Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109290 | XP_024626489.1 | 79.511 | 1064 | 170 | 11 | 30 | 1052 | 1 | 1057 | 0.0 | 1568 |
| Msa0109290 | XP_024626489.1 | 90.576 | 191 | 17 | 1 | 1130 | 1320 | 1068 | 1257 | 9.16e-99 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109290 | A0A072VGV5 | 79.511 | 1064 | 170 | 11 | 30 | 1052 | 1 | 1057 | 0.0 | 1568 |
| Msa0109290 | A0A072VGV5 | 90.576 | 191 | 17 | 1 | 1130 | 1320 | 1068 | 1257 | 4.38e-99 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0109290 | Msa0155520 | 0.813425 | 2.576340e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109290 | MtrunA17_Chr1g0166291 | 79.511 | 1064 | 170 | 11 | 30 | 1052 | 1 | 1057 | 0.0 | 1568 |
| Msa0109290 | MtrunA17_Chr1g0166291 | 90.576 | 191 | 17 | 1 | 1130 | 1320 | 1068 | 1257 | 8.43e-103 | 355 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 197 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCGAAAGCCTTAAGATTT+TGG | 0.090861 | 1_3:+21230810 | None:intergenic |
| CCTTCGAATGAATCAATTTC+AGG | 0.136727 | 1_3:+21234678 | None:intergenic |
| AGAGAAACTGCTTCAATTTC+AGG | 0.144731 | 1_3:+21231322 | None:intergenic |
| ACTGCTTCTTGTTTATCTTT+TGG | 0.152263 | 1_3:+21236577 | None:intergenic |
| ACATCTTTGGACAAAGATTT+TGG | 0.164476 | 1_3:+21235371 | None:intergenic |
| CCGACAGCTGGAACGGTATT+TGG | 0.177666 | 1_3:-21230722 | Msa0109290:intron |
| ATCACATGGAAAGCCGTTTA+TGG | 0.189786 | 1_3:-21236614 | None:intergenic |
| TATTCTTCCTGATTTATTAT+AGG | 0.195366 | 1_3:+21231133 | None:intergenic |
| TTCTGATGAACCATCGATTC+AGG | 0.219982 | 1_3:-21233307 | Msa0109290:CDS |
| ACATCTTCCACTTCAGCTTT+TGG | 0.236572 | 1_3:+21234885 | None:intergenic |
| AATTGAAAATGATGTATTAA+AGG | 0.242364 | 1_3:-21234544 | Msa0109290:CDS |
| ATCATTGCATAGGAAGATTC+TGG | 0.248745 | 1_3:+21231208 | None:intergenic |
| ACATCTATGTCATCGTTTAA+AGG | 0.254309 | 1_3:+21234438 | None:intergenic |
| AGCTTTCTCTTCAACGTCTT+TGG | 0.266962 | 1_3:+21234734 | None:intergenic |
| GCATCATTCGATTCAGCTAT+TGG | 0.268369 | 1_3:+21233948 | None:intergenic |
| ACATCAATATCATTGTTAAA+AGG | 0.272063 | 1_3:+21233357 | None:intergenic |
| CAAGTGATGTTTGGATTATC+AGG | 0.272548 | 1_3:+21230414 | None:intergenic |
| TGAAGAGAAAATTGTTACTA+TGG | 0.288677 | 1_3:-21230226 | Msa0109290:CDS |
| ACCCAAAATCTTAAGGCTTT+CGG | 0.289769 | 1_3:-21230812 | Msa0109290:CDS |
| CATGTTCACTAGTATCTTCT+AGG | 0.292171 | 1_3:+21234060 | None:intergenic |
| ATCTTTGTCCAAAGATGTTA+TGG | 0.311605 | 1_3:-21235366 | Msa0109290:CDS |
| ATAGTTGCATCTTCAATATT+CGG | 0.314249 | 1_3:+21234843 | None:intergenic |
| GGTTGTGGCCATGAAACTTT+TGG | 0.335062 | 1_3:+21231042 | None:intergenic |
| GAAGCAGTTTCTCTTATTGC+AGG | 0.337221 | 1_3:-21231313 | Msa0109290:CDS |
| ATTGAAAATGATGTATTAAA+GGG | 0.345107 | 1_3:-21234543 | Msa0109290:CDS |
| AAAGGTTATGATCAGGAAAT+AGG | 0.350625 | 1_3:-21234519 | Msa0109290:CDS |
| CCTTCGACTGATTCGGCATA+TGG | 0.360198 | 1_3:+21232929 | None:intergenic |
| GAAGATGAAGATAAAATTGT+TGG | 0.361313 | 1_3:-21233393 | Msa0109290:CDS |
| TTGTTGTTGTTGCCAATACT+TGG | 0.362848 | 1_3:+21232005 | None:intergenic |
| AACAATGATATTGATGTTCA+AGG | 0.362977 | 1_3:-21233351 | Msa0109290:CDS |
| AAAATTGAAACTATTTCAAT+AGG | 0.364901 | 1_3:-21235251 | Msa0109290:CDS |
| CTATCCAGCCATTCACTTCA+AGG | 0.367802 | 1_3:-21232215 | Msa0109290:CDS |
| TCATGAAAGTGACGTAAATA+TGG | 0.370828 | 1_3:-21234922 | Msa0109290:CDS |
| TCATGCAAGTGACAGAAGTA+TGG | 0.373078 | 1_3:-21233850 | Msa0109290:CDS |
| CGAGCTTGAAAGTGATTCAT+TGG | 0.373757 | 1_3:-21234961 | Msa0109290:CDS |
| CATTTCAACCCAAAATCTTA+AGG | 0.374331 | 1_3:-21230819 | Msa0109290:CDS |
| CTTCTTGTCTTGATTCAGTT+CGG | 0.380317 | 1_3:+21230355 | None:intergenic |
| AAGAAGCAATTGAGAAAGAA+AGG | 0.383115 | 1_3:-21230584 | Msa0109290:CDS |
| TCGATTCAGGGAAATTCATT+TGG | 0.391702 | 1_3:-21233294 | Msa0109290:CDS |
| TGAAAATGAGAATCAGCATT+TGG | 0.398342 | 1_3:+21232164 | None:intergenic |
| AAGCAGTATAGGAGCAATAA+TGG | 0.399852 | 1_3:-21236561 | Msa0109290:intron |
| TGCATCTGACAAGTGATGTT+TGG | 0.400511 | 1_3:+21230405 | None:intergenic |
| GAATATTGAAGATGCAACTA+TGG | 0.402406 | 1_3:-21234841 | Msa0109290:CDS |
| TTTGAGCATGGGCAAAGAAA+TGG | 0.407679 | 1_3:-21235623 | Msa0109290:CDS |
| TGATTGAAGAGACTTCATTA+AGG | 0.408571 | 1_3:+21232798 | None:intergenic |
| GATATCACAGTAGGGTCTAA+TGG | 0.409358 | 1_3:-21231406 | Msa0109290:CDS |
| CAAATACCGTTCCAGCTGTC+GGG | 0.412049 | 1_3:+21230723 | None:intergenic |
| TATGGTGCCTATAATAAATC+AGG | 0.415770 | 1_3:-21231140 | Msa0109290:CDS |
| AACAATTCTACATTTGCAAA+TGG | 0.420420 | 1_3:-21230486 | Msa0109290:CDS |
| GAAAATAAATTGAGCGAAAG+TGG | 0.424067 | 1_3:-21231517 | Msa0109290:CDS |
| AGATAAACAAGAAGCAGTAT+AGG | 0.424953 | 1_3:-21236572 | Msa0109290:CDS |
| TTGTCAAGTTCTTCAATTGA+AGG | 0.427408 | 1_3:-21232890 | Msa0109290:CDS |
| TAATGAAAGTGACATATATA+TGG | 0.427790 | 1_3:-21234649 | Msa0109290:CDS |
| GAAAGCTATAGGACTGGTTT+CGG | 0.427909 | 1_3:-21233514 | Msa0109290:CDS |
| GCTTGAAAGTGAGTATTCAT+TGG | 0.429019 | 1_3:-21235195 | Msa0109290:CDS |
| CAAGGTTGAAATTGATCCAT+TGG | 0.434656 | 1_3:-21233613 | Msa0109290:CDS |
| TACTGTGATATCATATGTAT+TGG | 0.436564 | 1_3:+21231417 | None:intergenic |
| TAATGAAAGTGGCATAGATA+TGG | 0.438197 | 1_3:-21233580 | Msa0109290:CDS |
| GATACATGTTCAACCATAAA+CGG | 0.438611 | 1_3:+21236601 | None:intergenic |
| GATGTTCAAGAGGAAGGTTC+AGG | 0.442410 | 1_3:-21234867 | Msa0109290:CDS |
| AACGATGACATAGATGTTCA+AGG | 0.445057 | 1_3:-21234432 | Msa0109290:CDS |
| GCTTGAAAGTGATTATTCAT+TGG | 0.446746 | 1_3:-21233880 | Msa0109290:CDS |
| ACATCTTTGGCCTCATCTGT+TGG | 0.448665 | 1_3:+21235026 | None:intergenic |
| GAAGATGCAACAACTGAACT+TGG | 0.449085 | 1_3:-21233762 | Msa0109290:CDS |
| AGAGCAGACCAAAAGTTTCA+TGG | 0.449147 | 1_3:-21231050 | Msa0109290:CDS |
| TAAGCAAGATCAATGCATAA+AGG | 0.450069 | 1_3:-21231467 | Msa0109290:CDS |
| AATTCATCCAAAAGCTGAAA+AGG | 0.451952 | 1_3:-21233820 | Msa0109290:CDS |
| TCAAATGATTCCAACGGATA+AGG | 0.452687 | 1_3:-21234757 | Msa0109290:CDS |
| GCCACAACCATGCTTAAATC+AGG | 0.457781 | 1_3:-21231028 | Msa0109290:CDS |
| ACATCTTTGACCTCATCTGT+TGG | 0.458996 | 1_3:+21233678 | None:intergenic |
| AAATGTGGTGTCCGGTCTCT+TGG | 0.461743 | 1_3:+21230837 | None:intergenic |
| TAACAATACTTGTTCAAAGA+TGG | 0.463325 | 1_3:-21230109 | Msa0109290:CDS |
| TTTATAGGGGAAGAAATGAA+TGG | 0.463355 | 1_3:-21232974 | Msa0109290:intron |
| GCTCTCACCTTCGACTGATT+CGG | 0.464539 | 1_3:+21232922 | None:intergenic |
| AAAGAATTTCTCAAAATCAA+TGG | 0.465527 | 1_3:+21234378 | None:intergenic |
| CTTGAAAATGATTTATCGAA+AGG | 0.466526 | 1_3:-21233474 | Msa0109290:CDS |
| TACATCAAATGAGTCAGAAC+AGG | 0.468557 | 1_3:-21232276 | Msa0109290:CDS |
| TCTGCTCTACATTTCCCTGC+TGG | 0.469329 | 1_3:+21231065 | None:intergenic |
| ACATCTTCAGCTTCATCAGT+TGG | 0.471509 | 1_3:+21234612 | None:intergenic |
| TTGAGCATGGGCAAAGAAAT+GGG | 0.473832 | 1_3:-21235622 | Msa0109290:CDS |
| AATGATGTATTAAAGGGAAA+AGG | 0.474772 | 1_3:-21234537 | Msa0109290:CDS |
| TGTTGTTGTTGCCAATACTT+GGG | 0.478593 | 1_3:+21232006 | None:intergenic |
| TCTGATGAACCATCGATTCA+GGG | 0.479455 | 1_3:-21233306 | Msa0109290:CDS |
| TGATCTTGCTTAGAATCTTG+TGG | 0.479810 | 1_3:+21231478 | None:intergenic |
| TGCAATGATAAAGAAATTTG+AGG | 0.480682 | 1_3:-21231194 | Msa0109290:CDS |
| AGAGCAATGCCATTCTGATA+TGG | 0.481443 | 1_3:-21231158 | Msa0109290:CDS |
| GATGTTGAAGATAAAGCTAT+AGG | 0.483047 | 1_3:-21233660 | Msa0109290:CDS |
| TGAATCAAGACAAGAAGAAT+CGG | 0.484023 | 1_3:-21230349 | Msa0109290:CDS |
| TGTGCCACAATTGACAAGCT+TGG | 0.484968 | 1_3:-21230974 | Msa0109290:CDS |
| GGAAATTCATTTGGTGGTGA+AGG | 0.486523 | 1_3:-21233285 | Msa0109290:intron |
| ACCTGATTTAAGCATGGTTG+TGG | 0.487494 | 1_3:+21231027 | None:intergenic |
| GATGATCATGAAATAGCTGC+AGG | 0.489088 | 1_3:-21233447 | Msa0109290:CDS |
| TTGGGTTGAAATGTGGTGTC+CGG | 0.493063 | 1_3:+21230829 | None:intergenic |
| CTTCCTACCTGATTTAAGCA+TGG | 0.494999 | 1_3:+21231021 | None:intergenic |
| AGAAGCAATTGAGAAAGAAA+GGG | 0.495359 | 1_3:-21230583 | Msa0109290:CDS |
| TCATGCAAGTGGTACAGATA+TGG | 0.496480 | 1_3:-21235162 | Msa0109290:CDS |
| ACGTCTTTGGCCTTATCCGT+TGG | 0.497358 | 1_3:+21234747 | None:intergenic |
| CCTGAAATTGATTCATTCGA+AGG | 0.499603 | 1_3:-21234678 | Msa0109290:CDS |
| CAAATGGTGGTTATGAAACA+AGG | 0.500081 | 1_3:-21230470 | Msa0109290:CDS |
| TCAGTGCCTCATGATGAGTA+TGG | 0.502689 | 1_3:-21230255 | Msa0109290:CDS |
| ATTCAGGGAAATTCATTTGG+TGG | 0.506085 | 1_3:-21233291 | Msa0109290:CDS |
| GCAACATCCTCTTCAGCTGT+TGG | 0.506191 | 1_3:+21235125 | None:intergenic |
| AAAGGGAAAAGGTTATGATC+AGG | 0.509520 | 1_3:-21234526 | Msa0109290:CDS |
| CTTGAAAGTGATTCATTGGA+AGG | 0.509641 | 1_3:-21234957 | Msa0109290:CDS |
| GGATTTGGAGATTTGAGCAT+GGG | 0.509995 | 1_3:-21235634 | Msa0109290:CDS |
| TTTCTGAACCACCGAGAGAT+CGG | 0.510422 | 1_3:+21230774 | None:intergenic |
| ATATCTAAAGCTTCGTTCGT+TGG | 0.510865 | 1_3:-21230186 | Msa0109290:CDS |
| AGAAGCAGCTTCACTGATAG+TGG | 0.511751 | 1_3:-21230541 | Msa0109290:CDS |
| TCTCGAGACTCCCCGACAGC+TGG | 0.512920 | 1_3:-21230734 | Msa0109290:CDS |
| TCATTAGTATCTCCTTCCAA+TGG | 0.513580 | 1_3:+21233597 | None:intergenic |
| TGAGGAGAAAGCTAAAGGAT+TGG | 0.514538 | 1_3:-21233790 | Msa0109290:CDS |
| ATCATATGTATTGGCCATGT+CGG | 0.520487 | 1_3:+21231426 | None:intergenic |
| TTCTGAACCACCGAGAGATC+GGG | 0.520899 | 1_3:+21230775 | None:intergenic |
| AGTGATATGAAAATTGAACT+TGG | 0.521212 | 1_3:-21235323 | Msa0109290:CDS |
| GCATATCTATAAATACCAGC+AGG | 0.522867 | 1_3:-21231080 | Msa0109290:CDS |
| TTCACACTATATTGAAAGCA+AGG | 0.523062 | 1_3:-21233631 | Msa0109290:CDS |
| AATGCATCCAAAAGCTGAAG+TGG | 0.523497 | 1_3:-21234892 | Msa0109290:CDS |
| GACATGGTGTCCCGATCTCT+CGG | 0.524228 | 1_3:-21230785 | Msa0109290:CDS |
| GATGTTGAGGAGAAAGCTAA+AGG | 0.525424 | 1_3:-21233795 | Msa0109290:CDS |
| AATTCTACATTTGCAAATGG+TGG | 0.527425 | 1_3:-21230483 | Msa0109290:CDS |
| AGCTGAAAAGGAAGATGTTG+AGG | 0.528213 | 1_3:-21233808 | Msa0109290:CDS |
| TCTCAAGAAGATAAACAAGA+TGG | 0.530922 | 1_3:-21234474 | Msa0109290:CDS |
| AATGCATCCAACAGCTGAAG+AGG | 0.532756 | 1_3:-21235132 | Msa0109290:CDS |
| GATGTTGAGGAGAAAGCTAT+AGG | 0.534107 | 1_3:-21233525 | Msa0109290:CDS |
| GGAGTCTCGAGAGCAACAAC+GGG | 0.536250 | 1_3:+21230745 | None:intergenic |
| CGGAGGTTGAGATTGAAGCT+TGG | 0.536638 | 1_3:+21230375 | None:intergenic |
| ATTGCCTTGAAGTGAATGGC+TGG | 0.536724 | 1_3:+21232211 | None:intergenic |
| GTTGAAATTGATCCATTGGA+AGG | 0.538446 | 1_3:-21233609 | Msa0109290:CDS |
| AATGAATTTCCCTGAATCGA+TGG | 0.540745 | 1_3:+21233297 | None:intergenic |
| ATCCAGGATCACCAAGAGAC+CGG | 0.541341 | 1_3:-21230848 | Msa0109290:intron |
| CAACAATGGAGAAAATTTCA+AGG | 0.542664 | 1_3:-21231988 | Msa0109290:intron |
| ATTGTTTGAACTTAATTCAG+TGG | 0.543504 | 1_3:+21230503 | None:intergenic |
| AATACATATGATATCACAGT+AGG | 0.544931 | 1_3:-21231415 | Msa0109290:CDS |
| ATTCATTGCCTTGAAGTGAA+TGG | 0.546113 | 1_3:+21232207 | None:intergenic |
| GAAGGAGATACTAATGAAAG+TGG | 0.547344 | 1_3:-21233591 | Msa0109290:CDS |
| GTGTCATCTACTTCACCTAA+AGG | 0.547589 | 1_3:-21230075 | Msa0109290:CDS |
| CAAAAGTCAGATGGAAGAGA+TGG | 0.549084 | 1_3:-21232080 | Msa0109290:CDS |
| CCAAATACCGTTCCAGCTGT+CGG | 0.551035 | 1_3:+21230722 | None:intergenic |
| AAATTTCTTTATCATTGCAT+AGG | 0.553751 | 1_3:+21231198 | None:intergenic |
| GATGTTGAGGAGAAAGCTGT+AGG | 0.554855 | 1_3:-21234594 | Msa0109290:CDS |
| CAGGAACCACAGAAGTATCA+AGG | 0.556349 | 1_3:+21231341 | None:intergenic |
| ATGGCCAAGCTTGTCAATTG+TGG | 0.567580 | 1_3:+21230970 | None:intergenic |
| TCTTGATTGCACACATGACA+AGG | 0.567651 | 1_3:-21231275 | Msa0109290:CDS |
| CTTGTCTTGATTCAGTTCGG+AGG | 0.568795 | 1_3:+21230358 | None:intergenic |
| GTTGAGGAGAAAGCTGTAGG+AGG | 0.571014 | 1_3:-21234591 | Msa0109290:CDS |
| TTGAGGAGAAAGCTGTAGGA+GGG | 0.575561 | 1_3:-21234590 | Msa0109290:CDS |
| TTCATCAGAAGAAGCCAAGA+TGG | 0.575604 | 1_3:+21233320 | None:intergenic |
| GGGAGTCTCGAGAGCAACAA+CGG | 0.580719 | 1_3:+21230744 | None:intergenic |
| TTATGTCCGCAAAAGTCAGA+TGG | 0.580735 | 1_3:-21232089 | Msa0109290:CDS |
| TAAGGCTTTCGGAGGAGACA+TGG | 0.581347 | 1_3:-21230801 | Msa0109290:CDS |
| AATAACACTTCTGCTATCAA+AGG | 0.583032 | 1_3:-21235595 | Msa0109290:intron |
| TCTGAAGACTTATCAAGCAA+TGG | 0.583115 | 1_3:+21230318 | None:intergenic |
| TTATAGGCACCATATCAGAA+TGG | 0.585003 | 1_3:+21231149 | None:intergenic |
| TTGTTCAAAGATGGAAGTGA+AGG | 0.585020 | 1_3:-21230100 | Msa0109290:CDS |
| GTGGAAGATGTTCAAGAGGA+AGG | 0.586720 | 1_3:-21234873 | Msa0109290:CDS |
| TCAAATTATTCCAACAGATG+AGG | 0.587928 | 1_3:-21235036 | Msa0109290:CDS |
| AGAGGCTCATGTTCTAGTCA+TGG | 0.589691 | 1_3:-21230145 | Msa0109290:CDS |
| AGATGATAGCTTGTCAAACA+AGG | 0.589755 | 1_3:-21230298 | Msa0109290:CDS |
| AGAAAGCCACGGTGATGATG+TGG | 0.590301 | 1_3:-21235069 | Msa0109290:CDS |
| AGACTCCCCGACAGCTGGAA+CGG | 0.592227 | 1_3:-21230729 | Msa0109290:CDS |
| GCTGCAGGGTTGAGTTCTGA+TGG | 0.593083 | 1_3:-21233432 | Msa0109290:CDS |
| TAATGTCCTTGATACTTCTG+TGG | 0.593110 | 1_3:-21231347 | Msa0109290:CDS |
| ATGCTTATGAGAAAGCTACA+TGG | 0.595416 | 1_3:-21233929 | Msa0109290:CDS |
| GTTGTTGTTGCCAATACTTG+GGG | 0.597201 | 1_3:+21232007 | None:intergenic |
| TGAAGTGGAAGATGTTCAAG+AGG | 0.598165 | 1_3:-21234877 | Msa0109290:CDS |
| GGGTCTAATGGAGACTGCAA+TGG | 0.599019 | 1_3:-21231394 | Msa0109290:CDS |
| TGAGGAGAAAGCTATAGGAC+TGG | 0.606020 | 1_3:-21233520 | Msa0109290:CDS |
| AGGATTTGGAGATTTGAGCA+TGG | 0.606590 | 1_3:-21235635 | Msa0109290:CDS |
| AAATACCGTTCCAGCTGTCG+GGG | 0.609455 | 1_3:+21230724 | None:intergenic |
| GCATCATGAGCATCTTCTTG+AGG | 0.610734 | 1_3:+21234002 | None:intergenic |
| GAGAAGTCAAATGATTCCAA+CGG | 0.614312 | 1_3:-21234763 | Msa0109290:CDS |
| GAAGAAGATGCTCATGCAAG+TGG | 0.614702 | 1_3:-21235173 | Msa0109290:CDS |
| GGTACGCGGTTTGATTCTAA+CGG | 0.620169 | 1_3:-21235230 | Msa0109290:CDS |
| CAAAATCTTAAGGCTTTCGG+AGG | 0.622089 | 1_3:-21230809 | Msa0109290:CDS |
| TGATGAAGCTGAAGATGTTG+AGG | 0.624189 | 1_3:-21233538 | Msa0109290:CDS |
| TGATGAAGCTGAAGATGTTG+AGG | 0.624189 | 1_3:-21234607 | Msa0109290:CDS |
| CCATATGCCGAATCAGTCGA+AGG | 0.632461 | 1_3:-21232929 | Msa0109290:CDS |
| TCAAATGATTCCAACAGATG+AGG | 0.632582 | 1_3:-21233688 | Msa0109290:CDS |
| AGTATTGGCAACAACAACAA+TGG | 0.643813 | 1_3:-21232002 | Msa0109290:CDS |
| TGAGGAGAAAGCTGTAGGAG+GGG | 0.644470 | 1_3:-21234589 | Msa0109290:CDS |
| CATATCTATAAATACCAGCA+GGG | 0.645811 | 1_3:-21231079 | Msa0109290:CDS |
| ATACATATGATATCACAGTA+GGG | 0.650083 | 1_3:-21231414 | Msa0109290:CDS |
| ATGATCATGAAATAGCTGCA+GGG | 0.655325 | 1_3:-21233446 | Msa0109290:CDS |
| ATGAGACCATACTCATCATG+AGG | 0.664138 | 1_3:+21230249 | None:intergenic |
| TCAAGAGTACAAGTCCGACA+TGG | 0.668203 | 1_3:-21231440 | Msa0109290:CDS |
| CTTGATTGCACACATGACAA+GGG | 0.676782 | 1_3:-21231274 | Msa0109290:CDS |
| GAAAAGAAAAGCGCAAATTG+CGG | 0.678461 | 1_3:-21230053 | Msa0109290:CDS |
| TTGTTGTTGCCAATACTTGG+GGG | 0.678840 | 1_3:+21232008 | None:intergenic |
| GAAGTCTCTTCAATCAAACA+AGG | 0.681501 | 1_3:-21232791 | Msa0109290:intron |
| CAACCATGCTTAAATCAGGT+AGG | 0.685151 | 1_3:-21231024 | Msa0109290:CDS |
| AAACAAGGGAGAGTGTAACA+AGG | 0.685981 | 1_3:-21230455 | Msa0109290:CDS |
| AAACTATTTCAATAGGTACG+CGG | 0.689286 | 1_3:-21235244 | Msa0109290:CDS |
| AAATGGTGGTTATGAAACAA+GGG | 0.692406 | 1_3:-21230469 | Msa0109290:CDS |
| TCTCTTCCACATCATCACCG+TGG | 0.708096 | 1_3:+21235063 | None:intergenic |
| ATGGTGTCCCGATCTCTCGG+TGG | 0.717382 | 1_3:-21230782 | Msa0109290:CDS |
| GCAAGAAGAAGAAAGTTGCG+AGG | 0.719423 | 1_3:-21234799 | Msa0109290:CDS |
| TCGCTGCAAGAAGAAAGCCA+CGG | 0.754584 | 1_3:-21235080 | Msa0109290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAAGCATTTTAATA+AGG | - | chr1_3:21230354-21230373 | Msa0109290:CDS | 10.0% |
| !!! | TATAATTTTTTGTTTAAACT+AGG | - | chr1_3:21234808-21234827 | Msa0109290:CDS | 10.0% |
| !!! | ATTAATTTGTTTATCAAAAT+AGG | - | chr1_3:21235063-21235082 | Msa0109290:CDS | 10.0% |
| !!! | TTAATTTGTTTATCAAAATA+GGG | - | chr1_3:21235064-21235083 | Msa0109290:CDS | 10.0% |
| !!! | TTTAATTTTTACTTTGTATT+TGG | - | chr1_3:21235687-21235706 | Msa0109290:intron | 10.0% |
| !!! | TTAATTTTTACTTTGTATTT+GGG | - | chr1_3:21235688-21235707 | Msa0109290:intron | 10.0% |
| !! | AATAGTTCAAGATATATTAA+AGG | + | chr1_3:21230750-21230769 | None:intergenic | 15.0% |
| !! | AAAATTGAAACTATTTCAAT+AGG | - | chr1_3:21231363-21231382 | Msa0109290:CDS | 15.0% |
| !! | AATTGAAAATGATGTATTAA+AGG | - | chr1_3:21232070-21232089 | Msa0109290:CDS | 15.0% |
| !! | ATTGAAAATGATGTATTAAA+GGG | - | chr1_3:21232071-21232090 | Msa0109290:CDS | 15.0% |
| !! | AAAGAGAAATAAATAGTTAA+GGG | - | chr1_3:21232439-21232458 | Msa0109290:intron | 15.0% |
| !! | AATGTTAACAATTCAATATA+TGG | - | chr1_3:21235995-21236014 | Msa0109290:intron | 15.0% |
| !!! | TTTTTTAAAAGAAGAAAAAG+AGG | - | chr1_3:21236451-21236470 | Msa0109290:intron | 15.0% |
| !!! | TATATGTTCAATTACTTTTC+AGG | - | chr1_3:21230502-21230521 | Msa0109290:CDS | 20.0% |
| !! | AATATCATCATCAATAATCA+TGG | - | chr1_3:21230670-21230689 | Msa0109290:intron | 20.0% |
| !!! | AATTTTCATATCACTAGAAA+TGG | + | chr1_3:21231286-21231305 | None:intergenic | 20.0% |
| !! | TAATGAAAGTGACATATATA+TGG | - | chr1_3:21231965-21231984 | Msa0109290:intron | 20.0% |
| !! | AAAGAATTTCTCAAAATCAA+TGG | + | chr1_3:21232239-21232258 | None:intergenic | 20.0% |
| !!! | TTGATTTTGAGAAATTCTTT+TGG | - | chr1_3:21232239-21232258 | Msa0109290:CDS | 20.0% |
| !!! | CTTAACTATTTATTTCTCTT+TGG | + | chr1_3:21232440-21232459 | None:intergenic | 20.0% |
| !! | CAAAGAGAAATAAATAGTTA+AGG | - | chr1_3:21232438-21232457 | Msa0109290:intron | 20.0% |
| !! | ACATCAATATCATTGTTAAA+AGG | + | chr1_3:21233260-21233279 | None:intergenic | 20.0% |
| !!! | AGAAATTTTGTTACTTATGA+TGG | + | chr1_3:21233523-21233542 | None:intergenic | 20.0% |
| !! | TCATAAGTAACAAAATTTCT+TGG | - | chr1_3:21233523-21233542 | Msa0109290:CDS | 20.0% |
| !!! | TATTTGTGATTCTGTTTTAT+AGG | - | chr1_3:21233625-21233644 | Msa0109290:CDS | 20.0% |
| !!! | ATTTGTGATTCTGTTTTATA+GGG | - | chr1_3:21233626-21233645 | Msa0109290:CDS | 20.0% |
| !! | ATGTTTCAACAATTAAATCT+AGG | + | chr1_3:21234182-21234201 | None:intergenic | 20.0% |
| !! | AACATCATTAGATTTCAATT+TGG | - | chr1_3:21234197-21234216 | Msa0109290:intron | 20.0% |
| !!! | TTTAATATAAGTTTTCCATG+AGG | + | chr1_3:21234943-21234962 | None:intergenic | 20.0% |
| !! | ATTAGAGGTTATGTATTATA+AGG | + | chr1_3:21235010-21235029 | None:intergenic | 20.0% |
| !! | AAATTTCTTTATCATTGCAT+AGG | + | chr1_3:21235419-21235438 | None:intergenic | 20.0% |
| !! | TATTCTTCCTGATTTATTAT+AGG | + | chr1_3:21235484-21235503 | None:intergenic | 20.0% |
| !! | TCTTTTGTGTTTGCAAAAAA+GGG | - | chr1_3:21230118-21230137 | Msa0109290:CDS | 25.0% |
| ! | TTAAATTATGGCATGAATGA+TGG | + | chr1_3:21230154-21230173 | None:intergenic | 25.0% |
| ! | ATCATTCATGCCATAATTTA+AGG | - | chr1_3:21230153-21230172 | Msa0109290:CDS | 25.0% |
| ! | TCATTCATGCCATAATTTAA+GGG | - | chr1_3:21230154-21230173 | Msa0109290:CDS | 25.0% |
| !! | TTTTAAATTAGCACAAGACA+CGG | + | chr1_3:21230343-21230362 | None:intergenic | 25.0% |
| ! | TTCTCAATAATCTAAGAGAA+TGG | + | chr1_3:21230444-21230463 | None:intergenic | 25.0% |
| ! | ATAAAGCAACACCATATTAT+TGG | - | chr1_3:21230568-21230587 | Msa0109290:CDS | 25.0% |
| ! | CACAAAAACACATAAAATAG+CGG | + | chr1_3:21230930-21230949 | None:intergenic | 25.0% |
| ! | TTTAACATTGCTTAAATTGC+AGG | - | chr1_3:21230959-21230978 | Msa0109290:intron | 25.0% |
| !!! | TTATTTGCCATTTTTTGTAG+AGG | - | chr1_3:21231128-21231147 | Msa0109290:CDS | 25.0% |
| ! | TTATCTTCCTCTACAAAAAA+TGG | + | chr1_3:21231138-21231157 | None:intergenic | 25.0% |
| ! | AGTGATATGAAAATTGAACT+TGG | - | chr1_3:21231291-21231310 | Msa0109290:CDS | 25.0% |
| !! | ATCTTTTTCTTCAACATCTT+TGG | + | chr1_3:21231604-21231623 | None:intergenic | 25.0% |
| ! | ATAGTTGCATCTTCAATATT+CGG | + | chr1_3:21231774-21231793 | None:intergenic | 25.0% |
| ! | AATGATGTATTAAAGGGAAA+AGG | - | chr1_3:21232077-21232096 | Msa0109290:CDS | 25.0% |
| !!! | ATTTTGAGAAATTCTTTTGG+TGG | - | chr1_3:21232242-21232261 | Msa0109290:CDS | 25.0% |
| ! | CTTGAAAATGATTTATCGAA+AGG | - | chr1_3:21233140-21233159 | Msa0109290:intron | 25.0% |
| ! | GAAGATGAAGATAAAATTGT+TGG | - | chr1_3:21233221-21233240 | Msa0109290:intron | 25.0% |
| ! | AACAATGATATTGATGTTCA+AGG | - | chr1_3:21233263-21233282 | Msa0109290:intron | 25.0% |
| !! | ACTTATGATGGAATTTCTTT+CGG | + | chr1_3:21233511-21233530 | None:intergenic | 25.0% |
| !! | TTTGTGATTCTGTTTTATAG+GGG | - | chr1_3:21233627-21233646 | Msa0109290:CDS | 25.0% |
| ! | ACTTATTCGAACTTATTTAC+TGG | - | chr1_3:21233931-21233950 | Msa0109290:CDS | 25.0% |
| ! | TTCTATAAACTCTCAAGAAT+AGG | - | chr1_3:21234031-21234050 | Msa0109290:CDS | 25.0% |
| !! | TTAATCTCTTTTCATTGTCT+TGG | - | chr1_3:21234260-21234279 | Msa0109290:intron | 25.0% |
| !! | TGGTTTTCTAAACTTAAAGA+TGG | + | chr1_3:21234899-21234918 | None:intergenic | 25.0% |
| ! | TACTGTGATATCATATGTAT+TGG | + | chr1_3:21235200-21235219 | None:intergenic | 25.0% |
| ! | AATACATATGATATCACAGT+AGG | - | chr1_3:21235199-21235218 | Msa0109290:CDS | 25.0% |
| ! | ATACATATGATATCACAGTA+GGG | - | chr1_3:21235200-21235219 | Msa0109290:CDS | 25.0% |
| ! | TGCAATGATAAAGAAATTTG+AGG | - | chr1_3:21235420-21235439 | Msa0109290:CDS | 25.0% |
| ! | ATGTTGTTAGAAAGTAAACA+TGG | + | chr1_3:21235666-21235685 | None:intergenic | 25.0% |
| !! | ATTTTTACTTTGTATTTGGG+TGG | - | chr1_3:21235691-21235710 | Msa0109290:intron | 25.0% |
| ! | ATTGTTTGAACTTAATTCAG+TGG | + | chr1_3:21236114-21236133 | None:intergenic | 25.0% |
| ! | AACAATTCTACATTTGCAAA+TGG | - | chr1_3:21236128-21236147 | Msa0109290:intron | 25.0% |
| ! | TGAAGAGAAAATTGTTACTA+TGG | - | chr1_3:21236388-21236407 | Msa0109290:intron | 25.0% |
| ! | TAACAATACTTGTTCAAAGA+TGG | - | chr1_3:21236505-21236524 | Msa0109290:intron | 25.0% |
| GATACATGTTCAACCATAAA+CGG | + | chr1_3:21230016-21230035 | None:intergenic | 30.0% | |
| !! | TGCTTCTTGTTTATCTTTTG+GGG | + | chr1_3:21230038-21230057 | None:intergenic | 30.0% |
| !! | CTGCTTCTTGTTTATCTTTT+GGG | + | chr1_3:21230039-21230058 | None:intergenic | 30.0% |
| !! | ACTGCTTCTTGTTTATCTTT+TGG | + | chr1_3:21230040-21230059 | None:intergenic | 30.0% |
| AGATAAACAAGAAGCAGTAT+AGG | - | chr1_3:21230042-21230061 | Msa0109290:CDS | 30.0% | |
| CAAACACAAAAGAGAAAACT+TGG | + | chr1_3:21230111-21230130 | None:intergenic | 30.0% | |
| ! | CTCTTTTGTGTTTGCAAAAA+AGG | - | chr1_3:21230117-21230136 | Msa0109290:CDS | 30.0% |
| AATTGAATGTAACATGTGCT+TGG | + | chr1_3:21230261-21230280 | None:intergenic | 30.0% | |
| GAGCAAATAATGTTCACTTT+CGG | + | chr1_3:21230418-21230437 | None:intergenic | 30.0% | |
| TATTGAGAATTCATGACCAA+AGG | - | chr1_3:21230455-21230474 | Msa0109290:CDS | 30.0% | |
| ! | TTATGCATAAGCCTCATTTT+GGG | + | chr1_3:21230552-21230571 | None:intergenic | 30.0% |
| ! | TTTATGCATAAGCCTCATTT+TGG | + | chr1_3:21230553-21230572 | None:intergenic | 30.0% |
| GATTTGAACAGCCAATAATA+TGG | + | chr1_3:21230582-21230601 | None:intergenic | 30.0% | |
| CAAATCAAGTATAAACACTC+TGG | - | chr1_3:21230596-21230615 | Msa0109290:intron | 30.0% | |
| TGTCCCAAATGTTTAAATCT+AGG | - | chr1_3:21230639-21230658 | Msa0109290:intron | 30.0% | |
| GCTCCTAGATTTAAACATTT+GGG | + | chr1_3:21230645-21230664 | None:intergenic | 30.0% | |
| TGCTCCTAGATTTAAACATT+TGG | + | chr1_3:21230646-21230665 | None:intergenic | 30.0% | |
| CATCATCAATAATCATGGTA+TGG | - | chr1_3:21230675-21230694 | Msa0109290:intron | 30.0% | |
| CAATAATCATGGTATGGTAA+TGG | - | chr1_3:21230681-21230700 | Msa0109290:intron | 30.0% | |
| TTGTTAAATAGCGACTATAG+AGG | - | chr1_3:21230868-21230887 | Msa0109290:intron | 30.0% | |
| ATTGCTTAAATTGCAGGATT+TGG | - | chr1_3:21230965-21230984 | Msa0109290:intron | 30.0% | |
| AATAACACTTCTGCTATCAA+AGG | - | chr1_3:21231019-21231038 | Msa0109290:CDS | 30.0% | |
| ! | ACATCTTTGGACAAAGATTT+TGG | + | chr1_3:21231246-21231265 | None:intergenic | 30.0% |
| ATCTTTGTCCAAAGATGTTA+TGG | - | chr1_3:21231248-21231267 | Msa0109290:CDS | 30.0% | |
| !! | AGCTTTTTCCATAACATCTT+TGG | + | chr1_3:21231259-21231278 | None:intergenic | 30.0% |
| AAACTATTTCAATAGGTACG+CGG | - | chr1_3:21231370-21231389 | Msa0109290:CDS | 30.0% | |
| TCAAATTATTCCAACAGATG+AGG | - | chr1_3:21231578-21231597 | Msa0109290:intron | 30.0% | |
| TCATGAAAGTGACGTAAATA+TGG | - | chr1_3:21231692-21231711 | Msa0109290:intron | 30.0% | |
| GAATATTGAAGATGCAACTA+TGG | - | chr1_3:21231773-21231792 | Msa0109290:intron | 30.0% | |
| AAAGGTTATGATCAGGAAAT+AGG | - | chr1_3:21232095-21232114 | Msa0109290:CDS | 30.0% | |
| TCTCAAGAAGATAAACAAGA+TGG | - | chr1_3:21232140-21232159 | Msa0109290:CDS | 30.0% | |
| ACATCTATGTCATCGTTTAA+AGG | + | chr1_3:21232179-21232198 | None:intergenic | 30.0% | |
| AGATGTTCAAGGAAAAACTA+CGG | - | chr1_3:21232193-21232212 | Msa0109290:CDS | 30.0% | |
| GCTTGAAAGTGATTATTCAT+TGG | - | chr1_3:21232734-21232753 | Msa0109290:intron | 30.0% | |
| AATTCATCCAAAAGCTGAAA+AGG | - | chr1_3:21232794-21232813 | Msa0109290:CDS | 30.0% | |
| GATGTTGAAGATAAAGCTAT+AGG | - | chr1_3:21232954-21232973 | Msa0109290:CDS | 30.0% | |
| TTCACACTATATTGAAAGCA+AGG | - | chr1_3:21232983-21233002 | Msa0109290:intron | 30.0% | |
| TAATGAAAGTGGCATAGATA+TGG | - | chr1_3:21233034-21233053 | Msa0109290:intron | 30.0% | |
| GTTCAACAAAACATTAACCA+CGG | - | chr1_3:21233405-21233424 | Msa0109290:CDS | 30.0% | |
| !!! | TAGTTTTATTGATAAAGCCG+TGG | + | chr1_3:21233425-21233444 | None:intergenic | 30.0% |
| CATTCTATTCATTTCTCTCT+CGG | + | chr1_3:21233463-21233482 | None:intergenic | 30.0% | |
| ACAAAATTTCTTGGTTGTGT+TGG | - | chr1_3:21233532-21233551 | Msa0109290:CDS | 30.0% | |
| TGTGTAAACGACAAGTAAAA+AGG | - | chr1_3:21233557-21233576 | Msa0109290:CDS | 30.0% | |
| GACAAGTAAAAAGGAATGAA+GGG | - | chr1_3:21233566-21233585 | Msa0109290:CDS | 30.0% | |
| TTTATAGGGGAAGAAATGAA+TGG | - | chr1_3:21233640-21233659 | Msa0109290:CDS | 30.0% | |
| TTGTCAAGTTCTTCAATTGA+AGG | - | chr1_3:21233724-21233743 | Msa0109290:CDS | 30.0% | |
| TGATTGAAGAGACTTCATTA+AGG | + | chr1_3:21233819-21233838 | None:intergenic | 30.0% | |
| ATACTTGAAAGATTCCAGAT+CGG | - | chr1_3:21233892-21233911 | Msa0109290:CDS | 30.0% | |
| AAGCATTTGTGAAACTGTTT+AGG | - | chr1_3:21233957-21233976 | Msa0109290:CDS | 30.0% | |
| ! | CAATTAAATCTAGGCTTGTT+TGG | + | chr1_3:21234173-21234192 | None:intergenic | 30.0% |
| !! | AGAAACGTCAGTTTTAACAT+TGG | - | chr1_3:21234305-21234324 | Msa0109290:intron | 30.0% |
| TGAAAATGAGAATCAGCATT+TGG | + | chr1_3:21234453-21234472 | None:intergenic | 30.0% | |
| ! | TTTTCAACAGTTGAAACATG+AGG | - | chr1_3:21234467-21234486 | Msa0109290:CDS | 30.0% |
| TGAGGTTTCAGAAAAAGATA+TGG | - | chr1_3:21234485-21234504 | Msa0109290:CDS | 30.0% | |
| CAACAATGGAGAAAATTTCA+AGG | - | chr1_3:21234626-21234645 | Msa0109290:CDS | 30.0% | |
| ACAAATAAGTCAATCCAAAC+AGG | + | chr1_3:21234661-21234680 | None:intergenic | 30.0% | |
| AGACTATTTGAGAGAGTTTA+TGG | - | chr1_3:21234708-21234727 | Msa0109290:CDS | 30.0% | |
| ! | TTTTCCACCTATATCTCTTT+AGG | - | chr1_3:21234759-21234778 | Msa0109290:CDS | 30.0% |
| ATAAGCACTTATCACATTAG+AGG | + | chr1_3:21235025-21235044 | None:intergenic | 30.0% | |
| GAAAATAAATTGAGCGAAAG+TGG | - | chr1_3:21235097-21235116 | Msa0109290:CDS | 30.0% | |
| TAAGCAAGATCAATGCATAA+AGG | - | chr1_3:21235147-21235166 | Msa0109290:CDS | 30.0% | |
| TATGGTGCCTATAATAAATC+AGG | - | chr1_3:21235474-21235493 | Msa0109290:intron | 30.0% | |
| CATATCTATAAATACCAGCA+GGG | - | chr1_3:21235535-21235554 | Msa0109290:intron | 30.0% | |
| !!! | TAAGATTTTGGGTTGAAATG+TGG | + | chr1_3:21235795-21235814 | None:intergenic | 30.0% |
| CATTTCAACCCAAAATCTTA+AGG | - | chr1_3:21235795-21235814 | Msa0109290:intron | 30.0% | |
| AAGAAGCAATTGAGAAAGAA+AGG | - | chr1_3:21236030-21236049 | Msa0109290:intron | 30.0% | |
| AGAAGCAATTGAGAAAGAAA+GGG | - | chr1_3:21236031-21236050 | Msa0109290:intron | 30.0% | |
| AATTCTACATTTGCAAATGG+TGG | - | chr1_3:21236131-21236150 | Msa0109290:intron | 30.0% | |
| AAATGGTGGTTATGAAACAA+GGG | - | chr1_3:21236145-21236164 | Msa0109290:intron | 30.0% | |
| TGAATCAAGACAAGAAGAAT+CGG | - | chr1_3:21236265-21236284 | Msa0109290:intron | 30.0% | |
| AAGCAGTATAGGAGCAATAA+TGG | - | chr1_3:21230053-21230072 | Msa0109290:CDS | 35.0% | |
| AAAAGAGAAAACTTGGAGTG+GGG | + | chr1_3:21230104-21230123 | None:intergenic | 35.0% | |
| CAAAAGAGAAAACTTGGAGT+GGG | + | chr1_3:21230105-21230124 | None:intergenic | 35.0% | |
| ACAAAAGAGAAAACTTGGAG+TGG | + | chr1_3:21230106-21230125 | None:intergenic | 35.0% | |
| TTATGGCATGAATGATGGTT+TGG | + | chr1_3:21230149-21230168 | None:intergenic | 35.0% | |
| CTGGATACACCCTTAAATTA+TGG | + | chr1_3:21230166-21230185 | None:intergenic | 35.0% | |
| ATTGTTGAGTAGCTCATAGT+TGG | + | chr1_3:21230385-21230404 | None:intergenic | 35.0% | |
| AAATGCAGTGCTTATACCTT+TGG | + | chr1_3:21230474-21230493 | None:intergenic | 35.0% | |
| GCTTGAAAGTGAGTATTCAT+TGG | - | chr1_3:21231419-21231438 | Msa0109290:CDS | 35.0% | |
| CTTGAAAGTGATTCATTGGA+AGG | - | chr1_3:21231657-21231676 | Msa0109290:intron | 35.0% | |
| GAGAAGTCAAATGATTCCAA+CGG | - | chr1_3:21231851-21231870 | Msa0109290:intron | 35.0% | |
| TCAAATGATTCCAACGGATA+AGG | - | chr1_3:21231857-21231876 | Msa0109290:intron | 35.0% | |
| CCTTCGAATGAATCAATTTC+AGG | + | chr1_3:21231939-21231958 | None:intergenic | 35.0% | |
| ! | CCTGAAATTGATTCATTCGA+AGG | - | chr1_3:21231936-21231955 | Msa0109290:intron | 35.0% |
| AAAGGGAAAAGGTTATGATC+AGG | - | chr1_3:21232088-21232107 | Msa0109290:CDS | 35.0% | |
| AACGATGACATAGATGTTCA+AGG | - | chr1_3:21232182-21232201 | Msa0109290:CDS | 35.0% | |
| !!! | AGAAATTCTTTTGGTGGTGA+AGG | - | chr1_3:21232248-21232267 | Msa0109290:CDS | 35.0% |
| !! | TTGACATGTATGGTTCTGAA+AGG | + | chr1_3:21232289-21232308 | None:intergenic | 35.0% |
| GAGAGACTATTTGACATGTA+TGG | + | chr1_3:21232299-21232318 | None:intergenic | 35.0% | |
| CATGTTCACTAGTATCTTCT+AGG | + | chr1_3:21232557-21232576 | None:intergenic | 35.0% | |
| ATGCTTATGAGAAAGCTACA+TGG | - | chr1_3:21232685-21232704 | Msa0109290:intron | 35.0% | |
| ! | ACATCTTCCTTTTCAGCTTT+TGG | + | chr1_3:21232804-21232823 | None:intergenic | 35.0% |
| TCAAATGATTCCAACAGATG+AGG | - | chr1_3:21232926-21232945 | Msa0109290:CDS | 35.0% | |
| CAAGGTTGAAATTGATCCAT+TGG | - | chr1_3:21233001-21233020 | Msa0109290:intron | 35.0% | |
| GTTGAAATTGATCCATTGGA+AGG | - | chr1_3:21233005-21233024 | Msa0109290:intron | 35.0% | |
| TCATTAGTATCTCCTTCCAA+TGG | + | chr1_3:21233020-21233039 | None:intergenic | 35.0% | |
| GAAGGAGATACTAATGAAAG+TGG | - | chr1_3:21233023-21233042 | Msa0109290:intron | 35.0% | |
| ATGATCATGAAATAGCTGCA+GGG | - | chr1_3:21233168-21233187 | Msa0109290:intron | 35.0% | |
| TCAAGGAAAAACTACCATCT+TGG | - | chr1_3:21233280-21233299 | Msa0109290:intron | 35.0% | |
| AATGAATTTCCCTGAATCGA+TGG | + | chr1_3:21233320-21233339 | None:intergenic | 35.0% | |
| TCGATTCAGGGAAATTCATT+TGG | - | chr1_3:21233320-21233339 | Msa0109290:CDS | 35.0% | |
| ATTCAGGGAAATTCATTTGG+TGG | - | chr1_3:21233323-21233342 | Msa0109290:CDS | 35.0% | |
| CGACAAGTAAAAAGGAATGA+AGG | - | chr1_3:21233565-21233584 | Msa0109290:CDS | 35.0% | |
| GAAGTCTCTTCAATCAAACA+AGG | - | chr1_3:21233823-21233842 | Msa0109290:CDS | 35.0% | |
| CTCTTCAATCAAACAAGGTT+AGG | - | chr1_3:21233828-21233847 | Msa0109290:CDS | 35.0% | |
| TCGAATAAGTCGATCCAAAT+AGG | + | chr1_3:21233921-21233940 | None:intergenic | 35.0% | |
| ! | AAACTGTTTAGGATAGCTTG+TGG | - | chr1_3:21233968-21233987 | Msa0109290:CDS | 35.0% |
| TACATCAAATGAGTCAGAAC+AGG | - | chr1_3:21234338-21234357 | Msa0109290:intron | 35.0% | |
| ATTCATTGCCTTGAAGTGAA+TGG | + | chr1_3:21234410-21234429 | None:intergenic | 35.0% | |
| ! | TGTTGTTGTTGCCAATACTT+GGG | + | chr1_3:21234611-21234630 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGCCAATACT+TGG | + | chr1_3:21234612-21234631 | None:intergenic | 35.0% |
| !! | AGTATTGGCAACAACAACAA+TGG | - | chr1_3:21234612-21234631 | Msa0109290:CDS | 35.0% |
| CTATCCTAAAGAGATATAGG+TGG | + | chr1_3:21234766-21234785 | None:intergenic | 35.0% | |
| CGACTATCCTAAAGAGATAT+AGG | + | chr1_3:21234769-21234788 | None:intergenic | 35.0% | |
| TGATCTTGCTTAGAATCTTG+TGG | + | chr1_3:21235139-21235158 | None:intergenic | 35.0% | |
| ! | ATCATATGTATTGGCCATGT+CGG | + | chr1_3:21235191-21235210 | None:intergenic | 35.0% |
| TAATGTCCTTGATACTTCTG+TGG | - | chr1_3:21235267-21235286 | Msa0109290:CDS | 35.0% | |
| AGAGAAACTGCTTCAATTTC+AGG | + | chr1_3:21235295-21235314 | None:intergenic | 35.0% | |
| ATCATTGCATAGGAAGATTC+TGG | + | chr1_3:21235409-21235428 | None:intergenic | 35.0% | |
| TTATAGGCACCATATCAGAA+TGG | + | chr1_3:21235468-21235487 | None:intergenic | 35.0% | |
| GCATATCTATAAATACCAGC+AGG | - | chr1_3:21235534-21235553 | Msa0109290:intron | 35.0% | |
| AAGAATGAGCTAAATGATCC+AGG | - | chr1_3:21235750-21235769 | Msa0109290:intron | 35.0% | |
| ACCCAAAATCTTAAGGCTTT+CGG | - | chr1_3:21235802-21235821 | Msa0109290:intron | 35.0% | |
| ! | TCCGAAAGCCTTAAGATTTT+GGG | + | chr1_3:21235806-21235825 | None:intergenic | 35.0% |
| CAAATGGTGGTTATGAAACA+AGG | - | chr1_3:21236144-21236163 | Msa0109290:intron | 35.0% | |
| CAAGTGATGTTTGGATTATC+AGG | + | chr1_3:21236203-21236222 | None:intergenic | 35.0% | |
| CTTCTTGTCTTGATTCAGTT+CGG | + | chr1_3:21236262-21236281 | None:intergenic | 35.0% | |
| TCTGAAGACTTATCAAGCAA+TGG | + | chr1_3:21236299-21236318 | None:intergenic | 35.0% | |
| ! | AGATGATAGCTTGTCAAACA+AGG | - | chr1_3:21236316-21236335 | Msa0109290:intron | 35.0% |
| ! | ATATCTAAAGCTTCGTTCGT+TGG | - | chr1_3:21236428-21236447 | Msa0109290:intron | 35.0% |
| TTGTTCAAAGATGGAAGTGA+AGG | - | chr1_3:21236514-21236533 | Msa0109290:intron | 35.0% | |
| ! | TTGCGCTTTTCTTTTCCTTT+AGG | + | chr1_3:21236557-21236576 | None:intergenic | 35.0% |
| ! | GAAAAGAAAAGCGCAAATTG+CGG | - | chr1_3:21236561-21236580 | Msa0109290:intron | 35.0% |
| AAAGAGAAAACTTGGAGTGG+GGG | + | chr1_3:21230103-21230122 | None:intergenic | 40.0% | |
| ! | TTAGTGTGAAGTGTCAATGC+TGG | + | chr1_3:21230185-21230204 | None:intergenic | 40.0% |
| ! | CTTCACACTAAAAGTGTGTC+TGG | - | chr1_3:21230194-21230213 | Msa0109290:CDS | 40.0% |
| CAGACATATGACCCAAAATG+AGG | - | chr1_3:21230538-21230557 | Msa0109290:CDS | 40.0% | |
| AGGATTTGGAGATTTGAGCA+TGG | - | chr1_3:21230979-21230998 | Msa0109290:CDS | 40.0% | |
| GGATTTGGAGATTTGAGCAT+GGG | - | chr1_3:21230980-21230999 | Msa0109290:CDS | 40.0% | |
| TTTGAGCATGGGCAAAGAAA+TGG | - | chr1_3:21230991-21231010 | Msa0109290:CDS | 40.0% | |
| TTGAGCATGGGCAAAGAAAT+GGG | - | chr1_3:21230992-21231011 | Msa0109290:CDS | 40.0% | |
| TCATGCAAGTGGTACAGATA+TGG | - | chr1_3:21231452-21231471 | Msa0109290:CDS | 40.0% | |
| CGAGCTTGAAAGTGATTCAT+TGG | - | chr1_3:21231653-21231672 | Msa0109290:intron | 40.0% | |
| AATGCATCCAAAAGCTGAAG+TGG | - | chr1_3:21231722-21231741 | Msa0109290:intron | 40.0% | |
| ! | ACATCTTCCACTTCAGCTTT+TGG | + | chr1_3:21231732-21231751 | None:intergenic | 40.0% |
| TGAAGTGGAAGATGTTCAAG+AGG | - | chr1_3:21231737-21231756 | Msa0109290:intron | 40.0% | |
| AGCTTTCTCTTCAACGTCTT+TGG | + | chr1_3:21231883-21231902 | None:intergenic | 40.0% | |
| ACATCTTCAGCTTCATCAGT+TGG | + | chr1_3:21232005-21232024 | None:intergenic | 40.0% | |
| TGATGAAGCTGAAGATGTTG+AGG | - | chr1_3:21232007-21232026 | Msa0109290:CDS | 40.0% | |
| TCAAGGAAAAACTACGGTCT+TGG | - | chr1_3:21232199-21232218 | Msa0109290:CDS | 40.0% | |
| GCATCATTCGATTCAGCTAT+TGG | + | chr1_3:21232669-21232688 | None:intergenic | 40.0% | |
| TCATGCAAGTGACAGAAGTA+TGG | - | chr1_3:21232764-21232783 | Msa0109290:intron | 40.0% | |
| AGCTGAAAAGGAAGATGTTG+AGG | - | chr1_3:21232806-21232825 | Msa0109290:CDS | 40.0% | |
| GATGTTGAGGAGAAAGCTAA+AGG | - | chr1_3:21232819-21232838 | Msa0109290:CDS | 40.0% | |
| TGAGGAGAAAGCTAAAGGAT+TGG | - | chr1_3:21232824-21232843 | Msa0109290:CDS | 40.0% | |
| GAAGATGCAACAACTGAACT+TGG | - | chr1_3:21232852-21232871 | Msa0109290:CDS | 40.0% | |
| ACATCTTTGACCTCATCTGT+TGG | + | chr1_3:21232939-21232958 | None:intergenic | 40.0% | |
| TGATGAAGCTGAAGATGTTG+AGG | - | chr1_3:21232007-21232026 | Msa0109290:CDS | 40.0% | |
| GATGTTGAGGAGAAAGCTAT+AGG | - | chr1_3:21233089-21233108 | Msa0109290:intron | 40.0% | |
| !! | GAAAGCTATAGGACTGGTTT+CGG | - | chr1_3:21233100-21233119 | Msa0109290:intron | 40.0% |
| GATGATCATGAAATAGCTGC+AGG | - | chr1_3:21233167-21233186 | Msa0109290:intron | 40.0% | |
| TTCATCAGAAGAAGCCAAGA+TGG | + | chr1_3:21233297-21233316 | None:intergenic | 40.0% | |
| !! | TTCTGATGAACCATCGATTC+AGG | - | chr1_3:21233307-21233326 | Msa0109290:CDS | 40.0% |
| !! | TCTGATGAACCATCGATTCA+GGG | - | chr1_3:21233308-21233327 | Msa0109290:CDS | 40.0% |
| !! | GGAAATTCATTTGGTGGTGA+AGG | - | chr1_3:21233329-21233348 | Msa0109290:CDS | 40.0% |
| TTCCAGATCGGAAACCTATT+TGG | - | chr1_3:21233904-21233923 | Msa0109290:CDS | 40.0% | |
| ATCCAAATAGGTTTCCGATC+TGG | + | chr1_3:21233909-21233928 | None:intergenic | 40.0% | |
| TTATGTCCGCAAAAGTCAGA+TGG | - | chr1_3:21234525-21234544 | Msa0109290:CDS | 40.0% | |
| ! | TCTCTTCCATCTGACTTTTG+CGG | + | chr1_3:21234534-21234553 | None:intergenic | 40.0% |
| CAAAAGTCAGATGGAAGAGA+TGG | - | chr1_3:21234534-21234553 | Msa0109290:CDS | 40.0% | |
| ACATTTGATCCCCCAAGTAT+TGG | - | chr1_3:21234597-21234616 | Msa0109290:CDS | 40.0% | |
| ! | TTGTTGTTGCCAATACTTGG+GGG | + | chr1_3:21234609-21234628 | None:intergenic | 40.0% |
| ! | GTTGTTGTTGCCAATACTTG+GGG | + | chr1_3:21234610-21234629 | None:intergenic | 40.0% |
| TCTCGGATACGGTTGTAAAA+TGG | + | chr1_3:21234865-21234884 | None:intergenic | 40.0% | |
| ! | ATTTTACAACCGTATCCGAG+AGG | - | chr1_3:21234864-21234883 | Msa0109290:CDS | 40.0% |
| AGTTCAAATCCTCTCGGATA+CGG | + | chr1_3:21234876-21234895 | None:intergenic | 40.0% | |
| AGATGGAGTTCAAATCCTCT+CGG | + | chr1_3:21234882-21234901 | None:intergenic | 40.0% | |
| GATATCACAGTAGGGTCTAA+TGG | - | chr1_3:21235208-21235227 | Msa0109290:CDS | 40.0% | |
| GAAGCAGTTTCTCTTATTGC+AGG | - | chr1_3:21235301-21235320 | Msa0109290:CDS | 40.0% | |
| TCTTGATTGCACACATGACA+AGG | - | chr1_3:21235339-21235358 | Msa0109290:CDS | 40.0% | |
| CTTGATTGCACACATGACAA+GGG | - | chr1_3:21235340-21235359 | Msa0109290:CDS | 40.0% | |
| AGAGCAATGCCATTCTGATA+TGG | - | chr1_3:21235456-21235475 | Msa0109290:CDS | 40.0% | |
| AGAGCAGACCAAAAGTTTCA+TGG | - | chr1_3:21235564-21235583 | Msa0109290:intron | 40.0% | |
| ACCTGATTTAAGCATGGTTG+TGG | + | chr1_3:21235590-21235609 | None:intergenic | 40.0% | |
| CAACCATGCTTAAATCAGGT+AGG | - | chr1_3:21235590-21235609 | Msa0109290:intron | 40.0% | |
| CTTCCTACCTGATTTAAGCA+TGG | + | chr1_3:21235596-21235615 | None:intergenic | 40.0% | |
| TTACTTTGTATTTGGGTGGC+CGG | - | chr1_3:21235695-21235714 | Msa0109290:intron | 40.0% | |
| CTATGATGATTCCCTAACAC+CGG | + | chr1_3:21235717-21235736 | None:intergenic | 40.0% | |
| ! | ATTTAGCTCATTCTTGCTCC+CGG | + | chr1_3:21235745-21235764 | None:intergenic | 40.0% |
| ! | CTCCGAAAGCCTTAAGATTT+TGG | + | chr1_3:21235807-21235826 | None:intergenic | 40.0% |
| CAAAATCTTAAGGCTTTCGG+AGG | - | chr1_3:21235805-21235824 | Msa0109290:intron | 40.0% | |
| ! | AAACAAGGGAGAGTGTAACA+AGG | - | chr1_3:21236159-21236178 | Msa0109290:intron | 40.0% |
| TGCATCTGACAAGTGATGTT+TGG | + | chr1_3:21236212-21236231 | None:intergenic | 40.0% | |
| ATGAGACCATACTCATCATG+AGG | + | chr1_3:21236368-21236387 | None:intergenic | 40.0% | |
| GTGTCATCTACTTCACCTAA+AGG | - | chr1_3:21236539-21236558 | Msa0109290:intron | 40.0% | |
| GGTACGCGGTTTGATTCTAA+CGG | - | chr1_3:21231384-21231403 | Msa0109290:CDS | 45.0% | |
| GAAGAAGATGCTCATGCAAG+TGG | - | chr1_3:21231441-21231460 | Msa0109290:CDS | 45.0% | |
| AATGCATCCAACAGCTGAAG+AGG | - | chr1_3:21231482-21231501 | Msa0109290:CDS | 45.0% | |
| ACATCTTTGGCCTCATCTGT+TGG | + | chr1_3:21231591-21231610 | None:intergenic | 45.0% | |
| GTGGAAGATGTTCAAGAGGA+AGG | - | chr1_3:21231741-21231760 | Msa0109290:intron | 45.0% | |
| GATGTTCAAGAGGAAGGTTC+AGG | - | chr1_3:21231747-21231766 | Msa0109290:intron | 45.0% | |
| GCAAGAAGAAGAAAGTTGCG+AGG | - | chr1_3:21231815-21231834 | Msa0109290:intron | 45.0% | |
| GATGTTGAGGAGAAAGCTGT+AGG | - | chr1_3:21232020-21232039 | Msa0109290:CDS | 45.0% | |
| TTGAGGAGAAAGCTGTAGGA+GGG | - | chr1_3:21232024-21232043 | Msa0109290:CDS | 45.0% | |
| GCATCATGAGCATCTTCTTG+AGG | + | chr1_3:21232615-21232634 | None:intergenic | 45.0% | |
| TGAGGAGAAAGCTATAGGAC+TGG | - | chr1_3:21233094-21233113 | Msa0109290:intron | 45.0% | |
| ! | TCGGCATATGGAGACTTTTC+AGG | + | chr1_3:21233676-21233695 | None:intergenic | 45.0% |
| CTATCCAGCCATTCACTTCA+AGG | - | chr1_3:21234399-21234418 | Msa0109290:CDS | 45.0% | |
| ATTGCCTTGAAGTGAATGGC+TGG | + | chr1_3:21234406-21234425 | None:intergenic | 45.0% | |
| CAAGGTATGTAGAGCCTGTT+TGG | - | chr1_3:21234644-21234663 | Msa0109290:CDS | 45.0% | |
| ! | TCAAGAGTACAAGTCCGACA+TGG | - | chr1_3:21235174-21235193 | Msa0109290:CDS | 45.0% |
| !! | CAGGAACCACAGAAGTATCA+AGG | + | chr1_3:21235276-21235295 | None:intergenic | 45.0% |
| ! | GGTTGTGGCCATGAAACTTT+TGG | + | chr1_3:21235575-21235594 | None:intergenic | 45.0% |
| GCCACAACCATGCTTAAATC+AGG | - | chr1_3:21235586-21235605 | Msa0109290:intron | 45.0% | |
| TGTGCCACAATTGACAAGCT+TGG | - | chr1_3:21235640-21235659 | Msa0109290:intron | 45.0% | |
| ATGGCCAAGCTTGTCAATTG+TGG | + | chr1_3:21235647-21235666 | None:intergenic | 45.0% | |
| ! | CGGTGTTAGGGAATCATCAT+AGG | - | chr1_3:21235715-21235734 | Msa0109290:intron | 45.0% |
| !! | TTGGGTTGAAATGTGGTGTC+CGG | + | chr1_3:21235788-21235807 | None:intergenic | 45.0% |
| TTTCTGAACCACCGAGAGAT+CGG | + | chr1_3:21235843-21235862 | None:intergenic | 45.0% | |
| AGAAGCAGCTTCACTGATAG+TGG | - | chr1_3:21236073-21236092 | Msa0109290:intron | 45.0% | |
| CTTGTCTTGATTCAGTTCGG+AGG | + | chr1_3:21236259-21236278 | None:intergenic | 45.0% | |
| TCAGTGCCTCATGATGAGTA+TGG | - | chr1_3:21236359-21236378 | Msa0109290:intron | 45.0% | |
| AGAGGCTCATGTTCTAGTCA+TGG | - | chr1_3:21236469-21236488 | Msa0109290:intron | 45.0% | |
| AGTTTGACCCTGACACGTGT+CGG | + | chr1_3:21230223-21230242 | None:intergenic | 50.0% | |
| AGGGTCAAACTCTCACGTGT+TGG | - | chr1_3:21230232-21230251 | Msa0109290:CDS | 50.0% | |
| GCAACATCCTCTTCAGCTGT+TGG | + | chr1_3:21231492-21231511 | None:intergenic | 50.0% | |
| TCGCTGCAAGAAGAAAGCCA+CGG | - | chr1_3:21231534-21231553 | Msa0109290:intron | 50.0% | |
| ! | AGAAAGCCACGGTGATGATG+TGG | - | chr1_3:21231545-21231564 | Msa0109290:intron | 50.0% |
| TCTCTTCCACATCATCACCG+TGG | + | chr1_3:21231554-21231573 | None:intergenic | 50.0% | |
| !! | ACGTCTTTGGCCTTATCCGT+TGG | + | chr1_3:21231870-21231889 | None:intergenic | 50.0% |
| GTTGAGGAGAAAGCTGTAGG+AGG | - | chr1_3:21232023-21232042 | Msa0109290:CDS | 50.0% | |
| TGAGGAGAAAGCTGTAGGAG+GGG | - | chr1_3:21232025-21232044 | Msa0109290:CDS | 50.0% | |
| !! | CCTTCGACTGATTCGGCATA+TGG | + | chr1_3:21233688-21233707 | None:intergenic | 50.0% |
| CCATATGCCGAATCAGTCGA+AGG | - | chr1_3:21233685-21233704 | Msa0109290:CDS | 50.0% | |
| GCTCTCACCTTCGACTGATT+CGG | + | chr1_3:21233695-21233714 | None:intergenic | 50.0% | |
| GTCAGCTCAAGGCAAGAGTT+TGG | + | chr1_3:21234919-21234938 | None:intergenic | 50.0% | |
| ! | TTCCATGAGGTGTCAGCTCA+AGG | + | chr1_3:21234930-21234949 | None:intergenic | 50.0% |
| GGGTCTAATGGAGACTGCAA+TGG | - | chr1_3:21235220-21235239 | Msa0109290:CDS | 50.0% | |
| TCTGCTCTACATTTCCCTGC+TGG | + | chr1_3:21235552-21235571 | None:intergenic | 50.0% | |
| ! | TATTTGGGTGGCCGGTGTTA+GGG | - | chr1_3:21235703-21235722 | Msa0109290:intron | 50.0% |
| GGGAATCATCATAGGAGAGC+CGG | - | chr1_3:21235723-21235742 | Msa0109290:intron | 50.0% | |
| GGAATCATCATAGGAGAGCC+GGG | - | chr1_3:21235724-21235743 | Msa0109290:intron | 50.0% | |
| ATCCAGGATCACCAAGAGAC+CGG | - | chr1_3:21235766-21235785 | Msa0109290:intron | 50.0% | |
| AAATGTGGTGTCCGGTCTCT+TGG | + | chr1_3:21235780-21235799 | None:intergenic | 50.0% | |
| TAAGGCTTTCGGAGGAGACA+TGG | - | chr1_3:21235813-21235832 | Msa0109290:intron | 50.0% | |
| TTCTGAACCACCGAGAGATC+GGG | + | chr1_3:21235842-21235861 | None:intergenic | 50.0% | |
| AAATACCGTTCCAGCTGTCG+GGG | + | chr1_3:21235893-21235912 | None:intergenic | 50.0% | |
| CAAATACCGTTCCAGCTGTC+GGG | + | chr1_3:21235894-21235913 | None:intergenic | 50.0% | |
| CCAAATACCGTTCCAGCTGT+CGG | + | chr1_3:21235895-21235914 | None:intergenic | 50.0% | |
| CGGAGGTTGAGATTGAAGCT+TGG | + | chr1_3:21236242-21236261 | None:intergenic | 50.0% | |
| GAGAAAACTTGGAGTGGGGG+AGG | + | chr1_3:21230100-21230119 | None:intergenic | 55.0% | |
| ! | GCTGCAGGGTTGAGTTCTGA+TGG | - | chr1_3:21233182-21233201 | Msa0109290:intron | 55.0% |
| TGCCTTGAGCTGACACCTCA+TGG | - | chr1_3:21234925-21234944 | Msa0109290:CDS | 55.0% | |
| GTATTTGGGTGGCCGGTGTT+AGG | - | chr1_3:21235702-21235721 | Msa0109290:intron | 55.0% | |
| GACATGGTGTCCCGATCTCT+CGG | - | chr1_3:21235829-21235848 | Msa0109290:intron | 55.0% | |
| GGAGTCTCGAGAGCAACAAC+GGG | + | chr1_3:21235872-21235891 | None:intergenic | 55.0% | |
| GGGAGTCTCGAGAGCAACAA+CGG | + | chr1_3:21235873-21235892 | None:intergenic | 55.0% | |
| CCGACAGCTGGAACGGTATT+TGG | - | chr1_3:21235892-21235911 | Msa0109290:intron | 55.0% | |
| TCTGGTGTCCGACACGTGTC+AGG | - | chr1_3:21230212-21230231 | Msa0109290:CDS | 60.0% | |
| CTGGTGTCCGACACGTGTCA+GGG | - | chr1_3:21230213-21230232 | Msa0109290:CDS | 60.0% | |
| ! | GTCCGGTCTCTTGGTGATCC+TGG | + | chr1_3:21235771-21235790 | None:intergenic | 60.0% |
| ATGGTGTCCCGATCTCTCGG+TGG | - | chr1_3:21235832-21235851 | Msa0109290:intron | 60.0% | |
| AGACTCCCCGACAGCTGGAA+CGG | - | chr1_3:21235885-21235904 | Msa0109290:intron | 60.0% | |
| TCTCGAGACTCCCCGACAGC+TGG | - | chr1_3:21235880-21235899 | Msa0109290:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 21230005 | 21236631 | 21230005 | ID=Msa0109290;Name=Msa0109290 |
| chr1_3 | mRNA | 21230005 | 21236631 | 21230005 | ID=Msa0109290-mRNA-1;Parent=Msa0109290;Name=Msa0109290-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.37|0.22|0.66|1|1|9|0|1320 |
| chr1_3 | exon | 21236562 | 21236631 | 21236562 | ID=Msa0109290-mRNA-1:exon:7648;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21235596 | 21235655 | 21235596 | ID=Msa0109290-mRNA-1:exon:7647;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21234367 | 21235488 | 21234367 | ID=Msa0109290-mRNA-1:exon:7646;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21233286 | 21234119 | 21233286 | ID=Msa0109290-mRNA-1:exon:7645;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21232792 | 21232989 | 21232792 | ID=Msa0109290-mRNA-1:exon:7644;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21231989 | 21232338 | 21231989 | ID=Msa0109290-mRNA-1:exon:7643;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21230970 | 21231551 | 21230970 | ID=Msa0109290-mRNA-1:exon:7642;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21230723 | 21230864 | 21230723 | ID=Msa0109290-mRNA-1:exon:7641;Parent=Msa0109290-mRNA-1 |
| chr1_3 | exon | 21230005 | 21230609 | 21230005 | ID=Msa0109290-mRNA-1:exon:7640;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21236562 | 21236631 | 21236562 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21235596 | 21235655 | 21235596 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21234367 | 21235488 | 21234367 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21233286 | 21234119 | 21233286 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21232792 | 21232989 | 21232792 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21231989 | 21232338 | 21231989 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21230970 | 21231551 | 21230970 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21230723 | 21230864 | 21230723 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| chr1_3 | CDS | 21230005 | 21230609 | 21230005 | ID=Msa0109290-mRNA-1:cds;Parent=Msa0109290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
