AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0113740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113740 MtrunA17_Chr1g0171501 95.962 421 17 0 285 705 186 606 0.0 823
Msa0113740 MtrunA17_Chr1g0171501 91.579 190 9 3 1 187 1 186 7.51e-93 301
Msa0113740 MtrunA17_Chr7g0256181 64.608 421 149 0 285 705 203 623 0.0 587
Msa0113740 MtrunA17_Chr7g0256181 40.465 215 98 7 1 192 1 208 2.03e-24 108
Msa0113740 MtrunA17_Chr1g0211201 58.152 184 27 2 398 581 1 134 1.24e-55 186
Msa0113740 MtrunA17_Chr2g0328121 27.512 418 293 5 289 696 94 511 1.07e-46 173
Msa0113740 MtrunA17_Chr1g0211211 86.207 87 12 0 619 705 1 87 1.24e-44 154
Msa0113740 MtrunA17_Chr8g0368151 27.848 395 264 9 305 683 89 478 6.60e-35 139
Msa0113740 MtrunA17_Chr2g0282091 24.819 415 278 9 286 679 76 477 1.26e-30 126
Msa0113740 MtrunA17_Chr1g0185601 24.938 401 279 8 294 679 93 486 1.22e-26 114
Msa0113740 MtrunA17_Chr8g0359961 24.202 376 270 9 286 649 81 453 1.17e-25 111
Msa0113740 MtrunA17_Chr2g0324251 25.066 379 266 6 286 648 80 456 2.36e-22 101
Msa0113740 MtrunA17_Chr1g0155351 27.451 255 173 7 294 541 110 359 6.62e-21 95.9
Msa0113740 MtrunA17_Chr2g0303221 24.202 376 269 9 286 649 79 450 1.17e-20 95.9
Msa0113740 MtrunA17_Chr4g0021331 23.360 381 268 8 286 649 75 448 1.28e-20 95.9
Msa0113740 MtrunA17_Chr1g0194521 24.064 374 264 13 286 646 138 504 3.72e-20 94.7
Msa0113740 MtrunA17_Chr3g0132571 24.020 408 286 11 289 679 88 488 7.74e-19 90.5
Msa0113740 MtrunA17_Chr3g0089851 23.019 265 194 5 403 660 198 459 3.38e-16 82.0
Msa0113740 MtrunA17_Chr1g0210801 22.192 365 272 7 332 689 169 528 2.08e-15 79.7
Msa0113740 MtrunA17_Chr1g0210801 24.812 266 194 4 344 603 281 546 5.98e-14 75.1
Msa0113740 MtrunA17_Chr3g0099661 20.579 311 231 6 360 660 473 777 3.84e-15 79.7
Msa0113740 MtrunA17_Chr3g0099661 19.948 381 294 8 289 659 187 566 1.10e-11 68.6
Msa0113740 MtrunA17_Chr3g0099661 22.727 418 278 11 309 682 350 766 2.52e-11 67.4
Msa0113740 MtrunA17_Chr1g0196741 22.977 309 232 5 334 638 280 586 1.88e-14 77.4
Msa0113740 MtrunA17_Chr1g0166071 22.222 360 266 7 342 692 275 629 8.18e-14 75.1
Msa0113740 MtrunA17_Chr7g0256621 21.294 371 268 8 289 637 85 453 9.89e-14 74.3
Msa0113740 MtrunA17_Chr5g0417961 22.006 359 268 6 342 692 274 628 2.75e-13 73.6
Msa0113740 MtrunA17_Chr1g0147171 22.523 333 251 5 340 666 145 476 4.55e-13 72.8
Msa0113740 MtrunA17_Chr5g0419551 23.121 346 214 11 340 670 355 663 6.34e-13 72.4
Msa0113740 MtrunA17_Chr7g0265721 19.394 330 256 4 332 660 117 437 8.34e-13 72.0
Msa0113740 MtrunA17_Chr5g0434021 21.791 335 237 9 342 663 331 653 1.75e-12 71.2
Msa0113740 MtrunA17_Chr2g0290441 22.802 364 259 9 316 664 88 444 1.77e-12 70.9
Msa0113740 MtrunA17_Chr8g0390501 21.068 337 253 7 340 666 114 447 2.20e-12 70.5
Msa0113740 MtrunA17_Chr3g0143851 23.496 349 221 7 344 682 283 595 2.78e-12 70.1
Msa0113740 MtrunA17_Chr3g0143851 21.771 271 203 5 381 645 149 416 2.05e-11 67.4
Msa0113740 MtrunA17_Chr2g0297991 22.350 434 307 11 240 659 145 562 5.65e-12 69.3
Msa0113740 MtrunA17_Chr2g0297991 21.629 356 216 9 332 638 410 751 1.28e-11 68.2
Msa0113740 MtrunA17_Chr5g0396041 23.019 265 197 4 348 607 312 574 6.07e-12 69.3
Msa0113740 MtrunA17_Chr1g0168811 21.575 292 220 5 398 682 242 531 6.70e-12 68.9
Msa0113740 MtrunA17_Chr1g0168811 23.626 364 225 9 374 690 252 609 8.68e-12 68.6
Msa0113740 MtrunA17_Chr8g0390041 23.183 289 204 7 361 638 166 447 9.27e-12 68.2
Msa0113740 MtrunA17_Chr4g0059671 20.891 359 263 8 340 684 209 560 9.28e-12 68.6
Msa0113740 MtrunA17_Chr7g0236501 23.622 254 181 6 391 635 239 488 1.37e-11 67.4
Msa0113740 MtrunA17_Chr4g0076151 21.233 292 225 3 378 664 185 476 2.05e-11 67.4
Msa0113740 MtrunA17_Chr3g0125131 21.040 423 282 9 278 692 75 453 2.28e-11 66.6
Msa0113740 MtrunA17_Chr8g0359551 24.476 286 202 6 362 638 165 445 2.36e-11 67.0
Msa0113740 MtrunA17_Chr3g0136851 20.325 369 250 7 336 663 163 528 3.02e-11 67.0
Msa0113740 MtrunA17_Chr4g0033981 21.691 272 208 3 393 660 307 577 4.11e-11 66.2
Msa0113740 MtrunA17_Chr8g0382891 21.212 297 223 5 341 627 119 414 4.31e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113740 AT1G80270.1 60.291 413 163 1 294 705 184 596 0.0 543
Msa0113740 AT1G80270.1 37.324 142 70 3 61 192 48 180 1.85e-13 74.3
Msa0113740 AT1G80270.3 60.291 413 163 1 294 705 184 596 0.0 543
Msa0113740 AT1G80270.3 37.324 142 70 3 61 192 48 180 1.85e-13 74.3
Msa0113740 AT1G80270.2 60.291 413 163 1 294 705 184 596 0.0 543
Msa0113740 AT1G80270.2 37.324 142 70 3 61 192 48 180 1.85e-13 74.3
Msa0113740 AT1G80270.5 60.291 413 163 1 294 705 184 596 0.0 543
Msa0113740 AT1G80270.5 37.324 142 70 3 61 192 48 180 1.85e-13 74.3
Msa0113740 AT1G80270.4 60.291 413 163 1 294 705 184 596 0.0 543
Msa0113740 AT1G80270.4 37.324 142 70 3 61 192 48 180 1.85e-13 74.3
Msa0113740 AT1G15480.1 57.346 422 179 1 285 705 173 594 1.14e-173 509
Msa0113740 AT1G15480.1 38.037 163 78 5 41 192 28 178 1.15e-15 81.3
Msa0113740 AT3G15590.1 54.722 413 186 1 294 705 197 609 9.00e-156 464
Msa0113740 AT3G15590.2 54.722 413 186 1 294 705 197 609 9.00e-156 464
Msa0113740 AT1G07590.1 27.750 400 279 4 293 682 120 519 6.88e-38 149
Msa0113740 AT1G60770.1 27.778 396 265 9 305 684 89 479 1.39e-36 144
Msa0113740 AT2G20710.1 29.365 378 247 9 287 648 83 456 8.65e-34 136
Msa0113740 AT4G21705.1 24.936 389 271 8 286 659 73 455 7.29e-32 130
Msa0113740 AT2G20710.2 29.050 358 238 7 303 648 8 361 3.42e-31 126
Msa0113740 AT4G02820.1 27.387 398 269 8 294 679 117 506 3.02e-28 120
Msa0113740 AT5G27460.1 25.980 408 280 9 289 679 89 491 3.71e-27 116
Msa0113740 AT1G02150.1 24.119 369 256 10 294 645 123 484 4.22e-25 110
Msa0113740 AT1G02370.1 27.019 322 224 9 289 603 122 439 4.55e-23 104
Msa0113740 AT4G01990.1 29.455 275 183 10 293 559 95 366 5.56e-23 103
Msa0113740 AT3G23020.1 22.695 423 296 9 292 692 241 654 4.59e-18 89.4
Msa0113740 AT4G39620.2 24.650 357 238 10 340 682 69 408 5.16e-17 85.1
Msa0113740 AT1G28020.1 27.602 221 150 5 294 507 92 309 8.20e-17 84.3
Msa0113740 AT4G39620.1 24.650 357 238 10 340 682 69 408 9.37e-17 84.7
Msa0113740 AT5G02860.1 22.824 425 268 9 292 664 157 573 1.13e-16 84.7
Msa0113740 AT5G02860.1 22.152 316 236 5 342 652 282 592 2.28e-15 80.9
Msa0113740 AT5G02860.1 19.578 332 253 6 362 683 442 769 4.26e-11 67.0
Msa0113740 AT5G02860.4 22.824 425 268 9 292 664 157 573 1.13e-16 84.7
Msa0113740 AT5G02860.4 22.152 316 236 5 342 652 282 592 2.28e-15 80.9
Msa0113740 AT5G02860.4 19.578 332 253 6 362 683 442 769 4.26e-11 67.0
Msa0113740 AT5G02860.2 22.824 425 268 9 292 664 157 573 1.13e-16 84.7
Msa0113740 AT5G02860.2 22.152 316 236 5 342 652 282 592 2.28e-15 80.9
Msa0113740 AT5G02860.2 19.578 332 253 6 362 683 442 769 4.26e-11 67.0
Msa0113740 AT5G02860.5 22.824 425 268 9 292 664 157 573 1.13e-16 84.7
Msa0113740 AT5G02860.5 22.152 316 236 5 342 652 282 592 2.28e-15 80.9
Msa0113740 AT5G02860.5 19.578 332 253 6 362 683 442 769 4.26e-11 67.0
Msa0113740 AT5G02860.3 22.824 425 268 9 292 664 157 573 1.13e-16 84.7
Msa0113740 AT5G02860.3 22.152 316 236 5 342 652 282 592 2.28e-15 80.9
Msa0113740 AT5G02860.3 19.578 332 253 6 362 683 442 769 4.26e-11 67.0
Msa0113740 AT2G35130.3 22.222 288 219 3 382 665 235 521 1.15e-16 84.3
Msa0113740 AT2G35130.3 23.759 282 209 4 328 603 284 565 7.58e-13 72.4
Msa0113740 AT2G35130.1 22.222 288 219 3 382 665 238 524 1.22e-16 84.3
Msa0113740 AT2G35130.1 23.759 282 209 4 328 603 287 568 8.31e-13 72.0
Msa0113740 AT2G35130.2 22.222 288 219 3 382 665 260 546 1.36e-16 84.3
Msa0113740 AT2G35130.2 23.759 282 209 4 328 603 309 590 1.15e-12 71.6
Msa0113740 AT3G59040.1 22.186 311 232 6 339 642 139 446 2.84e-14 76.6
Msa0113740 AT4G16390.1 20.548 365 284 4 306 664 106 470 3.76e-14 76.6
Msa0113740 AT3G59040.2 22.186 311 232 6 339 642 146 453 5.12e-14 75.9
Msa0113740 AT2G31400.2 21.637 342 257 7 369 702 263 601 3.80e-13 73.6
Msa0113740 AT2G31400.1 21.637 342 257 7 369 702 263 601 4.41e-13 73.6
Msa0113740 AT1G02060.1 21.958 378 253 8 293 660 88 433 9.64e-13 72.0
Msa0113740 AT5G09450.1 20.784 255 191 6 294 541 111 361 1.36e-12 70.9
Msa0113740 AT3G22470.1 20.073 274 214 3 394 663 231 503 1.87e-12 70.9
Msa0113740 AT1G74850.1 21.405 299 227 5 391 682 159 456 2.17e-12 71.2
Msa0113740 AT2G17140.1 21.724 290 216 4 403 682 142 430 2.78e-12 70.9
Msa0113740 AT2G17140.2 21.724 290 216 4 403 682 142 430 2.78e-12 70.9
Msa0113740 AT5G16640.1 23.810 336 236 9 362 684 174 502 4.23e-12 69.7
Msa0113740 AT3G06920.2 22.846 267 191 8 406 663 564 824 4.92e-12 70.1
Msa0113740 AT3G06920.2 20.319 502 332 11 242 682 211 705 3.33e-11 67.4
Msa0113740 AT3G06920.3 22.846 267 191 8 406 663 564 824 4.92e-12 70.1
Msa0113740 AT3G06920.3 20.319 502 332 11 242 682 211 705 3.33e-11 67.4
Msa0113740 AT3G06920.1 22.846 267 191 8 406 663 550 810 5.23e-12 70.1
Msa0113740 AT3G06920.1 20.319 502 332 11 242 682 197 691 4.27e-11 67.0
Msa0113740 AT2G18940.1 20.896 402 307 7 290 682 266 665 5.68e-12 69.7
Msa0113740 AT2G18940.1 20.679 324 250 4 342 659 213 535 8.80e-12 69.3
Msa0113740 AT1G43010.1 26.966 178 122 4 286 461 84 255 5.75e-12 67.0
Msa0113740 AT5G21222.1 21.192 302 223 6 399 689 380 677 5.86e-12 69.7
Msa0113740 AT5G21222.2 21.192 302 223 6 399 689 380 677 5.86e-12 69.7
Msa0113740 AT5G21222.4 21.192 302 223 6 399 689 380 677 5.86e-12 69.7
Msa0113740 AT5G21222.3 21.192 302 223 6 399 689 380 677 5.86e-12 69.7
Msa0113740 AT1G09820.1 21.519 316 224 10 360 660 174 480 1.42e-11 68.2
Msa0113740 AT1G12700.3 21.569 255 195 3 394 644 230 483 1.57e-11 68.2
Msa0113740 AT1G12700.2 21.569 255 195 3 394 644 230 483 1.57e-11 68.2
Msa0113740 AT1G12700.1 21.569 255 195 3 394 644 214 467 1.60e-11 68.2
Msa0113740 AT1G12775.1 18.873 355 266 6 362 700 216 564 2.10e-11 67.8
Msa0113740 AT1G20300.1 24.473 237 171 4 407 638 150 383 4.17e-11 66.6
Msa0113740 AT3G04760.1 21.607 361 266 8 285 630 95 453 4.73e-11 66.6
Msa0113740 AT5G25630.1 24.302 358 222 8 354 665 130 484 4.75e-11 66.6
Msa0113740 AT2G15630.1 20.521 307 241 3 337 641 153 458 5.79e-11 66.2
Msa0113740 AT1G06710.7 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.1 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.9 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.4 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.13 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.3 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.8 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.2 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.19 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.5 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.6 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.12 24.233 326 215 8 342 638 340 662 5.83e-11 66.6
Msa0113740 AT1G06710.15 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.18 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.17 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.14 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.16 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.10 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT1G06710.11 24.233 326 215 8 342 638 340 662 6.07e-11 66.6
Msa0113740 AT5G25630.3 24.302 358 222 8 354 665 79 433 6.96e-11 65.9

Find 180 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCGCCTTTATGCAATTC+TGG 0.131994 1_3:-29762175 Msa0113740:CDS
AATTCTCCTCTGAAAGAATT+TGG 0.158452 1_3:+29762630 None:intergenic
CTTTGGTAGGCCACGCAATT+TGG 0.211951 1_3:+29762677 None:intergenic
TTGAGATGATGTCAAATAAA+TGG 0.223409 1_3:-29762029 Msa0113740:CDS
AGAAGAGGCAATAAATAAAT+AGG 0.231562 1_3:-29767137 None:intergenic
TCATCATCCCACTTGTTTAC+TGG 0.244968 1_3:-29763581 Msa0113740:CDS
TACTACTTATATGACTATTA+TGG 0.245430 1_3:-29761782 Msa0113740:CDS
GTACTGATTAATGCATTAAT+AGG 0.246031 1_3:-29761405 Msa0113740:three_prime_UTR
AAGGCGATTGTAAGTGTTTC+AGG 0.253571 1_3:-29766429 Msa0113740:CDS
CTGATGAAGTGGAGAGAATT+TGG 0.254386 1_3:-29762146 Msa0113740:CDS
CAGGAGTGCTTCGTAATTCC+TGG 0.269398 1_3:+29761996 None:intergenic
CCAAAGCTTTGTTGGGGAAT+AGG 0.275744 1_3:+29761593 None:intergenic
GCCAGGCATTATGCCACAGC+TGG 0.290386 1_3:-29762279 Msa0113740:CDS
CCATCTAACACGGGCATCTT+TGG 0.291007 1_3:-29762301 Msa0113740:CDS
TTGGTTGCCAAACCCTAATA+TGG 0.319838 1_3:-29763709 Msa0113740:CDS
ACGGATCAAGTTGCGCCAAC+TGG 0.333303 1_3:+29761566 None:intergenic
CTCGACAAGTGGGTTGAAAA+AGG 0.339148 1_3:-29766387 Msa0113740:CDS
ACTATTATTAGTTAGTTTGA+TGG 0.339773 1_3:-29761464 Msa0113740:three_prime_UTR
CAAGACAAAATATTCAAATT+CGG 0.341894 1_3:+29761427 None:intergenic
TTCAACAAAATGAGGGAGTT+AGG 0.346945 1_3:-29762543 Msa0113740:CDS
GAAGAGGCAATAAATAAATA+GGG 0.347021 1_3:-29767136 None:intergenic
CAAGGGCTTAATAACAATTC+AGG 0.347172 1_3:-29766819 Msa0113740:CDS
CCTTGCTGCAATTGAAGCTT+GGG 0.357826 1_3:-29762088 Msa0113740:CDS
CACTCCTGAAAATTTATATA+AGG 0.364562 1_3:-29761981 Msa0113740:CDS
GCCTTGCTGCAATTGAAGCT+TGG 0.373021 1_3:-29762089 Msa0113740:CDS
CTGGGCAGCCAAAGCTTTGT+TGG 0.373233 1_3:+29761585 None:intergenic
CGGCTATCTCCGTCTGCATC+TGG 0.376773 1_3:+29766555 None:intergenic
CTTCGCCTTTATGCAATTCT+GGG 0.384775 1_3:-29762174 Msa0113740:CDS
TGGCGCAACTTGATCCGTTT+AGG 0.388967 1_3:-29761561 Msa0113740:CDS
TTGTTCCCCATATTAGGGTT+TGG 0.390444 1_3:+29763702 None:intergenic
ACTAGCTAACTGTGCTAGTC+TGG 0.392913 1_3:-29762592 Msa0113740:CDS
AGAAAATCTTCTCTGCGTTA+TGG 0.396626 1_3:+29761734 None:intergenic
TTGCAAGCAAATGCTGTAAC+AGG 0.398542 1_3:+29762516 None:intergenic
TGGGCAGCCAAAGCTTTGTT+GGG 0.398974 1_3:+29761586 None:intergenic
CTGAATTGTTATTAAGCCCT+TGG 0.401030 1_3:+29766820 None:intergenic
AACTACCAGCATATGGGATC+AGG 0.402981 1_3:-29761636 Msa0113740:CDS
ACAGCCTCCTCTGAAGTGTT+TGG 0.409253 1_3:+29766765 None:intergenic
GATCCCATATGCTGGTAGTT+TGG 0.409900 1_3:+29761639 None:intergenic
TGTATGATTTGATGAGAATC+AGG 0.410014 1_3:+29766735 None:intergenic
CAATCAAGCAAATCAGAAAC+TGG 0.410076 1_3:+29761532 None:intergenic
AGCTGACGTGTTACTTATGA+TGG 0.410774 1_3:-29762451 Msa0113740:CDS
CCAGTGGGCAATGGCACAAT+AGG 0.411936 1_3:+29763655 None:intergenic
GCATAAAGGCGAAGCAAAGT+TGG 0.422948 1_3:+29762183 None:intergenic
CAAAGCTTTGGCTGCCCAGT+TGG 0.424772 1_3:-29761581 Msa0113740:CDS
CGAAGAGCCCACATACTTGT+TGG 0.429511 1_3:+29767021 None:intergenic
AACGCCAAACTACCAGCATA+TGG 0.429917 1_3:-29761643 Msa0113740:CDS
GGAGATAGTAGATGCACAAT+AGG 0.432935 1_3:-29761916 Msa0113740:CDS
CAGCACAGAGGTGGGGCAGT+AGG 0.433852 1_3:+29763625 None:intergenic
GAATTAAGCAGGCAAGAGAT+TGG 0.439041 1_3:-29766360 Msa0113740:CDS
ATGGGGTTCATTTGTTGAGT+AGG 0.439831 1_3:-29761370 Msa0113740:three_prime_UTR
CCTATTCCCCAACAAAGCTT+TGG 0.442635 1_3:-29761593 Msa0113740:CDS
GTTTCTGATTTGCTTGATTG+AGG 0.445276 1_3:-29761529 Msa0113740:exon
GTGTCTCTTTATGTTCAAGC+AGG 0.447381 1_3:-29761871 Msa0113740:CDS
AATTAAGCAGGCAAGAGATT+GGG 0.449212 1_3:-29766359 Msa0113740:CDS
CCTTTATGCAATTCTGGGTA+GGG 0.456352 1_3:-29762169 Msa0113740:CDS
CCAGGCATTATGCCACAGCT+GGG 0.457618 1_3:-29762278 Msa0113740:CDS
ATTGAGTGGTCATTGGAGGT+TGG 0.458920 1_3:-29763728 Msa0113740:CDS
AAAACTTGAAAGAGAATATG+TGG 0.460609 1_3:-29762212 Msa0113740:CDS
TCTGGAAAATTTGAGGAAAA+CGG 0.461036 1_3:-29762574 Msa0113740:CDS
CCCTACCCAGAATTGCATAA+AGG 0.464815 1_3:+29762169 None:intergenic
CGTGTTACTTATGATGGAAA+AGG 0.465313 1_3:-29762445 Msa0113740:CDS
AAGACAAAATATTCAAATTC+GGG 0.468706 1_3:+29761428 None:intergenic
CCAAAGATGCCCGTGTTAGA+TGG 0.473622 1_3:+29762301 None:intergenic
GTGCTAGTCTGGAAAATTTG+AGG 0.473927 1_3:-29762581 Msa0113740:CDS
GCACAATAGGTCCAACAACC+TGG 0.473985 1_3:-29761903 Msa0113740:CDS
CATCAATGAGCTGGAGTTGT+CGG 0.474367 1_3:-29766514 Msa0113740:CDS
CTCTGTGACCAACAAGTATG+TGG 0.476432 1_3:-29767029 Msa0113740:exon
TGAGTCAAAGCCACGGGTTG+AGG 0.476716 1_3:-29762115 Msa0113740:CDS
CATGATGCTTTGTATAATGC+AGG 0.476997 1_3:+29763761 None:intergenic
GGCAGTAGGGTTTCGTCCAG+TGG 0.477242 1_3:+29763639 None:intergenic
TGGTTGCCAAACCCTAATAT+GGG 0.479849 1_3:-29763708 Msa0113740:CDS
AAGGATCTTATTAAGACAAT+GGG 0.483656 1_3:-29761937 Msa0113740:CDS
GTCAAATAAATGGAAACTTA+CGG 0.484212 1_3:-29762019 Msa0113740:CDS
ATTTGATGAGAATCAGGAAC+AGG 0.485096 1_3:+29766741 None:intergenic
GAAGGCAGAAGGTTGTGAAC+TGG 0.485896 1_3:-29762325 Msa0113740:CDS
GCCTTTATGCAATTCTGGGT+AGG 0.486972 1_3:-29762170 Msa0113740:CDS
CATAAAGGCGAAGCAAAGTT+GGG 0.488820 1_3:+29762184 None:intergenic
GAAAATCACCAGTAAACAAG+TGG 0.489342 1_3:+29763573 None:intergenic
TGGGATGATGAAAAGAAGTT+TGG 0.489738 1_3:+29763593 None:intergenic
TTTGATTGAGTGGTCATTGG+AGG 0.498683 1_3:-29763732 Msa0113740:CDS
CCTATTGTGCCATTGCCCAC+TGG 0.500481 1_3:-29763655 Msa0113740:CDS
CATGTTCCAAATTCTTTCAG+AGG 0.502733 1_3:-29762636 Msa0113740:CDS
CATAAGCCTGTGCTAGAGCA+TGG 0.503113 1_3:+29761668 None:intergenic
CCCAGCTGTGGCATAATGCC+TGG 0.503958 1_3:+29762278 None:intergenic
GGAATGTCTAATGATATTGA+TGG 0.505590 1_3:-29762372 Msa0113740:CDS
CTTCGGTTCGCCTCACCCTA+AGG 0.511576 1_3:-29766993 Msa0113740:intron
AGGAAACATTCAACAAAATG+AGG 0.512047 1_3:-29762551 Msa0113740:CDS
CGGATCAAGTTGCGCCAACT+GGG 0.512477 1_3:+29761567 None:intergenic
CTCTCCCTGATCCCATATGC+TGG 0.513228 1_3:+29761631 None:intergenic
GCAGTAGGGTTTCGTCCAGT+GGG 0.518728 1_3:+29763640 None:intergenic
AAGAGACACAAGTGCATCCC+AGG 0.520884 1_3:+29761885 None:intergenic
TGGAACTGTAGGCCTTGGAT+TGG 0.526771 1_3:-29762764 Msa0113740:intron
TAAGATGCTAAACAAGGGTA+AGG 0.531142 1_3:-29761956 Msa0113740:CDS
AGCACAGAGGTGGGGCAGTA+GGG 0.531857 1_3:+29763626 None:intergenic
GAGACGTTCAGAACTATTCA+AGG 0.532469 1_3:-29766448 Msa0113740:CDS
AAGTTAGACGAGAGAGAGAG+TGG 0.537011 1_3:+29763418 None:intergenic
CAGCATATGGGATCAGGGAG+AGG 0.538835 1_3:-29761630 Msa0113740:CDS
GTGGGCTCTTCGCAGAACTT+CGG 0.539150 1_3:-29767010 Msa0113740:CDS
TCCGTTCCATGCTCTAGCAC+AGG 0.542493 1_3:-29761674 Msa0113740:CDS
TGAAAGTTCAGCACAGAGGT+GGG 0.544872 1_3:+29763617 None:intergenic
AAGAGGCAATAAATAAATAG+GGG 0.547652 1_3:-29767135 None:intergenic
TGGAATTAATTTGACAGAAG+CGG 0.547793 1_3:+29766785 None:intergenic
ACGCCAAACTACCAGCATAT+GGG 0.548128 1_3:-29761642 Msa0113740:CDS
TAAGGATCTTATTAAGACAA+TGG 0.550207 1_3:-29761938 Msa0113740:CDS
TAACACGGGCATCTTTGGCC+AGG 0.550612 1_3:-29762296 Msa0113740:CDS
TCTGGGTAGGGCTGATGAAG+TGG 0.551487 1_3:-29762157 Msa0113740:CDS
ATAAATGGAAACTTACGGCC+AGG 0.554195 1_3:-29762014 Msa0113740:CDS
TATGAATTTGTAGAAACCAA+GGG 0.554373 1_3:-29766836 Msa0113740:intron
CACCCGTGAACTTTCCTCAC+AGG 0.554630 1_3:-29766652 Msa0113740:CDS
GTTTGACTCTAGCCAATCCA+AGG 0.556722 1_3:+29762752 None:intergenic
GGCAATGGCACAATAGGAAG+AGG 0.558271 1_3:+29763661 None:intergenic
TGAAGTGGAGAGAATTTGGA+AGG 0.561253 1_3:-29762142 Msa0113740:CDS
GCATTTGAAAAGTTAAAGCA+CGG 0.562982 1_3:+29761488 None:intergenic
TCAAGCAGGGGAAGTCGAAA+AGG 0.563985 1_3:-29761857 Msa0113740:CDS
TATGGAGCAGTATGCAAAGA+GGG 0.564766 1_3:-29761764 Msa0113740:CDS
CTGAAAGTTCAGCACAGAGG+TGG 0.564798 1_3:+29763616 None:intergenic
GAAGAAAATTGAAGAAGCAG+AGG 0.567623 1_3:-29762058 Msa0113740:CDS
GTTGAGACAATGAAGGCAGA+AGG 0.568075 1_3:-29762336 Msa0113740:CDS
CAGCCTGTGAGGAAAGTTCA+CGG 0.570106 1_3:+29766649 None:intergenic
ACAAGTGCATCCCAGGTTGT+TGG 0.573061 1_3:+29761892 None:intergenic
TGTCTCTTTATGTTCAAGCA+GGG 0.574299 1_3:-29761870 Msa0113740:CDS
TTATGAATTTGTAGAAACCA+AGG 0.576721 1_3:-29766837 Msa0113740:intron
TCAAATTGTTGAGACAATGA+AGG 0.580306 1_3:-29762343 Msa0113740:CDS
GTCATATAAGTAGTAAACAT+TGG 0.580593 1_3:+29761790 None:intergenic
TAGGAAGAGGAAGAGTAAAG+TGG 0.581921 1_3:+29763674 None:intergenic
GGGTTTCGTCCAGTGGGCAA+TGG 0.584432 1_3:+29763646 None:intergenic
ATTAATTCCAAACACTTCAG+AGG 0.585281 1_3:-29766772 Msa0113740:CDS
TTGATACTGCTCTCGACAAG+TGG 0.586005 1_3:-29766398 Msa0113740:CDS
TGAAATAGACATCAATGAGC+TGG 0.586036 1_3:-29766523 Msa0113740:CDS
TGGCATTGAATAGTCTTCGA+AGG 0.593800 1_3:-29766335 Msa0113740:CDS
GGTTTGTGAGTCAAAGCCAC+GGG 0.594479 1_3:-29762121 Msa0113740:CDS
AGCCTGTGAGGAAAGTTCAC+GGG 0.596801 1_3:+29766650 None:intergenic
TGTCTATTTCAGCAGTGTCA+CGG 0.599022 1_3:+29766535 None:intergenic
AGCATGAGGTATGTGGCGGT+CGG 0.601401 1_3:+29766695 None:intergenic
ACTACCAGCATATGGGATCA+GGG 0.601831 1_3:-29761635 Msa0113740:CDS
CAAATTGCGTGGCCTACCAA+AGG 0.601950 1_3:-29762676 Msa0113740:CDS
AAGGCATAAGATGCTAAACA+AGG 0.601987 1_3:-29761962 Msa0113740:CDS
CACAATAGGTCCAACAACCT+GGG 0.602444 1_3:-29761902 Msa0113740:CDS
CATTTGAAAAGTTAAAGCAC+GGG 0.606997 1_3:+29761489 None:intergenic
GGAAACATTCAACAAAATGA+GGG 0.611621 1_3:-29762550 Msa0113740:CDS
CCCAAGCTTCAATTGCAGCA+AGG 0.612921 1_3:+29762088 None:intergenic
AAGCAGGCAAGAGATTGGGT+TGG 0.616311 1_3:-29766355 Msa0113740:CDS
GTGAACTGGACCATCTAACA+CGG 0.617105 1_3:-29762311 Msa0113740:CDS
AATTCCAAACACTTCAGAGG+AGG 0.617941 1_3:-29766769 Msa0113740:CDS
CTTGCTGCAATTGAAGCTTG+GGG 0.618565 1_3:-29762087 Msa0113740:CDS
GAAAGTTCAGCACAGAGGTG+GGG 0.620144 1_3:+29763618 None:intergenic
AAACTTGAAAGAGAATATGT+GGG 0.621557 1_3:-29762211 Msa0113740:CDS
TGCGGATGATCGTGATGACA+TGG 0.623435 1_3:-29766601 Msa0113740:CDS
GCCTGTGCTAGAGCATGGAA+CGG 0.627437 1_3:+29761673 None:intergenic
TTGACTGAGCCAGATGCAGA+CGG 0.627744 1_3:-29766564 Msa0113740:CDS
AGGTTTGTGAGTCAAAGCCA+CGG 0.627828 1_3:-29762122 Msa0113740:CDS
GGGTGGTGAGAGTAAATCTG+TGG 0.628134 1_3:+29766670 None:intergenic
AGATTGATAACCTTAGGGTG+AGG 0.631430 1_3:+29766983 None:intergenic
GCAAGGCAGTCCTCAACCCG+TGG 0.631837 1_3:+29762105 None:intergenic
GAATGTCTAATGATATTGAT+GGG 0.632015 1_3:-29762371 Msa0113740:CDS
ATGATGCTTTGTATAATGCA+GGG 0.632218 1_3:+29763762 None:intergenic
GCTGTATTGAAGGAGATTGA+AGG 0.637752 1_3:-29762237 Msa0113740:CDS
GATTTGATTGCCAAATTGCG+TGG 0.637784 1_3:-29762687 Msa0113740:CDS
GTCTCTTTATGTTCAAGCAG+GGG 0.638136 1_3:-29761869 Msa0113740:CDS
TCTGTGACCAACAAGTATGT+GGG 0.644471 1_3:-29767028 Msa0113740:exon
GGGCAGCCAAAGCTTTGTTG+GGG 0.644851 1_3:+29761587 None:intergenic
TGTGGGAAGCATGAGGTATG+TGG 0.646414 1_3:+29766688 None:intergenic
AGTTAGACGAGAGAGAGAGT+GGG 0.648262 1_3:+29763419 None:intergenic
TGATACTGCTCTCGACAAGT+GGG 0.651981 1_3:-29766397 Msa0113740:CDS
AGGCATAAGATGCTAAACAA+GGG 0.655332 1_3:-29761961 Msa0113740:CDS
AGAGGCAATAAATAAATAGG+GGG 0.657136 1_3:-29767134 Msa0113740:five_prime_UTR
GCTGCTAGCATCAGCCTGTG+AGG 0.664179 1_3:+29766638 None:intergenic
CTGTGAGGAAAGTTCACGGG+TGG 0.665610 1_3:+29766653 None:intergenic
GGTGGTGAGAGTAAATCTGT+GGG 0.666364 1_3:+29766671 None:intergenic
GTAAATCTGTGGGAAGCATG+AGG 0.666890 1_3:+29766681 None:intergenic
GGAAAATTTGAGGAAAACGG+AGG 0.667007 1_3:-29762571 Msa0113740:CDS
GGTTGCCAAACCCTAATATG+GGG 0.671697 1_3:-29763707 Msa0113740:CDS
AAGAATTTGGAACATGCTCG+AGG 0.672014 1_3:+29762643 None:intergenic
AAAATCACCAGTAAACAAGT+GGG 0.673820 1_3:+29763574 None:intergenic
TGAACTGGACCATCTAACAC+GGG 0.674176 1_3:-29762310 Msa0113740:CDS
TTATGGAGCAGTATGCAAAG+AGG 0.687746 1_3:-29761765 Msa0113740:CDS
ATGGAGCAGTATGCAAAGAG+GGG 0.696039 1_3:-29761763 Msa0113740:CDS
TGGCTGAAAGTTCAGCACAG+AGG 0.724982 1_3:+29763613 None:intergenic
GGGAAGCATGAGGTATGTGG+CGG 0.750944 1_3:+29766691 None:intergenic
ATGCTTTGTATAATGCAGGG+AGG 0.760864 1_3:+29763765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAATTTTAGACTTAATA+TGG - chr1_3:29763343-29763362 Msa0113740:intron 10.0%
!!! TATAATTTTAGACTTAATAT+GGG - chr1_3:29763344-29763363 Msa0113740:intron 10.0%
!! TAAAAAATAAATATTGTTGA+TGG + chr1_3:29763793-29763812 None:intergenic 10.0%
!! AAAATTAAAACATCATATTA+TGG + chr1_3:29765651-29765670 None:intergenic 10.0%
!! ATGAAATAATAAATGAGTAA+GGG + chr1_3:29762343-29762362 None:intergenic 15.0%
!! AATGAAATAATAAATGAGTA+AGG + chr1_3:29762344-29762363 None:intergenic 15.0%
!!! ATTTTTCATTGTATTATTGT+TGG - chr1_3:29764588-29764607 Msa0113740:intron 15.0%
!!! TTTTATCTTTTTTCTTTCTT+TGG - chr1_3:29765681-29765700 Msa0113740:intron 15.0%
!!! TTGATTTTATTATTTGATCC+CGG - chr1_3:29761556-29761575 Msa0113740:CDS 20.0%
!! AATAGTGAAAATGATTAAAC+CGG + chr1_3:29761578-29761597 None:intergenic 20.0%
!! TATGTGTAATTTCTTCAAAA+TGG + chr1_3:29762262-29762281 None:intergenic 20.0%
!! ACAACATTTATTTGATTCTT+TGG + chr1_3:29762285-29762304 None:intergenic 20.0%
!! TTCAATGCAACATTAATTAT+TGG + chr1_3:29762448-29762467 None:intergenic 20.0%
!! AACAAAATAATTCTCCAAAA+TGG - chr1_3:29762486-29762505 Msa0113740:CDS 20.0%
!! ATGTTACAATATAGAAAAGA+TGG - chr1_3:29762548-29762567 Msa0113740:CDS 20.0%
!! ATATCCAAACAATATAAGAT+GGG + chr1_3:29762580-29762599 None:intergenic 20.0%
!!! AATGATAGTTCAACTTTTAT+AGG - chr1_3:29762656-29762675 Msa0113740:CDS 20.0%
!!! AATATAATTTGTCTATTTGC+TGG - chr1_3:29763191-29763210 Msa0113740:intron 20.0%
!!! ATATAATTTGTCTATTTGCT+GGG - chr1_3:29763192-29763211 Msa0113740:intron 20.0%
!! AAAAATCGTAAATCATGAAT+CGG + chr1_3:29763235-29763254 None:intergenic 20.0%
!! AAATATCTCCTAAATTATGA+TGG + chr1_3:29763310-29763329 None:intergenic 20.0%
!! TTTATCAAATGACTTCATAA+TGG + chr1_3:29763375-29763394 None:intergenic 20.0%
!! TGTTATTGTATTTATGATGA+TGG - chr1_3:29763429-29763448 Msa0113740:CDS 20.0%
!! TATATAAACACTAAACCATT+AGG + chr1_3:29763468-29763487 None:intergenic 20.0%
!!! TATTTTGTTTGTTTCTAAGT+AGG + chr1_3:29763699-29763718 None:intergenic 20.0%
!!! TACAGTTTTTTTAAATACGT+GGG + chr1_3:29763916-29763935 None:intergenic 20.0%
!!! TTACAGTTTTTTTAAATACG+TGG + chr1_3:29763917-29763936 None:intergenic 20.0%
!!! TTTGTTTTTTGTTTGTTTGA+TGG - chr1_3:29763964-29763983 Msa0113740:intron 20.0%
!!! TTGTTTTTTGTTTGTTTGAT+GGG - chr1_3:29763965-29763984 Msa0113740:intron 20.0%
!! CATAACATTCTTTCAAAATA+TGG - chr1_3:29764255-29764274 Msa0113740:intron 20.0%
!!! AAACTTTGATAATGGAAAAA+TGG + chr1_3:29765371-29765390 None:intergenic 20.0%
!!! TTTTTCCATTATCAAAGTTT+TGG - chr1_3:29765371-29765390 Msa0113740:intron 20.0%
!!! TTTTCCATTATCAAAGTTTT+GGG - chr1_3:29765372-29765391 Msa0113740:intron 20.0%
!!! TGAAGTGTCAATAAAATAAT+TGG + chr1_3:29765431-29765450 None:intergenic 20.0%
!!! ATTTTGTAAGTATAAGAAGA+AGG + chr1_3:29766061-29766080 None:intergenic 20.0%
!!! AAAATTTTAATAGACGTGAA+GGG - chr1_3:29766076-29766095 Msa0113740:intron 20.0%
!!! TATGCCTTATATAAATTTTC+AGG + chr1_3:29766495-29766514 None:intergenic 20.0%
!! TACTACTTATATGACTATTA+TGG - chr1_3:29766687-29766706 Msa0113740:CDS 20.0%
!!! ACTATTATTAGTTAGTTTGA+TGG - chr1_3:29767005-29767024 Msa0113740:CDS 20.0%
!! AAGACAAAATATTCAAATTC+GGG + chr1_3:29767044-29767063 None:intergenic 20.0%
!! CAAGACAAAATATTCAAATT+CGG + chr1_3:29767045-29767064 None:intergenic 20.0%
!!! TAATAGGTTTTATGATTTCA+TGG - chr1_3:29767080-29767099 Msa0113740:five_prime_UTR 20.0%
!!! AATAGGTTTTATGATTTCAT+GGG - chr1_3:29767081-29767100 Msa0113740:five_prime_UTR 20.0%
!!! TCCATTTCTAAAAAAAAAAG+TGG - chr1_3:29767129-29767148 Msa0113740:five_prime_UTR 20.0%
!!! ACCACTTTTTTTTTTAGAAA+TGG + chr1_3:29767133-29767152 None:intergenic 20.0%
! ATAGTGAAAATGATTAAACC+GGG + chr1_3:29761577-29761596 None:intergenic 25.0%
! TTATGAATTTGTAGAAACCA+AGG - chr1_3:29761632-29761651 Msa0113740:CDS 25.0%
! TATGAATTTGTAGAAACCAA+GGG - chr1_3:29761633-29761652 Msa0113740:CDS 25.0%
! ACAAAAAATCACTTTCTACA+AGG - chr1_3:29761999-29762018 Msa0113740:CDS 25.0%
! AAAAAGGTAAAGAATTAAGC+AGG - chr1_3:29762098-29762117 Msa0113740:CDS 25.0%
!! AATGGATAAGTATTGTGAAA+TGG + chr1_3:29762244-29762263 None:intergenic 25.0%
! CATATCCAAACAATATAAGA+TGG + chr1_3:29762581-29762600 None:intergenic 25.0%
! TTATATTGTTTGGATATGTG+TGG - chr1_3:29762583-29762602 Msa0113740:CDS 25.0%
! TTTATAGGTAGAGGAAAATT+AGG - chr1_3:29762671-29762690 Msa0113740:CDS 25.0%
!!! TTTTTAGGGTTTTTTGCTAT+CGG + chr1_3:29762870-29762889 None:intergenic 25.0%
!! ACATGATATAATCCTTTTAG+TGG + chr1_3:29762918-29762937 None:intergenic 25.0%
!!! TTGAATGTTTTAAAGGAAAG+TGG + chr1_3:29762958-29762977 None:intergenic 25.0%
!!! TGCTTCTTTGAATGTTTTAA+AGG + chr1_3:29762965-29762984 None:intergenic 25.0%
!!! CTCGTTCTTTTTTCTTTTTT+TGG - chr1_3:29763036-29763055 Msa0113740:intron 25.0%
! GATCGAAATAAAAGATAACA+AGG + chr1_3:29763101-29763120 None:intergenic 25.0%
! TATACCAAACAATCTTAAGT+GGG - chr1_3:29763256-29763275 Msa0113740:intron 25.0%
!! TTTTAGACTTAATATGGGAT+AGG - chr1_3:29763349-29763368 Msa0113740:intron 25.0%
!! TTTTTCTACTAATGAGGAAT+TGG + chr1_3:29763557-29763576 None:intergenic 25.0%
! TTCCTCATTAGTAGAAAAAT+AGG - chr1_3:29763558-29763577 Msa0113740:intron 25.0%
!!! TTCCTATTTTTCTACTAATG+AGG + chr1_3:29763563-29763582 None:intergenic 25.0%
! AAAAATAGGAATGATTGTCA+CGG - chr1_3:29763572-29763591 Msa0113740:CDS 25.0%
!!! ATTGTTTTTTTTACCACAGT+AGG - chr1_3:29763595-29763614 Msa0113740:CDS 25.0%
!!! TTGTTTTTTTTACCACAGTA+GGG - chr1_3:29763596-29763615 Msa0113740:CDS 25.0%
!! GATTAGTTCTCAAATTTATC+TGG - chr1_3:29763620-29763639 Msa0113740:CDS 25.0%
!! AAAGATATTACCAGTTTTCT+TGG - chr1_3:29763663-29763682 Msa0113740:CDS 25.0%
!! AAGATATTACCAGTTTTCTT+GGG - chr1_3:29763664-29763683 Msa0113740:CDS 25.0%
!! ATCACAATTCACACTTATTT+TGG + chr1_3:29763726-29763745 None:intergenic 25.0%
! ATACATTGGATATACAACTT+GGG - chr1_3:29763831-29763850 Msa0113740:intron 25.0%
! TTGTACATATGTAGTATAAG+AGG + chr1_3:29763941-29763960 None:intergenic 25.0%
! TACTTCACTAAAGAAAACAT+GGG + chr1_3:29764466-29764485 None:intergenic 25.0%
! TTACTTCACTAAAGAAAACA+TGG + chr1_3:29764467-29764486 None:intergenic 25.0%
! CGATTCAATTATTATAGTGT+TGG - chr1_3:29764561-29764580 Msa0113740:intron 25.0%
! TATTCCCAAAACTTTGATAA+TGG + chr1_3:29765379-29765398 None:intergenic 25.0%
!! TGTAATAATGTGACATTTTG+TGG - chr1_3:29765403-29765422 Msa0113740:intron 25.0%
!! GTAATAATGTGACATTTTGT+GGG - chr1_3:29765404-29765423 Msa0113740:intron 25.0%
!! ACGTAAAATACTTCTAAAGA+AGG + chr1_3:29765577-29765596 None:intergenic 25.0%
!!! TTTTACCTTGTTTATGTTTC+TGG - chr1_3:29765623-29765642 Msa0113740:intron 25.0%
!!! ATCTTTTTTCTTTCTTTGGT+TGG - chr1_3:29765685-29765704 Msa0113740:intron 25.0%
!!! CAAAATTTTAATAGACGTGA+AGG - chr1_3:29766075-29766094 Msa0113740:intron 25.0%
! GAATGTCTAATGATATTGAT+GGG - chr1_3:29766098-29766117 Msa0113740:intron 25.0%
! AAAACTTGAAAGAGAATATG+TGG - chr1_3:29766257-29766276 Msa0113740:intron 25.0%
! AAACTTGAAAGAGAATATGT+GGG - chr1_3:29766258-29766277 Msa0113740:intron 25.0%
! TTGAGATGATGTCAAATAAA+TGG - chr1_3:29766440-29766459 Msa0113740:CDS 25.0%
! GTCAAATAAATGGAAACTTA+CGG - chr1_3:29766450-29766469 Msa0113740:CDS 25.0%
! CACTCCTGAAAATTTATATA+AGG - chr1_3:29766488-29766507 Msa0113740:CDS 25.0%
! TAAGGATCTTATTAAGACAA+TGG - chr1_3:29766531-29766550 Msa0113740:CDS 25.0%
! AAGGATCTTATTAAGACAAT+GGG - chr1_3:29766532-29766551 Msa0113740:CDS 25.0%
! GTCATATAAGTAGTAAACAT+TGG + chr1_3:29766682-29766701 None:intergenic 25.0%
!!! GTACTGATTAATGCATTAAT+AGG - chr1_3:29767064-29767083 Msa0113740:five_prime_UTR 25.0%
!!! ATAGGTTTTATGATTTCATG+GGG - chr1_3:29767082-29767101 Msa0113740:five_prime_UTR 25.0%
! GAATGAGATTGATAACCTTA+GGG + chr1_3:29761494-29761513 None:intergenic 30.0%
! AGAATGAGATTGATAACCTT+AGG + chr1_3:29761495-29761514 None:intergenic 30.0%
! TGGAATTAATTTGACAGAAG+CGG + chr1_3:29761687-29761706 None:intergenic 30.0%
ATTAATTCCAAACACTTCAG+AGG - chr1_3:29761697-29761716 Msa0113740:CDS 30.0%
TGTATGATTTGATGAGAATC+AGG + chr1_3:29761737-29761756 None:intergenic 30.0%
! GATAAGTATTGTGAAATGGA+GGG + chr1_3:29762240-29762259 None:intergenic 30.0%
TTTCTCTCTCTACAGTAAAT+AGG - chr1_3:29762403-29762422 Msa0113740:CDS 30.0%
TCTCTACAGTAAATAGGTAA+GGG - chr1_3:29762409-29762428 Msa0113740:CDS 30.0%
! TTCACAATACTTGTCCATTT+TGG + chr1_3:29762503-29762522 None:intergenic 30.0%
! AATGGACAAGTATTGTGAAA+CGG - chr1_3:29762504-29762523 Msa0113740:CDS 30.0%
! AGTTCAACTTTTATAGGTAG+AGG - chr1_3:29762662-29762681 Msa0113740:CDS 30.0%
AACACAGTTAATGGAGAAAA+AGG + chr1_3:29762742-29762761 None:intergenic 30.0%
! TTTTTCTCCATTAACTGTGT+TGG - chr1_3:29762741-29762760 Msa0113740:CDS 30.0%
!!! TTTTAGGGTTTTTTGCTATC+GGG + chr1_3:29762869-29762888 None:intergenic 30.0%
CAAAAAACCCTAAAAATGAG+TGG - chr1_3:29762874-29762893 Msa0113740:intron 30.0%
!! ATATAATCCTTTTAGTGGAC+CGG + chr1_3:29762913-29762932 None:intergenic 30.0%
CTATACCAAACAATCTTAAG+TGG - chr1_3:29763255-29763274 Msa0113740:intron 30.0%
TAAACACTAAACCATTAGGT+GGG + chr1_3:29763464-29763483 None:intergenic 30.0%
ATAAACACTAAACCATTAGG+TGG + chr1_3:29763465-29763484 None:intergenic 30.0%
TGTTTATATATGCAGCTATC+AGG - chr1_3:29763478-29763497 Msa0113740:intron 30.0%
! AGATATTACCAGTTTTCTTG+GGG - chr1_3:29763665-29763684 Msa0113740:CDS 30.0%
TATTCATGACTTTGCTTTAG+AGG + chr1_3:29763770-29763789 None:intergenic 30.0%
CATACATTGGATATACAACT+TGG - chr1_3:29763830-29763849 Msa0113740:intron 30.0%
TTCATAGAAGTTAAAGAACG+TGG + chr1_3:29764153-29764172 None:intergenic 30.0%
!! ATAGCTATTTTCCAGCTTTA+GGG + chr1_3:29764218-29764237 None:intergenic 30.0%
!! AATAGCTATTTTCCAGCTTT+AGG + chr1_3:29764219-29764238 None:intergenic 30.0%
ATGATGCTTTGTATAATGCA+GGG + chr1_3:29764710-29764729 None:intergenic 30.0%
AAAATCACCAGTAAACAAGT+GGG + chr1_3:29764898-29764917 None:intergenic 30.0%
TTGGCTGAAAAAAAATACTG+GGG + chr1_3:29764927-29764946 None:intergenic 30.0%
CTTGGCTGAAAAAAAATACT+GGG + chr1_3:29764928-29764947 None:intergenic 30.0%
ACTTGGCTGAAAAAAAATAC+TGG + chr1_3:29764929-29764948 None:intergenic 30.0%
CTAACTATAGTTATTAACCC+CGG + chr1_3:29765309-29765328 None:intergenic 30.0%
AATAACTATAGTTAGGTCTC+AGG - chr1_3:29765314-29765333 Msa0113740:intron 30.0%
ATAACTATAGTTAGGTCTCA+GGG - chr1_3:29765315-29765334 Msa0113740:intron 30.0%
AAAATGGAGTGGGTAAAAAA+TGG + chr1_3:29765355-29765374 None:intergenic 30.0%
!! TGATAATGGAAAAATGGAGT+GGG + chr1_3:29765365-29765384 None:intergenic 30.0%
!! TTGATAATGGAAAAATGGAG+TGG + chr1_3:29765366-29765385 None:intergenic 30.0%
ACCCTTCAAAACTATAGTAA+TGG - chr1_3:29765453-29765472 Msa0113740:intron 30.0%
!!! CCCATTACTATAGTTTTGAA+GGG + chr1_3:29765457-29765476 None:intergenic 30.0%
CCCTTCAAAACTATAGTAAT+GGG - chr1_3:29765454-29765473 Msa0113740:intron 30.0%
CCTTCAAAACTATAGTAATG+GGG - chr1_3:29765455-29765474 Msa0113740:intron 30.0%
! AATTCTCCTCTGAAAGAATT+TGG + chr1_3:29765842-29765861 None:intergenic 30.0%
TCTGGAAAATTTGAGGAAAA+CGG - chr1_3:29765895-29765914 Msa0113740:intron 30.0%
AGGAAACATTCAACAAAATG+AGG - chr1_3:29765918-29765937 Msa0113740:intron 30.0%
GGAAACATTCAACAAAATGA+GGG - chr1_3:29765919-29765938 Msa0113740:intron 30.0%
GGAATGTCTAATGATATTGA+TGG - chr1_3:29766097-29766116 Msa0113740:intron 30.0%
TCAAATTGTTGAGACAATGA+AGG - chr1_3:29766126-29766145 Msa0113740:intron 30.0%
!!! CAATACAGCTTCAGTTTTTT+CGG + chr1_3:29766221-29766240 None:intergenic 30.0%
AAAAACTGAAGCTGTATTGA+AGG - chr1_3:29766222-29766241 Msa0113740:intron 30.0%
CATTTGAAAAGTTAAAGCAC+GGG + chr1_3:29766983-29767002 None:intergenic 30.0%
GCATTTGAAAAGTTAAAGCA+CGG + chr1_3:29766984-29767003 None:intergenic 30.0%
! TATAAGAGCAGAAGGGTTTT+TGG - chr1_3:29761358-29761377 Msa0113740:three_prime_UTR 35.0%
! ATAAGAGCAGAAGGGTTTTT+GGG - chr1_3:29761359-29761378 Msa0113740:three_prime_UTR 35.0%
! CTGAATTGTTATTAAGCCCT+TGG + chr1_3:29761652-29761671 None:intergenic 35.0%
CAAGGGCTTAATAACAATTC+AGG - chr1_3:29761650-29761669 Msa0113740:CDS 35.0%
ATTTGATGAGAATCAGGAAC+AGG + chr1_3:29761731-29761750 None:intergenic 35.0%
TGAAATAGACATCAATGAGC+TGG - chr1_3:29761946-29761965 Msa0113740:CDS 35.0%
AATTAAGCAGGCAAGAGATT+GGG - chr1_3:29762110-29762129 Msa0113740:CDS 35.0%
AAGGCGTAAAATGTATGGAA+GGG - chr1_3:29762153-29762172 Msa0113740:CDS 35.0%
! GGATAAGTATTGTGAAATGG+AGG + chr1_3:29762241-29762260 None:intergenic 35.0%
CTCTCTACAGTAAATAGGTA+AGG - chr1_3:29762408-29762427 Msa0113740:CDS 35.0%
GAGTCCCATCTTATATTGTT+TGG - chr1_3:29762573-29762592 Msa0113740:CDS 35.0%
AGGAAAATTAGGTCAAACCA+TGG - chr1_3:29762682-29762701 Msa0113740:CDS 35.0%
TAACGAGTACTTAACAACCA+TGG + chr1_3:29762702-29762721 None:intergenic 35.0%
! GTTAATGGAGAAAAAGGTGT+GGG + chr1_3:29762736-29762755 None:intergenic 35.0%
AGTTAATGGAGAAAAAGGTG+TGG + chr1_3:29762737-29762756 None:intergenic 35.0%
!! TATAATCCTTTTAGTGGACC+GGG + chr1_3:29762912-29762931 None:intergenic 35.0%
! TTAAAGGAAAGTGGACTTTC+CGG + chr1_3:29762949-29762968 None:intergenic 35.0%
AGATCCCACTTAAGATTGTT+TGG + chr1_3:29763263-29763282 None:intergenic 35.0%
ATCTCAAGTTTGACAACCAT+GGG - chr1_3:29763279-29763298 Msa0113740:intron 35.0%
AATTATGATGGTTTGACCCA+TGG + chr1_3:29763298-29763317 None:intergenic 35.0%
GGGTCAAACCATCATAATTT+AGG - chr1_3:29763299-29763318 Msa0113740:intron 35.0%
ATGAGCCAATCACACATAAT+TGG - chr1_3:29763394-29763413 Msa0113740:CDS 35.0%
AAACACTAAACCATTAGGTG+GGG + chr1_3:29763463-29763482 None:intergenic 35.0%
! TTTTGCAGTGAGTCATACAT+TGG - chr1_3:29763817-29763836 Msa0113740:intron 35.0%
CAGCAACTTAATGAGGTTTA+GGG + chr1_3:29764056-29764075 None:intergenic 35.0%
TCAGCAACTTAATGAGGTTT+AGG + chr1_3:29764057-29764076 None:intergenic 35.0%
ATAGAAGTTAAAGAACGTGG+AGG + chr1_3:29764150-29764169 None:intergenic 35.0%
TGAAATAACCTTGACAACCA+TGG - chr1_3:29764169-29764188 Msa0113740:intron 35.0%
!! TAGCTATTTTCCAGCTTTAG+GGG + chr1_3:29764217-29764236 None:intergenic 35.0%
TGAAAGAATGTTATGCAAGC+TGG + chr1_3:29764250-29764269 None:intergenic 35.0%
TTTATCTGCAAAAAGCTCGT+TGG + chr1_3:29764353-29764372 None:intergenic 35.0%
ATTCAGCAAGCTCATAATCT+GGG + chr1_3:29764388-29764407 None:intergenic 35.0%
AATTCAGCAAGCTCATAATC+TGG + chr1_3:29764389-29764408 None:intergenic 35.0%
TTATCATAGCACAGCTTCAT+AGG - chr1_3:29764425-29764444 Msa0113740:intron 35.0%
CATGATGCTTTGTATAATGC+AGG + chr1_3:29764711-29764730 None:intergenic 35.0%
!!! CATGTTGTGTTTTGATTGAG+TGG - chr1_3:29764727-29764746 Msa0113740:intron 35.0%
!!! TGTTTTGATTGAGTGGTCAT+TGG - chr1_3:29764734-29764753 Msa0113740:intron 35.0%
! AGCTTTTGTTCCCCATATTA+GGG + chr1_3:29764775-29764794 None:intergenic 35.0%
TGGGATGATGAAAAGAAGTT+TGG + chr1_3:29764879-29764898 None:intergenic 35.0%
GAAAATCACCAGTAAACAAG+TGG + chr1_3:29764899-29764918 None:intergenic 35.0%
GAAAGTCAAACAAGTGAACT+TGG + chr1_3:29764946-29764965 None:intergenic 35.0%
! TTTGACTTTCTTCAACGTGT+TGG - chr1_3:29764956-29764975 Msa0113740:intron 35.0%
! GATTCATGCATTTTCTCTGT+TGG - chr1_3:29764998-29765017 Msa0113740:intron 35.0%
!!! GAGCAGAGAATGAGTTTTTT+TGG + chr1_3:29765031-29765050 None:intergenic 35.0%
CTCGTGAGATCAAAATTTGT+TGG + chr1_3:29765138-29765157 None:intergenic 35.0%
GCTGCATAAAACAGTATGAA+TGG + chr1_3:29765162-29765181 None:intergenic 35.0%
TAAGTTGTACCCATATCCTT+TGG - chr1_3:29765221-29765240 Msa0113740:intron 35.0%
ACCCATATCCTTTGGTATAT+TGG - chr1_3:29765229-29765248 Msa0113740:intron 35.0%
GCCAATATACCAAAGGATAT+GGG + chr1_3:29765233-29765252 None:intergenic 35.0%
AACTTCAAAACTGCTACAAC+AGG + chr1_3:29765259-29765278 None:intergenic 35.0%
CGGGGTTAATAACTATAGTT+AGG - chr1_3:29765307-29765326 Msa0113740:intron 35.0%
!!! CCCCATTACTATAGTTTTGA+AGG + chr1_3:29765458-29765477 None:intergenic 35.0%
! TCAAAACTATAGTAATGGGG+AGG - chr1_3:29765458-29765477 Msa0113740:intron 35.0%
! ATAGTAATGGGGAGGAAAAA+TGG - chr1_3:29765466-29765485 Msa0113740:intron 35.0%
! GAATGGTTCGTTTCCTTTTT+GGG - chr1_3:29765520-29765539 Msa0113740:intron 35.0%
TGGAACCAGAAACATAAACA+AGG + chr1_3:29765631-29765650 None:intergenic 35.0%
CATGTTCCAAATTCTTTCAG+AGG - chr1_3:29765833-29765852 Msa0113740:intron 35.0%
TTCAACAAAATGAGGGAGTT+AGG - chr1_3:29765926-29765945 Msa0113740:intron 35.0%
!! CGTGTTACTTATGATGGAAA+AGG - chr1_3:29766024-29766043 Msa0113740:intron 35.0%
GAAGAAAATTGAAGAAGCAG+AGG - chr1_3:29766411-29766430 Msa0113740:CDS 35.0%
AAGGCATAAGATGCTAAACA+AGG - chr1_3:29766507-29766526 Msa0113740:CDS 35.0%
AGGCATAAGATGCTAAACAA+GGG - chr1_3:29766508-29766527 Msa0113740:CDS 35.0%
TAAGATGCTAAACAAGGGTA+AGG - chr1_3:29766513-29766532 Msa0113740:CDS 35.0%
TGTCTCTTTATGTTCAAGCA+GGG - chr1_3:29766599-29766618 Msa0113740:CDS 35.0%
AGAAAATCTTCTCTGCGTTA+TGG + chr1_3:29766738-29766757 None:intergenic 35.0%
! GAAACTGGAGTTTTCCTAAA+CGG + chr1_3:29766925-29766944 None:intergenic 35.0%
CAATCAAGCAAATCAGAAAC+TGG + chr1_3:29766940-29766959 None:intergenic 35.0%
!! GTTTCTGATTTGCTTGATTG+AGG - chr1_3:29766940-29766959 Msa0113740:intron 35.0%
!!! AGGGTTTTTGGGTTTTGGTT+AGG - chr1_3:29761370-29761389 Msa0113740:three_prime_UTR 40.0%
!!! GGGTTTTTGGGTTTTGGTTA+GGG - chr1_3:29761371-29761390 Msa0113740:three_prime_UTR 40.0%
TCTGTGACCAACAAGTATGT+GGG - chr1_3:29761441-29761460 Msa0113740:three_prime_UTR 40.0%
! AGATTGATAACCTTAGGGTG+AGG + chr1_3:29761489-29761508 None:intergenic 40.0%
AATTCCAAACACTTCAGAGG+AGG - chr1_3:29761700-29761719 Msa0113740:CDS 40.0%
TGTCTATTTCAGCAGTGTCA+CGG + chr1_3:29761937-29761956 None:intergenic 40.0%
GAGACGTTCAGAACTATTCA+AGG - chr1_3:29762021-29762040 Msa0113740:CDS 40.0%
AAGGCGATTGTAAGTGTTTC+AGG - chr1_3:29762040-29762059 Msa0113740:CDS 40.0%
GAATTAAGCAGGCAAGAGAT+TGG - chr1_3:29762109-29762128 Msa0113740:CDS 40.0%
! TGGCATTGAATAGTCTTCGA+AGG - chr1_3:29762134-29762153 Msa0113740:CDS 40.0%
! CTTCGAAGGCGTAAAATGTA+TGG - chr1_3:29762148-29762167 Msa0113740:CDS 40.0%
! GAAGGCGTAAAATGTATGGA+AGG - chr1_3:29762152-29762171 Msa0113740:CDS 40.0%
! GACAAGTATTGTGAAACGGA+GGG - chr1_3:29762508-29762527 Msa0113740:CDS 40.0%
GTTTGGATATGTGTGGAGAT+TGG - chr1_3:29762590-29762609 Msa0113740:CDS 40.0%
ATATGTGTGGAGATTGGAGA+AGG - chr1_3:29762596-29762615 Msa0113740:CDS 40.0%
AAACCCTAAAAATGAGTGGC+AGG - chr1_3:29762878-29762897 Msa0113740:intron 40.0%
TTATATCATGTGACCCGATC+CGG - chr1_3:29762927-29762946 Msa0113740:intron 40.0%
GATCTCAAGTTTGACAACCA+TGG - chr1_3:29763278-29763297 Msa0113740:intron 40.0%
CTCTGCCAATTATGTGTGAT+TGG + chr1_3:29763402-29763421 None:intergenic 40.0%
ACACATAATTGGCAGAGCAA+TGG - chr1_3:29763405-29763424 Msa0113740:CDS 40.0%
! TATCTCTCATTGACTGCTCA+GGG + chr1_3:29764033-29764052 None:intergenic 40.0%
CCATGTTCAGCAACTTAATG+AGG + chr1_3:29764063-29764082 None:intergenic 40.0%
! CCTCATTAAGTTGCTGAACA+TGG - chr1_3:29764060-29764079 Msa0113740:intron 40.0%
AACATGGCCAAATAGGTTCT+TGG - chr1_3:29764076-29764095 Msa0113740:intron 40.0%
TGGAAATAGAGTCACATCCA+TGG + chr1_3:29764189-29764208 None:intergenic 40.0%
! ATATGGACTGCTCAATCCTT+TGG - chr1_3:29764272-29764291 Msa0113740:intron 40.0%
CTTGCAGACATTCTTACCAA+AGG + chr1_3:29764291-29764310 None:intergenic 40.0%
TGGTAAGAATGTCTGCAAGT+TGG - chr1_3:29764292-29764311 Msa0113740:intron 40.0%
TACTCGTATGTACCTTCACA+AGG + chr1_3:29764318-29764337 None:intergenic 40.0%
!! AAAGAAAACATGGGCTGGAA+TGG + chr1_3:29764457-29764476 None:intergenic 40.0%
TCACTAAAGAAAACATGGGC+TGG + chr1_3:29764462-29764481 None:intergenic 40.0%
ACATTACCTGTCATGCTTTC+AGG - chr1_3:29764679-29764698 Msa0113740:intron 40.0%
CATTACCTGTCATGCTTTCA+GGG - chr1_3:29764680-29764699 Msa0113740:intron 40.0%
ATTACCTGTCATGCTTTCAG+GGG - chr1_3:29764681-29764700 Msa0113740:intron 40.0%
ATGCTTTGTATAATGCAGGG+AGG + chr1_3:29764707-29764726 None:intergenic 40.0%
TTTGATTGAGTGGTCATTGG+AGG - chr1_3:29764737-29764756 Msa0113740:intron 40.0%
TTGGTTGCCAAACCCTAATA+TGG - chr1_3:29764760-29764779 Msa0113740:intron 40.0%
TGGTTGCCAAACCCTAATAT+GGG - chr1_3:29764761-29764780 Msa0113740:intron 40.0%
TTGTTCCCCATATTAGGGTT+TGG + chr1_3:29764770-29764789 None:intergenic 40.0%
! GAGCTTTTGTTCCCCATATT+AGG + chr1_3:29764776-29764795 None:intergenic 40.0%
TAGGAAGAGGAAGAGTAAAG+TGG + chr1_3:29764798-29764817 None:intergenic 40.0%
TCATCATCCCACTTGTTTAC+TGG - chr1_3:29764888-29764907 Msa0113740:intron 40.0%
GAAAAAAAATACTGGGGCTC+TGG + chr1_3:29764921-29764940 None:intergenic 40.0%
! TGTTGGTTGCTTATCACTCT+CGG - chr1_3:29764973-29764992 Msa0113740:intron 40.0%
TGGGTACAACTTACAACACA+AGG + chr1_3:29765214-29765233 None:intergenic 40.0%
GGCCAATATACCAAAGGATA+TGG + chr1_3:29765234-29765253 None:intergenic 40.0%
TCAAAACTGCTACAACAGGA+TGG + chr1_3:29765255-29765274 None:intergenic 40.0%
!!! TGTAGCAGTTTTGAAGTTGC+CGG - chr1_3:29765261-29765280 Msa0113740:intron 40.0%
! GGAATGGTTCGTTTCCTTTT+TGG - chr1_3:29765519-29765538 Msa0113740:intron 40.0%
CCTGCAATATATGCCCAAAA+AGG + chr1_3:29765536-29765555 None:intergenic 40.0%
!! CCTTTTTGGGCATATATTGC+AGG - chr1_3:29765533-29765552 Msa0113740:intron 40.0%
CTTTCTTTGGTTGGAACTGT+AGG - chr1_3:29765694-29765713 Msa0113740:intron 40.0%
GATTTGATTGCCAAATTGCG+TGG - chr1_3:29765782-29765801 Msa0113740:intron 40.0%
! GGTATTTTTCTGCCTTTGGT+AGG + chr1_3:29765808-29765827 None:intergenic 40.0%
!! TCGAGGTATTTTTCTGCCTT+TGG + chr1_3:29765812-29765831 None:intergenic 40.0%
! AAGAATTTGGAACATGCTCG+AGG + chr1_3:29765829-29765848 None:intergenic 40.0%
! GTGCTAGTCTGGAAAATTTG+AGG - chr1_3:29765888-29765907 Msa0113740:intron 40.0%
GGAAAATTTGAGGAAAACGG+AGG - chr1_3:29765898-29765917 Msa0113740:intron 40.0%
TTGCAAGCAAATGCTGTAAC+AGG + chr1_3:29765956-29765975 None:intergenic 40.0%
!! AGCTGACGTGTTACTTATGA+TGG - chr1_3:29766018-29766037 Msa0113740:intron 40.0%
GCTGTATTGAAGGAGATTGA+AGG - chr1_3:29766232-29766251 Msa0113740:intron 40.0%
CATAAAGGCGAAGCAAAGTT+GGG + chr1_3:29766288-29766307 None:intergenic 40.0%
CTTCGCCTTTATGCAATTCT+GGG - chr1_3:29766295-29766314 Msa0113740:intron 40.0%
CCTTTATGCAATTCTGGGTA+GGG - chr1_3:29766300-29766319 Msa0113740:intron 40.0%
ATAAATGGAAACTTACGGCC+AGG - chr1_3:29766455-29766474 Msa0113740:CDS 40.0%
GGAGATAGTAGATGCACAAT+AGG - chr1_3:29766553-29766572 Msa0113740:CDS 40.0%
GTGTCTCTTTATGTTCAAGC+AGG - chr1_3:29766598-29766617 Msa0113740:CDS 40.0%
GTCTCTTTATGTTCAAGCAG+GGG - chr1_3:29766600-29766619 Msa0113740:CDS 40.0%
TTATGGAGCAGTATGCAAAG+AGG - chr1_3:29766704-29766723 Msa0113740:CDS 40.0%
TATGGAGCAGTATGCAAAGA+GGG - chr1_3:29766705-29766724 Msa0113740:CDS 40.0%
! ATGGGGTTCATTTGTTGAGT+AGG - chr1_3:29767099-29767118 Msa0113740:five_prime_UTR 40.0%
! ATAGGGGGTATAAGAGCAGA+AGG - chr1_3:29761350-29761369 Msa0113740:three_prime_UTR 45.0%
! TAGGGGGTATAAGAGCAGAA+GGG - chr1_3:29761351-29761370 Msa0113740:three_prime_UTR 45.0%
!!! GCAGAAGGGTTTTTGGGTTT+TGG - chr1_3:29761365-29761384 Msa0113740:three_prime_UTR 45.0%
CTCTGTGACCAACAAGTATG+TGG - chr1_3:29761440-29761459 Msa0113740:three_prime_UTR 45.0%
! GTAAATCTGTGGGAAGCATG+AGG + chr1_3:29761791-29761810 None:intergenic 45.0%
GGTGGTGAGAGTAAATCTGT+GGG + chr1_3:29761801-29761820 None:intergenic 45.0%
TGATGCTAGCAGCCAAAAAG+AGG - chr1_3:29761841-29761860 Msa0113740:CDS 45.0%
CAGCCAAAAAGAGGATGATG+CGG - chr1_3:29761850-29761869 Msa0113740:CDS 45.0%
! CATCCGCATCATCCTCTTTT+TGG + chr1_3:29761856-29761875 None:intergenic 45.0%
CATCAATGAGCTGGAGTTGT+CGG - chr1_3:29761955-29761974 Msa0113740:CDS 45.0%
TTGATACTGCTCTCGACAAG+TGG - chr1_3:29762071-29762090 Msa0113740:CDS 45.0%
TGATACTGCTCTCGACAAGT+GGG - chr1_3:29762072-29762091 Msa0113740:CDS 45.0%
!! CTCGACAAGTGGGTTGAAAA+AGG - chr1_3:29762082-29762101 Msa0113740:CDS 45.0%
AATGTATGGAAGGGCTTTGC+AGG - chr1_3:29762162-29762181 Msa0113740:CDS 45.0%
! GGACAAGTATTGTGAAACGG+AGG - chr1_3:29762507-29762526 Msa0113740:CDS 45.0%
GTCCTTAAGGAAGCTTCTAC+GGG + chr1_3:29762622-29762641 None:intergenic 45.0%
CGTCCTTAAGGAAGCTTCTA+CGG + chr1_3:29762623-29762642 None:intergenic 45.0%
CGTAGAAGCTTCCTTAAGGA+CGG - chr1_3:29762621-29762640 Msa0113740:CDS 45.0%
CTCCATTAACTGTGTTGGAG+CGG - chr1_3:29762746-29762765 Msa0113740:CDS 45.0%
GTGCAAGATCGTGATATCGT+GGG - chr1_3:29762792-29762811 Msa0113740:intron 45.0%
!! TTTTGCTATCGGGTTAGGTC+AGG + chr1_3:29762859-29762878 None:intergenic 45.0%
!!! GGGTTTTTTGCTATCGGGTT+AGG + chr1_3:29762864-29762883 None:intergenic 45.0%
CAGAGTCTCAATTGCAGTCT+CGG - chr1_3:29762983-29763002 Msa0113740:intron 45.0%
GGATATTTGACCCCACCTAA+TGG - chr1_3:29763450-29763469 Msa0113740:intron 45.0%
GAGAACTAATCACCCTACTG+TGG + chr1_3:29763611-29763630 None:intergenic 45.0%
!! ACCAGTTTTCTTGGGGTGTT+TGG - chr1_3:29763672-29763691 Msa0113740:CDS 45.0%
ACCAAACACCCCAAGAAAAC+TGG + chr1_3:29763676-29763695 None:intergenic 45.0%
GAGGTTTCGATTCTCGTACT+TGG + chr1_3:29763751-29763770 None:intergenic 45.0%
GGGTGAGGAGGCTATTTATT+TGG + chr1_3:29764013-29764032 None:intergenic 45.0%
! GTATCTCTCATTGACTGCTC+AGG + chr1_3:29764034-29764053 None:intergenic 45.0%
GTTGCTGAACATGGCCAAAT+AGG - chr1_3:29764069-29764088 Msa0113740:intron 45.0%
GATGTGGCCAAGAACCTATT+TGG + chr1_3:29764086-29764105 None:intergenic 45.0%
! TTGCGAGGCAATTTAGGATG+TGG + chr1_3:29764102-29764121 None:intergenic 45.0%
TGTGAGTTGCGAGGCAATTT+AGG + chr1_3:29764108-29764127 None:intergenic 45.0%
CCTATGTATTGTGAGTTGCG+AGG + chr1_3:29764117-29764136 None:intergenic 45.0%
CCTCGCAACTCACAATACAT+AGG - chr1_3:29764114-29764133 Msa0113740:intron 45.0%
GTTAAAGAACGTGGAGGTTG+TGG + chr1_3:29764144-29764163 None:intergenic 45.0%
AGTCACATCCATGGTTGTCA+AGG + chr1_3:29764180-29764199 None:intergenic 45.0%
ATCTGCAAAAAGCTCGTTGG+TGG + chr1_3:29764350-29764369 None:intergenic 45.0%
! CTTGCTGAATTGCTGATTGC+TGG - chr1_3:29764398-29764417 Msa0113740:intron 45.0%
!! AAACATGGGCTGGAATGGAA+TGG + chr1_3:29764452-29764471 None:intergenic 45.0%
ATTGAGTGGTCATTGGAGGT+TGG - chr1_3:29764741-29764760 Msa0113740:intron 45.0%
GGTTGCCAAACCCTAATATG+GGG - chr1_3:29764762-29764781 Msa0113740:intron 45.0%
TGAAAGTTCAGCACAGAGGT+GGG + chr1_3:29764855-29764874 None:intergenic 45.0%
AGTTAGACGAGAGAGAGAGT+GGG + chr1_3:29765053-29765072 None:intergenic 45.0%
AAGTTAGACGAGAGAGAGAG+TGG + chr1_3:29765054-29765073 None:intergenic 45.0%
CAGGATGGCCAATATACCAA+AGG + chr1_3:29765240-29765259 None:intergenic 45.0%
!!! GTAGCAGTTTTGAAGTTGCC+GGG - chr1_3:29765262-29765281 Msa0113740:intron 45.0%
GGAGTGGGTAAAAAATGGAG+TGG + chr1_3:29765350-29765369 None:intergenic 45.0%
AATGGGGAGGAAAAATGGAG+AGG - chr1_3:29765471-29765490 Msa0113740:intron 45.0%
GTTTGACTCTAGCCAATCCA+AGG + chr1_3:29765720-29765739 None:intergenic 45.0%
ACTAGCTAACTGTGCTAGTC+TGG - chr1_3:29765877-29765896 Msa0113740:intron 45.0%
GTTGAGACAATGAAGGCAGA+AGG - chr1_3:29766133-29766152 Msa0113740:intron 45.0%
GTGAACTGGACCATCTAACA+CGG - chr1_3:29766158-29766177 Msa0113740:intron 45.0%
TGAACTGGACCATCTAACAC+GGG - chr1_3:29766159-29766178 Msa0113740:intron 45.0%
GCATAAAGGCGAAGCAAAGT+TGG + chr1_3:29766289-29766308 None:intergenic 45.0%
GCTTCGCCTTTATGCAATTC+TGG - chr1_3:29766294-29766313 Msa0113740:intron 45.0%
GCCTTTATGCAATTCTGGGT+AGG - chr1_3:29766299-29766318 Msa0113740:intron 45.0%
CCCTACCCAGAATTGCATAA+AGG + chr1_3:29766303-29766322 None:intergenic 45.0%
AGGTTTGTGAGTCAAAGCCA+CGG - chr1_3:29766347-29766366 Msa0113740:CDS 45.0%
CCTTGCTGCAATTGAAGCTT+GGG - chr1_3:29766381-29766400 Msa0113740:CDS 45.0%
CTTGCTGCAATTGAAGCTTG+GGG - chr1_3:29766382-29766401 Msa0113740:CDS 45.0%
CACAATAGGTCCAACAACCT+GGG - chr1_3:29766567-29766586 Msa0113740:CDS 45.0%
ATGGAGCAGTATGCAAAGAG+GGG - chr1_3:29766706-29766725 Msa0113740:CDS 45.0%
AACGCCAAACTACCAGCATA+TGG - chr1_3:29766826-29766845 Msa0113740:CDS 45.0%
ACGCCAAACTACCAGCATAT+GGG - chr1_3:29766827-29766846 Msa0113740:intron 45.0%
GATCCCATATGCTGGTAGTT+TGG + chr1_3:29766833-29766852 None:intergenic 45.0%
AACTACCAGCATATGGGATC+AGG - chr1_3:29766833-29766852 Msa0113740:intron 45.0%
ACTACCAGCATATGGGATCA+GGG - chr1_3:29766834-29766853 Msa0113740:intron 45.0%
!! CCAAAGCTTTGTTGGGGAAT+AGG + chr1_3:29766879-29766898 None:intergenic 45.0%
CCTATTCCCCAACAAAGCTT+TGG - chr1_3:29766876-29766895 Msa0113740:intron 45.0%
!! TATTTATATATCATAATTAA+GGG + chr1_3:29763167-29763186 None:intergenic 5.0%
!! TTATTTATATATCATAATTA+AGG + chr1_3:29763168-29763187 None:intergenic 5.0%
CGAAGAGCCCACATACTTGT+TGG + chr1_3:29761451-29761470 None:intergenic 50.0%
!! ACAGCCTCCTCTGAAGTGTT+TGG + chr1_3:29761707-29761726 None:intergenic 50.0%
! TGTGGGAAGCATGAGGTATG+TGG + chr1_3:29761784-29761803 None:intergenic 50.0%
GGGTGGTGAGAGTAAATCTG+TGG + chr1_3:29761802-29761821 None:intergenic 50.0%
AGCCTGTGAGGAAAGTTCAC+GGG + chr1_3:29761822-29761841 None:intergenic 50.0%
CAGCCTGTGAGGAAAGTTCA+CGG + chr1_3:29761823-29761842 None:intergenic 50.0%
TGCGGATGATCGTGATGACA+TGG - chr1_3:29761868-29761887 Msa0113740:CDS 50.0%
TTGACTGAGCCAGATGCAGA+CGG - chr1_3:29761905-29761924 Msa0113740:CDS 50.0%
AAGCAGGCAAGAGATTGGGT+TGG - chr1_3:29762114-29762133 Msa0113740:CDS 50.0%
CCTCTGATGAACCGTCCTTA+AGG + chr1_3:29762635-29762654 None:intergenic 50.0%
CCTTAAGGACGGTTCATCAG+AGG - chr1_3:29762632-29762651 Msa0113740:CDS 50.0%
CACCGCTCCAACACAGTTAA+TGG + chr1_3:29762751-29762770 None:intergenic 50.0%
GGTGCAAGATCGTGATATCG+TGG - chr1_3:29762791-29762810 Msa0113740:intron 50.0%
GGTGACAAAACCTTCACCAC+CGG + chr1_3:29762838-29762857 None:intergenic 50.0%
!! GCGCCTGCCACTCATTTTTA+GGG + chr1_3:29762884-29762903 None:intergenic 50.0%
!! TGCGCCTGCCACTCATTTTT+AGG + chr1_3:29762885-29762904 None:intergenic 50.0%
! GAAAGTGGACTTTCCGGATC+GGG + chr1_3:29762943-29762962 None:intergenic 50.0%
! GGAAAGTGGACTTTCCGGAT+CGG + chr1_3:29762944-29762963 None:intergenic 50.0%
TTCCAACACTCCCCTAAAGC+TGG - chr1_3:29764204-29764223 Msa0113740:intron 50.0%
!! TTCCAGCTTTAGGGGAGTGT+TGG + chr1_3:29764209-29764228 None:intergenic 50.0%
!! TCTGCAAGTTGGCCTTGTGA+AGG - chr1_3:29764303-29764322 Msa0113740:intron 50.0%
GGCAATGGCACAATAGGAAG+AGG + chr1_3:29764811-29764830 None:intergenic 50.0%
GAAAGTTCAGCACAGAGGTG+GGG + chr1_3:29764854-29764873 None:intergenic 50.0%
CTGAAAGTTCAGCACAGAGG+TGG + chr1_3:29764856-29764875 None:intergenic 50.0%
TGGCTGAAAGTTCAGCACAG+AGG + chr1_3:29764859-29764878 None:intergenic 50.0%
!!! CAGTTTTGAAGTTGCCGGGT+TGG - chr1_3:29765266-29765285 Msa0113740:intron 50.0%
GCTGCATTGAATGACCAACC+CGG + chr1_3:29765283-29765302 None:intergenic 50.0%
GGTCATTCAATGCAGCTCTC+CGG - chr1_3:29765287-29765306 Msa0113740:intron 50.0%
GTCATTCAATGCAGCTCTCC+GGG - chr1_3:29765288-29765307 Msa0113740:intron 50.0%
TCATTCAATGCAGCTCTCCG+GGG - chr1_3:29765289-29765308 Msa0113740:intron 50.0%
AGGATCCCAACTCGTTTGCA+GGG - chr1_3:29765491-29765510 Msa0113740:intron 50.0%
TTGGTTGGAACTGTAGGCCT+TGG - chr1_3:29765700-29765719 Msa0113740:intron 50.0%
TGGAACTGTAGGCCTTGGAT+TGG - chr1_3:29765705-29765724 Msa0113740:intron 50.0%
CTTTGGTAGGCCACGCAATT+TGG + chr1_3:29765795-29765814 None:intergenic 50.0%
CAAATTGCGTGGCCTACCAA+AGG - chr1_3:29765793-29765812 Msa0113740:intron 50.0%
GAAGGCAGAAGGTTGTGAAC+TGG - chr1_3:29766144-29766163 Msa0113740:intron 50.0%
CCAAAGATGCCCGTGTTAGA+TGG + chr1_3:29766171-29766190 None:intergenic 50.0%
CCATCTAACACGGGCATCTT+TGG - chr1_3:29766168-29766187 Msa0113740:intron 50.0%
!! TTTTTCGGTAAGCCCAGCTG+TGG + chr1_3:29766206-29766225 None:intergenic 50.0%
GGTTTGTGAGTCAAAGCCAC+GGG - chr1_3:29766348-29766367 Msa0113740:CDS 50.0%
GCCTTGCTGCAATTGAAGCT+TGG - chr1_3:29766380-29766399 Msa0113740:CDS 50.0%
CCCAAGCTTCAATTGCAGCA+AGG + chr1_3:29766384-29766403 None:intergenic 50.0%
!! CAGGAGTGCTTCGTAATTCC+TGG + chr1_3:29766476-29766495 None:intergenic 50.0%
GCACAATAGGTCCAACAACC+TGG - chr1_3:29766566-29766585 Msa0113740:CDS 50.0%
ACAAGTGCATCCCAGGTTGT+TGG + chr1_3:29766580-29766599 None:intergenic 50.0%
AAGAGACACAAGTGCATCCC+AGG + chr1_3:29766587-29766606 None:intergenic 50.0%
TCAAGCAGGGGAAGTCGAAA+AGG - chr1_3:29766612-29766631 Msa0113740:CDS 50.0%
! GGCAGACACTGTTTTGCAGA+AGG - chr1_3:29766633-29766652 Msa0113740:CDS 50.0%
CATAAGCCTGTGCTAGAGCA+TGG + chr1_3:29766804-29766823 None:intergenic 50.0%
!! TGGGCAGCCAAAGCTTTGTT+GGG + chr1_3:29766886-29766905 None:intergenic 50.0%
TGGCGCAACTTGATCCGTTT+AGG - chr1_3:29766908-29766927 Msa0113740:intron 50.0%
GTGGGCTCTTCGCAGAACTT+CGG - chr1_3:29761459-29761478 Msa0113740:three_prime_UTR 55.0%
AGCATGAGGTATGTGGCGGT+CGG + chr1_3:29761777-29761796 None:intergenic 55.0%
! GGGAAGCATGAGGTATGTGG+CGG + chr1_3:29761781-29761800 None:intergenic 55.0%
CTGTGAGGAAAGTTCACGGG+TGG + chr1_3:29761819-29761838 None:intergenic 55.0%
CACCCGTGAACTTTCCTCAC+AGG - chr1_3:29761817-29761836 Msa0113740:CDS 55.0%
GGCCCGTAGAAGCTTCCTTA+AGG - chr1_3:29762617-29762636 Msa0113740:CDS 55.0%
ACTGTGTTGGAGCGGTGCAA+AGG - chr1_3:29762754-29762773 Msa0113740:CDS 55.0%
CAGCAACCCGGTCCACTAAA+AGG - chr1_3:29762903-29762922 Msa0113740:intron 55.0%
ATTGACTGCTCAGGGTGAGG+AGG + chr1_3:29764025-29764044 None:intergenic 55.0%
! CTCATTGACTGCTCAGGGTG+AGG + chr1_3:29764028-29764047 None:intergenic 55.0%
CCAGTGGGCAATGGCACAAT+AGG + chr1_3:29764817-29764836 None:intergenic 55.0%
! CCTATTGTGCCATTGCCCAC+TGG - chr1_3:29764814-29764833 Msa0113740:intron 55.0%
GCAGTAGGGTTTCGTCCAGT+GGG + chr1_3:29764832-29764851 None:intergenic 55.0%
GAGGATCCCAACTCGTTTGC+AGG - chr1_3:29765490-29765509 Msa0113740:intron 55.0%
GGATCCCAACTCGTTTGCAG+GGG - chr1_3:29765492-29765511 Msa0113740:intron 55.0%
CTCTCCCCTGCAAACGAGTT+GGG + chr1_3:29765499-29765518 None:intergenic 55.0%
CAACTCGTTTGCAGGGGAGA+GGG - chr1_3:29765498-29765517 Msa0113740:intron 55.0%
TAACACGGGCATCTTTGGCC+AGG - chr1_3:29766173-29766192 Msa0113740:intron 55.0%
CCAGGCATTATGCCACAGCT+GGG - chr1_3:29766191-29766210 Msa0113740:intron 55.0%
TCTGGGTAGGGCTGATGAAG+TGG - chr1_3:29766312-29766331 Msa0113740:intron 55.0%
! TGAGTCAAAGCCACGGGTTG+AGG - chr1_3:29766354-29766373 Msa0113740:CDS 55.0%
TCCGTTCCATGCTCTAGCAC+AGG - chr1_3:29766795-29766814 Msa0113740:CDS 55.0%
GCCTGTGCTAGAGCATGGAA+CGG + chr1_3:29766799-29766818 None:intergenic 55.0%
CTCTCCCTGATCCCATATGC+TGG + chr1_3:29766841-29766860 None:intergenic 55.0%
CAGCATATGGGATCAGGGAG+AGG - chr1_3:29766839-29766858 Msa0113740:intron 55.0%
!! GGGCAGCCAAAGCTTTGTTG+GGG + chr1_3:29766885-29766904 None:intergenic 55.0%
! CTGGGCAGCCAAAGCTTTGT+TGG + chr1_3:29766887-29766906 None:intergenic 55.0%
! CAAAGCTTTGGCTGCCCAGT+TGG - chr1_3:29766888-29766907 Msa0113740:intron 55.0%
! CGGATCAAGTTGCGCCAACT+GGG + chr1_3:29766905-29766924 None:intergenic 55.0%
! ACGGATCAAGTTGCGCCAAC+TGG + chr1_3:29766906-29766925 None:intergenic 55.0%
! CTTCGGTTCGCCTCACCCTA+AGG - chr1_3:29761476-29761495 Msa0113740:three_prime_UTR 60.0%
GCTGCTAGCATCAGCCTGTG+AGG + chr1_3:29761834-29761853 None:intergenic 60.0%
CGGCTATCTCCGTCTGCATC+TGG + chr1_3:29761917-29761936 None:intergenic 60.0%
! GCAAAGGTGCGAGTGGTGTG+CGG - chr1_3:29762770-29762789 Msa0113740:intron 60.0%
GCAGCACTCTTCTCTTGCGC+CGG - chr1_3:29762816-29762835 Msa0113740:intron 60.0%
! TTCTCTTGCGCCGGTGGTGA+AGG - chr1_3:29762825-29762844 Msa0113740:intron 60.0%
! GAGGCCCCTGAAAGCATGAC+AGG + chr1_3:29764688-29764707 None:intergenic 60.0%
GGGTTTCGTCCAGTGGGCAA+TGG + chr1_3:29764826-29764845 None:intergenic 60.0%
GGCAGTAGGGTTTCGTCCAG+TGG + chr1_3:29764833-29764852 None:intergenic 60.0%
AGCACAGAGGTGGGGCAGTA+GGG + chr1_3:29764846-29764865 None:intergenic 60.0%
CCTCTCCCCTGCAAACGAGT+TGG + chr1_3:29765500-29765519 None:intergenic 60.0%
CCAACTCGTTTGCAGGGGAG+AGG - chr1_3:29765497-29765516 Msa0113740:intron 60.0%
CGTTTGCAGGGGAGAGGGAA+TGG - chr1_3:29765503-29765522 Msa0113740:intron 60.0%
GCCAGGCATTATGCCACAGC+TGG - chr1_3:29766190-29766209 Msa0113740:intron 60.0%
CCCAGCTGTGGCATAATGCC+TGG + chr1_3:29766194-29766213 None:intergenic 60.0%
! GAGCGGTGCAAAGGTGCGAG+TGG - chr1_3:29762763-29762782 Msa0113740:intron 65.0%
GCACTCTTCTCTTGCGCCGG+TGG - chr1_3:29762819-29762838 Msa0113740:intron 65.0%
CAGCACAGAGGTGGGGCAGT+AGG + chr1_3:29764847-29764866 None:intergenic 65.0%
GCAAGGCAGTCCTCAACCCG+TGG + chr1_3:29766367-29766386 None:intergenic 65.0%
GAGTGGCAGGCGCAGCAACC+CGG - chr1_3:29762891-29762910 Msa0113740:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 29761338 29767153 29761338 ID=Msa0113740;Name=Msa0113740
chr1_3 mRNA 29761338 29767153 29761338 ID=Msa0113740-mRNA-1;Parent=Msa0113740;Name=Msa0113740-mRNA-1;_AED=0.11;_eAED=0.12;_QI=119|0.25|0.4|1|1|1|5|193|705
chr1_3 exon 29761338 29762775 29761338 ID=Msa0113740-mRNA-1:exon:9894;Parent=Msa0113740-mRNA-1
chr1_3 exon 29763381 29763465 29763381 ID=Msa0113740-mRNA-1:exon:9893;Parent=Msa0113740-mRNA-1
chr1_3 exon 29763563 29763790 29763563 ID=Msa0113740-mRNA-1:exon:9892;Parent=Msa0113740-mRNA-1
chr1_3 exon 29766327 29766845 29766327 ID=Msa0113740-mRNA-1:exon:9891;Parent=Msa0113740-mRNA-1
chr1_3 exon 29766994 29767153 29766994 ID=Msa0113740-mRNA-1:exon:9890;Parent=Msa0113740-mRNA-1
chr1_3 five_prime_UTR 29767035 29767153 29767035 ID=Msa0113740-mRNA-1:five_prime_utr;Parent=Msa0113740-mRNA-1
chr1_3 CDS 29766994 29767034 29766994 ID=Msa0113740-mRNA-1:cds;Parent=Msa0113740-mRNA-1
chr1_3 CDS 29766327 29766845 29766327 ID=Msa0113740-mRNA-1:cds;Parent=Msa0113740-mRNA-1
chr1_3 CDS 29763563 29763790 29763563 ID=Msa0113740-mRNA-1:cds;Parent=Msa0113740-mRNA-1
chr1_3 CDS 29763381 29763465 29763381 ID=Msa0113740-mRNA-1:cds;Parent=Msa0113740-mRNA-1
chr1_3 CDS 29761531 29762775 29761531 ID=Msa0113740-mRNA-1:cds;Parent=Msa0113740-mRNA-1
chr1_3 three_prime_UTR 29761338 29761530 29761338 ID=Msa0113740-mRNA-1:three_prime_utr;Parent=Msa0113740-mRNA-1
Gene Sequence

>Msa0113740

ATGTGGGCTCTTCGCAGAACTTCGGTTCGCCTCACCCTAAGAAACCAAGGGCTTAATAACAATTCAGGAATTTCTCGTGCCGCTTCTGTCAAATTAATTCCAAACACTTCAGAGGAGGCTGTTCCTGTTCCTGATTCTCATCAAATCATACATGCTCGATTTCTGACAACCGACCGCCACATACCTCATGCTTCCCACAGATTTACTCTCACCACCCGTGAACTTTCCTCACAGGCTGATGCTAGCAGCCAAAAAGAGGATGATGCGGATGATCGTGATGACATGGAGATTGAAGATCGATTGACTGAGCCAGATGCAGACGGAGATAGCCGTGACACTGCTGAAATAGACATCAATGAGCTGGAGTTGTCGGATACTGAGACTGATTCATCTGACAAAAAATCACTTTCTACAAGGAGACGTTCAGAACTATTCAAGGCGATTGTAAGTGTTTCAGGTTTGTCAGTTGATACTGCTCTCGACAAGTGGGTTGAAAAAGGTAAAGAATTAAGCAGGCAAGAGATTGGGTTGGCATTGAATAGTCTTCGAAGGCGTAAAATGGGCCTCCCTGCATTATACAAAGCATCATGTTGTGTTTTGATTGAGTGGTCATTGGAGGTTGGTTGCCAAACCCTAATATGGGGAACAAAAGCTCCACTTTACTCTTCCTCTTCCTATTGTGCCATTGCCCACTGGACGAAACCCTACTGCCCCACCTCTGTGCTGAACTTTCAGCCAAACTTCTTTTCATCATCCCACTTGTTTACTGGTGATTTTCCAGAGCCCCATTCCAAAAAAACTCATTCTCTGCTCCCACTCTCTCTCTCGTCTAACTTATGCATGTCTTTGTTTCTTTTCTTTTCATCTTTTGCTGCCTTGGATTGGCTAGAGTCAAACAAAAAGCTTGAATTTACTGAGAAAGAGTATGCTTCTAAACTTGATTTGATTGCCAAATTGCGTGGCCTACCAAAGGCAGAAAAATACCTCGAGCATGTTCCAAATTCTTTCAGAGGAGAATTATTATACAGAACATTACTAGCTAACTGTGCTAGTCTGGAAAATTTGAGGAAAACGGAGGAAACATTCAACAAAATGAGGGAGTTAGGTTTTCCTGTTACAGCATTTGCTTGCAATCAGTTGCTTCTCATTTATAAGAAGATTGACAAGAAGAAAATAGCTGACGTGTTACTTATGATGGAAAAGGAGAATGTCAAACCTTCTTCTTATACTTACAAAATTTTAATAGACGTGAAGGGAATGTCTAATGATATTGATGGGATGTCTCAAATTGTTGAGACAATGAAGGCAGAAGGTTGTGAACTGGACCATCTAACACGGGCATCTTTGGCCAGGCATTATGCCACAGCTGGGCTTACCGAAAAAACTGAAGCTGTATTGAAGGAGATTGAAGGTGAAAACTTGAAAGAGAATATGTGGGTATGCCCAACTTTGCTTCGCCTTTATGCAATTCTGGGTAGGGCTGATGAAGTGGAGAGAATTTGGAAGGTTTGTGAGTCAAAGCCACGGGTTGAGGACTGCCTTGCTGCAATTGAAGCTTGGGGAAGATTGAAGAAAATTGAAGAAGCAGAGGCAGTTTTTGAGATGATGTCAAATAAATGGAAACTTACGGCCAGGAATTACGAAGCACTCCTGAAAATTTATATAAGGCATAAGATGCTAAACAAGGGTAAGGATCTTATTAAGACAATGGGAGATAGTAGATGCACAATAGGTCCAACAACCTGGGATGCACTTGTGTCTCTTTATGTTCAAGCAGGGGAAGTCGAAAAGGCAGACACTGTTTTGCAGAAGGCACTACAGCAAAATAAGATGAAGCCAATGTTTACTACTTATATGACTATTATGGAGCAGTATGCAAAGAGGGGCGACGTCCATAACGCAGAGAAGATTTTCTATAGATTGAGACAAGCTAATTATATTTCTAGAATATCTCCGTTCCATGCTCTAGCACAGGCTTATGAAAACGCCAAACTACCAGCATATGGGATCAGGGAGAGGATGAAAGCTGATAACCTATTCCCCAACAAAGCTTTGGCTGCCCAGTTGGCGCAACTTGATCCGTTTAGGAAAACTCCAGTTTCTGATTTGCTTGATTGA
Protein sequence

>Msa0113740

MWALRRTSVRLTLRNQGLNNNSGISRAASVKLIPNTSEEAVPVPDSHQIIHARFLTTDRHIPHASHRFTLTTRELSSQADASSQKEDDADDRDDMEIEDRLTEPDADGDSRDTAEIDINELELSDTETDSSDKKSLSTRRRSELFKAIVSVSGLSVDTALDKWVEKGKELSRQEIGLALNSLRRRKMGLPALYKASCCVLIEWSLEVGCQTLIWGTKAPLYSSSSYCAIAHWTKPYCPTSVLNFQPNFFSSSHLFTGDFPEPHSKKTHSLLPLSLSSNLCMSLFLFFSSFAALDWLESNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGMSNDIDGMSQIVETMKAEGCELDHLTRASLARHYATAGLTEKTEAVLKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNYEALLKIYIRHKMLNKGKDLIKTMGDSRCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNKMKPMFTTYMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAYENAKLPAYGIRERMKADNLFPNKALAAQLAQLDPFRKTPVSDLLD*