intergenic 30.0%
! TATCCAGTTACGGATTAAAT+AGG + chr1_1:9282970-9282989 None:intergenic 30.0%
TCTTAACATCTATCCAGTTA+CGG + chr1_1:9282980-9282999 None:intergenic 30.0%
! AAACATTTTTACCTGGATAG+TGG - chr1_1:9283315-9283334 Msa0006410:intron 30.0%
CCCCTGTAAAAAAAAAAACT+TGG - chr1_1:9283430-9283449 Msa0006410:intron 30.0%
! AGAATCTTCATTTTACAGAG+GGG + chr1_1:9284909-9284928 None:intergenic 30.0%
!! ATGTTGTTGCTGATTTATGA+AGG + chr1_1:9284317-9284336 None:intergenic 30.0%
AATCTGGGCAAGAAAAAATT+GGG - chr1_1:9284475-9284494 Msa0006410:intron 30.0%
! TTTAGGGATTTGAGGATTTT+AGG - chr1_1:9284501-9284520 Msa0006410:intron 30.0%
! TTAGGGATTTGAGGATTTTA+GGG - chr1_1:9284502-9284521 Msa0006410:intron 30.0%
!!! TCCATCTGATTTTGTTTTCT+TGG - chr1_1:9284558-9284577 Msa0006410:intron 30.0%
ACCAAGAAAACAAAATCAGA+TGG + chr1_1:9284562-9284581 None:intergenic 30.0%
!!! CTTGTTTTTGTTGTTGTTGA+AGG - chr1_1:9284633-9284652 Msa0006410:intron 30.0%
! AGAATCTTCATTTTACAGAG+GGG - chr1_1:9284909-9284928 Msa0006410:intron 30.0%
!!! CTCCAAGTTTTTTTTTACAG+GGG - chr1_1:9284935-9284954 Msa0006410:intron 30.0%
TACCCCTGTAAAAAAAAACT+TGG + chr1_1:9284940-9284959 None:intergenic 30.0%
ATTTCAAAGATACTTTGGTC+AGG + chr1_1:9285256-9285275 None:intergenic 30.0%
CACAGTGTTTATACAACAAA+AGG + chr1_1:9285454-9285473 None:intergenic 30.0%
! ACTTGATTTATTTGAGGTAG+TGG - chr1_1:9285574-9285593 Msa0006410:intron 30.0%
! CTTGATTTATTTGAGGTAGT+GGG - chr1_1:9285575-9285594 Msa0006410:intron 30.0%
!!! AGTTTTATTTTGTACCGGTT+TGG + chr1_1:9285674-9285693 None:intergenic 30.0%
!! GTTGTTTTGTAAATACCACT+AGG - chr1_1:9285756-9285775 Msa0006410:intron 30.0%
!! TTTGCGGTATGATTTTGAAA+AGG + chr1_1:9285803-9285822 None:intergenic 30.0%
! TTATGAAAATAGTGGAGAGA+TGG - chr1_1:9286292-9286311 Msa0006410:intron 30.0%
! TAAAGGCTTAATAGCAGTTT+TGG - chr1_1:9286373-9286392 Msa0006410:intron 30.0%
TCACAACTTCTTGAAACATA+GGG + chr1_1:9286401-9286420 None:intergenic 30.0%
ATCACAACTTCTTGAAACAT+AGG + chr1_1:9286402-9286421 None:intergenic 30.0%
! GTTTCAAGAAGTTGTGATTT+TGG - chr1_1:9286404-9286423 Msa0006410:intron 30.0%
AATGAGTGGAAATTGGAATA+AGG - chr1_1:9287079-9287098 Msa0006410:intron 30.0%
!! GTCCATAATTTTCAAGAAAG+AGG + chr1_1:9287207-9287226 None:intergenic 30.0%
CTTGAAAATTATGGACAAAG+TGG - chr1_1:9287211-9287230 Msa0006410:intron 30.0%
!!! TTTGTTTTATGGGAGATACA+AGG + chr1_1:9287622-9287641 None:intergenic 30.0%
TACAGGTATATCGATACAAA+AGG + chr1_1:9287925-9287944 None:intergenic 30.0%
CACTTATTCACCTTGAAAAA+TGG + chr1_1:9287990-9288009 None:intergenic 30.0%
!!! CATTTTTCAAGGTGAATAAG+TGG - chr1_1:9287988-9288007 Msa0006410:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG - chr1_1:9287990-9288009 Msa0006410:intron 30.0%
GGACATGTATTATTATATGC+AGG + chr1_1:9288038-9288057 None:intergenic 30.0%
TGAGCATAACTCAGTTAATA+GGG + chr1_1:9288059-9288078 None:intergenic 30.0%
AAGTATGCCGTATTTCATAT+CGG - chr1_1:9288088-9288107 Msa0006410:intron 30.0%
AGAATGAATGAACAAGACTA+GGG + chr1_1:9288168-9288187 None:intergenic 30.0%
AAGAATGAATGAACAAGACT+AGG + chr1_1:9288169-9288188 None:intergenic 30.0%
! ATACTCTTTTCCTCTTTTGT+AGG + chr1_1:9288249-9288268 None:intergenic 30.0%
! AAAGAGGAAAAGAGTATAAG+TGG - chr1_1:9288252-9288271 Msa0006410:intron 30.0%
AAATAAGGATTAGGGGATTA+GGG + chr1_1:9288327-9288346 None:intergenic 30.0%
TAAATAAGGATTAGGGGATT+AGG + chr1_1:9288328-9288347 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_1:9288402-9288421 None:intergenic 30.0%
ATCATACGTGATCATTGATA+TGG + chr1_1:9288527-9288546 None:intergenic 30.0%
AAATGAGCGGGAAAAAAATT+AGG + chr1_1:9288673-9288692 None:intergenic 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_1:9288402-9288421 None:intergenic 30.0%
CTTCAAAAAAAAAAGGCAAG+CGG + chr1_1:9288774-9288793 None:intergenic 30.0%
ATCATACGTGATCATTGATA+TGG + chr1_1:9288527-9288546 None:intergenic 30.0%
! AAACCTAATTTGCAAATGAG+CGG + chr1_1:9289049-9289068 None:intergenic 30.0%
CAAGAGGATAGGAATAAAAT+TGG + chr1_1:9289117-9289136 None:intergenic 30.0%
!!! TTTTTTACAATAAACCCGAG+CGG - chr1_1:9289374-9289393 Msa0006410:intron 30.0%
!! TGTATGTTTGGTTTCACTTT+TGG - chr1_1:9290272-9290291 Msa0006410:intron 30.0%
TACATTGATGTAAAAGTGAG+TGG + chr1_1:9290396-9290415 None:intergenic 30.0%
! CACATATCCATGAGATTTTA+TGG - chr1_1:9290520-9290539 Msa0006410:intron 30.0%
CTTCTAAGTAGTTAAACAGT+AGG - chr1_1:9290591-9290610 Msa0006410:intron 30.0%
!! GATTTTATATGCTTGGTAGT+TGG - chr1_1:9290759-9290778 Msa0006410:intron 30.0%
TTACACGCTGTACTTAATAT+CGG - chr1_1:9291128-9291147 Msa0006410:CDS 30.0%
! TCCATCAATTTTAAATCGGA+TGG - chr1_1:9291205-9291224 Msa0006410:CDS 30.0%
! ACCATCCGATTTAAAATTGA+TGG + chr1_1:9291209-9291228 None:intergenic 30.0%
ATAAACTATGGAAATGGAGT+CGG + chr1_1:9291265-9291284 None:intergenic 30.0%
ACTCCATTTCCATAGTTTAT+GGG - chr1_1:9291265-9291284 Msa0006410:CDS 30.0%
TATTACACAAACACTTGTGT+AGG + chr1_1:9291401-9291420 None:intergenic 30.0%
!! GCGTTTGAAATGCTTTATTT+GGG + chr1_1:9291426-9291445 None:intergenic 30.0%
ATATAACTTACATGATACCG+TGG + chr1_1:9291525-9291544 None:intergenic 30.0%
! TGGCATTTCAAGCAAATTTT+CGG - chr1_1:9291631-9291650 Msa0006410:intron 30.0%
ATGAAAAATGACAATGCAGT+GGG - chr1_1:9291938-9291957 Msa0006410:intron 30.0%
TGACAGTTATATGAAGGATA+GGG + chr1_1:9292074-9292093 None:intergenic 30.0%
ATGACAGTTATATGAAGGAT+AGG + chr1_1:9292075-9292094 None:intergenic 30.0%
ATATCATATCGATCCCTAAA+AGG + chr1_1:9292208-9292227 None:intergenic 30.0%
! TAACTTGATGGCATTATTCA+GGG - chr1_1:9292240-9292259 Msa0006410:CDS 30.0%
ACTTCAAAGATATGTGTCAT+CGG + chr1_1:9292300-9292319 None:intergenic 30.0%
TATTCATTCAATGGCTAACT+AGG + chr1_1:9292486-9292505 None:intergenic 30.0%
! TTACACTCTTATTGACTATC+TGG + chr1_1:9292521-9292540 None:intergenic 30.0%
TGTAATAAAGAAAACGGTGT+CGG + chr1_1:9292555-9292574 None:intergenic 30.0%
! GGAGGGATTTTTGTTAATAA+GGG - chr1_1:9292639-9292658 Msa0006410:CDS 30.0%
! GGATTTTTGTTAATAAGGGA+TGG - chr1_1:9292643-9292662 Msa0006410:CDS 30.0%
TTGTAATTCCAACTTTCCAA+GGG + chr1_1:9292718-9292737 None:intergenic 30.0%
TCTATATCTCTACTTGATGT+GGG + chr1_1:9292787-9292806 None:intergenic 30.0%
CATCAAATTAGAATTTCGCT+AGG + chr1_1:9292875-9292894 None:intergenic 30.0%
! GATATTTCTATGTAGGATCT+TGG + chr1_1:9292910-9292929 None:intergenic 30.0%
! ATATCAAAGTTTTTCCACCA+AGG - chr1_1:9292925-9292944 Msa0006410:intron 30.0%
GAAAAAAAACTCAAGAGGTT+AGG + chr1_1:9292960-9292979 None:intergenic 30.0%
!!! TTTCCTTTTGAGATTGAGTT+AGG - chr1_1:9292976-9292995 Msa0006410:intron 30.0%
TGTGCTTATAGTCATATCAT+AGG - chr1_1:9293165-9293184 Msa0006410:CDS 30.0%
TGTGAATTCATTGCTAATGT+AGG - chr1_1:9293435-9293454 Msa0006410:intron 30.0%
GTGAATTCATTGCTAATGTA+GGG - chr1_1:9293436-9293455 Msa0006410:intron 30.0%
TAAGTTAATCCAATCAGATC+AGG + chr1_1:9293509-9293528 None:intergenic 30.0%
! TGGATTAACTTACACACTTT+TGG - chr1_1:9293517-9293536 Msa0006410:intron 30.0%
!!! GCTCATTTTTTTCGTTTTCA+TGG - chr1_1:9293591-9293610 Msa0006410:intron 30.0%
TCATCAATTTGATGAAACTC+AGG + chr1_1:9293617-9293636 None:intergenic 30.0%
GCATATAATTTCTGTTCACT+TGG - chr1_1:9293676-9293695 Msa0006410:intron 30.0%
TAATTTCTGTTCACTTGGTT+TGG - chr1_1:9293681-9293700 Msa0006410:intron 30.0%
! CATTTTGAACTATCCTTTTG+AGG - chr1_1:9293884-9293903 Msa0006410:intron 30.0%
GTTTGAATCTTGAGTTTAAC+TGG - chr1_1:9293932-9293951 Msa0006410:intron 30.0%
TTATTCTTCTCTGTATTGGA+AGG + chr1_1:9294138-9294157 None:intergenic 30.0%
! AAATCCTTAATGCCAGTTTT+TGG - chr1_1:9294391-9294410 Msa0006410:intron 30.0%
AAGGACTGAAAAGGAAAAAT+AGG + chr1_1:9294482-9294501 None:intergenic 30.0%
ATATGACGTTTGCAATAAGT+TGG - chr1_1:9294642-9294661 Msa0006410:intron 30.0%
!!! CTGACATTTTTTCACTAAAC+AGG - chr1_1:9294749-9294768 Msa0006410:intron 30.0%
! TATTTTCTGCGTAATTGACA+CGG + chr1_1:9295195-9295214 None:intergenic 30.0%
TGTTTATCTCATATCAAGCA+TGG - chr1_1:9295232-9295251 Msa0006410:intron 30.0%
CTGGAAAAAATGGAATTTGA+TGG + chr1_1:9295339-9295358 None:intergenic 30.0%
!!! TTCCATTTTTTCCAGTGATT+TGG - chr1_1:9295344-9295363 Msa0006410:intron 30.0%
!!! TCCATTTTTTCCAGTGATTT+GGG - chr1_1:9295345-9295364 Msa0006410:intron 30.0%
TTCGTAATAACCAGATCAAA+AGG - chr1_1:9280714-9280733 Msa0006410:intron 30.0%
TGTAGAGCAGAAAAAAGATT+TGG + chr1_1:9295610-9295629 None:intergenic 30.0%
!!! AAATCTTTTTTCTGCTCTAC+AGG - chr1_1:9295609-9295628 Msa0006410:intron 30.0%
!!! GATCATTTACTTTTTCTACG+AGG - chr1_1:9295670-9295689 Msa0006410:intron 30.0%
AATCTTTCAGGCTGTTAAAA+TGG - chr1_1:9295730-9295749 Msa0006410:intron 30.0%
!! AACTCATTTGCTGTGTTAAA+AGG - chr1_1:9295788-9295807 Msa0006410:intron 30.0%
CTGATATTCCAATTTCTCAA+AGG - chr1_1:9295967-9295986 Msa0006410:intron 30.0%
!! GTTAGAAAAAGAGTGTTAGA+TGG + chr1_1:9296074-9296093 None:intergenic 30.0%
! TTTATGGAGTCTCACTATTT+TGG - chr1_1:9296121-9296140 Msa0006410:intron 30.0%
ATCTTTGAGTCTCACAAATT+TGG - chr1_1:9296160-9296179 Msa0006410:intron 30.0%
!! GTTACTCTGGTTTCATTTTT+CGG - chr1_1:9296595-9296614 Msa0006410:intron 30.0%
GTAATAATGACAGAATCTAC+AGG - chr1_1:9296703-9296722 Msa0006410:intron 30.0%
TAAACAAGGTCTACAATGAA+TGG - chr1_1:9297031-9297050 Msa0006410:intron 30.0%
! TCAGTTTTACTGTATTTGCA+AGG + chr1_1:9297327-9297346 None:intergenic 30.0%
!! TGTTTTACAGTGGTTTTTAG+GGG - chr1_1:9297371-9297390 Msa0006410:intron 30.0%
ATCGATATAAGTACCTGAAA+AGG - chr1_1:9297464-9297483 Msa0006410:intron 30.0%
TTCTATGCTGTTATTCTTCA+TGG - chr1_1:9297541-9297560 Msa0006410:intron 30.0%
! AACTTCCATAGTTTGTGAAT+TGG - chr1_1:9297703-9297722 Msa0006410:CDS 30.0%
GGCTAATTGTTACACATTCA+TGG - chr1_1:9275678-9275697 Msa0006410:three_prime_UTR 35.0%
TTTACCCTTAAATACGAGCT+AGG - chr1_1:9275713-9275732 Msa0006410:three_prime_UTR 35.0%
! CCTTCTTTATTTAAAGGAGG+GGG + chr1_1:9275858-9275877 None:intergenic 35.0%
! CCCTTCTTTATTTAAAGGAG+GGG + chr1_1:9275859-9275878 None:intergenic 35.0%
CCCCTCCTTTAAATAAAGAA+GGG - chr1_1:9275856-9275875 Msa0006410:CDS 35.0%
CACTATAAACTCGTGATAGA+AGG - chr1_1:9277115-9277134 Msa0006410:intron 35.0%
TTGTGAAGTTCCTCTAAATG+TGG + chr1_1:9277146-9277165 None:intergenic 35.0%
!! TATTTGACTTGTTGGAGACT+TGG - chr1_1:9277205-9277224 Msa0006410:intron 35.0%
CCGATAAAGAATCAAGGAAA+TGG + chr1_1:9277527-9277546 None:intergenic 35.0%
CATCATCCGATAAAGAATCA+AGG + chr1_1:9277533-9277552 None:intergenic 35.0%
GAGACGGAGAACAAATATAT+CGG + chr1_1:9277620-9277639 None:intergenic 35.0%
GACTTTCAGTCATGTTTCAT+AGG - chr1_1:9277665-9277684 Msa0006410:intron 35.0%
! GTCATGTTTCATAGGGTATT+TGG - chr1_1:9277673-9277692 Msa0006410:intron 35.0%
AAAGTCACAAACACTTTCGT+AGG + chr1_1:9277889-9277908 None:intergenic 35.0%
GTAGCTTGAAAGTTAATAGG+GGG + chr1_1:9277944-9277963 None:intergenic 35.0%
!! TGGCATTTCAAGTTCTTGTT+TGG - chr1_1:9278088-9278107 Msa0006410:intron 35.0%
! TTCAAGTTCTTGTTTGGACA+TGG - chr1_1:9278094-9278113 Msa0006410:intron 35.0%
GATCAGTTTATAGCGAAATG+TGG - chr1_1:9278131-9278150 Msa0006410:CDS 35.0%
TTAATTATCCATGAAGGGCA+AGG + chr1_1:9278290-9278309 None:intergenic 35.0%
CCTAAAAGGATGAAACTGAT+GGG + chr1_1:9278315-9278334 None:intergenic 35.0%
! CCATCAGTTTCATCCTTTTA+GGG - chr1_1:9278313-9278332 Msa0006410:CDS 35.0%
ACATCAAATCAGTCCCTAAA+AGG + chr1_1:9278329-9278348 None:intergenic 35.0%
! ACAACTAATTTGATGGCATG+AGG - chr1_1:9278356-9278375 Msa0006410:CDS 35.0%
TAAATGGAAGTCTTACCAGA+TGG - chr1_1:9278409-9278428 Msa0006410:CDS 35.0%
TCAAAGATAAATGTGCCATC+TGG + chr1_1:9278427-9278446 None:intergenic 35.0%
TAGGTAGAGTTGAAGTATGT+AGG - chr1_1:9278525-9278544 Msa0006410:intron 35.0%
! TTTGAGATCCCTCATGATAA+AGG + chr1_1:9278741-9278760 None:intergenic 35.0%
TTTATCATGAGGGATCTCAA+AGG - chr1_1:9278740-9278759 Msa0006410:intron 35.0%
TTATCATGAGGGATCTCAAA+GGG - chr1_1:9278741-9278760 Msa0006410:intron 35.0%
ACATTAGCAAGGAAATGACA+AGG + chr1_1:9278849-9278868 None:intergenic 35.0%
! TGTCATTTCCTTGCTAATGT+AGG - chr1_1:9278849-9278868 Msa0006410:intron 35.0%
GTCATTTCCTTGCTAATGTA+GGG - chr1_1:9278850-9278869 Msa0006410:intron 35.0%
!!! GCTTTTTTGTTTACTCGACT+TGG - chr1_1:9279050-9279069 Msa0006410:intron 35.0%
! AGGTGCTGTCTATTAAAGTT+TGG - chr1_1:9279142-9279161 Msa0006410:intron 35.0%
AGTCATACCAAACAAATCCA+AGG - chr1_1:9279303-9279322 Msa0006410:intron 35.0%
! TACTTTGCCTTGGATTTGTT+TGG + chr1_1:9279313-9279332 None:intergenic 35.0%
CTCAAACAAATACTTTGCCT+TGG + chr1_1:9279323-9279342 None:intergenic 35.0%
TTCAACCTTCAAATACAGTG+AGG - chr1_1:9279491-9279510 Msa0006410:intron 35.0%
CTATTCCTCACTGTATTTGA+AGG + chr1_1:9279499-9279518 None:intergenic 35.0%
GTGTAACCACTTTATCTATC+AGG - chr1_1:9279599-9279618 Msa0006410:intron 35.0%
CTTGAACCTGATAGATAAAG+TGG + chr1_1:9279608-9279627 None:intergenic 35.0%
!! ATCTATCAGGTTCAAGTTGA+AGG - chr1_1:9279612-9279631 Msa0006410:CDS 35.0%
ATGAAAACATCCAAGGAATG+TGG + chr1_1:9279724-9279743 None:intergenic 35.0%
GGTATGTATGAAAACATCCA+AGG + chr1_1:9279731-9279750 None:intergenic 35.0%
ATGAATTTACTGACGTGGAT+GGG + chr1_1:9280159-9280178 None:intergenic 35.0%
AATGAATTTACTGACGTGGA+TGG + chr1_1:9280160-9280179 None:intergenic 35.0%
GAGTAATGAATTTACTGACG+TGG + chr1_1:9280164-9280183 None:intergenic 35.0%
AGTACTAACGAATGGTAACT+GGG + chr1_1:9280273-9280292 None:intergenic 35.0%
TCACGAATTTCATCGAATTG+TGG - chr1_1:9280300-9280319 Msa0006410:intron 35.0%
AGTTGTTACTAGACTGAGAT+AGG + chr1_1:9280331-9280350 None:intergenic 35.0%
!! AAGAGTACTACCTCCAAAAA+CGG + chr1_1:9280379-9280398 None:intergenic 35.0%
TAATTTCTAACCTGCAAGAG+CGG + chr1_1:9280552-9280571 None:intergenic 35.0%
AAATGCATAACACAAAGGCA+AGG + chr1_1:9280587-9280606 None:intergenic 35.0%
!! ATTCCATTTTTCCAGTGGTT+TGG - chr1_1:9280627-9280646 Msa0006410:intron 35.0%
!! TTCCATTTTTCCAGTGGTTT+GGG - chr1_1:9280628-9280647 Msa0006410:intron 35.0%
GTAATAACCAGATCAAAAGG+TGG - chr1_1:9280717-9280736 Msa0006410:intron 35.0%
! CACATGTACTTTCCTTTTCT+AGG - chr1_1:9280759-9280778 Msa0006410:intron 35.0%
TTCTTGATTAGCATCACAGA+TGG - chr1_1:9280815-9280834 Msa0006410:intron 35.0%
ATGAGAAACAAACTGAAGTC+AGG + chr1_1:9280928-9280947 None:intergenic 35.0%
AACCTTTCAGGCTGTTATAT+TGG - chr1_1:9281013-9281032 Msa0006410:intron 35.0%
AGTTCCCTTGATGTGTTAAA+AGG - chr1_1:9281071-9281090 Msa0006410:intron 35.0%
! CACTCCTTTTAACACATCAA+GGG + chr1_1:9281078-9281097 None:intergenic 35.0%
! TCACTCCTTTTAACACATCA+AGG + chr1_1:9281079-9281098 None:intergenic 35.0%
GAGTTTCCACTACTATACAA+TGG - chr1_1:9281097-9281116 Msa0006410:intron 35.0%
CAAAAGCCATTGTATAGTAG+TGG + chr1_1:9281106-9281125 None:intergenic 35.0%
CTGATATTCCAATTCCTCAA+AGG - chr1_1:9281236-9281255 Msa0006410:CDS 35.0%
ATTCCAATTCCTCAAAGGAT+TGG - chr1_1:9281241-9281260 Msa0006410:CDS 35.0%
AATTACACTGGAGGAACATT+TGG + chr1_1:9281293-9281312 None:intergenic 35.0%
! TTCAACCAATGGAAGAGTAT+TGG - chr1_1:9281482-9281501 Msa0006410:intron 35.0%
TCTTTCCAATACTCTTCCAT+TGG + chr1_1:9281490-9281509 None:intergenic 35.0%
!! TTTTAGTTGATCTTATCCGG+AGG - chr1_1:9281640-9281659 Msa0006410:intron 35.0%
TTTAGTTGATCTTATCCGGA+GGG - chr1_1:9281641-9281660 Msa0006410:intron 35.0%
!!! TGTTGGACATTTTTTGCTAC+TGG + chr1_1:9281696-9281715 None:intergenic 35.0%
!! GTGCTTTGTTATTAGTCTGT+TGG + chr1_1:9281713-9281732 None:intergenic 35.0%
TTAGTACTAAAACCTCCACA+AGG - chr1_1:9281780-9281799 Msa0006410:intron 35.0%
TAGTACTAAAACCTCCACAA+GGG - chr1_1:9281781-9281800 Msa0006410:intron 35.0%
TTAGAACTTCTCTCTCTAAG+TGG + chr1_1:9282156-9282175 None:intergenic 35.0%
TTTCCTATTCATCTAAGTGG+TGG - chr1_1:9282212-9282231 Msa0006410:intron 35.0%
AAAAGAGAGAACAGAAAACC+AGG + chr1_1:9282295-9282314 None:intergenic 35.0%
TCTGGATCTAGATCTAGATT+CGG - chr1_1:9282327-9282346 Msa0006410:intron 35.0%
! TTCTGATGGATGTTTGGAAA+AGG - chr1_1:9282351-9282370 Msa0006410:intron 35.0%
! TCTGATGGATGTTTGGAAAA+GGG - chr1_1:9282352-9282371 Msa0006410:intron 35.0%
!! CTTTGAAACAATAACCCTTG+AGG + chr1_1:9282559-9282578 None:intergenic 35.0%
! TCTTGTTTACCATGTTCTAC+TGG - chr1_1:9282607-9282626 Msa0006410:intron 35.0%
AGCACAAGTAAAACAAGGAA+AGG + chr1_1:9282676-9282695 None:intergenic 35.0%
! TATTAACATCTTGGAAGCAC+AGG + chr1_1:9282749-9282768 None:intergenic 35.0%
!! TTAATTTGCCCCAAATGAGA+TGG - chr1_1:9282793-9282812 Msa0006410:intron 35.0%
! GTTACGGATTAAATAGGCTA+CGG + chr1_1:9282964-9282983 None:intergenic 35.0%
TAGCCTATTTAATCCGTAAC+TGG - chr1_1:9282964-9282983 Msa0006410:intron 35.0%
! TTCTCTCATTTTCGTTGTCA+TGG - chr1_1:9283007-9283026 Msa0006410:CDS 35.0%
AATCAAACCAAATGCCACAA+GGG + chr1_1:9283213-9283232 None:intergenic 35.0%
!!! GTCAGCTTTTTTTGATTGCA+TGG - chr1_1:9283517-9283536 Msa0006410:intron 35.0%
! TAAAGCATTAGGGGTAGTTT+AGG + chr1_1:9283666-9283685 None:intergenic 35.0%
! TGTTGATGTTGTGTTGATGA+AGG + chr1_1:9284212-9284231 None:intergenic 35.0%
! ATGAGATTGATGTGTTGTTG+TGG + chr1_1:9284247-9284266 None:intergenic 35.0%
! AGTTGTTGTTGTGTAGTTTC+TGG + chr1_1:9284278-9284297 None:intergenic 35.0%
ATTTATGAAGGAGGAAGAGA+GGG + chr1_1:9284305-9284324 None:intergenic 35.0%
!! TTGTTGCTGATTTATGAAGG+AGG + chr1_1:9284314-9284333 None:intergenic 35.0%
ATTAGAAAGGGTTAGGGATT+TGG + chr1_1:9284363-9284382 None:intergenic 35.0%
GAGTTTCTTGTTCAGATTGA+TGG + chr1_1:9284412-9284431 None:intergenic 35.0%
ATCTCACAAGAAACTCAATC+TGG - chr1_1:9284459-9284478 Msa0006410:intron 35.0%
TCTCACAAGAAACTCAATCT+GGG - chr1_1:9284460-9284479 Msa0006410:intron 35.0%
CAATCTGGGCAAGAAAAAAT+TGG - chr1_1:9284474-9284493 Msa0006410:intron 35.0%
ATCTGGGCAAGAAAAAATTG+GGG - chr1_1:9284476-9284495 Msa0006410:intron 35.0%
!!! TTTTGTTGTTGTTGAAGGAG+TGG - chr1_1:9284638-9284657 Msa0006410:intron 35.0%
GAGTGGAAAAGAAGAAGAAA+AGG - chr1_1:9284655-9284674 Msa0006410:intron 35.0%
AGAAGAAAAGGATGAAGAGA+AGG - chr1_1:9284667-9284686 Msa0006410:intron 35.0%
GAAGAAAAGGATGAAGAGAA+GGG - chr1_1:9284668-9284687 Msa0006410:intron 35.0%
!!! GTCAGCTTTTTTTGATTGCA+TGG + chr1_1:9283517-9283536 None:intergenic 35.0%
TGTACTTCGAGAAAACCATT+AGG - chr1_1:9285408-9285427 Msa0006410:intron 35.0%
GTACTTCGAGAAAACCATTA+GGG - chr1_1:9285409-9285428 Msa0006410:intron 35.0%
AAAAATGGGTCTTGATGGAA+CGG + chr1_1:9285554-9285573 None:intergenic 35.0%
CAAGTAAAAATGGGTCTTGA+TGG + chr1_1:9285559-9285578 None:intergenic 35.0%
TGGGTATGTCAAAATTGTGT+AGG - chr1_1:9285594-9285613 Msa0006410:intron 35.0%
GTATGTCAAAATTGTGTAGG+TGG - chr1_1:9285597-9285616 Msa0006410:intron 35.0%
TTTGTAAATACCACTAGGAC+CGG - chr1_1:9285761-9285780 Msa0006410:intron 35.0%
!! ACAACAAATAAGGGCGTTTA+CGG + chr1_1:9286249-9286268 None:intergenic 35.0%
GGAACGTAATAATAGAAGTG+TGG - chr1_1:9286330-9286349 Msa0006410:intron 35.0%
ACAACTTCTTGAAACATAGG+GGG + chr1_1:9286399-9286418 None:intergenic 35.0%
CACAACTTCTTGAAACATAG+GGG + chr1_1:9286400-9286419 None:intergenic 35.0%
! TTGATCAAAATTGGCCTAGA+GGG + chr1_1:9286490-9286509 None:intergenic 35.0%
!! AGCATTGACTTGGTCAAAAT+TGG - chr1_1:9286640-9286659 Msa0006410:intron 35.0%
! ACTTGGTCAAAATTGGTCTA+GGG - chr1_1:9286647-9286666 Msa0006410:intron 35.0%
! GTTTACTGAAGTTGCGATTT+TGG + chr1_1:9286735-9286754 None:intergenic 35.0%
ATCGCAACTTCAGTAAACAT+AGG - chr1_1:9286737-9286756 Msa0006410:intron 35.0%
TCGCAACTTCAGTAAACATA+GGG - chr1_1:9286738-9286757 Msa0006410:intron 35.0%
AAGCAACCAGATTGAAACAT+GGG - chr1_1:9287143-9287162 Msa0006410:intron 35.0%
CGCCTCTTTCTTGAAAATTA+TGG - chr1_1:9287202-9287221 Msa0006410:intron 35.0%
ATTATGGACAAAGTGGGAAT+AGG - chr1_1:9287218-9287237 Msa0006410:intron 35.0%
!! GAATGGGTAAGTGTTGAATA+TGG - chr1_1:9287337-9287356 Msa0006410:intron 35.0%
! CGGAAAGCATATTTGTGTAT+CGG - chr1_1:9287400-9287419 Msa0006410:intron 35.0%
! ATATGAAAACTAGCTTCCGA+CGG + chr1_1:9287540-9287559 None:intergenic 35.0%
GTATTATTATATGCAGGGGT+CGG + chr1_1:9288032-9288051 None:intergenic 35.0%
GTGAGCATAACTCAGTTAAT+AGG + chr1_1:9288060-9288079 None:intergenic 35.0%
TTAACTGAGTTATGCTCACA+AGG - chr1_1:9288061-9288080 Msa0006410:intron 35.0%
AGTATGCCGTATTTCATATC+GGG - chr1_1:9288089-9288108 Msa0006410:intron 35.0%
ATGTACAAAGCCTACAAAAG+AGG - chr1_1:9288236-9288255 Msa0006410:intron 35.0%
!! ATTGTGGGTCGTTTGTTATA+AGG + chr1_1:9288278-9288297 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr1_1:9288390-9288409 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr1_1:9288401-9288420 None:intergenic 35.0%
CAAGCGGATAGGAATAAAAT+TGG + chr1_1:9288474-9288493 None:intergenic 35.0%
AAAAAAAAAGGCAAGCGGAT+AGG + chr1_1:9288485-9288504 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr1_1:9288401-9288420 None:intergenic 35.0%
AAAAAAAAAGGCAAGCGGAT+AGG + chr1_1:9288485-9288504 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr1_1:9288390-9288409 None:intergenic 35.0%
! AACCTAATTTGCAAATGAGC+GGG + chr1_1:9289048-9289067 None:intergenic 35.0%
AAAAGAAAAGGCAAGAGGAT+AGG + chr1_1:9289128-9289147 None:intergenic 35.0%
CTTCAAAAAGAAAAGGCAAG+AGG + chr1_1:9289133-9289152 None:intergenic 35.0%
TTCTTTACAATAAACCCGAG+CGG - chr1_1:9289581-9289600 Msa0006410:intron 35.0%
AAAATCTAGTCAAACCGAAC+AGG - chr1_1:9289614-9289633 Msa0006410:intron 35.0%
AAATCTAGTCAAACCGAACA+GGG - chr1_1:9289615-9289634 Msa0006410:intron 35.0%
!!! TTTTTTGCTTAACCCCTGTT+CGG + chr1_1:9289631-9289650 None:intergenic 35.0%
!!! TTGTTTTTTAGGTGCTTCCT+GGG + chr1_1:9289801-9289820 None:intergenic 35.0%
!!! TTTGTTTTTTAGGTGCTTCC+TGG + chr1_1:9289802-9289821 None:intergenic 35.0%
!! AGGAAGCACCTAAAAAACAA+AGG - chr1_1:9289801-9289820 Msa0006410:intron 35.0%
!! GATGCATTCATTCTGAAACT+GGG - chr1_1:9289844-9289863 Msa0006410:intron 35.0%
ACTTTGATCGCTGATGATTA+TGG - chr1_1:9290079-9290098 Msa0006410:intron 35.0%
!! ATGTTTGGTTTCACTTTTGG+AGG - chr1_1:9290275-9290294 Msa0006410:intron 35.0%
!! TGTTTGGTTTCACTTTTGGA+GGG - chr1_1:9290276-9290295 Msa0006410:intron 35.0%
TATGTGTTTGTTTGATGCTG+CGG + chr1_1:9290506-9290525 None:intergenic 35.0%
! GTTTGCTACATTGCACAATA+AGG + chr1_1:9290653-9290672 None:intergenic 35.0%
! GATGGTGTTTTCATATTCAC+AGG + chr1_1:9290800-9290819 None:intergenic 35.0%
CAGCATCCAATAAAGAATCA+AGG + chr1_1:9290840-9290859 None:intergenic 35.0%
TTCTCTTTATGCTCATTGTC+CGG + chr1_1:9290874-9290893 None:intergenic 35.0%
TTCATAATGTAGGAGCTGTT+TGG - chr1_1:9291000-9291019 Msa0006410:intron 35.0%
ACCATCTGATCTCAAATCAA+TGG + chr1_1:9291154-9291173 None:intergenic 35.0%
! AATTTTAAATCGGATGGTCG+AGG - chr1_1:9291211-9291230 Msa0006410:CDS 35.0%
GACTCCATTTCCATAGTTTA+TGG - chr1_1:9291264-9291283 Msa0006410:CDS 35.0%
ACACCCATAAACTATGGAAA+TGG + chr1_1:9291271-9291290 None:intergenic 35.0%
GAGTTTACACCCATAAACTA+TGG + chr1_1:9291277-9291296 None:intergenic 35.0%
! GGCGTTTGAAATGCTTTATT+TGG + chr1_1:9291427-9291446 None:intergenic 35.0%
AGAGACATGTCATTATCATC+CGG - chr1_1:9291480-9291499 Msa0006410:intron 35.0%
AATTGAAAGAAGACATGCTC+CGG + chr1_1:9291502-9291521 None:intergenic 35.0%
CATGTCTTCTTTCAATTCCA+CGG - chr1_1:9291505-9291524 Msa0006410:intron 35.0%
! TTCAAGCAAATTTTCGGACA+TGG - chr1_1:9291637-9291656 Msa0006410:intron 35.0%
! AGAATTGAAAGCATATCCCT+TGG + chr1_1:9291701-9291720 None:intergenic 35.0%
TTTGTATGTTGCTGTACTTC+TGG + chr1_1:9291861-9291880 None:intergenic 35.0%
GATGAAAAATGACAATGCAG+TGG - chr1_1:9291937-9291956 Msa0006410:intron 35.0%
TGAAAAATGACAATGCAGTG+GGG - chr1_1:9291939-9291958 Msa0006410:intron 35.0%
GGGAAATGACAGTTATATGA+AGG + chr1_1:9292080-9292099 None:intergenic 35.0%
GAAACTGATGGGATTATGTT+AGG + chr1_1:9292183-9292202 None:intergenic 35.0%
CCTAAAAGGATGAAACTGAT+GGG + chr1_1:9278315-9278334 None:intergenic 35.0%
! CCATCAGTTTCATCCTTTTA+GGG - chr1_1:9278313-9278332 Msa0006410:CDS 35.0%
CACTGTAAGAACTAACTTGA+TGG - chr1_1:9292228-9292247 Msa0006410:CDS 35.0%
! CTAACTTGATGGCATTATTC+AGG - chr1_1:9292239-9292258 Msa0006410:CDS 35.0%
CTTCAAAGATATGTGTCATC+GGG + chr1_1:9292299-9292318 None:intergenic 35.0%
!! CATATCTTTGAAGTCCAAAG+TGG - chr1_1:9292306-9292325 Msa0006410:CDS 35.0%
! AAGTCCAAAGTGGACATTTT+CGG - chr1_1:9292316-9292335 Msa0006410:CDS 35.0%
AAATCCGAAAATGTCCACTT+TGG + chr1_1:9292323-9292342 None:intergenic 35.0%
! GGGAGGGATTTTTGTTAATA+AGG - chr1_1:9292638-9292657 Msa0006410:CDS 35.0%
CTTGTAATTCCAACTTTCCA+AGG + chr1_1:9292719-9292738 None:intergenic 35.0%
CTTGGAAAGTTGGAATTACA+AGG - chr1_1:9292717-9292736 Msa0006410:intron 35.0%
GTCTATATCTCTACTTGATG+TGG + chr1_1:9292788-9292807 None:intergenic 35.0%
TAATACATAAGCTAGCTCGA+TGG + chr1_1:9292846-9292865 None:intergenic 35.0%
GACATTAGGTTACTCAAGTA+AGG - chr1_1:9293275-9293294 Msa0006410:intron 35.0%
TACATTGTTCCTCCTTTATC+AGG - chr1_1:9293315-9293334 Msa0006410:intron 35.0%
ACATTGTTCCTCCTTTATCA+GGG - chr1_1:9293316-9293335 Msa0006410:intron 35.0%
!! GCAGTGAACTTTTTGATTAC+TGG - chr1_1:9293357-9293376 Msa0006410:intron 35.0%
! TTTGAAACTCCTGATCTGAT+TGG - chr1_1:9293497-9293516 Msa0006410:intron 35.0%
CAAATAGGGGTAAAAAACGT+GGG + chr1_1:9293567-9293586 None:intergenic 35.0%
AAAAATGAGCCTGGCAAATA+GGG + chr1_1:9293581-9293600 None:intergenic 35.0%
AAAAAATGAGCCTGGCAAAT+AGG + chr1_1:9293582-9293601 None:intergenic 35.0%
GAAAACGAAAAAAATGAGCC+TGG + chr1_1:9293590-9293609 None:intergenic 35.0%
ATCATTTGCTTAGCTAGTGT+GGG + chr1_1:9293744-9293763 None:intergenic 35.0%
TATCATTTGCTTAGCTAGTG+TGG + chr1_1:9293745-9293764 None:intergenic 35.0%
TTGAGTAAAGTGGTATGTCA+TGG - chr1_1:9293989-9294008 Msa0006410:intron 35.0%
TGAGTAAAGTGGTATGTCAT+GGG - chr1_1:9293990-9294009 Msa0006410:intron 35.0%
TTGATATCAAGCTCAAGCTA+AGG + chr1_1:9294248-9294267 None:intergenic 35.0%
TATGCAGCTAACAAGACTAT+CGG + chr1_1:9294275-9294294 None:intergenic 35.0%
TGATTGGACAAATTCTCCAT+TGG + chr1_1:9294328-9294347 None:intergenic 35.0%
ATGAAAACATCCAAGGAATG+TGG + chr1_1:9279724-9279743 None:intergenic 35.0%
GGTATGAATGAAAACATCCA+AGG + chr1_1:9294461-9294480 None:intergenic 35.0%
GATGGATATAAGGACTGAAA+AGG + chr1_1:9294491-9294510 None:intergenic 35.0%
TTTCAGTCCTTATATCCATC+CGG - chr1_1:9294491-9294510 Msa0006410:intron 35.0%
ACTAAAGTGGATGGTAACTT+GGG + chr1_1:9294881-9294900 None:intergenic 35.0%
TACTAAAGTGGATGGTAACT+TGG + chr1_1:9294882-9294901 None:intergenic 35.0%
TCACGAATTGCATCATATTG+TGG - chr1_1:9295029-9295048 Msa0006410:intron 35.0%
AGTTACAACTTATGATGTCG+AGG - chr1_1:9295070-9295089 Msa0006410:intron 35.0%
!! AAGAGTACTACCTCCAAAAA+CGG + chr1_1:9280379-9280398 None:intergenic 35.0%
!! TTTTTGGAGGTAGTACTCTT+AGG - chr1_1:9280379-9280398 Msa0006410:intron 35.0%
!!! CCATTTTTTCCAGTGATTTG+GGG - chr1_1:9295346-9295365 Msa0006410:intron 35.0%
!!! CATTTTTTCCAGTGATTTGG+GGG - chr1_1:9295347-9295366 Msa0006410:intron 35.0%
CATATCTTCTTTAGCAGCAT+GGG + chr1_1:9295392-9295411 None:intergenic 35.0%
TCATATCTTCTTTAGCAGCA+TGG + chr1_1:9295393-9295412 None:intergenic 35.0%
TGCTAAAGAAGATATGACTG+TGG - chr1_1:9295396-9295415 Msa0006410:CDS 35.0%
GTAATAACCAGATCAAAAGG+TGG - chr1_1:9280717-9280736 Msa0006410:intron 35.0%
TTCTTACTTTGCATCACAGA+TGG - chr1_1:9295532-9295551 Msa0006410:intron 35.0%
!!! TTTTTTCTATGTTCTGGGTC+TGG + chr1_1:9295770-9295789 None:intergenic 35.0%
! CTATACAATGCCTTTCAAGT+TGG - chr1_1:9295826-9295845 Msa0006410:intron 35.0%
TGTGTGTTCATGTTACTCAA+AGG - chr1_1:9295938-9295957 Msa0006410:intron 35.0%
! ATGTCAAGCCTTTGAGAAAT+TGG + chr1_1:9295978-9295997 None:intergenic 35.0%
!!! CCATTTTGGTTGATCTTGTT+CGG - chr1_1:9296355-9296374 Msa0006410:intron 35.0%
! TTTTACAACTGACGTACTAC+TGG + chr1_1:9296403-9296422 None:intergenic 35.0%
CACATCCAGATATATCATTC+TGG - chr1_1:9296448-9296467 Msa0006410:intron 35.0%
!!! CACTGTTTTGAAAAGTCTGT+AGG - chr1_1:9296623-9296642 Msa0006410:intron 35.0%
CAACTAAAGCAATCGAAAGA+TGG - chr1_1:9296747-9296766 Msa0006410:intron 35.0%
ATGGTGAAAACTACATTTCG+AGG - chr1_1:9296766-9296785 Msa0006410:intron 35.0%
TGGTGAAAACTACATTTCGA+GGG - chr1_1:9296767-9296786 Msa0006410:intron 35.0%
TCTCAATTACGCTTTGTAAC+AGG - chr1_1:9296970-9296989 Msa0006410:intron 35.0%
TACACTAGTGACAGGTATAA+TGG - chr1_1:9297068-9297087 Msa0006410:intron 35.0%
!!! AGTTGTGCTTTGTTTTACAG+TGG - chr1_1:9297361-9297380 Msa0006410:intron 35.0%
AAGTTCACCAAAAGCTTGTA+TGG - chr1_1:9297595-9297614 Msa0006410:intron 35.0%
CCATTCCAATTCACAAACTA+TGG + chr1_1:9297711-9297730 None:intergenic 35.0%
! CCATAGTTTGTGAATTGGAA+TGG - chr1_1:9297708-9297727 Msa0006410:CDS 35.0%
AGTGAATTTATCCAACTTGC+AGG - chr1_1:9297751-9297770 Msa0006410:CDS 35.0%
GTGAATTTATCCAACTTGCA+GGG - chr1_1:9297752-9297771 Msa0006410:CDS 35.0%
TGAATTTATCCAACTTGCAG+GGG - chr1_1:9297753-9297772 Msa0006410:CDS 35.0%
GTTGTTCAAGTGACAACTGA+TGG - chr1_1:9275227-9275246 Msa0006410:three_prime_UTR 40.0%
AGCATAGGGATGATACGAAT+CGG + chr1_1:9275255-9275274 None:intergenic 40.0%
GACACCTAGCTCGTATTTAA+GGG + chr1_1:9275720-9275739 None:intergenic 40.0%
TGACACCTAGCTCGTATTTA+AGG + chr1_1:9275721-9275740 None:intergenic 40.0%
TAAATACGAGCTAGGTGTCA+AGG - chr1_1:9275721-9275740 Msa0006410:three_prime_UTR 40.0%
AATCTTACTCGTAGCGTTTG+TGG - chr1_1:9275803-9275822 Msa0006410:CDS 40.0%
CCCCCTCCTTTAAATAAAGA+AGG - chr1_1:9275855-9275874 Msa0006410:CDS 40.0%
! TACCCTAGTCTCGTTCTTTT+TGG - chr1_1:9276585-9276604 Msa0006410:CDS 40.0%
TGCCAAAAAGAACGAGACTA+GGG + chr1_1:9276590-9276609 None:intergenic 40.0%
!! TCTCGTTCTTTTTGGCAGTT+GGG - chr1_1:9276593-9276612 Msa0006410:intron 40.0%
ATCATGTCTGTATGCTCACA+TGG - chr1_1:9276661-9276680 Msa0006410:intron 40.0%
! AGTTTTACCGTGCGAAATAG+AGG - chr1_1:9277329-9277348 Msa0006410:intron 40.0%
!! GCAAACTTTGAAACAGCCTT+TGG + chr1_1:9278068-9278087 None:intergenic 40.0%
! AAGGCTGTTTCAAAGTTTGC+TGG - chr1_1:9278068-9278087 Msa0006410:intron 40.0%
! CCCATCAGTTTCATCCTTTT+AGG - chr1_1:9278312-9278331 Msa0006410:CDS 40.0%
CCCTAAAAGGATGAAACTGA+TGG + chr1_1:9278316-9278335 None:intergenic 40.0%
! ATGGCATGAGGCATTAATGA+AGG - chr1_1:9278368-9278387 Msa0006410:CDS 40.0%
! TGGCATGAGGCATTAATGAA+GGG - chr1_1:9278369-9278388 Msa0006410:CDS 40.0%
GTATCAGTAAAGGTCCACTT+TGG + chr1_1:9278453-9278472 None:intergenic 40.0%
TGATAAAGGAGGGATGTAAG+CGG + chr1_1:9278727-9278746 None:intergenic 40.0%
TACATCCCTCCTTTATCATG+AGG - chr1_1:9278729-9278748 Msa0006410:intron 40.0%
ACATCCCTCCTTTATCATGA+GGG - chr1_1:9278730-9278749 Msa0006410:intron 40.0%
AGATCCCTCATGATAAAGGA+GGG + chr1_1:9278737-9278756 None:intergenic 40.0%
TTCAAAGCCCTACATTAGCA+AGG + chr1_1:9278860-9278879 None:intergenic 40.0%
! TTGCTAATGTAGGGCTTTGA+AGG - chr1_1:9278859-9278878 Msa0006410:intron 40.0%
AAAATGAGCCAGGCTTGAAA+GGG + chr1_1:9278950-9278969 None:intergenic 40.0%
AGAGATGTATGAAGAGGGAT+AGG - chr1_1:9279122-9279141 Msa0006410:intron 40.0%
!!! GAGGCGATTTTTTCTTGGAT+TGG - chr1_1:9279250-9279269 Msa0006410:intron 40.0%
TTGAGTGAAGTAGCATACTG+TGG - chr1_1:9279338-9279357 Msa0006410:intron 40.0%
TGAGTGAAGTAGCATACTGT+GGG - chr1_1:9279339-9279358 Msa0006410:intron 40.0%
TTTACTGGACTTGTCACCAA+TGG - chr1_1:9279569-9279588 Msa0006410:intron 40.0%
TGGTTACACGAATTCTCCAT+TGG + chr1_1:9279588-9279607 None:intergenic 40.0%
! TCAGCCCAAAAGTAGCATTT+TGG + chr1_1:9279662-9279681 None:intergenic 40.0%
CATATAGACCAAGAAGAGCT+CGG + chr1_1:9280067-9280086 None:intergenic 40.0%
TCTATATGTCCTGCAATGCT+TGG - chr1_1:9280079-9280098 Msa0006410:intron 40.0%
CAGTACTAACGAATGGTAAC+TGG + chr1_1:9280274-9280293 None:intergenic 40.0%
ACAGTTGCAGTACTAACGAA+TGG + chr1_1:9280281-9280300 None:intergenic 40.0%
AACTTATGATGTTGAGGCTG+TGG - chr1_1:9280347-9280366 Msa0006410:intron 40.0%
GGAGGTAGTACTCTTATCTT+AGG - chr1_1:9280384-9280403 Msa0006410:intron 40.0%
!! TCCATTTTTCCAGTGGTTTG+GGG - chr1_1:9280629-9280648 Msa0006410:intron 40.0%
ATCAAAAGGTGGCAAGCAAT+AGG - chr1_1:9280728-9280747 Msa0006410:intron 40.0%
TCAAAAGGTGGCAAGCAATA+GGG - chr1_1:9280729-9280748 Msa0006410:intron 40.0%
TGGCATATAAGATGACCACT+GGG + chr1_1:9280873-9280892 None:intergenic 40.0%
TTGGCATATAAGATGACCAC+TGG + chr1_1:9280874-9280893 None:intergenic 40.0%
TGCAGAGCTGAGAAAAGATT+TGG + chr1_1:9280893-9280912 None:intergenic 40.0%
! AAATCTTTTCTCAGCTCTGC+AGG - chr1_1:9280892-9280911 Msa0006410:intron 40.0%
AGCCAATATAACAGCCTGAA+AGG + chr1_1:9281018-9281037 None:intergenic 40.0%
! GGCTGTTATATTGGCTATCA+TGG - chr1_1:9281022-9281041 Msa0006410:intron 40.0%
!! GGGAACTATTTCTGTGTTCT+AGG + chr1_1:9281058-9281077 None:intergenic 40.0%
TATGCGCTCTTGTTACTCAA+AGG - chr1_1:9281207-9281226 Msa0006410:intron 40.0%
! ATGCCAATCCTTTGAGGAAT+TGG + chr1_1:9281247-9281266 None:intergenic 40.0%
TAGCAAGAGAATTACACTGG+AGG + chr1_1:9281302-9281321 None:intergenic 40.0%
TGCTAGCAAGAGAATTACAC+TGG + chr1_1:9281305-9281324 None:intergenic 40.0%
TGCTAGCATTTATCTTCTCG+AGG - chr1_1:9281317-9281336 Msa0006410:CDS 40.0%
AGTACTAAAACCTCCACAAG+GGG - chr1_1:9281782-9281801 Msa0006410:intron 40.0%
GCATTATGTTTACAACCTGC+AGG - chr1_1:9281975-9281994 Msa0006410:intron 40.0%
! GTATTGATGACAGAATCTGC+AGG - chr1_1:9282027-9282046 Msa0006410:CDS 40.0%
GGGTTTCCTATTCATCTAAG+TGG - chr1_1:9282209-9282228 Msa0006410:intron 40.0%
AGACCACCACTTAGATGAAT+AGG + chr1_1:9282218-9282237 None:intergenic 40.0%
! GATCTAGATTCGGTTTCTGA+TGG - chr1_1:9282337-9282356 Msa0006410:intron 40.0%
! TTCGGTTTCTGATGGATGTT+TGG - chr1_1:9282345-9282364 Msa0006410:intron 40.0%
! AGAAACTATGGTAGTGAAGG+GGG + chr1_1:9282406-9282425 None:intergenic 40.0%
! GAGAAACTATGGTAGTGAAG+GGG + chr1_1:9282407-9282426 None:intergenic 40.0%
! GGAGAAACTATGGTAGTGAA+GGG + chr1_1:9282408-9282427 None:intergenic 40.0%
! AGGAGAAACTATGGTAGTGA+AGG + chr1_1:9282409-9282428 None:intergenic 40.0%
GCAACAGCACAAGTAAAACA+AGG + chr1_1:9282681-9282700 None:intergenic 40.0%
GACAACATCCATCTCATTTG+GGG + chr1_1:9282804-9282823 None:intergenic 40.0%
CGACAACATCCATCTCATTT+GGG + chr1_1:9282805-9282824 None:intergenic 40.0%
TCGACAACATCCATCTCATT+TGG + chr1_1:9282806-9282825 None:intergenic 40.0%
ATGGATGTTGTCGAGAAAGA+AGG - chr1_1:9282812-9282831 Msa0006410:intron 40.0%
ATGTTGTCGAGAAAGAAGGA+AGG - chr1_1:9282816-9282835 Msa0006410:intron 40.0%
CTTGGAAGAGAAATGGATCA+AGG + chr1_1:9282886-9282905 None:intergenic 40.0%
AAGCTCAGTTCGACTATAAG+TGG + chr1_1:9282937-9282956 None:intergenic 40.0%
CTGGATAGATGTTAAGACTG+TGG - chr1_1:9282983-9283002 Msa0006410:intron 40.0%
AGATGTTGGATGAGCAAAAC+CGG - chr1_1:9283071-9283090 Msa0006410:intron 40.0%
CAATCAAACCAAATGCCACA+AGG + chr1_1:9283214-9283233 None:intergenic 40.0%
CATTTATCCCCCTGCTATAT+GGG - chr1_1:9283392-9283411 Msa0006410:intron 40.0%
ATTTATCCCCCTGCTATATG+GGG - chr1_1:9283393-9283412 Msa0006410:intron 40.0%
! TGATGTTGTGTTGATGAAGG+AGG + chr1_1:9284209-9284228 None:intergenic 40.0%
GATTTATGAAGGAGGAAGAG+AGG + chr1_1:9284306-9284325 None:intergenic 40.0%
TTTGGAAAGGGAAGAAGAAG+AGG + chr1_1:9284345-9284364 None:intergenic 40.0%
AAGGGTTAGGGATTTGGAAA+GGG + chr1_1:9284357-9284376 None:intergenic 40.0%
AAAGGGTTAGGGATTTGGAA+AGG + chr1_1:9284358-9284377 None:intergenic 40.0%
!! TTGGGGATTTTAGGGATTTG+AGG - chr1_1:9284493-9284512 Msa0006410:intron 40.0%
AAAAGGATGAAGAGAAGGGA+AGG - chr1_1:9284672-9284691 Msa0006410:intron 40.0%
GAAGGAGGAAAAGAAGGATA+CGG - chr1_1:9284690-9284709 Msa0006410:intron 40.0%
ACAGGAAAGACAAACTACAC+TGG - chr1_1:9285043-9285062 Msa0006410:intron 40.0%
TGCTCAAGGTCTACAATGAA+TGG - chr1_1:9285087-9285106 Msa0006410:intron 40.0%
TGTCATTATACCTGTCACTC+GGG + chr1_1:9285129-9285148 None:intergenic 40.0%
CTGTCATTATACCTGTCACT+CGG + chr1_1:9285130-9285149 None:intergenic 40.0%
CGACCTAAATCCACTTGAAA+TGG - chr1_1:9285169-9285188 Msa0006410:intron 40.0%
! GCACCATTTCAAGTGGATTT+AGG + chr1_1:9285175-9285194 None:intergenic 40.0%
ACGATTACCAAGTACACGTA+TGG - chr1_1:9285520-9285539 Msa0006410:intron 40.0%
!! AGAGGTGTTCAAATCCAAAC+CGG - chr1_1:9285657-9285676 Msa0006410:intron 40.0%
!! AAATTGCATGCGATTCGGTT+TGG + chr1_1:9286178-9286197 None:intergenic 40.0%
CACTCAAAATCGGTCCAAAT+CGG - chr1_1:9286222-9286241 Msa0006410:intron 40.0%
! CTTGATCAAAATTGGCCTAG+AGG + chr1_1:9286491-9286510 None:intergenic 40.0%
TGATCAAGTCAATGTTGACG+TGG - chr1_1:9286503-9286522 Msa0006410:intron 40.0%
! GACTTGGTCAAAATTGGTCT+AGG - chr1_1:9286646-9286665 Msa0006410:intron 40.0%
! CTTGGTCAAAATTGGTCTAG+GGG - chr1_1:9286648-9286667 Msa0006410:intron 40.0%
! TTGGTCAAAATTGGTCTAGG+GGG - chr1_1:9286649-9286668 Msa0006410:intron 40.0%
TGCAAAGGGAGCAAAACATA+GGG - chr1_1:9286679-9286698 Msa0006410:intron 40.0%
CGCAACTTCAGTAAACATAG+GGG - chr1_1:9286739-9286758 Msa0006410:intron 40.0%
GCAACTTCAGTAAACATAGG+GGG - chr1_1:9286740-9286759 Msa0006410:intron 40.0%
AACCAAACTGTTAAGCAGCA+AGG - chr1_1:9287056-9287075 Msa0006410:intron 40.0%
! TTCCTTGCTGCTTAACAGTT+TGG + chr1_1:9287061-9287080 None:intergenic 40.0%
AGCAAGGAATGAGTGGAAAT+TGG - chr1_1:9287072-9287091 Msa0006410:intron 40.0%
TGGAATAAGGTATGTCCAAG+AGG - chr1_1:9287092-9287111 Msa0006410:intron 40.0%
TGGTTGCTTGTGTTACCTAT+AGG + chr1_1:9287132-9287151 None:intergenic 40.0%
CAAGCAACCAGATTGAAACA+TGG - chr1_1:9287142-9287161 Msa0006410:intron 40.0%
GGTTTACCCATGTTTCAATC+TGG + chr1_1:9287152-9287171 None:intergenic 40.0%
CATTTGTACCTACCTTGAGA+CGG + chr1_1:9287173-9287192 None:intergenic 40.0%
AGTATCAACATCAACGATGG+GGG + chr1_1:9287300-9287319 None:intergenic 40.0%
CAGTATCAACATCAACGATG+GGG + chr1_1:9287301-9287320 None:intergenic 40.0%
CCAGTATCAACATCAACGAT+GGG + chr1_1:9287302-9287321 None:intergenic 40.0%
CCATCGTTGATGTTGATACT+GGG - chr1_1:9287300-9287319 Msa0006410:intron 40.0%
AGTAAACTTCAAGATGGCAG+TGG - chr1_1:9287367-9287386 Msa0006410:intron 40.0%
ATGGCAGTGGACAACATTTA+CGG - chr1_1:9287380-9287399 Msa0006410:intron 40.0%
GGAGTTACTCTTAGCTAAGA+CGG - chr1_1:9287512-9287531 Msa0006410:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr1_1:9288397-9288416 Msa0006410:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr1_1:9288397-9288416 Msa0006410:intron 40.0%
CAAGCGGATAGGAATGAAAT+TGG + chr1_1:9288758-9288777 None:intergenic 40.0%
TTCCCGCTCATTTGCAAATT+AGG - chr1_1:9289043-9289062 Msa0006410:intron 40.0%
AATCTAGTCAAACCGAACAG+GGG - chr1_1:9289616-9289635 Msa0006410:intron 40.0%
AGCACCTAAAAAACAAAGGC+TGG - chr1_1:9289805-9289824 Msa0006410:intron 40.0%
GTTTCAGAATGAATGCATCG+CGG + chr1_1:9289843-9289862 None:intergenic 40.0%
!! CGATGCATTCATTCTGAAAC+TGG - chr1_1:9289843-9289862 Msa0006410:intron 40.0%
!! TTTCATGTCGATTTCCGTAG+AGG - chr1_1:9289878-9289897 Msa0006410:intron 40.0%
!! TTCATGTCGATTTCCGTAGA+GGG - chr1_1:9289879-9289898 Msa0006410:intron 40.0%
!! TTCGTACTTTAGGGCATGAT+TGG + chr1_1:9289959-9289978 None:intergenic 40.0%
! CTGATGATTATGGCTCTGTT+TGG - chr1_1:9290089-9290108 Msa0006410:intron 40.0%
!! ACCTTCAACTCACTTTTAGC+CGG - chr1_1:9290436-9290455 Msa0006410:intron 40.0%
!! GAAATTGACAAGCTCTGAGA+TGG + chr1_1:9290818-9290837 None:intergenic 40.0%
!! GCCATTGATTTGAGATCAGA+TGG - chr1_1:9291150-9291169 Msa0006410:CDS 40.0%
!! TCTTTCCTTTGAAGTGCCAA+AGG - chr1_1:9291592-9291611 Msa0006410:intron 40.0%
!! GCAAACTTTGAAACAGCCTT+TGG + chr1_1:9278068-9278087 None:intergenic 40.0%
! AAGGCTGTTTCAAAGTTTGC+TGG - chr1_1:9278068-9278087 Msa0006410:intron 40.0%
GATCAGCTCATAGCAAAATG+TGG - chr1_1:9291674-9291693 Msa0006410:intron 40.0%
TCATAGCAAAATGTGGTCCA+AGG - chr1_1:9291681-9291700 Msa0006410:intron 40.0%
CATAGCAAAATGTGGTCCAA+GGG - chr1_1:9291682-9291701 Msa0006410:intron 40.0%
AGAGAAAGTCCTTTCTCTGA+AGG + chr1_1:9291998-9292017 None:intergenic 40.0%
CAGTTACGACCTAAAGGTTT+GGG + chr1_1:9292022-9292041 None:intergenic 40.0%
TCAGTTACGACCTAAAGGTT+TGG + chr1_1:9292023-9292042 None:intergenic 40.0%
ACTGTTCAGTTACGACCTAA+AGG + chr1_1:9292028-9292047 None:intergenic 40.0%
AAGGATAGGGATAGCAATAG+AGG + chr1_1:9292061-9292080 None:intergenic 40.0%
!! GATGTGGCTAGTTTGTTAGA+GGG + chr1_1:9292100-9292119 None:intergenic 40.0%
!! TGATGTGGCTAGTTTGTTAG+AGG + chr1_1:9292101-9292120 None:intergenic 40.0%
CCAACTAGTGAACTAAACAG+GGG + chr1_1:9292140-9292159 None:intergenic 40.0%
CCCAACTAGTGAACTAAACA+GGG + chr1_1:9292141-9292160 None:intergenic 40.0%
! CCCTGTTTAGTTCACTAGTT+GGG - chr1_1:9292138-9292157 Msa0006410:CDS 40.0%
TTAGTTCACTAGTTGGGCTT+AGG - chr1_1:9292144-9292163 Msa0006410:CDS 40.0%
! CCCATCAGTTTCATCCTTTT+AGG - chr1_1:9278312-9278331 Msa0006410:CDS 40.0%
CCCTAAAAGGATGAAACTGA+TGG + chr1_1:9278316-9278335 None:intergenic 40.0%
TATCTGTTTGCATGCTGCAT+AGG - chr1_1:9292377-9292396 Msa0006410:intron 40.0%
AATGGCTAACTAGGCACATA+AGG + chr1_1:9292477-9292496 None:intergenic 40.0%
! AATAAAGAAAACGGTGTCGG+TGG + chr1_1:9292552-9292571 None:intergenic 40.0%
TGCTATAGATCTCAAGCCAA+GGG + chr1_1:9292580-9292599 None:intergenic 40.0%
TTGCTATAGATCTCAAGCCA+AGG + chr1_1:9292581-9292600 None:intergenic 40.0%
TTTGTTAATAAGGGATGGGG+AGG - chr1_1:9292648-9292667 Msa0006410:CDS 40.0%
TGCCATACAAACTATCTCTG+AGG - chr1_1:9292677-9292696 Msa0006410:CDS 40.0%
GCCATACAAACTATCTCTGA+GGG - chr1_1:9292678-9292697 Msa0006410:CDS 40.0%
CCATACAAACTATCTCTGAG+GGG - chr1_1:9292679-9292698 Msa0006410:CDS 40.0%
! GGGATTTAATTTCAGTCCCT+TGG - chr1_1:9292699-9292718 Msa0006410:CDS 40.0%
ATTTCAGTCCCTTGGAAAGT+TGG - chr1_1:9292707-9292726 Msa0006410:intron 40.0%
GTTGGAATTACAAGGCTAAG+CGG - chr1_1:9292725-9292744 Msa0006410:intron 40.0%
TAAGCTAGCTCGATGGATAA+AGG + chr1_1:9292839-9292858 None:intergenic 40.0%
TTCTATGTAGGATCTTGGGA+TGG + chr1_1:9292905-9292924 None:intergenic 40.0%
! AAAGTTTTTCCACCAAGGCA+TGG - chr1_1:9292930-9292949 Msa0006410:intron 40.0%
AGGCCTAACTCAATCTCAAA+AGG + chr1_1:9292982-9293001 None:intergenic 40.0%
GTCATGTCAAGGTTATGTGA+TGG + chr1_1:9293043-9293062 None:intergenic 40.0%
ATTGCTAATGTAGGGCTTGA+AGG - chr1_1:9293444-9293463 Msa0006410:intron 40.0%
GCAAATAGGGGTAAAAAACG+TGG + chr1_1:9293568-9293587 None:intergenic 40.0%
!!! GTTTTTTACCCCTATTTGCC+AGG - chr1_1:9293569-9293588 Msa0006410:intron 40.0%
AAAATGAGCCTGGCAAATAG+GGG + chr1_1:9293580-9293599 None:intergenic 40.0%
CCAAAACACTTCTCCTCAAA+AGG + chr1_1:9293900-9293919 None:intergenic 40.0%
!!! CCTTTTGAGGAGAAGTGTTT+TGG - chr1_1:9293897-9293916 Msa0006410:intron 40.0%
!!! TGAGGAGAAGTGTTTTGGAT+TGG - chr1_1:9293902-9293921 Msa0006410:intron 40.0%
TCGACCAAAAACTGGCATTA+AGG + chr1_1:9294398-9294417 None:intergenic 40.0%
TGATTTGATGCCACATTCCT+TGG - chr1_1:9294441-9294460 Msa0006410:intron 40.0%
! TGACGTTTGCAATAAGTTGG+TGG - chr1_1:9294645-9294664 Msa0006410:intron 40.0%
CATATAGACCAAGGAGAGAT+CGG + chr1_1:9294800-9294819 None:intergenic 40.0%
! TATGTTGCCATGCACTTTTC+AGG - chr1_1:9294944-9294963 Msa0006410:intron 40.0%
AACTTATGATGTCGAGGTTG+TGG - chr1_1:9295076-9295095 Msa0006410:intron 40.0%
CCCCAAATCACTGGAAAAAA+TGG + chr1_1:9295349-9295368 None:intergenic 40.0%
AGAAGATATGACTGTGGTCA+AGG - chr1_1:9295402-9295421 Msa0006410:CDS 40.0%
ATCAAAAGGTGGCAAGCAAT+AGG - chr1_1:9280728-9280747 Msa0006410:intron 40.0%
ATGAGAAGCAAACTGAAGTC+AGG + chr1_1:9295645-9295664 None:intergenic 40.0%
AATTACCATGGAGGAAGAGT+CGG + chr1_1:9296024-9296043 None:intergenic 40.0%
CAAGAAGAGAATTACCATGG+AGG + chr1_1:9296033-9296052 None:intergenic 40.0%
CCTCAAGAAGAGAATTACCA+TGG + chr1_1:9296036-9296055 None:intergenic 40.0%
CCATGGTAATTCTCTTCTTG+AGG - chr1_1:9296033-9296052 Msa0006410:intron 40.0%
!! CTCTCTGTAGATTGCCATTT+TGG - chr1_1:9296341-9296360 Msa0006410:intron 40.0%
CCGAACAAGATCAACCAAAA+TGG + chr1_1:9296358-9296377 None:intergenic 40.0%
!! TTTTGGTTGATCTTGTTCGG+AGG - chr1_1:9296358-9296377 Msa0006410:intron 40.0%
TTTGGTTGATCTTGTTCGGA+GGG - chr1_1:9296359-9296378 Msa0006410:intron 40.0%
TGACGTACTACTGGAGATTT+CGG + chr1_1:9296394-9296413 None:intergenic 40.0%
GGAGTCCAGAATGATATATC+TGG + chr1_1:9296456-9296475 None:intergenic 40.0%
!! TCAATTCTAAGACCTCCACA+GGG - chr1_1:9296498-9296517 Msa0006410:intron 40.0%
!! AAAAGCACTATGCGTTACTC+TGG - chr1_1:9296582-9296601 Msa0006410:intron 40.0%
ACAGGAAAGACAAACTACAC+TGG - chr1_1:9285043-9285062 Msa0006410:intron 40.0%
GTCGAGGAGTAGTTTAAACA+AGG - chr1_1:9297017-9297036 Msa0006410:intron 40.0%
! AAGGGTGCATAGAGTATCAA+TGG + chr1_1:9297124-9297143 None:intergenic 40.0%
AGTCACATAACCTGTCTTCT+TGG - chr1_1:9297203-9297222 Msa0006410:intron 40.0%
GTGAACTTGCAAACTCGATT+GGG + chr1_1:9297583-9297602 None:intergenic 40.0%
! CTGAAGACCATACAAGCTTT+TGG + chr1_1:9297605-9297624 None:intergenic 40.0%
GTGAAAAGCTTAGCAAACTG+TGG + chr1_1:9297640-9297659 None:intergenic 40.0%
ACAACATTTCGGGACAACAA+GGG + chr1_1:9297664-9297683 None:intergenic 40.0%
ATGTCCTTGGGACAACATTT+CGG + chr1_1:9297675-9297694 None:intergenic 40.0%
AGTTACGACTCTATGTCCTT+GGG + chr1_1:9297687-9297706 None:intergenic 40.0%
AAGTTACGACTCTATGTCCT+TGG + chr1_1:9297688-9297707 None:intergenic 40.0%
! TCTTGAGATTGGTTGGAGCA+AGG - chr1_1:9275166-9275185 Msa0006410:three_prime_UTR 45.0%
! CTTGAGATTGGTTGGAGCAA+GGG - chr1_1:9275167-9275186 Msa0006410:three_prime_UTR 45.0%
ATTGGTTGGAGCAAGGGATT+TGG - chr1_1:9275173-9275192 Msa0006410:three_prime_UTR 45.0%
! TTGGAGCAAGGGATTTGGTA+AGG - chr1_1:9275178-9275197 Msa0006410:three_prime_UTR 45.0%
GTATCATCCCTATGCTAGCA+TGG - chr1_1:9275259-9275278 Msa0006410:three_prime_UTR 45.0%
AGCTCTACCATGCTAGCATA+GGG + chr1_1:9275269-9275288 None:intergenic 45.0%
! TAGCTCTACCATGCTAGCAT+AGG + chr1_1:9275270-9275289 None:intergenic 45.0%
ATGCTAGCATGGTAGAGCTA+TGG - chr1_1:9275270-9275289 Msa0006410:three_prime_UTR 45.0%
TGCTAGCATGGTAGAGCTAT+GGG - chr1_1:9275271-9275290 Msa0006410:three_prime_UTR 45.0%
CTGCCAAAAAGAACGAGACT+AGG + chr1_1:9276591-9276610 None:intergenic 45.0%
!! GTCTCGTTCTTTTTGGCAGT+TGG - chr1_1:9276592-9276611 Msa0006410:intron 45.0%
CTTCTCCAGTGATCAAGAAG+CGG - chr1_1:9276619-9276638 Msa0006410:intron 45.0%
GAAAACCGCTTCTTGATCAC+TGG + chr1_1:9276627-9276646 None:intergenic 45.0%
GGAGACTTGGAGTGAAAAGA+AGG - chr1_1:9277218-9277237 Msa0006410:intron 45.0%
CGCATAACCTCTATTTCGCA+CGG + chr1_1:9277339-9277358 None:intergenic 45.0%
CGTGCGAAATAGAGGTTATG+CGG - chr1_1:9277337-9277356 Msa0006410:CDS 45.0%
!! AATGGACAAGCTCTGAGATG+AGG + chr1_1:9277509-9277528 None:intergenic 45.0%
! TCTGAAACAGTAAGCTTGCC+TGG + chr1_1:9277647-9277666 None:intergenic 45.0%
! TGCACTGATAAACTCCTCGA+TGG + chr1_1:9277757-9277776 None:intergenic 45.0%
GACATTAGGCGAAGCAAGTA+CGG - chr1_1:9278698-9278717 Msa0006410:intron 45.0%
GAGATCCCTCATGATAAAGG+AGG + chr1_1:9278738-9278757 None:intergenic 45.0%
CAAAATGAGCCAGGCTTGAA+AGG + chr1_1:9278951-9278970 None:intergenic 45.0%
! CTTTCAAGCCTGGCTCATTT+TGG - chr1_1:9278949-9278968 Msa0006410:intron 45.0%
! CAAGTTGACACCACATTCCT+TGG - chr1_1:9279711-9279730 Msa0006410:intron 45.0%
GATGTCTTTGACAGAGCTGT+TGG - chr1_1:9279875-9279894 Msa0006410:intron 45.0%
TATGTTGCCATGCACTGTTC+AGG - chr1_1:9280215-9280234 Msa0006410:intron 45.0%
! GCTGTGGTTAGTACCGTTTT+TGG - chr1_1:9280363-9280382 Msa0006410:intron 45.0%
!! GTGGTTAGTACCGTTTTTGG+AGG - chr1_1:9280366-9280385 Msa0006410:intron 45.0%
!! CCATTTTTCCAGTGGTTTGG+GGG - chr1_1:9280630-9280649 Msa0006410:intron 45.0%
! TTGCTTGCCACCTTTTGATC+TGG + chr1_1:9280727-9280746 None:intergenic 45.0%
! TTTCCTTTTCTAGGCTGACG+TGG - chr1_1:9280768-9280787 Msa0006410:intron 45.0%
! TTCCTTTTCTAGGCTGACGT+GGG - chr1_1:9280769-9280788 Msa0006410:intron 45.0%
ATCACAGATGGAGATATCCG+TGG - chr1_1:9280827-9280846 Msa0006410:intron 45.0%
ATGGAGATATCCGTGGAAAC+TGG - chr1_1:9280834-9280853 Msa0006410:intron 45.0%
TGGAGATATCCGTGGAAACT+GGG - chr1_1:9280835-9280854 Msa0006410:intron 45.0%
GTTCATCATCCCAGTTTCCA+CGG + chr1_1:9280847-9280866 None:intergenic 45.0%
TTCACGATGCCAATCCTTTG+AGG + chr1_1:9281253-9281272 None:intergenic 45.0%
TCCACCAACTCAGAGACATT+GGG + chr1_1:9281759-9281778 None:intergenic 45.0%
GTACTAAAACCTCCACAAGG+GGG - chr1_1:9281783-9281802 Msa0006410:intron 45.0%
CTGCAGGTACGTAAGATCAA+CGG - chr1_1:9282043-9282062 Msa0006410:CDS 45.0%
AGGAAACCCTAAACAGAGCT+CGG + chr1_1:9282198-9282217 None:intergenic 45.0%
ACAGAAAACCAGGAGATGCT+GGG + chr1_1:9282285-9282304 None:intergenic 45.0%
AACAGAAAACCAGGAGATGC+TGG + chr1_1:9282286-9282305 None:intergenic 45.0%
GGATGTTTGGAAAAGGGTTG+AGG - chr1_1:9282358-9282377 Msa0006410:intron 45.0%
TGACAAGGGAGGAGAAACTA+TGG + chr1_1:9282418-9282437 None:intergenic 45.0%
ATGGTGACATCGAAAGAAGG+GGG + chr1_1:9282462-9282481 None:intergenic 45.0%
GATGGTGACATCGAAAGAAG+GGG + chr1_1:9282463-9282482 None:intergenic 45.0%
GGATGGTGACATCGAAAGAA+GGG + chr1_1:9282464-9282483 None:intergenic 45.0%
GACACAACACCAGTAGAACA+TGG + chr1_1:9282619-9282638 None:intergenic 45.0%
CAGGTTACCCAAAAGGGAAA+CGG + chr1_1:9282730-9282749 None:intergenic 45.0%
GAAGCACAGGTTACCCAAAA+GGG + chr1_1:9282736-9282755 None:intergenic 45.0%
CAAGGAGGAATTGCACAAGT+TGG + chr1_1:9282868-9282887 None:intergenic 45.0%
GGAAGAGAAATGGATCAAGG+AGG + chr1_1:9282883-9282902 None:intergenic 45.0%
ACACACGCTTGGAAGAGAAA+TGG + chr1_1:9282893-9282912 None:intergenic 45.0%
! GGTTGTTAGTCTGCAGATGT+TGG - chr1_1:9283057-9283076 Msa0006410:intron 45.0%
TTGGATGAGCAAAACCGGTT+TGG - chr1_1:9283076-9283095 Msa0006410:intron 45.0%
GCATTTATCCCCCTGCTATA+TGG - chr1_1:9283391-9283410 Msa0006410:intron 45.0%
TTTATCCCCCTGCTATATGG+GGG - chr1_1:9283394-9283413 Msa0006410:intron 45.0%
AAAAGTCCCCCATATAGCAG+GGG + chr1_1:9283403-9283422 None:intergenic 45.0%
CAAAAGTCCCCCATATAGCA+GGG + chr1_1:9283404-9283423 None:intergenic 45.0%
AGTTGCGCTTGAGAAAGAAG+AGG + chr1_1:9284178-9284197 None:intergenic 45.0%
AGAAGGGAAGGAGGAAAAGA+AGG - chr1_1:9284684-9284703 Msa0006410:intron 45.0%
ACCAAAAGTCCCCATATGAC+AGG - chr1_1:9284961-9284980 Msa0006410:intron 45.0%
CCAAAAGTCCCCATATGACA+GGG - chr1_1:9284962-9284981 Msa0006410:intron 45.0%
CAAAAGTCCCCATATGACAG+GGG - chr1_1:9284963-9284982 Msa0006410:intron 45.0%
AAAAGTCCCCATATGACAGG+GGG - chr1_1:9284964-9284983 Msa0006410:intron 45.0%
! TTTTACCCCCCTGTCATATG+GGG + chr1_1:9284973-9284992 None:intergenic 45.0%
! CTTTTACCCCCCTGTCATAT+GGG + chr1_1:9284974-9284993 None:intergenic 45.0%
CTACACTGGAGTCTTTGTCA+AGG - chr1_1:9285057-9285076 Msa0006410:intron 45.0%
! GTCAAGGAGCAATTTGCTCA+AGG - chr1_1:9285073-9285092 Msa0006410:intron 45.0%
!! CACTTGAAATGGTGCTGTCT+CGG - chr1_1:9285180-9285199 Msa0006410:intron 45.0%
! ACTTGGTAATCGTACGTGCT+CGG + chr1_1:9285513-9285532 None:intergenic 45.0%
!! ACTAGGACCGGATCGATTTT+CGG - chr1_1:9285773-9285792 Msa0006410:intron 45.0%
AGGTGATCCGAAAATCGATC+CGG + chr1_1:9285783-9285802 None:intergenic 45.0%
CAAAGGGGGCAAAACATAAG+GGG + chr1_1:9286458-9286477 None:intergenic 45.0%
GCAAAGGGGGCAAAACATAA+GGG + chr1_1:9286459-9286478 None:intergenic 45.0%
TGCAAAGGGGGCAAAACATA+AGG + chr1_1:9286460-9286479 None:intergenic 45.0%
! TTTTGCCCCCTTTGCACTTT+TGG - chr1_1:9286464-9286483 Msa0006410:intron 45.0%
! TAGAGGGCCAAAAGTGCAAA+GGG + chr1_1:9286474-9286493 None:intergenic 45.0%
! TAGGGGGTCAAAAGTGCAAA+GGG - chr1_1:9286665-9286684 Msa0006410:intron 45.0%
GTGCAAAGGGAGCAAAACAT+AGG - chr1_1:9286678-9286697 Msa0006410:intron 45.0%
GCAAAGGGAGCAAAACATAG+GGG - chr1_1:9286680-9286699 Msa0006410:intron 45.0%
CAAAGGGAGCAAAACATAGG+GGG - chr1_1:9286681-9286700 Msa0006410:intron 45.0%
GTTAAGCAGCAAGGAATGAG+TGG - chr1_1:9287065-9287084 Msa0006410:intron 45.0%
AACATGGGTAAACCGTCTCA+AGG - chr1_1:9287158-9287177 Msa0006410:intron 45.0%
TTGCATCAGAGACAAAAGCG+AGG - chr1_1:9287244-9287263 Msa0006410:intron 45.0%
TTGTGCTAGCTCATACCGAA+TGG - chr1_1:9287270-9287289 Msa0006410:intron 45.0%
CCCATCGTTGATGTTGATAC+TGG - chr1_1:9287299-9287318 Msa0006410:intron 45.0%
CCCAGTATCAACATCAACGA+TGG + chr1_1:9287303-9287322 None:intergenic 45.0%
!! ATACTGGGAAGCACTTGCTA+TGG - chr1_1:9287315-9287334 Msa0006410:intron 45.0%
!! GGAAGCACTTGCTATGGAAT+GGG - chr1_1:9287321-9287340 Msa0006410:intron 45.0%
AGTAAGCGTGTACACCTGAT+AGG - chr1_1:9287440-9287459 Msa0006410:intron 45.0%
TCGTAAGATCTGTGCCTATC+AGG + chr1_1:9287457-9287476 None:intergenic 45.0%
AAGGTGAATAAGTGGGGTGT+GGG - chr1_1:9287996-9288015 Msa0006410:intron 45.0%
!!! GGCTCCAGCCTTTGTTTTTT+AGG + chr1_1:9289812-9289831 None:intergenic 45.0%
ATGAATGCATCGCGGTTTGT+GGG + chr1_1:9289835-9289854 None:intergenic 45.0%
AATGAATGCATCGCGGTTTG+TGG + chr1_1:9289836-9289855 None:intergenic 45.0%
TGAGCTTCAGAACCCAGAAA+CGG + chr1_1:9289915-9289934 None:intergenic 45.0%
! TCCGGCTAAAAGTGAGTTGA+AGG + chr1_1:9290440-9290459 None:intergenic 45.0%
! GCTTGGTAGTTGGAAGAAGT+TGG - chr1_1:9290769-9290788 Msa0006410:intron 45.0%
CAGAAACTAGTTAACTCGCC+TGG + chr1_1:9290954-9290973 None:intergenic 45.0%
AACAGCCTTTGGCACTTCAA+AGG + chr1_1:9291600-9291619 None:intergenic 45.0%
CAGTGCTCTGTGTGTAGTTA+GGG + chr1_1:9291973-9291992 None:intergenic 45.0%
CTTTCTCTGCCCAAACCTTT+AGG - chr1_1:9292010-9292029 Msa0006410:intron 45.0%
GATAGGGATAGCAATAGAGG+AGG + chr1_1:9292058-9292077 None:intergenic 45.0%
! GTGGGTTACATTTGCTGATG+TGG + chr1_1:9292116-9292135 None:intergenic 45.0%
AGTGAACTAAACAGGGGAGT+GGG + chr1_1:9292134-9292153 None:intergenic 45.0%
TAGTGAACTAAACAGGGGAG+TGG + chr1_1:9292135-9292154 None:intergenic 45.0%
! CCCCTGTTTAGTTCACTAGT+TGG - chr1_1:9292137-9292156 Msa0006410:CDS 45.0%
GCCCAACTAGTGAACTAAAC+AGG + chr1_1:9292142-9292161 None:intergenic 45.0%
CGGATTTAACTATGTGCTGC+TGG - chr1_1:9292336-9292355 Msa0006410:CDS 45.0%
AAAAACAAACAGGAGGGAGC+AGG - chr1_1:9292616-9292635 Msa0006410:CDS 45.0%
AAAACAAACAGGAGGGAGCA+GGG - chr1_1:9292617-9292636 Msa0006410:CDS 45.0%
! CCCCTCAGAGATAGTTTGTA+TGG + chr1_1:9292682-9292701 None:intergenic 45.0%
TGGGATCACAATAGACACCA+GGG + chr1_1:9292768-9292787 None:intergenic 45.0%
TTAGGATAACCATGCCTTGG+TGG + chr1_1:9292942-9292961 None:intergenic 45.0%
AGGTTAGGATAACCATGCCT+TGG + chr1_1:9292945-9292964 None:intergenic 45.0%
! GGTGAATAGGTGTCATGTCA+AGG + chr1_1:9293054-9293073 None:intergenic 45.0%
AACAATGTAACTCGCAGCGT+TGG + chr1_1:9293304-9293323 None:intergenic 45.0%
TTTGAGAGCCCTGATAAAGG+AGG + chr1_1:9293327-9293346 None:intergenic 45.0%
TCCTTTATCAGGGCTCTCAA+AGG - chr1_1:9293326-9293345 Msa0006410:intron 45.0%
CCTTTATCAGGGCTCTCAAA+GGG - chr1_1:9293327-9293346 Msa0006410:intron 45.0%
! TTGTTTGGGGTTGTCTCCAA+TGG - chr1_1:9294309-9294328 Msa0006410:intron 45.0%
ACAGATGCTCGACCAAAAAC+TGG + chr1_1:9294406-9294425 None:intergenic 45.0%
! AACAGGATGATGATGCTGCA+AGG - chr1_1:9294766-9294785 Msa0006410:intron 45.0%
! ACAGGATGATGATGCTGCAA+GGG - chr1_1:9294767-9294786 Msa0006410:intron 45.0%
ACTGCAGGACATATAGACCA+AGG + chr1_1:9294809-9294828 None:intergenic 45.0%
TCTATATGTCCTGCAGTGCT+TGG - chr1_1:9294812-9294831 Msa0006410:CDS 45.0%
AAGTGGATGGTAACTTGGGA+AGG + chr1_1:9294877-9294896 None:intergenic 45.0%
! ACAAGAGCCTGAAAAGTGCA+TGG + chr1_1:9294954-9294973 None:intergenic 45.0%
! TTGCTTGCCACCTTTTGATC+TGG + chr1_1:9280727-9280746 None:intergenic 45.0%
TTTCCTTTGTAAGTCTGCCG+TGG - chr1_1:9295485-9295504 Msa0006410:intron 45.0%
TTCCTTTGTAAGTCTGCCGT+GGG - chr1_1:9295486-9295505 Msa0006410:intron 45.0%
GCATGTTTCCTTAACTCCCA+CGG + chr1_1:9295505-9295524 None:intergenic 45.0%
GTTCATCATCGCAGTTTCCA+CGG + chr1_1:9295564-9295583 None:intergenic 45.0%
TGGCATATATGACGACCACT+GGG + chr1_1:9295590-9295609 None:intergenic 45.0%
TTGGCATATATGACGACCAC+TGG + chr1_1:9295591-9295610 None:intergenic 45.0%
!! AAATACCGACTCTTCCTCCA+TGG - chr1_1:9296016-9296035 Msa0006410:intron 45.0%
! GAATTGACTCCACCAACTCA+AGG + chr1_1:9296485-9296504 None:intergenic 45.0%
!! GTCAATTCTAAGACCTCCAC+AGG - chr1_1:9296497-9296516 Msa0006410:intron 45.0%
GCATTCTGTTTACAACCTGC+AGG - chr1_1:9296651-9296670 Msa0006410:intron 45.0%
!! CACCAACTCGAGTGGATTAA+GGG + chr1_1:9297142-9297161 None:intergenic 45.0%
!! ACACCAACTCGAGTGGATTA+AGG + chr1_1:9297143-9297162 None:intergenic 45.0%
!! CACTCGAGTTGGTGTTGTAT+CGG - chr1_1:9297148-9297167 Msa0006410:intron 45.0%
GATACTTTGGCCAAGAAGAC+AGG + chr1_1:9297216-9297235 None:intergenic 45.0%
! CCACACTCAATAGCCTTTTC+AGG + chr1_1:9297480-9297499 None:intergenic 45.0%
CCTGAAAAGGCTATTGAGTG+TGG - chr1_1:9297477-9297496 Msa0006410:intron 45.0%
CTTGCAAACTCGATTGGGAT+AGG + chr1_1:9297578-9297597 None:intergenic 45.0%
GGTGAACTTGCAAACTCGAT+TGG + chr1_1:9297584-9297603 None:intergenic 45.0%
CTTAGCAAACTGTGGCATGT+TGG + chr1_1:9297632-9297651 None:intergenic 45.0%
GACAACATTTCGGGACAACA+AGG + chr1_1:9297665-9297684 None:intergenic 45.0%
TGTCCTTGGGACAACATTTC+GGG + chr1_1:9297674-9297693 None:intergenic 45.0%
! TATCCAACTTGCAGGGGTAT+TGG - chr1_1:9297759-9297778 Msa0006410:CDS 45.0%
!! ATCCAACTTGCAGGGGTATT+GGG - chr1_1:9297760-9297779 Msa0006410:CDS 45.0%
!!! TTAGTTTTTTTTTTTTTTTT+GGG - chr1_1:9275826-9275845 Msa0006410:CDS 5.0%
!! TAAAAATTGATATATTTAAA+GGG + chr1_1:9275899-9275918 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+CGG + chr1_1:9283254-9283273 None:intergenic 5.0%
!! TTAAAAAATAAAAAAAATTC+TGG - chr1_1:9283683-9283702 Msa0006410:intron 5.0%
!!! ATTTTTATAAAAAAAAATTC+TGG + chr1_1:9283783-9283802 None:intergenic 5.0%
!! TAATATATGAAAATAAAATA+TGG + chr1_1:9283969-9283988 None:intergenic 5.0%
!!! TTTTATTTTCATATATTAAT+TGG - chr1_1:9283971-9283990 Msa0006410:intron 5.0%
!! GTAAATAAAAAATAAAAAAA+AGG - chr1_1:9284767-9284786 Msa0006410:intron 5.0%
!! AAAAAAAAATATAAAATAGA+AGG + chr1_1:9288550-9288569 None:intergenic 5.0%
!! AAATATTATAAAAGAAAATT+AGG + chr1_1:9289214-9289233 None:intergenic 5.0%
!! AAATATTATAAAAGAAAATT+AGG + chr1_1:9289214-9289233 None:intergenic 5.0%
!! TATAAATATTCATATTAATA+TGG - chr1_1:9293640-9293659 Msa0006410:intron 5.0%
!!! TTTTTGTTATTATTATTATT+TGG + chr1_1:9294200-9294219 None:intergenic 5.0%
!!! TATTTTATTTTTTAAGTTAA+TGG - chr1_1:9296843-9296862 Msa0006410:intron 5.0%
!!! ATTTTATTTTTTAAGTTAAT+GGG - chr1_1:9296844-9296863 Msa0006410:intron 5.0%
! GAAGGGCGTACCACATTTAG+AGG - chr1_1:9277133-9277152 Msa0006410:intron 50.0%
TTGTTCTCCGTCTCTTGACC+AGG - chr1_1:9277626-9277645 Msa0006410:intron 50.0%
AAGCTTGCCTGGTCAAGAGA+CGG + chr1_1:9277636-9277655 None:intergenic 50.0%
TCTTTCCGTCGAACTGCCAA+AGG - chr1_1:9278049-9278068 Msa0006410:intron 50.0%
AACAGCCTTTGGCAGTTCGA+CGG + chr1_1:9278057-9278076 None:intergenic 50.0%
! AGATTGGTCCTTGCCCTTCA+TGG - chr1_1:9278279-9278298 Msa0006410:intron 50.0%
TATGGACACCCTTTCAAGCC+TGG - chr1_1:9278939-9278958 Msa0006410:intron 50.0%
CAGTCCTTATCTCTACCCAG+AGG - chr1_1:9279765-9279784 Msa0006410:intron 50.0%
GAGAAACTCCGAGCTCTTCT+TGG - chr1_1:9280056-9280075 Msa0006410:intron 50.0%
! GAGCAACAACCAAGCATTGC+AGG + chr1_1:9280091-9280110 None:intergenic 50.0%
AGAAGAGCCTGAACAGTGCA+TGG + chr1_1:9280225-9280244 None:intergenic 50.0%
CCCCCAAACCACTGGAAAAA+TGG + chr1_1:9280633-9280652 None:intergenic 50.0%
GGGATGATGAACATTCCCAG+TGG - chr1_1:9280855-9280874 Msa0006410:intron 50.0%
TTGCTGCGTACATTTCCCTC+CGG + chr1_1:9281659-9281678 None:intergenic 50.0%
GGTTCCCAATGTCTCTGAGT+TGG - chr1_1:9281752-9281771 Msa0006410:intron 50.0%
! TCCCAATGTCTCTGAGTTGG+TGG - chr1_1:9281755-9281774 Msa0006410:intron 50.0%
CTCCACCAACTCAGAGACAT+TGG + chr1_1:9281760-9281779 None:intergenic 50.0%
TGAGAACTGACAACACCTGC+AGG + chr1_1:9281993-9282012 None:intergenic 50.0%
CAGGTACGTAAGATCAACGG+TGG - chr1_1:9282046-9282065 Msa0006410:CDS 50.0%
GGAAACCCTAAACAGAGCTC+GGG + chr1_1:9282197-9282216 None:intergenic 50.0%
AGAAAACCAGGAGATGCTGG+GGG + chr1_1:9282283-9282302 None:intergenic 50.0%
CAGAAAACCAGGAGATGCTG+GGG + chr1_1:9282284-9282303 None:intergenic 50.0%
GGGATGGTGACATCGAAAGA+AGG + chr1_1:9282465-9282484 None:intergenic 50.0%
! ACACATCTGTTGGTGGAGGA+GGG + chr1_1:9282485-9282504 None:intergenic 50.0%
! AACACATCTGTTGGTGGAGG+AGG + chr1_1:9282486-9282505 None:intergenic 50.0%
! GCTAACACATCTGTTGGTGG+AGG + chr1_1:9282489-9282508 None:intergenic 50.0%
GTCGCTAACACATCTGTTGG+TGG + chr1_1:9282492-9282511 None:intergenic 50.0%
CTCGTCGCTAACACATCTGT+TGG + chr1_1:9282495-9282514 None:intergenic 50.0%
!! TGAGTCCATGGAGGTTTTGG+TGG + chr1_1:9282522-9282541 None:intergenic 50.0%
CCAAAACCTCCATGGACTCA+CGG - chr1_1:9282522-9282541 Msa0006410:intron 50.0%
TCAGATATGCCGTGAGTCCA+TGG + chr1_1:9282534-9282553 None:intergenic 50.0%
!! TGCCTTTGCCGTTTCCCTTT+TGG - chr1_1:9282719-9282738 Msa0006410:intron 50.0%
!! GCCTTTGCCGTTTCCCTTTT+GGG - chr1_1:9282720-9282739 Msa0006410:intron 50.0%
ACCCAAAAGGGAAACGGCAA+AGG + chr1_1:9282724-9282743 None:intergenic 50.0%
! GGAAGCACAGGTTACCCAAA+AGG + chr1_1:9282737-9282756 None:intergenic 50.0%
GTCGAGATTGAACACACGCT+TGG + chr1_1:9282904-9282923 None:intergenic 50.0%
CTTGCAAAGTCTTCCGCACA+CGG + chr1_1:9283034-9283053 None:intergenic 50.0%
TGCGGAAGACTTTGCAAGCA+AGG - chr1_1:9283036-9283055 Msa0006410:CDS 50.0%
CAAGGATCTAGCAGCCAAAC+CGG + chr1_1:9283093-9283112 None:intergenic 50.0%
! AACAGAGTGAGCAGAGTGCT+TGG + chr1_1:9283186-9283205 None:intergenic 50.0%
TCACTCTGTTGTAGCCCTTG+TGG - chr1_1:9283196-9283215 Msa0006410:intron 50.0%
GTTGTAGCCCTTGTGGCATT+TGG - chr1_1:9283203-9283222 Msa0006410:intron 50.0%
AAAGTCCCCCATATAGCAGG+GGG + chr1_1:9283402-9283421 None:intergenic 50.0%
CCAAAAGTCCCCCATATAGC+AGG + chr1_1:9283405-9283424 None:intergenic 50.0%
! CCTGCTATATGGGGGACTTT+TGG - chr1_1:9283402-9283421 Msa0006410:intron 50.0%
TTACCCCCTCAGTGCATATG+TGG - chr1_1:9283486-9283505 Msa0006410:intron 50.0%
GGAAAGGGAAGAAGAAGAGG+TGG + chr1_1:9284342-9284361 None:intergenic 50.0%
AGGATGAAGAGAAGGGAAGG+AGG - chr1_1:9284675-9284694 Msa0006410:intron 50.0%
GGAGGAAAAGAAGGATACGG+TGG - chr1_1:9284693-9284712 Msa0006410:intron 50.0%
AGAAGGATACGGTGGAGAGA+AGG - chr1_1:9284701-9284720 Msa0006410:intron 50.0%
GAAGGATACGGTGGAGAGAA+GGG - chr1_1:9284702-9284721 Msa0006410:intron 50.0%
TTACCCCCTCAGTGCATATG+TGG + chr1_1:9283486-9283505 None:intergenic 50.0%
! CCCTGTCATATGGGGACTTT+TGG + chr1_1:9284965-9284984 None:intergenic 50.0%
AAAGTCCCCATATGACAGGG+GGG - chr1_1:9284965-9284984 Msa0006410:intron 50.0%
! GCTTTTACCCCCCTGTCATA+TGG + chr1_1:9284975-9284994 None:intergenic 50.0%
CGAGACAGCACCATTTCAAG+TGG + chr1_1:9285182-9285201 None:intergenic 50.0%
TAATCGTACGTGCTCGGTAC+AGG + chr1_1:9285507-9285526 None:intergenic 50.0%
GCGAGTACCATACGTGTACT+TGG + chr1_1:9285530-9285549 None:intergenic 50.0%
GAAAATCGATCCGGTCCTAG+TGG + chr1_1:9285774-9285793 None:intergenic 50.0%
! AGAGGGCCAAAAGTGCAAAG+GGG + chr1_1:9286473-9286492 None:intergenic 50.0%
! CTAGAGGGCCAAAAGTGCAA+AGG + chr1_1:9286475-9286494 None:intergenic 50.0%
! CTTTGCACTTTTGGCCCTCT+AGG - chr1_1:9286473-9286492 Msa0006410:intron 50.0%
TGACCAAGTCAATGCTGACG+TGG + chr1_1:9286636-9286655 None:intergenic 50.0%
! CTAGGGGGTCAAAAGTGCAA+AGG - chr1_1:9286664-9286683 Msa0006410:intron 50.0%
GTGAAGACTGCGACTCCTAT+AGG - chr1_1:9287114-9287133 Msa0006410:intron 50.0%
TGGGTAAACCGTCTCAAGGT+AGG - chr1_1:9287162-9287181 Msa0006410:intron 50.0%
!! GGGAAGCACTTGCTATGGAA+TGG - chr1_1:9287320-9287339 Msa0006410:intron 50.0%
CAAGGTGAATAAGTGGGGTG+TGG - chr1_1:9287995-9288014 Msa0006410:intron 50.0%
AATAAACCCGAGCGGAGCAA+GGG - chr1_1:9289382-9289401 Msa0006410:intron 50.0%
! TTTTTGACCCTTGCTCCGCT+CGG + chr1_1:9289392-9289411 None:intergenic 50.0%
CGGAGCAAGGGTCAAAAATC+TGG - chr1_1:9289394-9289413 Msa0006410:intron 50.0%
! ATTTTTGACCGTGCTCCGCT+CGG + chr1_1:9289599-9289618 None:intergenic 50.0%
!!! TATTGGTTTTGGGTGCTCGC+TGG + chr1_1:9289676-9289695 None:intergenic 50.0%
TGAGCAGATGTTCCTCTTGC+TGG + chr1_1:9289736-9289755 None:intergenic 50.0%
CAATCCGCAAAAACAGCTGC+AGG - chr1_1:9289757-9289776 Msa0006410:intron 50.0%
!!! GGTTCCTGCAGCTGTTTTTG+CGG + chr1_1:9289764-9289783 None:intergenic 50.0%
GCAGGAACCGAAAACAGAAC+AGG - chr1_1:9289775-9289794 Msa0006410:intron 50.0%
! TCCTGGGCCTGTTCTGTTTT+CGG + chr1_1:9289785-9289804 None:intergenic 50.0%
TGAATGCATCGCGGTTTGTG+GGG + chr1_1:9289834-9289853 None:intergenic 50.0%
GGATGCTGCTCTTTCTGATC+CGG - chr1_1:9290852-9290871 Msa0006410:intron 50.0%
TTGTTCTCCGTCTCTTGACC+AGG - chr1_1:9277626-9277645 Msa0006410:intron 50.0%
TAACTCGCCTGGTCAAGAGA+CGG + chr1_1:9290943-9290962 None:intergenic 50.0%
GCGTGGTTTCTCAACTGCAA+TGG + chr1_1:9291106-9291125 None:intergenic 50.0%
AAGTACAGCGTGTAACTGCG+TGG + chr1_1:9291123-9291142 None:intergenic 50.0%
TAAATCGGATGGTCGAGGTG+AGG - chr1_1:9291216-9291235 Msa0006410:CDS 50.0%
GCAGTGCTCTGTGTGTAGTT+AGG + chr1_1:9291974-9291993 None:intergenic 50.0%
AGCACTGCTCCTTCAGAGAA+AGG - chr1_1:9291986-9292005 Msa0006410:intron 50.0%
AAACAAACAGGAGGGAGCAG+GGG - chr1_1:9292618-9292637 Msa0006410:CDS 50.0%
GTGGGATCACAATAGACACC+AGG + chr1_1:9292769-9292788 None:intergenic 50.0%
! CCCTTTGAGAGCCCTGATAA+AGG + chr1_1:9293330-9293349 None:intergenic 50.0%
CAGTCCTTATATCCATCCGG+AGG - chr1_1:9294494-9294513 Msa0006410:intron 50.0%
GAGAAGTTCCGATCTCTCCT+TGG - chr1_1:9294789-9294808 Msa0006410:CDS 50.0%
! GAGCAATTACCAAGCACTGC+AGG + chr1_1:9294824-9294843 None:intergenic 50.0%
! GTTGTGGCTAGCACCGTTTT+TGG - chr1_1:9295092-9295111 Msa0006410:intron 50.0%
AAGCATGGTTGCGCTCTTTC+AGG - chr1_1:9295247-9295266 Msa0006410:intron 50.0%
! CGCTCTTTCAGGTCTGTGAT+AGG - chr1_1:9295258-9295277 Msa0006410:intron 50.0%
TAAGTCTGCCGTGGGAGTTA+AGG - chr1_1:9295494-9295513 Msa0006410:intron 50.0%
ATCACAGATGGCGATATCCG+TGG - chr1_1:9295544-9295563 Msa0006410:intron 50.0%
!! ATTCTAAGACCTCCACAGGG+AGG - chr1_1:9296501-9296520 Msa0006410:intron 50.0%
AATACCGCATCACTCTGCTC+TGG + chr1_1:9296540-9296559 None:intergenic 50.0%
! ACTACACTGGAGTCTTGTCG+AGG - chr1_1:9297001-9297020 Msa0006410:intron 50.0%
CCTGTCACTAGTGTACGCAA+AGG + chr1_1:9297063-9297082 None:intergenic 50.0%
CCTTTGCGTACACTAGTGAC+AGG - chr1_1:9297060-9297079 Msa0006410:intron 50.0%
CACCCTTAATCCACTCGAGT+TGG - chr1_1:9297137-9297156 Msa0006410:intron 50.0%
CGATACAACACCAACTCGAG+TGG + chr1_1:9297150-9297169 None:intergenic 50.0%
TGTCCCGAAATGTTGTCCCA+AGG - chr1_1:9297668-9297687 Msa0006410:intron 50.0%
!! TCCAACTTGCAGGGGTATTG+GGG - chr1_1:9297761-9297780 Msa0006410:CDS 50.0%
GACGCCTCTGGGTAGAGATA+AGG + chr1_1:9279772-9279791 None:intergenic 55.0%
GTGCTCAAACTGACGCCTCT+GGG + chr1_1:9279783-9279802 None:intergenic 55.0%
AATACCGCATCACGCTGCTC+AGG + chr1_1:9281822-9281841 None:intergenic 55.0%
TAAACAGAGCTCGGGAGGAG+AGG + chr1_1:9282189-9282208 None:intergenic 55.0%
TCTCCTCCCGAGCTCTGTTT+AGG - chr1_1:9282188-9282207 Msa0006410:intron 55.0%
CTCCTCCCGAGCTCTGTTTA+GGG - chr1_1:9282189-9282208 Msa0006410:intron 55.0%
AACCCTAAACAGAGCTCGGG+AGG + chr1_1:9282194-9282213 None:intergenic 55.0%
! TGGTAGTGAAGGGGGTGTGA+AGG + chr1_1:9282398-9282417 None:intergenic 55.0%
!! AAAGAAGGGGGTGGTGGATC+TGG + chr1_1:9282450-9282469 None:intergenic 55.0%
ACATCGAAAGAAGGGGGTGG+TGG + chr1_1:9282456-9282475 None:intergenic 55.0%
GTGACATCGAAAGAAGGGGG+TGG + chr1_1:9282459-9282478 None:intergenic 55.0%
! ATCTGTTGGTGGAGGAGGGA+TGG + chr1_1:9282481-9282500 None:intergenic 55.0%
GAGCTCCACCAAAACCTCCA+TGG - chr1_1:9282514-9282533 Msa0006410:intron 55.0%
! CCGTGAGTCCATGGAGGTTT+TGG + chr1_1:9282525-9282544 None:intergenic 55.0%
GATATGCCGTGAGTCCATGG+AGG + chr1_1:9282531-9282550 None:intergenic 55.0%
ACGGCATATCTGAGCCCTCA+AGG - chr1_1:9282541-9282560 Msa0006410:intron 55.0%
CGGCATATCTGAGCCCTCAA+GGG - chr1_1:9282542-9282561 Msa0006410:intron 55.0%
TCGTTGTCATGGACCGTGTG+CGG - chr1_1:9283018-9283037 Msa0006410:CDS 55.0%
ACGCCACATATGCACTGAGG+GGG + chr1_1:9284878-9284897 None:intergenic 55.0%
CACGCCACATATGCACTGAG+GGG + chr1_1:9284877-9284896 None:intergenic 55.0%
GCACGCCACATATGCACTGA+GGG + chr1_1:9284876-9284895 None:intergenic 55.0%
AGCACGCCACATATGCACTG+AGG + chr1_1:9284875-9284894 None:intergenic 55.0%
AGCACGCCACATATGCACTG+AGG - chr1_1:9284875-9284894 Msa0006410:intron 55.0%
GCACGCCACATATGCACTGA+GGG - chr1_1:9284876-9284895 Msa0006410:intron 55.0%
CACGCCACATATGCACTGAG+GGG - chr1_1:9284877-9284896 Msa0006410:intron 55.0%
ACGCCACATATGCACTGAGG+GGG - chr1_1:9284878-9284897 Msa0006410:intron 55.0%
! AGGGCGTTTACGGTCCGATT+TGG + chr1_1:9286239-9286258 None:intergenic 55.0%
! GAGGGCCAAAAGTGCAAAGG+GGG + chr1_1:9286472-9286491 None:intergenic 55.0%
GAGTCGCAGTCTTCACCTCT+TGG + chr1_1:9287110-9287129 None:intergenic 55.0%
AACGATGGGGGAGAGCCATT+CGG + chr1_1:9287288-9287307 None:intergenic 55.0%
CTTAGCTAAGACGGCTCCGT+CGG - chr1_1:9287521-9287540 Msa0006410:intron 55.0%
CAATAAACCCGAGCGGAGCA+AGG - chr1_1:9289381-9289400 Msa0006410:intron 55.0%
! TTTTGACCCTTGCTCCGCTC+GGG + chr1_1:9289391-9289410 None:intergenic 55.0%
CAATAAACCCGAGCGGAGCA+CGG - chr1_1:9289381-9289400 Msa0006410:intron 55.0%
! TTTTTGACCGTGCTCCGCTC+GGG + chr1_1:9289598-9289617 None:intergenic 55.0%
ACCGAAAACAGAACAGGCCC+AGG - chr1_1:9289781-9289800 Msa0006410:intron 55.0%
GAATGCATCGCGGTTTGTGG+GGG + chr1_1:9289833-9289852 None:intergenic 55.0%
GACGCCTCCGGATGGATATA+AGG + chr1_1:9294501-9294520 None:intergenic 55.0%
CTTGCTGAAACTGACGCCTC+CGG + chr1_1:9294513-9294532 None:intergenic 55.0%
!! GTGGCTAGCACCGTTTTTGG+AGG - chr1_1:9295095-9295114 Msa0006410:intron 55.0%
GAGACATGCCCCCAAATCAC+TGG + chr1_1:9295358-9295377 None:intergenic 55.0%
! GATTTGGGGGCATGTCTCAG+AGG - chr1_1:9295360-9295379 Msa0006410:intron 55.0%
CTCCCACGGCAGACTTACAA+AGG + chr1_1:9295491-9295510 None:intergenic 55.0%
GCGATGATGAACAGTCCCAG+TGG - chr1_1:9295572-9295591 Msa0006410:intron 55.0%
TCCACCAACTCAAGGACGCT+GGG + chr1_1:9296477-9296496 None:intergenic 55.0%
TCACTCTGCTCTGGTAGGGA+AGG + chr1_1:9296531-9296550 None:intergenic 55.0%
CGCATCACTCTGCTCTGGTA+GGG + chr1_1:9296535-9296554 None:intergenic 55.0%
CCTACCAGAGCAGAGTGATG+CGG - chr1_1:9296533-9296552 Msa0006410:intron 55.0%
TCCCCAATACCCCTGCAAGT+TGG + chr1_1:9297765-9297784 None:intergenic 55.0%
CGTGCTCAAACTGACGCCTC+TGG + chr1_1:9279784-9279803 None:intergenic 60.0%
!! AAGCATGGTGCCGCTCTTGC+AGG - chr1_1:9280539-9280558 Msa0006410:intron 60.0%
GAGACATGCCCCCAAACCAC+TGG + chr1_1:9280641-9280660 None:intergenic 60.0%
! GGTTTGGGGGCATGTCTCAG+AGG - chr1_1:9280643-9280662 Msa0006410:intron 60.0%
CGCCCACGTCAGCCTAGAAA+AGG + chr1_1:9280774-9280793 None:intergenic 60.0%
TCACGCTGCTCAGGTAGGGA+AGG + chr1_1:9281813-9281832 None:intergenic 60.0%
CGCATCACGCTGCTCAGGTA+GGG + chr1_1:9281817-9281836 None:intergenic 60.0%
CCTACCTGAGCAGCGTGATG+CGG - chr1_1:9281815-9281834 Msa0006410:intron 60.0%
AACCAGGAGATGCTGGGGGA+AGG + chr1_1:9282279-9282298 None:intergenic 60.0%
!! TCTGGTGGTGGGCGTGACAA+GGG + chr1_1:9282432-9282451 None:intergenic 60.0%
!! ATCTGGTGGTGGGCGTGACA+AGG + chr1_1:9282433-9282452 None:intergenic 60.0%
CCTGTCACTCGGGTCTGCAA+AGG + chr1_1:9285119-9285138 None:intergenic 60.0%
CCTTTGCAGACCCGAGTGAC+AGG - chr1_1:9285116-9285135 Msa0006410:intron 60.0%
!! GCGCCACGTCAGCATTGACT+TGG - chr1_1:9286630-9286649 Msa0006410:intron 60.0%
GCTGGTGTGCTTTGTGCTGC+TGG + chr1_1:9289658-9289677 None:intergenic 60.0%
CTTGCTGCGCTGGAGTGCAA+TGG + chr1_1:9289706-9289725 None:intergenic 60.0%
GCAAGCAGTCAGCCAGCAAG+AGG - chr1_1:9289721-9289740 Msa0006410:intron 60.0%
GGCGAAGCAGCACCGTTTCT+GGG - chr1_1:9289900-9289919 Msa0006410:intron 60.0%
AAACAGGAGGGAGCAGGGGA+GGG - chr1_1:9292622-9292641 Msa0006410:CDS 60.0%
TCACCACTGCACTAACGCCC+TGG - chr1_1:9292748-9292767 Msa0006410:intron 60.0%
! ACACCAGGGCGTTAGTGCAG+TGG + chr1_1:9292754-9292773 None:intergenic 60.0%
CTGAAACTGACGCCTCCGGA+TGG + chr1_1:9294509-9294528 None:intergenic 60.0%
GACTCCCAGCGTCCTTGAGT+TGG - chr1_1:9296470-9296489 Msa0006410:intron 60.0%
!! TCCCAGCGTCCTTGAGTTGG+TGG - chr1_1:9296473-9296492 Msa0006410:intron 60.0%
CTCCACCAACTCAAGGACGC+TGG + chr1_1:9296478-9296497 None:intergenic 60.0%
CTCTGCTCTGGTAGGGAAGG+AGG + chr1_1:9296528-9296547 None:intergenic 60.0%
CCGCATCACTCTGCTCTGGT+AGG + chr1_1:9296536-9296555 None:intergenic 60.0%
TGAGAGCTGACAGCACCTGC+AGG + chr1_1:9296669-9296688 None:intergenic 60.0%
GAAGGCGATCCCCCTTGTGG+AGG + chr1_1:9281795-9281814 None:intergenic 65.0%
AGGGAAGGCGATCCCCCTTG+TGG + chr1_1:9281798-9281817 None:intergenic 65.0%
CCGCATCACGCTGCTCAGGT+AGG + chr1_1:9281818-9281837 None:intergenic 65.0%
TGGTCTTCCCCAGCACCTCC+TGG - chr1_1:9282232-9282251 Msa0006410:intron 65.0%
!! GGAAGGCCAGGAGGTACTGG+GGG + chr1_1:9282262-9282281 None:intergenic 65.0%
!! GGGAAGGCCAGGAGGTACTG+GGG + chr1_1:9282263-9282282 None:intergenic 65.0%
!! GGGGAAGGCCAGGAGGTACT+GGG + chr1_1:9282264-9282283 None:intergenic 65.0%
!! GGGGTGGTGGATCTGGTGGT+GGG + chr1_1:9282443-9282462 None:intergenic 65.0%
!! GAAGGGGGTGGTGGATCTGG+TGG + chr1_1:9282447-9282466 None:intergenic 65.0%
! TGGCTGACTGCTTGCTGCGC+TGG + chr1_1:9289716-9289735 None:intergenic 65.0%
!! CGGTGCTGCTTCGCCCTCTA+CGG + chr1_1:9289895-9289914 None:intergenic 65.0%
GGGCGAAGCAGCACCGTTTC+TGG - chr1_1:9289899-9289918 Msa0006410:intron 65.0%
CAAACAGGAGGGAGCAGGGG+AGG - chr1_1:9292621-9292640 Msa0006410:CDS 65.0%
GAAGGAGGTCCTCCCTGTGG+AGG + chr1_1:9296513-9296532 None:intergenic 65.0%
AGGGAAGGAGGTCCTCCCTG+TGG + chr1_1:9296516-9296535 None:intergenic 65.0%
!! GGGCAGTCCAGGAGGTGCTG+GGG + chr1_1:9282242-9282261 None:intergenic 70.0%
!! GGGGCAGTCCAGGAGGTGCT+GGG + chr1_1:9282243-9282262 None:intergenic 70.0%
! GGTACTGGGGGCAGTCCAGG+AGG + chr1_1:9282250-9282269 None:intergenic 70.0%
!! GGAGGTACTGGGGGCAGTCC+AGG + chr1_1:9282253-9282272 None:intergenic 70.0%
GGACTGCCCCCAGTACCTCC+TGG - chr1_1:9282253-9282272 Msa0006410:intron 70.0%
! GGGGGAAGGCCAGGAGGTAC+TGG + chr1_1:9282265-9282284 None:intergenic 70.0%
GATGCTGGGGGAAGGCCAGG+AGG + chr1_1:9282271-9282290 None:intergenic 70.0%
GGAGATGCTGGGGGAAGGCC+AGG + chr1_1:9282274-9282293 None:intergenic 70.0%
GGCCTTCCCCCAGCATCTCC+TGG - chr1_1:9282274-9282293 Msa0006410:intron 70.0%
!! GGTGGTGGGCGTGACAAGGG+AGG + chr1_1:9282429-9282448 None:intergenic 70.0%
!! GGGGGTGGTGGATCTGGTGG+TGG + chr1_1:9282444-9282463 None:intergenic 70.0%
! GGGGGCAGTCCAGGAGGTGC+TGG + chr1_1:9282244-9282263 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 9275161 9297799 9275161 ID=Msa0006410;Name=Msa0006410
chr1_1 mRNA 9275161 9297799 9275161 ID=Msa0006410-mRNA-1;Parent=Msa0006410;Name=Msa0006410-mRNA-1;_AED=0.17;_eAED=0.21;_QI=0|0.33|0.36|0.96|0.62|0.68|25|587|1084
chr1_1 exon 9275161 9275968 9275161 ID=Msa0006410-mRNA-1:exon:3349;Parent=Msa0006410-mRNA-1
chr1_1 exon 9276236 9276287 9276236 ID=Msa0006410-mRNA-1:exon:3348;Parent=Msa0006410-mRNA-1
chr1_1 exon 9276406 9276609 9276406 ID=Msa0006410-mRNA-1:exon:3347;Parent=Msa0006410-mRNA-1
chr1_1 exon 9277330 9277574 9277330 ID=Msa0006410-mRNA-1:exon:3346;Parent=Msa0006410-mRNA-1
chr1_1 exon 9277692 9277751 9277692 ID=Msa0006410-mRNA-1:exon:3345;Parent=Msa0006410-mRNA-1
chr1_1 exon 9277844 9277994 9277844 ID=Msa0006410-mRNA-1:exon:3344;Parent=Msa0006410-mRNA-1
chr1_1 exon 9278127 9278189 9278127 ID=Msa0006410-mRNA-1:exon:3343;Parent=Msa0006410-mRNA-1
chr1_1 exon 9278294 9278463 9278294 ID=Msa0006410-mRNA-1:exon:3342;Parent=Msa0006410-mRNA-1
chr1_1 exon 9279612 9279684 9279612 ID=Msa0006410-mRNA-1:exon:3341;Parent=Msa0006410-mRNA-1
chr1_1 exon 9281233 9281382 9281233 ID=Msa0006410-mRNA-1:exon:3340;Parent=Msa0006410-mRNA-1
chr1_1 exon 9282026 9282182 9282026 ID=Msa0006410-mRNA-1:exon:3339;Parent=Msa0006410-mRNA-1
chr1_1 exon 9282989 9283062 9282989 ID=Msa0006410-mRNA-1:exon:3338;Parent=Msa0006410-mRNA-1
chr1_1 exon 9287725 9287835 9287725 ID=Msa0006410-mRNA-1:exon:3337;Parent=Msa0006410-mRNA-1
chr1_1 exon 9290912 9290920 9290912 ID=Msa0006410-mRNA-1:exon:3336;Parent=Msa0006410-mRNA-1
chr1_1 exon 9291124 9291327 9291124 ID=Msa0006410-mRNA-1:exon:3335;Parent=Msa0006410-mRNA-1
chr1_1 exon 9291866 9291937 9291866 ID=Msa0006410-mRNA-1:exon:3334;Parent=Msa0006410-mRNA-1
chr1_1 exon 9292047 9292179 9292047 ID=Msa0006410-mRNA-1:exon:3333;Parent=Msa0006410-mRNA-1
chr1_1 exon 9292225 9292394 9292225 ID=Msa0006410-mRNA-1:exon:3332;Parent=Msa0006410-mRNA-1
chr1_1 exon 9292400 9292510 9292400 ID=Msa0006410-mRNA-1:exon:3331;Parent=Msa0006410-mRNA-1
chr1_1 exon 9292517 9292723 9292517 ID=Msa0006410-mRNA-1:exon:3330;Parent=Msa0006410-mRNA-1
chr1_1 exon 9292860 9292919 9292860 ID=Msa0006410-mRNA-1:exon:3329;Parent=Msa0006410-mRNA-1
chr1_1 exon 9293023 9293192 9293023 ID=Msa0006410-mRNA-1:exon:3328;Parent=Msa0006410-mRNA-1
chr1_1 exon 9294772 9294925 9294772 ID=Msa0006410-mRNA-1:exon:3327;Parent=Msa0006410-mRNA-1
chr1_1 exon 9295376 9295489 9295376 ID=Msa0006410-mRNA-1:exon:3326;Parent=Msa0006410-mRNA-1
chr1_1 exon 9297680 9297799 9297680 ID=Msa0006410-mRNA-1:exon:3325;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9297680 9297799 9297680 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9295376 9295489 9295376 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9294772 9294925 9294772 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9293023 9293192 9293023 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9292860 9292919 9292860 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9292517 9292723 9292517 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9292400 9292510 9292400 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9292225 9292394 9292225 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9292047 9292179 9292047 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9291866 9291937 9291866 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9291124 9291327 9291124 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9290912 9290920 9290912 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9287725 9287835 9287725 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9282989 9283062 9282989 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9282026 9282182 9282026 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9281233 9281382 9281233 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9279612 9279684 9279612 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9278294 9278463 9278294 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9278127 9278189 9278127 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9277844 9277994 9277844 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9277692 9277751 9277692 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9277330 9277574 9277330 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9276406 9276609 9276406 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9276236 9276287 9276236 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 CDS 9275748 9275968 9275748 ID=Msa0006410-mRNA-1:cds;Parent=Msa0006410-mRNA-1
chr1_1 three_prime_UTR 9275161 9275747 9275161 ID=Msa0006410-mRNA-1:three_prime_utr;Parent=Msa0006410-mRNA-1
Gene Sequence

>Msa0006410

ATGGCTCTTGAGATTGGTTGGAGCAAGGGATTTGGTAAGGCGCTTATTCATTGCGATTCTCAATTGGTTGTTCAAGTGACAACTGATGGTTCCGATTCGTATCATCCCTATGCTAGCATGTTGACTGAACTTCAAGATTCTCTCGAATCTGAAAACCTCATCTCAGAGCTTGTCCATTTCCTTGATTCTTTATCGGATGATGCACTCTCTGATCCATACAATGAACATAAAGAAAAAGTTGTTGACAATCTTTCCGTCGAACTGCCAAAGGCTGTTTCAAAGTTTGCTGGCATTTCAAGTTCTTGTTTGGACATGGCAATTAGCATCATTGATCAGTTTATAGCGAAATGTGGTCCAAAGTACATGCTTTTTGTTCTCTGTTATGTGATCCTTATCTCTACCCAGAGGCGTCAGTTTGAGCACGTAAGAGCAGTTGTTCCTTCGATTCTTAATTCATTGAAGGTTGTACATTTGGAGACAGATAAAGTAATTGTTGATGTCTTTGACAGAGCTGTTGGAATTGCAAATTCTATATATGAAATTTGCAATAAGTTGGTGGATAATGATGCAAGAGAGAAACTCCGAGCTCTTCTTGGTCTATATGTCCTGCAATGCTTGGCTCTTCTTTCAAGTAGCAATATCTATGACTCTCCCAGTTACCATTCGTTAGTACTGCAACTGTCACGAATTTCATCGAATTGTGGTTTATCCTATCTCAGTCTAGTAACAACTTATGATGTTGAGGCTGTGGTTAGTACCGTTTTTGGAGGTAGTACTCTTATCTTAGGTTATGCTGTGTCAGCTTTGCTGTTTATTTATTTCAATTTAGCACCATTTGTTTATACAATTTTTTTTTCATCCATGTCAATTTCCCAGAAAATAACGATGATTGTATGGCTTGTTTTTATCATGTCAAGCATGGTGCCGCTCTTGCAGAAATTACTACTATCAAATCCTTGCCTTTGTGTTATGCATTTCATTCTCACTAACCCATCAAATTCCATTTTTCCAGTGGTTTGGGGGCATGTCTCAGAGGAAGTTGCTCATGCTGCTAAAGAAGATATCATTGCGGTCAAAGATGAGCTTCGTAATAACCAGATCAAAAGGCTGACGTGGGCGTTAAAGAAACATACTATCAACTTCTTGATTAGCATCACAGATGGAGATATCCGTGGAAACTGGGATGATGAACATTCCCAGTGGTCATCTTATATGCCAAATCTTTTCTCAGCTCTGCAGGCTGTTATATTGGCTATCATGGATGCTTTAGACCTAGAACACAGAAATAGTTCCCTTGATGTGTTAAAAGGAATTTCTGTTTTAGTTGATCTTATCCGGAGGGAAATGTACGCAGCAATCTGCAGTTGTACACCAGTAGCAAAAAATGTCCAACAGACTAATAACAAAGCACATCCGTATATATCATTTTGGGTTCCCAATGTCTCTGAGTTGGTGGAGTTAGTACTAAAACCTCCACAAGGGGGATCGCCTTCCCTACCTGAGCAGCGTGATGCGAATCTGCAGACCCGAGTGACAGGTATAATGACAGACAGCAAGAGTTCTGTATGCGACCTAAATCCACTTGAAATGGTGCTGTCTCGGTGTATTGAGCTTGTAGAAGAGAAGCTAAATCAAAGGGCGAAGCAGCACCGTTTCTGGGTTCTGAAGCTCACAATAATATTCAAAGAATTCTCCAATCATGCCCTAAATTGGAAGAAGTTGGAGACTCCTGTGAATATGAAAACACCATCTCAGAGCTTGTCAATTTCCTTGATTCTTTATTGGATGCTGCTCTTTCTGATCCGGACAATGAGCATAAAGAGAACAATGCATTTGAAGCTCTGTCAGAGATTCATCGATACATTTGAAGTTGTCGATGCTCTTTCCTTTGAAGTGCCAAAGGCTGTTTCAAAGTTTGCTGGCATTTCAAGCAAATTTTCGGACATGGCAATTAGCATCATTGATCAGCTCATAGCAAAATGTGGTCCAAGGGATATGCTTTCAATTCTCTGTGATACATTAGGTTACTCAAGTAAGGTGACCAACGCTGCGAGTTACATTGTTCCTCCTTTATCAGGGCTCTCAAAGGTCCTTATATCCATCCGGAGGCGTCAGTTTCAGCAAGTAAAAGAAACCATTCCTATAATTCTTAATGTATTGAAGGCTGTATCTTTGAAGTCAGACGAAGAACTCGATAATGTCTTTGACAGAGCTGTTGAGATTGCAAATTCAATATATGACGTTTGCAATAAGTTGGTGGATGATGATGCTGCAAGGGAGAAGTTCCGATCTCTCCTTGGTCTATATGTCCTGCAGTGCTTGGCTCTTGTTTCAGCTAGTGTAAGCTATACAGCTTCAAGTTGTCATTCGTTAGTACTTCAACTGTCACGAATTGCATCATATTGTGGTTTATCTTATCTCAGTCTAGTTACAACTTATGATGTCGAGGTTGTGGCTAGCACCGTTTTTGGAGAAAATAAAGATGATTATATGGACTGTTTATCTCATATCAAGCATGGTTGCGCTCTTTCAGTTGCCCATGCTGCTAAAGAAGATATGACTGTGGTCAAGGATGAGCTTCGTAATAACCAGATCAAAAGGTGGCAAGCAATAGGAACATTAAAACATGTTCTTTCCTTTGTAAGTCTGCCGTGGGAGTTAAGGAAACATGCTATCAACTTCTTACTTTGCATCACAGATGGCGATATCCGTGGAAACTGCGATGATGAACAGTCCCAGTGGTCGTCATATATGCCAAATCTTTTTTCTGCTCTACAGATTGCCATTTTGGTTGATCTTGTTCGGAGGGAAATGCACACCGAAATCTCCAGTAGTACGTCAGTTGTAAAAGATGTCCAACATATTAATAACAAAGCACATCCAGATATATCATTCTGGACTCCCAGCGTCCTTGAGTTGGTGGAGTCAATTCTAAGACCTCCACAGGGAGGACCTCCTTCCCTACCAGAGCAGAGTGATGCGGTGCTGTCAGCTCTCAACCTATACAGATTTGTAATAATGACAGAATCTACAGGAAAGACAAACTACACTGGAGTCTTGTCGAGGAGTAGTTTAAACAAGGTCTACAATGAATGGCTGCTTCCTTTGCGTACACTAGTGACAGGTATAATGGCAGAGAACAAGAGTGATTATGATGAGCTTGCCATTGATACTCTATGCACCCTTAATCCACTCGAGTTGGTGTTGTATCGGTGCATTGAGCTTGTAGAAGAGAAGCTAAAGCAAGTCACATAA
Protein sequence

>Msa0006410

MALEIGWSKGFGKALIHCDSQLVVQVTTDGSDSYHPYASMLTELQDSLESENLISELVHFLDSLSDDALSDPYNEHKEKVVDNLSVELPKAVSKFAGISSSCLDMAISIIDQFIAKCGPKYMLFVLCYVILISTQRRQFEHVRAVVPSILNSLKVVHLETDKVIVDVFDRAVGIANSIYEICNKLVDNDAREKLRALLGLYVLQCLALLSSSNIYDSPSYHSLVLQLSRISSNCGLSYLSLVTTYDVEAVVSTVFGGSTLILGYAVSALLFIYFNLAPFVYTIFFSSMSISQKITMIVWLVFIMSSMVPLLQKLLLSNPCLCVMHFILTNPSNSIFPVVWGHVSEEVAHAAKEDIIAVKDELRNNQIKRLTWALKKHTINFLISITDGDIRGNWDDEHSQWSSYMPNLFSALQAVILAIMDALDLEHRNSSLDVLKGISVLVDLIRREMYAAICSCTPVAKNVQQTNNKAHPYISFWVPNVSELVELVLKPPQGGSPSLPEQRDANLQTRVTGIMTDSKSSVCDLNPLEMVLSRCIELVEEKLNQRAKQHRFWVLKLTIIFKEFSNHALNWKKLETPVNMKTPSQSLSISLILYWMLLFLIRTMSIKRTMHLKLCQRFIDTFEVVDALSFEVPKAVSKFAGISSKFSDMAISIIDQLIAKCGPRDMLSILCDTLGYSSKVTNAASYIVPPLSGLSKVLISIRRRQFQQVKETIPIILNVLKAVSLKSDEELDNVFDRAVEIANSIYDVCNKLVDDDAAREKFRSLLGLYVLQCLALVSASVSYTASSCHSLVLQLSRIASYCGLSYLSLVTTYDVEVVASTVFGENKDDYMDCLSHIKHGCALSVAHAAKEDMTVVKDELRNNQIKRWQAIGTLKHVLSFVSLPWELRKHAINFLLCITDGDIRGNCDDEQSQWSSYMPNLFSALQIAILVDLVRREMHTEISSSTSVVKDVQHINNKAHPDISFWTPSVLELVESILRPPQGGPPSLPEQSDAVLSALNLYRFVIMTESTGKTNYTGVLSRSSLNKVYNEWLLPLRTLVTGIMAENKSDYDELAIDTLCTLNPLELVLYRCIELVEEKLKQVT*