Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106170 | AES94978.2 | 96.729 | 428 | 6 | 4 | 1 | 427 | 1 | 421 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106170 | sp|O82626|ERG_ANTMA | 64.133 | 421 | 133 | 5 | 16 | 427 | 12 | 423 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106170 | G7KDM7 | 96.729 | 428 | 6 | 4 | 1 | 427 | 1 | 421 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061630 | Msa0106170 | 0.817038 | 4.057616e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106170 | MtrunA17_Chr5g0404241 | 96.729 | 428 | 6 | 4 | 1 | 427 | 1 | 421 | 0.0 | 833 |
| Msa0106170 | MtrunA17_Chr6g0459721 | 95.561 | 428 | 5 | 6 | 1 | 427 | 1 | 415 | 0.0 | 811 |
| Msa0106170 | MtrunA17_Chr1g0161851 | 97.368 | 266 | 5 | 1 | 162 | 427 | 99 | 362 | 0.0 | 524 |
| Msa0106170 | MtrunA17_Chr1g0161851 | 93.333 | 90 | 3 | 3 | 1 | 89 | 1 | 88 | 6.08e-49 | 170 |
| Msa0106170 | MtrunA17_Chr8g0372901 | 25.658 | 304 | 216 | 5 | 124 | 427 | 101 | 394 | 1.19e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106170 | AT1G30960.1 | 64.045 | 445 | 131 | 9 | 1 | 427 | 4 | 437 | 2.75e-180 | 510 |
| Msa0106170 | AT5G66470.2 | 22.609 | 345 | 241 | 8 | 93 | 427 | 77 | 405 | 5.58e-23 | 100 |
| Msa0106170 | AT5G66470.1 | 22.609 | 345 | 241 | 8 | 93 | 427 | 77 | 405 | 5.58e-23 | 100 |
Find 139 sgRNAs with CRISPR-Local
Find 603 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGTCTGTTGGGATTAT+TGG | 0.163623 | 1_3:-15181705 | Msa0106170:CDS |
| TTTAGGCGTTTCATGATATC+TGG | 0.252865 | 1_3:-15175680 | Msa0106170:intron |
| CGAGCCTTGGCATCCTTATA+AGG | 0.255466 | 1_3:+15178353 | None:intergenic |
| ACTTCCTCGGTCATGGTAAA+TGG | 0.262332 | 1_3:+15175318 | None:intergenic |
| GGCATTTGGTTGTATGAAAA+TGG | 0.293668 | 1_3:-15174152 | Msa0106170:three_prime_UTR |
| GAAGGTTGCGTCTGAATGTT+CGG | 0.298343 | 1_3:+15181995 | None:intergenic |
| GCAAGTGCATCTAGTTCTTC+AGG | 0.309721 | 1_3:-15174558 | Msa0106170:CDS |
| TTGTAGCGGATTCCCTTATA+AGG | 0.321115 | 1_3:-15178366 | Msa0106170:CDS |
| GAAGGGGAGAGTGAAGTTTA+AGG | 0.327471 | 1_3:-15181856 | Msa0106170:CDS |
| CACTTTCTCACTAACAAATT+AGG | 0.329869 | 1_3:-15175055 | Msa0106170:CDS |
| ATTAACGAGGCGAATATCTT+TGG | 0.333641 | 1_3:-15174522 | Msa0106170:three_prime_UTR |
| TCCGGCAATCAAATAGTAAA+AGG | 0.340130 | 1_3:+15174299 | None:intergenic |
| AGTTGCGAGATGGTTCTCTT+AGG | 0.351624 | 1_3:-15175087 | Msa0106170:CDS |
| GAAGAATTCGAAGATCTTCC+TGG | 0.354726 | 1_3:-15175835 | Msa0106170:CDS |
| CCGAGACCGGACGGATAAAC+TGG | 0.357157 | 1_3:-15181895 | Msa0106170:CDS |
| TTCTTATTCCACGTCACCTT+CGG | 0.364738 | 1_3:+15181921 | None:intergenic |
| CCTGTTCTCAGGCAAGGTTT+TGG | 0.367068 | 1_3:+15174399 | None:intergenic |
| TTTACCTGGTGATATGTCTA+TGG | 0.367841 | 1_3:+15178270 | None:intergenic |
| TCGTTGTTGTTGTTGAGAAT+TGG | 0.369127 | 1_3:+15181951 | None:intergenic |
| AGATTTGACTCAGTTCTTGA+TGG | 0.373919 | 1_3:-15175636 | Msa0106170:CDS |
| TTCTTCTTCCTCCTCCTCCT+CGG | 0.374286 | 1_3:+15181767 | None:intergenic |
| ATCAGAAGTCTTTGTCTGTT+GGG | 0.378863 | 1_3:-15181713 | Msa0106170:CDS |
| CCAAAACCTTGCCTGAGAAC+AGG | 0.379764 | 1_3:-15174399 | Msa0106170:three_prime_UTR |
| CGTTGTTGTTGTTGAGAATT+GGG | 0.382358 | 1_3:+15181952 | None:intergenic |
| GAATGTTCGGGTTGAGGATC+GGG | 0.385005 | 1_3:+15182008 | None:intergenic |
| TGTTTGTTTAACAGGAGAAT+AGG | 0.397704 | 1_3:-15174620 | Msa0106170:intron |
| TCGGGTTGAGGATCGGGTTC+CGG | 0.405609 | 1_3:+15182014 | None:intergenic |
| GGCGCTTGAGAAGGCTTTGT+TGG | 0.406248 | 1_3:-15181808 | Msa0106170:CDS |
| AAGGTTGCGTCTGAATGTTC+GGG | 0.410075 | 1_3:+15181996 | None:intergenic |
| AGCCAAGTTACTCACAATTT+GGG | 0.415515 | 1_3:+15179365 | None:intergenic |
| TGAATGTTCGGGTTGAGGAT+CGG | 0.418854 | 1_3:+15182007 | None:intergenic |
| GGGTTCCGGTGTGAGGGGTT+CGG | 0.422928 | 1_3:+15182028 | None:intergenic |
| CCAGTTTATCCGTCCGGTCT+CGG | 0.425804 | 1_3:+15181895 | None:intergenic |
| TCTTCTTCCTCCTCCTCCTC+GGG | 0.428481 | 1_3:+15181768 | None:intergenic |
| GCGTCTGAATGTTCGGGTTG+AGG | 0.430265 | 1_3:+15182002 | None:intergenic |
| AGGATCGGGTTCCGGTGTGA+GGG | 0.442223 | 1_3:+15182022 | None:intergenic |
| TGTTGAAAGTGCTTGGAGTT+CGG | 0.448891 | 1_3:-15178330 | Msa0106170:CDS |
| GAAGATTGTGGTGGTGGTGG+TGG | 0.449563 | 1_3:+15182067 | None:intergenic |
| CTATTTGATTGCCGGAGTCT+AGG | 0.452398 | 1_3:-15174292 | Msa0106170:three_prime_UTR |
| ATAAGTGCTATGGAAGAAAC+AGG | 0.452402 | 1_3:-15174361 | Msa0106170:three_prime_UTR |
| AGTGAAGTTTAAGGAGGAAG+AGG | 0.453679 | 1_3:-15181847 | Msa0106170:CDS |
| TAAAAGGCACAACAAATTGC+CGG | 0.454515 | 1_3:+15174315 | None:intergenic |
| AAAATGGTGAGATACGAGTT+TGG | 0.461973 | 1_3:-15174136 | Msa0106170:three_prime_UTR |
| GTGTAATTCACACACCCCTT+TGG | 0.467259 | 1_3:+15174446 | None:intergenic |
| GGCCAACTCAAGATTCTTGT+GGG | 0.471826 | 1_3:-15175034 | Msa0106170:CDS |
| GAGGATCGGGTTCCGGTGTG+AGG | 0.472229 | 1_3:+15182021 | None:intergenic |
| AGTTGTGCGTGAAAGGTTGC+TGG | 0.472622 | 1_3:-15175274 | Msa0106170:CDS |
| TTAAACTTCACTCTCCCCTT+CGG | 0.473137 | 1_3:+15181858 | None:intergenic |
| AGCACTTTCAACACGAGCCT+TGG | 0.476228 | 1_3:+15178340 | None:intergenic |
| TTTCATGATATCTGGAATGA+AGG | 0.478892 | 1_3:-15175672 | Msa0106170:CDS |
| GATCAGAAGTCTTTGTCTGT+TGG | 0.480079 | 1_3:-15181714 | Msa0106170:CDS |
| ATTATTGGTGCTCCTAATGC+TGG | 0.481153 | 1_3:-15181690 | Msa0106170:CDS |
| AATAGGCAGTAGAACGGCCC+TGG | 0.484531 | 1_3:-15175350 | Msa0106170:intron |
| GAAGAAGAAGATGAAGATGT+TGG | 0.484794 | 1_3:-15181753 | Msa0106170:CDS |
| TCTATGATGACCCTGTTCTC+AGG | 0.485261 | 1_3:+15174388 | None:intergenic |
| GAGCCTTGGCATCCTTATAA+GGG | 0.485844 | 1_3:+15178354 | None:intergenic |
| GACTCAGTTCTTGATGGAGC+AGG | 0.486458 | 1_3:-15175630 | Msa0106170:CDS |
| CATAGATAAAATAAGTGCTA+TGG | 0.488073 | 1_3:-15174371 | Msa0106170:three_prime_UTR |
| CATTAGAAGTTGTGCGTGAA+AGG | 0.488172 | 1_3:-15175281 | Msa0106170:CDS |
| GAGTAAACCCGAGGAGGAGG+AGG | 0.490946 | 1_3:-15181775 | Msa0106170:CDS |
| AGACCTTACCTTTCAAATCC+AGG | 0.490953 | 1_3:+15175817 | None:intergenic |
| TTTCATAACTTCCTCGGTCA+TGG | 0.497634 | 1_3:+15175311 | None:intergenic |
| AACCTATGTTCAATATCGTA+TGG | 0.502441 | 1_3:+15175124 | None:intergenic |
| CACCACAACTCATGAAGTTG+TGG | 0.507926 | 1_3:-15179409 | Msa0106170:CDS |
| GTTGCTGGACCATGTACATC+AGG | 0.510248 | 1_3:-15175259 | Msa0106170:intron |
| TTGAACATAGGTTGATTGAC+TGG | 0.510746 | 1_3:-15175114 | Msa0106170:CDS |
| GCGGAAGATTGTGGTGGTGG+TGG | 0.517543 | 1_3:+15182064 | None:intergenic |
| TTCATGATATCTGGAATGAA+GGG | 0.518749 | 1_3:-15175671 | Msa0106170:CDS |
| CTACAATTTAGCACGAGCCC+TGG | 0.523044 | 1_3:+15178383 | None:intergenic |
| GGTTGTTTATGAAAATTGAA+AGG | 0.524496 | 1_3:-15174246 | Msa0106170:three_prime_UTR |
| GGTAAATGGATCTTCTTCCC+AGG | 0.528565 | 1_3:+15175332 | None:intergenic |
| GCAGCATGTAAAATGCCAAA+GGG | 0.531201 | 1_3:-15174461 | Msa0106170:three_prime_UTR |
| CAAAACCTTGCCTGAGAACA+GGG | 0.533313 | 1_3:-15174398 | Msa0106170:three_prime_UTR |
| TGTAAAACTGATCAAGCGAA+TGG | 0.536305 | 1_3:-15175947 | Msa0106170:CDS |
| AAGATCTTCCTGGATTTGAA+AGG | 0.540512 | 1_3:-15175825 | Msa0106170:intron |
| AGGCCAACTCAAGATTCTTG+TGG | 0.543483 | 1_3:-15175035 | Msa0106170:CDS |
| TCCCCACAAGAATCTTGAGT+TGG | 0.544132 | 1_3:+15175032 | None:intergenic |
| AAGAAACAGGTTGAGTTCGT+TGG | 0.544765 | 1_3:-15174348 | Msa0106170:three_prime_UTR |
| ATCCTCTCTCACTAATTACA+TGG | 0.545602 | 1_3:-15181664 | Msa0106170:intron |
| TTAAGGAGGAAGAGGAGGAG+AGG | 0.547469 | 1_3:-15181839 | Msa0106170:CDS |
| GGTGTTCGGCGATGAGCCGA+AGG | 0.548607 | 1_3:-15181874 | Msa0106170:CDS |
| GAAGTTTAAGGAGGAAGAGG+AGG | 0.548933 | 1_3:-15181844 | Msa0106170:CDS |
| GTAAAACTGATCAAGCGAAT+GGG | 0.549419 | 1_3:-15175946 | Msa0106170:CDS |
| GAAAACAAAGGCGCTTGAGA+AGG | 0.554111 | 1_3:-15181817 | Msa0106170:CDS |
| AGGCTCGTGTTGAAAGTGCT+TGG | 0.555577 | 1_3:-15178337 | Msa0106170:CDS |
| AGATGTTGGTGTTGTGAAAG+AGG | 0.559125 | 1_3:-15181739 | Msa0106170:CDS |
| GGGGAGAGTGAAGTTTAAGG+AGG | 0.560952 | 1_3:-15181853 | Msa0106170:CDS |
| CGGACGGATAAACTGGTGTT+CGG | 0.564440 | 1_3:-15181888 | Msa0106170:CDS |
| ATGAAAAGCCGAAGGTGACG+TGG | 0.564826 | 1_3:-15181929 | Msa0106170:CDS |
| CGAACACCAGTTTATCCGTC+CGG | 0.565281 | 1_3:+15181889 | None:intergenic |
| AAGATTCTTGTGGGGAAGCG+TGG | 0.571176 | 1_3:-15175025 | Msa0106170:CDS |
| GTTGAGTAAACCCGAGGAGG+AGG | 0.571215 | 1_3:-15181778 | Msa0106170:CDS |
| GGAATAAGAAATACCGAGAC+CGG | 0.573614 | 1_3:-15181908 | Msa0106170:CDS |
| AGCGCGGAAGATTGTGGTGG+TGG | 0.574708 | 1_3:+15182061 | None:intergenic |
| GAAGAAAGCGCGGAAGATTG+TGG | 0.575424 | 1_3:+15182055 | None:intergenic |
| ACCACAACTCATGAAGTTGT+GGG | 0.577761 | 1_3:-15179408 | Msa0106170:CDS |
| ATCATCATAGGTTGGAACAA+AGG | 0.577776 | 1_3:-15179457 | Msa0106170:intron |
| GACTGGAAAGAGTTGCGAGA+TGG | 0.578343 | 1_3:-15175097 | Msa0106170:CDS |
| TGCAGCATGTAAAATGCCAA+AGG | 0.579327 | 1_3:-15174462 | Msa0106170:three_prime_UTR |
| TAGAAGCTAATGAAGAGCTA+AGG | 0.579922 | 1_3:-15174595 | Msa0106170:CDS |
| GATGACCCTGTTCTCAGGCA+AGG | 0.582636 | 1_3:+15174393 | None:intergenic |
| GGATCGGGTTCCGGTGTGAG+GGG | 0.585238 | 1_3:+15182023 | None:intergenic |
| CAACAATTACCTGATGTACA+TGG | 0.586750 | 1_3:+15175250 | None:intergenic |
| TTCCATACGATATTGAACAT+AGG | 0.595384 | 1_3:-15175126 | Msa0106170:CDS |
| GCCCACAACTTCATGAGTTG+TGG | 0.595586 | 1_3:+15179407 | None:intergenic |
| GTTGTGGGCGTGTTGACTAA+AGG | 0.601040 | 1_3:-15179393 | Msa0106170:CDS |
| TGATCAAGCGAATGGGAGAA+CGG | 0.601143 | 1_3:-15175939 | Msa0106170:CDS |
| ATAGGCAGTAGAACGGCCCT+GGG | 0.601733 | 1_3:-15175349 | Msa0106170:intron |
| CACCATGTAATTAGTGAGAG+AGG | 0.602500 | 1_3:+15181662 | None:intergenic |
| AAAATTGAGTTCCTAGACTC+CGG | 0.604158 | 1_3:+15174281 | None:intergenic |
| GTGTTCGGCGATGAGCCGAA+GGG | 0.604636 | 1_3:-15181873 | Msa0106170:CDS |
| TAAGAAATACCGAGACCGGA+CGG | 0.606280 | 1_3:-15181904 | Msa0106170:CDS |
| CTCCGCCGAACCCCTCACAC+CGG | 0.606587 | 1_3:-15182033 | Msa0106170:CDS |
| GTAAATGGATCTTCTTCCCA+GGG | 0.615060 | 1_3:+15175333 | None:intergenic |
| TTCCGGTGTGAGGGGTTCGG+CGG | 0.620498 | 1_3:+15182031 | None:intergenic |
| TTATGCAATAGGCAGTAGAA+CGG | 0.620601 | 1_3:-15175356 | Msa0106170:intron |
| CTACTATGCAAGAAGAACCA+TGG | 0.626258 | 1_3:+15182159 | None:intergenic |
| AGAGGAGGAGAGGAAAACAA+AGG | 0.628231 | 1_3:-15181829 | Msa0106170:CDS |
| ATGTCCATAGACATATCACC+AGG | 0.629127 | 1_3:-15178274 | Msa0106170:intron |
| ATAGGTTGGAACAAAGGTGG+CGG | 0.633224 | 1_3:-15179451 | Msa0106170:intron |
| TCATGATATCTGGAATGAAG+GGG | 0.634102 | 1_3:-15175670 | Msa0106170:CDS |
| ATCATAGGTTGGAACAAAGG+TGG | 0.643299 | 1_3:-15179454 | Msa0106170:intron |
| ATTCCCTTATAAGGATGCCA+AGG | 0.648726 | 1_3:-15178357 | Msa0106170:CDS |
| TGCGTTGAGTAAACCCGAGG+AGG | 0.651939 | 1_3:-15181781 | Msa0106170:CDS |
| TGTTCGGCGATGAGCCGAAG+GGG | 0.654889 | 1_3:-15181872 | Msa0106170:CDS |
| CAACAACGATGAAAAGCCGA+AGG | 0.666098 | 1_3:-15181937 | Msa0106170:CDS |
| GGGTTAAGAACAGACTGCAA+CGG | 0.670189 | 1_3:+15182213 | None:intergenic |
| CATGATATCTGGAATGAAGG+GGG | 0.674998 | 1_3:-15175669 | Msa0106170:CDS |
| TTCGTAGTGAGAACTGTCGA+AGG | 0.676280 | 1_3:+15181977 | None:intergenic |
| GCCAACTCAAGATTCTTGTG+GGG | 0.679081 | 1_3:-15175033 | Msa0106170:CDS |
| AGCTGCGTTGAGTAAACCCG+AGG | 0.680436 | 1_3:-15181784 | Msa0106170:CDS |
| CAGCATGTAAAATGCCAAAG+GGG | 0.686050 | 1_3:-15174460 | Msa0106170:three_prime_UTR |
| GGGCTCGTGCTAAATTGTAG+CGG | 0.686569 | 1_3:-15178380 | Msa0106170:CDS |
| AGATCCATTTACCATGACCG+AGG | 0.703637 | 1_3:-15175322 | Msa0106170:CDS |
| GAAAGCGCGGAAGATTGTGG+TGG | 0.712487 | 1_3:+15182058 | None:intergenic |
| GTTCGTTGGTGATCTCACGC+CGG | 0.719291 | 1_3:-15174334 | Msa0106170:three_prime_UTR |
| ATGCTGCATAACATGGTGTG+TGG | 0.722838 | 1_3:+15174477 | None:intergenic |
| GTTCGGCGGAGAAGAAAGCG+CGG | 0.728248 | 1_3:+15182045 | None:intergenic |
| TTAAGCTCAAATGATTAACG+AGG | 0.772446 | 1_3:-15174535 | Msa0106170:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAATATTATAAATT+TGG | - | chr1_3:15178833-15178852 | Msa0106170:intron | 0.0% |
| !! | TTTATTAATATTATAAATTT+GGG | - | chr1_3:15178834-15178853 | Msa0106170:intron | 0.0% |
| !! | AATTTCTCAAATAATAAATT+TGG | + | chr1_3:15176110-15176129 | None:intergenic | 10.0% |
| !! | AATAAAATTAAAACAAGTTT+AGG | - | chr1_3:15178267-15178286 | Msa0106170:intron | 10.0% |
| !! | ATAAAATTAAAACAAGTTTA+GGG | - | chr1_3:15178268-15178287 | Msa0106170:intron | 10.0% |
| !! | TTTAAGAAATAAAAATAATG+AGG | - | chr1_3:15178295-15178314 | Msa0106170:CDS | 10.0% |
| !! | TTAAGAAATAAAAATAATGA+GGG | - | chr1_3:15178296-15178315 | Msa0106170:CDS | 10.0% |
| !! | TTAAAACAAAAAATATTGTT+TGG | - | chr1_3:15178952-15178971 | Msa0106170:intron | 10.0% |
| !!! | ATAAATTGATTTTTTTTTTC+TGG | - | chr1_3:15179368-15179387 | Msa0106170:intron | 10.0% |
| !! | ATAAATAATAGATAAAAGTT+GGG | + | chr1_3:15179848-15179867 | None:intergenic | 10.0% |
| !!! | TTATATATAAGCTATTTCTA+TGG | + | chr1_3:15175037-15175056 | None:intergenic | 15.0% |
| !! | TCATTTACTAAATTTATTAC+CGG | + | chr1_3:15175111-15175130 | None:intergenic | 15.0% |
| !!! | TTTATTTCTCAAATGAAATA+AGG | - | chr1_3:15175403-15175422 | Msa0106170:intron | 15.0% |
| !! | ATGAGATGTAATAATTATTT+AGG | - | chr1_3:15175606-15175625 | Msa0106170:intron | 15.0% |
| !! | TGAGATGTAATAATTATTTA+GGG | - | chr1_3:15175607-15175626 | Msa0106170:intron | 15.0% |
| !!! | TTGTTTTTATATGCTTAATT+TGG | - | chr1_3:15177480-15177499 | Msa0106170:intron | 15.0% |
| !!! | TTTTTTTACTTCAATTTTTC+TGG | - | chr1_3:15179393-15179412 | Msa0106170:CDS | 15.0% |
| !!! | TTTTTTACTTCAATTTTTCT+GGG | - | chr1_3:15179394-15179413 | Msa0106170:CDS | 15.0% |
| !! | GATAAATAATAGATAAAAGT+TGG | + | chr1_3:15179849-15179868 | None:intergenic | 15.0% |
| !! | AATGTATAACATTAAAAGAA+TGG | + | chr1_3:15180269-15180288 | None:intergenic | 15.0% |
| !!! | TATTGGCTATTTTATTATTT+AGG | - | chr1_3:15180612-15180631 | Msa0106170:intron | 15.0% |
| !! | TTGTATACAAATTATAGTAT+TGG | - | chr1_3:15180733-15180752 | Msa0106170:intron | 15.0% |
| !! | AATTGTGATTCTATATTTAA+AGG | + | chr1_3:15180811-15180830 | None:intergenic | 15.0% |
| !! | GATTAATTAAAGTTTCTATA+GGG | - | chr1_3:15181570-15181589 | Msa0106170:intron | 15.0% |
| !!! | TTTTATAAAAAACACAACTA+GGG | - | chr1_3:15182136-15182155 | Msa0106170:exon | 15.0% |
| !! | TCATATATCCATAATAAACT+AGG | + | chr1_3:15175203-15175222 | None:intergenic | 20.0% |
| !!! | TTCTTTTATTGGTAGAAAAA+GGG | + | chr1_3:15175334-15175353 | None:intergenic | 20.0% |
| !!! | TTTCTTTTATTGGTAGAAAA+AGG | + | chr1_3:15175335-15175354 | None:intergenic | 20.0% |
| !! | AACTAAATTTCTTAGTAATG+TGG | + | chr1_3:15175429-15175448 | None:intergenic | 20.0% |
| !! | TAGATAATGTACATATTTCT+AGG | + | chr1_3:15175476-15175495 | None:intergenic | 20.0% |
| !! | CATCACAAAAATTAACAAAA+AGG | + | chr1_3:15175589-15175608 | None:intergenic | 20.0% |
| !! | TTCTAACTTCTAAATGAAAA+CGG | + | chr1_3:15175711-15175730 | None:intergenic | 20.0% |
| !! | TTTCATTTAGAAGTTAGAAT+TGG | - | chr1_3:15175712-15175731 | Msa0106170:intron | 20.0% |
| !! | TTCATTTAGAAGTTAGAATT+GGG | - | chr1_3:15175713-15175732 | Msa0106170:intron | 20.0% |
| !! | TGACTGATAATTTCTTTAAT+AGG | - | chr1_3:15176547-15176566 | Msa0106170:intron | 20.0% |
| !! | GACTGATAATTTCTTTAATA+GGG | - | chr1_3:15176548-15176567 | Msa0106170:intron | 20.0% |
| !! | TTTAAATTTCAATCAGCATT+TGG | - | chr1_3:15176788-15176807 | Msa0106170:intron | 20.0% |
| !! | GAAATAACATAAATCATGTT+TGG | + | chr1_3:15176826-15176845 | None:intergenic | 20.0% |
| !!! | TATTTCTGATTTATCATCAT+AGG | - | chr1_3:15176840-15176859 | Msa0106170:intron | 20.0% |
| !!! | ATGTAATTGTATTTTGCAAT+TGG | + | chr1_3:15177414-15177433 | None:intergenic | 20.0% |
| !! | ATTTGAATGAGTCAAATTAT+TGG | - | chr1_3:15177503-15177522 | Msa0106170:intron | 20.0% |
| !! | TTTGAATGAGTCAAATTATT+GGG | - | chr1_3:15177504-15177523 | Msa0106170:intron | 20.0% |
| !! | AGTATATTTACTAAAACCTT+TGG | - | chr1_3:15177768-15177787 | Msa0106170:intron | 20.0% |
| !!! | TTCATTATGTTGTTTTATGA+TGG | - | chr1_3:15177822-15177841 | Msa0106170:intron | 20.0% |
| !!! | TCATTATGTTGTTTTATGAT+GGG | - | chr1_3:15177823-15177842 | Msa0106170:intron | 20.0% |
| !! | TAACAAATGAATTTAGTTGT+AGG | - | chr1_3:15178349-15178368 | Msa0106170:CDS | 20.0% |
| !!! | TATAGTCTTATTTAATCCAA+TGG | - | chr1_3:15178717-15178736 | Msa0106170:intron | 20.0% |
| !! | CTATATATCTTTGTAAAATC+TGG | + | chr1_3:15179116-15179135 | None:intergenic | 20.0% |
| !! | AGTTAAGTAAATGAATAAAG+TGG | + | chr1_3:15179173-15179192 | None:intergenic | 20.0% |
| !! | ATAGTTGTTAACATAGAAAT+AGG | - | chr1_3:15179477-15179496 | Msa0106170:intron | 20.0% |
| !! | AAAGTTTAACAATTTGATAC+AGG | - | chr1_3:15179598-15179617 | Msa0106170:intron | 20.0% |
| !!! | TTTTCGGGAAAAAATTTATA+GGG | + | chr1_3:15179690-15179709 | None:intergenic | 20.0% |
| !!! | ATTTTCGGGAAAAAATTTAT+AGG | + | chr1_3:15179691-15179710 | None:intergenic | 20.0% |
| !! | ATTGATGGAATGTTAAAAAA+AGG | + | chr1_3:15180323-15180342 | None:intergenic | 20.0% |
| !!! | TTTTAACATTCCATCAATAT+AGG | - | chr1_3:15180325-15180344 | Msa0106170:intron | 20.0% |
| !!! | TTAATTGTTTGTTATGCAAT+AGG | - | chr1_3:15180942-15180961 | Msa0106170:intron | 20.0% |
| !! | GATTAGATAATAGTGTTTAT+TGG | - | chr1_3:15181135-15181154 | Msa0106170:intron | 20.0% |
| !!! | AATAATGTCATATCTAAAAC+AGG | + | chr1_3:15181369-15181388 | None:intergenic | 20.0% |
| !!! | TGTTTTAGATATGACATTAT+TGG | - | chr1_3:15181368-15181387 | Msa0106170:intron | 20.0% |
| !! | TTGAGTTTAGACATAAAATA+TGG | - | chr1_3:15181402-15181421 | Msa0106170:intron | 20.0% |
| !! | TGAGTTTAGACATAAAATAT+GGG | - | chr1_3:15181403-15181422 | Msa0106170:intron | 20.0% |
| !! | CGATTAATTAAAGTTTCTAT+AGG | - | chr1_3:15181569-15181588 | Msa0106170:intron | 20.0% |
| !!! | CTCAATTTTCTTTAAGTTTA+TGG | - | chr1_3:15182042-15182061 | Msa0106170:CDS | 20.0% |
| !!! | GTTTTATAAAAAACACAACT+AGG | - | chr1_3:15182135-15182154 | Msa0106170:exon | 20.0% |
| !! | AGAAACGATTTTTGTGTTTT+GGG | + | chr1_3:15174129-15174148 | None:intergenic | 25.0% |
| !! | AAGAAACGATTTTTGTGTTT+TGG | + | chr1_3:15174130-15174149 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTGAAGATTCTTA+AGG | + | chr1_3:15174194-15174213 | None:intergenic | 25.0% |
| ! | GTAAATGAATGTAACTGTTT+CGG | - | chr1_3:15175123-15175142 | Msa0106170:CDS | 25.0% |
| !!! | ATGATAAACCATTTTTTGGT+GGG | + | chr1_3:15175178-15175197 | None:intergenic | 25.0% |
| !!! | TATGATAAACCATTTTTTGG+TGG | + | chr1_3:15175179-15175198 | None:intergenic | 25.0% |
| ! | TATCATAGCCTAGTTTATTA+TGG | - | chr1_3:15175192-15175211 | Msa0106170:intron | 25.0% |
| !!! | TTCGTTTTTGTTTGTTTGTT+TGG | - | chr1_3:15175298-15175317 | Msa0106170:CDS | 25.0% |
| !!! | TCGTTTTTGTTTGTTTGTTT+GGG | - | chr1_3:15175299-15175318 | Msa0106170:CDS | 25.0% |
| ! | TAAAATCCACTCCAAAAATT+TGG | + | chr1_3:15175368-15175387 | None:intergenic | 25.0% |
| ! | TACTAATGATGTTATTCTCA+TGG | + | chr1_3:15175521-15175540 | None:intergenic | 25.0% |
| !!! | GATTTTATTTCCATCTTGTA+AGG | - | chr1_3:15176632-15176651 | Msa0106170:intron | 25.0% |
| ! | TAGAACATGATAATATTGAG+TGG | + | chr1_3:15176666-15176685 | None:intergenic | 25.0% |
| ! | AAGTAGTAGATGCAATAAAT+TGG | - | chr1_3:15177040-15177059 | Msa0106170:intron | 25.0% |
| ! | CTATATCAATTATGTTTGAC+TGG | - | chr1_3:15177165-15177184 | Msa0106170:intron | 25.0% |
| ! | CAAAAAAAACCATGTTTCAT+TGG | + | chr1_3:15177249-15177268 | None:intergenic | 25.0% |
| !!! | ATATATTTGTGCTTTAGAAC+TGG | - | chr1_3:15177327-15177346 | Msa0106170:intron | 25.0% |
| ! | ATGAAGCAGTGATATTAATT+TGG | + | chr1_3:15177675-15177694 | None:intergenic | 25.0% |
| ! | ATAATGAAACAGTAAGATCA+TGG | + | chr1_3:15177810-15177829 | None:intergenic | 25.0% |
| ! | ATTAAACAAAACACTTTACC+TGG | + | chr1_3:15178056-15178075 | None:intergenic | 25.0% |
| !!! | AAAGTGTTTTGTTTAATCTG+AGG | - | chr1_3:15178059-15178078 | Msa0106170:intron | 25.0% |
| ! | TATTTAATCCAATGGTATAG+TGG | + | chr1_3:15178120-15178139 | None:intergenic | 25.0% |
| !!! | TATGGTCTTATTTAATCCAA+TGG | + | chr1_3:15178128-15178147 | None:intergenic | 25.0% |
| !!! | TTCCATTTTTTCAATTCAGT+GGG | + | chr1_3:15178231-15178250 | None:intergenic | 25.0% |
| !!! | TTTCCATTTTTTCAATTCAG+TGG | + | chr1_3:15178232-15178251 | None:intergenic | 25.0% |
| !! | GGATGAAAATGAGTATTTTT+AGG | - | chr1_3:15178317-15178336 | Msa0106170:CDS | 25.0% |
| ! | TGAATTTAGTTGTAGGAATT+AGG | - | chr1_3:15178356-15178375 | Msa0106170:CDS | 25.0% |
| !!! | TTTTCTTTGGGTTTAGTTTT+TGG | - | chr1_3:15178380-15178399 | Msa0106170:CDS | 25.0% |
| !!! | TTTCTTTGGGTTTAGTTTTT+GGG | - | chr1_3:15178381-15178400 | Msa0106170:CDS | 25.0% |
| ! | AAGATATGATTTAGATCTGA+AGG | - | chr1_3:15178496-15178515 | Msa0106170:intron | 25.0% |
| !! | AATCAAGAAGTATATTAGAC+TGG | - | chr1_3:15179508-15179527 | Msa0106170:intron | 25.0% |
| !! | ATCAAGAAGTATATTAGACT+GGG | - | chr1_3:15179509-15179528 | Msa0106170:intron | 25.0% |
| !! | AATATGGACCTCTTTTTAAA+GGG | + | chr1_3:15179660-15179679 | None:intergenic | 25.0% |
| !! | TAATATGGACCTCTTTTTAA+AGG | + | chr1_3:15179661-15179680 | None:intergenic | 25.0% |
| ! | TTTAAAAAGAGGTCCATATT+AGG | - | chr1_3:15179660-15179679 | Msa0106170:intron | 25.0% |
| ! | TTAAAAAGAGGTCCATATTA+GGG | - | chr1_3:15179661-15179680 | Msa0106170:intron | 25.0% |
| !!! | AGTTTCGTATTTGGAATTTT+CGG | + | chr1_3:15179706-15179725 | None:intergenic | 25.0% |
| !!! | AACAACATAGTCACTTTTAT+AGG | + | chr1_3:15179765-15179784 | None:intergenic | 25.0% |
| ! | ATTATTTATCCAAGCAAAGA+TGG | - | chr1_3:15179859-15179878 | Msa0106170:intron | 25.0% |
| ! | TTATCTGCTTAACTTATAGT+TGG | - | chr1_3:15180030-15180049 | Msa0106170:intron | 25.0% |
| ! | TATCTGCTTAACTTATAGTT+GGG | - | chr1_3:15180031-15180050 | Msa0106170:intron | 25.0% |
| ! | GGAATGTTAAAAAAAGGAAT+GGG | + | chr1_3:15180317-15180336 | None:intergenic | 25.0% |
| ! | TGGAATGTTAAAAAAAGGAA+TGG | + | chr1_3:15180318-15180337 | None:intergenic | 25.0% |
| !!! | TTATAGTATTGGTAACTTCA+AGG | - | chr1_3:15180744-15180763 | Msa0106170:intron | 25.0% |
| !! | AAACATCAATGTTCTTTTCT+GGG | - | chr1_3:15180767-15180786 | Msa0106170:intron | 25.0% |
| ! | GTGATTCTATATTTAAAGGT+GGG | + | chr1_3:15180807-15180826 | None:intergenic | 25.0% |
| ! | TGTGATTCTATATTTAAAGG+TGG | + | chr1_3:15180808-15180827 | None:intergenic | 25.0% |
| ! | GAGAAATAAATTCATATGCA+TGG | + | chr1_3:15180848-15180867 | None:intergenic | 25.0% |
| ! | TAAAATCCAATGTTAAGTCT+TGG | + | chr1_3:15180925-15180944 | None:intergenic | 25.0% |
| !! | TATCATTTTCATAACTTCCT+CGG | + | chr1_3:15181007-15181026 | None:intergenic | 25.0% |
| ! | ACTTTAATTAATCGACCAAA+AGG | + | chr1_3:15181563-15181582 | None:intergenic | 25.0% |
| ! | AAGAAACTGAAGTAAATAAG+AGG | + | chr1_3:15181634-15181653 | None:intergenic | 25.0% |
| ! | TGTTAAACAAACATGAATAG+GGG | + | chr1_3:15181682-15181701 | None:intergenic | 25.0% |
| ! | CTGTTAAACAAACATGAATA+GGG | + | chr1_3:15181683-15181702 | None:intergenic | 25.0% |
| ! | CATAGATAAAATAAGTGCTA+TGG | - | chr1_3:15181938-15181957 | Msa0106170:CDS | 25.0% |
| ! | GGTTGTTTATGAAAATTGAA+AGG | - | chr1_3:15182063-15182082 | Msa0106170:CDS | 25.0% |
| !!! | TTTTGTGTTTTGGGGTTTAA+GGG | + | chr1_3:15174120-15174139 | None:intergenic | 30.0% |
| !!! | TTTTTGTGTTTTGGGGTTTA+AGG | + | chr1_3:15174121-15174140 | None:intergenic | 30.0% |
| ! | GAAACGATTTTTGTGTTTTG+GGG | + | chr1_3:15174128-15174147 | None:intergenic | 30.0% |
| !!! | AAAACAGCTTTTAGCTTACA+TGG | - | chr1_3:15174985-15175004 | Msa0106170:intron | 30.0% |
| !!! | TGATAAACCATTTTTTGGTG+GGG | + | chr1_3:15175177-15175196 | None:intergenic | 30.0% |
| !!! | GGCTATGATAAACCATTTTT+TGG | + | chr1_3:15175182-15175201 | None:intergenic | 30.0% |
| AAGCAAAGGAAATACAATCA+GGG | + | chr1_3:15175232-15175251 | None:intergenic | 30.0% | |
| AAAGCAAAGGAAATACAATC+AGG | + | chr1_3:15175233-15175252 | None:intergenic | 30.0% | |
| !! | CGTTTTTGTTTGTTTGTTTG+GGG | - | chr1_3:15175300-15175319 | Msa0106170:CDS | 30.0% |
| TTACTTAAATTGGTTACCCA+AGG | + | chr1_3:15175639-15175658 | None:intergenic | 30.0% | |
| TTGGGTAACCAATTTAAGTA+AGG | - | chr1_3:15175638-15175657 | Msa0106170:CDS | 30.0% | |
| TGGGTAACCAATTTAAGTAA+GGG | - | chr1_3:15175639-15175658 | Msa0106170:CDS | 30.0% | |
| ! | AATAAGTTGAAACCAACTTG+TGG | - | chr1_3:15175747-15175766 | Msa0106170:intron | 30.0% |
| ! | CTATTTTATTATCTCTCCCA+GGG | - | chr1_3:15175781-15175800 | Msa0106170:intron | 30.0% |
| GTTTAAATAGGCAAGCTATT+CGG | - | chr1_3:15175866-15175885 | Msa0106170:CDS | 30.0% | |
| !! | AATAGTTCTAGATGAAGTTG+AGG | - | chr1_3:15175992-15176011 | Msa0106170:intron | 30.0% |
| GAACTGAGTTCAATTTATGT+GGG | - | chr1_3:15176020-15176039 | Msa0106170:intron | 30.0% | |
| GTTAAAGATTTGTCTAGGAA+GGG | - | chr1_3:15176282-15176301 | Msa0106170:intron | 30.0% | |
| CAAATCCTTTCCATTATTGA+GGG | + | chr1_3:15176330-15176349 | None:intergenic | 30.0% | |
| GATAAACCATCATTCCATAT+CGG | + | chr1_3:15176392-15176411 | None:intergenic | 30.0% | |
| !!! | GAGGTTTTAGTTAGAAAAGT+TGG | - | chr1_3:15176580-15176599 | Msa0106170:intron | 30.0% |
| TCTGATTTATCATCATAGGT+TGG | - | chr1_3:15176844-15176863 | Msa0106170:intron | 30.0% | |
| TTTATTTCGTCGTGTGTAAA+AGG | - | chr1_3:15176973-15176992 | Msa0106170:intron | 30.0% | |
| TTATTTCGTCGTGTGTAAAA+GGG | - | chr1_3:15176974-15176993 | Msa0106170:intron | 30.0% | |
| TTTCCATCTTAGTCAGAATA+CGG | - | chr1_3:15177090-15177109 | Msa0106170:intron | 30.0% | |
| GTATTCAATAGTATCAGTGA+AGG | - | chr1_3:15177192-15177211 | Msa0106170:intron | 30.0% | |
| GTCAAATTATTGGGAAGAAA+AGG | - | chr1_3:15177513-15177532 | Msa0106170:intron | 30.0% | |
| TGGCTTCATTTATTATAAGC+TGG | + | chr1_3:15177553-15177572 | None:intergenic | 30.0% | |
| ! | GCAGTGATATTAATTTGGTA+GGG | + | chr1_3:15177670-15177689 | None:intergenic | 30.0% |
| ! | AGCAGTGATATTAATTTGGT+AGG | + | chr1_3:15177671-15177690 | None:intergenic | 30.0% |
| TCACAAATAAGGAGATCATA+TGG | + | chr1_3:15178699-15178718 | None:intergenic | 30.0% | |
| ! | TAGGAATTAGGCTTTTCTTT+GGG | - | chr1_3:15178368-15178387 | Msa0106170:CDS | 30.0% |
| ATAATGCTCTAGTAGTGTAT+GGG | + | chr1_3:15178458-15178477 | None:intergenic | 30.0% | |
| AATAATGCTCTAGTAGTGTA+TGG | + | chr1_3:15178459-15178478 | None:intergenic | 30.0% | |
| GAGGAGTAAATATTCATATG+TGG | - | chr1_3:15178557-15178576 | Msa0106170:intron | 30.0% | |
| ATATGTGGTTGTAGAACAAT+CGG | - | chr1_3:15178572-15178591 | Msa0106170:intron | 30.0% | |
| TTCAGAGAAGATATTAGATC+TGG | - | chr1_3:15178671-15178690 | Msa0106170:intron | 30.0% | |
| TATTAATCGGTTACATTACC+TGG | + | chr1_3:15178924-15178943 | None:intergenic | 30.0% | |
| AACTTAACAAACTAGTGTGT+TGG | + | chr1_3:15179053-15179072 | None:intergenic | 30.0% | |
| !!! | TTCCAAGTTTTAAAGCTTGA+TGG | - | chr1_3:15179195-15179214 | Msa0106170:intron | 30.0% |
| !! | TTCCATCAAGCTTTAAAACT+TGG | + | chr1_3:15179200-15179219 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTTCTTCTGACAT+CGG | - | chr1_3:15179235-15179254 | Msa0106170:intron | 30.0% |
| !! | TTTGTTTTTCTTCTGACATC+GGG | - | chr1_3:15179236-15179255 | Msa0106170:intron | 30.0% |
| ACATGTTCTTCAATTAGATC+TGG | + | chr1_3:15179270-15179289 | None:intergenic | 30.0% | |
| ! | TTTACTTCAATTTTTCTGGG+AGG | - | chr1_3:15179397-15179416 | Msa0106170:CDS | 30.0% |
| ! | TCAAGAAGTATATTAGACTG+GGG | - | chr1_3:15179510-15179529 | Msa0106170:intron | 30.0% |
| TTTATAGGGTAACCCTAATA+TGG | + | chr1_3:15179676-15179695 | None:intergenic | 30.0% | |
| !! | GTTTCGTATTTGGAATTTTC+GGG | + | chr1_3:15179705-15179724 | None:intergenic | 30.0% |
| TTTAACACGAGTTTCGTATT+TGG | + | chr1_3:15179715-15179734 | None:intergenic | 30.0% | |
| AAAATTGTTTACCCTGAATC+TGG | - | chr1_3:15179732-15179751 | Msa0106170:intron | 30.0% | |
| TGACTATGTTGTTGCTAAAT+TGG | - | chr1_3:15179772-15179791 | Msa0106170:intron | 30.0% | |
| !! | TTTGATTTGAATGCTGAGTA+TGG | - | chr1_3:15179944-15179963 | Msa0106170:intron | 30.0% |
| ! | AGTTTTACAACTCTTGAATC+AGG | + | chr1_3:15180351-15180370 | None:intergenic | 30.0% |
| GAAAAAGAAAGACTTAACGA+AGG | - | chr1_3:15180446-15180465 | Msa0106170:intron | 30.0% | |
| ! | TTGCTGTTGTATGAAGATTA+AGG | - | chr1_3:15180517-15180536 | Msa0106170:intron | 30.0% |
| TGCTGTTGTATGAAGATTAA+GGG | - | chr1_3:15180518-15180537 | Msa0106170:intron | 30.0% | |
| ! | CATCTTAAACTTGCTTCTAT+TGG | - | chr1_3:15180595-15180614 | Msa0106170:intron | 30.0% |
| ! | TTTCATGATATCTGGAATGA+AGG | - | chr1_3:15180637-15180656 | Msa0106170:intron | 30.0% |
| ! | TTCATGATATCTGGAATGAA+GGG | - | chr1_3:15180638-15180657 | Msa0106170:intron | 30.0% |
| ! | GAAACATCAATGTTCTTTTC+TGG | - | chr1_3:15180766-15180785 | Msa0106170:intron | 30.0% |
| ! | GCTAACAATTTTCTCAATTC+AGG | - | chr1_3:15181157-15181176 | Msa0106170:intron | 30.0% |
| TTCCATACGATATTGAACAT+AGG | - | chr1_3:15181183-15181202 | Msa0106170:intron | 30.0% | |
| AACCTATGTTCAATATCGTA+TGG | + | chr1_3:15181188-15181207 | None:intergenic | 30.0% | |
| CACTTTCTCACTAACAAATT+AGG | - | chr1_3:15181254-15181273 | Msa0106170:intron | 30.0% | |
| ACAGATGGAGATAATATCTA+CGG | + | chr1_3:15181433-15181452 | None:intergenic | 30.0% | |
| AAACATACAACAGAAACAGA+TGG | + | chr1_3:15181448-15181467 | None:intergenic | 30.0% | |
| !! | ATCTGTTTCTGTTGTATGTT+TGG | - | chr1_3:15181447-15181466 | Msa0106170:intron | 30.0% |
| !! | AGTTTTGACCTATGGAAAAT+GGG | + | chr1_3:15181478-15181497 | None:intergenic | 30.0% |
| !! | AAGTTTTGACCTATGGAAAA+TGG | + | chr1_3:15181479-15181498 | None:intergenic | 30.0% |
| !!! | TCTCGTTTTTTATCCATCTT+AGG | - | chr1_3:15181602-15181621 | Msa0106170:intron | 30.0% |
| CCTGTTAAACAAACATGAAT+AGG | + | chr1_3:15181684-15181703 | None:intergenic | 30.0% | |
| CCTATTCATGTTTGTTTAAC+AGG | - | chr1_3:15181681-15181700 | Msa0106170:CDS | 30.0% | |
| TGTTTGTTTAACAGGAGAAT+AGG | - | chr1_3:15181689-15181708 | Msa0106170:CDS | 30.0% | |
| !!! | ATGCACTTGCTTTTTGAAAA+TGG | + | chr1_3:15181741-15181760 | None:intergenic | 30.0% |
| TTAAGCTCAAATGATTAACG+AGG | - | chr1_3:15181774-15181793 | Msa0106170:CDS | 30.0% | |
| ! | ATTTTACATGCTGCATAACA+TGG | + | chr1_3:15181842-15181861 | None:intergenic | 30.0% |
| !!! | TTTGTGTTTTGGGGTTTAAG+GGG | + | chr1_3:15174119-15174138 | None:intergenic | 35.0% |
| CACAAAAATCGTTTCTTCCA+TGG | - | chr1_3:15174133-15174152 | Msa0106170:three_prime_UTR | 35.0% | |
| ! | CGTTGTTGTTGTTGAGAATT+GGG | + | chr1_3:15174360-15174379 | None:intergenic | 35.0% |
| ! | TCGTTGTTGTTGTTGAGAAT+TGG | + | chr1_3:15174361-15174380 | None:intergenic | 35.0% |
| GAAGAAGAAGATGAAGATGT+TGG | - | chr1_3:15174556-15174575 | Msa0106170:CDS | 35.0% | |
| ATCAGAAGTCTTTGTCTGTT+GGG | - | chr1_3:15174596-15174615 | Msa0106170:CDS | 35.0% | |
| TCTTTGTCTGTTGGGATTAT+TGG | - | chr1_3:15174604-15174623 | Msa0106170:CDS | 35.0% | |
| ATCCTCTCTCACTAATTACA+TGG | - | chr1_3:15174645-15174664 | Msa0106170:intron | 35.0% | |
| AGAGAGCTTATGAAAACATG+AGG | - | chr1_3:15174816-15174835 | Msa0106170:intron | 35.0% | |
| GAGAGCTTATGAAAACATGA+GGG | - | chr1_3:15174817-15174836 | Msa0106170:intron | 35.0% | |
| TGAACTTATGTGAGACTGTT+TGG | - | chr1_3:15174881-15174900 | Msa0106170:intron | 35.0% | |
| GAACTTATGTGAGACTGTTT+GGG | - | chr1_3:15174882-15174901 | Msa0106170:intron | 35.0% | |
| CTGTTTGGATAAACAGCTTA+TGG | + | chr1_3:15175069-15175088 | None:intergenic | 35.0% | |
| !!! | GATAAACCATTTTTTGGTGG+GGG | + | chr1_3:15175176-15175195 | None:intergenic | 35.0% |
| AGCAAAGGAAATACAATCAG+GGG | + | chr1_3:15175231-15175250 | None:intergenic | 35.0% | |
| ACGAAAAACTAGAAACCTGT+TGG | + | chr1_3:15175283-15175302 | None:intergenic | 35.0% | |
| ! | TGGGGAAGCTTTTCTTTTAT+TGG | + | chr1_3:15175345-15175364 | None:intergenic | 35.0% |
| ATCCACTCCAAAAATTTGGT+GGG | + | chr1_3:15175364-15175383 | None:intergenic | 35.0% | |
| AATCCACTCCAAAAATTTGG+TGG | + | chr1_3:15175365-15175384 | None:intergenic | 35.0% | |
| ! | CATTATCTAAAGTGCCCTTT+AGG | - | chr1_3:15175487-15175506 | Msa0106170:intron | 35.0% |
| ACAGAAGCCCTTACTTAAAT+TGG | + | chr1_3:15175649-15175668 | None:intergenic | 35.0% | |
| !! | GCTATTTTATTATCTCTCCC+AGG | - | chr1_3:15175780-15175799 | Msa0106170:intron | 35.0% |
| TCTTCCAAACACACCTAAAT+GGG | - | chr1_3:15175843-15175862 | Msa0106170:CDS | 35.0% | |
| CACCTAAATGGGGTTTAAAT+AGG | - | chr1_3:15175854-15175873 | Msa0106170:CDS | 35.0% | |
| TGCCTATTTAAACCCCATTT+AGG | + | chr1_3:15175859-15175878 | None:intergenic | 35.0% | |
| TACAAGGAGAGACTTACAAA+GGG | + | chr1_3:15175961-15175980 | None:intergenic | 35.0% | |
| ATACAAGGAGAGACTTACAA+AGG | + | chr1_3:15175962-15175981 | None:intergenic | 35.0% | |
| CTATTGCACACAATGATACA+AGG | + | chr1_3:15175977-15175996 | None:intergenic | 35.0% | |
| GGAACTGAGTTCAATTTATG+TGG | - | chr1_3:15176019-15176038 | Msa0106170:intron | 35.0% | |
| TATAGAGTAGCAGATACCTT+TGG | - | chr1_3:15176145-15176164 | Msa0106170:intron | 35.0% | |
| ATAGAGTAGCAGATACCTTT+GGG | - | chr1_3:15176146-15176165 | Msa0106170:intron | 35.0% | |
| ACAAAGAAACCTAATCCCAA+AGG | + | chr1_3:15176164-15176183 | None:intergenic | 35.0% | |
| ACACATATCAGACACACATA+CGG | - | chr1_3:15176257-15176276 | Msa0106170:intron | 35.0% | |
| GGTTAAAGATTTGTCTAGGA+AGG | - | chr1_3:15176281-15176300 | Msa0106170:intron | 35.0% | |
| CCAAATCCTTTCCATTATTG+AGG | + | chr1_3:15176331-15176350 | None:intergenic | 35.0% | |
| ! | CCTCAATAATGGAAAGGATT+TGG | - | chr1_3:15176328-15176347 | Msa0106170:intron | 35.0% |
| TGTTGGTATAGAGGTGAAAA+GGG | - | chr1_3:15176450-15176469 | Msa0106170:intron | 35.0% | |
| !! | TTTAATAGGGAGCATTTGAG+AGG | - | chr1_3:15176561-15176580 | Msa0106170:intron | 35.0% |
| AACTAATAGATCCCTTTCTG+AGG | + | chr1_3:15176611-15176630 | None:intergenic | 35.0% | |
| ATCTCTGGTTGTAACTTATG+AGG | - | chr1_3:15176739-15176758 | Msa0106170:intron | 35.0% | |
| ! | ATCATCATAGGTTGGAACAA+AGG | - | chr1_3:15176852-15176871 | Msa0106170:intron | 35.0% |
| AGCCAAGTTACTCACAATTT+GGG | + | chr1_3:15176947-15176966 | None:intergenic | 35.0% | |
| TTCCATCTTAGTCAGAATAC+GGG | - | chr1_3:15177091-15177110 | Msa0106170:intron | 35.0% | |
| CATACATCTGTTTGATTGCA+TGG | - | chr1_3:15177114-15177133 | Msa0106170:intron | 35.0% | |
| !! | ATTTGTGCTTTAGAACTGGT+AGG | - | chr1_3:15177331-15177350 | Msa0106170:intron | 35.0% |
| !! | TTTGTGCTTTAGAACTGGTA+GGG | - | chr1_3:15177332-15177351 | Msa0106170:intron | 35.0% |
| ATTCAAGAAAAAAGCAGCAG+TGG | + | chr1_3:15177573-15177592 | None:intergenic | 35.0% | |
| AGAGATCATGTAAACCTGTA+TGG | - | chr1_3:15177614-15177633 | Msa0106170:intron | 35.0% | |
| ATCATGTAAACCTGTATGGT+AGG | - | chr1_3:15177618-15177637 | Msa0106170:intron | 35.0% | |
| AACCAAACACAGATGACAAA+AGG | + | chr1_3:15177735-15177754 | None:intergenic | 35.0% | |
| CTAAAGTAGTGAATCTCCAA+AGG | + | chr1_3:15177787-15177806 | None:intergenic | 35.0% | |
| ATTTGACAACGCAGTTTACA+TGG | - | chr1_3:15177852-15177871 | Msa0106170:intron | 35.0% | |
| !!! | AGTGTTTTTTTGATACGCCA+GGG | - | chr1_3:15177909-15177928 | Msa0106170:intron | 35.0% |
| TTTACCTGGTGATATGTCTA+TGG | + | chr1_3:15178042-15178061 | None:intergenic | 35.0% | |
| AATCTGAGGAAATACTCTGA+TGG | - | chr1_3:15178073-15178092 | Msa0106170:intron | 35.0% | |
| AAGAGATATTAGATCCAGTG+TGG | + | chr1_3:15178169-15178188 | None:intergenic | 35.0% | |
| TGCCCACTGAATTGAAAAAA+TGG | - | chr1_3:15178226-15178245 | Msa0106170:intron | 35.0% | |
| ! | GTAGGAATTAGGCTTTTCTT+TGG | - | chr1_3:15178367-15178386 | Msa0106170:CDS | 35.0% |
| TAGAAGATATCAACATCGTG+CGG | + | chr1_3:15178435-15178454 | None:intergenic | 35.0% | |
| TATCTTTCATTCTCTCTCGA+AGG | + | chr1_3:15178482-15178501 | None:intergenic | 35.0% | |
| ATCTGGTATGCTCACAAATA+AGG | - | chr1_3:15178688-15178707 | Msa0106170:intron | 35.0% | |
| TCCAATGGTCAAATATAGTG+TGG | - | chr1_3:15178732-15178751 | Msa0106170:intron | 35.0% | |
| ACCACACTATATTTGACCAT+TGG | + | chr1_3:15178736-15178755 | None:intergenic | 35.0% | |
| TCAAATATAGTGTGGTACAC+CGG | - | chr1_3:15178740-15178759 | Msa0106170:intron | 35.0% | |
| ! | TTCCTAAAGGGTGCATATTA+GGG | + | chr1_3:15178863-15178882 | None:intergenic | 35.0% |
| ! | TTTCCTAAAGGGTGCATATT+AGG | + | chr1_3:15178864-15178883 | None:intergenic | 35.0% |
| ! | AATATGCACCCTTTAGGAAA+TGG | - | chr1_3:15178864-15178883 | Msa0106170:intron | 35.0% |
| AGATAGAGGCAGCAATAAAT+GGG | + | chr1_3:15178990-15179009 | None:intergenic | 35.0% | |
| TTAACAAACTAGTGTGTTGG+AGG | + | chr1_3:15179050-15179069 | None:intergenic | 35.0% | |
| TGAGAGTTAGATAAATCCGT+CGG | - | chr1_3:15179310-15179329 | Msa0106170:intron | 35.0% | |
| TGTTATTCTGCTCAACTTGT+CGG | + | chr1_3:15179572-15179591 | None:intergenic | 35.0% | |
| AATTTGATACAGGCAATAGC+CGG | - | chr1_3:15179608-15179627 | Msa0106170:intron | 35.0% | |
| !! | CTTTTTAAAGGGTCCAAACA+TGG | + | chr1_3:15179649-15179668 | None:intergenic | 35.0% |
| ! | TGTTTGGACCCTTTAAAAAG+AGG | - | chr1_3:15179649-15179668 | Msa0106170:intron | 35.0% |
| ! | TAGGCTTTTTACCAGATTCA+GGG | + | chr1_3:15179746-15179765 | None:intergenic | 35.0% |
| ! | ATAGGCTTTTTACCAGATTC+AGG | + | chr1_3:15179747-15179766 | None:intergenic | 35.0% |
| ! | GCTTCATTTGCCACTTAAAA+TGG | - | chr1_3:15179794-15179813 | Msa0106170:intron | 35.0% |
| ! | CTCTTGCTAACCATTTTAAG+TGG | + | chr1_3:15179807-15179826 | None:intergenic | 35.0% |
| ATCAATGACTGACTAAGATG+AGG | + | chr1_3:15179997-15180016 | None:intergenic | 35.0% | |
| CACTAGGGATTATTGTATGA+AGG | + | chr1_3:15180081-15180100 | None:intergenic | 35.0% | |
| AATCCCTAGTGTGATGTATT+AGG | - | chr1_3:15180090-15180109 | Msa0106170:intron | 35.0% | |
| ATCCCTAGTGTGATGTATTA+GGG | - | chr1_3:15180091-15180110 | Msa0106170:intron | 35.0% | |
| ! | TATGAAGCACTAACACTCAT+AGG | - | chr1_3:15180142-15180161 | Msa0106170:intron | 35.0% |
| GAATGTATAACACTTGTCTG+AGG | + | chr1_3:15180244-15180263 | None:intergenic | 35.0% | |
| TTGAATCAGGCCTATATTGA+TGG | + | chr1_3:15180338-15180357 | None:intergenic | 35.0% | |
| TGTAAAACTGATCAAGCGAA+TGG | - | chr1_3:15180362-15180381 | Msa0106170:intron | 35.0% | |
| GTAAAACTGATCAAGCGAAT+GGG | - | chr1_3:15180363-15180382 | Msa0106170:intron | 35.0% | |
| !!! | AACTCGCTTTTGATTTGGAA+TGG | + | chr1_3:15180397-15180416 | None:intergenic | 35.0% |
| !! | CACAAAACTCGCTTTTGATT+TGG | + | chr1_3:15180402-15180421 | None:intergenic | 35.0% |
| AAGATCTTCCTGGATTTGAA+AGG | - | chr1_3:15180484-15180503 | Msa0106170:intron | 35.0% | |
| ATGAAGATTAAGGGAAACAC+TGG | - | chr1_3:15180527-15180546 | Msa0106170:intron | 35.0% | |
| TTTAGGCGTTTCATGATATC+TGG | - | chr1_3:15180629-15180648 | Msa0106170:intron | 35.0% | |
| ! | TCATGATATCTGGAATGAAG+GGG | - | chr1_3:15180639-15180658 | Msa0106170:intron | 35.0% |
| AGATTTGACTCAGTTCTTGA+TGG | - | chr1_3:15180673-15180692 | Msa0106170:intron | 35.0% | |
| TTATGCAATAGGCAGTAGAA+CGG | - | chr1_3:15180953-15180972 | Msa0106170:intron | 35.0% | |
| CAACAATTACCTGATGTACA+TGG | + | chr1_3:15181062-15181081 | None:intergenic | 35.0% | |
| ATCTAATCCTACAGCATACT+TGG | + | chr1_3:15181123-15181142 | None:intergenic | 35.0% | |
| !! | TTGAACATAGGTTGATTGAC+TGG | - | chr1_3:15181195-15181214 | Msa0106170:intron | 35.0% |
| !! | ATACTCGAAGTTTTGACCTA+TGG | + | chr1_3:15181486-15181505 | None:intergenic | 35.0% |
| TTCGAGTATGAAGATTAGAC+AGG | - | chr1_3:15181497-15181516 | Msa0106170:intron | 35.0% | |
| !! | AGATGGAATTGATGACCTTT+TGG | - | chr1_3:15181545-15181564 | Msa0106170:intron | 35.0% |
| TAAGAGGTTCTATCCTAAGA+TGG | + | chr1_3:15181618-15181637 | None:intergenic | 35.0% | |
| TAGAAGCTAATGAAGAGCTA+AGG | - | chr1_3:15181714-15181733 | Msa0106170:CDS | 35.0% | |
| ATTAACGAGGCGAATATCTT+TGG | - | chr1_3:15181787-15181806 | Msa0106170:CDS | 35.0% | |
| ATAAGTGCTATGGAAGAAAC+AGG | - | chr1_3:15181948-15181967 | Msa0106170:CDS | 35.0% | |
| ! | TAAAAGGCACAACAAATTGC+CGG | + | chr1_3:15181997-15182016 | None:intergenic | 35.0% |
| ! | GCCTTTTACTATTTGATTGC+CGG | - | chr1_3:15182009-15182028 | Msa0106170:CDS | 35.0% |
| TCCGGCAATCAAATAGTAAA+AGG | + | chr1_3:15182013-15182032 | None:intergenic | 35.0% | |
| AAAATTGAGTTCCTAGACTC+CGG | + | chr1_3:15182031-15182050 | None:intergenic | 35.0% | |
| ! | AAAAACACAACTAGGGCATT+TGG | - | chr1_3:15182143-15182162 | Msa0106170:exon | 35.0% |
| GGCATTTGGTTGTATGAAAA+TGG | - | chr1_3:15182157-15182176 | Msa0106170:five_prime_UTR | 35.0% | |
| AAAATGGTGAGATACGAGTT+TGG | - | chr1_3:15182173-15182192 | Msa0106170:five_prime_UTR | 35.0% | |
| CTACTATGCAAGAAGAACCA+TGG | + | chr1_3:15174153-15174172 | None:intergenic | 40.0% | |
| TTCTTATTCCACGTCACCTT+CGG | + | chr1_3:15174391-15174410 | None:intergenic | 40.0% | |
| GGAATAAGAAATACCGAGAC+CGG | - | chr1_3:15174401-15174420 | Msa0106170:three_prime_UTR | 40.0% | |
| TTAAACTTCACTCTCCCCTT+CGG | + | chr1_3:15174454-15174473 | None:intergenic | 40.0% | |
| AGTGAAGTTTAAGGAGGAAG+AGG | - | chr1_3:15174462-15174481 | Msa0106170:three_prime_UTR | 40.0% | |
| !! | AGATGTTGGTGTTGTGAAAG+AGG | - | chr1_3:15174570-15174589 | Msa0106170:CDS | 40.0% |
| GATCAGAAGTCTTTGTCTGT+TGG | - | chr1_3:15174595-15174614 | Msa0106170:CDS | 40.0% | |
| ! | ATTATTGGTGCTCCTAATGC+TGG | - | chr1_3:15174619-15174638 | Msa0106170:intron | 40.0% |
| ! | AGAGAGGATTTTCCAGCATT+AGG | + | chr1_3:15174634-15174653 | None:intergenic | 40.0% |
| CACCATGTAATTAGTGAGAG+AGG | + | chr1_3:15174650-15174669 | None:intergenic | 40.0% | |
| CTCTCACTAATTACATGGTG+AGG | - | chr1_3:15174650-15174669 | Msa0106170:intron | 40.0% | |
| TTATGTTGTAGCCTGAGATG+AGG | - | chr1_3:15174718-15174737 | Msa0106170:intron | 40.0% | |
| AGCTTATGAAAACATGAGGG+TGG | - | chr1_3:15174820-15174839 | Msa0106170:intron | 40.0% | |
| !! | GCTGTTTTCATAAGCTATGC+AGG | + | chr1_3:15174973-15174992 | None:intergenic | 40.0% |
| ! | TCGGTGTTTGTGCTAAACAT+TGG | - | chr1_3:15175142-15175161 | Msa0106170:intron | 40.0% |
| TTAACTCCCCCACCAAAAAA+TGG | - | chr1_3:15175167-15175186 | Msa0106170:intron | 40.0% | |
| GCAAAGGAAATACAATCAGG+GGG | + | chr1_3:15175230-15175249 | None:intergenic | 40.0% | |
| ! | AAGCTTCCCCACCAAATTTT+TGG | - | chr1_3:15175354-15175373 | Msa0106170:intron | 40.0% |
| ! | TCCACTCCAAAAATTTGGTG+GGG | + | chr1_3:15175363-15175382 | None:intergenic | 40.0% |
| ! | TCTAAAGTGCCCTTTAGGAA+TGG | - | chr1_3:15175492-15175511 | Msa0106170:intron | 40.0% |
| ! | CTAAAGTGCCCTTTAGGAAT+GGG | - | chr1_3:15175493-15175512 | Msa0106170:intron | 40.0% |
| TCATGGAACCCATTCCTAAA+GGG | + | chr1_3:15175504-15175523 | None:intergenic | 40.0% | |
| !! | ATTATTTAGGGAGAGTGCCT+TGG | - | chr1_3:15175619-15175638 | Msa0106170:intron | 40.0% |
| !! | TTATTTAGGGAGAGTGCCTT+GGG | - | chr1_3:15175620-15175639 | Msa0106170:intron | 40.0% |
| ACACTTGTGTATATGTCCCT+GGG | + | chr1_3:15175800-15175819 | None:intergenic | 40.0% | |
| AACACTTGTGTATATGTCCC+TGG | + | chr1_3:15175801-15175820 | None:intergenic | 40.0% | |
| CTCTTCCAAACACACCTAAA+TGG | - | chr1_3:15175842-15175861 | Msa0106170:CDS | 40.0% | |
| CTTCCAAACACACCTAAATG+GGG | - | chr1_3:15175844-15175863 | Msa0106170:CDS | 40.0% | |
| AAACCCCATTTAGGTGTGTT+TGG | + | chr1_3:15175850-15175869 | None:intergenic | 40.0% | |
| !! | TAGCAGATACCTTTGGGATT+AGG | - | chr1_3:15176152-15176171 | Msa0106170:intron | 40.0% |
| GAGACACTTGTCTAAGTTGT+TGG | + | chr1_3:15176189-15176208 | None:intergenic | 40.0% | |
| CACATATCAGACACACATAC+GGG | - | chr1_3:15176258-15176277 | Msa0106170:intron | 40.0% | |
| ACATATCAGACACACATACG+GGG | - | chr1_3:15176259-15176278 | Msa0106170:intron | 40.0% | |
| GATTTGTCTAGGAAGGGATT+TGG | - | chr1_3:15176288-15176307 | Msa0106170:intron | 40.0% | |
| TGAGATTCCTCCCTCAATAA+TGG | - | chr1_3:15176317-15176336 | Msa0106170:intron | 40.0% | |
| ! | TTCCTCCCTCAATAATGGAA+AGG | - | chr1_3:15176322-15176341 | Msa0106170:intron | 40.0% |
| ATCCTTTCCATTATTGAGGG+AGG | + | chr1_3:15176327-15176346 | None:intergenic | 40.0% | |
| TGAATAGTCCACACCTTCTT+AGG | - | chr1_3:15176420-15176439 | Msa0106170:intron | 40.0% | |
| AGTTTAGACCTAAGAAGGTG+TGG | + | chr1_3:15176431-15176450 | None:intergenic | 40.0% | |
| CCAACAGTTTAGACCTAAGA+AGG | + | chr1_3:15176436-15176455 | None:intergenic | 40.0% | |
| CCTTCTTAGGTCTAAACTGT+TGG | - | chr1_3:15176433-15176452 | Msa0106170:intron | 40.0% | |
| GGTCTAAACTGTTGGTATAG+AGG | - | chr1_3:15176441-15176460 | Msa0106170:intron | 40.0% | |
| CTGTTGGTATAGAGGTGAAA+AGG | - | chr1_3:15176449-15176468 | Msa0106170:intron | 40.0% | |
| ATAGAGGTGAAAAGGGTGAT+AGG | - | chr1_3:15176457-15176476 | Msa0106170:intron | 40.0% | |
| GCAATGAACTATCATCTGCT+TGG | - | chr1_3:15176507-15176526 | Msa0106170:intron | 40.0% | |
| ATGAACTATCATCTGCTTGG+AGG | - | chr1_3:15176510-15176529 | Msa0106170:intron | 40.0% | |
| ! | AAGTTGGTTCTTCCTCAGAA+AGG | - | chr1_3:15176596-15176615 | Msa0106170:intron | 40.0% |
| ! | AGTTGGTTCTTCCTCAGAAA+GGG | - | chr1_3:15176597-15176616 | Msa0106170:intron | 40.0% |
| ! | ATCATAGGTTGGAACAAAGG+TGG | - | chr1_3:15176855-15176874 | Msa0106170:intron | 40.0% |
| ACCACAACTCATGAAGTTGT+GGG | - | chr1_3:15176901-15176920 | Msa0106170:intron | 40.0% | |
| CACCCAAATTGTGAGTAACT+TGG | - | chr1_3:15176942-15176961 | Msa0106170:intron | 40.0% | |
| CAGCCAAGTTACTCACAATT+TGG | + | chr1_3:15176948-15176967 | None:intergenic | 40.0% | |
| GAATGCTGAGGTTACAATAG+AGG | - | chr1_3:15176996-15177015 | Msa0106170:intron | 40.0% | |
| ACCGTCGATATATGCATGAT+TGG | - | chr1_3:15177221-15177240 | Msa0106170:intron | 40.0% | |
| GCCAATCATGCATATATCGA+CGG | + | chr1_3:15177225-15177244 | None:intergenic | 40.0% | |
| ! | TGATTGGCTCCAATGAAACA+TGG | - | chr1_3:15177237-15177256 | Msa0106170:intron | 40.0% |
| GTAGGCATCCTGTTAAAATC+CGG | - | chr1_3:15177636-15177655 | Msa0106170:intron | 40.0% | |
| !! | CAGCAATACCGGATTTTAAC+AGG | + | chr1_3:15177647-15177666 | None:intergenic | 40.0% |
| ACAAAAGGCAAGAACTACAC+GGG | + | chr1_3:15177720-15177739 | None:intergenic | 40.0% | |
| GACAAAAGGCAAGAACTACA+CGG | + | chr1_3:15177721-15177740 | None:intergenic | 40.0% | |
| ! | TGCCTTTTGTCATCTGTGTT+TGG | - | chr1_3:15177730-15177749 | Msa0106170:intron | 40.0% |
| !!! | CAGTGTTTTTTTGATACGCC+AGG | - | chr1_3:15177908-15177927 | Msa0106170:intron | 40.0% |
| !! | TTGTAGCGGATTCCCTTATA+AGG | - | chr1_3:15177943-15177962 | Msa0106170:intron | 40.0% |
| ATTCCCTTATAAGGATGCCA+AGG | - | chr1_3:15177952-15177971 | Msa0106170:intron | 40.0% | |
| !! | TGTTGAAAGTGCTTGGAGTT+CGG | - | chr1_3:15177979-15177998 | Msa0106170:intron | 40.0% |
| ATGTCCATAGACATATCACC+AGG | - | chr1_3:15178035-15178054 | Msa0106170:intron | 40.0% | |
| !! | ATACTCTGATGGTGGATTCT+AGG | - | chr1_3:15178084-15178103 | Msa0106170:intron | 40.0% |
| !! | TACTCTGATGGTGGATTCTA+GGG | - | chr1_3:15178085-15178104 | Msa0106170:intron | 40.0% |
| ATCCAGTGTGGTCACAAATA+AGG | + | chr1_3:15178157-15178176 | None:intergenic | 40.0% | |
| AGATCTGAAGGCAAAATGAC+TGG | - | chr1_3:15178508-15178527 | Msa0106170:intron | 40.0% | |
| GCAAAATGACTGGAACTTGT+GGG | - | chr1_3:15178518-15178537 | Msa0106170:intron | 40.0% | |
| CAAAATGACTGGAACTTGTG+GGG | - | chr1_3:15178519-15178538 | Msa0106170:intron | 40.0% | |
| !!! | GGGGTTTATTTTGTGAACTG+AGG | - | chr1_3:15178538-15178557 | Msa0106170:intron | 40.0% |
| ! | TCCTAAAGGGTGCATATTAG+GGG | + | chr1_3:15178862-15178881 | None:intergenic | 40.0% |
| TGGTTGGACCATTTCCTAAA+GGG | + | chr1_3:15178875-15178894 | None:intergenic | 40.0% | |
| ATGGTTGGACCATTTCCTAA+AGG | + | chr1_3:15178876-15178895 | None:intergenic | 40.0% | |
| TTTAGGAAATGGTCCAACCA+TGG | - | chr1_3:15178875-15178894 | Msa0106170:intron | 40.0% | |
| GAGATAGAGGCAGCAATAAA+TGG | + | chr1_3:15178991-15179010 | None:intergenic | 40.0% | |
| TATCTCCAAGTCCAATTCCA+TGG | - | chr1_3:15179005-15179024 | Msa0106170:intron | 40.0% | |
| TGTGTTGGAGGAATGACAAA+GGG | + | chr1_3:15179038-15179057 | None:intergenic | 40.0% | |
| ! | AAAGTGGAAACAGTGCTACT+TGG | + | chr1_3:15179157-15179176 | None:intergenic | 40.0% |
| TAGATAAATCCGTCGGTGAT+CGG | - | chr1_3:15179317-15179336 | Msa0106170:intron | 40.0% | |
| !! | CTTCAATTTTTCTGGGAGGT+TGG | - | chr1_3:15179401-15179420 | Msa0106170:CDS | 40.0% |
| !! | AATAGCCGGTTAAGTTGAAG+AGG | - | chr1_3:15179622-15179641 | Msa0106170:intron | 40.0% |
| ATGGACCTCTTCAACTTAAC+CGG | + | chr1_3:15179630-15179649 | None:intergenic | 40.0% | |
| AAGTTGAAGAGGTCCATGTT+TGG | - | chr1_3:15179633-15179652 | Msa0106170:intron | 40.0% | |
| CGTCTATAACCATCTTTGCT+TGG | + | chr1_3:15179871-15179890 | None:intergenic | 40.0% | |
| GCTTAACTTATAGTTGGGCA+TGG | - | chr1_3:15180036-15180055 | Msa0106170:intron | 40.0% | |
| CACCCTAATACATCACACTA+GGG | + | chr1_3:15180096-15180115 | None:intergenic | 40.0% | |
| ACACCCTAATACATCACACT+AGG | + | chr1_3:15180097-15180116 | None:intergenic | 40.0% | |
| !! | TGATGTATTAGGGTGTCGAT+GGG | - | chr1_3:15180101-15180120 | Msa0106170:intron | 40.0% |
| GTTAGTGCTTCATACTGCTT+GGG | + | chr1_3:15180136-15180155 | None:intergenic | 40.0% | |
| TGTTAGTGCTTCATACTGCT+TGG | + | chr1_3:15180137-15180156 | None:intergenic | 40.0% | |
| GCACTAACACTCATAGGTTT+AGG | - | chr1_3:15180148-15180167 | Msa0106170:intron | 40.0% | |
| TTTGCAACATGTCGAACATG+TGG | + | chr1_3:15180179-15180198 | None:intergenic | 40.0% | |
| CTAACACGCGTTGTATAAAC+AGG | + | chr1_3:15180210-15180229 | None:intergenic | 40.0% | |
| GAAGAATTCGAAGATCTTCC+TGG | - | chr1_3:15180474-15180493 | Msa0106170:intron | 40.0% | |
| CTTCCTGGATTTGAAAGGTA+AGG | - | chr1_3:15180489-15180508 | Msa0106170:intron | 40.0% | |
| AGACCTTACCTTTCAAATCC+AGG | + | chr1_3:15180495-15180514 | None:intergenic | 40.0% | |
| ! | CATGATATCTGGAATGAAGG+GGG | - | chr1_3:15180640-15180659 | Msa0106170:intron | 40.0% |
| ! | TCAATGTTCTTTTCTGGGTG+TGG | - | chr1_3:15180772-15180791 | Msa0106170:intron | 40.0% |
| GACACTCCAAGACTTAACAT+TGG | - | chr1_3:15180916-15180935 | Msa0106170:intron | 40.0% | |
| GTAAATGGATCTTCTTCCCA+GGG | + | chr1_3:15180979-15180998 | None:intergenic | 40.0% | |
| TTTCATAACTTCCTCGGTCA+TGG | + | chr1_3:15181001-15181020 | None:intergenic | 40.0% | |
| CATTAGAAGTTGTGCGTGAA+AGG | - | chr1_3:15181028-15181047 | Msa0106170:intron | 40.0% | |
| ATTTGTGCCAAGTATGCTGT+AGG | - | chr1_3:15181113-15181132 | Msa0106170:intron | 40.0% | |
| GTCTCTTCTTTGAACTCAGA+TGG | - | chr1_3:15181528-15181547 | Msa0106170:intron | 40.0% | |
| AACATGAATAGGGGATGAGA+GGG | + | chr1_3:15181673-15181692 | None:intergenic | 40.0% | |
| AAACATGAATAGGGGATGAG+AGG | + | chr1_3:15181674-15181693 | None:intergenic | 40.0% | |
| AACATGGTGTGTGGCAAAAA+AGG | + | chr1_3:15181826-15181845 | None:intergenic | 40.0% | |
| TGCAGCATGTAAAATGCCAA+AGG | - | chr1_3:15181847-15181866 | Msa0106170:CDS | 40.0% | |
| GCAGCATGTAAAATGCCAAA+GGG | - | chr1_3:15181848-15181867 | Msa0106170:CDS | 40.0% | |
| CAGCATGTAAAATGCCAAAG+GGG | - | chr1_3:15181849-15181868 | Msa0106170:CDS | 40.0% | |
| ! | AAGAAACAGGTTGAGTTCGT+TGG | - | chr1_3:15181961-15181980 | Msa0106170:CDS | 40.0% |
| !! | TGAATGTTCGGGTTGAGGAT+CGG | + | chr1_3:15174305-15174324 | None:intergenic | 45.0% |
| AAGGTTGCGTCTGAATGTTC+GGG | + | chr1_3:15174316-15174335 | None:intergenic | 45.0% | |
| GAAGGTTGCGTCTGAATGTT+CGG | + | chr1_3:15174317-15174336 | None:intergenic | 45.0% | |
| TTCGTAGTGAGAACTGTCGA+AGG | + | chr1_3:15174335-15174354 | None:intergenic | 45.0% | |
| CAACAACGATGAAAAGCCGA+AGG | - | chr1_3:15174372-15174391 | Msa0106170:three_prime_UTR | 45.0% | |
| TAAGAAATACCGAGACCGGA+CGG | - | chr1_3:15174405-15174424 | Msa0106170:three_prime_UTR | 45.0% | |
| GAAGGGGAGAGTGAAGTTTA+AGG | - | chr1_3:15174453-15174472 | Msa0106170:three_prime_UTR | 45.0% | |
| GAAGTTTAAGGAGGAAGAGG+AGG | - | chr1_3:15174465-15174484 | Msa0106170:three_prime_UTR | 45.0% | |
| AGAGGAGGAGAGGAAAACAA+AGG | - | chr1_3:15174480-15174499 | Msa0106170:three_prime_UTR | 45.0% | |
| !! | GAAAACAAAGGCGCTTGAGA+AGG | - | chr1_3:15174492-15174511 | Msa0106170:three_prime_UTR | 45.0% |
| GGTGGAACACTATATCCACA+CGG | - | chr1_3:15174838-15174857 | Msa0106170:intron | 45.0% | |
| GTCAATACAAACAAGCCGTG+TGG | + | chr1_3:15174856-15174875 | None:intergenic | 45.0% | |
| !! | TCCCCACCAAATTTTTGGAG+TGG | - | chr1_3:15175359-15175378 | Msa0106170:intron | 45.0% |
| CTCATGGAACCCATTCCTAA+AGG | + | chr1_3:15175505-15175524 | None:intergenic | 45.0% | |
| GCTTATACGTGTCCACAAGT+TGG | + | chr1_3:15175762-15175781 | None:intergenic | 45.0% | |
| TCTAGATGAAGTTGAGGTGC+AGG | - | chr1_3:15175998-15176017 | Msa0106170:intron | 45.0% | |
| AACACACCTGAGATACTCCT+TGG | - | chr1_3:15176234-15176253 | Msa0106170:intron | 45.0% | |
| !! | ATGTGTCCAAGGAGTATCTC+AGG | + | chr1_3:15176243-15176262 | None:intergenic | 45.0% |
| GTGTGTCTGATATGTGTCCA+AGG | + | chr1_3:15176254-15176273 | None:intergenic | 45.0% | |
| CATATCAGACACACATACGG+GGG | - | chr1_3:15176260-15176279 | Msa0106170:intron | 45.0% | |
| CGGGGGTTAAAGATTTGTCT+AGG | - | chr1_3:15176277-15176296 | Msa0106170:intron | 45.0% | |
| !! | TCTCCAAGAGTGTTCTCAAG+TGG | - | chr1_3:15176362-15176381 | Msa0106170:intron | 45.0% |
| !! | CTCCAAGAGTGTTCTCAAGT+GGG | - | chr1_3:15176363-15176382 | Msa0106170:intron | 45.0% |
| !! | TCCAAGAGTGTTCTCAAGTG+GGG | - | chr1_3:15176364-15176383 | Msa0106170:intron | 45.0% |
| GGAACAAGCTCCTTACAAGA+TGG | + | chr1_3:15176645-15176664 | None:intergenic | 45.0% | |
| GAGGTTATCAAGATCGTGAG+TGG | + | chr1_3:15176713-15176732 | None:intergenic | 45.0% | |
| GATAACCTCTTCGTGATCTC+TGG | - | chr1_3:15176724-15176743 | Msa0106170:intron | 45.0% | |
| TACAACCAGAGATCACGAAG+AGG | + | chr1_3:15176732-15176751 | None:intergenic | 45.0% | |
| ! | ATAGGTTGGAACAAAGGTGG+CGG | - | chr1_3:15176858-15176877 | Msa0106170:intron | 45.0% |
| CACCACAACTCATGAAGTTG+TGG | - | chr1_3:15176900-15176919 | Msa0106170:intron | 45.0% | |
| GTGTGTAAAAGGGAATGCTG+AGG | - | chr1_3:15176984-15177003 | Msa0106170:intron | 45.0% | |
| TGCCCGTATTCTGACTAAGA+TGG | + | chr1_3:15177096-15177115 | None:intergenic | 45.0% | |
| TAACAGGATGCCTACCATAC+AGG | + | chr1_3:15177631-15177650 | None:intergenic | 45.0% | |
| ATTTGGTAGGGCAGCAATAC+CGG | + | chr1_3:15177658-15177677 | None:intergenic | 45.0% | |
| GAGCCTTGGCATCCTTATAA+GGG | + | chr1_3:15177958-15177977 | None:intergenic | 45.0% | |
| CTGAGGAAATACTCTGATGG+TGG | - | chr1_3:15178076-15178095 | Msa0106170:intron | 45.0% | |
| GAGGTGTACCACTATACCAT+TGG | - | chr1_3:15178109-15178128 | Msa0106170:intron | 45.0% | |
| ! | CTCCTTATTTGTGACCACAC+TGG | - | chr1_3:15178152-15178171 | Msa0106170:intron | 45.0% |
| GGCAAAATGACTGGAACTTG+TGG | - | chr1_3:15178517-15178536 | Msa0106170:intron | 45.0% | |
| GTGGCGAAATGAGATGTGTT+AGG | - | chr1_3:15178630-15178649 | Msa0106170:intron | 45.0% | |
| GCGAAATGAGATGTGTTAGG+TGG | - | chr1_3:15178633-15178652 | Msa0106170:intron | 45.0% | |
| ! | GTTAGGTGGAGAGAAAGTAC+TGG | - | chr1_3:15178647-15178666 | Msa0106170:intron | 45.0% |
| !! | AGTAGGTGGATTCTAAGGTG+GGG | + | chr1_3:15178784-15178803 | None:intergenic | 45.0% |
| !! | GAGTAGGTGGATTCTAAGGT+GGG | + | chr1_3:15178785-15178804 | None:intergenic | 45.0% |
| ! | AGAGTAGGTGGATTCTAAGG+TGG | + | chr1_3:15178786-15178805 | None:intergenic | 45.0% |
| ACCTTAGAATCCACCTACTC+TGG | - | chr1_3:15178785-15178804 | Msa0106170:intron | 45.0% | |
| ! | TCCAGAGTAGGTGGATTCTA+AGG | + | chr1_3:15178789-15178808 | None:intergenic | 45.0% |
| AAACACGACTGTTCCAGAGT+AGG | + | chr1_3:15178801-15178820 | None:intergenic | 45.0% | |
| ! | CCTAAAGGGTGCATATTAGG+GGG | + | chr1_3:15178861-15178880 | None:intergenic | 45.0% |
| TGAACTAAGAGGTCCATGGT+TGG | + | chr1_3:15178891-15178910 | None:intergenic | 45.0% | |
| AGGTTGAACTAAGAGGTCCA+TGG | + | chr1_3:15178895-15178914 | None:intergenic | 45.0% | |
| GGAATTGGACTTGGAGATAG+AGG | + | chr1_3:15179004-15179023 | None:intergenic | 45.0% | |
| AGTGACCATGGAATTGGACT+TGG | + | chr1_3:15179013-15179032 | None:intergenic | 45.0% | |
| GTGTTGGAGGAATGACAAAG+GGG | + | chr1_3:15179037-15179056 | None:intergenic | 45.0% | |
| GTGTGTTGGAGGAATGACAA+AGG | + | chr1_3:15179039-15179058 | None:intergenic | 45.0% | |
| !! | GGAAACAGTGCTACTTGGTA+AGG | + | chr1_3:15179152-15179171 | None:intergenic | 45.0% |
| !! | GTAATGGACGACGATGGATA+CGG | - | chr1_3:15179344-15179363 | Msa0106170:intron | 45.0% |
| ! | TAATGGACGACGATGGATAC+GGG | - | chr1_3:15179345-15179364 | Msa0106170:intron | 45.0% |
| ATGGTTATAGACGTGTTGCG+TGG | - | chr1_3:15179878-15179897 | Msa0106170:intron | 45.0% | |
| !! | GTGATGTATTAGGGTGTCGA+TGG | - | chr1_3:15180100-15180119 | Msa0106170:intron | 45.0% |
| TGATCAAGCGAATGGGAGAA+CGG | - | chr1_3:15180370-15180389 | Msa0106170:intron | 45.0% | |
| !! | CTTGGAGTGTCGAAGATAAC+AGG | + | chr1_3:15180907-15180926 | None:intergenic | 45.0% |
| GGTAAATGGATCTTCTTCCC+AGG | + | chr1_3:15180980-15180999 | None:intergenic | 45.0% | |
| AGATCCATTTACCATGACCG+AGG | - | chr1_3:15180987-15181006 | Msa0106170:intron | 45.0% | |
| ACTTCCTCGGTCATGGTAAA+TGG | + | chr1_3:15180994-15181013 | None:intergenic | 45.0% | |
| AGTTGCGAGATGGTTCTCTT+AGG | - | chr1_3:15181222-15181241 | Msa0106170:intron | 45.0% | |
| AGGCCAACTCAAGATTCTTG+TGG | - | chr1_3:15181274-15181293 | Msa0106170:intron | 45.0% | |
| GGCCAACTCAAGATTCTTGT+GGG | - | chr1_3:15181275-15181294 | Msa0106170:intron | 45.0% | |
| GCCAACTCAAGATTCTTGTG+GGG | - | chr1_3:15181276-15181295 | Msa0106170:intron | 45.0% | |
| TCCCCACAAGAATCTTGAGT+TGG | + | chr1_3:15181280-15181299 | None:intergenic | 45.0% | |
| ! | GGAAGCGTGGCTCAAAAATT+GGG | - | chr1_3:15181297-15181316 | Msa0106170:intron | 45.0% |
| ! | TGGTTGTGCCCATTTTCCAT+AGG | - | chr1_3:15181467-15181486 | Msa0106170:intron | 45.0% |
| ACATGAATAGGGGATGAGAG+GGG | + | chr1_3:15181672-15181691 | None:intergenic | 45.0% | |
| !! | GCAAGTGCATCTAGTTCTTC+AGG | - | chr1_3:15181751-15181770 | Msa0106170:CDS | 45.0% |
| ATGCTGCATAACATGGTGTG+TGG | + | chr1_3:15181835-15181854 | None:intergenic | 45.0% | |
| GTGTAATTCACACACCCCTT+TGG | + | chr1_3:15181866-15181885 | None:intergenic | 45.0% | |
| CAAAACCTTGCCTGAGAACA+GGG | - | chr1_3:15181911-15181930 | Msa0106170:CDS | 45.0% | |
| TCTATGATGACCCTGTTCTC+AGG | + | chr1_3:15181924-15181943 | None:intergenic | 45.0% | |
| CTATTTGATTGCCGGAGTCT+AGG | - | chr1_3:15182017-15182036 | Msa0106170:CDS | 45.0% | |
| !! | TAAACTAATAATAATATAAA+TGG | + | chr1_3:15176772-15176791 | None:intergenic | 5.0% |
| !!! | TTTAACTTTATTATATTAAT+CGG | + | chr1_3:15178937-15178956 | None:intergenic | 5.0% |
| !!! | GTGGTGGTGGTGGTGATTTT+GGG | + | chr1_3:15174232-15174251 | None:intergenic | 50.0% |
| ! | GAAGAAAGCGCGGAAGATTG+TGG | + | chr1_3:15174257-15174276 | None:intergenic | 50.0% |
| !! | GAATGTTCGGGTTGAGGATC+GGG | + | chr1_3:15174304-15174323 | None:intergenic | 50.0% |
| ATGAAAAGCCGAAGGTGACG+TGG | - | chr1_3:15174380-15174399 | Msa0106170:three_prime_UTR | 50.0% | |
| CGAACACCAGTTTATCCGTC+CGG | + | chr1_3:15174423-15174442 | None:intergenic | 50.0% | |
| CGGACGGATAAACTGGTGTT+CGG | - | chr1_3:15174421-15174440 | Msa0106170:three_prime_UTR | 50.0% | |
| GGGGAGAGTGAAGTTTAAGG+AGG | - | chr1_3:15174456-15174475 | Msa0106170:three_prime_UTR | 50.0% | |
| TTAAGGAGGAAGAGGAGGAG+AGG | - | chr1_3:15174470-15174489 | Msa0106170:three_prime_UTR | 50.0% | |
| TTCTTCTTCCTCCTCCTCCT+CGG | + | chr1_3:15174545-15174564 | None:intergenic | 50.0% | |
| CAACGCAACATCCTCATCTC+AGG | + | chr1_3:15174732-15174751 | None:intergenic | 50.0% | |
| TCCAAACAGAGCCGTCAACA+TGG | - | chr1_3:15175080-15175099 | Msa0106170:CDS | 50.0% | |
| TACCGGTATCGCCATGTTGA+CGG | + | chr1_3:15175094-15175113 | None:intergenic | 50.0% | |
| TCCTTTGCTTTGCTAGCCGA+TGG | - | chr1_3:15175242-15175261 | Msa0106170:intron | 50.0% | |
| ! | TCCATCGGCTAGCAAAGCAA+AGG | + | chr1_3:15175246-15175265 | None:intergenic | 50.0% |
| TCCCCACTTGAGAACACTCT+TGG | + | chr1_3:15176368-15176387 | None:intergenic | 50.0% | |
| TCTCAAGTGGGGATCCGATA+TGG | - | chr1_3:15176375-15176394 | Msa0106170:intron | 50.0% | |
| GGGGATCCGATATGGAATGA+TGG | - | chr1_3:15176383-15176402 | Msa0106170:intron | 50.0% | |
| CTATCATCTGCTTGGAGGTG+TGG | - | chr1_3:15176515-15176534 | Msa0106170:intron | 50.0% | |
| GCCCACAACTTCATGAGTTG+TGG | + | chr1_3:15176905-15176924 | None:intergenic | 50.0% | |
| !! | GTTGTGGGCGTGTTGACTAA+AGG | - | chr1_3:15176916-15176935 | Msa0106170:intron | 50.0% |
| CTACAATTTAGCACGAGCCC+TGG | + | chr1_3:15177929-15177948 | None:intergenic | 50.0% | |
| GGGCTCGTGCTAAATTGTAG+CGG | - | chr1_3:15177929-15177948 | Msa0106170:intron | 50.0% | |
| CGAGCCTTGGCATCCTTATA+AGG | + | chr1_3:15177959-15177978 | None:intergenic | 50.0% | |
| AGCACTTTCAACACGAGCCT+TGG | + | chr1_3:15177972-15177991 | None:intergenic | 50.0% | |
| !! | AGGCTCGTGTTGAAAGTGCT+TGG | - | chr1_3:15177972-15177991 | Msa0106170:intron | 50.0% |
| !! | TGATGGTGGATTCTAGGGTG+AGG | - | chr1_3:15178090-15178109 | Msa0106170:intron | 50.0% |
| TGGTAGGCGAGAGAAAGAAC+GGG | + | chr1_3:15178193-15178212 | None:intergenic | 50.0% | |
| CTGGTAGGCGAGAGAAAGAA+CGG | + | chr1_3:15178194-15178213 | None:intergenic | 50.0% | |
| GCAGCGAAATGAGATCTGGT+AGG | + | chr1_3:15178209-15178228 | None:intergenic | 50.0% | |
| GTTGTAGAACAATCGGAGCC+CGG | - | chr1_3:15178579-15178598 | Msa0106170:intron | 50.0% | |
| ACAATGACGTGCCGGAACAA+CGG | + | chr1_3:15178607-15178626 | None:intergenic | 50.0% | |
| TATAGTGTGGTACACCGGTG+AGG | - | chr1_3:15178745-15178764 | Msa0106170:intron | 50.0% | |
| ATAGTGTGGTACACCGGTGA+GGG | - | chr1_3:15178746-15178765 | Msa0106170:intron | 50.0% | |
| GGCACAATTAAACCCCTCAC+CGG | + | chr1_3:15178762-15178781 | None:intergenic | 50.0% | |
| !! | GTAGGTGGATTCTAAGGTGG+GGG | + | chr1_3:15178783-15178802 | None:intergenic | 50.0% |
| CCCCCTAATATGCACCCTTT+AGG | - | chr1_3:15178858-15178877 | Msa0106170:intron | 50.0% | |
| ! | GTGCAGCAGGTTGAACTAAG+AGG | + | chr1_3:15178902-15178921 | None:intergenic | 50.0% |
| TTAGTTCAACCTGCTGCACC+AGG | - | chr1_3:15178903-15178922 | Msa0106170:intron | 50.0% | |
| GTTACATTACCTGGTGCAGC+AGG | + | chr1_3:15178915-15178934 | None:intergenic | 50.0% | |
| AGGGGTAGTGACCATGGAAT+TGG | + | chr1_3:15179019-15179038 | None:intergenic | 50.0% | |
| TGACAAAGGGGTAGTGACCA+TGG | + | chr1_3:15179025-15179044 | None:intergenic | 50.0% | |
| AAATCCGTCGGTGATCGGAA+CGG | - | chr1_3:15179322-15179341 | Msa0106170:intron | 50.0% | |
| ATTACCGTTCCGATCACCGA+CGG | + | chr1_3:15179329-15179348 | None:intergenic | 50.0% | |
| ! | ATATCTGGAATGAAGGGGGC+TGG | - | chr1_3:15180644-15180663 | Msa0106170:intron | 50.0% |
| GACTCAGTTCTTGATGGAGC+AGG | - | chr1_3:15180679-15180698 | Msa0106170:intron | 50.0% | |
| AGTTGTGCGTGAAAGGTTGC+TGG | - | chr1_3:15181035-15181054 | Msa0106170:intron | 50.0% | |
| GTTGCTGGACCATGTACATC+AGG | - | chr1_3:15181050-15181069 | Msa0106170:intron | 50.0% | |
| GACTGGAAAGAGTTGCGAGA+TGG | - | chr1_3:15181212-15181231 | Msa0106170:intron | 50.0% | |
| AAGATTCTTGTGGGGAAGCG+TGG | - | chr1_3:15181284-15181303 | Msa0106170:intron | 50.0% | |
| ! | GGGAAGCGTGGCTCAAAAAT+TGG | - | chr1_3:15181296-15181315 | Msa0106170:intron | 50.0% |
| ! | CCTGTTCTCAGGCAAGGTTT+TGG | + | chr1_3:15181913-15181932 | None:intergenic | 50.0% |
| CCAAAACCTTGCCTGAGAAC+AGG | - | chr1_3:15181910-15181929 | Msa0106170:CDS | 50.0% | |
| !!! | GGTGGTGGTGGTGGTGATTT+TGG | + | chr1_3:15174233-15174252 | None:intergenic | 55.0% |
| !! | GAAGATTGTGGTGGTGGTGG+TGG | + | chr1_3:15174245-15174264 | None:intergenic | 55.0% |
| ! | GAAAGCGCGGAAGATTGTGG+TGG | + | chr1_3:15174254-15174273 | None:intergenic | 55.0% |
| !! | GCGTCTGAATGTTCGGGTTG+AGG | + | chr1_3:15174310-15174329 | None:intergenic | 55.0% |
| CCAGTTTATCCGTCCGGTCT+CGG | + | chr1_3:15174417-15174436 | None:intergenic | 55.0% | |
| ! | GGCGCTTGAGAAGGCTTTGT+TGG | - | chr1_3:15174501-15174520 | Msa0106170:three_prime_UTR | 55.0% |
| AGCTGCGTTGAGTAAACCCG+AGG | - | chr1_3:15174525-15174544 | Msa0106170:exon | 55.0% | |
| TGCGTTGAGTAAACCCGAGG+AGG | - | chr1_3:15174528-15174547 | Msa0106170:exon | 55.0% | |
| GTTGAGTAAACCCGAGGAGG+AGG | - | chr1_3:15174531-15174550 | Msa0106170:exon | 55.0% | |
| TCTTCTTCCTCCTCCTCCTC+GGG | + | chr1_3:15174544-15174563 | None:intergenic | 55.0% | |
| GCCATGTTGACGGCTCTGTT+TGG | + | chr1_3:15175084-15175103 | None:intergenic | 55.0% | |
| AGCCGTCAACATGGCGATAC+CGG | - | chr1_3:15175089-15175108 | Msa0106170:CDS | 55.0% | |
| GCAAGAACTACACGGGAGCA+GGG | + | chr1_3:15177713-15177732 | None:intergenic | 55.0% | |
| GTGGGCAGCGAAATGAGATC+TGG | + | chr1_3:15178213-15178232 | None:intergenic | 55.0% | |
| TAGTGTGGTACACCGGTGAG+GGG | - | chr1_3:15178747-15178766 | Msa0106170:intron | 55.0% | |
| CACGACTGTTCCAGAGTAGG+TGG | + | chr1_3:15178798-15178817 | None:intergenic | 55.0% | |
| GTCGGTGATCGGAACGGTAA+TGG | - | chr1_3:15179328-15179347 | Msa0106170:intron | 55.0% | |
| !! | GGAACGGTAATGGACGACGA+TGG | - | chr1_3:15179338-15179357 | Msa0106170:intron | 55.0% |
| AATAGGCAGTAGAACGGCCC+TGG | - | chr1_3:15180959-15180978 | Msa0106170:intron | 55.0% | |
| ATAGGCAGTAGAACGGCCCT+GGG | - | chr1_3:15180960-15180979 | Msa0106170:intron | 55.0% | |
| GAATAGGGGATGAGAGGGGA+AGG | + | chr1_3:15181668-15181687 | None:intergenic | 55.0% | |
| GATGACCCTGTTCTCAGGCA+AGG | + | chr1_3:15181919-15181938 | None:intergenic | 55.0% | |
| !! | GTTCGTTGGTGATCTCACGC+CGG | - | chr1_3:15181975-15181994 | Msa0106170:CDS | 55.0% |
| !! | GATTGTGGTGGTGGTGGTGG+TGG | + | chr1_3:15174242-15174261 | None:intergenic | 60.0% |
| !! | GCGGAAGATTGTGGTGGTGG+TGG | + | chr1_3:15174248-15174267 | None:intergenic | 60.0% |
| AGCGCGGAAGATTGTGGTGG+TGG | + | chr1_3:15174251-15174270 | None:intergenic | 60.0% | |
| GTTCGGCGGAGAAGAAAGCG+CGG | + | chr1_3:15174267-15174286 | None:intergenic | 60.0% | |
| AGGATCGGGTTCCGGTGTGA+GGG | + | chr1_3:15174290-15174309 | None:intergenic | 60.0% | |
| !! | TCGGGTTGAGGATCGGGTTC+CGG | + | chr1_3:15174298-15174317 | None:intergenic | 60.0% |
| CCGAGACCGGACGGATAAAC+TGG | - | chr1_3:15174414-15174433 | Msa0106170:three_prime_UTR | 60.0% | |
| GTGTTCGGCGATGAGCCGAA+GGG | - | chr1_3:15174436-15174455 | Msa0106170:three_prime_UTR | 60.0% | |
| TGTTCGGCGATGAGCCGAAG+GGG | - | chr1_3:15174437-15174456 | Msa0106170:three_prime_UTR | 60.0% | |
| GAGTAAACCCGAGGAGGAGG+AGG | - | chr1_3:15174534-15174553 | Msa0106170:exon | 60.0% | |
| GCTTTGCTAGCCGATGGAGC+TGG | - | chr1_3:15175248-15175267 | Msa0106170:intron | 60.0% | |
| ! | GAAGAGCGTGCCAGCTCCAT+CGG | + | chr1_3:15175261-15175280 | None:intergenic | 60.0% |
| AGCTGGCACGCTCTTCCAAC+AGG | - | chr1_3:15175265-15175284 | Msa0106170:CDS | 60.0% | |
| GGCAAGAACTACACGGGAGC+AGG | + | chr1_3:15177714-15177733 | None:intergenic | 60.0% | |
| TCCGGCACGTCATTGTGCTG+TGG | - | chr1_3:15178611-15178630 | Msa0106170:intron | 60.0% | |
| GCCACAGCACAATGACGTGC+CGG | + | chr1_3:15178615-15178634 | None:intergenic | 60.0% | |
| TTCCGGTGTGAGGGGTTCGG+CGG | + | chr1_3:15174281-15174300 | None:intergenic | 65.0% | |
| GGGTTCCGGTGTGAGGGGTT+CGG | + | chr1_3:15174284-15174303 | None:intergenic | 65.0% | |
| GGATCGGGTTCCGGTGTGAG+GGG | + | chr1_3:15174289-15174308 | None:intergenic | 65.0% | |
| GAGGATCGGGTTCCGGTGTG+AGG | + | chr1_3:15174291-15174310 | None:intergenic | 65.0% | |
| GGTGTTCGGCGATGAGCCGA+AGG | - | chr1_3:15174435-15174454 | Msa0106170:three_prime_UTR | 65.0% | |
| ACGTGCCGGAACAACGGCTC+CGG | + | chr1_3:15178601-15178620 | None:intergenic | 65.0% | |
| CTCCGCCGAACCCCTCACAC+CGG | - | chr1_3:15174276-15174295 | Msa0106170:three_prime_UTR | 70.0% | |
| GGAGCCCGGAGCCGTTGTTC+CGG | - | chr1_3:15178593-15178612 | Msa0106170:intron | 70.0% | |
| CGTGCCGGAACAACGGCTCC+GGG | + | chr1_3:15178600-15178619 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 15174098 | 15182233 | 15174098 | ID=Msa0106170;Name=Msa0106170 |
| chr1_3 | mRNA | 15174098 | 15182233 | 15174098 | ID=Msa0106170-mRNA-1;Parent=Msa0106170;Name=Msa0106170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=86|0.85|0.87|1|1|1|8|446|427 |
| chr1_3 | exon | 15174098 | 15174628 | 15174098 | ID=Msa0106170-mRNA-1:exon:5877;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15175013 | 15175152 | 15175013 | ID=Msa0106170-mRNA-1:exon:5876;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15175260 | 15175367 | 15175260 | ID=Msa0106170-mRNA-1:exon:5875;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15175625 | 15175697 | 15175625 | ID=Msa0106170-mRNA-1:exon:5874;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15175826 | 15175984 | 15175826 | ID=Msa0106170-mRNA-1:exon:5873;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15178275 | 15178420 | 15178275 | ID=Msa0106170-mRNA-1:exon:5872;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15179380 | 15179469 | 15179380 | ID=Msa0106170-mRNA-1:exon:5871;Parent=Msa0106170-mRNA-1 |
| chr1_3 | exon | 15181665 | 15182233 | 15181665 | ID=Msa0106170-mRNA-1:exon:5870;Parent=Msa0106170-mRNA-1 |
| chr1_3 | five_prime_UTR | 15182148 | 15182233 | 15182148 | ID=Msa0106170-mRNA-1:five_prime_utr;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15181665 | 15182147 | 15181665 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15179380 | 15179469 | 15179380 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15178275 | 15178420 | 15178275 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15175826 | 15175984 | 15175826 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15175625 | 15175697 | 15175625 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15175260 | 15175367 | 15175260 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15175013 | 15175152 | 15175013 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | CDS | 15174544 | 15174628 | 15174544 | ID=Msa0106170-mRNA-1:cds;Parent=Msa0106170-mRNA-1 |
| chr1_3 | three_prime_UTR | 15174098 | 15174543 | 15174098 | ID=Msa0106170-mRNA-1:three_prime_utr;Parent=Msa0106170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
