AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0306550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306550 MtrunA17_Chr1g0162871 97.117 1006 26 1 1 1006 1 1003 0.0 2026
Msa0306550 MtrunA17_Chr7g0270541 33.612 598 356 13 437 1005 415 1000 1.44e-92 317
Msa0306550 MtrunA17_Chr7g0270541 62.698 126 44 1 77 199 112 237 3.73e-40 161
Msa0306550 MtrunA17_Chr1g0194121 33.333 594 361 12 439 1005 417 1002 1.36e-87 303
Msa0306550 MtrunA17_Chr1g0194121 62.069 116 43 1 77 192 117 231 1.91e-36 149
Msa0306550 MtrunA17_Chr2g0302791 31.624 585 335 18 467 1006 461 1025 3.72e-82 288
Msa0306550 MtrunA17_Chr2g0302791 54.930 142 58 1 77 212 103 244 1.97e-41 165
Msa0306550 MtrunA17_Chr8g0360361 64.130 92 33 0 105 196 63 154 2.37e-32 124
Msa0306550 MtrunA17_Chr8g0386271 67.901 81 26 0 107 187 99 179 2.46e-32 130
Msa0306550 MtrunA17_Chr8g0334671 56.034 116 40 1 78 182 147 262 8.52e-32 127
Msa0306550 MtrunA17_Chr2g0282521 65.909 88 29 1 95 181 51 138 9.30e-32 121
Msa0306550 MtrunA17_Chr4g0046991 68.750 80 25 0 105 184 71 150 2.00e-31 120
Msa0306550 MtrunA17_Chr2g0308321 64.835 91 31 1 92 182 157 246 7.46e-31 128
Msa0306550 MtrunA17_Chr5g0420051 63.441 93 33 1 92 184 167 258 3.26e-30 125
Msa0306550 MtrunA17_Chr3g0132091 42.857 154 82 2 90 237 56 209 6.47e-30 122
Msa0306550 MtrunA17_Chr7g0224821 41.026 156 71 3 45 183 2 153 6.79e-30 122
Msa0306550 MtrunA17_Chr7g0258471 59.783 92 37 0 95 186 130 221 4.90e-29 120
Msa0306550 MtrunA17_Chr7g0231911 66.667 81 27 0 107 187 149 229 6.63e-29 118
Msa0306550 MtrunA17_Chr4g0061651 59.596 99 36 1 92 190 112 206 1.16e-28 120
Msa0306550 MtrunA17_Chr3g0122411 58.621 87 36 0 105 191 163 249 7.27e-28 117
Msa0306550 MtrunA17_Chr2g0286661 26.301 346 213 9 452 774 272 598 2.81e-25 112
Msa0306550 MtrunA17_Chr2g0286661 48.936 94 47 1 107 200 103 195 5.03e-21 99.4
Msa0306550 MtrunA17_Chr8g0377421 42.857 112 64 0 69 180 94 205 6.12e-23 100
Msa0306550 MtrunA17_Chr8g0377401 44.643 112 56 1 74 179 123 234 3.81e-22 97.1
Msa0306550 MtrunA17_Chr2g0317041 62.745 51 19 0 103 153 95 145 6.43e-16 76.3
Msa0306550 MtrunA17_Chr8g0377431 33.654 104 68 1 59 162 104 206 1.83e-13 70.5
Msa0306550 MtrunA17_Chr1g0175031 59.184 49 20 0 105 153 72 120 4.12e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0306550 AT1G20980.1 49.105 1061 437 25 16 1006 8 1035 0.0 879
Msa0306550 AT1G76580.1 47.290 1070 442 26 3 1006 7 1020 0.0 847
Msa0306550 AT1G76580.2 45.742 728 289 21 3 665 7 693 1.52e-173 523
Msa0306550 AT1G76580.3 45.730 726 288 21 3 663 7 691 2.64e-172 520
Msa0306550 AT2G47070.2 33.394 554 321 13 469 1005 229 751 1.14e-85 292
Msa0306550 AT2G47070.2 58.025 81 32 1 132 212 2 80 2.03e-20 97.8
Msa0306550 AT3G60030.1 35.179 560 310 17 468 1005 398 926 6.25e-85 294
Msa0306550 AT3G60030.1 56.934 137 55 3 78 212 97 231 6.96e-38 154
Msa0306550 AT2G47070.1 33.394 554 321 13 469 1005 358 880 1.35e-84 292
Msa0306550 AT2G47070.1 41.951 205 81 4 36 212 15 209 2.93e-37 152
Msa0306550 AT1G53160.3 63.333 90 33 0 102 191 49 138 2.11e-31 121
Msa0306550 AT1G53160.2 63.333 90 33 0 102 191 49 138 2.54e-31 121
Msa0306550 AT1G53160.1 63.333 90 33 0 102 191 49 138 2.54e-31 121
Msa0306550 AT2G33810.1 63.636 88 31 1 97 184 45 131 4.69e-31 119
Msa0306550 AT3G15270.1 58.163 98 41 0 92 189 48 145 7.33e-31 120
Msa0306550 AT1G69170.1 71.053 76 22 0 105 180 122 197 1.81e-30 125
Msa0306550 AT5G50570.1 61.446 83 32 0 105 187 99 181 2.12e-30 124
Msa0306550 AT5G50570.2 61.446 83 32 0 105 187 99 181 2.12e-30 124
Msa0306550 AT5G50670.1 61.446 83 32 0 105 187 99 181 2.12e-30 124
Msa0306550 AT5G50670.2 61.446 83 32 0 105 187 99 181 2.12e-30 124
Msa0306550 AT1G02065.1 63.441 93 34 0 96 188 177 269 2.32e-30 123
Msa0306550 AT1G27370.6 42.945 163 62 3 56 195 103 257 1.16e-28 119
Msa0306550 AT1G27370.1 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT1G27370.5 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT1G27370.3 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT1G27370.2 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT1G27370.4 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT1G27370.7 42.945 163 62 3 56 195 103 257 1.71e-28 119
Msa0306550 AT5G18830.1 30.837 227 153 2 472 694 320 546 4.78e-28 122
Msa0306550 AT5G18830.1 43.810 105 55 1 86 190 121 221 6.29e-21 99.4
Msa0306550 AT5G18830.2 30.837 227 153 2 472 694 320 546 5.32e-28 122
Msa0306550 AT5G18830.2 46.465 99 49 1 92 190 127 221 5.80e-21 99.4
Msa0306550 AT5G18830.3 30.837 227 153 2 472 694 320 546 5.42e-28 122
Msa0306550 AT5G18830.3 43.810 105 55 1 86 190 121 221 5.86e-21 99.8
Msa0306550 AT2G42200.1 56.436 101 43 1 89 188 55 155 5.72e-28 117
Msa0306550 AT5G43270.3 50.000 120 53 2 99 218 161 273 1.56e-27 117
Msa0306550 AT5G43270.1 50.000 120 53 2 99 218 161 273 1.56e-27 117
Msa0306550 AT5G43270.2 50.000 120 53 2 99 218 161 273 1.56e-27 117
Msa0306550 AT1G27360.2 44.667 150 58 2 56 182 103 250 6.84e-27 114
Msa0306550 AT1G27360.1 44.667 150 58 2 56 182 103 250 6.84e-27 114
Msa0306550 AT1G27360.3 44.667 150 58 2 56 182 103 250 6.84e-27 114
Msa0306550 AT1G27360.4 44.667 150 58 2 56 182 103 250 6.84e-27 114
Msa0306550 AT3G57920.1 57.426 101 38 2 83 183 40 135 1.10e-26 113
Msa0306550 AT1G02065.2 54.667 75 32 1 89 161 170 244 6.68e-17 82.0

Find 292 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGCATGAACATAATTT+TGG 0.128013 2_3:+65401863 Msa0306550:CDS
GAACATATTAGAGGTTAATT+TGG 0.170190 2_3:+65403531 Msa0306550:three_prime_UTR
ATCCCTCTTGATCTCTTTAA+AGG 0.178781 2_3:+65400205 Msa0306550:CDS
GTTGATGCAGTCAAATAATT+TGG 0.183156 2_3:+65403788 Msa0306550:three_prime_UTR
GAATCAGGTTGCTGCTAATT+TGG 0.209506 2_3:+65398581 Msa0306550:CDS
ATAACTCAGATTCTGATTTC+TGG 0.211467 2_3:+65400923 Msa0306550:CDS
CTGTCCCAATTCCATTCTTT+AGG 0.213368 2_3:-65398141 None:intergenic
ACCTGTGTTCGCAGCGTTCC+TGG 0.222112 2_3:-65400537 None:intergenic
TTCACATCCAAAACGATAAT+TGG 0.245892 2_3:+65398115 Msa0306550:CDS
GGAAGATTTCTTGTTTATTC+TGG 0.246345 2_3:+65400952 Msa0306550:CDS
TGTACAAGCTGTTCTTTATC+TGG 0.254859 2_3:-65399614 None:intergenic
CGGTGGAAATACATATTTCT+TGG 0.254936 2_3:-65402221 None:intergenic
AAAGCTTCTAAGGCTTTGTT+AGG 0.256564 2_3:+65398399 Msa0306550:CDS
TGTCCCAATTCCATTCTTTA+GGG 0.268922 2_3:-65398140 None:intergenic
TATTTGAGGATATTGATAAT+AGG 0.270325 2_3:+65403911 Msa0306550:three_prime_UTR
CCTGTTGTGGAGATGAATTT+TGG 0.281003 2_3:+65400082 Msa0306550:CDS
TTGTCTATCGGAACGTTTAC+GGG 0.284257 2_3:-65403105 None:intergenic
AGGATAAGTTACACCTGAAT+TGG 0.296441 2_3:+65403634 Msa0306550:three_prime_UTR
TAGGGTTCCAATTATCGTTT+TGG 0.300009 2_3:-65398122 None:intergenic
AAAATTTCAACACCCAATTC+AGG 0.301987 2_3:-65403647 None:intergenic
CAAAGACATGTAAGGCTATA+AGG 0.302565 2_3:-65397959 None:intergenic
AGGTTCGCCGCCGTTGAATC+AGG 0.312918 2_3:+65398566 Msa0306550:CDS
AGGTGGGAAAACTTGAATTA+TGG 0.313613 2_3:+65403401 Msa0306550:CDS
TTTGTCTATCGGAACGTTTA+CGG 0.314407 2_3:-65403106 None:intergenic
GATGCATAACCAGCTTTAAA+TGG 0.316842 2_3:-65400277 None:intergenic
TAGGCTCAGTTTCTCCCTTC+AGG 0.321487 2_3:+65403381 Msa0306550:CDS
AATACATCTCCTAGTGTTCT+AGG 0.322030 2_3:+65401560 Msa0306550:CDS
GTTTGTGAACAGGTTGAAAA+TGG 0.322272 2_3:+65401728 Msa0306550:intron
GGAACCCTAAAGAATGGAAT+TGG 0.322561 2_3:+65398136 Msa0306550:CDS
GAACATGTCCTCACAATATA+AGG 0.324494 2_3:+65403706 Msa0306550:three_prime_UTR
TTCAATGTCTTCTGCTGCTT+GGG 0.324534 2_3:+65400768 Msa0306550:CDS
CATGTTGGTCAAAACCCTTC+TGG 0.329211 2_3:+65402039 Msa0306550:CDS
AGCTAGCATCGAATGAATAA+AGG 0.329929 2_3:-65403306 None:intergenic
CTGAGTATCTGAATTCAAAC+TGG 0.331636 2_3:-65400323 None:intergenic
CCATCAACACCTGCTCAAAA+TGG 0.333813 2_3:+65399827 Msa0306550:CDS
ATTTGGAGGCCATGCAAATA+AGG 0.340733 2_3:+65400153 Msa0306550:CDS
ATTTGAGGATATTGATAATA+GGG 0.344391 2_3:+65403912 Msa0306550:three_prime_UTR
TAAAGCTGGTTATGCATCTT+CGG 0.346795 2_3:+65400282 Msa0306550:CDS
AAAGCTGGTTATGCATCTTC+GGG 0.352663 2_3:+65400283 Msa0306550:CDS
AGGGTATGAGACTAAGAATA+AGG 0.358431 2_3:-65397934 None:intergenic
AACTTCTGCAATTGCACACT+TGG 0.359955 2_3:-65403237 None:intergenic
CTTCAATGTCTTCTGCTGCT+TGG 0.362113 2_3:+65400767 Msa0306550:CDS
TATACATCATCAGAAGTTAT+AGG 0.371060 2_3:+65401479 Msa0306550:CDS
GATTCTGATTTCTGGAGAAA+TGG 0.374701 2_3:+65400931 Msa0306550:CDS
CACTTTGTAATCATATAGTA+TGG 0.374848 2_3:-65403940 None:intergenic
AGCTCATAGTAAAGCTTCTA+AGG 0.376735 2_3:+65398389 Msa0306550:CDS
CAAGAAAATCCTTAGTTAAC+GGG 0.380419 2_3:-65399787 None:intergenic
TGCAATTGCACACTTGGAAC+AGG 0.381293 2_3:-65403231 None:intergenic
GGTCTGCAAGGTAGTATTAG+AGG 0.381686 2_3:+65400103 Msa0306550:CDS
TCCTTAGTTAACGGGGCAGG+GGG 0.382520 2_3:-65399779 None:intergenic
CGGTATTACTCCCTTGCATT+TGG 0.384111 2_3:+65402261 Msa0306550:CDS
TGTAGATTGGGTTGAAGTGC+TGG 0.386202 2_3:+65403000 Msa0306550:intron
AGGAGGGTGAAGTTTGCATT+TGG 0.388943 2_3:-65399724 None:intergenic
AACAACAGTAGAACCACAAC+AGG 0.394660 2_3:+65398197 Msa0306550:CDS
TGAACCGGAAAATCTTCTTT+TGG 0.396112 2_3:-65403264 None:intergenic
GAAGGAGAAGGGTTGTCAAC+AGG 0.403420 2_3:+65402085 Msa0306550:CDS
TCCCTCTTGATCTCTTTAAA+GGG 0.403698 2_3:+65400206 Msa0306550:CDS
TGGCAATCTGAATCATCATT+TGG 0.407162 2_3:-65399914 None:intergenic
GGCTAGTTTCCTTATTTGCA+TGG 0.408999 2_3:-65400162 None:intergenic
ATCCTTAGTTAACGGGGCAG+GGG 0.412793 2_3:-65399780 None:intergenic
TTGTGAGGACATGTTCTATC+TGG 0.415552 2_3:-65403699 None:intergenic
CTTAGTTAACGGGGCAGGGG+GGG 0.416027 2_3:-65399777 None:intergenic
GGAGACTTCTATTTCATTGA+AGG 0.416715 2_3:+65401318 Msa0306550:CDS
CCAAAATTCATCTCCACAAC+AGG 0.417568 2_3:-65400082 None:intergenic
ATTTAAGTTTAGAGATTCTT+CGG 0.419499 2_3:-65398220 None:intergenic
CTGCTCAAAATGGCGGCAAC+GGG 0.422761 2_3:+65399837 Msa0306550:CDS
CGCGAAGATGGCAATTTCGA+TGG 0.423095 2_3:-65399998 None:intergenic
GAAACCCTTGTGGATGAAAA+CGG 0.423968 2_3:+65403023 Msa0306550:CDS
CAGTAAGATCAGCGGGTAAA+GGG 0.424392 2_3:-65399652 None:intergenic
GGATTATCATCGACGTCATA+AGG 0.425815 2_3:+65398359 Msa0306550:CDS
GTTTGAGGAGAGAGGAGCTA+TGG 0.427610 2_3:-65397839 None:intergenic
GAATCTCTAAACTTAAATCT+TGG 0.427805 2_3:+65398225 Msa0306550:CDS
ATTAGCTCAATTCCCGGTGA+TGG 0.428300 2_3:-65403170 None:intergenic
GTTGATATCAGTGTCTCCTT+TGG 0.429670 2_3:+65401279 Msa0306550:CDS
TTAACCAAGTCAAACGAGTT+GGG 0.434205 2_3:+65403204 Msa0306550:CDS
ATTAGAGGTCTCAATTCTAA+TGG 0.436493 2_3:+65400118 Msa0306550:CDS
CTCCTTGCAAATGGATGCAT+TGG 0.437114 2_3:-65401783 None:intergenic
CAAAGCCTCATCCCTTGACT+TGG 0.437901 2_3:-65401891 None:intergenic
TTCGCAGCGTTCCTGGGAAA+TGG 0.438881 2_3:-65400530 None:intergenic
TGATCTTACTGCAAAATTGC+TGG 0.439137 2_3:+65399664 Msa0306550:CDS
CGGTCTCAACTCCTTGCAAA+TGG 0.440421 2_3:-65401792 None:intergenic
GTGTCTCCTTTGGCAATTGT+CGG 0.441124 2_3:+65401289 Msa0306550:CDS
ATGTTCATGCTCCTCTGAAA+TGG 0.441547 2_3:-65401855 None:intergenic
GCAAACAAACGAATCCGTTC+AGG 0.441823 2_3:+65398267 Msa0306550:CDS
AAATCCTTAGTTAACGGGGC+AGG 0.442282 2_3:-65399782 None:intergenic
CCGGATGAAGTGGCGGTTGG+AGG 0.443148 2_3:+65398546 Msa0306550:CDS
TCACTGCTCTATTTAGAAGT+TGG 0.443446 2_3:-65402132 None:intergenic
GTGAAGCCAGCTCCGTGAAC+CGG 0.444837 2_3:-65403279 None:intergenic
TTCCAGATTATTCGCTCGAC+AGG 0.447389 2_3:+65401975 Msa0306550:CDS
CCACCGAATCTTGAGGGCCC+TGG 0.449842 2_3:+65402238 Msa0306550:CDS
TTGATCATCGCGATGATGAT+AGG 0.450695 2_3:-65399744 None:intergenic
CCTCCAACCGCCACTTCATC+CGG 0.453273 2_3:-65398546 None:intergenic
ACATGTAAGGCTATAAGGTA+AGG 0.456073 2_3:-65397954 None:intergenic
GGAGAAACTGAGCCTACATA+AGG 0.457144 2_3:-65403374 None:intergenic
TCATCAGAAGTTATAGGATC+AGG 0.457883 2_3:+65401485 Msa0306550:CDS
GCAGTAAGATCAGCGGGTAA+AGG 0.460954 2_3:-65399653 None:intergenic
CCTGTGTTCGCAGCGTTCCT+GGG 0.462026 2_3:-65400536 None:intergenic
GGAGACTTGCTGGTCATAAT+CGG 0.463432 2_3:+65398505 Msa0306550:CDS
GGTTCACGGAGCTGGCTTCA+CGG 0.463735 2_3:+65403281 Msa0306550:CDS
AATCCTTAGTTAACGGGGCA+GGG 0.464494 2_3:-65399781 None:intergenic
TTTGGCAATTGTCGGTGGAC+AGG 0.466662 2_3:+65401297 Msa0306550:CDS
TTCAGATCTAAAGTAACATA+AGG 0.467081 2_3:-65397788 None:intergenic
ACAGGTTGAAAATGGTTTCA+AGG 0.467248 2_3:+65401736 Msa0306550:intron
AGTTGTAGACGGAGACTTGC+TGG 0.469042 2_3:+65398495 Msa0306550:CDS
GTTACTGTAAAGTTTATTTG+AGG 0.470689 2_3:+65403897 Msa0306550:three_prime_UTR
GCAAGAAAATCCTTAGTTAA+CGG 0.472350 2_3:-65399788 None:intergenic
GATGCATTGGCTATTATCAC+TGG 0.472801 2_3:-65401770 None:intergenic
AGCTTGGTTGGCTGTTTCAA+AGG 0.474571 2_3:+65401927 Msa0306550:CDS
TTTGAGGAGAGAGGAGCTAT+GGG 0.474977 2_3:-65397838 None:intergenic
CCGCCAGGGCCCTCAAGATT+CGG 0.474979 2_3:-65402241 None:intergenic
CAAAGTGCACCATTTAAAGC+TGG 0.476563 2_3:+65400268 Msa0306550:CDS
CAGTTTCTCTTTATTCCCAA+TGG 0.477654 2_3:-65403753 None:intergenic
GGATAAGTTACACCTGAATT+GGG 0.478434 2_3:+65403635 Msa0306550:three_prime_UTR
AGAGTGATTATTTCTCATCA+TGG 0.481408 2_3:-65403066 None:intergenic
ACATTGAAGCATAAATTGAT+AGG 0.482024 2_3:-65400753 None:intergenic
AACTTCACTTCTTTGTCTAT+CGG 0.482737 2_3:-65403117 None:intergenic
TAATCACTCTTATAATATGT+TGG 0.482765 2_3:+65403079 Msa0306550:CDS
GGTTTGGTGTTTGAGGAGAG+AGG 0.483762 2_3:-65397847 None:intergenic
GAGAAACTGAGCCTACATAA+GGG 0.484362 2_3:-65403373 None:intergenic
TAGGAAAATTTGAGGAAAGA+AGG 0.485472 2_3:+65399582 Msa0306550:intron
ATAATTGGAACCCTAAAGAA+TGG 0.487578 2_3:+65398130 Msa0306550:CDS
GCTAGCATCGAATGAATAAA+GGG 0.487739 2_3:-65403305 None:intergenic
CAGGTTGAAAATGGTTTCAA+GGG 0.489945 2_3:+65401737 Msa0306550:intron
GGAGGATGAAGAGGAAGAAG+AGG 0.490372 2_3:-65398018 None:intergenic
CCTGCTCAAAATGGCGGCAA+CGG 0.490644 2_3:+65399836 Msa0306550:CDS
GTCTTCATCTCCTCCTGTTG+TGG 0.490783 2_3:+65400069 Msa0306550:CDS
GGAATAAAGAGAAACTGAGT+TGG 0.491956 2_3:+65403759 Msa0306550:three_prime_UTR
GCTATTGCTGATGGTTCTCA+AGG 0.494096 2_3:+65398624 Msa0306550:CDS
TAGTAGTACAACTATGACTT+TGG 0.494147 2_3:-65400183 None:intergenic
AAATGATGATTCAGATTGCC+AGG 0.494257 2_3:+65399916 Msa0306550:CDS
AACCTGTCGAGCGAATAATC+TGG 0.495792 2_3:-65401977 None:intergenic
GTTAATTTGGAGCTATAACT+TGG 0.496020 2_3:+65403544 Msa0306550:three_prime_UTR
GTATTCCTACAGGATCGTAC+TGG 0.496322 2_3:+65400471 Msa0306550:intron
CAGTTTGAATTCAGATACTC+AGG 0.496563 2_3:+65400324 Msa0306550:CDS
TTGTTGACTGCTATTGCTGA+TGG 0.498169 2_3:+65398615 Msa0306550:CDS
TGCAAGGGAGTAATACCGCC+AGG 0.498402 2_3:-65402256 None:intergenic
GGGTATGAGACTAAGAATAA+GGG 0.498497 2_3:-65397933 None:intergenic
AACTTAAATCTTGGAAGCAC+GGG 0.499006 2_3:+65398234 Msa0306550:CDS
ATCAGTACTAACTTTGTGCC+AGG 0.499084 2_3:-65401358 None:intergenic
GAACCCTAAAGAATGGAATT+GGG 0.499304 2_3:+65398137 Msa0306550:CDS
CAAAACCCTTCTGGATAAGC+TGG 0.499747 2_3:+65402048 Msa0306550:CDS
TGGAGTTTGATGAAGGAAAA+CGG 0.499920 2_3:+65398472 Msa0306550:CDS
CCTTAGTTAACGGGGCAGGG+GGG 0.499978 2_3:-65399778 None:intergenic
GTTATAGGATCAGGAGATCC+TGG 0.500739 2_3:+65401494 Msa0306550:CDS
GTATTTCCACCGAATCTTGA+GGG 0.500756 2_3:+65402232 Msa0306550:CDS
GATAAACACTTCGAAGGAGA+AGG 0.501550 2_3:+65402073 Msa0306550:CDS
GGAAGAAACCTCTCTGCTCC+TGG 0.503311 2_3:+65401340 Msa0306550:CDS
TTTGAGGATATTGATAATAG+GGG 0.503790 2_3:+65403913 Msa0306550:three_prime_UTR
TGCATATTTCGCTGTGATGC+CGG 0.504256 2_3:+65403606 Msa0306550:three_prime_UTR
TGTTGGTGAATGAAAACTAA+AGG 0.508023 2_3:+65403437 Msa0306550:three_prime_UTR
AAACCCTTGTGGATGAAAAC+GGG 0.509681 2_3:+65403024 Msa0306550:CDS
TTATGAGAGCAGTAAGCCAT+TGG 0.510367 2_3:+65403737 Msa0306550:three_prime_UTR
ATTTAACTCGAACATCCTCC+TGG 0.512376 2_3:-65399934 None:intergenic
GGATGAAGAGGAAGAAGAGG+AGG 0.513974 2_3:-65398015 None:intergenic
GCTTGGTTGGCTGTTTCAAA+GGG 0.514045 2_3:+65401928 Msa0306550:CDS
TTCTACACGACCATCAGACT+TGG 0.514057 2_3:+65400702 Msa0306550:CDS
AGCTTGTACAAATTCTGAAT+AGG 0.515245 2_3:+65399627 Msa0306550:CDS
GACGGCGACCTTTCATCCAC+AGG 0.515983 2_3:-65400049 None:intergenic
AGCAGGTGTTGATGGAGTTG+TGG 0.516270 2_3:-65399819 None:intergenic
GAATAAAGAGAAACTGAGTT+GGG 0.517489 2_3:+65403760 Msa0306550:three_prime_UTR
TGAGATAGAGCACCCATCAC+CGG 0.517584 2_3:+65403157 Msa0306550:CDS
ATTATTTCTCATCATGGCAT+AGG 0.518702 2_3:-65403060 None:intergenic
CCGTTGGTGGAGTTTGATGA+AGG 0.518926 2_3:+65398465 Msa0306550:CDS
CTCTTTAACAAATGATCCAC+AGG 0.520008 2_3:+65402318 Msa0306550:CDS
GTTGGCTGTTTCAAAGGGAA+AGG 0.520420 2_3:+65401933 Msa0306550:CDS
ATATTGTATAGGAAAATTTG+AGG 0.522913 2_3:+65399574 Msa0306550:intron
GCGAAGATGGCAATTTCGAT+GGG 0.523216 2_3:-65399997 None:intergenic
TATGGGAAATTCATGTGAAA+GGG 0.524245 2_3:-65397821 None:intergenic
ATCGGATATGAAGCCGATGT+TGG 0.526336 2_3:-65398294 None:intergenic
AATTGATAGGACAACACAGC+CGG 0.530262 2_3:-65400740 None:intergenic
GCTCAGTTTCTCCCTTCAGG+TGG 0.530619 2_3:+65403384 Msa0306550:CDS
AGCATCTACAACGGATTCTG+AGG 0.530622 2_3:+65402285 Msa0306550:CDS
AGTCCCCAACTCGTTTGACT+TGG 0.531710 2_3:-65403208 None:intergenic
TAATTAATCAAAGACATGTA+AGG 0.532137 2_3:-65397967 None:intergenic
GAAAACGCAGCCGGATGAAG+TGG 0.533996 2_3:+65398536 Msa0306550:CDS
AGAGATTCTTCGGCCTGTTG+TGG 0.535309 2_3:-65398210 None:intergenic
AAGCTTCTAAGGCTTTGTTA+GGG 0.535780 2_3:+65398400 Msa0306550:CDS
CATATGATCTGCACTACTTG+TGG 0.536193 2_3:-65399861 None:intergenic
CAGCCGGATGAAGTGGCGGT+TGG 0.536524 2_3:+65398543 Msa0306550:CDS
TCGCTGTGATGCCGGAGTTG+AGG 0.536969 2_3:+65403614 Msa0306550:three_prime_UTR
TCTAGGTCGCTGTTTCATTG+AGG 0.538184 2_3:+65401577 Msa0306550:CDS
CCTTCATCAAACTCCACCAA+CGG 0.538649 2_3:-65398465 None:intergenic
TATGAGAGCAGTAAGCCATT+GGG 0.540765 2_3:+65403738 Msa0306550:three_prime_UTR
GCGTCGGAGGAAAACGCAGC+CGG 0.543520 2_3:+65398527 Msa0306550:CDS
GAGATAGAGCACCCATCACC+GGG 0.544324 2_3:+65403158 Msa0306550:CDS
TTAGCTCAATTCCCGGTGAT+GGG 0.545019 2_3:-65403169 None:intergenic
ACTGCAAAATTGCTGGATGT+TGG 0.546561 2_3:+65399671 Msa0306550:CDS
GATACGCATGTGCAAACCAT+GGG 0.547058 2_3:+65401237 Msa0306550:CDS
TATCAACCAGCTTATCCAGA+AGG 0.547265 2_3:-65402054 None:intergenic
GTGTAGTAGGTTTCATCCGT+TGG 0.548903 2_3:+65398449 Msa0306550:CDS
CTGGTCATAATCGGCGTCGG+AGG 0.551550 2_3:+65398514 Msa0306550:CDS
ATCTCATCATAGACCATACC+AGG 0.551607 2_3:-65401512 None:intergenic
ATTAACCAAGTCAAACGAGT+TGG 0.553160 2_3:+65403203 Msa0306550:CDS
GTAGTAATCCTGTGGATGAA+AGG 0.553754 2_3:+65400041 Msa0306550:CDS
TCTCCTTTGGCAATTGTCGG+TGG 0.554427 2_3:+65401292 Msa0306550:CDS
AAAGCCTCATCCCTTGACTT+GGG 0.557399 2_3:-65401890 None:intergenic
TGTATTTCCACCGAATCTTG+AGG 0.558800 2_3:+65402231 Msa0306550:CDS
GACCCTTTAAAGAGATCAAG+AGG 0.558852 2_3:-65400208 None:intergenic
ATGATGCATAGTTCTATAGC+AGG 0.559123 2_3:-65403855 None:intergenic
GGGGAAATATTTACCTCCTG+TGG 0.559338 2_3:-65402334 None:intergenic
TTCCGTGGAACCCCTTATGT+AGG 0.560906 2_3:+65403362 Msa0306550:CDS
CAGACTTGGAGAGTTACATA+AGG 0.560965 2_3:+65400716 Msa0306550:CDS
TGAAGTTCATCCTTTCGCCC+TGG 0.561681 2_3:-65403477 None:intergenic
CTATGGGAAATTCATGTGAA+AGG 0.564858 2_3:-65397822 None:intergenic
GGAGACCTCCACGTTCCCCA+TGG 0.566104 2_3:-65401253 None:intergenic
ATCAACCAGCTTATCCAGAA+GGG 0.566251 2_3:-65402053 None:intergenic
AAACTTAAATCTTGGAAGCA+CGG 0.566490 2_3:+65398233 Msa0306550:CDS
CCCAGGAACGCTGCGAACAC+AGG 0.566597 2_3:+65400536 Msa0306550:CDS
TTGGAGAGTTACATAAGGCC+CGG 0.568740 2_3:+65400721 Msa0306550:CDS
AAGCATAAAACCAGGGCGAA+AGG 0.569920 2_3:+65403467 Msa0306550:three_prime_UTR
AGCGTTCCTGGGAAATGGCT+AGG 0.570204 2_3:-65400525 None:intergenic
TGTAGATGCTGCCAAATGCA+AGG 0.571013 2_3:-65402272 None:intergenic
GATAACATAGGAGGATGAAG+AGG 0.571188 2_3:-65398027 None:intergenic
GAGACTTCTATTTCATTGAA+GGG 0.571706 2_3:+65401319 Msa0306550:CDS
GGAGACACTGATATCAACTC+TGG 0.573695 2_3:-65401274 None:intergenic
AGGGTTGTCAACAGGGTCAG+TGG 0.575519 2_3:+65402093 Msa0306550:CDS
GAGGCCCAAGTCAAGGGATG+AGG 0.576270 2_3:+65401886 Msa0306550:CDS
ATTGATAGGACAACACAGCC+GGG 0.579359 2_3:-65400739 None:intergenic
ATAAACACTTCGAAGGAGAA+GGG 0.579651 2_3:+65402074 Msa0306550:CDS
CAGTTAGCATCACACAAAGA+TGG 0.584117 2_3:+65400979 Msa0306550:CDS
CATGTAAGGCTATAAGGTAA+GGG 0.585521 2_3:-65397953 None:intergenic
AAGGAGAAGGGTTGTCAACA+GGG 0.587471 2_3:+65402086 Msa0306550:CDS
ATGTAACTCTCCAAGTCTGA+TGG 0.588830 2_3:-65400712 None:intergenic
TAGTAGGTTTCATCCGTTGG+TGG 0.589116 2_3:+65398452 Msa0306550:CDS
CCGTTCAGGATCTCCAACAT+CGG 0.590086 2_3:+65398281 Msa0306550:CDS
TGTTAGGGAATCAAATGCAA+CGG 0.593606 2_3:+65398415 Msa0306550:CDS
CTCAGTTTCTCCCTTCAGGT+GGG 0.594092 2_3:+65403385 Msa0306550:CDS
TGTGTTTGTGTGTTATTCCG+TGG 0.595100 2_3:+65403347 Msa0306550:CDS
AAGCATCCTAGCCATTTCCC+AGG 0.599845 2_3:+65400519 Msa0306550:CDS
GAAAAGAAAGTGCACAAGCA+TGG 0.600104 2_3:+65402153 Msa0306550:CDS
ATCATCGCGATGATGATAGG+AGG 0.601669 2_3:-65399741 None:intergenic
AGCCTACATAAGGGGTTCCA+CGG 0.602293 2_3:-65403364 None:intergenic
AGCCAATGCATCCATTTGCA+AGG 0.602317 2_3:+65401781 Msa0306550:CDS
CCAGGGCCCTCAAGATTCGG+TGG 0.602415 2_3:-65402238 None:intergenic
AGAAGATCTATCAAAAGCGA+AGG 0.602873 2_3:+65398338 Msa0306550:CDS
CAGTTATCAACTTGACACAT+CGG 0.602997 2_3:-65398312 None:intergenic
AACGCAGCCGGATGAAGTGG+CGG 0.604112 2_3:+65398539 Msa0306550:CDS
CTGGTTGATAAACACTTCGA+AGG 0.604928 2_3:+65402067 Msa0306550:CDS
ATTTGTACTGACGTTTGCTG+TGG 0.605130 2_3:+65402003 Msa0306550:CDS
ATGGCACAATGTAATTCTGT+TGG 0.605548 2_3:+65403420 Msa0306550:exon
TATTCCTACAGGATCGTACT+GGG 0.605655 2_3:+65400472 Msa0306550:intron
TAACCAAGTCAAACGAGTTG+GGG 0.607095 2_3:+65403205 Msa0306550:CDS
AATTGATGTGATGATAACAT+AGG 0.607119 2_3:-65398039 None:intergenic
GTAGATTGGGTTGAAGTGCT+GGG 0.609912 2_3:+65403001 Msa0306550:intron
CATATGAGAGAAAGAAGCAG+TGG 0.610257 2_3:+65399878 Msa0306550:CDS
CCGAATCTTGAGGGCCCTGG+CGG 0.610502 2_3:+65402241 Msa0306550:CDS
AAGGAAAACGGAGTTGTAGA+CGG 0.611269 2_3:+65398484 Msa0306550:CDS
AAACAGCGACCTAGAACACT+AGG 0.611826 2_3:-65401569 None:intergenic
ATCGGAAAGTAGTAATCCTG+TGG 0.613254 2_3:+65400033 Msa0306550:CDS
TTAGCAGCAACCTGATTCAA+CGG 0.616434 2_3:-65398576 None:intergenic
GAATTAAAGAATCAACACGT+TGG 0.617872 2_3:-65400900 None:intergenic
TCGTCAAATTCAGACTCAAG+CGG 0.618525 2_3:-65401812 None:intergenic
GGATACGCATGTGCAAACCA+TGG 0.620975 2_3:+65401236 Msa0306550:CDS
TATGATGAGATAAAATTGAG+TGG 0.621764 2_3:+65401524 Msa0306550:CDS
CTCATCATGGCATAGGCATG+TGG 0.622626 2_3:-65403053 None:intergenic
TGTGCAAACCATGGGGAACG+TGG 0.625779 2_3:+65401245 Msa0306550:CDS
GTAGATGCTGCCAAATGCAA+GGG 0.626471 2_3:-65402271 None:intergenic
AAATTCATCTCCACAACAGG+AGG 0.631154 2_3:-65400079 None:intergenic
GAAAGGATGAACTTCAGTTG+TGG 0.631401 2_3:+65403484 Msa0306550:three_prime_UTR
AGGATCAGGAGATCCTGGTA+TGG 0.632079 2_3:+65401499 Msa0306550:CDS
GATGTGTGATGCCATTTCAG+AGG 0.633081 2_3:+65401844 Msa0306550:CDS
GTGTAACTTATCCTCAACTC+CGG 0.633854 2_3:-65403625 None:intergenic
CCGATGTTGGAGATCCTGAA+CGG 0.636020 2_3:-65398281 None:intergenic
GCATTTGGCAGCATCTACAA+CGG 0.637611 2_3:+65402276 Msa0306550:CDS
TGAGTATCTGAATTCAAACT+GGG 0.640355 2_3:-65400322 None:intergenic
AAATTGAAAATCATGTCAGA+AGG 0.641061 2_3:-65404032 None:intergenic
ACAACAGGAGGAGATGAAGA+CGG 0.642019 2_3:-65400067 None:intergenic
TTGCTGGTCATAATCGGCGT+CGG 0.649273 2_3:+65398511 Msa0306550:CDS
AGAAACTGAGCCTACATAAG+GGG 0.649316 2_3:-65403372 None:intergenic
TCATCGCGATGATGATAGGA+GGG 0.651428 2_3:-65399740 None:intergenic
TGATGTGATGATAACATAGG+AGG 0.653159 2_3:-65398036 None:intergenic
AAGAAAATCCTTAGTTAACG+GGG 0.660888 2_3:-65399786 None:intergenic
ACCCTTTAAAGAGATCAAGA+GGG 0.661561 2_3:-65400207 None:intergenic
GCAAGGGAGTAATACCGCCA+GGG 0.662761 2_3:-65402255 None:intergenic
GTATTGAGAAGCATAAAACC+AGG 0.663385 2_3:+65403459 Msa0306550:three_prime_UTR
GCATCTACAACGGATTCTGA+GGG 0.663873 2_3:+65402286 Msa0306550:CDS
TAACTTGGCAGATCGAGAAG+CGG 0.672400 2_3:+65403559 Msa0306550:three_prime_UTR
TCAACACCTGCTCAAAATGG+CGG 0.675936 2_3:+65399830 Msa0306550:CDS
TGTCCACCGACAATTGCCAA+AGG 0.680091 2_3:-65401295 None:intergenic
GGAAAGAAACTGTTGCATGT+TGG 0.681755 2_3:+65402024 Msa0306550:CDS
GCTTGAGTCTGAATTTGACG+AGG 0.690205 2_3:+65401814 Msa0306550:CDS
ATGAGACTAAGAATAAGGGT+AGG 0.692473 2_3:-65397929 None:intergenic
AAGGTTCTCGAATGTGAACG+AGG 0.693475 2_3:+65401952 Msa0306550:CDS
GTATCTGAATTCAAACTGGG+AGG 0.694347 2_3:-65400319 None:intergenic
TTTAACAAATGATCCACAGG+AGG 0.702723 2_3:+65402321 Msa0306550:CDS
TATTGAGAAGCATAAAACCA+GGG 0.706168 2_3:+65403460 Msa0306550:three_prime_UTR
GCAAACCATGGGGAACGTGG+AGG 0.714807 2_3:+65401248 Msa0306550:CDS
ATACGCATGTGCAAACCATG+GGG 0.741686 2_3:+65401238 Msa0306550:CDS
ACTTTGTGCCAGGAGCAGAG+AGG 0.743535 2_3:-65401348 None:intergenic
GCAGCAACCTGATTCAACGG+CGG 0.745706 2_3:-65398573 None:intergenic
TGATGATTCAGATTGCCAGG+AGG 0.754316 2_3:+65399919 Msa0306550:CDS
GAAGTGCTGGGAAACCCTTG+TGG 0.767474 2_3:+65403013 Msa0306550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTTTTCTTTTTTTTTT+AGG - chr2_3:65397871-65397890 None:intergenic 10.0%
!!! TGTTTTTTTTTTTTTTTGAA+AGG + chr2_3:65398658-65398677 Msa0306550:intron 10.0%
!!! TTTTCTTTTTTTTTTAGGTT+TGG - chr2_3:65397866-65397885 None:intergenic 15.0%
!! GATTAATTAATCAAGAAAAA+TGG + chr2_3:65397981-65398000 Msa0306550:exon 15.0%
!!! AGTAGTTTATATTACTATTT+TGG + chr2_3:65398741-65398760 Msa0306550:intron 15.0%
!!! ATTTGAAACAAATATTTTGT+TGG + chr2_3:65398787-65398806 Msa0306550:intron 15.0%
!! TCCTTCAAAAAAAAAATTAA+GGG - chr2_3:65399036-65399055 None:intergenic 15.0%
!! TCAAAGTAAATAACAATTAA+GGG - chr2_3:65399067-65399086 None:intergenic 15.0%
!! TTCAAAGTAAATAACAATTA+AGG - chr2_3:65399068-65399087 None:intergenic 15.0%
!!! TTCTTATTCTTTTAATTAAG+AGG + chr2_3:65400407-65400426 Msa0306550:intron 15.0%
!!! ATTTTAAAACAAACTTTAGA+CGG + chr2_3:65401138-65401157 Msa0306550:intron 15.0%
!!! TAGATTTAATTCTTTTATGT+AGG - chr2_3:65402763-65402782 None:intergenic 15.0%
!! ACACACAAAAATAAAAAGTA+AGG + chr2_3:65397897-65397916 Msa0306550:five_prime_UTR 20.0%
!! TAATTAATCAAAGACATGTA+AGG - chr2_3:65397970-65397989 None:intergenic 20.0%
!!! ATTTAAGTTTAGAGATTCTT+CGG - chr2_3:65398223-65398242 None:intergenic 20.0%
!!! TTTTTTTTTTTGAAAGGTCA+AGG + chr2_3:65398664-65398683 Msa0306550:intron 20.0%
!!! GTTCTTTTATAGCTAAATTT+TGG + chr2_3:65398903-65398922 Msa0306550:intron 20.0%
!!! TTTTTTTTTTTTGTGGTGTT+AGG + chr2_3:65398949-65398968 Msa0306550:intron 20.0%
!! CTCCTTCAAAAAAAAAATTA+AGG - chr2_3:65399037-65399056 None:intergenic 20.0%
!!! CTTAATTTTTTTTTTGAAGG+AGG + chr2_3:65399035-65399054 Msa0306550:intron 20.0%
!!! TTGGTTTGATTATATTGTAT+AGG + chr2_3:65399563-65399582 Msa0306550:intron 20.0%
!! ATATTGTATAGGAAAATTTG+AGG + chr2_3:65399574-65399593 Msa0306550:intron 20.0%
!!! TGATGTCATTTTAATGAATA+TGG + chr2_3:65400603-65400622 Msa0306550:intron 20.0%
!!! GATCACTTTTTTTTTATCTT+AGG + chr2_3:65401039-65401058 Msa0306550:intron 20.0%
!! TACACGAATATAAAAATATG+AGG - chr2_3:65401065-65401084 None:intergenic 20.0%
!!! TTTTATATTCGTGTAACTTT+TGG + chr2_3:65401070-65401089 Msa0306550:intron 20.0%
!! TAATAAAAATCTAGCTATGA+TGG - chr2_3:65401173-65401192 None:intergenic 20.0%
!!! TAGCTAGATTTTTATTATCA+AGG + chr2_3:65401176-65401195 Msa0306550:intron 20.0%
!! AGTATCAAAAATAGTCTAAT+TGG + chr2_3:65402424-65402443 Msa0306550:intron 20.0%
!! GGCTATTTAAATAAATTTGA+AGG + chr2_3:65402642-65402661 Msa0306550:intron 20.0%
!!! TACTGATTTATATTCTAAGT+AGG - chr2_3:65402845-65402864 None:intergenic 20.0%
!! TAATCACTCTTATAATATGT+TGG + chr2_3:65403079-65403098 Msa0306550:CDS 20.0%
!! CAAAAAAATGAACATATTAG+AGG + chr2_3:65403522-65403541 Msa0306550:three_prime_UTR 20.0%
!!! TATTTGAGGATATTGATAAT+AGG + chr2_3:65403911-65403930 Msa0306550:three_prime_UTR 20.0%
!!! ATTTGAGGATATTGATAATA+GGG + chr2_3:65403912-65403931 Msa0306550:three_prime_UTR 20.0%
!!! TCTACAAGAACAAATTTTAA+TGG - chr2_3:65404073-65404092 None:intergenic 20.0%
!! TTCAGATCTAAAGTAACATA+AGG - chr2_3:65397791-65397810 None:intergenic 25.0%
! AATTGATGTGATGATAACAT+AGG - chr2_3:65398042-65398061 None:intergenic 25.0%
!!! TGATAATAGATCACGTTTTT+TGG - chr2_3:65398082-65398101 None:intergenic 25.0%
!!! TTGATTTTGCTGTCATAAAA+CGG - chr2_3:65398170-65398189 None:intergenic 25.0%
! GAATCTCTAAACTTAAATCT+TGG + chr2_3:65398225-65398244 Msa0306550:CDS 25.0%
!!! GCCCTTAATTTTTTTTTTGA+AGG + chr2_3:65399032-65399051 Msa0306550:intron 25.0%
! CAAAATTGAGAATCTGATAA+AGG - chr2_3:65399314-65399333 None:intergenic 25.0%
!! AATTTTCGAAAATCGTTTCT+AGG + chr2_3:65399459-65399478 Msa0306550:intron 25.0%
!!! TTGTTTTTTCTTTTCTTGTG+TGG + chr2_3:65399529-65399548 Msa0306550:intron 25.0%
!!! TGTTTTTTCTTTTCTTGTGT+GGG + chr2_3:65399530-65399549 Msa0306550:intron 25.0%
!!! AATTCTAATGGTATTTTGAC+TGG + chr2_3:65400130-65400149 Msa0306550:CDS 25.0%
! TTAAAACCCAAAAGACAAAA+TGG - chr2_3:65400438-65400457 None:intergenic 25.0%
! ACATTGAAGCATAAATTGAT+AGG - chr2_3:65400756-65400775 None:intergenic 25.0%
! TAATCAACAATCCAATTACA+GGG - chr2_3:65401115-65401134 None:intergenic 25.0%
! TAGATTTAAACTGAAATTCC+AGG + chr2_3:65401211-65401230 Msa0306550:intron 25.0%
! TATACATCATCAGAAGTTAT+AGG + chr2_3:65401479-65401498 Msa0306550:CDS 25.0%
! TATGATGAGATAAAATTGAG+TGG + chr2_3:65401524-65401543 Msa0306550:CDS 25.0%
!!! TAACTTTTTTGTCAAAGTAG+GGG - chr2_3:65402358-65402377 None:intergenic 25.0%
!!! GTAACTTTTTTGTCAAAGTA+GGG - chr2_3:65402359-65402378 None:intergenic 25.0%
!!! AGTAACTTTTTTGTCAAAGT+AGG - chr2_3:65402360-65402379 None:intergenic 25.0%
! TTTGACAAAAAAGTTACTAG+AGG + chr2_3:65402362-65402381 Msa0306550:intron 25.0%
!!! GAGTTTTTTTTATAGACAAG+TGG + chr2_3:65402541-65402560 Msa0306550:intron 25.0%
! GAACATATTAGAGGTTAATT+TGG + chr2_3:65403531-65403550 Msa0306550:three_prime_UTR 25.0%
!! TCATTGATCTTTGAGAAAAA+AGG - chr2_3:65403824-65403843 None:intergenic 25.0%
! GTTACTGTAAAGTTTATTTG+AGG + chr2_3:65403897-65403916 Msa0306550:three_prime_UTR 25.0%
!! TTTGAGGATATTGATAATAG+GGG + chr2_3:65403913-65403932 Msa0306550:three_prime_UTR 25.0%
! CACTTTGTAATCATATAGTA+TGG - chr2_3:65403943-65403962 None:intergenic 25.0%
! AAATTGAAAATCATGTCAGA+AGG - chr2_3:65404035-65404054 None:intergenic 25.0%
TATGGGAAATTCATGTGAAA+GGG - chr2_3:65397824-65397843 None:intergenic 30.0%
!!! TTTTTTAGGTTTGGTGTTTG+AGG - chr2_3:65397857-65397876 None:intergenic 30.0%
!!! TAATAGATCACGTTTTTTGG+TGG - chr2_3:65398079-65398098 None:intergenic 30.0%
TTCACATCCAAAACGATAAT+TGG + chr2_3:65398115-65398134 Msa0306550:CDS 30.0%
ATAATTGGAACCCTAAAGAA+TGG + chr2_3:65398130-65398149 Msa0306550:CDS 30.0%
AAACTTAAATCTTGGAAGCA+CGG + chr2_3:65398233-65398252 Msa0306550:CDS 30.0%
!!! TTTTTTGAAAGGTCAAGGTT+TGG + chr2_3:65398669-65398688 Msa0306550:intron 30.0%
!! CAAGGTTTGGTTTCTATTTT+TGG + chr2_3:65398682-65398701 Msa0306550:intron 30.0%
TAGGAAAATTTGAGGAAAGA+AGG + chr2_3:65399582-65399601 Msa0306550:intron 30.0%
AGCTTGTACAAATTCTGAAT+AGG + chr2_3:65399627-65399646 Msa0306550:CDS 30.0%
AAGAAAATCCTTAGTTAACG+GGG - chr2_3:65399789-65399808 None:intergenic 30.0%
CAAGAAAATCCTTAGTTAAC+GGG - chr2_3:65399790-65399809 None:intergenic 30.0%
GCAAGAAAATCCTTAGTTAA+CGG - chr2_3:65399791-65399810 None:intergenic 30.0%
!!! TTCGCGAAAGTATTTTTCAT+CGG + chr2_3:65400015-65400034 Msa0306550:CDS 30.0%
ATTAGAGGTCTCAATTCTAA+TGG + chr2_3:65400118-65400137 Msa0306550:CDS 30.0%
!!! AATGGTATTTTGACTGGATT+TGG + chr2_3:65400136-65400155 Msa0306550:CDS 30.0%
TAGTAGTACAACTATGACTT+TGG - chr2_3:65400186-65400205 None:intergenic 30.0%
TGAGTATCTGAATTCAAACT+GGG - chr2_3:65400325-65400344 None:intergenic 30.0%
!! GGGTTTTAATCTATTTGTGA+TGG + chr2_3:65400449-65400468 Msa0306550:intron 30.0%
! CCGATTCGCAAAATATTAAT+GGG - chr2_3:65400582-65400601 None:intergenic 30.0%
! CCCATTAATATTTTGCGAAT+CGG + chr2_3:65400579-65400598 Msa0306550:intron 30.0%
! TCCGATTCGCAAAATATTAA+TGG - chr2_3:65400583-65400602 None:intergenic 30.0%
! GTCCTTTTCAGATTTACAAT+TGG + chr2_3:65400677-65400696 Msa0306550:intron 30.0%
AGCCAATTGTAAATCTGAAA+AGG - chr2_3:65400682-65400701 None:intergenic 30.0%
GAATTAAAGAATCAACACGT+TGG - chr2_3:65400903-65400922 None:intergenic 30.0%
ATAACTCAGATTCTGATTTC+TGG + chr2_3:65400923-65400942 Msa0306550:CDS 30.0%
! GGAAGATTTCTTGTTTATTC+TGG + chr2_3:65400952-65400971 Msa0306550:CDS 30.0%
! TATATTCGTGTAACTTTTGG+AGG + chr2_3:65401073-65401092 Msa0306550:intron 30.0%
AATCAACAATCCAATTACAG+GGG - chr2_3:65401114-65401133 None:intergenic 30.0%
GTAATCAACAATCCAATTAC+AGG - chr2_3:65401116-65401135 None:intergenic 30.0%
TTTAAACTGAAATTCCAGGA+AGG + chr2_3:65401215-65401234 Msa0306550:intron 30.0%
GAGACTTCTATTTCATTGAA+GGG + chr2_3:65401319-65401338 Msa0306550:CDS 30.0%
CAATGAATCCTGCAAAATTT+AGG - chr2_3:65401443-65401462 None:intergenic 30.0%
!! AGGAGCATGAACATAATTTT+GGG + chr2_3:65401864-65401883 Msa0306550:CDS 30.0%
!!! AACTTTTTTGTCAAAGTAGG+GGG - chr2_3:65402357-65402376 None:intergenic 30.0%
AATTCAGTAAATCCGAATGA+GGG - chr2_3:65402394-65402413 None:intergenic 30.0%
TTAAACCCCATAAAAACCAT+AGG - chr2_3:65402454-65402473 None:intergenic 30.0%
! GGTTTTTATGGGGTTTAAAT+AGG + chr2_3:65402456-65402475 Msa0306550:intron 30.0%
GTTGTCAAAAAGAAGAACAA+AGG + chr2_3:65402679-65402698 Msa0306550:intron 30.0%
!! GACATACTTTAAGGTTGATA+AGG - chr2_3:65402814-65402833 None:intergenic 30.0%
TCAGTAGTTATCATGTTGTT+TGG + chr2_3:65402859-65402878 Msa0306550:intron 30.0%
AATCCTAAGTTGTAGAGAAA+AGG - chr2_3:65402897-65402916 None:intergenic 30.0%
AAAATACAGACAAGAAGTCA+AGG - chr2_3:65402969-65402988 None:intergenic 30.0%
!!! CTTGTCTGTATTTTTTATGC+TGG + chr2_3:65402975-65402994 Msa0306550:intron 30.0%
! ATTATTTCTCATCATGGCAT+AGG - chr2_3:65403063-65403082 None:intergenic 30.0%
! AGAGTGATTATTTCTCATCA+TGG - chr2_3:65403069-65403088 None:intergenic 30.0%
AACTTCACTTCTTTGTCTAT+CGG - chr2_3:65403120-65403139 None:intergenic 30.0%
! TGTTGGTGAATGAAAACTAA+AGG + chr2_3:65403437-65403456 Msa0306550:three_prime_UTR 30.0%
! TATTGAGAAGCATAAAACCA+GGG + chr2_3:65403460-65403479 Msa0306550:three_prime_UTR 30.0%
! GTTAATTTGGAGCTATAACT+TGG + chr2_3:65403544-65403563 Msa0306550:three_prime_UTR 30.0%
AAAATTTCAACACCCAATTC+AGG - chr2_3:65403650-65403669 None:intergenic 30.0%
! TTTTCTGTCCTTATATTGTG+AGG - chr2_3:65403717-65403736 None:intergenic 30.0%
GAATAAAGAGAAACTGAGTT+GGG + chr2_3:65403760-65403779 Msa0306550:three_prime_UTR 30.0%
GTTGATGCAGTCAAATAATT+TGG + chr2_3:65403788-65403807 Msa0306550:three_prime_UTR 30.0%
! TTGATCTTTGAGAAAAAAGG+AGG - chr2_3:65403821-65403840 None:intergenic 30.0%
CTATGGGAAATTCATGTGAA+AGG - chr2_3:65397825-65397844 None:intergenic 35.0%
ATGAGACTAAGAATAAGGGT+AGG - chr2_3:65397932-65397951 None:intergenic 35.0%
GGGTATGAGACTAAGAATAA+GGG - chr2_3:65397936-65397955 None:intergenic 35.0%
AGGGTATGAGACTAAGAATA+AGG - chr2_3:65397937-65397956 None:intergenic 35.0%
CATGTAAGGCTATAAGGTAA+GGG - chr2_3:65397956-65397975 None:intergenic 35.0%
ACATGTAAGGCTATAAGGTA+AGG - chr2_3:65397957-65397976 None:intergenic 35.0%
CAAAGACATGTAAGGCTATA+AGG - chr2_3:65397962-65397981 None:intergenic 35.0%
TGATGTGATGATAACATAGG+AGG - chr2_3:65398039-65398058 None:intergenic 35.0%
! TAGGGTTCCAATTATCGTTT+TGG - chr2_3:65398125-65398144 None:intergenic 35.0%
GAACCCTAAAGAATGGAATT+GGG + chr2_3:65398137-65398156 Msa0306550:CDS 35.0%
TGTCCCAATTCCATTCTTTA+GGG - chr2_3:65398143-65398162 None:intergenic 35.0%
! AACTTAAATCTTGGAAGCAC+GGG + chr2_3:65398234-65398253 Msa0306550:CDS 35.0%
CAGTTATCAACTTGACACAT+CGG - chr2_3:65398315-65398334 None:intergenic 35.0%
AGAAGATCTATCAAAAGCGA+AGG + chr2_3:65398338-65398357 Msa0306550:CDS 35.0%
AGCTCATAGTAAAGCTTCTA+AGG + chr2_3:65398389-65398408 Msa0306550:CDS 35.0%
!! AAAGCTTCTAAGGCTTTGTT+AGG + chr2_3:65398399-65398418 Msa0306550:CDS 35.0%
!! AAGCTTCTAAGGCTTTGTTA+GGG + chr2_3:65398400-65398419 Msa0306550:CDS 35.0%
TGTTAGGGAATCAAATGCAA+CGG + chr2_3:65398415-65398434 Msa0306550:CDS 35.0%
TGGAGTTTGATGAAGGAAAA+CGG + chr2_3:65398472-65398491 Msa0306550:CDS 35.0%
! TTGTGTGGGCTAATATTGTT+TGG + chr2_3:65399544-65399563 Msa0306550:intron 35.0%
TGTACAAGCTGTTCTTTATC+TGG - chr2_3:65399617-65399636 None:intergenic 35.0%
! AATTTTGCAGTAAGATCAGC+GGG - chr2_3:65399662-65399681 None:intergenic 35.0%
! CAATTTTGCAGTAAGATCAG+CGG - chr2_3:65399663-65399682 None:intergenic 35.0%
TGATCTTACTGCAAAATTGC+TGG + chr2_3:65399664-65399683 Msa0306550:CDS 35.0%
TGGCAATCTGAATCATCATT+TGG - chr2_3:65399917-65399936 None:intergenic 35.0%
AAATGATGATTCAGATTGCC+AGG + chr2_3:65399916-65399935 Msa0306550:CDS 35.0%
GAAAAATACTTTCGCGAAGA+TGG - chr2_3:65400013-65400032 None:intergenic 35.0%
ATCCCTCTTGATCTCTTTAA+AGG + chr2_3:65400205-65400224 Msa0306550:CDS 35.0%
TCCCTCTTGATCTCTTTAAA+GGG + chr2_3:65400206-65400225 Msa0306550:CDS 35.0%
! ACCCTTTAAAGAGATCAAGA+GGG - chr2_3:65400210-65400229 None:intergenic 35.0%
!! GATGCATAACCAGCTTTAAA+TGG - chr2_3:65400280-65400299 None:intergenic 35.0%
TAAAGCTGGTTATGCATCTT+CGG + chr2_3:65400282-65400301 Msa0306550:CDS 35.0%
CTGAGTATCTGAATTCAAAC+TGG - chr2_3:65400326-65400345 None:intergenic 35.0%
CAGTTTGAATTCAGATACTC+AGG + chr2_3:65400324-65400343 Msa0306550:CDS 35.0%
TTGAATTCAGATACTCAGGT+TGG + chr2_3:65400328-65400347 Msa0306550:intron 35.0%
TGAATTCAGATACTCAGGTT+GGG + chr2_3:65400329-65400348 Msa0306550:intron 35.0%
!! GCTTAGCCATTTTGTCTTTT+GGG + chr2_3:65400429-65400448 Msa0306550:intron 35.0%
ATTTGTGATGGTATTCCTAC+AGG + chr2_3:65400461-65400480 Msa0306550:intron 35.0%
CAATATGCAAGTAATCAGCA+AGG - chr2_3:65400850-65400869 None:intergenic 35.0%
! GATTCTGATTTCTGGAGAAA+TGG + chr2_3:65400931-65400950 Msa0306550:CDS 35.0%
!!! GACTAGTTTTGATTTCTGAC+TGG + chr2_3:65401012-65401031 Msa0306550:intron 35.0%
ATCAACAATCCAATTACAGG+GGG - chr2_3:65401113-65401132 None:intergenic 35.0%
GGAGACTTCTATTTCATTGA+AGG + chr2_3:65401318-65401337 Msa0306550:CDS 35.0%
ATAACACAACGTCCAGAAAA+GGG - chr2_3:65401388-65401407 None:intergenic 35.0%
! CTGTTTGTCCTAAATTTTGC+AGG + chr2_3:65401432-65401451 Msa0306550:intron 35.0%
TCATCAGAAGTTATAGGATC+AGG + chr2_3:65401485-65401504 Msa0306550:CDS 35.0%
AATACATCTCCTAGTGTTCT+AGG + chr2_3:65401560-65401579 Msa0306550:CDS 35.0%
CAACTTACATGTTTGTGAAC+AGG + chr2_3:65401718-65401737 Msa0306550:intron 35.0%
!! GAGGAGCATGAACATAATTT+TGG + chr2_3:65401863-65401882 Msa0306550:CDS 35.0%
! AGCATGAACATAATTTTGGG+AGG + chr2_3:65401867-65401886 Msa0306550:CDS 35.0%
!! TTGCACTTTTTGAATGAGCT+TGG + chr2_3:65401911-65401930 Msa0306550:CDS 35.0%
! ACTTTTTGAATGAGCTTGGT+TGG + chr2_3:65401915-65401934 Msa0306550:CDS 35.0%
ATAAACACTTCGAAGGAGAA+GGG + chr2_3:65402074-65402093 Msa0306550:CDS 35.0%
TCACTGCTCTATTTAGAAGT+TGG - chr2_3:65402135-65402154 None:intergenic 35.0%
CGGTGGAAATACATATTTCT+TGG - chr2_3:65402224-65402243 None:intergenic 35.0%
CTCTTTAACAAATGATCCAC+AGG + chr2_3:65402318-65402337 Msa0306550:CDS 35.0%
TTTAACAAATGATCCACAGG+AGG + chr2_3:65402321-65402340 Msa0306550:CDS 35.0%
!!! ACTTTTTTGTCAAAGTAGGG+GGG - chr2_3:65402356-65402375 None:intergenic 35.0%
CAATTCAGTAAATCCGAATG+AGG - chr2_3:65402395-65402414 None:intergenic 35.0%
TAGTCTAATTGGATTGCCTA+TGG + chr2_3:65402435-65402454 Msa0306550:intron 35.0%
! TGGATTGCCTATGGTTTTTA+TGG + chr2_3:65402444-65402463 Msa0306550:intron 35.0%
! GGATTGCCTATGGTTTTTAT+GGG + chr2_3:65402445-65402464 Msa0306550:intron 35.0%
! GATTGCCTATGGTTTTTATG+GGG + chr2_3:65402446-65402465 Msa0306550:intron 35.0%
AAAAAAACTCTGACACAGTC+TGG - chr2_3:65402531-65402550 None:intergenic 35.0%
TTTAAATAGCCAAGCCTGTT+AGG - chr2_3:65402633-65402652 None:intergenic 35.0%
ATATTCTAAGTAGGCTGACA+AGG - chr2_3:65402836-65402855 None:intergenic 35.0%
! CATCCTTTTCTCTACAACTT+AGG + chr2_3:65402891-65402910 Msa0306550:intron 35.0%
! TTTTATGCTGGTGTGTAGAT+TGG + chr2_3:65402987-65403006 Msa0306550:intron 35.0%
TTTATGCTGGTGTGTAGATT+GGG + chr2_3:65402988-65403007 Msa0306550:intron 35.0%
TTTGTCTATCGGAACGTTTA+CGG - chr2_3:65403109-65403128 None:intergenic 35.0%
! TTTTGCATTAGCTCAATTCC+CGG - chr2_3:65403179-65403198 None:intergenic 35.0%
ATTAACCAAGTCAAACGAGT+TGG + chr2_3:65403203-65403222 Msa0306550:CDS 35.0%
TTAACCAAGTCAAACGAGTT+GGG + chr2_3:65403204-65403223 Msa0306550:CDS 35.0%
! TGAACCGGAAAATCTTCTTT+TGG - chr2_3:65403267-65403286 None:intergenic 35.0%
! AAAGAAGATTTTCCGGTTCA+CGG + chr2_3:65403267-65403286 Msa0306550:CDS 35.0%
! GCTAGCATCGAATGAATAAA+GGG - chr2_3:65403308-65403327 None:intergenic 35.0%
! AGCTAGCATCGAATGAATAA+AGG - chr2_3:65403309-65403328 None:intergenic 35.0%
AGGTGGGAAAACTTGAATTA+TGG + chr2_3:65403401-65403420 Msa0306550:CDS 35.0%
ATGGCACAATGTAATTCTGT+TGG + chr2_3:65403420-65403439 Msa0306550:exon 35.0%
! GTATTGAGAAGCATAAAACC+AGG + chr2_3:65403459-65403478 Msa0306550:three_prime_UTR 35.0%
AGGATAAGTTACACCTGAAT+TGG + chr2_3:65403634-65403653 Msa0306550:three_prime_UTR 35.0%
GGATAAGTTACACCTGAATT+GGG + chr2_3:65403635-65403654 Msa0306550:three_prime_UTR 35.0%
GTTCTATCTGGTCTAAAAAG+TGG - chr2_3:65403690-65403709 None:intergenic 35.0%
GAACATGTCCTCACAATATA+AGG + chr2_3:65403706-65403725 Msa0306550:three_prime_UTR 35.0%
CAGTTTCTCTTTATTCCCAA+TGG - chr2_3:65403756-65403775 None:intergenic 35.0%
GGAATAAAGAGAAACTGAGT+TGG + chr2_3:65403759-65403778 Msa0306550:three_prime_UTR 35.0%
! ATGATGCATAGTTCTATAGC+AGG - chr2_3:65403858-65403877 None:intergenic 35.0%
GATAACATAGGAGGATGAAG+AGG - chr2_3:65398030-65398049 None:intergenic 40.0%
GGAACCCTAAAGAATGGAAT+TGG + chr2_3:65398136-65398155 Msa0306550:CDS 40.0%
CTGTCCCAATTCCATTCTTT+AGG - chr2_3:65398144-65398163 None:intergenic 40.0%
AACAACAGTAGAACCACAAC+AGG + chr2_3:65398197-65398216 Msa0306550:CDS 40.0%
GGATTATCATCGACGTCATA+AGG + chr2_3:65398359-65398378 Msa0306550:CDS 40.0%
!! GGTTTTGTCAACAGTGTAGT+AGG + chr2_3:65398436-65398455 Msa0306550:CDS 40.0%
AAGGAAAACGGAGTTGTAGA+CGG + chr2_3:65398484-65398503 Msa0306550:CDS 40.0%
TTAGCAGCAACCTGATTCAA+CGG - chr2_3:65398579-65398598 None:intergenic 40.0%
! GAATCAGGTTGCTGCTAATT+TGG + chr2_3:65398581-65398600 Msa0306550:CDS 40.0%
! TTGTTGACTGCTATTGCTGA+TGG + chr2_3:65398615-65398634 Msa0306550:CDS 40.0%
ACTGCAAAATTGCTGGATGT+TGG + chr2_3:65399671-65399690 Msa0306550:CDS 40.0%
TTGATCATCGCGATGATGAT+AGG - chr2_3:65399747-65399766 None:intergenic 40.0%
CATATGATCTGCACTACTTG+TGG - chr2_3:65399864-65399883 None:intergenic 40.0%
CATATGAGAGAAAGAAGCAG+TGG + chr2_3:65399878-65399897 Msa0306550:CDS 40.0%
ATTTAACTCGAACATCCTCC+TGG - chr2_3:65399937-65399956 None:intergenic 40.0%
! AAATTGCCGCTGCAACTTTT+TGG + chr2_3:65399953-65399972 Msa0306550:CDS 40.0%
ATCGGAAAGTAGTAATCCTG+TGG + chr2_3:65400033-65400052 Msa0306550:CDS 40.0%
GTAGTAATCCTGTGGATGAA+AGG + chr2_3:65400041-65400060 Msa0306550:CDS 40.0%
AAATTCATCTCCACAACAGG+AGG - chr2_3:65400082-65400101 None:intergenic 40.0%
CCAAAATTCATCTCCACAAC+AGG - chr2_3:65400085-65400104 None:intergenic 40.0%
! CCTGTTGTGGAGATGAATTT+TGG + chr2_3:65400082-65400101 Msa0306550:CDS 40.0%
!! GAGATGAATTTTGGTCTGCA+AGG + chr2_3:65400091-65400110 Msa0306550:CDS 40.0%
!!! GGTATTTTGACTGGATTTGG+AGG + chr2_3:65400139-65400158 Msa0306550:CDS 40.0%
ATTTGGAGGCCATGCAAATA+AGG + chr2_3:65400153-65400172 Msa0306550:CDS 40.0%
!! GGCTAGTTTCCTTATTTGCA+TGG - chr2_3:65400165-65400184 None:intergenic 40.0%
! GACCCTTTAAAGAGATCAAG+AGG - chr2_3:65400211-65400230 None:intergenic 40.0%
! CAAAGTGCACCATTTAAAGC+TGG + chr2_3:65400268-65400287 Msa0306550:CDS 40.0%
AAAGCTGGTTATGCATCTTC+GGG + chr2_3:65400283-65400302 Msa0306550:CDS 40.0%
GTATCTGAATTCAAACTGGG+AGG - chr2_3:65400322-65400341 None:intergenic 40.0%
TTCAAAGCAAGCATGAACCA+GGG - chr2_3:65400365-65400384 None:intergenic 40.0%
ATTCAAAGCAAGCATGAACC+AGG - chr2_3:65400366-65400385 None:intergenic 40.0%
!! GGCTTAGCCATTTTGTCTTT+TGG + chr2_3:65400428-65400447 Msa0306550:intron 40.0%
TATTCCTACAGGATCGTACT+GGG + chr2_3:65400472-65400491 Msa0306550:intron 40.0%
TACTAACACGTCTTTGCATC+TGG - chr2_3:65400643-65400662 None:intergenic 40.0%
ATGTAACTCTCCAAGTCTGA+TGG - chr2_3:65400715-65400734 None:intergenic 40.0%
CAGACTTGGAGAGTTACATA+AGG + chr2_3:65400716-65400735 Msa0306550:CDS 40.0%
AATTGATAGGACAACACAGC+CGG - chr2_3:65400743-65400762 None:intergenic 40.0%
! TTCAATGTCTTCTGCTGCTT+GGG + chr2_3:65400768-65400787 Msa0306550:CDS 40.0%
CAGTTAGCATCACACAAAGA+TGG + chr2_3:65400979-65400998 Msa0306550:CDS 40.0%
! CTAATTTTCCCCCCTGTAAT+TGG + chr2_3:65401101-65401120 Msa0306550:intron 40.0%
TCAACAATCCAATTACAGGG+GGG - chr2_3:65401112-65401131 None:intergenic 40.0%
GTTGATATCAGTGTCTCCTT+TGG + chr2_3:65401279-65401298 Msa0306550:CDS 40.0%
ATCAGTACTAACTTTGTGCC+AGG - chr2_3:65401361-65401380 None:intergenic 40.0%
!!! GTACTGATTTTCCCCTTTTC+TGG + chr2_3:65401373-65401392 Msa0306550:intron 40.0%
TAACACAACGTCCAGAAAAG+GGG - chr2_3:65401387-65401406 None:intergenic 40.0%
CATAACACAACGTCCAGAAA+AGG - chr2_3:65401389-65401408 None:intergenic 40.0%
CGTTGTGTTATGCTTCTTTC+TGG + chr2_3:65401397-65401416 Msa0306550:intron 40.0%
ATCTCATCATAGACCATACC+AGG - chr2_3:65401515-65401534 None:intergenic 40.0%
ACTGCACATGATTACTGTGA+TGG + chr2_3:65401620-65401639 Msa0306550:intron 40.0%
!! GATGCATTGGCTATTATCAC+TGG - chr2_3:65401773-65401792 None:intergenic 40.0%
TCGTCAAATTCAGACTCAAG+CGG - chr2_3:65401815-65401834 None:intergenic 40.0%
! ATGTTCATGCTCCTCTGAAA+TGG - chr2_3:65401858-65401877 None:intergenic 40.0%
! ATTTGTACTGACGTTTGCTG+TGG + chr2_3:65402003-65402022 Msa0306550:CDS 40.0%
GGAAAGAAACTGTTGCATGT+TGG + chr2_3:65402024-65402043 Msa0306550:CDS 40.0%
ATCAACCAGCTTATCCAGAA+GGG - chr2_3:65402056-65402075 None:intergenic 40.0%
TATCAACCAGCTTATCCAGA+AGG - chr2_3:65402057-65402076 None:intergenic 40.0%
!! CTGGTTGATAAACACTTCGA+AGG + chr2_3:65402067-65402086 Msa0306550:CDS 40.0%
GATAAACACTTCGAAGGAGA+AGG + chr2_3:65402073-65402092 Msa0306550:CDS 40.0%
! GAAAAGAAAGTGCACAAGCA+TGG + chr2_3:65402153-65402172 Msa0306550:CDS 40.0%
TGTATTTCCACCGAATCTTG+AGG + chr2_3:65402231-65402250 Msa0306550:CDS 40.0%
GTATTTCCACCGAATCTTGA+GGG + chr2_3:65402232-65402251 Msa0306550:CDS 40.0%
TAGAGGAAATGTCCCTCATT+CGG + chr2_3:65402379-65402398 Msa0306550:intron 40.0%
CCTAACATATACTAGGCAGT+AGG - chr2_3:65402508-65402527 None:intergenic 40.0%
CCTACTGCCTAGTATATGTT+AGG + chr2_3:65402505-65402524 Msa0306550:intron 40.0%
AGTCTGGCCTAACATATACT+AGG - chr2_3:65402515-65402534 None:intergenic 40.0%
TAAATCCTCTTGTGCCTAAC+AGG + chr2_3:65402616-65402635 Msa0306550:intron 40.0%
GCTGACAAGGACATACTTTA+AGG - chr2_3:65402823-65402842 None:intergenic 40.0%
GAAACCCTTGTGGATGAAAA+CGG + chr2_3:65403023-65403042 Msa0306550:CDS 40.0%
AAACCCTTGTGGATGAAAAC+GGG + chr2_3:65403024-65403043 Msa0306550:CDS 40.0%
TTGTCTATCGGAACGTTTAC+GGG - chr2_3:65403108-65403127 None:intergenic 40.0%
TAACCAAGTCAAACGAGTTG+GGG + chr2_3:65403205-65403224 Msa0306550:CDS 40.0%
AACTTCTGCAATTGCACACT+TGG - chr2_3:65403240-65403259 None:intergenic 40.0%
! TGTGTTTGTGTGTTATTCCG+TGG + chr2_3:65403347-65403366 Msa0306550:CDS 40.0%
AGAAACTGAGCCTACATAAG+GGG - chr2_3:65403375-65403394 None:intergenic 40.0%
GAGAAACTGAGCCTACATAA+GGG - chr2_3:65403376-65403395 None:intergenic 40.0%
!! TTCAAGTTTTCCCACCTGAA+GGG - chr2_3:65403398-65403417 None:intergenic 40.0%
!! ATTCAAGTTTTCCCACCTGA+AGG - chr2_3:65403399-65403418 None:intergenic 40.0%
GAAAGGATGAACTTCAGTTG+TGG + chr2_3:65403484-65403503 Msa0306550:three_prime_UTR 40.0%
GTGTAACTTATCCTCAACTC+CGG - chr2_3:65403628-65403647 None:intergenic 40.0%
TTGTGAGGACATGTTCTATC+TGG - chr2_3:65403702-65403721 None:intergenic 40.0%
TTATGAGAGCAGTAAGCCAT+TGG + chr2_3:65403737-65403756 Msa0306550:three_prime_UTR 40.0%
TATGAGAGCAGTAAGCCATT+GGG + chr2_3:65403738-65403757 Msa0306550:three_prime_UTR 40.0%
TTTGAGGAGAGAGGAGCTAT+GGG - chr2_3:65397841-65397860 None:intergenic 45.0%
GCAAACAAACGAATCCGTTC+AGG + chr2_3:65398267-65398286 Msa0306550:CDS 45.0%
ATCGGATATGAAGCCGATGT+TGG - chr2_3:65398297-65398316 None:intergenic 45.0%
GTGTAGTAGGTTTCATCCGT+TGG + chr2_3:65398449-65398468 Msa0306550:CDS 45.0%
TAGTAGGTTTCATCCGTTGG+TGG + chr2_3:65398452-65398471 Msa0306550:CDS 45.0%
CCTTCATCAAACTCCACCAA+CGG - chr2_3:65398468-65398487 None:intergenic 45.0%
!! GGAGACTTGCTGGTCATAAT+CGG + chr2_3:65398505-65398524 Msa0306550:CDS 45.0%
GCTATTGCTGATGGTTCTCA+AGG + chr2_3:65398624-65398643 Msa0306550:CDS 45.0%
TGCTGATGGTTCTCAAGGTT+TGG + chr2_3:65398629-65398648 Msa0306550:intron 45.0%
CAGTAAGATCAGCGGGTAAA+GGG - chr2_3:65399655-65399674 None:intergenic 45.0%
AGGAGGGTGAAGTTTGCATT+TGG - chr2_3:65399727-65399746 None:intergenic 45.0%
TCATCGCGATGATGATAGGA+GGG - chr2_3:65399743-65399762 None:intergenic 45.0%
ATCATCGCGATGATGATAGG+AGG - chr2_3:65399744-65399763 None:intergenic 45.0%
AATCCTTAGTTAACGGGGCA+GGG - chr2_3:65399784-65399803 None:intergenic 45.0%
AAATCCTTAGTTAACGGGGC+AGG - chr2_3:65399785-65399804 None:intergenic 45.0%
!!! CCATTTTGAGCAGGTGTTGA+TGG - chr2_3:65399830-65399849 None:intergenic 45.0%
CCATCAACACCTGCTCAAAA+TGG + chr2_3:65399827-65399846 Msa0306550:CDS 45.0%
TCAACACCTGCTCAAAATGG+CGG + chr2_3:65399830-65399849 Msa0306550:CDS 45.0%
TGATGATTCAGATTGCCAGG+AGG + chr2_3:65399919-65399938 Msa0306550:CDS 45.0%
GCGAAGATGGCAATTTCGAT+GGG - chr2_3:65400000-65400019 None:intergenic 45.0%
ACAACAGGAGGAGATGAAGA+CGG - chr2_3:65400070-65400089 None:intergenic 45.0%
GGTCTGCAAGGTAGTATTAG+AGG + chr2_3:65400103-65400122 Msa0306550:CDS 45.0%
GTATTCCTACAGGATCGTAC+TGG + chr2_3:65400471-65400490 Msa0306550:intron 45.0%
TTCTACACGACCATCAGACT+TGG + chr2_3:65400702-65400721 Msa0306550:CDS 45.0%
TTGGAGAGTTACATAAGGCC+CGG + chr2_3:65400721-65400740 Msa0306550:CDS 45.0%
ATTGATAGGACAACACAGCC+GGG - chr2_3:65400742-65400761 None:intergenic 45.0%
CTTCAATGTCTTCTGCTGCT+TGG + chr2_3:65400767-65400786 Msa0306550:CDS 45.0%
GATACGCATGTGCAAACCAT+GGG + chr2_3:65401237-65401256 Msa0306550:CDS 45.0%
ATACGCATGTGCAAACCATG+GGG + chr2_3:65401238-65401257 Msa0306550:CDS 45.0%
GGAGACACTGATATCAACTC+TGG - chr2_3:65401277-65401296 None:intergenic 45.0%
GTGTCTCCTTTGGCAATTGT+CGG + chr2_3:65401289-65401308 Msa0306550:CDS 45.0%
GTTATAGGATCAGGAGATCC+TGG + chr2_3:65401494-65401513 Msa0306550:CDS 45.0%
AAACAGCGACCTAGAACACT+AGG - chr2_3:65401572-65401591 None:intergenic 45.0%
! TCTAGGTCGCTGTTTCATTG+AGG + chr2_3:65401577-65401596 Msa0306550:CDS 45.0%
AGCCAATGCATCCATTTGCA+AGG + chr2_3:65401781-65401800 Msa0306550:CDS 45.0%
CTCCTTGCAAATGGATGCAT+TGG - chr2_3:65401786-65401805 None:intergenic 45.0%
GCTTGAGTCTGAATTTGACG+AGG + chr2_3:65401814-65401833 Msa0306550:CDS 45.0%
! GATGTGTGATGCCATTTCAG+AGG + chr2_3:65401844-65401863 Msa0306550:CDS 45.0%
AAAGCCTCATCCCTTGACTT+GGG - chr2_3:65401893-65401912 None:intergenic 45.0%
! AGCTTGGTTGGCTGTTTCAA+AGG + chr2_3:65401927-65401946 Msa0306550:CDS 45.0%
! GCTTGGTTGGCTGTTTCAAA+GGG + chr2_3:65401928-65401947 Msa0306550:CDS 45.0%
! GTTGGCTGTTTCAAAGGGAA+AGG + chr2_3:65401933-65401952 Msa0306550:CDS 45.0%
AAGGTTCTCGAATGTGAACG+AGG + chr2_3:65401952-65401971 Msa0306550:CDS 45.0%
TTCCAGATTATTCGCTCGAC+AGG + chr2_3:65401975-65401994 Msa0306550:CDS 45.0%
AACCTGTCGAGCGAATAATC+TGG - chr2_3:65401980-65401999 None:intergenic 45.0%
CATGTTGGTCAAAACCCTTC+TGG + chr2_3:65402039-65402058 Msa0306550:CDS 45.0%
CAAAACCCTTCTGGATAAGC+TGG + chr2_3:65402048-65402067 Msa0306550:CDS 45.0%
AAGGAGAAGGGTTGTCAACA+GGG + chr2_3:65402086-65402105 Msa0306550:CDS 45.0%
CGGTATTACTCCCTTGCATT+TGG + chr2_3:65402261-65402280 Msa0306550:CDS 45.0%
GTAGATGCTGCCAAATGCAA+GGG - chr2_3:65402274-65402293 None:intergenic 45.0%
TGTAGATGCTGCCAAATGCA+AGG - chr2_3:65402275-65402294 None:intergenic 45.0%
GCATTTGGCAGCATCTACAA+CGG + chr2_3:65402276-65402295 Msa0306550:CDS 45.0%
! AGCATCTACAACGGATTCTG+AGG + chr2_3:65402285-65402304 Msa0306550:CDS 45.0%
! GCATCTACAACGGATTCTGA+GGG + chr2_3:65402286-65402305 Msa0306550:CDS 45.0%
GGGGAAATATTTACCTCCTG+TGG - chr2_3:65402337-65402356 None:intergenic 45.0%
GTCATGCATGTCAGTCAACA+GGG + chr2_3:65402478-65402497 Msa0306550:intron 45.0%
TCATGCATGTCAGTCAACAG+GGG + chr2_3:65402479-65402498 Msa0306550:intron 45.0%
!! TGTAGATTGGGTTGAAGTGC+TGG + chr2_3:65403000-65403019 Msa0306550:intron 45.0%
!! GTAGATTGGGTTGAAGTGCT+GGG + chr2_3:65403001-65403020 Msa0306550:intron 45.0%
TTAGCTCAATTCCCGGTGAT+GGG - chr2_3:65403172-65403191 None:intergenic 45.0%
ATTAGCTCAATTCCCGGTGA+TGG - chr2_3:65403173-65403192 None:intergenic 45.0%
TGCAATTGCACACTTGGAAC+AGG - chr2_3:65403234-65403253 None:intergenic 45.0%
! CGCGCCAAAAGAAGATTTTC+CGG + chr2_3:65403260-65403279 Msa0306550:CDS 45.0%
GGAGAAACTGAGCCTACATA+AGG - chr2_3:65403377-65403396 None:intergenic 45.0%
AAGCATAAAACCAGGGCGAA+AGG + chr2_3:65403467-65403486 Msa0306550:three_prime_UTR 45.0%
TAACTTGGCAGATCGAGAAG+CGG + chr2_3:65403559-65403578 Msa0306550:three_prime_UTR 45.0%
TGCATATTTCGCTGTGATGC+CGG + chr2_3:65403606-65403625 Msa0306550:three_prime_UTR 45.0%
!! AAAAAAAAAAGTAAAAATTA+TGG + chr2_3:65398842-65398861 Msa0306550:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr2_3:65398942-65398961 Msa0306550:intron 5.0%
!!! TTTTAGTTTTTTATAATAAT+TGG + chr2_3:65399004-65399023 Msa0306550:intron 5.0%
GTTTGAGGAGAGAGGAGCTA+TGG - chr2_3:65397842-65397861 None:intergenic 50.0%
!! GGTTTGGTGTTTGAGGAGAG+AGG - chr2_3:65397850-65397869 None:intergenic 50.0%
GGATGAAGAGGAAGAAGAGG+AGG - chr2_3:65398018-65398037 None:intergenic 50.0%
GGAGGATGAAGAGGAAGAAG+AGG - chr2_3:65398021-65398040 None:intergenic 50.0%
AGAGATTCTTCGGCCTGTTG+TGG - chr2_3:65398213-65398232 None:intergenic 50.0%
CCGATGTTGGAGATCCTGAA+CGG - chr2_3:65398284-65398303 None:intergenic 50.0%
CCGTTCAGGATCTCCAACAT+CGG + chr2_3:65398281-65398300 Msa0306550:CDS 50.0%
! CCGTTGGTGGAGTTTGATGA+AGG + chr2_3:65398465-65398484 Msa0306550:CDS 50.0%
AGTTGTAGACGGAGACTTGC+TGG + chr2_3:65398495-65398514 Msa0306550:CDS 50.0%
TTGCTGGTCATAATCGGCGT+CGG + chr2_3:65398511-65398530 Msa0306550:CDS 50.0%
GCAGTAAGATCAGCGGGTAA+AGG - chr2_3:65399656-65399675 None:intergenic 50.0%
ATCCTTAGTTAACGGGGCAG+GGG - chr2_3:65399783-65399802 None:intergenic 50.0%
!! AGCAGGTGTTGATGGAGTTG+TGG - chr2_3:65399822-65399841 None:intergenic 50.0%
GAGGAGCCAAAAAGTTGCAG+CGG - chr2_3:65399962-65399981 None:intergenic 50.0%
!!! TTCGATGGGCTGTCGTTTTC+TGG - chr2_3:65399986-65400005 None:intergenic 50.0%
CGCGAAGATGGCAATTTCGA+TGG - chr2_3:65400001-65400020 None:intergenic 50.0%
GTCTTCATCTCCTCCTGTTG+TGG + chr2_3:65400069-65400088 Msa0306550:CDS 50.0%
! GGTTGGGATTTTGCAAACCC+TGG + chr2_3:65400345-65400364 Msa0306550:intron 50.0%
TTCTCCCAGTACGATCCTGT+AGG - chr2_3:65400479-65400498 None:intergenic 50.0%
AAGCATCCTAGCCATTTCCC+AGG + chr2_3:65400519-65400538 Msa0306550:CDS 50.0%
CACGTCTTTGCATCTGGTGA+AGG - chr2_3:65400637-65400656 None:intergenic 50.0%
TTGCACATGCGTATCCTTCC+TGG - chr2_3:65401232-65401251 None:intergenic 50.0%
GGATACGCATGTGCAAACCA+TGG + chr2_3:65401236-65401255 Msa0306550:CDS 50.0%
TCTCCTTTGGCAATTGTCGG+TGG + chr2_3:65401292-65401311 Msa0306550:CDS 50.0%
TGTCCACCGACAATTGCCAA+AGG - chr2_3:65401298-65401317 None:intergenic 50.0%
TTTGGCAATTGTCGGTGGAC+AGG + chr2_3:65401297-65401316 Msa0306550:CDS 50.0%
AGGATCAGGAGATCCTGGTA+TGG + chr2_3:65401499-65401518 Msa0306550:CDS 50.0%
CGGTCTCAACTCCTTGCAAA+TGG - chr2_3:65401795-65401814 None:intergenic 50.0%
!! ATTTTGGGAGGCCCAAGTCA+AGG + chr2_3:65401879-65401898 Msa0306550:CDS 50.0%
!! TTTTGGGAGGCCCAAGTCAA+GGG + chr2_3:65401880-65401899 Msa0306550:CDS 50.0%
CAAAGCCTCATCCCTTGACT+TGG - chr2_3:65401894-65401913 None:intergenic 50.0%
GAAGGAGAAGGGTTGTCAAC+AGG + chr2_3:65402085-65402104 Msa0306550:CDS 50.0%
GGTCATGCATGTCAGTCAAC+AGG + chr2_3:65402477-65402496 Msa0306550:intron 50.0%
CATGCATGTCAGTCAACAGG+GGG + chr2_3:65402480-65402499 Msa0306550:intron 50.0%
ATGCATGTCAGTCAACAGGG+GGG + chr2_3:65402481-65402500 Msa0306550:intron 50.0%
! CTGCCCGTTTTCATCCACAA+GGG - chr2_3:65403030-65403049 None:intergenic 50.0%
! TCTGCCCGTTTTCATCCACA+AGG - chr2_3:65403031-65403050 None:intergenic 50.0%
CTCATCATGGCATAGGCATG+TGG - chr2_3:65403056-65403075 None:intergenic 50.0%
! TGAGATAGAGCACCCATCAC+CGG + chr2_3:65403157-65403176 Msa0306550:CDS 50.0%
AGTCCCCAACTCGTTTGACT+TGG - chr2_3:65403211-65403230 None:intergenic 50.0%
TTCCGTGGAACCCCTTATGT+AGG + chr2_3:65403362-65403381 Msa0306550:CDS 50.0%
AGCCTACATAAGGGGTTCCA+CGG - chr2_3:65403367-65403386 None:intergenic 50.0%
TAGGCTCAGTTTCTCCCTTC+AGG + chr2_3:65403381-65403400 Msa0306550:CDS 50.0%
CTCAGTTTCTCCCTTCAGGT+GGG + chr2_3:65403385-65403404 Msa0306550:CDS 50.0%
TGAAGTTCATCCTTTCGCCC+TGG - chr2_3:65403480-65403499 None:intergenic 50.0%
GAAAACGCAGCCGGATGAAG+TGG + chr2_3:65398536-65398555 Msa0306550:CDS 55.0%
GCAGCAACCTGATTCAACGG+CGG - chr2_3:65398576-65398595 None:intergenic 55.0%
TCCTTAGTTAACGGGGCAGG+GGG - chr2_3:65399782-65399801 None:intergenic 55.0%
CCTGCTCAAAATGGCGGCAA+CGG + chr2_3:65399836-65399855 Msa0306550:CDS 55.0%
CTGCTCAAAATGGCGGCAAC+GGG + chr2_3:65399837-65399856 Msa0306550:CDS 55.0%
!!! TGGGCTGTCGTTTTCTGGAG+AGG - chr2_3:65399981-65400000 None:intergenic 55.0%
AGCGTTCCTGGGAAATGGCT+AGG - chr2_3:65400528-65400547 None:intergenic 55.0%
TTCGCAGCGTTCCTGGGAAA+TGG - chr2_3:65400533-65400552 None:intergenic 55.0%
TGTGCAAACCATGGGGAACG+TGG + chr2_3:65401245-65401264 Msa0306550:CDS 55.0%
GGAAGAAACCTCTCTGCTCC+TGG + chr2_3:65401340-65401359 Msa0306550:CDS 55.0%
ACTTTGTGCCAGGAGCAGAG+AGG - chr2_3:65401351-65401370 None:intergenic 55.0%
AGGGTTGTCAACAGGGTCAG+TGG + chr2_3:65402093-65402112 Msa0306550:CDS 55.0%
GCAAGGGAGTAATACCGCCA+GGG - chr2_3:65402258-65402277 None:intergenic 55.0%
TGCAAGGGAGTAATACCGCC+AGG - chr2_3:65402259-65402278 None:intergenic 55.0%
CCAAGCCTGTTAGGCACAAG+AGG - chr2_3:65402624-65402643 None:intergenic 55.0%
CCTCTTGTGCCTAACAGGCT+TGG + chr2_3:65402621-65402640 Msa0306550:intron 55.0%
!! GAAGTGCTGGGAAACCCTTG+TGG + chr2_3:65403013-65403032 Msa0306550:CDS 55.0%
! GAGATAGAGCACCCATCACC+GGG + chr2_3:65403158-65403177 Msa0306550:CDS 55.0%
! GATTTTCCGGTTCACGGAGC+TGG + chr2_3:65403273-65403292 Msa0306550:CDS 55.0%
GCTCAGTTTCTCCCTTCAGG+TGG + chr2_3:65403384-65403403 Msa0306550:CDS 55.0%
! CTGGTCATAATCGGCGTCGG+AGG + chr2_3:65398514-65398533 Msa0306550:CDS 60.0%
AACGCAGCCGGATGAAGTGG+CGG + chr2_3:65398539-65398558 Msa0306550:CDS 60.0%
CCTCCAACCGCCACTTCATC+CGG - chr2_3:65398549-65398568 None:intergenic 60.0%
AGGTTCGCCGCCGTTGAATC+AGG + chr2_3:65398566-65398585 Msa0306550:CDS 60.0%
CTTAGTTAACGGGGCAGGGG+GGG - chr2_3:65399780-65399799 None:intergenic 60.0%
CCTTAGTTAACGGGGCAGGG+GGG - chr2_3:65399781-65399800 None:intergenic 60.0%
!! CCGTTGCCGCCATTTTGAGC+AGG - chr2_3:65399839-65399858 None:intergenic 60.0%
GACGGCGACCTTTCATCCAC+AGG - chr2_3:65400052-65400071 None:intergenic 60.0%
CCTGTGTTCGCAGCGTTCCT+GGG - chr2_3:65400539-65400558 None:intergenic 60.0%
ACCTGTGTTCGCAGCGTTCC+TGG - chr2_3:65400540-65400559 None:intergenic 60.0%
GCAAACCATGGGGAACGTGG+AGG + chr2_3:65401248-65401267 Msa0306550:CDS 60.0%
GAGGCCCAAGTCAAGGGATG+AGG + chr2_3:65401886-65401905 Msa0306550:CDS 60.0%
GTGAAGCCAGCTCCGTGAAC+CGG - chr2_3:65403282-65403301 None:intergenic 60.0%
! GGTTCACGGAGCTGGCTTCA+CGG + chr2_3:65403281-65403300 Msa0306550:CDS 60.0%
TCGCTGTGATGCCGGAGTTG+AGG + chr2_3:65403614-65403633 Msa0306550:three_prime_UTR 60.0%
GCGTCGGAGGAAAACGCAGC+CGG + chr2_3:65398527-65398546 Msa0306550:CDS 65.0%
CAGCCGGATGAAGTGGCGGT+TGG + chr2_3:65398543-65398562 Msa0306550:CDS 65.0%
CCGGATGAAGTGGCGGTTGG+AGG + chr2_3:65398546-65398565 Msa0306550:CDS 65.0%
CCCCCCTGCCCCGTTAACTA+AGG + chr2_3:65399778-65399797 Msa0306550:CDS 65.0%
CCCAGGAACGCTGCGAACAC+AGG + chr2_3:65400536-65400555 Msa0306550:CDS 65.0%
GGAGACCTCCACGTTCCCCA+TGG - chr2_3:65401256-65401275 None:intergenic 65.0%
CCAGGGCCCTCAAGATTCGG+TGG - chr2_3:65402241-65402260 None:intergenic 65.0%
CCACCGAATCTTGAGGGCCC+TGG + chr2_3:65402238-65402257 Msa0306550:CDS 65.0%
CCGCCAGGGCCCTCAAGATT+CGG - chr2_3:65402244-65402263 None:intergenic 65.0%
CCGAATCTTGAGGGCCCTGG+CGG + chr2_3:65402241-65402260 Msa0306550:CDS 65.0%
!! GGGGCAGGGGGGGTGTTGTT+TGG - chr2_3:65399770-65399789 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 65397750 65404127 65397750 ID=Msa0306550;Name=Msa0306550
chr2_3 mRNA 65397750 65404127 65397750 ID=Msa0306550-mRNA-1;Parent=Msa0306550;Name=Msa0306550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=250|1|1|1|1|1|9|694|1006
chr2_3 exon 65397750 65398645 65397750 ID=Msa0306550-mRNA-1:exon:21785;Parent=Msa0306550-mRNA-1
chr2_3 exon 65399585 65400345 65399585 ID=Msa0306550-mRNA-1:exon:21786;Parent=Msa0306550-mRNA-1
chr2_3 exon 65400483 65400557 65400483 ID=Msa0306550-mRNA-1:exon:21787;Parent=Msa0306550-mRNA-1
chr2_3 exon 65400688 65400795 65400688 ID=Msa0306550-mRNA-1:exon:21788;Parent=Msa0306550-mRNA-1
chr2_3 exon 65400883 65401000 65400883 ID=Msa0306550-mRNA-1:exon:21789;Parent=Msa0306550-mRNA-1
chr2_3 exon 65401233 65401368 65401233 ID=Msa0306550-mRNA-1:exon:21790;Parent=Msa0306550-mRNA-1
chr2_3 exon 65401454 65401598 65401454 ID=Msa0306550-mRNA-1:exon:21791;Parent=Msa0306550-mRNA-1
chr2_3 exon 65401740 65402342 65401740 ID=Msa0306550-mRNA-1:exon:21792;Parent=Msa0306550-mRNA-1
chr2_3 exon 65403005 65404127 65403005 ID=Msa0306550-mRNA-1:exon:21793;Parent=Msa0306550-mRNA-1
chr2_3 five_prime_UTR 65397750 65397999 65397750 ID=Msa0306550-mRNA-1:five_prime_utr;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65398000 65398645 65398000 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65399585 65400345 65399585 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65400483 65400557 65400483 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65400688 65400795 65400688 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65400883 65401000 65400883 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65401233 65401368 65401233 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65401454 65401598 65401454 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65401740 65402342 65401740 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 CDS 65403005 65403433 65403005 ID=Msa0306550-mRNA-1:cds;Parent=Msa0306550-mRNA-1
chr2_3 three_prime_UTR 65403434 65404127 65403434 ID=Msa0306550-mRNA-1:three_prime_utr;Parent=Msa0306550-mRNA-1
Gene Sequence

>Msa0306550

ATGGAAAAAGTAGCTCCTCCTCTTCTTCCTCTTCATCCTCCTATGTTATCATCACATCAATTTTACGATTCATCAACCACCAAAAAACGTGATCTATTATCATCATACGACGTCGTTCACATCCAAAACGATAATTGGAACCCTAAAGAATGGAATTGGGACAGTATCCGTTTTATGACAGCAAAATCAACGACAACAACAACAGTAGAACCACAACAGGCCGAAGAATCTCTAAACTTAAATCTTGGAAGCACGGGACAAGTACGAGCAAACAAACGAATCCGTTCAGGATCTCCAACATCGGCTTCATATCCGATGTGTCAAGTTGATAACTGCAAAGAAGATCTATCAAAAGCGAAGGATTATCATCGACGTCATAAGGTGTGTGAAGCTCATAGTAAAGCTTCTAAGGCTTTGTTAGGGAATCAAATGCAACGGTTTTGTCAACAGTGTAGTAGGTTTCATCCGTTGGTGGAGTTTGATGAAGGAAAACGGAGTTGTAGACGGAGACTTGCTGGTCATAATCGGCGTCGGAGGAAAACGCAGCCGGATGAAGTGGCGGTTGGAGGTTCGCCGCCGTTGAATCAGGTTGCTGCTAATTTGGAGATTTTTAACTTGTTGACTGCTATTGCTGATGGTTCTCAAGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAAAGAACAGCTTGTACAAATTCTGAATAGGATCCCTTTACCCGCTGATCTTACTGCAAAATTGCTGGATGTTGGTAATAATTTGAATGCGAAAAATGATAATGTCCAAATGCAAACTTCACCCTCCTATCATCATCGCGATGATCAACCAAACAACACCCCCCCTGCCCCGTTAACTAAGGATTTTCTTGCTGTTCTTTCCACAACTCCATCAACACCTGCTCAAAATGGCGGCAACGGGTCCACAAGTAGTGCAGATCATATGAGAGAAAGAAGCAGTGGCAGTTCTCAGTCTCCAAATGATGATTCAGATTGCCAGGAGGATGTTCGAGTTAAATTGCCGCTGCAACTTTTTGGCTCCTCTCCAGAAAACGACAGCCCATCGAAATTGCCATCTTCGCGAAAGTATTTTTCATCGGAAAGTAGTAATCCTGTGGATGAAAGGTCGCCGTCTTCATCTCCTCCTGTTGTGGAGATGAATTTTGGTCTGCAAGGTAGTATTAGAGGTCTCAATTCTAATGGTATTTTGACTGGATTTGGAGGCCATGCAAATAAGGAAACTAGCCAAAGTCATAGTTGTACTACTATCCCTCTTGATCTCTTTAAAGGGTCAAAATCAAATAACATGATTCAACAATCTAGTTCAGTTCAAAGTGCACCATTTAAAGCTGGTTATGCATCTTCGGGTTCTGATTATTCACCTCCCAGTTTGAATTCAGATACTCAGGATCGTACTGGGAGAATAATGTTTAAATTGTTTGACAAGCATCCTAGCCATTTCCCAGGAACGCTGCGAACACAGATTTACAATTGGCTTTCTACACGACCATCAGACTTGGAGAGTTACATAAGGCCCGGCTGTGTTGTCCTATCAATTTATGCTTCAATGTCTTCTGCTGCTTGGGTGCAATTAGAAGAAAACTTCGTCCAACGTGTTGATTCTTTAATTCATAACTCAGATTCTGATTTCTGGAGAAATGGAAGATTTCTTGTTTATTCTGGCAGTCAGTTAGCATCACACAAAGATGGAAGGATACGCATGTGCAAACCATGGGGAACGTGGAGGTCTCCAGAGTTGATATCAGTGTCTCCTTTGGCAATTGTCGGTGGACAGGAGACTTCTATTTCATTGAAGGGAAGAAACCTCTCTGCTCCTGGCACAAAGATTCATTGCACTGATGCTGACTGTTATACATCATCAGAAGTTATAGGATCAGGAGATCCTGGTATGGTCTATGATGAGATAAAATTGAGTGGTTTTGAAGTTCAGAATACATCTCCTAGTGTTCTAGGTCGCTGTTTCATTGAGGTTGAAAATGGTTTCAAGGGAAACAGTTTTCCAGTGATAATAGCCAATGCATCCATTTGCAAGGAGTTGAGACCGCTTGAGTCTGAATTTGACGAGGATGAAAAGATGTGTGATGCCATTTCAGAGGAGCATGAACATAATTTTGGGAGGCCCAAGTCAAGGGATGAGGCTTTGCACTTTTTGAATGAGCTTGGTTGGCTGTTTCAAAGGGAAAGGTTCTCGAATGTGAACGAGGTTCCAGATTATTCGCTCGACAGGTTCAAATTTGTACTGACGTTTGCTGTGGAAAGAAACTGTTGCATGTTGGTCAAAACCCTTCTGGATAAGCTGGTTGATAAACACTTCGAAGGAGAAGGGTTGTCAACAGGGTCAGTGGAGATGCTGAAAGCAATCCAACTTCTAAATAGAGCAGTGAAAAGAAAGTGCACAAGCATGGTTGATTTGCTCATTAACTATTCTATAACTAGCAAAAATGACACATCCAAGAAATATGTATTTCCACCGAATCTTGAGGGCCCTGGCGGTATTACTCCCTTGCATTTGGCAGCATCTACAACGGATTCTGAGGGTGTAATTGACTCTTTAACAAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGAAACCCTTGTGGATGAAAACGGGCAGACTCCACATGCCTATGCCATGATGAGAAATAATCACTCTTATAATATGTTGGTTGCCCGTAAACGTTCCGATAGACAAAGAAGTGAAGTTTCAGTTAGAATTGATAATGAGATAGAGCACCCATCACCGGGAATTGAGCTAATGCAAAAGCGAATTAACCAAGTCAAACGAGTTGGGGACTCCTGTTCCAAGTGTGCAATTGCAGAAGTTCGCGCCAAAAGAAGATTTTCCGGTTCACGGAGCTGGCTTCACGGTCCCTTTATTCATTCGATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTATTCCGTGGAACCCCTTATGTAGGCTCAGTTTCTCCCTTCAGGTGGGAAAACTTGAATTATGGCACAATGTAA
Protein sequence

>Msa0306550

MEKVAPPLLPLHPPMLSSHQFYDSSTTKKRDLLSSYDVVHIQNDNWNPKEWNWDSIRFMTAKSTTTTTVEPQQAEESLNLNLGSTGQVRANKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGHNRRRRKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQVPDKEQLVQILNRIPLPADLTAKLLDVGNNLNAKNDNVQMQTSPSYHHRDDQPNNTPPAPLTKDFLAVLSTTPSTPAQNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLPSSRKYFSSESSNPVDERSPSSSPPVVEMNFGLQGSIRGLNSNGILTGFGGHANKETSQSHSCTTIPLDLFKGSKSNNMIQQSSSVQSAPFKAGYASSGSDYSPPSLNSDTQDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSTRPSDLESYIRPGCVVLSIYASMSSAAWVQLEENFVQRVDSLIHNSDSDFWRNGRFLVYSGSQLASHKDGRIRMCKPWGTWRSPELISVSPLAIVGGQETSISLKGRNLSAPGTKIHCTDADCYTSSEVIGSGDPGMVYDEIKLSGFEVQNTSPSVLGRCFIEVENGFKGNSFPVIIANASICKELRPLESEFDEDEKMCDAISEEHEHNFGRPKSRDEALHFLNELGWLFQRERFSNVNEVPDYSLDRFKFVLTFAVERNCCMLVKTLLDKLVDKHFEGEGLSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPLHLAASTTDSEGVIDSLTNDPQEIGLKCWETLVDENGQTPHAYAMMRNNHSYNMLVARKRSDRQRSEVSVRIDNEIEHPSPGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWLHGPFIHSMLAVAAVCVCVCVLFRGTPYVGSVSPFRWENLNYGTM*