AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0106740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106740 MtrunA17_Chr1g0162871 97.313 1005 25 1 1 1005 1 1003 0.0 2028
Msa0106740 MtrunA17_Chr7g0270541 33.779 598 355 13 436 1004 415 1000 3.29e-93 318
Msa0106740 MtrunA17_Chr7g0270541 62.698 126 44 1 76 198 112 237 1.58e-40 162
Msa0106740 MtrunA17_Chr1g0194121 33.274 565 343 11 466 1004 446 1002 1.28e-87 303
Msa0106740 MtrunA17_Chr1g0194121 63.866 119 38 3 76 191 115 231 2.89e-36 148
Msa0106740 MtrunA17_Chr2g0302791 31.795 585 334 18 466 1005 461 1025 1.89e-82 288
Msa0106740 MtrunA17_Chr2g0302791 54.930 142 58 1 76 211 103 244 1.35e-41 166
Msa0106740 MtrunA17_Chr8g0360361 66.667 87 29 0 104 190 63 149 2.23e-32 124
Msa0106740 MtrunA17_Chr8g0386271 67.901 81 26 0 106 186 99 179 2.73e-32 130
Msa0106740 MtrunA17_Chr2g0282521 65.909 88 29 1 94 180 51 138 9.47e-32 121
Msa0106740 MtrunA17_Chr8g0334671 67.442 86 28 0 96 181 177 262 1.04e-31 127
Msa0106740 MtrunA17_Chr4g0046991 68.750 80 25 0 104 183 71 150 2.24e-31 120
Msa0106740 MtrunA17_Chr2g0308321 64.835 91 31 1 91 181 157 246 7.58e-31 128
Msa0106740 MtrunA17_Chr5g0420051 63.441 93 33 1 91 183 167 258 3.17e-30 125
Msa0106740 MtrunA17_Chr3g0132091 42.138 159 86 2 84 236 51 209 3.54e-30 123
Msa0106740 MtrunA17_Chr7g0224821 41.026 156 70 4 45 182 2 153 4.50e-29 120
Msa0106740 MtrunA17_Chr7g0258471 59.783 92 37 0 94 185 130 221 5.32e-29 120
Msa0106740 MtrunA17_Chr7g0231911 66.667 81 27 0 106 186 149 229 7.21e-29 118
Msa0106740 MtrunA17_Chr4g0061651 59.596 99 36 1 91 189 112 206 1.24e-28 120
Msa0106740 MtrunA17_Chr3g0122411 58.621 87 36 0 104 190 163 249 6.80e-28 118
Msa0106740 MtrunA17_Chr2g0286661 30.000 250 160 4 451 693 272 513 8.28e-25 111
Msa0106740 MtrunA17_Chr2g0286661 48.936 94 47 1 106 199 103 195 4.77e-21 99.4
Msa0106740 MtrunA17_Chr8g0377421 42.857 112 64 0 68 179 94 205 1.14e-22 99.8
Msa0106740 MtrunA17_Chr8g0377401 44.643 112 56 1 73 178 123 234 7.68e-22 96.3
Msa0106740 MtrunA17_Chr2g0317041 62.745 51 19 0 102 152 95 145 6.42e-16 76.3
Msa0106740 MtrunA17_Chr8g0377431 49.153 59 30 0 103 161 148 206 5.59e-13 69.3
Msa0106740 MtrunA17_Chr1g0175031 59.184 49 20 0 104 152 72 120 4.24e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106740 AT1G20980.1 48.966 1064 433 26 16 1005 8 1035 0.0 877
Msa0106740 AT1G76580.1 47.152 1071 441 27 3 1005 7 1020 0.0 847
Msa0106740 AT1G76580.2 45.405 729 289 22 3 664 7 693 1.03e-172 521
Msa0106740 AT1G76580.3 45.392 727 288 22 3 662 7 691 7.99e-172 519
Msa0106740 AT2G47070.2 33.574 554 320 13 468 1004 229 751 1.99e-86 295
Msa0106740 AT2G47070.2 58.025 81 32 1 131 211 2 80 2.18e-20 97.8
Msa0106740 AT3G60030.1 35.536 560 308 17 467 1004 398 926 3.40e-86 298
Msa0106740 AT3G60030.1 56.618 136 57 2 77 211 97 231 3.67e-38 155
Msa0106740 AT2G47070.1 33.514 555 321 13 467 1004 357 880 2.01e-85 295
Msa0106740 AT2G47070.1 42.157 204 81 5 36 211 15 209 1.32e-36 149
Msa0106740 AT1G53160.3 63.333 90 33 0 101 190 49 138 2.32e-31 121
Msa0106740 AT1G53160.2 63.333 90 33 0 101 190 49 138 2.85e-31 121
Msa0106740 AT1G53160.1 63.333 90 33 0 101 190 49 138 2.85e-31 121
Msa0106740 AT2G33810.1 63.636 88 31 1 96 183 45 131 5.06e-31 119
Msa0106740 AT3G15270.1 58.163 98 41 0 91 188 48 145 7.05e-31 120
Msa0106740 AT1G69170.1 61.856 97 36 1 83 179 102 197 9.57e-31 126
Msa0106740 AT5G50570.1 61.446 83 32 0 104 186 99 181 2.18e-30 124
Msa0106740 AT5G50570.2 61.446 83 32 0 104 186 99 181 2.18e-30 124
Msa0106740 AT5G50670.1 61.446 83 32 0 104 186 99 181 2.18e-30 124
Msa0106740 AT5G50670.2 61.446 83 32 0 104 186 99 181 2.18e-30 124
Msa0106740 AT1G02065.1 52.756 127 48 2 73 187 143 269 2.41e-30 123
Msa0106740 AT5G18830.1 30.837 227 153 2 471 693 320 546 5.25e-28 122
Msa0106740 AT5G18830.1 46.465 99 49 1 91 189 127 221 6.28e-21 99.4
Msa0106740 AT5G18830.2 30.837 227 153 2 471 693 320 546 5.27e-28 122
Msa0106740 AT5G18830.2 46.465 99 49 1 91 189 127 221 5.84e-21 99.4
Msa0106740 AT5G18830.3 30.837 227 153 2 471 693 320 546 5.60e-28 122
Msa0106740 AT5G18830.3 46.465 99 49 1 91 189 127 221 6.43e-21 99.4
Msa0106740 AT2G42200.1 56.436 101 43 1 88 187 55 155 5.93e-28 117
Msa0106740 AT1G27370.6 56.842 95 34 1 100 194 170 257 1.06e-27 116
Msa0106740 AT5G43270.3 50.000 120 53 2 98 217 161 273 1.71e-27 117
Msa0106740 AT5G43270.1 50.000 120 53 2 98 217 161 273 1.71e-27 117
Msa0106740 AT5G43270.2 50.000 120 53 2 98 217 161 273 1.71e-27 117
Msa0106740 AT1G27370.1 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT1G27370.5 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT1G27370.3 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT1G27370.2 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT1G27370.4 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT1G27370.7 56.842 95 34 1 100 194 170 257 2.20e-27 116
Msa0106740 AT3G57920.1 57.426 101 38 2 82 182 40 135 7.70e-27 113
Msa0106740 AT1G27360.2 64.103 78 28 0 104 181 173 250 2.39e-26 113
Msa0106740 AT1G27360.1 64.103 78 28 0 104 181 173 250 2.39e-26 113
Msa0106740 AT1G27360.3 64.103 78 28 0 104 181 173 250 2.39e-26 113
Msa0106740 AT1G27360.4 64.103 78 28 0 104 181 173 250 2.39e-26 113
Msa0106740 AT1G02065.2 47.059 102 40 3 73 160 143 244 4.20e-17 82.4

Find 291 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGCATGAACATAATTT+TGG 0.128013 1_3:+16380070 Msa0106740:CDS
GAACATATTAGAGGTTAATT+TGG 0.170190 1_3:+16381739 Msa0106740:three_prime_UTR
ATCCCTCTTGATCTCTTTAA+AGG 0.178781 1_3:+16378412 Msa0106740:CDS
GTTGATGCAGTCAAATAATT+TGG 0.183156 1_3:+16381996 Msa0106740:three_prime_UTR
GAATCAGGTTGCTGCTAATT+TGG 0.209506 1_3:+16376806 Msa0106740:CDS
ATAACTCAGATTCTGATTTC+TGG 0.211467 1_3:+16379130 Msa0106740:CDS
CTGTCCCAATTCCATTCTTT+AGG 0.213368 1_3:-16376369 None:intergenic
ACCTGTGTTCGCAGCGTTCC+TGG 0.222112 1_3:-16378744 None:intergenic
TTCACATCCAAAACGATAAT+TGG 0.245892 1_3:+16376343 Msa0106740:CDS
GGAAGATTTCTTGTTTATTC+TGG 0.246345 1_3:+16379159 Msa0106740:CDS
TGTACAAGCTGTTCTTTATC+TGG 0.254859 1_3:-16377821 None:intergenic
CGGTGGAAATACATATTTCT+TGG 0.254936 1_3:-16380428 None:intergenic
AAAGCTTCTAAGGCTTTGTT+AGG 0.256564 1_3:+16376624 Msa0106740:CDS
TGTCCCAATTCCATTCTTTA+GGG 0.268922 1_3:-16376368 None:intergenic
TATTTGAGGATATTGATAAT+AGG 0.270325 1_3:+16382119 Msa0106740:three_prime_UTR
CCTGTTGTGGAGATGAATTT+TGG 0.281003 1_3:+16378289 Msa0106740:CDS
TTGTCTATCGGAACGTTTAC+GGG 0.284257 1_3:-16381312 None:intergenic
AGGATAAGTTACACCTGAAT+TGG 0.296441 1_3:+16381842 Msa0106740:three_prime_UTR
TAGGGTTCCAATTATCGTTT+TGG 0.300009 1_3:-16376350 None:intergenic
AAAATTTCAACACCCAATTC+AGG 0.301987 1_3:-16381855 None:intergenic
GATGCATAACCAGCTTTAAA+TGG 0.312390 1_3:-16378484 None:intergenic
AGGTTCGCCGCCGTTGAATC+AGG 0.312918 1_3:+16376791 Msa0106740:CDS
AGGTGGGAAAACTTGAATTA+TGG 0.313613 1_3:+16381608 Msa0106740:CDS
TTTGTCTATCGGAACGTTTA+CGG 0.314407 1_3:-16381313 None:intergenic
TAGGCTCAGTTTCTCCCTTC+AGG 0.321487 1_3:+16381588 Msa0106740:CDS
AATACATCTCCTAGTGTTCT+AGG 0.322030 1_3:+16379767 Msa0106740:CDS
GTTTGTGAACAGGTTGAAAA+TGG 0.322272 1_3:+16379935 Msa0106740:intron
GGAACCCTAAAGAATGGAAT+TGG 0.322561 1_3:+16376364 Msa0106740:CDS
GAACATGTCCTCACAATATA+AGG 0.324494 1_3:+16381914 Msa0106740:three_prime_UTR
TTCAATGTCTTCTGCTGCTT+GGG 0.324534 1_3:+16378975 Msa0106740:CDS
CATGTTGGTCAAAACCCTTC+TGG 0.329211 1_3:+16380246 Msa0106740:CDS
AGCTAGCATCGAATGAATAA+AGG 0.329929 1_3:-16381513 None:intergenic
CTGAGTATCTGAATTCAAAC+TGG 0.331636 1_3:-16378530 None:intergenic
CCATCAACACCTGCTCAAAA+TGG 0.333813 1_3:+16378034 Msa0106740:CDS
GACATGTAAGGCTGGCTATA+AGG 0.337708 1_3:-16376184 None:intergenic
ATTTGGAGGCCATGCAAATA+AGG 0.340733 1_3:+16378360 Msa0106740:CDS
ATTTGAGGATATTGATAATA+GGG 0.344391 1_3:+16382120 Msa0106740:three_prime_UTR
TAAAGCTGGTTATGCATCTT+CGG 0.346795 1_3:+16378489 Msa0106740:CDS
AAAGCTGGTTATGCATCTTC+GGG 0.352663 1_3:+16378490 Msa0106740:CDS
AGGGTATGAGACTAAGAATA+AGG 0.358431 1_3:-16376159 None:intergenic
AACTTCTGCAATTGCACACT+TGG 0.359955 1_3:-16381444 None:intergenic
CTTCAATGTCTTCTGCTGCT+TGG 0.362113 1_3:+16378974 Msa0106740:CDS
TATACATCATCAGAAGTTAT+AGG 0.371060 1_3:+16379686 Msa0106740:CDS
GATTCTGATTTCTGGAGAAA+TGG 0.374701 1_3:+16379138 Msa0106740:CDS
CACTTTGTAATCATATAGTA+TGG 0.374848 1_3:-16382148 None:intergenic
AGCTCATAGTAAAGCTTCTA+AGG 0.376735 1_3:+16376614 Msa0106740:CDS
CAAGAAAATCCTTAGTTAAC+GGG 0.380419 1_3:-16377994 None:intergenic
TGCAATTGCACACTTGGAAC+AGG 0.381293 1_3:-16381438 None:intergenic
TCCTTAGTTAACGGGGCAGG+GGG 0.382520 1_3:-16377986 None:intergenic
CAAAACCCTTCTGGATATAC+TGG 0.382889 1_3:+16380255 Msa0106740:CDS
GGTCTGCAAGGTGGTATTAG+AGG 0.383774 1_3:+16378310 Msa0106740:CDS
CGGTATTACTCCCTTGCATT+TGG 0.384111 1_3:+16380468 Msa0106740:CDS
TGTAGATTGGGTTGAAGTGC+TGG 0.386202 1_3:+16381207 Msa0106740:intron
AGGAGGGTGAAGTTTGCATT+TGG 0.388943 1_3:-16377931 None:intergenic
TGAACCGGAAAATCTTCTTT+TGG 0.396112 1_3:-16381471 None:intergenic
GAAGGAGAAGGGTTGTCAAC+AGG 0.403420 1_3:+16380292 Msa0106740:CDS
TCCCTCTTGATCTCTTTAAA+GGG 0.403698 1_3:+16378413 Msa0106740:CDS
TGGCAATCTGAATCATCATT+TGG 0.407162 1_3:-16378121 None:intergenic
GGCTAGTTTCCTTATTTGCA+TGG 0.408999 1_3:-16378369 None:intergenic
ATCCTTAGTTAACGGGGCAG+GGG 0.412793 1_3:-16377987 None:intergenic
TTGTGAGGACATGTTCTATC+TGG 0.415552 1_3:-16381907 None:intergenic
CTTAGTTAACGGGGCAGGGG+GGG 0.416027 1_3:-16377984 None:intergenic
GGAGACTTCTATTTCATTGA+AGG 0.416715 1_3:+16379525 Msa0106740:CDS
CCAAAATTCATCTCCACAAC+AGG 0.417568 1_3:-16378289 None:intergenic
CTGCTCAAAATGGCGGCAAC+GGG 0.422761 1_3:+16378044 Msa0106740:CDS
CGCGAAGATGGCAATTTCGA+TGG 0.423095 1_3:-16378205 None:intergenic
GAAACCCTTGTGGATGAAAA+CGG 0.423968 1_3:+16381230 Msa0106740:CDS
CAGTAAGATCAGCGGGTAAA+GGG 0.424392 1_3:-16377859 None:intergenic
GGATTATCATCGACGTCATA+AGG 0.425815 1_3:+16376584 Msa0106740:CDS
GTTTGAGGAGAGAGGAGCTA+TGG 0.427610 1_3:-16376068 None:intergenic
ATTTAAGTTTAGAGATTCTT+CGG 0.427631 1_3:-16376445 None:intergenic
GAATCTCTAAACTTAAATCT+TGG 0.427805 1_3:+16376450 Msa0106740:CDS
ATTAGCTCAATTCCCGGTGA+TGG 0.428300 1_3:-16381377 None:intergenic
GTTGATATCAGTGTCTCCTT+TGG 0.429670 1_3:+16379486 Msa0106740:CDS
TTAACCAAGTCAAACGAGTT+GGG 0.434205 1_3:+16381411 Msa0106740:CDS
ATTAGAGGTCTCAATTCTAA+TGG 0.436493 1_3:+16378325 Msa0106740:CDS
CTCCTTGCAAATGGATGCAT+TGG 0.437114 1_3:-16379990 None:intergenic
CAAAGCCTCATCCCTTGACT+TGG 0.437901 1_3:-16380098 None:intergenic
TTCGCAGCGTTCCTGGGAAA+TGG 0.438881 1_3:-16378737 None:intergenic
TGATCTTACTGCAAAATTGC+TGG 0.439137 1_3:+16377871 Msa0106740:CDS
CGGTCTCAACTCCTTGCAAA+TGG 0.440421 1_3:-16379999 None:intergenic
GTGTCTCCTTTGGCAATTGT+CGG 0.441124 1_3:+16379496 Msa0106740:CDS
ATGTTCATGCTCCTCTGAAA+TGG 0.441547 1_3:-16380062 None:intergenic
GCAAACAAACGAATCCGTTC+AGG 0.441823 1_3:+16376492 Msa0106740:CDS
AAATCCTTAGTTAACGGGGC+AGG 0.442282 1_3:-16377989 None:intergenic
CCGGATGAAGTGGCGGTTGG+AGG 0.443148 1_3:+16376771 Msa0106740:CDS
TCACTGCTCTATTTAGAAGT+TGG 0.443446 1_3:-16380339 None:intergenic
GTGAAGCCAGCTCCGTGAAC+CGG 0.444837 1_3:-16381486 None:intergenic
TTCCAGATTATTCGCTCGAC+AGG 0.447389 1_3:+16380182 Msa0106740:CDS
CCACCGAATCTTGAGGGCCC+TGG 0.449842 1_3:+16380445 Msa0106740:CDS
TTGATCATCGCGATGATGAT+AGG 0.450695 1_3:-16377951 None:intergenic
CCTCCAACCGCCACTTCATC+CGG 0.453273 1_3:-16376771 None:intergenic
GGAGAAACTGAGCCTACATA+AGG 0.457144 1_3:-16381581 None:intergenic
GTAAGGCTGGCTATAAGGTA+AGG 0.457764 1_3:-16376179 None:intergenic
TCATCAGAAGTTATAGGATC+AGG 0.457883 1_3:+16379692 Msa0106740:CDS
GCAGTAAGATCAGCGGGTAA+AGG 0.460954 1_3:-16377860 None:intergenic
CCTGTGTTCGCAGCGTTCCT+GGG 0.462026 1_3:-16378743 None:intergenic
GGAGACTTGCTGGTCATAAT+CGG 0.463432 1_3:+16376730 Msa0106740:CDS
GGTTCACGGAGCTGGCTTCA+CGG 0.463735 1_3:+16381488 Msa0106740:CDS
AATCCTTAGTTAACGGGGCA+GGG 0.464494 1_3:-16377988 None:intergenic
TTTGGCAATTGTCGGTGGAC+AGG 0.466662 1_3:+16379504 Msa0106740:CDS
TTCAGATCTAAAGTAACATA+AGG 0.467081 1_3:-16376017 None:intergenic
ACAGGTTGAAAATGGTTTCA+AGG 0.467248 1_3:+16379943 Msa0106740:intron
AGTTGTAGACGGAGACTTGC+TGG 0.469042 1_3:+16376720 Msa0106740:CDS
GTTACTGTAAAGTTTATTTG+AGG 0.470689 1_3:+16382105 Msa0106740:three_prime_UTR
GCAAGAAAATCCTTAGTTAA+CGG 0.472350 1_3:-16377995 None:intergenic
GATGCATTGGCTATTATCAC+TGG 0.472801 1_3:-16379977 None:intergenic
AGCTTGGTTGGCTGTTTCAA+AGG 0.474571 1_3:+16380134 Msa0106740:CDS
TTTGAGGAGAGAGGAGCTAT+GGG 0.474977 1_3:-16376067 None:intergenic
CCGCCAGGGCCCTCAAGATT+CGG 0.474979 1_3:-16380448 None:intergenic
CAGTTTCTCTTTATTCCCAA+TGG 0.477654 1_3:-16381961 None:intergenic
GGATAAGTTACACCTGAATT+GGG 0.478434 1_3:+16381843 Msa0106740:three_prime_UTR
AGAGTGATTATTTCTCATCA+TGG 0.481408 1_3:-16381273 None:intergenic
ACATTGAAGCATAAATTGAT+AGG 0.482024 1_3:-16378960 None:intergenic
AACTTCACTTCTTTGTCTAT+CGG 0.482737 1_3:-16381324 None:intergenic
TAATCACTCTTATAATATGT+TGG 0.482765 1_3:+16381286 Msa0106740:CDS
GGTTTGGTGTTTGAGGAGAG+AGG 0.483762 1_3:-16376076 None:intergenic
GAGAAACTGAGCCTACATAA+GGG 0.484362 1_3:-16381580 None:intergenic
TAGGAAAATTTGAGGAAAGA+AGG 0.485472 1_3:+16377789 Msa0106740:intron
ATAATTGGAACCCTAAAGAA+TGG 0.487578 1_3:+16376358 Msa0106740:CDS
GCTAGCATCGAATGAATAAA+GGG 0.487739 1_3:-16381512 None:intergenic
CAAAGTGTACCATTTAAAGC+TGG 0.488893 1_3:+16378475 Msa0106740:CDS
CAGGTTGAAAATGGTTTCAA+GGG 0.489945 1_3:+16379944 Msa0106740:intron
GGAGGATGAAGAGGAAGAAG+AGG 0.490372 1_3:-16376246 None:intergenic
CCTGCTCAAAATGGCGGCAA+CGG 0.490644 1_3:+16378043 Msa0106740:CDS
GTCTTCATCTCCTCCTGTTG+TGG 0.490783 1_3:+16378276 Msa0106740:CDS
GGAATAAAGAGAAACTGAGT+TGG 0.491956 1_3:+16381967 Msa0106740:three_prime_UTR
GCTATTGCTGATGGTTCTCA+AGG 0.494096 1_3:+16376849 Msa0106740:CDS
TAGTAGTACAACTATGACTT+TGG 0.494147 1_3:-16378390 None:intergenic
AAATGATGATTCAGATTGCC+AGG 0.494257 1_3:+16378123 Msa0106740:CDS
AACCTGTCGAGCGAATAATC+TGG 0.495792 1_3:-16380184 None:intergenic
GTTAATTTGGAGCTATAACT+TGG 0.496020 1_3:+16381752 Msa0106740:three_prime_UTR
GTATTCCTACAGGATCGTAC+TGG 0.496322 1_3:+16378678 Msa0106740:intron
CAGTTTGAATTCAGATACTC+AGG 0.496563 1_3:+16378531 Msa0106740:CDS
TTGTTGACTGCTATTGCTGA+TGG 0.498169 1_3:+16376840 Msa0106740:CDS
TGCAAGGGAGTAATACCGCC+AGG 0.498402 1_3:-16380463 None:intergenic
GGGTATGAGACTAAGAATAA+GGG 0.498497 1_3:-16376158 None:intergenic
AACTTAAATCTTGGAAGCAC+GGG 0.499006 1_3:+16376459 Msa0106740:CDS
ATCAGTACTAACTTTGTGCC+AGG 0.499084 1_3:-16379565 None:intergenic
GAACCCTAAAGAATGGAATT+GGG 0.499304 1_3:+16376365 Msa0106740:CDS
TGGAGTTTGATGAAGGAAAA+CGG 0.499920 1_3:+16376697 Msa0106740:CDS
CCTTAGTTAACGGGGCAGGG+GGG 0.499978 1_3:-16377985 None:intergenic
GTTATAGGATCAGGAGATCC+TGG 0.500739 1_3:+16379701 Msa0106740:CDS
GTATTTCCACCGAATCTTGA+GGG 0.500756 1_3:+16380439 Msa0106740:CDS
GATAAACACTTCGAAGGAGA+AGG 0.501550 1_3:+16380280 Msa0106740:CDS
GGAAGAAACCTCTCTGCTCC+TGG 0.503311 1_3:+16379547 Msa0106740:CDS
TTTGAGGATATTGATAATAG+GGG 0.503790 1_3:+16382121 Msa0106740:three_prime_UTR
TGCATATTTCGCTGTGATGC+CGG 0.504256 1_3:+16381814 Msa0106740:three_prime_UTR
AAACCCTTGTGGATGAAAAC+GGG 0.509681 1_3:+16381231 Msa0106740:CDS
TTATGAGAGCAGTAAGCCAT+TGG 0.510367 1_3:+16381945 Msa0106740:three_prime_UTR
ATTTAACTCGAACATCCTCC+TGG 0.512376 1_3:-16378141 None:intergenic
GGATGAAGAGGAAGAAGAGG+AGG 0.513974 1_3:-16376243 None:intergenic
GCTTGGTTGGCTGTTTCAAA+GGG 0.514045 1_3:+16380135 Msa0106740:CDS
TTCTACACGACCATCAGACT+TGG 0.514057 1_3:+16378909 Msa0106740:CDS
AGCTTGTACAAATTCTGAAT+AGG 0.515245 1_3:+16377834 Msa0106740:CDS
GACGGCGACCTTTCATCCAC+AGG 0.515983 1_3:-16378256 None:intergenic
AGCAGGTGTTGATGGAGTTG+TGG 0.516270 1_3:-16378026 None:intergenic
GAATAAAGAGAAACTGAGTT+GGG 0.517489 1_3:+16381968 Msa0106740:three_prime_UTR
TGAGATAGAGCACCCATCAC+CGG 0.517584 1_3:+16381364 Msa0106740:CDS
ATTATTTCTCATCATGGCAT+AGG 0.518702 1_3:-16381267 None:intergenic
CCGTTGGTGGAGTTTGATGA+AGG 0.518926 1_3:+16376690 Msa0106740:CDS
CTCTTTAACAAATGATCCAC+AGG 0.520008 1_3:+16380525 Msa0106740:CDS
GTTGGCTGTTTCAAAGGGAA+AGG 0.520420 1_3:+16380140 Msa0106740:CDS
ATATTGTATAGGAAAATTTG+AGG 0.522913 1_3:+16377781 Msa0106740:intron
GCGAAGATGGCAATTTCGAT+GGG 0.523216 1_3:-16378204 None:intergenic
TATGGGAAATTCATGTGAAA+GGG 0.524245 1_3:-16376050 None:intergenic
ATCGGATATGAAGCCGATGT+TGG 0.526336 1_3:-16376519 None:intergenic
TAATTAATCAAAGACATGTA+AGG 0.529698 1_3:-16376196 None:intergenic
AATTGATAGGACAACACAGC+CGG 0.530262 1_3:-16378947 None:intergenic
GCTCAGTTTCTCCCTTCAGG+TGG 0.530619 1_3:+16381591 Msa0106740:CDS
AGCATCTACAACGGATTCTG+AGG 0.530622 1_3:+16380492 Msa0106740:CDS
AGTCCCCAACTCGTTTGACT+TGG 0.531710 1_3:-16381415 None:intergenic
GAAAACGCAGCCGGATGAAG+TGG 0.533996 1_3:+16376761 Msa0106740:CDS
AAGCTTCTAAGGCTTTGTTA+GGG 0.535780 1_3:+16376625 Msa0106740:CDS
CATATGATCTGCACTACTTG+TGG 0.536193 1_3:-16378068 None:intergenic
CAGCCGGATGAAGTGGCGGT+TGG 0.536524 1_3:+16376768 Msa0106740:CDS
TAATCAAAGACATGTAAGGC+TGG 0.536774 1_3:-16376192 None:intergenic
TCGCTGTGATGCCGGAGTTG+AGG 0.536969 1_3:+16381822 Msa0106740:three_prime_UTR
TCTAGGTCGCTGTTTCATTG+AGG 0.538184 1_3:+16379784 Msa0106740:CDS
CCTTCATCAAACTCCACCAA+CGG 0.538649 1_3:-16376690 None:intergenic
TATGAGAGCAGTAAGCCATT+GGG 0.540765 1_3:+16381946 Msa0106740:three_prime_UTR
AGAGATTCTTCGGTCTGTTG+TGG 0.540858 1_3:-16376435 None:intergenic
GCGTCGGAGGAAAACGCAGC+CGG 0.543520 1_3:+16376752 Msa0106740:CDS
GAGATAGAGCACCCATCACC+GGG 0.544324 1_3:+16381365 Msa0106740:CDS
TTAGCTCAATTCCCGGTGAT+GGG 0.545019 1_3:-16381376 None:intergenic
ACTGCAAAATTGCTGGATGT+TGG 0.546561 1_3:+16377878 Msa0106740:CDS
GATACGCATGTGCAAACCAT+GGG 0.547058 1_3:+16379444 Msa0106740:CDS
GTGTAGTAGGTTTCATCCGT+TGG 0.548903 1_3:+16376674 Msa0106740:CDS
CTGGTCATAATCGGCGTCGG+AGG 0.551550 1_3:+16376739 Msa0106740:CDS
ATCTCATCATAGACCATACC+AGG 0.551607 1_3:-16379719 None:intergenic
ATTAACCAAGTCAAACGAGT+TGG 0.553160 1_3:+16381410 Msa0106740:CDS
GTAGTAATCCTGTGGATGAA+AGG 0.553754 1_3:+16378248 Msa0106740:CDS
TCTCCTTTGGCAATTGTCGG+TGG 0.554427 1_3:+16379499 Msa0106740:CDS
AAAGCCTCATCCCTTGACTT+GGG 0.557399 1_3:-16380097 None:intergenic
TGTATTTCCACCGAATCTTG+AGG 0.558800 1_3:+16380438 Msa0106740:CDS
GACCCTTTAAAGAGATCAAG+AGG 0.558852 1_3:-16378415 None:intergenic
ATGATGCATAGTTCTATAGC+AGG 0.559123 1_3:-16382063 None:intergenic
GGGGAAATATTTACCTCCTG+TGG 0.559338 1_3:-16380541 None:intergenic
TTCCGTGGAACCCCTTATGT+AGG 0.560906 1_3:+16381569 Msa0106740:CDS
CAGACTTGGAGAGTTACATA+AGG 0.560965 1_3:+16378923 Msa0106740:CDS
TGAAGTTCATCCTTTCGCCC+TGG 0.561681 1_3:-16381685 None:intergenic
CTATGGGAAATTCATGTGAA+AGG 0.564858 1_3:-16376051 None:intergenic
GGAGACCTCCACGTTCCCCA+TGG 0.566104 1_3:-16379460 None:intergenic
AAACTTAAATCTTGGAAGCA+CGG 0.566490 1_3:+16376458 Msa0106740:CDS
CCCAGGAACGCTGCGAACAC+AGG 0.566597 1_3:+16378743 Msa0106740:CDS
TTGGAGAGTTACATAAGGCC+CGG 0.568740 1_3:+16378928 Msa0106740:CDS
AAGCATAAAACCAGGGCGAA+AGG 0.569920 1_3:+16381675 Msa0106740:three_prime_UTR
AGCGTTCCTGGGAAATGGCT+AGG 0.570204 1_3:-16378732 None:intergenic
TGTAGATGCTGCCAAATGCA+AGG 0.571013 1_3:-16380479 None:intergenic
GATAACATAGGAGGATGAAG+AGG 0.571188 1_3:-16376255 None:intergenic
GAGACTTCTATTTCATTGAA+GGG 0.571706 1_3:+16379526 Msa0106740:CDS
GGAGACACTGATATCAACTC+TGG 0.573695 1_3:-16379481 None:intergenic
AGGGTTGTCAACAGGGTCAG+TGG 0.575519 1_3:+16380300 Msa0106740:CDS
GAGGCCCAAGTCAAGGGATG+AGG 0.576270 1_3:+16380093 Msa0106740:CDS
ATTGATAGGACAACACAGCC+GGG 0.579359 1_3:-16378946 None:intergenic
ATAAACACTTCGAAGGAGAA+GGG 0.579651 1_3:+16380281 Msa0106740:CDS
ATCAACCAGTATATCCAGAA+GGG 0.582981 1_3:-16380260 None:intergenic
CAGTTAGCATCACACAAAGA+TGG 0.584117 1_3:+16379186 Msa0106740:CDS
AAGGAGAAGGGTTGTCAACA+GGG 0.587471 1_3:+16380293 Msa0106740:CDS
ATGTAACTCTCCAAGTCTGA+TGG 0.588830 1_3:-16378919 None:intergenic
TAGTAGGTTTCATCCGTTGG+TGG 0.589116 1_3:+16376677 Msa0106740:CDS
CCGTTCAGGATCTCCAACAT+CGG 0.590086 1_3:+16376506 Msa0106740:CDS
TGTTAGGGAATCAAATGCAA+CGG 0.593606 1_3:+16376640 Msa0106740:CDS
CTCAGTTTCTCCCTTCAGGT+GGG 0.594092 1_3:+16381592 Msa0106740:CDS
GTTGGTGAATGAAAACTCAA+AGG 0.594991 1_3:+16381645 Msa0106740:three_prime_UTR
TGTGTTTGTGTGTTATTCCG+TGG 0.595100 1_3:+16381554 Msa0106740:CDS
TATCAACCAGTATATCCAGA+AGG 0.595870 1_3:-16380261 None:intergenic
AAGCATCCTAGCCATTTCCC+AGG 0.599845 1_3:+16378726 Msa0106740:CDS
GAAAAGAAAGTGCACAAGCA+TGG 0.600104 1_3:+16380360 Msa0106740:CDS
CTGGTTGATAAACACTTCGA+AGG 0.600272 1_3:+16380274 Msa0106740:CDS
ATCATCGCGATGATGATAGG+AGG 0.601669 1_3:-16377948 None:intergenic
AGCCTACATAAGGGGTTCCA+CGG 0.602293 1_3:-16381571 None:intergenic
AGCCAATGCATCCATTTGCA+AGG 0.602317 1_3:+16379988 Msa0106740:CDS
CCAGGGCCCTCAAGATTCGG+TGG 0.602415 1_3:-16380445 None:intergenic
AGAAGATCTATCAAAAGCGA+AGG 0.602873 1_3:+16376563 Msa0106740:CDS
CAGTTATCAACTTGACACAT+CGG 0.602997 1_3:-16376537 None:intergenic
AACGCAGCCGGATGAAGTGG+CGG 0.604112 1_3:+16376764 Msa0106740:CDS
ATGGCACAATGTAATTCTGT+TGG 0.605548 1_3:+16381627 Msa0106740:exon
TATTCCTACAGGATCGTACT+GGG 0.605655 1_3:+16378679 Msa0106740:intron
TAACCAAGTCAAACGAGTTG+GGG 0.607095 1_3:+16381412 Msa0106740:CDS
AATTGATGTGATGATAACAT+AGG 0.607119 1_3:-16376267 None:intergenic
GTAGATTGGGTTGAAGTGCT+GGG 0.609912 1_3:+16381208 Msa0106740:intron
CATATGAGAGAAAGAAGCAG+TGG 0.610257 1_3:+16378085 Msa0106740:CDS
CCGAATCTTGAGGGCCCTGG+CGG 0.610502 1_3:+16380448 Msa0106740:CDS
AAGGAAAACGGAGTTGTAGA+CGG 0.611269 1_3:+16376709 Msa0106740:CDS
AAACAGCGACCTAGAACACT+AGG 0.611826 1_3:-16379776 None:intergenic
ATCGGAAAGTAGTAATCCTG+TGG 0.613254 1_3:+16378240 Msa0106740:CDS
TTAGCAGCAACCTGATTCAA+CGG 0.616434 1_3:-16376801 None:intergenic
GAATTAAAGAATCAACACGT+TGG 0.617872 1_3:-16379107 None:intergenic
TCGTCAAATTCAGACTCAAG+CGG 0.618525 1_3:-16380019 None:intergenic
TAAGGCTGGCTATAAGGTAA+GGG 0.620010 1_3:-16376178 None:intergenic
GGATACGCATGTGCAAACCA+TGG 0.620975 1_3:+16379443 Msa0106740:CDS
TATGATGAGATAAAATTGAG+TGG 0.621764 1_3:+16379731 Msa0106740:CDS
CTCATCATGGCATAGGCATG+TGG 0.622626 1_3:-16381260 None:intergenic
TGTGCAAACCATGGGGAACG+TGG 0.625779 1_3:+16379452 Msa0106740:CDS
GTAGATGCTGCCAAATGCAA+GGG 0.626471 1_3:-16380478 None:intergenic
AAATTCATCTCCACAACAGG+AGG 0.631154 1_3:-16378286 None:intergenic
GAAAGGATGAACTTCAGTTG+TGG 0.631401 1_3:+16381692 Msa0106740:three_prime_UTR
AGGATCAGGAGATCCTGGTA+TGG 0.632079 1_3:+16379706 Msa0106740:CDS
GATGTGTGATGCCATTTCAG+AGG 0.633081 1_3:+16380051 Msa0106740:CDS
GTGTAACTTATCCTCAACTC+CGG 0.633854 1_3:-16381833 None:intergenic
CCGATGTTGGAGATCCTGAA+CGG 0.636020 1_3:-16376506 None:intergenic
GCATTTGGCAGCATCTACAA+CGG 0.637611 1_3:+16380483 Msa0106740:CDS
TGAGTATCTGAATTCAAACT+GGG 0.640355 1_3:-16378529 None:intergenic
AAATTGAAAATCATGTCAGA+AGG 0.641061 1_3:-16382240 None:intergenic
ACAACAGGAGGAGATGAAGA+CGG 0.642019 1_3:-16378274 None:intergenic
TTGCTGGTCATAATCGGCGT+CGG 0.649273 1_3:+16376736 Msa0106740:CDS
AGAAACTGAGCCTACATAAG+GGG 0.649316 1_3:-16381579 None:intergenic
TCATCGCGATGATGATAGGA+GGG 0.651428 1_3:-16377947 None:intergenic
TGATGTGATGATAACATAGG+AGG 0.653159 1_3:-16376264 None:intergenic
AAGAAAATCCTTAGTTAACG+GGG 0.660888 1_3:-16377993 None:intergenic
ACCCTTTAAAGAGATCAAGA+GGG 0.661561 1_3:-16378414 None:intergenic
GCAAGGGAGTAATACCGCCA+GGG 0.662761 1_3:-16380462 None:intergenic
GTATTGAGAAGCATAAAACC+AGG 0.663385 1_3:+16381667 Msa0106740:three_prime_UTR
GCATCTACAACGGATTCTGA+GGG 0.663873 1_3:+16380493 Msa0106740:CDS
TAACTTGGCAGATCGAGAAG+CGG 0.672400 1_3:+16381767 Msa0106740:three_prime_UTR
TCAACACCTGCTCAAAATGG+CGG 0.675936 1_3:+16378037 Msa0106740:CDS
TGTCCACCGACAATTGCCAA+AGG 0.680091 1_3:-16379502 None:intergenic
GGAAAGAAACTGTTGCATGT+TGG 0.681755 1_3:+16380231 Msa0106740:CDS
GCTTGAGTCTGAATTTGACG+AGG 0.690205 1_3:+16380021 Msa0106740:CDS
ATGAGACTAAGAATAAGGGT+AGG 0.692473 1_3:-16376154 None:intergenic
AAGGTTCTCGAATGTGAACG+AGG 0.693475 1_3:+16380159 Msa0106740:CDS
GTATCTGAATTCAAACTGGG+AGG 0.694347 1_3:-16378526 None:intergenic
TTTAACAAATGATCCACAGG+AGG 0.702723 1_3:+16380528 Msa0106740:CDS
TATTGAGAAGCATAAAACCA+GGG 0.706168 1_3:+16381668 Msa0106740:three_prime_UTR
GCAAACCATGGGGAACGTGG+AGG 0.714807 1_3:+16379455 Msa0106740:CDS
ATACGCATGTGCAAACCATG+GGG 0.741686 1_3:+16379445 Msa0106740:CDS
ACTTTGTGCCAGGAGCAGAG+AGG 0.743535 1_3:-16379555 None:intergenic
GCAGCAACCTGATTCAACGG+CGG 0.745706 1_3:-16376798 None:intergenic
TGATGATTCAGATTGCCAGG+AGG 0.754316 1_3:+16378126 Msa0106740:CDS
GAAGTGCTGGGAAACCCTTG+TGG 0.767474 1_3:+16381220 Msa0106740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTAATTAATCAAAAAAA+TGG + chr1_3:16376209-16376228 Msa0106740:exon 10.0%
!!! GTTTTTTTTTTTTTTTTGAA+AGG + chr1_3:16376884-16376903 Msa0106740:intron 10.0%
!!! TTTTTTCTTTTTTTTAGGTT+TGG - chr1_3:16376095-16376114 None:intergenic 15.0%
!!! AGTAGTTTATATTACTATTT+TGG + chr1_3:16376967-16376986 Msa0106740:intron 15.0%
!!! ATTTGAAACAAATATTTTGT+TGG + chr1_3:16377013-16377032 Msa0106740:intron 15.0%
!!! TTTTTTCTTTTCTTTTGTAT+GGG + chr1_3:16377737-16377756 Msa0106740:intron 15.0%
!!! TTCTTATTCTTTTAATTAAG+AGG + chr1_3:16378614-16378633 Msa0106740:intron 15.0%
!!! ATTTTAAAACAAACTTTAGA+CGG + chr1_3:16379345-16379364 Msa0106740:intron 15.0%
!!! TAGATTTAATTCTTTTATGT+AGG - chr1_3:16380970-16380989 None:intergenic 15.0%
!! TAATTAATCAAAGACATGTA+AGG - chr1_3:16376199-16376218 None:intergenic 20.0%
!!! ATTTAAGTTTAGAGATTCTT+CGG - chr1_3:16376448-16376467 None:intergenic 20.0%
!!! TTTTTTTTTTTGAAAGGTCA+AGG + chr1_3:16376890-16376909 Msa0106740:intron 20.0%
!!! GTTCTTTTATAGCTAAATTT+TGG + chr1_3:16377129-16377148 Msa0106740:intron 20.0%
!!! TTTTTTTTTTTTGTGGTGTT+AGG + chr1_3:16377172-16377191 Msa0106740:intron 20.0%
!! TCAAAGTAAATAACAATCAA+GGG - chr1_3:16377274-16377293 None:intergenic 20.0%
!! TTCAAAGTAAATAACAATCA+AGG - chr1_3:16377275-16377294 None:intergenic 20.0%
!!! GTTTTTTCTTTTCTTTTGTA+TGG + chr1_3:16377736-16377755 Msa0106740:intron 20.0%
!!! TTGGTTTGATTATATTGTAT+AGG + chr1_3:16377770-16377789 Msa0106740:intron 20.0%
!! ATATTGTATAGGAAAATTTG+AGG + chr1_3:16377781-16377800 Msa0106740:intron 20.0%
!!! TGATGTCATTTTAATGAATA+TGG + chr1_3:16378810-16378829 Msa0106740:intron 20.0%
!!! GATCACTTTTTTTTTATCTT+AGG + chr1_3:16379246-16379265 Msa0106740:intron 20.0%
!! TACACGAATATAAAAATATG+AGG - chr1_3:16379272-16379291 None:intergenic 20.0%
!!! TTTTATATTCGTGTAACTTT+TGG + chr1_3:16379277-16379296 Msa0106740:intron 20.0%
!! TAATAAAAATCTAGCTATGA+TGG - chr1_3:16379380-16379399 None:intergenic 20.0%
!!! TAGCTAGATTTTTATTATCA+AGG + chr1_3:16379383-16379402 Msa0106740:intron 20.0%
!! AGTATCAAAAATAGTCTAAT+TGG + chr1_3:16380631-16380650 Msa0106740:intron 20.0%
!! GGCTATTTAAATAAATTTGA+AGG + chr1_3:16380849-16380868 Msa0106740:intron 20.0%
!!! TACTGATTTATATTCTAAGT+AGG - chr1_3:16381052-16381071 None:intergenic 20.0%
!! TAATCACTCTTATAATATGT+TGG + chr1_3:16381286-16381305 Msa0106740:CDS 20.0%
!! CAAAAAAATGAACATATTAG+AGG + chr1_3:16381730-16381749 Msa0106740:three_prime_UTR 20.0%
!!! TATTTGAGGATATTGATAAT+AGG + chr1_3:16382119-16382138 Msa0106740:three_prime_UTR 20.0%
!!! ATTTGAGGATATTGATAATA+GGG + chr1_3:16382120-16382139 Msa0106740:three_prime_UTR 20.0%
!!! TCTACAAGAACAAATTTTAA+TGG - chr1_3:16382281-16382300 None:intergenic 20.0%
!! TTCAGATCTAAAGTAACATA+AGG - chr1_3:16376020-16376039 None:intergenic 25.0%
! CACACACAAAATAAAAAGTA+AGG + chr1_3:16376122-16376141 Msa0106740:five_prime_UTR 25.0%
! AATTGATGTGATGATAACAT+AGG - chr1_3:16376270-16376289 None:intergenic 25.0%
!!! TGATAATAGATCACGTTTTT+TGG - chr1_3:16376310-16376329 None:intergenic 25.0%
! GAATCTCTAAACTTAAATCT+TGG + chr1_3:16376450-16376469 Msa0106740:CDS 25.0%
! CAAAATTGAGAATCTGATAA+AGG - chr1_3:16377519-16377538 None:intergenic 25.0%
!! AATTTTCGAAAATCGTTTCT+AGG + chr1_3:16377664-16377683 Msa0106740:intron 25.0%
!!! AATTCTAATGGTATTTTGAC+TGG + chr1_3:16378337-16378356 Msa0106740:CDS 25.0%
! TTAAAACCCAAAAGACAAAA+TGG - chr1_3:16378645-16378664 None:intergenic 25.0%
! ACATTGAAGCATAAATTGAT+AGG - chr1_3:16378963-16378982 None:intergenic 25.0%
! TAATCAACAATCCAATTACA+GGG - chr1_3:16379322-16379341 None:intergenic 25.0%
! TAGATTTAAACTGAAATTCC+AGG + chr1_3:16379418-16379437 Msa0106740:intron 25.0%
! TATACATCATCAGAAGTTAT+AGG + chr1_3:16379686-16379705 Msa0106740:CDS 25.0%
! TATGATGAGATAAAATTGAG+TGG + chr1_3:16379731-16379750 Msa0106740:CDS 25.0%
!!! TAACTTTTTTGTCAAAGTAG+GGG - chr1_3:16380565-16380584 None:intergenic 25.0%
!!! GTAACTTTTTTGTCAAAGTA+GGG - chr1_3:16380566-16380585 None:intergenic 25.0%
!!! AGTAACTTTTTTGTCAAAGT+AGG - chr1_3:16380567-16380586 None:intergenic 25.0%
! TTTGACAAAAAAGTTACTAG+AGG + chr1_3:16380569-16380588 Msa0106740:intron 25.0%
!!! GAGTTTTTTTTATAGACAAG+TGG + chr1_3:16380748-16380767 Msa0106740:intron 25.0%
! GAACATATTAGAGGTTAATT+TGG + chr1_3:16381739-16381758 Msa0106740:three_prime_UTR 25.0%
!! TCATTGATCTTTGAGAAAAA+AGG - chr1_3:16382032-16382051 None:intergenic 25.0%
! GTTACTGTAAAGTTTATTTG+AGG + chr1_3:16382105-16382124 Msa0106740:three_prime_UTR 25.0%
!! TTTGAGGATATTGATAATAG+GGG + chr1_3:16382121-16382140 Msa0106740:three_prime_UTR 25.0%
! CACTTTGTAATCATATAGTA+TGG - chr1_3:16382151-16382170 None:intergenic 25.0%
! AAATTGAAAATCATGTCAGA+AGG - chr1_3:16382243-16382262 None:intergenic 25.0%
TATGGGAAATTCATGTGAAA+GGG - chr1_3:16376053-16376072 None:intergenic 30.0%
!!! TTTTTTAGGTTTGGTGTTTG+AGG - chr1_3:16376086-16376105 None:intergenic 30.0%
!!! TAATAGATCACGTTTTTTGG+TGG - chr1_3:16376307-16376326 None:intergenic 30.0%
TTCACATCCAAAACGATAAT+TGG + chr1_3:16376343-16376362 Msa0106740:CDS 30.0%
ATAATTGGAACCCTAAAGAA+TGG + chr1_3:16376358-16376377 Msa0106740:CDS 30.0%
!! TTGATTTTGCTGTCATGAAA+TGG - chr1_3:16376398-16376417 None:intergenic 30.0%
AAACTTAAATCTTGGAAGCA+CGG + chr1_3:16376458-16376477 Msa0106740:CDS 30.0%
!!! TTTTTTGAAAGGTCAAGGTT+TGG + chr1_3:16376895-16376914 Msa0106740:intron 30.0%
!! CAAGGTTTGGTTTCTATTTT+TGG + chr1_3:16376908-16376927 Msa0106740:intron 30.0%
! TTGTATGGGCTAATATTGTT+TGG + chr1_3:16377751-16377770 Msa0106740:intron 30.0%
TAGGAAAATTTGAGGAAAGA+AGG + chr1_3:16377789-16377808 Msa0106740:intron 30.0%
AGCTTGTACAAATTCTGAAT+AGG + chr1_3:16377834-16377853 Msa0106740:CDS 30.0%
AAGAAAATCCTTAGTTAACG+GGG - chr1_3:16377996-16378015 None:intergenic 30.0%
CAAGAAAATCCTTAGTTAAC+GGG - chr1_3:16377997-16378016 None:intergenic 30.0%
GCAAGAAAATCCTTAGTTAA+CGG - chr1_3:16377998-16378017 None:intergenic 30.0%
!!! TTCGCGAAAGTATTTTTCAT+CGG + chr1_3:16378222-16378241 Msa0106740:CDS 30.0%
ATTAGAGGTCTCAATTCTAA+TGG + chr1_3:16378325-16378344 Msa0106740:CDS 30.0%
!!! AATGGTATTTTGACTGGATT+TGG + chr1_3:16378343-16378362 Msa0106740:CDS 30.0%
TAGTAGTACAACTATGACTT+TGG - chr1_3:16378393-16378412 None:intergenic 30.0%
TGAGTATCTGAATTCAAACT+GGG - chr1_3:16378532-16378551 None:intergenic 30.0%
!! GGGTTTTAATCTATTTGTGA+TGG + chr1_3:16378656-16378675 Msa0106740:intron 30.0%
! CCGATTCGCAAAATATTAAT+GGG - chr1_3:16378789-16378808 None:intergenic 30.0%
! CCCATTAATATTTTGCGAAT+CGG + chr1_3:16378786-16378805 Msa0106740:intron 30.0%
! TCCGATTCGCAAAATATTAA+TGG - chr1_3:16378790-16378809 None:intergenic 30.0%
! GTCCTTTTCAGATTTACAAT+TGG + chr1_3:16378884-16378903 Msa0106740:intron 30.0%
AGCCAATTGTAAATCTGAAA+AGG - chr1_3:16378889-16378908 None:intergenic 30.0%
GAATTAAAGAATCAACACGT+TGG - chr1_3:16379110-16379129 None:intergenic 30.0%
ATAACTCAGATTCTGATTTC+TGG + chr1_3:16379130-16379149 Msa0106740:CDS 30.0%
! GGAAGATTTCTTGTTTATTC+TGG + chr1_3:16379159-16379178 Msa0106740:CDS 30.0%
! TATATTCGTGTAACTTTTGG+AGG + chr1_3:16379280-16379299 Msa0106740:intron 30.0%
AATCAACAATCCAATTACAG+GGG - chr1_3:16379321-16379340 None:intergenic 30.0%
GTAATCAACAATCCAATTAC+AGG - chr1_3:16379323-16379342 None:intergenic 30.0%
TTTAAACTGAAATTCCAGGA+AGG + chr1_3:16379422-16379441 Msa0106740:intron 30.0%
GAGACTTCTATTTCATTGAA+GGG + chr1_3:16379526-16379545 Msa0106740:CDS 30.0%
CAATGAATCCTGCAAAATTT+AGG - chr1_3:16379650-16379669 None:intergenic 30.0%
!! AGGAGCATGAACATAATTTT+GGG + chr1_3:16380071-16380090 Msa0106740:CDS 30.0%
!!! AACTTTTTTGTCAAAGTAGG+GGG - chr1_3:16380564-16380583 None:intergenic 30.0%
AATTCAGTAAATCCGAATGA+GGG - chr1_3:16380601-16380620 None:intergenic 30.0%
TTAAACCCCATAAAAACCAT+AGG - chr1_3:16380661-16380680 None:intergenic 30.0%
! GGTTTTTATGGGGTTTAAAT+AGG + chr1_3:16380663-16380682 Msa0106740:intron 30.0%
GTTGTCAAAAAGAAGAACAA+AGG + chr1_3:16380886-16380905 Msa0106740:intron 30.0%
!! GACATACTTTAAGGTTGATA+AGG - chr1_3:16381021-16381040 None:intergenic 30.0%
TCAGTAGTTATCATGTTGTT+TGG + chr1_3:16381066-16381085 Msa0106740:intron 30.0%
AATCCTAAGTTGTAGAGAAA+AGG - chr1_3:16381104-16381123 None:intergenic 30.0%
AAAATACAGACAAGAAGTCA+AGG - chr1_3:16381176-16381195 None:intergenic 30.0%
!!! CTTGTCTGTATTTTTTATGC+TGG + chr1_3:16381182-16381201 Msa0106740:intron 30.0%
! ATTATTTCTCATCATGGCAT+AGG - chr1_3:16381270-16381289 None:intergenic 30.0%
! AGAGTGATTATTTCTCATCA+TGG - chr1_3:16381276-16381295 None:intergenic 30.0%
AACTTCACTTCTTTGTCTAT+CGG - chr1_3:16381327-16381346 None:intergenic 30.0%
! TATTGAGAAGCATAAAACCA+GGG + chr1_3:16381668-16381687 Msa0106740:three_prime_UTR 30.0%
! GTTAATTTGGAGCTATAACT+TGG + chr1_3:16381752-16381771 Msa0106740:three_prime_UTR 30.0%
AAAATTTCAACACCCAATTC+AGG - chr1_3:16381858-16381877 None:intergenic 30.0%
! TTTTCTGTCCTTATATTGTG+AGG - chr1_3:16381925-16381944 None:intergenic 30.0%
GAATAAAGAGAAACTGAGTT+GGG + chr1_3:16381968-16381987 Msa0106740:three_prime_UTR 30.0%
GTTGATGCAGTCAAATAATT+TGG + chr1_3:16381996-16382015 Msa0106740:three_prime_UTR 30.0%
! TTGATCTTTGAGAAAAAAGG+AGG - chr1_3:16382029-16382048 None:intergenic 30.0%
CTATGGGAAATTCATGTGAA+AGG - chr1_3:16376054-16376073 None:intergenic 35.0%
ATGAGACTAAGAATAAGGGT+AGG - chr1_3:16376157-16376176 None:intergenic 35.0%
GGGTATGAGACTAAGAATAA+GGG - chr1_3:16376161-16376180 None:intergenic 35.0%
AGGGTATGAGACTAAGAATA+AGG - chr1_3:16376162-16376181 None:intergenic 35.0%
TAATCAAAGACATGTAAGGC+TGG - chr1_3:16376195-16376214 None:intergenic 35.0%
TGATGTGATGATAACATAGG+AGG - chr1_3:16376267-16376286 None:intergenic 35.0%
! TAGGGTTCCAATTATCGTTT+TGG - chr1_3:16376353-16376372 None:intergenic 35.0%
GAACCCTAAAGAATGGAATT+GGG + chr1_3:16376365-16376384 Msa0106740:CDS 35.0%
TGTCCCAATTCCATTCTTTA+GGG - chr1_3:16376371-16376390 None:intergenic 35.0%
! AACTTAAATCTTGGAAGCAC+GGG + chr1_3:16376459-16376478 Msa0106740:CDS 35.0%
CAGTTATCAACTTGACACAT+CGG - chr1_3:16376540-16376559 None:intergenic 35.0%
AGAAGATCTATCAAAAGCGA+AGG + chr1_3:16376563-16376582 Msa0106740:CDS 35.0%
AGCTCATAGTAAAGCTTCTA+AGG + chr1_3:16376614-16376633 Msa0106740:CDS 35.0%
!! AAAGCTTCTAAGGCTTTGTT+AGG + chr1_3:16376624-16376643 Msa0106740:CDS 35.0%
!! AAGCTTCTAAGGCTTTGTTA+GGG + chr1_3:16376625-16376644 Msa0106740:CDS 35.0%
TGTTAGGGAATCAAATGCAA+CGG + chr1_3:16376640-16376659 Msa0106740:CDS 35.0%
TGGAGTTTGATGAAGGAAAA+CGG + chr1_3:16376697-16376716 Msa0106740:CDS 35.0%
TAATTGGAACATGCCCTTAT+TGG + chr1_3:16377242-16377261 Msa0106740:intron 35.0%
TGTACAAGCTGTTCTTTATC+TGG - chr1_3:16377824-16377843 None:intergenic 35.0%
! AATTTTGCAGTAAGATCAGC+GGG - chr1_3:16377869-16377888 None:intergenic 35.0%
! CAATTTTGCAGTAAGATCAG+CGG - chr1_3:16377870-16377889 None:intergenic 35.0%
TGATCTTACTGCAAAATTGC+TGG + chr1_3:16377871-16377890 Msa0106740:CDS 35.0%
TGGCAATCTGAATCATCATT+TGG - chr1_3:16378124-16378143 None:intergenic 35.0%
AAATGATGATTCAGATTGCC+AGG + chr1_3:16378123-16378142 Msa0106740:CDS 35.0%
GAAAAATACTTTCGCGAAGA+TGG - chr1_3:16378220-16378239 None:intergenic 35.0%
ATCCCTCTTGATCTCTTTAA+AGG + chr1_3:16378412-16378431 Msa0106740:CDS 35.0%
TCCCTCTTGATCTCTTTAAA+GGG + chr1_3:16378413-16378432 Msa0106740:CDS 35.0%
! ACCCTTTAAAGAGATCAAGA+GGG - chr1_3:16378417-16378436 None:intergenic 35.0%
! CAAAGTGTACCATTTAAAGC+TGG + chr1_3:16378475-16378494 Msa0106740:CDS 35.0%
!! GATGCATAACCAGCTTTAAA+TGG - chr1_3:16378487-16378506 None:intergenic 35.0%
TAAAGCTGGTTATGCATCTT+CGG + chr1_3:16378489-16378508 Msa0106740:CDS 35.0%
CTGAGTATCTGAATTCAAAC+TGG - chr1_3:16378533-16378552 None:intergenic 35.0%
CAGTTTGAATTCAGATACTC+AGG + chr1_3:16378531-16378550 Msa0106740:CDS 35.0%
TTGAATTCAGATACTCAGGT+TGG + chr1_3:16378535-16378554 Msa0106740:intron 35.0%
TGAATTCAGATACTCAGGTT+GGG + chr1_3:16378536-16378555 Msa0106740:intron 35.0%
!! GCTTAGCCATTTTGTCTTTT+GGG + chr1_3:16378636-16378655 Msa0106740:intron 35.0%
ATTTGTGATGGTATTCCTAC+AGG + chr1_3:16378668-16378687 Msa0106740:intron 35.0%
CAATATGCAAGTAATCAGCA+AGG - chr1_3:16379057-16379076 None:intergenic 35.0%
! GATTCTGATTTCTGGAGAAA+TGG + chr1_3:16379138-16379157 Msa0106740:CDS 35.0%
!!! GACTAGTTTTGATTTCTGAC+TGG + chr1_3:16379219-16379238 Msa0106740:intron 35.0%
ATCAACAATCCAATTACAGG+GGG - chr1_3:16379320-16379339 None:intergenic 35.0%
GGAGACTTCTATTTCATTGA+AGG + chr1_3:16379525-16379544 Msa0106740:CDS 35.0%
ATAACACAACGTCCAGAAAA+GGG - chr1_3:16379595-16379614 None:intergenic 35.0%
! CTGTTTGTCCTAAATTTTGC+AGG + chr1_3:16379639-16379658 Msa0106740:intron 35.0%
TCATCAGAAGTTATAGGATC+AGG + chr1_3:16379692-16379711 Msa0106740:CDS 35.0%
AATACATCTCCTAGTGTTCT+AGG + chr1_3:16379767-16379786 Msa0106740:CDS 35.0%
CAACTTACATGTTTGTGAAC+AGG + chr1_3:16379925-16379944 Msa0106740:intron 35.0%
! GTTTGTGAACAGGTTGAAAA+TGG + chr1_3:16379935-16379954 Msa0106740:intron 35.0%
! ACAGGTTGAAAATGGTTTCA+AGG + chr1_3:16379943-16379962 Msa0106740:intron 35.0%
! CAGGTTGAAAATGGTTTCAA+GGG + chr1_3:16379944-16379963 Msa0106740:intron 35.0%
!! GAGGAGCATGAACATAATTT+TGG + chr1_3:16380070-16380089 Msa0106740:CDS 35.0%
! AGCATGAACATAATTTTGGG+AGG + chr1_3:16380074-16380093 Msa0106740:CDS 35.0%
!! TTGCACTTTTTGAATGAGCT+TGG + chr1_3:16380118-16380137 Msa0106740:CDS 35.0%
! ACTTTTTGAATGAGCTTGGT+TGG + chr1_3:16380122-16380141 Msa0106740:CDS 35.0%
!! ATTTGTACTGACGTTTTCTG+TGG + chr1_3:16380210-16380229 Msa0106740:CDS 35.0%
ATCAACCAGTATATCCAGAA+GGG - chr1_3:16380263-16380282 None:intergenic 35.0%
TATCAACCAGTATATCCAGA+AGG - chr1_3:16380264-16380283 None:intergenic 35.0%
ATAAACACTTCGAAGGAGAA+GGG + chr1_3:16380281-16380300 Msa0106740:CDS 35.0%
TCACTGCTCTATTTAGAAGT+TGG - chr1_3:16380342-16380361 None:intergenic 35.0%
CGGTGGAAATACATATTTCT+TGG - chr1_3:16380431-16380450 None:intergenic 35.0%
CTCTTTAACAAATGATCCAC+AGG + chr1_3:16380525-16380544 Msa0106740:CDS 35.0%
TTTAACAAATGATCCACAGG+AGG + chr1_3:16380528-16380547 Msa0106740:CDS 35.0%
!!! ACTTTTTTGTCAAAGTAGGG+GGG - chr1_3:16380563-16380582 None:intergenic 35.0%
CAATTCAGTAAATCCGAATG+AGG - chr1_3:16380602-16380621 None:intergenic 35.0%
TAGTCTAATTGGATTGCCTA+TGG + chr1_3:16380642-16380661 Msa0106740:intron 35.0%
! TGGATTGCCTATGGTTTTTA+TGG + chr1_3:16380651-16380670 Msa0106740:intron 35.0%
! GGATTGCCTATGGTTTTTAT+GGG + chr1_3:16380652-16380671 Msa0106740:intron 35.0%
! GATTGCCTATGGTTTTTATG+GGG + chr1_3:16380653-16380672 Msa0106740:intron 35.0%
AAAAAAACTCTGACACAGTC+TGG - chr1_3:16380738-16380757 None:intergenic 35.0%
TTTAAATAGCCAAGCCTGTT+AGG - chr1_3:16380840-16380859 None:intergenic 35.0%
ATATTCTAAGTAGGCTGACA+AGG - chr1_3:16381043-16381062 None:intergenic 35.0%
! CATCCTTTTCTCTACAACTT+AGG + chr1_3:16381098-16381117 Msa0106740:intron 35.0%
! TTTTATGCTGGTGTGTAGAT+TGG + chr1_3:16381194-16381213 Msa0106740:intron 35.0%
TTTATGCTGGTGTGTAGATT+GGG + chr1_3:16381195-16381214 Msa0106740:intron 35.0%
TTTGTCTATCGGAACGTTTA+CGG - chr1_3:16381316-16381335 None:intergenic 35.0%
! TTTTGCATTAGCTCAATTCC+CGG - chr1_3:16381386-16381405 None:intergenic 35.0%
ATTAACCAAGTCAAACGAGT+TGG + chr1_3:16381410-16381429 Msa0106740:CDS 35.0%
TTAACCAAGTCAAACGAGTT+GGG + chr1_3:16381411-16381430 Msa0106740:CDS 35.0%
! TGAACCGGAAAATCTTCTTT+TGG - chr1_3:16381474-16381493 None:intergenic 35.0%
! AAAGAAGATTTTCCGGTTCA+CGG + chr1_3:16381474-16381493 Msa0106740:CDS 35.0%
! GCTAGCATCGAATGAATAAA+GGG - chr1_3:16381515-16381534 None:intergenic 35.0%
! AGCTAGCATCGAATGAATAA+AGG - chr1_3:16381516-16381535 None:intergenic 35.0%
AGGTGGGAAAACTTGAATTA+TGG + chr1_3:16381608-16381627 Msa0106740:CDS 35.0%
ATGGCACAATGTAATTCTGT+TGG + chr1_3:16381627-16381646 Msa0106740:exon 35.0%
! GTTGGTGAATGAAAACTCAA+AGG + chr1_3:16381645-16381664 Msa0106740:three_prime_UTR 35.0%
! GTATTGAGAAGCATAAAACC+AGG + chr1_3:16381667-16381686 Msa0106740:three_prime_UTR 35.0%
AGGATAAGTTACACCTGAAT+TGG + chr1_3:16381842-16381861 Msa0106740:three_prime_UTR 35.0%
GGATAAGTTACACCTGAATT+GGG + chr1_3:16381843-16381862 Msa0106740:three_prime_UTR 35.0%
GTTCTATCTGGTCTAAAAAG+TGG - chr1_3:16381898-16381917 None:intergenic 35.0%
GAACATGTCCTCACAATATA+AGG + chr1_3:16381914-16381933 Msa0106740:three_prime_UTR 35.0%
CAGTTTCTCTTTATTCCCAA+TGG - chr1_3:16381964-16381983 None:intergenic 35.0%
GGAATAAAGAGAAACTGAGT+TGG + chr1_3:16381967-16381986 Msa0106740:three_prime_UTR 35.0%
! ATGATGCATAGTTCTATAGC+AGG - chr1_3:16382066-16382085 None:intergenic 35.0%
! TAAGGCTGGCTATAAGGTAA+GGG - chr1_3:16376181-16376200 None:intergenic 40.0%
GATAACATAGGAGGATGAAG+AGG - chr1_3:16376258-16376277 None:intergenic 40.0%
GGAACCCTAAAGAATGGAAT+TGG + chr1_3:16376364-16376383 Msa0106740:CDS 40.0%
CTGTCCCAATTCCATTCTTT+AGG - chr1_3:16376372-16376391 None:intergenic 40.0%
GGATTATCATCGACGTCATA+AGG + chr1_3:16376584-16376603 Msa0106740:CDS 40.0%
!! GGTTTTGTCAACAGTGTAGT+AGG + chr1_3:16376661-16376680 Msa0106740:CDS 40.0%
AAGGAAAACGGAGTTGTAGA+CGG + chr1_3:16376709-16376728 Msa0106740:CDS 40.0%
TTAGCAGCAACCTGATTCAA+CGG - chr1_3:16376804-16376823 None:intergenic 40.0%
! GAATCAGGTTGCTGCTAATT+TGG + chr1_3:16376806-16376825 Msa0106740:CDS 40.0%
! TTGTTGACTGCTATTGCTGA+TGG + chr1_3:16376840-16376859 Msa0106740:CDS 40.0%
! TCAAGGGCATGTTCCAATAA+GGG - chr1_3:16377258-16377277 None:intergenic 40.0%
! ATCAAGGGCATGTTCCAATA+AGG - chr1_3:16377259-16377278 None:intergenic 40.0%
ACTGCAAAATTGCTGGATGT+TGG + chr1_3:16377878-16377897 Msa0106740:CDS 40.0%
TTGATCATCGCGATGATGAT+AGG - chr1_3:16377954-16377973 None:intergenic 40.0%
CATATGATCTGCACTACTTG+TGG - chr1_3:16378071-16378090 None:intergenic 40.0%
CATATGAGAGAAAGAAGCAG+TGG + chr1_3:16378085-16378104 Msa0106740:CDS 40.0%
ATTTAACTCGAACATCCTCC+TGG - chr1_3:16378144-16378163 None:intergenic 40.0%
! AAATTGCCGCTGCAACTTTT+TGG + chr1_3:16378160-16378179 Msa0106740:CDS 40.0%
ATCGGAAAGTAGTAATCCTG+TGG + chr1_3:16378240-16378259 Msa0106740:CDS 40.0%
GTAGTAATCCTGTGGATGAA+AGG + chr1_3:16378248-16378267 Msa0106740:CDS 40.0%
AAATTCATCTCCACAACAGG+AGG - chr1_3:16378289-16378308 None:intergenic 40.0%
CCAAAATTCATCTCCACAAC+AGG - chr1_3:16378292-16378311 None:intergenic 40.0%
! CCTGTTGTGGAGATGAATTT+TGG + chr1_3:16378289-16378308 Msa0106740:CDS 40.0%
!! GAGATGAATTTTGGTCTGCA+AGG + chr1_3:16378298-16378317 Msa0106740:CDS 40.0%
!! ATGAATTTTGGTCTGCAAGG+TGG + chr1_3:16378301-16378320 Msa0106740:CDS 40.0%
!!! GGTATTTTGACTGGATTTGG+AGG + chr1_3:16378346-16378365 Msa0106740:CDS 40.0%
ATTTGGAGGCCATGCAAATA+AGG + chr1_3:16378360-16378379 Msa0106740:CDS 40.0%
!! GGCTAGTTTCCTTATTTGCA+TGG - chr1_3:16378372-16378391 None:intergenic 40.0%
! GACCCTTTAAAGAGATCAAG+AGG - chr1_3:16378418-16378437 None:intergenic 40.0%
AAAGCTGGTTATGCATCTTC+GGG + chr1_3:16378490-16378509 Msa0106740:CDS 40.0%
GTATCTGAATTCAAACTGGG+AGG - chr1_3:16378529-16378548 None:intergenic 40.0%
TTCAAAGCAAGCATGAACCA+GGG - chr1_3:16378572-16378591 None:intergenic 40.0%
ATTCAAAGCAAGCATGAACC+AGG - chr1_3:16378573-16378592 None:intergenic 40.0%
!! GGCTTAGCCATTTTGTCTTT+TGG + chr1_3:16378635-16378654 Msa0106740:intron 40.0%
TATTCCTACAGGATCGTACT+GGG + chr1_3:16378679-16378698 Msa0106740:intron 40.0%
TACTAACACGTCTTTGCATC+TGG - chr1_3:16378850-16378869 None:intergenic 40.0%
ATGTAACTCTCCAAGTCTGA+TGG - chr1_3:16378922-16378941 None:intergenic 40.0%
CAGACTTGGAGAGTTACATA+AGG + chr1_3:16378923-16378942 Msa0106740:CDS 40.0%
AATTGATAGGACAACACAGC+CGG - chr1_3:16378950-16378969 None:intergenic 40.0%
! TTCAATGTCTTCTGCTGCTT+GGG + chr1_3:16378975-16378994 Msa0106740:CDS 40.0%
CAGTTAGCATCACACAAAGA+TGG + chr1_3:16379186-16379205 Msa0106740:CDS 40.0%
! CTAATTTTCCCCCCTGTAAT+TGG + chr1_3:16379308-16379327 Msa0106740:intron 40.0%
TCAACAATCCAATTACAGGG+GGG - chr1_3:16379319-16379338 None:intergenic 40.0%
GTTGATATCAGTGTCTCCTT+TGG + chr1_3:16379486-16379505 Msa0106740:CDS 40.0%
ATCAGTACTAACTTTGTGCC+AGG - chr1_3:16379568-16379587 None:intergenic 40.0%
!!! GTACTGATTTTCCCCTTTTC+TGG + chr1_3:16379580-16379599 Msa0106740:intron 40.0%
TAACACAACGTCCAGAAAAG+GGG - chr1_3:16379594-16379613 None:intergenic 40.0%
CATAACACAACGTCCAGAAA+AGG - chr1_3:16379596-16379615 None:intergenic 40.0%
CGTTGTGTTATGCTTCTTTC+TGG + chr1_3:16379604-16379623 Msa0106740:intron 40.0%
ATCTCATCATAGACCATACC+AGG - chr1_3:16379722-16379741 None:intergenic 40.0%
ACTGCACATGATTACTGTGA+TGG + chr1_3:16379827-16379846 Msa0106740:intron 40.0%
TCGTCAAATTCAGACTCAAG+CGG - chr1_3:16380022-16380041 None:intergenic 40.0%
! ATGTTCATGCTCCTCTGAAA+TGG - chr1_3:16380065-16380084 None:intergenic 40.0%
GGAAAGAAACTGTTGCATGT+TGG + chr1_3:16380231-16380250 Msa0106740:CDS 40.0%
CAAAACCCTTCTGGATATAC+TGG + chr1_3:16380255-16380274 Msa0106740:CDS 40.0%
!! CTGGTTGATAAACACTTCGA+AGG + chr1_3:16380274-16380293 Msa0106740:CDS 40.0%
GATAAACACTTCGAAGGAGA+AGG + chr1_3:16380280-16380299 Msa0106740:CDS 40.0%
! GAAAAGAAAGTGCACAAGCA+TGG + chr1_3:16380360-16380379 Msa0106740:CDS 40.0%
TGTATTTCCACCGAATCTTG+AGG + chr1_3:16380438-16380457 Msa0106740:CDS 40.0%
GTATTTCCACCGAATCTTGA+GGG + chr1_3:16380439-16380458 Msa0106740:CDS 40.0%
TAGAGGAAATGTCCCTCATT+CGG + chr1_3:16380586-16380605 Msa0106740:intron 40.0%
CCTAACATATACTAGGCAGT+AGG - chr1_3:16380715-16380734 None:intergenic 40.0%
CCTACTGCCTAGTATATGTT+AGG + chr1_3:16380712-16380731 Msa0106740:intron 40.0%
AGTCTGGCCTAACATATACT+AGG - chr1_3:16380722-16380741 None:intergenic 40.0%
TAAATCCTCTTGTGCCTAAC+AGG + chr1_3:16380823-16380842 Msa0106740:intron 40.0%
GCTGACAAGGACATACTTTA+AGG - chr1_3:16381030-16381049 None:intergenic 40.0%
GAAACCCTTGTGGATGAAAA+CGG + chr1_3:16381230-16381249 Msa0106740:CDS 40.0%
AAACCCTTGTGGATGAAAAC+GGG + chr1_3:16381231-16381250 Msa0106740:CDS 40.0%
TTGTCTATCGGAACGTTTAC+GGG - chr1_3:16381315-16381334 None:intergenic 40.0%
TAACCAAGTCAAACGAGTTG+GGG + chr1_3:16381412-16381431 Msa0106740:CDS 40.0%
AACTTCTGCAATTGCACACT+TGG - chr1_3:16381447-16381466 None:intergenic 40.0%
! TGTGTTTGTGTGTTATTCCG+TGG + chr1_3:16381554-16381573 Msa0106740:CDS 40.0%
AGAAACTGAGCCTACATAAG+GGG - chr1_3:16381582-16381601 None:intergenic 40.0%
GAGAAACTGAGCCTACATAA+GGG - chr1_3:16381583-16381602 None:intergenic 40.0%
!! TTCAAGTTTTCCCACCTGAA+GGG - chr1_3:16381605-16381624 None:intergenic 40.0%
!! ATTCAAGTTTTCCCACCTGA+AGG - chr1_3:16381606-16381625 None:intergenic 40.0%
GAAAGGATGAACTTCAGTTG+TGG + chr1_3:16381692-16381711 Msa0106740:three_prime_UTR 40.0%
GTGTAACTTATCCTCAACTC+CGG - chr1_3:16381836-16381855 None:intergenic 40.0%
TTGTGAGGACATGTTCTATC+TGG - chr1_3:16381910-16381929 None:intergenic 40.0%
TTATGAGAGCAGTAAGCCAT+TGG + chr1_3:16381945-16381964 Msa0106740:three_prime_UTR 40.0%
TATGAGAGCAGTAAGCCATT+GGG + chr1_3:16381946-16381965 Msa0106740:three_prime_UTR 40.0%
TTTGAGGAGAGAGGAGCTAT+GGG - chr1_3:16376070-16376089 None:intergenic 45.0%
! GTAAGGCTGGCTATAAGGTA+AGG - chr1_3:16376182-16376201 None:intergenic 45.0%
! GACATGTAAGGCTGGCTATA+AGG - chr1_3:16376187-16376206 None:intergenic 45.0%
AGAGATTCTTCGGTCTGTTG+TGG - chr1_3:16376438-16376457 None:intergenic 45.0%
GCAAACAAACGAATCCGTTC+AGG + chr1_3:16376492-16376511 Msa0106740:CDS 45.0%
ATCGGATATGAAGCCGATGT+TGG - chr1_3:16376522-16376541 None:intergenic 45.0%
GTGTAGTAGGTTTCATCCGT+TGG + chr1_3:16376674-16376693 Msa0106740:CDS 45.0%
TAGTAGGTTTCATCCGTTGG+TGG + chr1_3:16376677-16376696 Msa0106740:CDS 45.0%
CCTTCATCAAACTCCACCAA+CGG - chr1_3:16376693-16376712 None:intergenic 45.0%
!! GGAGACTTGCTGGTCATAAT+CGG + chr1_3:16376730-16376749 Msa0106740:CDS 45.0%
GCTATTGCTGATGGTTCTCA+AGG + chr1_3:16376849-16376868 Msa0106740:CDS 45.0%
TGCTGATGGTTCTCAAGGTT+TGG + chr1_3:16376854-16376873 Msa0106740:intron 45.0%
CAGTAAGATCAGCGGGTAAA+GGG - chr1_3:16377862-16377881 None:intergenic 45.0%
AGGAGGGTGAAGTTTGCATT+TGG - chr1_3:16377934-16377953 None:intergenic 45.0%
TCATCGCGATGATGATAGGA+GGG - chr1_3:16377950-16377969 None:intergenic 45.0%
ATCATCGCGATGATGATAGG+AGG - chr1_3:16377951-16377970 None:intergenic 45.0%
AATCCTTAGTTAACGGGGCA+GGG - chr1_3:16377991-16378010 None:intergenic 45.0%
AAATCCTTAGTTAACGGGGC+AGG - chr1_3:16377992-16378011 None:intergenic 45.0%
!!! CCATTTTGAGCAGGTGTTGA+TGG - chr1_3:16378037-16378056 None:intergenic 45.0%
CCATCAACACCTGCTCAAAA+TGG + chr1_3:16378034-16378053 Msa0106740:CDS 45.0%
TCAACACCTGCTCAAAATGG+CGG + chr1_3:16378037-16378056 Msa0106740:CDS 45.0%
TGATGATTCAGATTGCCAGG+AGG + chr1_3:16378126-16378145 Msa0106740:CDS 45.0%
GCGAAGATGGCAATTTCGAT+GGG - chr1_3:16378207-16378226 None:intergenic 45.0%
ACAACAGGAGGAGATGAAGA+CGG - chr1_3:16378277-16378296 None:intergenic 45.0%
GTATTCCTACAGGATCGTAC+TGG + chr1_3:16378678-16378697 Msa0106740:intron 45.0%
TTCTACACGACCATCAGACT+TGG + chr1_3:16378909-16378928 Msa0106740:CDS 45.0%
TTGGAGAGTTACATAAGGCC+CGG + chr1_3:16378928-16378947 Msa0106740:CDS 45.0%
ATTGATAGGACAACACAGCC+GGG - chr1_3:16378949-16378968 None:intergenic 45.0%
CTTCAATGTCTTCTGCTGCT+TGG + chr1_3:16378974-16378993 Msa0106740:CDS 45.0%
GATACGCATGTGCAAACCAT+GGG + chr1_3:16379444-16379463 Msa0106740:CDS 45.0%
ATACGCATGTGCAAACCATG+GGG + chr1_3:16379445-16379464 Msa0106740:CDS 45.0%
GGAGACACTGATATCAACTC+TGG - chr1_3:16379484-16379503 None:intergenic 45.0%
GTGTCTCCTTTGGCAATTGT+CGG + chr1_3:16379496-16379515 Msa0106740:CDS 45.0%
GTTATAGGATCAGGAGATCC+TGG + chr1_3:16379701-16379720 Msa0106740:CDS 45.0%
AAACAGCGACCTAGAACACT+AGG - chr1_3:16379779-16379798 None:intergenic 45.0%
! TCTAGGTCGCTGTTTCATTG+AGG + chr1_3:16379784-16379803 Msa0106740:CDS 45.0%
AGCCAATGCATCCATTTGCA+AGG + chr1_3:16379988-16380007 Msa0106740:CDS 45.0%
CTCCTTGCAAATGGATGCAT+TGG - chr1_3:16379993-16380012 None:intergenic 45.0%
GCTTGAGTCTGAATTTGACG+AGG + chr1_3:16380021-16380040 Msa0106740:CDS 45.0%
! GATGTGTGATGCCATTTCAG+AGG + chr1_3:16380051-16380070 Msa0106740:CDS 45.0%
AAAGCCTCATCCCTTGACTT+GGG - chr1_3:16380100-16380119 None:intergenic 45.0%
! AGCTTGGTTGGCTGTTTCAA+AGG + chr1_3:16380134-16380153 Msa0106740:CDS 45.0%
! GCTTGGTTGGCTGTTTCAAA+GGG + chr1_3:16380135-16380154 Msa0106740:CDS 45.0%
! GTTGGCTGTTTCAAAGGGAA+AGG + chr1_3:16380140-16380159 Msa0106740:CDS 45.0%
AAGGTTCTCGAATGTGAACG+AGG + chr1_3:16380159-16380178 Msa0106740:CDS 45.0%
TTCCAGATTATTCGCTCGAC+AGG + chr1_3:16380182-16380201 Msa0106740:CDS 45.0%
AACCTGTCGAGCGAATAATC+TGG - chr1_3:16380187-16380206 None:intergenic 45.0%
CATGTTGGTCAAAACCCTTC+TGG + chr1_3:16380246-16380265 Msa0106740:CDS 45.0%
AAGGAGAAGGGTTGTCAACA+GGG + chr1_3:16380293-16380312 Msa0106740:CDS 45.0%
CGGTATTACTCCCTTGCATT+TGG + chr1_3:16380468-16380487 Msa0106740:CDS 45.0%
GTAGATGCTGCCAAATGCAA+GGG - chr1_3:16380481-16380500 None:intergenic 45.0%
TGTAGATGCTGCCAAATGCA+AGG - chr1_3:16380482-16380501 None:intergenic 45.0%
GCATTTGGCAGCATCTACAA+CGG + chr1_3:16380483-16380502 Msa0106740:CDS 45.0%
! AGCATCTACAACGGATTCTG+AGG + chr1_3:16380492-16380511 Msa0106740:CDS 45.0%
! GCATCTACAACGGATTCTGA+GGG + chr1_3:16380493-16380512 Msa0106740:CDS 45.0%
GGGGAAATATTTACCTCCTG+TGG - chr1_3:16380544-16380563 None:intergenic 45.0%
GTCATGCATGTCAGTCAACA+GGG + chr1_3:16380685-16380704 Msa0106740:intron 45.0%
TCATGCATGTCAGTCAACAG+GGG + chr1_3:16380686-16380705 Msa0106740:intron 45.0%
!! TGTAGATTGGGTTGAAGTGC+TGG + chr1_3:16381207-16381226 Msa0106740:intron 45.0%
!! GTAGATTGGGTTGAAGTGCT+GGG + chr1_3:16381208-16381227 Msa0106740:intron 45.0%
TTAGCTCAATTCCCGGTGAT+GGG - chr1_3:16381379-16381398 None:intergenic 45.0%
ATTAGCTCAATTCCCGGTGA+TGG - chr1_3:16381380-16381399 None:intergenic 45.0%
TGCAATTGCACACTTGGAAC+AGG - chr1_3:16381441-16381460 None:intergenic 45.0%
! CGCGCCAAAAGAAGATTTTC+CGG + chr1_3:16381467-16381486 Msa0106740:CDS 45.0%
GGAGAAACTGAGCCTACATA+AGG - chr1_3:16381584-16381603 None:intergenic 45.0%
AAGCATAAAACCAGGGCGAA+AGG + chr1_3:16381675-16381694 Msa0106740:three_prime_UTR 45.0%
TAACTTGGCAGATCGAGAAG+CGG + chr1_3:16381767-16381786 Msa0106740:three_prime_UTR 45.0%
TGCATATTTCGCTGTGATGC+CGG + chr1_3:16381814-16381833 Msa0106740:three_prime_UTR 45.0%
!!! TTTTTTTTTTTCTTTTTTTT+AGG - chr1_3:16376100-16376119 None:intergenic 5.0%
!! AAAAAAAAAAGTAAAAATTA+TGG + chr1_3:16377068-16377087 Msa0106740:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr1_3:16377165-16377184 Msa0106740:intron 5.0%
!!! TTTTTAGTTTTTTTAATAAT+TGG + chr1_3:16377226-16377245 Msa0106740:intron 5.0%
GTTTGAGGAGAGAGGAGCTA+TGG - chr1_3:16376071-16376090 None:intergenic 50.0%
!! GGTTTGGTGTTTGAGGAGAG+AGG - chr1_3:16376079-16376098 None:intergenic 50.0%
GGATGAAGAGGAAGAAGAGG+AGG - chr1_3:16376246-16376265 None:intergenic 50.0%
GGAGGATGAAGAGGAAGAAG+AGG - chr1_3:16376249-16376268 None:intergenic 50.0%
CCGATGTTGGAGATCCTGAA+CGG - chr1_3:16376509-16376528 None:intergenic 50.0%
CCGTTCAGGATCTCCAACAT+CGG + chr1_3:16376506-16376525 Msa0106740:CDS 50.0%
! CCGTTGGTGGAGTTTGATGA+AGG + chr1_3:16376690-16376709 Msa0106740:CDS 50.0%
AGTTGTAGACGGAGACTTGC+TGG + chr1_3:16376720-16376739 Msa0106740:CDS 50.0%
TTGCTGGTCATAATCGGCGT+CGG + chr1_3:16376736-16376755 Msa0106740:CDS 50.0%
GCAGTAAGATCAGCGGGTAA+AGG - chr1_3:16377863-16377882 None:intergenic 50.0%
ATCCTTAGTTAACGGGGCAG+GGG - chr1_3:16377990-16378009 None:intergenic 50.0%
!! AGCAGGTGTTGATGGAGTTG+TGG - chr1_3:16378029-16378048 None:intergenic 50.0%
GAGGAGCCAAAAAGTTGCAG+CGG - chr1_3:16378169-16378188 None:intergenic 50.0%
!!! TTCGATGGGCTGTCGTTTTC+TGG - chr1_3:16378193-16378212 None:intergenic 50.0%
CGCGAAGATGGCAATTTCGA+TGG - chr1_3:16378208-16378227 None:intergenic 50.0%
GTCTTCATCTCCTCCTGTTG+TGG + chr1_3:16378276-16378295 Msa0106740:CDS 50.0%
GGTCTGCAAGGTGGTATTAG+AGG + chr1_3:16378310-16378329 Msa0106740:CDS 50.0%
! GGTTGGGATTTTGCAAACCC+TGG + chr1_3:16378552-16378571 Msa0106740:intron 50.0%
TTCTCCCAGTACGATCCTGT+AGG - chr1_3:16378686-16378705 None:intergenic 50.0%
AAGCATCCTAGCCATTTCCC+AGG + chr1_3:16378726-16378745 Msa0106740:CDS 50.0%
CACGTCTTTGCATCTGGTGA+AGG - chr1_3:16378844-16378863 None:intergenic 50.0%
TTGCACATGCGTATCCTTCC+TGG - chr1_3:16379439-16379458 None:intergenic 50.0%
GGATACGCATGTGCAAACCA+TGG + chr1_3:16379443-16379462 Msa0106740:CDS 50.0%
TCTCCTTTGGCAATTGTCGG+TGG + chr1_3:16379499-16379518 Msa0106740:CDS 50.0%
TGTCCACCGACAATTGCCAA+AGG - chr1_3:16379505-16379524 None:intergenic 50.0%
TTTGGCAATTGTCGGTGGAC+AGG + chr1_3:16379504-16379523 Msa0106740:CDS 50.0%
AGGATCAGGAGATCCTGGTA+TGG + chr1_3:16379706-16379725 Msa0106740:CDS 50.0%
CGGTCTCAACTCCTTGCAAA+TGG - chr1_3:16380002-16380021 None:intergenic 50.0%
!! ATTTTGGGAGGCCCAAGTCA+AGG + chr1_3:16380086-16380105 Msa0106740:CDS 50.0%
!! TTTTGGGAGGCCCAAGTCAA+GGG + chr1_3:16380087-16380106 Msa0106740:CDS 50.0%
CAAAGCCTCATCCCTTGACT+TGG - chr1_3:16380101-16380120 None:intergenic 50.0%
GAAGGAGAAGGGTTGTCAAC+AGG + chr1_3:16380292-16380311 Msa0106740:CDS 50.0%
GGTCATGCATGTCAGTCAAC+AGG + chr1_3:16380684-16380703 Msa0106740:intron 50.0%
CATGCATGTCAGTCAACAGG+GGG + chr1_3:16380687-16380706 Msa0106740:intron 50.0%
ATGCATGTCAGTCAACAGGG+GGG + chr1_3:16380688-16380707 Msa0106740:intron 50.0%
! CTGCCCGTTTTCATCCACAA+GGG - chr1_3:16381237-16381256 None:intergenic 50.0%
! TCTGCCCGTTTTCATCCACA+AGG - chr1_3:16381238-16381257 None:intergenic 50.0%
CTCATCATGGCATAGGCATG+TGG - chr1_3:16381263-16381282 None:intergenic 50.0%
! TGAGATAGAGCACCCATCAC+CGG + chr1_3:16381364-16381383 Msa0106740:CDS 50.0%
AGTCCCCAACTCGTTTGACT+TGG - chr1_3:16381418-16381437 None:intergenic 50.0%
TTCCGTGGAACCCCTTATGT+AGG + chr1_3:16381569-16381588 Msa0106740:CDS 50.0%
AGCCTACATAAGGGGTTCCA+CGG - chr1_3:16381574-16381593 None:intergenic 50.0%
TAGGCTCAGTTTCTCCCTTC+AGG + chr1_3:16381588-16381607 Msa0106740:CDS 50.0%
CTCAGTTTCTCCCTTCAGGT+GGG + chr1_3:16381592-16381611 Msa0106740:CDS 50.0%
TGAAGTTCATCCTTTCGCCC+TGG - chr1_3:16381688-16381707 None:intergenic 50.0%
GAAAACGCAGCCGGATGAAG+TGG + chr1_3:16376761-16376780 Msa0106740:CDS 55.0%
GCAGCAACCTGATTCAACGG+CGG - chr1_3:16376801-16376820 None:intergenic 55.0%
TCCTTAGTTAACGGGGCAGG+GGG - chr1_3:16377989-16378008 None:intergenic 55.0%
CCTGCTCAAAATGGCGGCAA+CGG + chr1_3:16378043-16378062 Msa0106740:CDS 55.0%
CTGCTCAAAATGGCGGCAAC+GGG + chr1_3:16378044-16378063 Msa0106740:CDS 55.0%
!!! TGGGCTGTCGTTTTCTGGAG+AGG - chr1_3:16378188-16378207 None:intergenic 55.0%
AGCGTTCCTGGGAAATGGCT+AGG - chr1_3:16378735-16378754 None:intergenic 55.0%
TTCGCAGCGTTCCTGGGAAA+TGG - chr1_3:16378740-16378759 None:intergenic 55.0%
TGTGCAAACCATGGGGAACG+TGG + chr1_3:16379452-16379471 Msa0106740:CDS 55.0%
GGAAGAAACCTCTCTGCTCC+TGG + chr1_3:16379547-16379566 Msa0106740:CDS 55.0%
ACTTTGTGCCAGGAGCAGAG+AGG - chr1_3:16379558-16379577 None:intergenic 55.0%
AGGGTTGTCAACAGGGTCAG+TGG + chr1_3:16380300-16380319 Msa0106740:CDS 55.0%
GCAAGGGAGTAATACCGCCA+GGG - chr1_3:16380465-16380484 None:intergenic 55.0%
TGCAAGGGAGTAATACCGCC+AGG - chr1_3:16380466-16380485 None:intergenic 55.0%
CCAAGCCTGTTAGGCACAAG+AGG - chr1_3:16380831-16380850 None:intergenic 55.0%
CCTCTTGTGCCTAACAGGCT+TGG + chr1_3:16380828-16380847 Msa0106740:intron 55.0%
!! GAAGTGCTGGGAAACCCTTG+TGG + chr1_3:16381220-16381239 Msa0106740:CDS 55.0%
! GAGATAGAGCACCCATCACC+GGG + chr1_3:16381365-16381384 Msa0106740:CDS 55.0%
! GATTTTCCGGTTCACGGAGC+TGG + chr1_3:16381480-16381499 Msa0106740:CDS 55.0%
GCTCAGTTTCTCCCTTCAGG+TGG + chr1_3:16381591-16381610 Msa0106740:CDS 55.0%
! CTGGTCATAATCGGCGTCGG+AGG + chr1_3:16376739-16376758 Msa0106740:CDS 60.0%
AACGCAGCCGGATGAAGTGG+CGG + chr1_3:16376764-16376783 Msa0106740:CDS 60.0%
CCTCCAACCGCCACTTCATC+CGG - chr1_3:16376774-16376793 None:intergenic 60.0%
AGGTTCGCCGCCGTTGAATC+AGG + chr1_3:16376791-16376810 Msa0106740:CDS 60.0%
CTTAGTTAACGGGGCAGGGG+GGG - chr1_3:16377987-16378006 None:intergenic 60.0%
CCTTAGTTAACGGGGCAGGG+GGG - chr1_3:16377988-16378007 None:intergenic 60.0%
!! CCGTTGCCGCCATTTTGAGC+AGG - chr1_3:16378046-16378065 None:intergenic 60.0%
GACGGCGACCTTTCATCCAC+AGG - chr1_3:16378259-16378278 None:intergenic 60.0%
CCTGTGTTCGCAGCGTTCCT+GGG - chr1_3:16378746-16378765 None:intergenic 60.0%
ACCTGTGTTCGCAGCGTTCC+TGG - chr1_3:16378747-16378766 None:intergenic 60.0%
GCAAACCATGGGGAACGTGG+AGG + chr1_3:16379455-16379474 Msa0106740:CDS 60.0%
GAGGCCCAAGTCAAGGGATG+AGG + chr1_3:16380093-16380112 Msa0106740:CDS 60.0%
GTGAAGCCAGCTCCGTGAAC+CGG - chr1_3:16381489-16381508 None:intergenic 60.0%
! GGTTCACGGAGCTGGCTTCA+CGG + chr1_3:16381488-16381507 Msa0106740:CDS 60.0%
TCGCTGTGATGCCGGAGTTG+AGG + chr1_3:16381822-16381841 Msa0106740:three_prime_UTR 60.0%
GCGTCGGAGGAAAACGCAGC+CGG + chr1_3:16376752-16376771 Msa0106740:CDS 65.0%
CAGCCGGATGAAGTGGCGGT+TGG + chr1_3:16376768-16376787 Msa0106740:CDS 65.0%
CCGGATGAAGTGGCGGTTGG+AGG + chr1_3:16376771-16376790 Msa0106740:CDS 65.0%
CCCCCCTGCCCCGTTAACTA+AGG + chr1_3:16377985-16378004 Msa0106740:CDS 65.0%
CCCAGGAACGCTGCGAACAC+AGG + chr1_3:16378743-16378762 Msa0106740:CDS 65.0%
GGAGACCTCCACGTTCCCCA+TGG - chr1_3:16379463-16379482 None:intergenic 65.0%
CCAGGGCCCTCAAGATTCGG+TGG - chr1_3:16380448-16380467 None:intergenic 65.0%
CCACCGAATCTTGAGGGCCC+TGG + chr1_3:16380445-16380464 Msa0106740:CDS 65.0%
CCGCCAGGGCCCTCAAGATT+CGG - chr1_3:16380451-16380470 None:intergenic 65.0%
CCGAATCTTGAGGGCCCTGG+CGG + chr1_3:16380448-16380467 Msa0106740:CDS 65.0%
!! GGGGCAGGGGGGGTGTTGTT+TGG - chr1_3:16377977-16377996 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 16375979 16382335 16375979 ID=Msa0106740;Name=Msa0106740
chr1_3 mRNA 16375979 16382335 16375979 ID=Msa0106740-mRNA-1;Parent=Msa0106740;Name=Msa0106740-mRNA-1;_AED=0.03;_eAED=0.03;_QI=249|1|1|1|1|1|9|695|1005
chr1_3 exon 16375979 16376870 16375979 ID=Msa0106740-mRNA-1:exon:6190;Parent=Msa0106740-mRNA-1
chr1_3 exon 16377792 16378552 16377792 ID=Msa0106740-mRNA-1:exon:6191;Parent=Msa0106740-mRNA-1
chr1_3 exon 16378690 16378764 16378690 ID=Msa0106740-mRNA-1:exon:6192;Parent=Msa0106740-mRNA-1
chr1_3 exon 16378895 16379002 16378895 ID=Msa0106740-mRNA-1:exon:6193;Parent=Msa0106740-mRNA-1
chr1_3 exon 16379090 16379207 16379090 ID=Msa0106740-mRNA-1:exon:6194;Parent=Msa0106740-mRNA-1
chr1_3 exon 16379440 16379575 16379440 ID=Msa0106740-mRNA-1:exon:6195;Parent=Msa0106740-mRNA-1
chr1_3 exon 16379661 16379805 16379661 ID=Msa0106740-mRNA-1:exon:6196;Parent=Msa0106740-mRNA-1
chr1_3 exon 16379947 16380549 16379947 ID=Msa0106740-mRNA-1:exon:6197;Parent=Msa0106740-mRNA-1
chr1_3 exon 16381212 16382335 16381212 ID=Msa0106740-mRNA-1:exon:6198;Parent=Msa0106740-mRNA-1
chr1_3 five_prime_UTR 16375979 16376227 16375979 ID=Msa0106740-mRNA-1:five_prime_utr;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16376228 16376870 16376228 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16377792 16378552 16377792 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16378690 16378764 16378690 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16378895 16379002 16378895 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16379090 16379207 16379090 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16379440 16379575 16379440 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16379661 16379805 16379661 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16379947 16380549 16379947 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 CDS 16381212 16381640 16381212 ID=Msa0106740-mRNA-1:cds;Parent=Msa0106740-mRNA-1
chr1_3 three_prime_UTR 16381641 16382335 16381641 ID=Msa0106740-mRNA-1:three_prime_utr;Parent=Msa0106740-mRNA-1
Gene Sequence

>Msa0106740

ATGGAAAAAGTAGCTCCTCCTCTTCTTCCTCTTCATCCTCCTATGTTATCATCACATCAATTTTACGATTCATCAACCACCAAAAAACGTGATCTATTATCATCATACGACGTCGTTCACATCCAAAACGATAATTGGAACCCTAAAGAATGGAATTGGGACAGTATCCATTTCATGACAGCAAAATCAACGACGACAACAGTAGAACCACAACAGACCGAAGAATCTCTAAACTTAAATCTTGGAAGCACGGGACAAGCACGAGCAAACAAACGAATCCGTTCAGGATCTCCAACATCGGCTTCATATCCGATGTGTCAAGTTGATAACTGCAAAGAAGATCTATCAAAAGCGAAGGATTATCATCGACGTCATAAGGTGTGTGAAGCTCATAGTAAAGCTTCTAAGGCTTTGTTAGGGAATCAAATGCAACGGTTTTGTCAACAGTGTAGTAGGTTTCATCCGTTGGTGGAGTTTGATGAAGGAAAACGGAGTTGTAGACGGAGACTTGCTGGTCATAATCGGCGTCGGAGGAAAACGCAGCCGGATGAAGTGGCGGTTGGAGGTTCGCCGCCGTTGAATCAGGTTGCTGCTAATTTGGAGATTTTTAACTTGTTGACTGCTATTGCTGATGGTTCTCAAGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAAAGAACAGCTTGTACAAATTCTGAATAGGATCCCTTTACCCGCTGATCTTACTGCAAAATTGCTGGATGTTGGTAATAATTTGAATGCGAAAAATGATAATGTCCAAATGCAAACTTCACCCTCCTATCATCATCGCGATGATCAACCAAACAACACCCCCCCTGCCCCGTTAACTAAGGATTTTCTTGCTGTTCTTTCCACAACTCCATCAACACCTGCTCAAAATGGCGGCAACGGGTCCACAAGTAGTGCAGATCATATGAGAGAAAGAAGCAGTGGCAGTTCTCAGTCTCCAAATGATGATTCAGATTGCCAGGAGGATGTTCGAGTTAAATTGCCGCTGCAACTTTTTGGCTCCTCTCCAGAAAACGACAGCCCATCGAAATTGCCATCTTCGCGAAAGTATTTTTCATCGGAAAGTAGTAATCCTGTGGATGAAAGGTCGCCGTCTTCATCTCCTCCTGTTGTGGAGATGAATTTTGGTCTGCAAGGTGGTATTAGAGGTCTCAATTCTAATGGTATTTTGACTGGATTTGGAGGCCATGCAAATAAGGAAACTAGCCAAAGTCATAGTTGTACTACTATCCCTCTTGATCTCTTTAAAGGGTCAAAATCAAATAACATGATTCAACAATCTAGTTCAGTTCAAAGTGTACCATTTAAAGCTGGTTATGCATCTTCGGGTTCTGATTATTCACCTCCCAGTTTGAATTCAGATACTCAGGATCGTACTGGGAGAATAATGTTTAAATTGTTTGACAAGCATCCTAGCCATTTCCCAGGAACGCTGCGAACACAGATTTACAATTGGCTTTCTACACGACCATCAGACTTGGAGAGTTACATAAGGCCCGGCTGTGTTGTCCTATCAATTTATGCTTCAATGTCTTCTGCTGCTTGGGTGCAATTAGAAGAAAACTTCGTCCAACGTGTTGATTCTTTAATTCATAACTCAGATTCTGATTTCTGGAGAAATGGAAGATTTCTTGTTTATTCTGGCAGTCAGTTAGCATCACACAAAGATGGAAGGATACGCATGTGCAAACCATGGGGAACGTGGAGGTCTCCAGAGTTGATATCAGTGTCTCCTTTGGCAATTGTCGGTGGACAGGAGACTTCTATTTCATTGAAGGGAAGAAACCTCTCTGCTCCTGGCACAAAGATTCATTGCACTGATGCTGACTGTTATACATCATCAGAAGTTATAGGATCAGGAGATCCTGGTATGGTCTATGATGAGATAAAATTGAGTGGTTTTGAAGTTCAGAATACATCTCCTAGTGTTCTAGGTCGCTGTTTCATTGAGGTTGAAAATGGTTTCAAGGGAAACAGTTTTCCAGTGATAATAGCCAATGCATCCATTTGCAAGGAGTTGAGACCGCTTGAGTCTGAATTTGACGAGGATGAAAAGATGTGTGATGCCATTTCAGAGGAGCATGAACATAATTTTGGGAGGCCCAAGTCAAGGGATGAGGCTTTGCACTTTTTGAATGAGCTTGGTTGGCTGTTTCAAAGGGAAAGGTTCTCGAATGTGAACGAGGTTCCAGATTATTCGCTCGACAGGTTCAAATTTGTACTGACGTTTTCTGTGGAAAGAAACTGTTGCATGTTGGTCAAAACCCTTCTGGATATACTGGTTGATAAACACTTCGAAGGAGAAGGGTTGTCAACAGGGTCAGTGGAGATGCTGAAAGCAATCCAACTTCTAAATAGAGCAGTGAAAAGAAAGTGCACAAGCATGGTTGATTTGCTCATTAACTATTCTATAACTAGCAAAAATGACACATCCAAGAAATATGTATTTCCACCGAATCTTGAGGGCCCTGGCGGTATTACTCCCTTGCATTTGGCAGCATCTACAACGGATTCTGAGGGTGTAATTGACTCTTTAACAAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGAAACCCTTGTGGATGAAAACGGGCAGACTCCACATGCCTATGCCATGATGAGAAATAATCACTCTTATAATATGTTGGTTGCCCGTAAACGTTCCGATAGACAAAGAAGTGAAGTTTCAGTTAGAATTGATAATGAGATAGAGCACCCATCACCGGGAATTGAGCTAATGCAAAAGCGAATTAACCAAGTCAAACGAGTTGGGGACTCCTGTTCCAAGTGTGCAATTGCAGAAGTTCGCGCCAAAAGAAGATTTTCCGGTTCACGGAGCTGGCTTCACGGTCCCTTTATTCATTCGATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTATTCCGTGGAACCCCTTATGTAGGCTCAGTTTCTCCCTTCAGGTGGGAAAACTTGAATTATGGCACAATGTAA
Protein sequence

>Msa0106740

MEKVAPPLLPLHPPMLSSHQFYDSSTTKKRDLLSSYDVVHIQNDNWNPKEWNWDSIHFMTAKSTTTTVEPQQTEESLNLNLGSTGQARANKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGHNRRRRKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQVPDKEQLVQILNRIPLPADLTAKLLDVGNNLNAKNDNVQMQTSPSYHHRDDQPNNTPPAPLTKDFLAVLSTTPSTPAQNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLPSSRKYFSSESSNPVDERSPSSSPPVVEMNFGLQGGIRGLNSNGILTGFGGHANKETSQSHSCTTIPLDLFKGSKSNNMIQQSSSVQSVPFKAGYASSGSDYSPPSLNSDTQDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSTRPSDLESYIRPGCVVLSIYASMSSAAWVQLEENFVQRVDSLIHNSDSDFWRNGRFLVYSGSQLASHKDGRIRMCKPWGTWRSPELISVSPLAIVGGQETSISLKGRNLSAPGTKIHCTDADCYTSSEVIGSGDPGMVYDEIKLSGFEVQNTSPSVLGRCFIEVENGFKGNSFPVIIANASICKELRPLESEFDEDEKMCDAISEEHEHNFGRPKSRDEALHFLNELGWLFQRERFSNVNEVPDYSLDRFKFVLTFSVERNCCMLVKTLLDILVDKHFEGEGLSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPLHLAASTTDSEGVIDSLTNDPQEIGLKCWETLVDENGQTPHAYAMMRNNHSYNMLVARKRSDRQRSEVSVRIDNEIEHPSPGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWLHGPFIHSMLAVAAVCVCVCVLFRGTPYVGSVSPFRWENLNYGTM*