Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113780 | KEH40903.1 | 93.980 | 598 | 19 | 2 | 1 | 587 | 1 | 592 | 0.0 | 1134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113780 | sp|F4I735|PDS5B_ARATH | 46.755 | 601 | 277 | 6 | 1 | 568 | 1 | 591 | 3.92e-177 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113780 | A0A072VH41 | 93.980 | 598 | 19 | 2 | 1 | 587 | 1 | 592 | 0.0 | 1134 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0113780 | Msa1192580 | 0.802438 | 5.610523e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113780 | MtrunA17_Chr1g0164141 | 93.980 | 598 | 19 | 2 | 1 | 587 | 1 | 592 | 0.0 | 1134 |
| Msa0113780 | MtrunA17_Chr4g0076411 | 37.285 | 582 | 345 | 9 | 6 | 584 | 14 | 578 | 1.01e-114 | 374 |
| Msa0113780 | MtrunA17_Chr2g0290621 | 38.290 | 538 | 313 | 8 | 50 | 585 | 50 | 570 | 3.18e-107 | 353 |
| Msa0113780 | MtrunA17_Chr1g0149971 | 37.427 | 171 | 107 | 0 | 50 | 220 | 53 | 223 | 6.17e-32 | 131 |
| Msa0113780 | MtrunA17_Chr3g0137011 | 36.471 | 170 | 108 | 0 | 51 | 220 | 54 | 223 | 2.10e-30 | 127 |
| Msa0113780 | MtrunA17_Chr4g0001301 | 36.943 | 157 | 99 | 0 | 64 | 220 | 70 | 226 | 1.09e-28 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113780 | AT1G77600.1 | 46.755 | 601 | 277 | 6 | 1 | 568 | 1 | 591 | 3.95e-178 | 541 |
| Msa0113780 | AT1G77600.2 | 46.755 | 601 | 277 | 6 | 1 | 568 | 1 | 591 | 3.98e-178 | 541 |
| Msa0113780 | AT1G77600.3 | 46.755 | 601 | 277 | 6 | 1 | 568 | 1 | 591 | 4.44e-178 | 541 |
| Msa0113780 | AT5G47690.1 | 39.700 | 534 | 308 | 6 | 51 | 584 | 51 | 570 | 3.53e-114 | 373 |
| Msa0113780 | AT5G47690.3 | 39.700 | 534 | 308 | 6 | 51 | 584 | 51 | 570 | 3.58e-114 | 373 |
| Msa0113780 | AT5G47690.2 | 39.700 | 534 | 308 | 6 | 51 | 584 | 51 | 570 | 3.70e-114 | 373 |
| Msa0113780 | AT5G47690.4 | 38.398 | 487 | 286 | 6 | 98 | 584 | 1 | 473 | 1.02e-95 | 320 |
| Msa0113780 | AT4G31880.1 | 39.535 | 172 | 103 | 1 | 49 | 220 | 52 | 222 | 8.08e-37 | 147 |
| Msa0113780 | AT4G31880.2 | 39.535 | 172 | 103 | 1 | 49 | 220 | 52 | 222 | 8.21e-37 | 147 |
| Msa0113780 | AT1G80810.5 | 39.655 | 174 | 105 | 0 | 49 | 222 | 54 | 227 | 2.83e-33 | 135 |
| Msa0113780 | AT1G80810.4 | 39.884 | 173 | 104 | 0 | 49 | 221 | 2 | 174 | 4.65e-33 | 135 |
| Msa0113780 | AT1G80810.2 | 39.884 | 173 | 104 | 0 | 49 | 221 | 2 | 174 | 4.65e-33 | 135 |
| Msa0113780 | AT1G15940.1 | 39.645 | 169 | 102 | 0 | 51 | 219 | 58 | 226 | 4.95e-33 | 135 |
| Msa0113780 | AT1G80810.1 | 39.884 | 173 | 104 | 0 | 49 | 221 | 2 | 174 | 5.08e-33 | 135 |
| Msa0113780 | AT1G80810.3 | 39.884 | 173 | 104 | 0 | 49 | 221 | 54 | 226 | 5.96e-33 | 135 |
Find 98 sgRNAs with CRISPR-Local
Find 584 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGCACTGAATACTATTT+TGG | 0.215599 | 1_3:-29835051 | Msa0113780:CDS |
| TATTGGTTTGTTTGCGGATC+TGG | 0.235562 | 1_3:-29837374 | Msa0113780:CDS |
| GTCTATGTGGCAAATCCTTT+TGG | 0.236592 | 1_3:-29835848 | Msa0113780:CDS |
| TGAAAGACTTAGGGATAAAA+AGG | 0.284745 | 1_3:-29835501 | Msa0113780:CDS |
| GAATGAGATGATAAACTATT+TGG | 0.286082 | 1_3:-29834939 | Msa0113780:CDS |
| GGCAATACGGAAGAAATTAA+AGG | 0.286256 | 1_3:-29834918 | Msa0113780:intron |
| GATGTATTTAAACTCATTAT+TGG | 0.292432 | 1_3:-29837391 | Msa0113780:CDS |
| AGCTGAACACCCTAGTTTGC+AGG | 0.303496 | 1_3:-29836327 | Msa0113780:CDS |
| ACAAGTTATTATCTTTGATT+TGG | 0.303962 | 1_3:+29833571 | None:intergenic |
| CTCAAACTCATCTCCGATAT+CGG | 0.315949 | 1_3:-29838912 | Msa0113780:CDS |
| TTCCTCGCTTTCATTCAAAA+TGG | 0.330449 | 1_3:+29836795 | None:intergenic |
| ACCTGAGCAGCTTCTGTTGA+AGG | 0.332104 | 1_3:-29835635 | Msa0113780:intron |
| TTACAAACTACATACTTTGA+TGG | 0.335176 | 1_3:+29833497 | None:intergenic |
| CAGATCCCAGAGCATGGAAT+TGG | 0.335494 | 1_3:-29835168 | Msa0113780:CDS |
| GTTTGTTCCCTTGAAACTAA+TGG | 0.338281 | 1_3:-29835534 | Msa0113780:CDS |
| TCGGTTAAAAGCTGTTATTT+TGG | 0.349900 | 1_3:-29836002 | Msa0113780:CDS |
| GAAGAACCAACTTTCACAAT+TGG | 0.354302 | 1_3:-29833525 | Msa0113780:CDS |
| CGATATTTCTTCAATTAAGC+TGG | 0.368701 | 1_3:+29836186 | None:intergenic |
| GACAGAGACGGCGTGGGCTG+CGG | 0.369037 | 1_3:-29836283 | Msa0113780:CDS |
| ATAAGGATTGCAAGGAGTTC+AGG | 0.374450 | 1_3:-29835269 | Msa0113780:intron |
| AAACTTGAAAGATAATTTCA+TGG | 0.380268 | 1_3:+29836245 | None:intergenic |
| TTTGATGCTTTGCTATGATA+AGG | 0.381462 | 1_3:-29835286 | Msa0113780:CDS |
| CAGCTTAATTGAAGAAATAT+CGG | 0.383625 | 1_3:-29836185 | Msa0113780:intron |
| ATCCAATTTGTAGGCTGATC+AGG | 0.387190 | 1_3:-29836032 | Msa0113780:intron |
| GTGAGTGTGAGGGTTTGTTT+TGG | 0.388003 | 1_3:+29838999 | None:intergenic |
| CACTGAATTATTTCGAATCA+AGG | 0.401173 | 1_3:-29837575 | Msa0113780:CDS |
| CAAGAACCAATTCCATGCTC+TGG | 0.401194 | 1_3:+29835162 | None:intergenic |
| CTGATAGATGCTGTGGTTTG+TGG | 0.404803 | 1_3:-29837652 | Msa0113780:CDS |
| GTGGCGGTCTTCTTCAGCAT+GGG | 0.414521 | 1_3:-29837633 | Msa0113780:CDS |
| TTGTCTTCAAAAGGAGGTTC+AGG | 0.420758 | 1_3:+29837550 | None:intergenic |
| CTGAAGTCTCTGAAAGACTT+AGG | 0.422787 | 1_3:-29835511 | Msa0113780:CDS |
| TTTCAGTCCTCTTCATGAAA+AGG | 0.425682 | 1_3:-29835069 | Msa0113780:CDS |
| GACTTCAGCCATTAGTTTCA+AGG | 0.429451 | 1_3:+29835526 | None:intergenic |
| AGGCTGATCAGGTTGATATT+CGG | 0.431025 | 1_3:-29836021 | Msa0113780:CDS |
| AGCGAGTTGAGTTCCGATAT+CGG | 0.431457 | 1_3:+29838899 | None:intergenic |
| AAAGTGTTGCTTATTAATGC+TGG | 0.439806 | 1_3:-29837290 | Msa0113780:CDS |
| CTCAAATGCTTGTCTTCAAA+AGG | 0.444732 | 1_3:+29837541 | None:intergenic |
| TCTTTGGCTGTTCGCGGCTG+AGG | 0.447594 | 1_3:+29837715 | None:intergenic |
| TCTTCTTCAGCATGGGGATA+AGG | 0.449335 | 1_3:-29837626 | Msa0113780:CDS |
| ACAGAGACGGCGTGGGCTGC+GGG | 0.449590 | 1_3:-29836282 | Msa0113780:CDS |
| GGTCATCAAAGTCAAATAAT+CGG | 0.453439 | 1_3:+29835612 | None:intergenic |
| ACTCATTATTGGTTTGTTTG+CGG | 0.461013 | 1_3:-29837380 | Msa0113780:CDS |
| ATTTGCCACATAGACAGCTT+TGG | 0.464896 | 1_3:+29835856 | None:intergenic |
| TCAGGTGTCTGTTAGGAAGA+AGG | 0.466388 | 1_3:-29835409 | Msa0113780:intron |
| CAAAGCATCAAAACTTTACA+TGG | 0.467743 | 1_3:+29835297 | None:intergenic |
| TGTGGCGGTCTTCTTCAGCA+TGG | 0.469195 | 1_3:-29837634 | Msa0113780:CDS |
| GTTTGTCCAATTGTGAAAGT+TGG | 0.481602 | 1_3:+29833519 | None:intergenic |
| TTTACTTCTTTGGCTGTTCG+CGG | 0.482036 | 1_3:+29837709 | None:intergenic |
| TTGACGATGAAGTCTTTGTT+CGG | 0.485867 | 1_3:+29838864 | None:intergenic |
| TGAAGTCTCTGAAAGACTTA+GGG | 0.486997 | 1_3:-29835510 | Msa0113780:CDS |
| GAAGGCCTCACAGAAGTTGA+TGG | 0.491941 | 1_3:-29835391 | Msa0113780:CDS |
| TGATTTGGTTTAACTTGTGA+AGG | 0.492234 | 1_3:+29833586 | None:intergenic |
| GTTTCAAGGGAACAAACATC+AGG | 0.501858 | 1_3:+29835540 | None:intergenic |
| TCCCGAGCATCTTTCTGTTG+CGG | 0.509417 | 1_3:-29835126 | Msa0113780:CDS |
| GATATTTCTTCAATTAAGCT+GGG | 0.517070 | 1_3:+29836187 | None:intergenic |
| TTGTGTTGAGTGTGAGTGTG+AGG | 0.520379 | 1_3:+29838988 | None:intergenic |
| TGATAAACTATTTGGCAATA+CGG | 0.526283 | 1_3:-29834931 | Msa0113780:CDS |
| TCCGCAACAGAAAGATGCTC+GGG | 0.527111 | 1_3:+29835125 | None:intergenic |
| GAAATAATTCAGTGACGCAA+AGG | 0.528935 | 1_3:+29837584 | None:intergenic |
| CAACCGCCTGCATCCTCACT+CGG | 0.532732 | 1_3:+29835591 | None:intergenic |
| ATGACTGCAAGAAGCATATG+AGG | 0.539368 | 1_3:+29836211 | None:intergenic |
| TTCCGCAACAGAAAGATGCT+CGG | 0.542585 | 1_3:+29835124 | None:intergenic |
| TGTGTTGAGTGTGAGTGTGA+GGG | 0.542738 | 1_3:+29838989 | None:intergenic |
| ACTTCAGCCATTAGTTTCAA+GGG | 0.543546 | 1_3:+29835527 | None:intergenic |
| AAATAATTCAGTGACGCAAA+GGG | 0.548105 | 1_3:+29837585 | None:intergenic |
| AAGAACCAATTCCATGCTCT+GGG | 0.548415 | 1_3:+29835163 | None:intergenic |
| TACTGTAAGAAATGTTGTGA+AGG | 0.558571 | 1_3:-29835354 | Msa0113780:CDS |
| AGTTGATAAGAAGCACAAGT+TGG | 0.564113 | 1_3:+29836388 | None:intergenic |
| CGTTGAACATCTCGAGAACA+AGG | 0.565812 | 1_3:+29837251 | None:intergenic |
| TGATGACCGAGTGAGGATGC+AGG | 0.565959 | 1_3:-29835597 | Msa0113780:CDS |
| TTGCGGAAAGGACAAAGCAC+TGG | 0.567584 | 1_3:-29835109 | Msa0113780:CDS |
| TTGCTATGATAAGGATTGCA+AGG | 0.568868 | 1_3:-29835277 | Msa0113780:CDS |
| TCCATGGTGGAATCGAGAGA+AGG | 0.569208 | 1_3:+29838945 | None:intergenic |
| AATTAGTACTTGTGCTCATG+AGG | 0.572015 | 1_3:-29836353 | Msa0113780:CDS |
| GTCTGAACTGCAAATATCAC+AGG | 0.573815 | 1_3:+29835562 | None:intergenic |
| AGCATCTTTCTGTTGCGGAA+AGG | 0.576447 | 1_3:-29835121 | Msa0113780:CDS |
| TGGCGGTCTTCTTCAGCATG+GGG | 0.578280 | 1_3:-29837632 | Msa0113780:CDS |
| TCTTGTATTTATGACAGAGA+CGG | 0.583969 | 1_3:-29836295 | Msa0113780:CDS |
| AAATGCTTGTCTTCAAAAGG+AGG | 0.585800 | 1_3:+29837544 | None:intergenic |
| GAAATGTTGTGAAGGAAGCA+TGG | 0.592659 | 1_3:-29835346 | Msa0113780:CDS |
| GAATTTCAGATCCCAGAGCA+TGG | 0.595894 | 1_3:-29835174 | Msa0113780:intron |
| TATTTATGACAGAGACGGCG+TGG | 0.610217 | 1_3:-29836290 | Msa0113780:CDS |
| GGTTATCATAATAGAAGACA+TGG | 0.614977 | 1_3:+29836816 | None:intergenic |
| ACCTTCTCTCGATTCCACCA+TGG | 0.626057 | 1_3:-29838946 | Msa0113780:exon |
| GGTTAAAGTATTGGATACTG+TGG | 0.641308 | 1_3:-29837320 | Msa0113780:CDS |
| ATTTATGACAGAGACGGCGT+GGG | 0.642216 | 1_3:-29836289 | Msa0113780:CDS |
| GAAGCCACTGATAGATGCTG+TGG | 0.646591 | 1_3:-29837659 | Msa0113780:CDS |
| ATAGATGCTGTGGTTTGTGG+CGG | 0.653066 | 1_3:-29837649 | Msa0113780:CDS |
| CATGAAACTTCTGTGCAACA+TGG | 0.656236 | 1_3:+29835951 | None:intergenic |
| TTGACTTTGATGACCGAGTG+AGG | 0.656661 | 1_3:-29835604 | Msa0113780:CDS |
| TTTGAGCGAGGTGAGATCCA+TGG | 0.668375 | 1_3:+29838929 | None:intergenic |
| ATGTGCCAAAGCTGTCTATG+TGG | 0.669466 | 1_3:-29835861 | Msa0113780:CDS |
| GTGTTGCTTATTAATGCTGG+AGG | 0.670131 | 1_3:-29837287 | Msa0113780:CDS |
| ATCGGAGATGAGTTTGAGCG+AGG | 0.686621 | 1_3:+29838917 | None:intergenic |
| TATTTCCATCAACTTCTGTG+AGG | 0.695527 | 1_3:+29835386 | None:intergenic |
| CAAACCACAGCATCTATCAG+TGG | 0.707630 | 1_3:+29837655 | None:intergenic |
| GAGCGAGGTGAGATCCATGG+TGG | 0.731455 | 1_3:+29838932 | None:intergenic |
| TGACCGAGTGAGGATGCAGG+CGG | 0.772188 | 1_3:-29835594 | Msa0113780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTCATTATTTTCAAAA+AGG | - | chr1_3:29835184-29835203 | Msa0113780:intron | 10.0% |
| !!! | AAATTCATTATTTTCAAAAA+GGG | - | chr1_3:29835185-29835204 | Msa0113780:intron | 10.0% |
| !!! | TTATTTGTTACTATTTTTTT+TGG | - | chr1_3:29838703-29838722 | Msa0113780:intron | 10.0% |
| !!! | AAAATTCATTATTTTCAAAA+AGG | - | chr1_3:29835184-29835203 | Msa0113780:intron | 10.0% |
| !!! | AAATTCATTATTTTCAAAAA+GGG | - | chr1_3:29835185-29835204 | Msa0113780:intron | 10.0% |
| !!! | TTATTTGTTACTATTTTTTT+TGG | - | chr1_3:29838703-29838722 | Msa0113780:intron | 10.0% |
| !! | TAATTTACTTAAATTTCTAC+CGG | + | chr1_3:29834221-29834240 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAACTGCAAAA+TGG | + | chr1_3:29834466-29834485 | None:intergenic | 15.0% |
| !! | AAAGAACAAATATGTTTATA+CGG | + | chr1_3:29835107-29835126 | None:intergenic | 15.0% |
| !! | TTAAAATTAACAATCATTAC+TGG | + | chr1_3:29835617-29835636 | None:intergenic | 15.0% |
| !!! | ATTTTAAAACTAGACTAAAA+GGG | + | chr1_3:29836375-29836394 | None:intergenic | 15.0% |
| !!! | AATTTTAAAACTAGACTAAA+AGG | + | chr1_3:29836376-29836395 | None:intergenic | 15.0% |
| !! | GATTGTAGATATAATAAAAA+CGG | + | chr1_3:29836477-29836496 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTCTTATAACAAA+GGG | - | chr1_3:29837647-29837666 | Msa0113780:CDS | 15.0% |
| !!! | AATACTCAATAAATTAGTTT+GGG | + | chr1_3:29837731-29837750 | None:intergenic | 15.0% |
| !! | AAATACTCAATAAATTAGTT+TGG | + | chr1_3:29837732-29837751 | None:intergenic | 15.0% |
| !!! | TGATTTAATTTAATAAGTAC+AGG | - | chr1_3:29838630-29838649 | Msa0113780:intron | 15.0% |
| !! | AAATGTTTAATATTCAATGA+AGG | + | chr1_3:29838683-29838702 | None:intergenic | 15.0% |
| !! | TAAATCTCTTGAAAAATTAT+TGG | - | chr1_3:29838979-29838998 | Msa0113780:five_prime_UTR | 15.0% |
| !! | TAATTTACTTAAATTTCTAC+CGG | + | chr1_3:29834221-29834240 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAACTGCAAAA+TGG | + | chr1_3:29834466-29834485 | None:intergenic | 15.0% |
| !! | AAAGAACAAATATGTTTATA+CGG | + | chr1_3:29835107-29835126 | None:intergenic | 15.0% |
| !! | TTAAAATTAACAATCATTAC+TGG | + | chr1_3:29835617-29835636 | None:intergenic | 15.0% |
| !!! | ATTTTAAAACTAGACTAAAA+GGG | + | chr1_3:29836375-29836394 | None:intergenic | 15.0% |
| !!! | AATTTTAAAACTAGACTAAA+AGG | + | chr1_3:29836376-29836395 | None:intergenic | 15.0% |
| !! | GATTGTAGATATAATAAAAA+CGG | + | chr1_3:29836477-29836496 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTCTTATAACAAA+GGG | - | chr1_3:29837647-29837666 | Msa0113780:CDS | 15.0% |
| !!! | AATACTCAATAAATTAGTTT+GGG | + | chr1_3:29837731-29837750 | None:intergenic | 15.0% |
| !! | AAATACTCAATAAATTAGTT+TGG | + | chr1_3:29837732-29837751 | None:intergenic | 15.0% |
| !!! | TGATTTAATTTAATAAGTAC+AGG | - | chr1_3:29838630-29838649 | Msa0113780:intron | 15.0% |
| !! | AAATGTTTAATATTCAATGA+AGG | + | chr1_3:29838683-29838702 | None:intergenic | 15.0% |
| !! | TAAATCTCTTGAAAAATTAT+TGG | - | chr1_3:29838979-29838998 | Msa0113780:five_prime_UTR | 15.0% |
| !!! | TTGTTTTGGTTTGTTTTATA+GGG | + | chr1_3:29833516-29833535 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGGTTTGTTTTAT+AGG | + | chr1_3:29833517-29833536 | None:intergenic | 20.0% |
| !!! | TGATTTTATGTGTTTGAATT+TGG | - | chr1_3:29833901-29833920 | Msa0113780:intron | 20.0% |
| !! | GAAATAAAATGTTTATGTGT+CGG | - | chr1_3:29834252-29834271 | Msa0113780:intron | 20.0% |
| !!! | TCATTTTCTTAAATTACTAC+CGG | + | chr1_3:29834281-29834300 | None:intergenic | 20.0% |
| !! | TATTAATGGTATTAGAGAAA+AGG | - | chr1_3:29834389-29834408 | Msa0113780:intron | 20.0% |
| !! | ATTAATGGTATTAGAGAAAA+GGG | - | chr1_3:29834390-29834409 | Msa0113780:intron | 20.0% |
| !!! | TTGCAGTTATTTTTAAATTG+TGG | - | chr1_3:29834468-29834487 | Msa0113780:intron | 20.0% |
| !! | AACAGTGAATAAAAGTTTAA+TGG | + | chr1_3:29834735-29834754 | None:intergenic | 20.0% |
| !! | AAAAAAGGTGAGAAAAAAAA+TGG | + | chr1_3:29835083-29835102 | None:intergenic | 20.0% |
| !! | ATATGTTTATACGGAAAAAA+AGG | + | chr1_3:29835098-29835117 | None:intergenic | 20.0% |
| !! | GATGTATTTAAACTCATTAT+TGG | - | chr1_3:29835135-29835154 | Msa0113780:CDS | 20.0% |
| !!! | AAATAATGAATTTTCAGTGT+CGG | + | chr1_3:29835178-29835197 | None:intergenic | 20.0% |
| !!! | TTTTTTACACTATAGTGAAT+TGG | - | chr1_3:29835500-29835519 | Msa0113780:CDS | 20.0% |
| !! | ATCACTTATGATATTGTTTA+GGG | + | chr1_3:29835544-29835563 | None:intergenic | 20.0% |
| !! | TAAACAATATCATAAGTGAT+GGG | - | chr1_3:29835544-29835563 | Msa0113780:CDS | 20.0% |
| !!! | CTAATTTTTTGTAGTTACTA+AGG | + | chr1_3:29835593-29835612 | None:intergenic | 20.0% |
| !!! | AATTTTAATGCAAGAGTTAA+TGG | - | chr1_3:29835629-29835648 | Msa0113780:intron | 20.0% |
| !! | AAACTTGAAAGATAATTTCA+TGG | + | chr1_3:29836284-29836303 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTATACAAGCT+AGG | - | chr1_3:29836387-29836406 | Msa0113780:CDS | 20.0% |
| !! | AGTTGAAAATGAAATTATGA+GGG | + | chr1_3:29836805-29836824 | None:intergenic | 20.0% |
| !!! | TCATAATTTCATTTTCAACT+GGG | - | chr1_3:29836805-29836824 | Msa0113780:CDS | 20.0% |
| !!! | TACAAATTCTTTTATCTTTC+AGG | - | chr1_3:29837559-29837578 | Msa0113780:CDS | 20.0% |
| !!! | GAGTTTTTTTCTTATAACAA+AGG | - | chr1_3:29837646-29837665 | Msa0113780:CDS | 20.0% |
| !! | CATTATAGTATACATTAATG+AGG | - | chr1_3:29838085-29838104 | Msa0113780:intron | 20.0% |
| !!! | AATTAAGATTTTAACTACCA+TGG | + | chr1_3:29838265-29838284 | None:intergenic | 20.0% |
| !! | AGTATAATTGCAAAATCATA+AGG | + | chr1_3:29838300-29838319 | None:intergenic | 20.0% |
| !!! | GTATATGCAAAATTTTGTTT+TGG | - | chr1_3:29838338-29838357 | Msa0113780:intron | 20.0% |
| !! | ACAAGTTATTATCTTTGATT+TGG | + | chr1_3:29838958-29838977 | None:intergenic | 20.0% |
| !!! | TTGTTTTGGTTTGTTTTATA+GGG | + | chr1_3:29833516-29833535 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGGTTTGTTTTAT+AGG | + | chr1_3:29833517-29833536 | None:intergenic | 20.0% |
| !!! | TGATTTTATGTGTTTGAATT+TGG | - | chr1_3:29833901-29833920 | Msa0113780:intron | 20.0% |
| !! | GAAATAAAATGTTTATGTGT+CGG | - | chr1_3:29834252-29834271 | Msa0113780:intron | 20.0% |
| !!! | TCATTTTCTTAAATTACTAC+CGG | + | chr1_3:29834281-29834300 | None:intergenic | 20.0% |
| !! | TATTAATGGTATTAGAGAAA+AGG | - | chr1_3:29834389-29834408 | Msa0113780:intron | 20.0% |
| !! | ATTAATGGTATTAGAGAAAA+GGG | - | chr1_3:29834390-29834409 | Msa0113780:intron | 20.0% |
| !!! | TTGCAGTTATTTTTAAATTG+TGG | - | chr1_3:29834468-29834487 | Msa0113780:intron | 20.0% |
| !! | AACAGTGAATAAAAGTTTAA+TGG | + | chr1_3:29834735-29834754 | None:intergenic | 20.0% |
| !! | AAAAAAGGTGAGAAAAAAAA+TGG | + | chr1_3:29835083-29835102 | None:intergenic | 20.0% |
| !! | ATATGTTTATACGGAAAAAA+AGG | + | chr1_3:29835098-29835117 | None:intergenic | 20.0% |
| !! | GATGTATTTAAACTCATTAT+TGG | - | chr1_3:29835135-29835154 | Msa0113780:CDS | 20.0% |
| !!! | AAATAATGAATTTTCAGTGT+CGG | + | chr1_3:29835178-29835197 | None:intergenic | 20.0% |
| !!! | TTTTTTACACTATAGTGAAT+TGG | - | chr1_3:29835500-29835519 | Msa0113780:CDS | 20.0% |
| !! | ATCACTTATGATATTGTTTA+GGG | + | chr1_3:29835544-29835563 | None:intergenic | 20.0% |
| !! | TAAACAATATCATAAGTGAT+GGG | - | chr1_3:29835544-29835563 | Msa0113780:CDS | 20.0% |
| !!! | CTAATTTTTTGTAGTTACTA+AGG | + | chr1_3:29835593-29835612 | None:intergenic | 20.0% |
| !!! | AATTTTAATGCAAGAGTTAA+TGG | - | chr1_3:29835629-29835648 | Msa0113780:intron | 20.0% |
| !! | AAACTTGAAAGATAATTTCA+TGG | + | chr1_3:29836284-29836303 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTATACAAGCT+AGG | - | chr1_3:29836387-29836406 | Msa0113780:CDS | 20.0% |
| !! | AGTTGAAAATGAAATTATGA+GGG | + | chr1_3:29836805-29836824 | None:intergenic | 20.0% |
| !!! | TCATAATTTCATTTTCAACT+GGG | - | chr1_3:29836805-29836824 | Msa0113780:CDS | 20.0% |
| !!! | TACAAATTCTTTTATCTTTC+AGG | - | chr1_3:29837559-29837578 | Msa0113780:CDS | 20.0% |
| !!! | GAGTTTTTTTCTTATAACAA+AGG | - | chr1_3:29837646-29837665 | Msa0113780:CDS | 20.0% |
| !! | CATTATAGTATACATTAATG+AGG | - | chr1_3:29838085-29838104 | Msa0113780:intron | 20.0% |
| !!! | AATTAAGATTTTAACTACCA+TGG | + | chr1_3:29838265-29838284 | None:intergenic | 20.0% |
| !! | AGTATAATTGCAAAATCATA+AGG | + | chr1_3:29838300-29838319 | None:intergenic | 20.0% |
| !!! | GTATATGCAAAATTTTGTTT+TGG | - | chr1_3:29838338-29838357 | Msa0113780:intron | 20.0% |
| !! | ACAAGTTATTATCTTTGATT+TGG | + | chr1_3:29838958-29838977 | None:intergenic | 20.0% |
| !!! | TGTTTTGGTTTGTTTTATAG+GGG | + | chr1_3:29833515-29833534 | None:intergenic | 25.0% |
| !!! | CACTTTTTGAAAACCTAATT+CGG | - | chr1_3:29833776-29833795 | Msa0113780:intron | 25.0% |
| ! | ATCAAAACAAGAAATGCATT+AGG | + | chr1_3:29833885-29833904 | None:intergenic | 25.0% |
| ! | TTTATGTGTTTGAATTTGGT+TGG | - | chr1_3:29833905-29833924 | Msa0113780:intron | 25.0% |
| !! | TGAGTGTTTAACTTAATTTG+TGG | - | chr1_3:29833963-29833982 | Msa0113780:intron | 25.0% |
| ! | AGTGCAATAGAGATTATTAA+TGG | - | chr1_3:29834375-29834394 | Msa0113780:intron | 25.0% |
| ! | TAAAAATAACTGCAAAATGG+TGG | + | chr1_3:29834463-29834482 | None:intergenic | 25.0% |
| !! | CATATTTGTTCTTTGATTTC+AGG | - | chr1_3:29835113-29835132 | Msa0113780:CDS | 25.0% |
| ! | TTCAAAAAGGGTTAAAGTAT+TGG | - | chr1_3:29835197-29835216 | Msa0113780:intron | 25.0% |
| ! | CATCACTTATGATATTGTTT+AGG | + | chr1_3:29835545-29835564 | None:intergenic | 25.0% |
| ! | CTAAACAATATCATAAGTGA+TGG | - | chr1_3:29835543-29835562 | Msa0113780:CDS | 25.0% |
| ! | AAACAATATCATAAGTGATG+GGG | - | chr1_3:29835545-29835564 | Msa0113780:CDS | 25.0% |
| ! | TATTACATAATCATGAGCAA+CGG | + | chr1_3:29836070-29836089 | None:intergenic | 25.0% |
| ! | GATATTTCTTCAATTAAGCT+GGG | + | chr1_3:29836342-29836361 | None:intergenic | 25.0% |
| ! | CAGCTTAATTGAAGAAATAT+CGG | - | chr1_3:29836341-29836360 | Msa0113780:CDS | 25.0% |
| ! | ATATCTACAATCCAATTTGT+AGG | - | chr1_3:29836485-29836504 | Msa0113780:intron | 25.0% |
| !!! | TTAAAAGCTGTTATTTTGGT+GGG | - | chr1_3:29836528-29836547 | Msa0113780:intron | 25.0% |
| ! | CCAAATGATATAACATAAAC+AGG | + | chr1_3:29836761-29836780 | None:intergenic | 25.0% |
| ! | CCTGTTTATGTTATATCATT+TGG | - | chr1_3:29836758-29836777 | Msa0113780:CDS | 25.0% |
| ! | CAGTTGAAAATGAAATTATG+AGG | + | chr1_3:29836806-29836825 | None:intergenic | 25.0% |
| !! | CTCATAATTTCATTTTCAAC+TGG | - | chr1_3:29836804-29836823 | Msa0113780:CDS | 25.0% |
| ! | TTACTAGGATGAAATTATGA+GGG | + | chr1_3:29836855-29836874 | None:intergenic | 25.0% |
| ! | TTTAAATTCAACTAGCAATC+TGG | + | chr1_3:29837297-29837316 | None:intergenic | 25.0% |
| ! | GAATGAGATGATAAACTATT+TGG | - | chr1_3:29837587-29837606 | Msa0113780:CDS | 25.0% |
| ! | TGATAAACTATTTGGCAATA+CGG | - | chr1_3:29837595-29837614 | Msa0113780:CDS | 25.0% |
| ! | GAAATTAAAGGTAAAATGCA+AGG | - | chr1_3:29837620-29837639 | Msa0113780:CDS | 25.0% |
| ! | CATCAACTCTAAATAGAAAA+GGG | + | chr1_3:29837685-29837704 | None:intergenic | 25.0% |
| ! | AGTAAAGTCAATAGGAAAAT+AGG | - | chr1_3:29837772-29837791 | Msa0113780:intron | 25.0% |
| !!! | TTATCCATTTTTTAGTATCC+AGG | + | chr1_3:29837824-29837843 | None:intergenic | 25.0% |
| ! | AAATGGATAAGTATTTGTGT+CGG | - | chr1_3:29837834-29837853 | Msa0113780:intron | 25.0% |
| ! | CATATACTCATAATTGTTGA+AGG | + | chr1_3:29838325-29838344 | None:intergenic | 25.0% |
| !!! | TATGCAAAATTTTGTTTTGG+TGG | - | chr1_3:29838341-29838360 | Msa0113780:intron | 25.0% |
| ! | CAAAGAAAAGTAGATTATAC+AGG | + | chr1_3:29838370-29838389 | None:intergenic | 25.0% |
| ! | TTGAAATGATTCTACCATTA+TGG | - | chr1_3:29838387-29838406 | Msa0113780:intron | 25.0% |
| ! | TTTGTATTTCTTTCTCAGAT+TGG | - | chr1_3:29838728-29838747 | Msa0113780:intron | 25.0% |
| ! | TTGTATTTCTTTCTCAGATT+GGG | - | chr1_3:29838729-29838748 | Msa0113780:intron | 25.0% |
| !! | ATTTGATAGTTTGGAAGTAA+TGG | - | chr1_3:29838809-29838828 | Msa0113780:intron | 25.0% |
| !!! | TGTTTTGGTTTGTTTTATAG+GGG | + | chr1_3:29833515-29833534 | None:intergenic | 25.0% |
| !!! | CACTTTTTGAAAACCTAATT+CGG | - | chr1_3:29833776-29833795 | Msa0113780:intron | 25.0% |
| ! | ATCAAAACAAGAAATGCATT+AGG | + | chr1_3:29833885-29833904 | None:intergenic | 25.0% |
| ! | TTTATGTGTTTGAATTTGGT+TGG | - | chr1_3:29833905-29833924 | Msa0113780:intron | 25.0% |
| !! | TGAGTGTTTAACTTAATTTG+TGG | - | chr1_3:29833963-29833982 | Msa0113780:intron | 25.0% |
| ! | AGTGCAATAGAGATTATTAA+TGG | - | chr1_3:29834375-29834394 | Msa0113780:intron | 25.0% |
| ! | TAAAAATAACTGCAAAATGG+TGG | + | chr1_3:29834463-29834482 | None:intergenic | 25.0% |
| !! | CATATTTGTTCTTTGATTTC+AGG | - | chr1_3:29835113-29835132 | Msa0113780:CDS | 25.0% |
| ! | TTCAAAAAGGGTTAAAGTAT+TGG | - | chr1_3:29835197-29835216 | Msa0113780:intron | 25.0% |
| ! | CATCACTTATGATATTGTTT+AGG | + | chr1_3:29835545-29835564 | None:intergenic | 25.0% |
| ! | CTAAACAATATCATAAGTGA+TGG | - | chr1_3:29835543-29835562 | Msa0113780:CDS | 25.0% |
| ! | AAACAATATCATAAGTGATG+GGG | - | chr1_3:29835545-29835564 | Msa0113780:CDS | 25.0% |
| ! | TATTACATAATCATGAGCAA+CGG | + | chr1_3:29836070-29836089 | None:intergenic | 25.0% |
| ! | GATATTTCTTCAATTAAGCT+GGG | + | chr1_3:29836342-29836361 | None:intergenic | 25.0% |
| ! | CAGCTTAATTGAAGAAATAT+CGG | - | chr1_3:29836341-29836360 | Msa0113780:CDS | 25.0% |
| ! | ATATCTACAATCCAATTTGT+AGG | - | chr1_3:29836485-29836504 | Msa0113780:intron | 25.0% |
| !!! | TTAAAAGCTGTTATTTTGGT+GGG | - | chr1_3:29836528-29836547 | Msa0113780:intron | 25.0% |
| ! | CCAAATGATATAACATAAAC+AGG | + | chr1_3:29836761-29836780 | None:intergenic | 25.0% |
| ! | CCTGTTTATGTTATATCATT+TGG | - | chr1_3:29836758-29836777 | Msa0113780:CDS | 25.0% |
| ! | CAGTTGAAAATGAAATTATG+AGG | + | chr1_3:29836806-29836825 | None:intergenic | 25.0% |
| !! | CTCATAATTTCATTTTCAAC+TGG | - | chr1_3:29836804-29836823 | Msa0113780:CDS | 25.0% |
| ! | TTACTAGGATGAAATTATGA+GGG | + | chr1_3:29836855-29836874 | None:intergenic | 25.0% |
| ! | TTTAAATTCAACTAGCAATC+TGG | + | chr1_3:29837297-29837316 | None:intergenic | 25.0% |
| ! | GAATGAGATGATAAACTATT+TGG | - | chr1_3:29837587-29837606 | Msa0113780:CDS | 25.0% |
| ! | TGATAAACTATTTGGCAATA+CGG | - | chr1_3:29837595-29837614 | Msa0113780:CDS | 25.0% |
| ! | GAAATTAAAGGTAAAATGCA+AGG | - | chr1_3:29837620-29837639 | Msa0113780:CDS | 25.0% |
| ! | CATCAACTCTAAATAGAAAA+GGG | + | chr1_3:29837685-29837704 | None:intergenic | 25.0% |
| ! | AGTAAAGTCAATAGGAAAAT+AGG | - | chr1_3:29837772-29837791 | Msa0113780:intron | 25.0% |
| !!! | TTATCCATTTTTTAGTATCC+AGG | + | chr1_3:29837824-29837843 | None:intergenic | 25.0% |
| ! | AAATGGATAAGTATTTGTGT+CGG | - | chr1_3:29837834-29837853 | Msa0113780:intron | 25.0% |
| ! | CATATACTCATAATTGTTGA+AGG | + | chr1_3:29838325-29838344 | None:intergenic | 25.0% |
| !!! | TATGCAAAATTTTGTTTTGG+TGG | - | chr1_3:29838341-29838360 | Msa0113780:intron | 25.0% |
| ! | CAAAGAAAAGTAGATTATAC+AGG | + | chr1_3:29838370-29838389 | None:intergenic | 25.0% |
| ! | TTGAAATGATTCTACCATTA+TGG | - | chr1_3:29838387-29838406 | Msa0113780:intron | 25.0% |
| ! | TTTGTATTTCTTTCTCAGAT+TGG | - | chr1_3:29838728-29838747 | Msa0113780:intron | 25.0% |
| ! | TTGTATTTCTTTCTCAGATT+GGG | - | chr1_3:29838729-29838748 | Msa0113780:intron | 25.0% |
| !! | ATTTGATAGTTTGGAAGTAA+TGG | - | chr1_3:29838809-29838828 | Msa0113780:intron | 25.0% |
| CAGAAACAAATTACCGAATT+AGG | + | chr1_3:29833792-29833811 | None:intergenic | 30.0% | |
| !!! | TTGATTGTGTTGATTTTACG+TGG | - | chr1_3:29833823-29833842 | Msa0113780:intron | 30.0% |
| TAACTATGAAGCAATTGTCA+CGG | - | chr1_3:29834087-29834106 | Msa0113780:intron | 30.0% | |
| TTCTTAAATTACTACCAGTG+TGG | + | chr1_3:29834125-29834144 | None:intergenic | 30.0% | |
| GTTAAACATGTGTCATATAC+TGG | - | chr1_3:29834330-29834349 | Msa0113780:intron | 30.0% | |
| !! | AGTGTAAAGCTATTTTACAC+CGG | + | chr1_3:29834698-29834717 | None:intergenic | 30.0% |
| ! | TTAATTTTATGCTCTTGTGC+AGG | - | chr1_3:29834753-29834772 | Msa0113780:intron | 30.0% |
| ! | CTTCATAGCTTTTACTTCTT+TGG | + | chr1_3:29834830-29834849 | None:intergenic | 30.0% |
| AAATAATTCAGTGACGCAAA+GGG | + | chr1_3:29834944-29834963 | None:intergenic | 30.0% | |
| CACTGAATTATTTCGAATCA+AGG | - | chr1_3:29834951-29834970 | Msa0113780:intron | 30.0% | |
| !! | TTTTGAAGACAAGCATTTGA+GGG | - | chr1_3:29834987-29835006 | Msa0113780:intron | 30.0% |
| !! | ACTCATTATTGGTTTGTTTG+CGG | - | chr1_3:29835146-29835165 | Msa0113780:CDS | 30.0% |
| !! | AAAGTGTTGCTTATTAATGC+TGG | - | chr1_3:29835236-29835255 | Msa0113780:intron | 30.0% |
| !! | TTCCGAGCTTGTTATTTAAT+TGG | - | chr1_3:29835386-29835405 | Msa0113780:CDS | 30.0% |
| !! | TCCGAGCTTGTTATTTAATT+GGG | - | chr1_3:29835387-29835406 | Msa0113780:CDS | 30.0% |
| TCCCAATTAAATAACAAGCT+CGG | + | chr1_3:29835391-29835410 | None:intergenic | 30.0% | |
| TCGTAGAAAGTCTTTATGTT+TGG | - | chr1_3:29835441-29835460 | Msa0113780:intron | 30.0% | |
| AAAAAAGGGCAAAGTAGATT+AGG | + | chr1_3:29835657-29835676 | None:intergenic | 30.0% | |
| GGTTATCATAATAGAAGACA+TGG | + | chr1_3:29835713-29835732 | None:intergenic | 30.0% | |
| CTTACAATGAAAGTGAAAAC+GGG | + | chr1_3:29835818-29835837 | None:intergenic | 30.0% | |
| GCTTACAATGAAAGTGAAAA+CGG | + | chr1_3:29835819-29835838 | None:intergenic | 30.0% | |
| TCACATTCTTGAGAGAAAAA+TGG | + | chr1_3:29835952-29835971 | None:intergenic | 30.0% | |
| CTAATAAACTTGAGAATGAG+AGG | + | chr1_3:29836010-29836029 | None:intergenic | 30.0% | |
| AGATAAAAACCTGCAAACTA+GGG | + | chr1_3:29836211-29836230 | None:intergenic | 30.0% | |
| AAGATAAAAACCTGCAAACT+AGG | + | chr1_3:29836212-29836231 | None:intergenic | 30.0% | |
| TCTTGTATTTATGACAGAGA+CGG | - | chr1_3:29836231-29836250 | Msa0113780:CDS | 30.0% | |
| CGATATTTCTTCAATTAAGC+TGG | + | chr1_3:29836343-29836362 | None:intergenic | 30.0% | |
| TTAAAACTAGACTAAAAGGG+AGG | + | chr1_3:29836372-29836391 | None:intergenic | 30.0% | |
| !! | TCGGTTAAAAGCTGTTATTT+TGG | - | chr1_3:29836524-29836543 | Msa0113780:intron | 30.0% |
| !!! | GTTAAAAGCTGTTATTTTGG+TGG | - | chr1_3:29836527-29836546 | Msa0113780:intron | 30.0% |
| !!! | TAAAAGCTGTTATTTTGGTG+GGG | - | chr1_3:29836529-29836548 | Msa0113780:intron | 30.0% |
| ! | GAAGTTTCATGATCTTTTTG+TGG | - | chr1_3:29836587-29836606 | Msa0113780:intron | 30.0% |
| GTTACTAGGATGAAATTATG+AGG | + | chr1_3:29836856-29836875 | None:intergenic | 30.0% | |
| AAAGGTTATCAGTAGTTACT+AGG | + | chr1_3:29836870-29836889 | None:intergenic | 30.0% | |
| GGTCATCAAAGTCAAATAAT+CGG | + | chr1_3:29836917-29836936 | None:intergenic | 30.0% | |
| TGAAAGACTTAGGGATAAAA+AGG | - | chr1_3:29837025-29837044 | Msa0113780:intron | 30.0% | |
| !!! | AACAACCAAAATGCTTTTTC+AGG | - | chr1_3:29837099-29837118 | Msa0113780:intron | 30.0% |
| TACTGTAAGAAATGTTGTGA+AGG | - | chr1_3:29837172-29837191 | Msa0113780:intron | 30.0% | |
| ! | CAAAGCATCAAAACTTTACA+TGG | + | chr1_3:29837232-29837251 | None:intergenic | 30.0% |
| ! | TTTGATGCTTTGCTATGATA+AGG | - | chr1_3:29837240-29837259 | Msa0113780:CDS | 30.0% |
| !!! | AAAGGCACTGAATACTATTT+TGG | - | chr1_3:29837475-29837494 | Msa0113780:intron | 30.0% |
| !!! | CTATTTTGGTACAAAAGAGA+AGG | - | chr1_3:29837489-29837508 | Msa0113780:intron | 30.0% |
| CCATCAACTCTAAATAGAAA+AGG | + | chr1_3:29837686-29837705 | None:intergenic | 30.0% | |
| !! | CCTTTTCTATTTAGAGTTGA+TGG | - | chr1_3:29837683-29837702 | Msa0113780:CDS | 30.0% |
| CTATTGTGAGTAAAGTCAAT+AGG | - | chr1_3:29837764-29837783 | Msa0113780:intron | 30.0% | |
| ! | TATACGTTTGAGATACATCA+TGG | - | chr1_3:29837949-29837968 | Msa0113780:intron | 30.0% |
| ! | TTTTAGTAAACTGTGATCAC+AGG | - | chr1_3:29838059-29838078 | Msa0113780:intron | 30.0% |
| ! | TTGGTAGCAGAAGAATAATA+AGG | - | chr1_3:29838567-29838586 | Msa0113780:intron | 30.0% |
| TGGTAGCAGAAGAATAATAA+GGG | - | chr1_3:29838568-29838587 | Msa0113780:intron | 30.0% | |
| ATGAGTTTCCTGAAAAAACA+AGG | + | chr1_3:29838837-29838856 | None:intergenic | 30.0% | |
| !! | TGATTTGGTTTAACTTGTGA+AGG | + | chr1_3:29838943-29838962 | None:intergenic | 30.0% |
| CAGAAACAAATTACCGAATT+AGG | + | chr1_3:29833792-29833811 | None:intergenic | 30.0% | |
| !!! | TTGATTGTGTTGATTTTACG+TGG | - | chr1_3:29833823-29833842 | Msa0113780:intron | 30.0% |
| TAACTATGAAGCAATTGTCA+CGG | - | chr1_3:29834087-29834106 | Msa0113780:intron | 30.0% | |
| TTCTTAAATTACTACCAGTG+TGG | + | chr1_3:29834125-29834144 | None:intergenic | 30.0% | |
| GTTAAACATGTGTCATATAC+TGG | - | chr1_3:29834330-29834349 | Msa0113780:intron | 30.0% | |
| !! | AGTGTAAAGCTATTTTACAC+CGG | + | chr1_3:29834698-29834717 | None:intergenic | 30.0% |
| ! | TTAATTTTATGCTCTTGTGC+AGG | - | chr1_3:29834753-29834772 | Msa0113780:intron | 30.0% |
| ! | CTTCATAGCTTTTACTTCTT+TGG | + | chr1_3:29834830-29834849 | None:intergenic | 30.0% |
| AAATAATTCAGTGACGCAAA+GGG | + | chr1_3:29834944-29834963 | None:intergenic | 30.0% | |
| CACTGAATTATTTCGAATCA+AGG | - | chr1_3:29834951-29834970 | Msa0113780:intron | 30.0% | |
| !! | TTTTGAAGACAAGCATTTGA+GGG | - | chr1_3:29834987-29835006 | Msa0113780:intron | 30.0% |
| !! | ACTCATTATTGGTTTGTTTG+CGG | - | chr1_3:29835146-29835165 | Msa0113780:CDS | 30.0% |
| !! | AAAGTGTTGCTTATTAATGC+TGG | - | chr1_3:29835236-29835255 | Msa0113780:intron | 30.0% |
| !! | TTCCGAGCTTGTTATTTAAT+TGG | - | chr1_3:29835386-29835405 | Msa0113780:CDS | 30.0% |
| !! | TCCGAGCTTGTTATTTAATT+GGG | - | chr1_3:29835387-29835406 | Msa0113780:CDS | 30.0% |
| TCCCAATTAAATAACAAGCT+CGG | + | chr1_3:29835391-29835410 | None:intergenic | 30.0% | |
| TCGTAGAAAGTCTTTATGTT+TGG | - | chr1_3:29835441-29835460 | Msa0113780:intron | 30.0% | |
| AAAAAAGGGCAAAGTAGATT+AGG | + | chr1_3:29835657-29835676 | None:intergenic | 30.0% | |
| GGTTATCATAATAGAAGACA+TGG | + | chr1_3:29835713-29835732 | None:intergenic | 30.0% | |
| CTTACAATGAAAGTGAAAAC+GGG | + | chr1_3:29835818-29835837 | None:intergenic | 30.0% | |
| GCTTACAATGAAAGTGAAAA+CGG | + | chr1_3:29835819-29835838 | None:intergenic | 30.0% | |
| TCACATTCTTGAGAGAAAAA+TGG | + | chr1_3:29835952-29835971 | None:intergenic | 30.0% | |
| CTAATAAACTTGAGAATGAG+AGG | + | chr1_3:29836010-29836029 | None:intergenic | 30.0% | |
| AGATAAAAACCTGCAAACTA+GGG | + | chr1_3:29836211-29836230 | None:intergenic | 30.0% | |
| AAGATAAAAACCTGCAAACT+AGG | + | chr1_3:29836212-29836231 | None:intergenic | 30.0% | |
| TCTTGTATTTATGACAGAGA+CGG | - | chr1_3:29836231-29836250 | Msa0113780:CDS | 30.0% | |
| CGATATTTCTTCAATTAAGC+TGG | + | chr1_3:29836343-29836362 | None:intergenic | 30.0% | |
| TTAAAACTAGACTAAAAGGG+AGG | + | chr1_3:29836372-29836391 | None:intergenic | 30.0% | |
| !! | TCGGTTAAAAGCTGTTATTT+TGG | - | chr1_3:29836524-29836543 | Msa0113780:intron | 30.0% |
| !!! | GTTAAAAGCTGTTATTTTGG+TGG | - | chr1_3:29836527-29836546 | Msa0113780:intron | 30.0% |
| !!! | TAAAAGCTGTTATTTTGGTG+GGG | - | chr1_3:29836529-29836548 | Msa0113780:intron | 30.0% |
| ! | GAAGTTTCATGATCTTTTTG+TGG | - | chr1_3:29836587-29836606 | Msa0113780:intron | 30.0% |
| GTTACTAGGATGAAATTATG+AGG | + | chr1_3:29836856-29836875 | None:intergenic | 30.0% | |
| AAAGGTTATCAGTAGTTACT+AGG | + | chr1_3:29836870-29836889 | None:intergenic | 30.0% | |
| GGTCATCAAAGTCAAATAAT+CGG | + | chr1_3:29836917-29836936 | None:intergenic | 30.0% | |
| TGAAAGACTTAGGGATAAAA+AGG | - | chr1_3:29837025-29837044 | Msa0113780:intron | 30.0% | |
| !!! | AACAACCAAAATGCTTTTTC+AGG | - | chr1_3:29837099-29837118 | Msa0113780:intron | 30.0% |
| TACTGTAAGAAATGTTGTGA+AGG | - | chr1_3:29837172-29837191 | Msa0113780:intron | 30.0% | |
| ! | CAAAGCATCAAAACTTTACA+TGG | + | chr1_3:29837232-29837251 | None:intergenic | 30.0% |
| ! | TTTGATGCTTTGCTATGATA+AGG | - | chr1_3:29837240-29837259 | Msa0113780:CDS | 30.0% |
| !!! | AAAGGCACTGAATACTATTT+TGG | - | chr1_3:29837475-29837494 | Msa0113780:intron | 30.0% |
| !!! | CTATTTTGGTACAAAAGAGA+AGG | - | chr1_3:29837489-29837508 | Msa0113780:intron | 30.0% |
| CCATCAACTCTAAATAGAAA+AGG | + | chr1_3:29837686-29837705 | None:intergenic | 30.0% | |
| !! | CCTTTTCTATTTAGAGTTGA+TGG | - | chr1_3:29837683-29837702 | Msa0113780:CDS | 30.0% |
| CTATTGTGAGTAAAGTCAAT+AGG | - | chr1_3:29837764-29837783 | Msa0113780:intron | 30.0% | |
| ! | TATACGTTTGAGATACATCA+TGG | - | chr1_3:29837949-29837968 | Msa0113780:intron | 30.0% |
| ! | TTTTAGTAAACTGTGATCAC+AGG | - | chr1_3:29838059-29838078 | Msa0113780:intron | 30.0% |
| ! | TTGGTAGCAGAAGAATAATA+AGG | - | chr1_3:29838567-29838586 | Msa0113780:intron | 30.0% |
| TGGTAGCAGAAGAATAATAA+GGG | - | chr1_3:29838568-29838587 | Msa0113780:intron | 30.0% | |
| ATGAGTTTCCTGAAAAAACA+AGG | + | chr1_3:29838837-29838856 | None:intergenic | 30.0% | |
| !! | TGATTTGGTTTAACTTGTGA+AGG | + | chr1_3:29838943-29838962 | None:intergenic | 30.0% |
| TTGACGATGAAGTCTTTGTT+CGG | + | chr1_3:29833665-29833684 | None:intergenic | 35.0% | |
| GGTTACACAATAGACTTACT+TGG | - | chr1_3:29834489-29834508 | Msa0113780:intron | 35.0% | |
| TGTTAGACAAGGATATGTGT+CGG | - | chr1_3:29834641-29834660 | Msa0113780:intron | 35.0% | |
| AATGAAAACCTTTGTTGCAC+TGG | + | chr1_3:29834670-29834689 | None:intergenic | 35.0% | |
| ! | AGTGCAACAAAGGTTTTCAT+TGG | - | chr1_3:29834669-29834688 | Msa0113780:intron | 35.0% |
| GAAATAATTCAGTGACGCAA+AGG | + | chr1_3:29834945-29834964 | None:intergenic | 35.0% | |
| AAATGCTTGTCTTCAAAAGG+AGG | + | chr1_3:29834985-29835004 | None:intergenic | 35.0% | |
| CTCAAATGCTTGTCTTCAAA+AGG | + | chr1_3:29834988-29835007 | None:intergenic | 35.0% | |
| !! | CTTTTGAAGACAAGCATTTG+AGG | - | chr1_3:29834986-29835005 | Msa0113780:intron | 35.0% |
| !! | GGTTAAAGTATTGGATACTG+TGG | - | chr1_3:29835206-29835225 | Msa0113780:intron | 35.0% |
| TCAAACAAAAGCAAAGAGAG+AGG | + | chr1_3:29835420-29835439 | None:intergenic | 35.0% | |
| ! | AACCATTTTGAATGAAAGCG+AGG | - | chr1_3:29835729-29835748 | Msa0113780:intron | 35.0% |
| TTCCTCGCTTTCATTCAAAA+TGG | + | chr1_3:29835734-29835753 | None:intergenic | 35.0% | |
| !!! | CTTTGACTTTTTTTGCCAAC+AGG | - | chr1_3:29836113-29836132 | Msa0113780:intron | 35.0% |
| !! | AGTTGATAAGAAGCACAAGT+TGG | + | chr1_3:29836141-29836160 | None:intergenic | 35.0% |
| AATTAGTACTTGTGCTCATG+AGG | - | chr1_3:29836173-29836192 | Msa0113780:intron | 35.0% | |
| GTATACAAGCTAGGTTCAAT+TGG | - | chr1_3:29836396-29836415 | Msa0113780:intron | 35.0% | |
| ! | TAGATTTTCTGATACGTCTG+TGG | - | chr1_3:29836620-29836639 | Msa0113780:intron | 35.0% |
| ! | TCTATGTGGCAAATCCTTTT+GGG | - | chr1_3:29836679-29836698 | Msa0113780:intron | 35.0% |
| ! | TCAAGTTTTTCTCTCCCAAA+AGG | + | chr1_3:29836696-29836715 | None:intergenic | 35.0% |
| GTTTGTTCCCTTGAAACTAA+TGG | - | chr1_3:29836992-29837011 | Msa0113780:intron | 35.0% | |
| ! | ACTTCAGCCATTAGTTTCAA+GGG | + | chr1_3:29837002-29837021 | None:intergenic | 35.0% |
| ! | TGAAGTCTCTGAAAGACTTA+GGG | - | chr1_3:29837016-29837035 | Msa0113780:intron | 35.0% |
| TATGTATTGTGTCCTTGATC+AGG | + | chr1_3:29837073-29837092 | None:intergenic | 35.0% | |
| !!! | AGACACCTGAAAAAGCATTT+TGG | + | chr1_3:29837107-29837126 | None:intergenic | 35.0% |
| TATTTCCATCAACTTCTGTG+AGG | + | chr1_3:29837143-29837162 | None:intergenic | 35.0% | |
| TTGCTATGATAAGGATTGCA+AGG | - | chr1_3:29837249-29837268 | Msa0113780:CDS | 35.0% | |
| TTTCAGTCCTCTTCATGAAA+AGG | - | chr1_3:29837457-29837476 | Msa0113780:intron | 35.0% | |
| CAAACATAGCACATTGGTAT+TGG | + | chr1_3:29837517-29837536 | None:intergenic | 35.0% | |
| TACCAATGTGCTATGTTTGA+AGG | - | chr1_3:29837518-29837537 | Msa0113780:intron | 35.0% | |
| GGCAATACGGAAGAAATTAA+AGG | - | chr1_3:29837608-29837627 | Msa0113780:CDS | 35.0% | |
| GAAGCCTGGATACTAAAAAA+TGG | - | chr1_3:29837817-29837836 | Msa0113780:intron | 35.0% | |
| TATTTGTGTCGGATGTGTAT+TGG | - | chr1_3:29837845-29837864 | Msa0113780:intron | 35.0% | |
| TAATGCTCGTAGGATACTAT+CGG | - | chr1_3:29837872-29837891 | Msa0113780:intron | 35.0% | |
| TGATTCTACCATTATGGTCA+TGG | - | chr1_3:29838393-29838412 | Msa0113780:intron | 35.0% | |
| !!! | GTGTTGGTGTTTTAATACTG+TGG | - | chr1_3:29838525-29838544 | Msa0113780:intron | 35.0% |
| ATACTGTGGAACTAGAATGT+TGG | - | chr1_3:29838539-29838558 | Msa0113780:intron | 35.0% | |
| !! | AACTAGAATGTTGGTTCTCT+TGG | - | chr1_3:29838548-29838567 | Msa0113780:intron | 35.0% |
| GCAGAAGAATAATAAGGGTT+TGG | - | chr1_3:29838573-29838592 | Msa0113780:intron | 35.0% | |
| AATAAGGGTTTGGAGAGTAA+TGG | - | chr1_3:29838583-29838602 | Msa0113780:intron | 35.0% | |
| ! | AGTACAGGTTGCTATTCTTA+TGG | - | chr1_3:29838645-29838664 | Msa0113780:intron | 35.0% |
| TCTTGTCAACATGTTGCATA+TGG | - | chr1_3:29838766-29838785 | Msa0113780:intron | 35.0% | |
| !! | CTCTGACTGATTTGATAGTT+TGG | - | chr1_3:29838800-29838819 | Msa0113780:intron | 35.0% |
| !!! | TAATGGAGCCTTGTTTTTTC+AGG | - | chr1_3:29838826-29838845 | Msa0113780:intron | 35.0% |
| ! | TGAAAGCGTGTTCACAAAAA+TGG | - | chr1_3:29838880-29838899 | Msa0113780:CDS | 35.0% |
| GAAGAACCAACTTTCACAAT+TGG | - | chr1_3:29839001-29839020 | Msa0113780:five_prime_UTR | 35.0% | |
| GTTTGTCCAATTGTGAAAGT+TGG | + | chr1_3:29839010-29839029 | None:intergenic | 35.0% | |
| TTGACGATGAAGTCTTTGTT+CGG | + | chr1_3:29833665-29833684 | None:intergenic | 35.0% | |
| GGTTACACAATAGACTTACT+TGG | - | chr1_3:29834489-29834508 | Msa0113780:intron | 35.0% | |
| TGTTAGACAAGGATATGTGT+CGG | - | chr1_3:29834641-29834660 | Msa0113780:intron | 35.0% | |
| AATGAAAACCTTTGTTGCAC+TGG | + | chr1_3:29834670-29834689 | None:intergenic | 35.0% | |
| ! | AGTGCAACAAAGGTTTTCAT+TGG | - | chr1_3:29834669-29834688 | Msa0113780:intron | 35.0% |
| GAAATAATTCAGTGACGCAA+AGG | + | chr1_3:29834945-29834964 | None:intergenic | 35.0% | |
| AAATGCTTGTCTTCAAAAGG+AGG | + | chr1_3:29834985-29835004 | None:intergenic | 35.0% | |
| CTCAAATGCTTGTCTTCAAA+AGG | + | chr1_3:29834988-29835007 | None:intergenic | 35.0% | |
| !! | CTTTTGAAGACAAGCATTTG+AGG | - | chr1_3:29834986-29835005 | Msa0113780:intron | 35.0% |
| !! | GGTTAAAGTATTGGATACTG+TGG | - | chr1_3:29835206-29835225 | Msa0113780:intron | 35.0% |
| TCAAACAAAAGCAAAGAGAG+AGG | + | chr1_3:29835420-29835439 | None:intergenic | 35.0% | |
| ! | AACCATTTTGAATGAAAGCG+AGG | - | chr1_3:29835729-29835748 | Msa0113780:intron | 35.0% |
| TTCCTCGCTTTCATTCAAAA+TGG | + | chr1_3:29835734-29835753 | None:intergenic | 35.0% | |
| !!! | CTTTGACTTTTTTTGCCAAC+AGG | - | chr1_3:29836113-29836132 | Msa0113780:intron | 35.0% |
| !! | AGTTGATAAGAAGCACAAGT+TGG | + | chr1_3:29836141-29836160 | None:intergenic | 35.0% |
| AATTAGTACTTGTGCTCATG+AGG | - | chr1_3:29836173-29836192 | Msa0113780:intron | 35.0% | |
| GTATACAAGCTAGGTTCAAT+TGG | - | chr1_3:29836396-29836415 | Msa0113780:intron | 35.0% | |
| ! | TAGATTTTCTGATACGTCTG+TGG | - | chr1_3:29836620-29836639 | Msa0113780:intron | 35.0% |
| ! | TCTATGTGGCAAATCCTTTT+GGG | - | chr1_3:29836679-29836698 | Msa0113780:intron | 35.0% |
| ! | TCAAGTTTTTCTCTCCCAAA+AGG | + | chr1_3:29836696-29836715 | None:intergenic | 35.0% |
| GTTTGTTCCCTTGAAACTAA+TGG | - | chr1_3:29836992-29837011 | Msa0113780:intron | 35.0% | |
| ! | ACTTCAGCCATTAGTTTCAA+GGG | + | chr1_3:29837002-29837021 | None:intergenic | 35.0% |
| ! | TGAAGTCTCTGAAAGACTTA+GGG | - | chr1_3:29837016-29837035 | Msa0113780:intron | 35.0% |
| TATGTATTGTGTCCTTGATC+AGG | + | chr1_3:29837073-29837092 | None:intergenic | 35.0% | |
| !!! | AGACACCTGAAAAAGCATTT+TGG | + | chr1_3:29837107-29837126 | None:intergenic | 35.0% |
| TATTTCCATCAACTTCTGTG+AGG | + | chr1_3:29837143-29837162 | None:intergenic | 35.0% | |
| TTGCTATGATAAGGATTGCA+AGG | - | chr1_3:29837249-29837268 | Msa0113780:CDS | 35.0% | |
| TTTCAGTCCTCTTCATGAAA+AGG | - | chr1_3:29837457-29837476 | Msa0113780:intron | 35.0% | |
| CAAACATAGCACATTGGTAT+TGG | + | chr1_3:29837517-29837536 | None:intergenic | 35.0% | |
| TACCAATGTGCTATGTTTGA+AGG | - | chr1_3:29837518-29837537 | Msa0113780:intron | 35.0% | |
| GGCAATACGGAAGAAATTAA+AGG | - | chr1_3:29837608-29837627 | Msa0113780:CDS | 35.0% | |
| GAAGCCTGGATACTAAAAAA+TGG | - | chr1_3:29837817-29837836 | Msa0113780:intron | 35.0% | |
| TATTTGTGTCGGATGTGTAT+TGG | - | chr1_3:29837845-29837864 | Msa0113780:intron | 35.0% | |
| TAATGCTCGTAGGATACTAT+CGG | - | chr1_3:29837872-29837891 | Msa0113780:intron | 35.0% | |
| TGATTCTACCATTATGGTCA+TGG | - | chr1_3:29838393-29838412 | Msa0113780:intron | 35.0% | |
| !!! | GTGTTGGTGTTTTAATACTG+TGG | - | chr1_3:29838525-29838544 | Msa0113780:intron | 35.0% |
| ATACTGTGGAACTAGAATGT+TGG | - | chr1_3:29838539-29838558 | Msa0113780:intron | 35.0% | |
| !! | AACTAGAATGTTGGTTCTCT+TGG | - | chr1_3:29838548-29838567 | Msa0113780:intron | 35.0% |
| GCAGAAGAATAATAAGGGTT+TGG | - | chr1_3:29838573-29838592 | Msa0113780:intron | 35.0% | |
| AATAAGGGTTTGGAGAGTAA+TGG | - | chr1_3:29838583-29838602 | Msa0113780:intron | 35.0% | |
| ! | AGTACAGGTTGCTATTCTTA+TGG | - | chr1_3:29838645-29838664 | Msa0113780:intron | 35.0% |
| TCTTGTCAACATGTTGCATA+TGG | - | chr1_3:29838766-29838785 | Msa0113780:intron | 35.0% | |
| !! | CTCTGACTGATTTGATAGTT+TGG | - | chr1_3:29838800-29838819 | Msa0113780:intron | 35.0% |
| !!! | TAATGGAGCCTTGTTTTTTC+AGG | - | chr1_3:29838826-29838845 | Msa0113780:intron | 35.0% |
| ! | TGAAAGCGTGTTCACAAAAA+TGG | - | chr1_3:29838880-29838899 | Msa0113780:CDS | 35.0% |
| GAAGAACCAACTTTCACAAT+TGG | - | chr1_3:29839001-29839020 | Msa0113780:five_prime_UTR | 35.0% | |
| GTTTGTCCAATTGTGAAAGT+TGG | + | chr1_3:29839010-29839029 | None:intergenic | 35.0% | |
| CTCAAACTCATCTCCGATAT+CGG | - | chr1_3:29833614-29833633 | Msa0113780:CDS | 40.0% | |
| AATGTTTATGTGTCGGACAC+CGG | - | chr1_3:29834259-29834278 | Msa0113780:intron | 40.0% | |
| !! | GCAAAATGGTGGATTCTCAT+TGG | + | chr1_3:29834452-29834471 | None:intergenic | 40.0% |
| GAAGCACAAACACATACACA+AGG | - | chr1_3:29834535-29834554 | Msa0113780:intron | 40.0% | |
| CTGAATGTACTCAGATGTGT+CGG | - | chr1_3:29834607-29834626 | Msa0113780:intron | 40.0% | |
| ! | CAAAGGTTTTCATTGGATGC+CGG | - | chr1_3:29834676-29834695 | Msa0113780:intron | 40.0% |
| TTTACTTCTTTGGCTGTTCG+CGG | + | chr1_3:29834820-29834839 | None:intergenic | 40.0% | |
| TTGTCTTCAAAAGGAGGTTC+AGG | + | chr1_3:29834979-29834998 | None:intergenic | 40.0% | |
| ACTCGAGTTTGTGATTGTGA+AGG | - | chr1_3:29835045-29835064 | Msa0113780:CDS | 40.0% | |
| !! | TATTGGTTTGTTTGCGGATC+TGG | - | chr1_3:29835152-29835171 | Msa0113780:CDS | 40.0% |
| !! | GTGTTGCTTATTAATGCTGG+AGG | - | chr1_3:29835239-29835258 | Msa0113780:intron | 40.0% |
| ! | AGAGAGTGCAAGAGAATGTA+GGG | + | chr1_3:29835332-29835351 | None:intergenic | 40.0% |
| TAAACAACTAAGCACGAGGA+GGG | + | chr1_3:29835359-29835378 | None:intergenic | 40.0% | |
| TTAAACAACTAAGCACGAGG+AGG | + | chr1_3:29835360-29835379 | None:intergenic | 40.0% | |
| GAGTTAAACAACTAAGCACG+AGG | + | chr1_3:29835363-29835382 | None:intergenic | 40.0% | |
| !!! | TCTACTTTGCCCTTTTTTGC+AGG | - | chr1_3:29835659-29835678 | Msa0113780:intron | 40.0% |
| !!! | CTACTTTGCCCTTTTTTGCA+GGG | - | chr1_3:29835660-29835679 | Msa0113780:intron | 40.0% |
| ! | ACAAGCTTTGTACGAGAAGT+TGG | - | chr1_3:29835881-29835900 | Msa0113780:CDS | 40.0% |
| CAAGAATGTGACTGTTATCC+TGG | - | chr1_3:29835961-29835980 | Msa0113780:CDS | 40.0% | |
| AAAAGTCTGTCAAGCATTCC+AGG | + | chr1_3:29835982-29836001 | None:intergenic | 40.0% | |
| ! | ATGACTGCAAGAAGCATATG+AGG | + | chr1_3:29836318-29836337 | None:intergenic | 40.0% |
| ATCCAATTTGTAGGCTGATC+AGG | - | chr1_3:29836494-29836513 | Msa0113780:intron | 40.0% | |
| AACCTGATCAGCCTACAAAT+TGG | + | chr1_3:29836499-29836518 | None:intergenic | 40.0% | |
| !! | AGGCTGATCAGGTTGATATT+CGG | - | chr1_3:29836505-29836524 | Msa0113780:intron | 40.0% |
| CATGAAACTTCTGTGCAACA+TGG | + | chr1_3:29836578-29836597 | None:intergenic | 40.0% | |
| ATTTGCCACATAGACAGCTT+TGG | + | chr1_3:29836673-29836692 | None:intergenic | 40.0% | |
| ! | GTCTATGTGGCAAATCCTTT+TGG | - | chr1_3:29836678-29836697 | Msa0113780:intron | 40.0% |
| GTCTGAACTGCAAATATCAC+AGG | + | chr1_3:29836967-29836986 | None:intergenic | 40.0% | |
| GTTTCAAGGGAACAAACATC+AGG | + | chr1_3:29836989-29837008 | None:intergenic | 40.0% | |
| ! | GACTTCAGCCATTAGTTTCA+AGG | + | chr1_3:29837003-29837022 | None:intergenic | 40.0% |
| ! | CTGAAGTCTCTGAAAGACTT+AGG | - | chr1_3:29837015-29837034 | Msa0113780:intron | 40.0% |
| ! | TGAGTTTGTTTGCCTGATCA+AGG | - | chr1_3:29837058-29837077 | Msa0113780:intron | 40.0% |
| !!! | TGCTTTTTCAGGTGTCTGTT+AGG | - | chr1_3:29837110-29837129 | Msa0113780:intron | 40.0% |
| GAAATGTTGTGAAGGAAGCA+TGG | - | chr1_3:29837180-29837199 | Msa0113780:intron | 40.0% | |
| ATAAGGATTGCAAGGAGTTC+AGG | - | chr1_3:29837257-29837276 | Msa0113780:CDS | 40.0% | |
| AAGAACCAATTCCATGCTCT+GGG | + | chr1_3:29837366-29837385 | None:intergenic | 40.0% | |
| ! | TTCAGTGCCTTTTCATGAAG+AGG | + | chr1_3:29837467-29837486 | None:intergenic | 40.0% |
| CACCTTCAAACATAGCACAT+TGG | + | chr1_3:29837523-29837542 | None:intergenic | 40.0% | |
| TATAACAAAGGGCAGACCAT+TGG | - | chr1_3:29837658-29837677 | Msa0113780:CDS | 40.0% | |
| ATAACAAAGGGCAGACCATT+GGG | - | chr1_3:29837659-29837678 | Msa0113780:CDS | 40.0% | |
| CTAAATAGAAAAGGGCCCAA+TGG | + | chr1_3:29837677-29837696 | None:intergenic | 40.0% | |
| TATTGGATGCTAATGCTCGT+AGG | - | chr1_3:29837862-29837881 | Msa0113780:intron | 40.0% | |
| AAAGTTGTGAAGCTTCGCTT+TGG | + | chr1_3:29838023-29838042 | None:intergenic | 40.0% | |
| TATTCACATATCCACGTCCA+TGG | - | chr1_3:29838245-29838264 | Msa0113780:intron | 40.0% | |
| !!! | GATTTTAACTACCATGGACG+TGG | + | chr1_3:29838259-29838278 | None:intergenic | 40.0% |
| TTCTACCATTATGGTCATGG+TGG | - | chr1_3:29838396-29838415 | Msa0113780:intron | 40.0% | |
| CTCAAACTCATCTCCGATAT+CGG | - | chr1_3:29833614-29833633 | Msa0113780:CDS | 40.0% | |
| AATGTTTATGTGTCGGACAC+CGG | - | chr1_3:29834259-29834278 | Msa0113780:intron | 40.0% | |
| !! | GCAAAATGGTGGATTCTCAT+TGG | + | chr1_3:29834452-29834471 | None:intergenic | 40.0% |
| GAAGCACAAACACATACACA+AGG | - | chr1_3:29834535-29834554 | Msa0113780:intron | 40.0% | |
| CTGAATGTACTCAGATGTGT+CGG | - | chr1_3:29834607-29834626 | Msa0113780:intron | 40.0% | |
| ! | CAAAGGTTTTCATTGGATGC+CGG | - | chr1_3:29834676-29834695 | Msa0113780:intron | 40.0% |
| TTTACTTCTTTGGCTGTTCG+CGG | + | chr1_3:29834820-29834839 | None:intergenic | 40.0% | |
| TTGTCTTCAAAAGGAGGTTC+AGG | + | chr1_3:29834979-29834998 | None:intergenic | 40.0% | |
| ACTCGAGTTTGTGATTGTGA+AGG | - | chr1_3:29835045-29835064 | Msa0113780:CDS | 40.0% | |
| !! | TATTGGTTTGTTTGCGGATC+TGG | - | chr1_3:29835152-29835171 | Msa0113780:CDS | 40.0% |
| !! | GTGTTGCTTATTAATGCTGG+AGG | - | chr1_3:29835239-29835258 | Msa0113780:intron | 40.0% |
| ! | AGAGAGTGCAAGAGAATGTA+GGG | + | chr1_3:29835332-29835351 | None:intergenic | 40.0% |
| TAAACAACTAAGCACGAGGA+GGG | + | chr1_3:29835359-29835378 | None:intergenic | 40.0% | |
| TTAAACAACTAAGCACGAGG+AGG | + | chr1_3:29835360-29835379 | None:intergenic | 40.0% | |
| GAGTTAAACAACTAAGCACG+AGG | + | chr1_3:29835363-29835382 | None:intergenic | 40.0% | |
| !!! | TCTACTTTGCCCTTTTTTGC+AGG | - | chr1_3:29835659-29835678 | Msa0113780:intron | 40.0% |
| !!! | CTACTTTGCCCTTTTTTGCA+GGG | - | chr1_3:29835660-29835679 | Msa0113780:intron | 40.0% |
| ! | ACAAGCTTTGTACGAGAAGT+TGG | - | chr1_3:29835881-29835900 | Msa0113780:CDS | 40.0% |
| CAAGAATGTGACTGTTATCC+TGG | - | chr1_3:29835961-29835980 | Msa0113780:CDS | 40.0% | |
| AAAAGTCTGTCAAGCATTCC+AGG | + | chr1_3:29835982-29836001 | None:intergenic | 40.0% | |
| ! | ATGACTGCAAGAAGCATATG+AGG | + | chr1_3:29836318-29836337 | None:intergenic | 40.0% |
| ATCCAATTTGTAGGCTGATC+AGG | - | chr1_3:29836494-29836513 | Msa0113780:intron | 40.0% | |
| AACCTGATCAGCCTACAAAT+TGG | + | chr1_3:29836499-29836518 | None:intergenic | 40.0% | |
| !! | AGGCTGATCAGGTTGATATT+CGG | - | chr1_3:29836505-29836524 | Msa0113780:intron | 40.0% |
| CATGAAACTTCTGTGCAACA+TGG | + | chr1_3:29836578-29836597 | None:intergenic | 40.0% | |
| ATTTGCCACATAGACAGCTT+TGG | + | chr1_3:29836673-29836692 | None:intergenic | 40.0% | |
| ! | GTCTATGTGGCAAATCCTTT+TGG | - | chr1_3:29836678-29836697 | Msa0113780:intron | 40.0% |
| GTCTGAACTGCAAATATCAC+AGG | + | chr1_3:29836967-29836986 | None:intergenic | 40.0% | |
| GTTTCAAGGGAACAAACATC+AGG | + | chr1_3:29836989-29837008 | None:intergenic | 40.0% | |
| ! | GACTTCAGCCATTAGTTTCA+AGG | + | chr1_3:29837003-29837022 | None:intergenic | 40.0% |
| ! | CTGAAGTCTCTGAAAGACTT+AGG | - | chr1_3:29837015-29837034 | Msa0113780:intron | 40.0% |
| ! | TGAGTTTGTTTGCCTGATCA+AGG | - | chr1_3:29837058-29837077 | Msa0113780:intron | 40.0% |
| !!! | TGCTTTTTCAGGTGTCTGTT+AGG | - | chr1_3:29837110-29837129 | Msa0113780:intron | 40.0% |
| GAAATGTTGTGAAGGAAGCA+TGG | - | chr1_3:29837180-29837199 | Msa0113780:intron | 40.0% | |
| ATAAGGATTGCAAGGAGTTC+AGG | - | chr1_3:29837257-29837276 | Msa0113780:CDS | 40.0% | |
| AAGAACCAATTCCATGCTCT+GGG | + | chr1_3:29837366-29837385 | None:intergenic | 40.0% | |
| ! | TTCAGTGCCTTTTCATGAAG+AGG | + | chr1_3:29837467-29837486 | None:intergenic | 40.0% |
| CACCTTCAAACATAGCACAT+TGG | + | chr1_3:29837523-29837542 | None:intergenic | 40.0% | |
| TATAACAAAGGGCAGACCAT+TGG | - | chr1_3:29837658-29837677 | Msa0113780:CDS | 40.0% | |
| ATAACAAAGGGCAGACCATT+GGG | - | chr1_3:29837659-29837678 | Msa0113780:CDS | 40.0% | |
| CTAAATAGAAAAGGGCCCAA+TGG | + | chr1_3:29837677-29837696 | None:intergenic | 40.0% | |
| TATTGGATGCTAATGCTCGT+AGG | - | chr1_3:29837862-29837881 | Msa0113780:intron | 40.0% | |
| AAAGTTGTGAAGCTTCGCTT+TGG | + | chr1_3:29838023-29838042 | None:intergenic | 40.0% | |
| TATTCACATATCCACGTCCA+TGG | - | chr1_3:29838245-29838264 | Msa0113780:intron | 40.0% | |
| !!! | GATTTTAACTACCATGGACG+TGG | + | chr1_3:29838259-29838278 | None:intergenic | 40.0% |
| TTCTACCATTATGGTCATGG+TGG | - | chr1_3:29838396-29838415 | Msa0113780:intron | 40.0% | |
| !! | GTGAGTGTGAGGGTTTGTTT+TGG | + | chr1_3:29833530-29833549 | None:intergenic | 45.0% |
| TGTGTTGAGTGTGAGTGTGA+GGG | + | chr1_3:29833540-29833559 | None:intergenic | 45.0% | |
| TTGTGTTGAGTGTGAGTGTG+AGG | + | chr1_3:29833541-29833560 | None:intergenic | 45.0% | |
| ! | AGCGAGTTGAGTTCCGATAT+CGG | + | chr1_3:29833630-29833649 | None:intergenic | 45.0% |
| AGTCATCAAGATGATGCGTG+AGG | - | chr1_3:29834058-29834077 | Msa0113780:intron | 45.0% | |
| AACGTGTTTGTGTCAGACAC+CGG | - | chr1_3:29834168-29834187 | Msa0113780:intron | 45.0% | |
| ! | TGTTGTGTCGCTGTTAGACA+AGG | - | chr1_3:29834630-29834649 | Msa0113780:intron | 45.0% |
| CAAACCACAGCATCTATCAG+TGG | + | chr1_3:29834874-29834893 | None:intergenic | 45.0% | |
| CTGATAGATGCTGTGGTTTG+TGG | - | chr1_3:29834874-29834893 | Msa0113780:intron | 45.0% | |
| ! | ATAGATGCTGTGGTTTGTGG+CGG | - | chr1_3:29834877-29834896 | Msa0113780:intron | 45.0% |
| TCTTCTTCAGCATGGGGATA+AGG | - | chr1_3:29834900-29834919 | Msa0113780:intron | 45.0% | |
| CGTTGAACATCTCGAGAACA+AGG | + | chr1_3:29835278-29835297 | None:intergenic | 45.0% | |
| ! | ACGTTTTCTTCTCAGCTGTG+AGG | - | chr1_3:29835295-29835314 | Msa0113780:CDS | 45.0% |
| ! | GAGAGAGTGCAAGAGAATGT+AGG | + | chr1_3:29835333-29835352 | None:intergenic | 45.0% |
| AAACAACTAAGCACGAGGAG+GGG | + | chr1_3:29835358-29835377 | None:intergenic | 45.0% | |
| GTGACGATCCCTGCAAAAAA+GGG | + | chr1_3:29835671-29835690 | None:intergenic | 45.0% | |
| ! | AAGCACAAGTTGGATCCTGT+TGG | + | chr1_3:29836131-29836150 | None:intergenic | 45.0% |
| TATTTATGACAGAGACGGCG+TGG | - | chr1_3:29836236-29836255 | Msa0113780:CDS | 45.0% | |
| ATTTATGACAGAGACGGCGT+GGG | - | chr1_3:29836237-29836256 | Msa0113780:CDS | 45.0% | |
| ATGTGCCAAAGCTGTCTATG+TGG | - | chr1_3:29836665-29836684 | Msa0113780:intron | 45.0% | |
| ! | TTGACTTTGATGACCGAGTG+AGG | - | chr1_3:29836922-29836941 | Msa0113780:intron | 45.0% |
| TCAGGTGTCTGTTAGGAAGA+AGG | - | chr1_3:29837117-29837136 | Msa0113780:intron | 45.0% | |
| GAATTTCAGATCCCAGAGCA+TGG | - | chr1_3:29837352-29837371 | Msa0113780:CDS | 45.0% | |
| CAAGAACCAATTCCATGCTC+TGG | + | chr1_3:29837367-29837386 | None:intergenic | 45.0% | |
| TTCCGCAACAGAAAGATGCT+CGG | + | chr1_3:29837405-29837424 | None:intergenic | 45.0% | |
| AGCATCTTTCTGTTGCGGAA+AGG | - | chr1_3:29837405-29837424 | Msa0113780:intron | 45.0% | |
| TATCCAGGCTTCATAGCTTG+AGG | + | chr1_3:29837809-29837828 | None:intergenic | 45.0% | |
| AAGCTTCGCTTTGGTTACGA+GGG | + | chr1_3:29838014-29838033 | None:intergenic | 45.0% | |
| TACCATTATGGTCATGGTGG+TGG | - | chr1_3:29838399-29838418 | Msa0113780:intron | 45.0% | |
| TTCCACCACCATGACCATAA+TGG | + | chr1_3:29838404-29838423 | None:intergenic | 45.0% | |
| GGGTTTGGAGAGTAATGGTT+TGG | - | chr1_3:29838588-29838607 | Msa0113780:intron | 45.0% | |
| !! | GTGAGTGTGAGGGTTTGTTT+TGG | + | chr1_3:29833530-29833549 | None:intergenic | 45.0% |
| TGTGTTGAGTGTGAGTGTGA+GGG | + | chr1_3:29833540-29833559 | None:intergenic | 45.0% | |
| TTGTGTTGAGTGTGAGTGTG+AGG | + | chr1_3:29833541-29833560 | None:intergenic | 45.0% | |
| ! | AGCGAGTTGAGTTCCGATAT+CGG | + | chr1_3:29833630-29833649 | None:intergenic | 45.0% |
| AGTCATCAAGATGATGCGTG+AGG | - | chr1_3:29834058-29834077 | Msa0113780:intron | 45.0% | |
| AACGTGTTTGTGTCAGACAC+CGG | - | chr1_3:29834168-29834187 | Msa0113780:intron | 45.0% | |
| ! | TGTTGTGTCGCTGTTAGACA+AGG | - | chr1_3:29834630-29834649 | Msa0113780:intron | 45.0% |
| CAAACCACAGCATCTATCAG+TGG | + | chr1_3:29834874-29834893 | None:intergenic | 45.0% | |
| CTGATAGATGCTGTGGTTTG+TGG | - | chr1_3:29834874-29834893 | Msa0113780:intron | 45.0% | |
| ! | ATAGATGCTGTGGTTTGTGG+CGG | - | chr1_3:29834877-29834896 | Msa0113780:intron | 45.0% |
| TCTTCTTCAGCATGGGGATA+AGG | - | chr1_3:29834900-29834919 | Msa0113780:intron | 45.0% | |
| CGTTGAACATCTCGAGAACA+AGG | + | chr1_3:29835278-29835297 | None:intergenic | 45.0% | |
| ! | ACGTTTTCTTCTCAGCTGTG+AGG | - | chr1_3:29835295-29835314 | Msa0113780:CDS | 45.0% |
| ! | GAGAGAGTGCAAGAGAATGT+AGG | + | chr1_3:29835333-29835352 | None:intergenic | 45.0% |
| AAACAACTAAGCACGAGGAG+GGG | + | chr1_3:29835358-29835377 | None:intergenic | 45.0% | |
| GTGACGATCCCTGCAAAAAA+GGG | + | chr1_3:29835671-29835690 | None:intergenic | 45.0% | |
| ! | AAGCACAAGTTGGATCCTGT+TGG | + | chr1_3:29836131-29836150 | None:intergenic | 45.0% |
| TATTTATGACAGAGACGGCG+TGG | - | chr1_3:29836236-29836255 | Msa0113780:CDS | 45.0% | |
| ATTTATGACAGAGACGGCGT+GGG | - | chr1_3:29836237-29836256 | Msa0113780:CDS | 45.0% | |
| ATGTGCCAAAGCTGTCTATG+TGG | - | chr1_3:29836665-29836684 | Msa0113780:intron | 45.0% | |
| ! | TTGACTTTGATGACCGAGTG+AGG | - | chr1_3:29836922-29836941 | Msa0113780:intron | 45.0% |
| TCAGGTGTCTGTTAGGAAGA+AGG | - | chr1_3:29837117-29837136 | Msa0113780:intron | 45.0% | |
| GAATTTCAGATCCCAGAGCA+TGG | - | chr1_3:29837352-29837371 | Msa0113780:CDS | 45.0% | |
| CAAGAACCAATTCCATGCTC+TGG | + | chr1_3:29837367-29837386 | None:intergenic | 45.0% | |
| TTCCGCAACAGAAAGATGCT+CGG | + | chr1_3:29837405-29837424 | None:intergenic | 45.0% | |
| AGCATCTTTCTGTTGCGGAA+AGG | - | chr1_3:29837405-29837424 | Msa0113780:intron | 45.0% | |
| TATCCAGGCTTCATAGCTTG+AGG | + | chr1_3:29837809-29837828 | None:intergenic | 45.0% | |
| AAGCTTCGCTTTGGTTACGA+GGG | + | chr1_3:29838014-29838033 | None:intergenic | 45.0% | |
| TACCATTATGGTCATGGTGG+TGG | - | chr1_3:29838399-29838418 | Msa0113780:intron | 45.0% | |
| TTCCACCACCATGACCATAA+TGG | + | chr1_3:29838404-29838423 | None:intergenic | 45.0% | |
| GGGTTTGGAGAGTAATGGTT+TGG | - | chr1_3:29838588-29838607 | Msa0113780:intron | 45.0% | |
| !!! | TTTTAATTATTTTTAAAAAG+TGG | - | chr1_3:29837920-29837939 | Msa0113780:intron | 5.0% |
| !!! | TTTTAATTATTTTTAAAAAG+TGG | - | chr1_3:29837920-29837939 | Msa0113780:intron | 5.0% |
| ACCTTCTCTCGATTCCACCA+TGG | - | chr1_3:29833580-29833599 | Msa0113780:CDS | 50.0% | |
| ! | TCCATGGTGGAATCGAGAGA+AGG | + | chr1_3:29833584-29833603 | None:intergenic | 50.0% |
| TTTGAGCGAGGTGAGATCCA+TGG | + | chr1_3:29833600-29833619 | None:intergenic | 50.0% | |
| ATCGGAGATGAGTTTGAGCG+AGG | + | chr1_3:29833612-29833631 | None:intergenic | 50.0% | |
| TGTCAGTGTCGTGTCGTATC+CGG | + | chr1_3:29834190-29834209 | None:intergenic | 50.0% | |
| GTCGGATACCAGTGCAACAA+AGG | - | chr1_3:29834659-29834678 | Msa0113780:intron | 50.0% | |
| GAAGCCACTGATAGATGCTG+TGG | - | chr1_3:29834867-29834886 | Msa0113780:intron | 50.0% | |
| ! | TAAGTGATGGGGTGCAGTAG+TGG | - | chr1_3:29835556-29835575 | Msa0113780:CDS | 50.0% |
| CGTGACGATCCCTGCAAAAA+AGG | + | chr1_3:29835672-29835691 | None:intergenic | 50.0% | |
| ! | AGCTGAACACCCTAGTTTGC+AGG | - | chr1_3:29836199-29836218 | Msa0113780:CDS | 50.0% |
| ACAGAAGCTGCTCAGGTGAA+AGG | + | chr1_3:29836888-29836907 | None:intergenic | 50.0% | |
| ACCTGAGCAGCTTCTGTTGA+AGG | - | chr1_3:29836891-29836910 | Msa0113780:intron | 50.0% | |
| GAAGGCCTCACAGAAGTTGA+TGG | - | chr1_3:29837135-29837154 | Msa0113780:intron | 50.0% | |
| CAGATCCCAGAGCATGGAAT+TGG | - | chr1_3:29837358-29837377 | Msa0113780:CDS | 50.0% | |
| TCCCGAGCATCTTTCTGTTG+CGG | - | chr1_3:29837400-29837419 | Msa0113780:intron | 50.0% | |
| TCCGCAACAGAAAGATGCTC+GGG | + | chr1_3:29837404-29837423 | None:intergenic | 50.0% | |
| TTGCGGAAAGGACAAAGCAC+TGG | - | chr1_3:29837417-29837436 | Msa0113780:intron | 50.0% | |
| GAACCTCAAGCTATGAAGCC+TGG | - | chr1_3:29837803-29837822 | Msa0113780:intron | 50.0% | |
| GAAGCTTCGCTTTGGTTACG+AGG | + | chr1_3:29838015-29838034 | None:intergenic | 50.0% | |
| !! | CATGGTGGTGGAACTACAGA+AGG | - | chr1_3:29838411-29838430 | Msa0113780:intron | 50.0% |
| ACCTTCTCTCGATTCCACCA+TGG | - | chr1_3:29833580-29833599 | Msa0113780:CDS | 50.0% | |
| ! | TCCATGGTGGAATCGAGAGA+AGG | + | chr1_3:29833584-29833603 | None:intergenic | 50.0% |
| TTTGAGCGAGGTGAGATCCA+TGG | + | chr1_3:29833600-29833619 | None:intergenic | 50.0% | |
| ATCGGAGATGAGTTTGAGCG+AGG | + | chr1_3:29833612-29833631 | None:intergenic | 50.0% | |
| TGTCAGTGTCGTGTCGTATC+CGG | + | chr1_3:29834190-29834209 | None:intergenic | 50.0% | |
| GTCGGATACCAGTGCAACAA+AGG | - | chr1_3:29834659-29834678 | Msa0113780:intron | 50.0% | |
| GAAGCCACTGATAGATGCTG+TGG | - | chr1_3:29834867-29834886 | Msa0113780:intron | 50.0% | |
| ! | TAAGTGATGGGGTGCAGTAG+TGG | - | chr1_3:29835556-29835575 | Msa0113780:CDS | 50.0% |
| CGTGACGATCCCTGCAAAAA+AGG | + | chr1_3:29835672-29835691 | None:intergenic | 50.0% | |
| ! | AGCTGAACACCCTAGTTTGC+AGG | - | chr1_3:29836199-29836218 | Msa0113780:CDS | 50.0% |
| ACAGAAGCTGCTCAGGTGAA+AGG | + | chr1_3:29836888-29836907 | None:intergenic | 50.0% | |
| ACCTGAGCAGCTTCTGTTGA+AGG | - | chr1_3:29836891-29836910 | Msa0113780:intron | 50.0% | |
| GAAGGCCTCACAGAAGTTGA+TGG | - | chr1_3:29837135-29837154 | Msa0113780:intron | 50.0% | |
| CAGATCCCAGAGCATGGAAT+TGG | - | chr1_3:29837358-29837377 | Msa0113780:CDS | 50.0% | |
| TCCCGAGCATCTTTCTGTTG+CGG | - | chr1_3:29837400-29837419 | Msa0113780:intron | 50.0% | |
| TCCGCAACAGAAAGATGCTC+GGG | + | chr1_3:29837404-29837423 | None:intergenic | 50.0% | |
| TTGCGGAAAGGACAAAGCAC+TGG | - | chr1_3:29837417-29837436 | Msa0113780:intron | 50.0% | |
| GAACCTCAAGCTATGAAGCC+TGG | - | chr1_3:29837803-29837822 | Msa0113780:intron | 50.0% | |
| GAAGCTTCGCTTTGGTTACG+AGG | + | chr1_3:29838015-29838034 | None:intergenic | 50.0% | |
| !! | CATGGTGGTGGAACTACAGA+AGG | - | chr1_3:29838411-29838430 | Msa0113780:intron | 50.0% |
| CGACACTGACACGTCAACAC+CGG | - | chr1_3:29834199-29834218 | Msa0113780:intron | 55.0% | |
| TGTGGCGGTCTTCTTCAGCA+TGG | - | chr1_3:29834892-29834911 | Msa0113780:intron | 55.0% | |
| GTGGCGGTCTTCTTCAGCAT+GGG | - | chr1_3:29834893-29834912 | Msa0113780:intron | 55.0% | |
| TGGCGGTCTTCTTCAGCATG+GGG | - | chr1_3:29834894-29834913 | Msa0113780:intron | 55.0% | |
| GCCTTCAACAGAAGCTGCTC+AGG | + | chr1_3:29836895-29836914 | None:intergenic | 55.0% | |
| TGATGACCGAGTGAGGATGC+AGG | - | chr1_3:29836929-29836948 | Msa0113780:intron | 55.0% | |
| CGACACTGACACGTCAACAC+CGG | - | chr1_3:29834199-29834218 | Msa0113780:intron | 55.0% | |
| TGTGGCGGTCTTCTTCAGCA+TGG | - | chr1_3:29834892-29834911 | Msa0113780:intron | 55.0% | |
| GTGGCGGTCTTCTTCAGCAT+GGG | - | chr1_3:29834893-29834912 | Msa0113780:intron | 55.0% | |
| TGGCGGTCTTCTTCAGCATG+GGG | - | chr1_3:29834894-29834913 | Msa0113780:intron | 55.0% | |
| GCCTTCAACAGAAGCTGCTC+AGG | + | chr1_3:29836895-29836914 | None:intergenic | 55.0% | |
| TGATGACCGAGTGAGGATGC+AGG | - | chr1_3:29836929-29836948 | Msa0113780:intron | 55.0% | |
| GAGCGAGGTGAGATCCATGG+TGG | + | chr1_3:29833597-29833616 | None:intergenic | 60.0% | |
| GGACACTGTCACGTCCACAC+TGG | - | chr1_3:29834108-29834127 | Msa0113780:intron | 60.0% | |
| TCTTTGGCTGTTCGCGGCTG+AGG | + | chr1_3:29834814-29834833 | None:intergenic | 60.0% | |
| TGACCGAGTGAGGATGCAGG+CGG | - | chr1_3:29836932-29836951 | Msa0113780:intron | 60.0% | |
| CAACCGCCTGCATCCTCACT+CGG | + | chr1_3:29836938-29836957 | None:intergenic | 60.0% | |
| GAGCGAGGTGAGATCCATGG+TGG | + | chr1_3:29833597-29833616 | None:intergenic | 60.0% | |
| GGACACTGTCACGTCCACAC+TGG | - | chr1_3:29834108-29834127 | Msa0113780:intron | 60.0% | |
| TCTTTGGCTGTTCGCGGCTG+AGG | + | chr1_3:29834814-29834833 | None:intergenic | 60.0% | |
| TGACCGAGTGAGGATGCAGG+CGG | - | chr1_3:29836932-29836951 | Msa0113780:intron | 60.0% | |
| CAACCGCCTGCATCCTCACT+CGG | + | chr1_3:29836938-29836957 | None:intergenic | 60.0% | |
| CTGTTCGCGGCTGAGGAGAC+TGG | + | chr1_3:29834807-29834826 | None:intergenic | 65.0% | |
| CTGTTCGCGGCTGAGGAGAC+TGG | + | chr1_3:29834807-29834826 | None:intergenic | 65.0% | |
| ! | GACAGAGACGGCGTGGGCTG+CGG | - | chr1_3:29836243-29836262 | Msa0113780:CDS | 70.0% |
| ! | ACAGAGACGGCGTGGGCTGC+GGG | - | chr1_3:29836244-29836263 | Msa0113780:CDS | 70.0% |
| ! | GACAGAGACGGCGTGGGCTG+CGG | - | chr1_3:29836243-29836262 | Msa0113780:CDS | 70.0% |
| ! | ACAGAGACGGCGTGGGCTGC+GGG | - | chr1_3:29836244-29836263 | Msa0113780:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 29833512 | 29839036 | 29833512 | ID=Msa0113780;Name=Msa0113780 |
| chr1_3 | mRNA | 29833512 | 29839036 | 29833512 | ID=Msa0113780-mRNA-1;Parent=Msa0113780;Name=Msa0113780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=87|0.8|0.72|1|1|1|11|0|587 |
| chr1_3 | exon | 29833512 | 29833700 | 29833512 | ID=Msa0113780-mRNA-1:exon:9926;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29834919 | 29834967 | 29834919 | ID=Msa0113780-mRNA-1:exon:9925;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29835038 | 29835187 | 29835038 | ID=Msa0113780-mRNA-1:exon:9924;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29835270 | 29835427 | 29835270 | ID=Msa0113780-mRNA-1:exon:9923;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29835484 | 29835647 | 29835484 | ID=Msa0113780-mRNA-1:exon:9922;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29835825 | 29836041 | 29835825 | ID=Msa0113780-mRNA-1:exon:9921;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29836186 | 29836413 | 29836186 | ID=Msa0113780-mRNA-1:exon:9920;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29836741 | 29836867 | 29836741 | ID=Msa0113780-mRNA-1:exon:9919;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29837232 | 29837413 | 29837232 | ID=Msa0113780-mRNA-1:exon:9918;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29837540 | 29837740 | 29837540 | ID=Msa0113780-mRNA-1:exon:9917;Parent=Msa0113780-mRNA-1 |
| chr1_3 | exon | 29838854 | 29839036 | 29838854 | ID=Msa0113780-mRNA-1:exon:9916;Parent=Msa0113780-mRNA-1 |
| chr1_3 | five_prime_UTR | 29838950 | 29839036 | 29838950 | ID=Msa0113780-mRNA-1:five_prime_utr;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29838854 | 29838949 | 29838854 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29837540 | 29837740 | 29837540 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29837232 | 29837413 | 29837232 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29836741 | 29836867 | 29836741 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29836186 | 29836413 | 29836186 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29835825 | 29836041 | 29835825 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29835484 | 29835647 | 29835484 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29835270 | 29835427 | 29835270 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29835038 | 29835187 | 29835038 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29834919 | 29834967 | 29834919 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| chr1_3 | CDS | 29833512 | 29833700 | 29833512 | ID=Msa0113780-mRNA-1:cds;Parent=Msa0113780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
