Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192580 | XP_039689049.1 | 97.196 | 642 | 18 | 0 | 29 | 670 | 1 | 642 | 0.0 | 1284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192580 | sp|F4J738|SAD2H_ARATH | 22.414 | 638 | 379 | 29 | 42 | 640 | 14 | 574 | 4.70e-13 | 76.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094800 | Msa1192580 | 0.865777 | 4.616129e-65 | -8.615850e-47 |
| Msa0113780 | Msa1192580 | 0.802438 | 5.610523e-49 | -8.615850e-47 |
| Msa0883720 | Msa1192580 | 0.814802 | 1.279857e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192580 | MtrunA17_Chr4g0069091 | 97.196 | 642 | 18 | 0 | 29 | 670 | 1 | 642 | 0.0 | 1284 |
| Msa1192580 | MtrunA17_Chr1g0213861 | 21.997 | 641 | 399 | 21 | 29 | 640 | 1 | 569 | 1.97e-15 | 80.5 |
| Msa1192580 | MtrunA17_Chr7g0221671 | 22.360 | 644 | 388 | 26 | 35 | 640 | 6 | 575 | 2.05e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192580 | AT3G17340.2 | 58.281 | 640 | 261 | 5 | 35 | 670 | 11 | 648 | 0.0 | 732 |
| Msa1192580 | AT3G17340.1 | 58.281 | 640 | 261 | 5 | 35 | 670 | 11 | 648 | 0.0 | 732 |
| Msa1192580 | AT3G59020.2 | 22.414 | 638 | 379 | 29 | 42 | 640 | 14 | 574 | 4.78e-14 | 76.6 |
| Msa1192580 | AT3G59020.1 | 22.414 | 638 | 379 | 29 | 42 | 640 | 14 | 574 | 5.34e-14 | 76.3 |
Find 177 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTTCTCAGACCCTTTC+AGG | 0.144240 | 8_1:-38450553 | Msa1192580:intron |
| TTTATCAGCCAAACGTAAAA+AGG | 0.185848 | 8_1:-38447819 | Msa1192580:CDS |
| GAATGTTAGCAAGGAGTTTA+AGG | 0.217005 | 8_1:-38450881 | Msa1192580:CDS |
| AAGCAACCAGCGCCGTTCTA+TGG | 0.256132 | 8_1:-38447780 | Msa1192580:CDS |
| CCTGTGCGGGTTTCTGCTGC+TGG | 0.267830 | 8_1:-38446653 | Msa1192580:CDS |
| CAAGGGCACGAGAATTTCTT+TGG | 0.270343 | 8_1:+38450086 | None:intergenic |
| TCAGCTTCTCACTTCAATTA+TGG | 0.272429 | 8_1:-38446433 | Msa1192580:CDS |
| TCATATATGGCAGTTACTTT+GGG | 0.299686 | 8_1:-38447146 | Msa1192580:intron |
| AGAGCACAATTTATAATATC+TGG | 0.301452 | 8_1:+38448864 | None:intergenic |
| TGTATATTCTCAATTGCTTA+TGG | 0.306590 | 8_1:-38446714 | Msa1192580:CDS |
| CAATGTTGCTAACTATTACT+TGG | 0.316604 | 8_1:+38446487 | None:intergenic |
| GTGTGAACGTTGGTGGCGTC+GGG | 0.319092 | 8_1:+38451151 | None:intergenic |
| ATCATATATGGCAGTTACTT+TGG | 0.322261 | 8_1:-38447147 | Msa1192580:intron |
| TGCAGATTCGGCACAAGTTC+CGG | 0.322757 | 8_1:+38450654 | None:intergenic |
| TGGCGTCGGGGCTGAGGGTT+TGG | 0.325331 | 8_1:+38451164 | None:intergenic |
| ACCGGCTCCTTCGGAACTTT+GGG | 0.325806 | 8_1:+38450132 | None:intergenic |
| GGGAGAGAATCCTCTCTAAA+AGG | 0.327040 | 8_1:+38448507 | None:intergenic |
| CGTTGGTGGCGTCGGGGCTG+AGG | 0.328761 | 8_1:+38451158 | None:intergenic |
| ACCTCATTGCTAGCGCAAAC+TGG | 0.333595 | 8_1:-38446915 | Msa1192580:CDS |
| TGGAGAAGGGGTAGAAAATC+AGG | 0.345138 | 8_1:+38446507 | None:intergenic |
| CTCACTTCAATTATGGAAGT+TGG | 0.358075 | 8_1:-38446426 | Msa1192580:CDS |
| GGTGTATTTCATCAATTTGT+TGG | 0.366527 | 8_1:-38450060 | Msa1192580:CDS |
| TTCTCATTCATTACCAATGC+TGG | 0.367696 | 8_1:+38448257 | None:intergenic |
| TACCGGCTCCTTCGGAACTT+TGG | 0.376762 | 8_1:+38450131 | None:intergenic |
| AAGAACAATAAGAGCATTGA+TGG | 0.379023 | 8_1:+38450578 | None:intergenic |
| CTTTGGATACGAGCTCCAAT+TGG | 0.386810 | 8_1:+38450103 | None:intergenic |
| ATGGGACGATGTGTGGGATA+TGG | 0.387245 | 8_1:+38446385 | None:intergenic |
| TTGTGGGTTCAGTCTCAAAA+TGG | 0.389428 | 8_1:-38446359 | Msa1192580:CDS |
| CAAGAAGTATCCTGCTTATC+CGG | 0.391536 | 8_1:+38446680 | None:intergenic |
| CTCTACTGAATTCGTTTAGT+AGG | 0.394398 | 8_1:-38449121 | Msa1192580:CDS |
| AAGATGTATATTTGACTAGA+TGG | 0.394680 | 8_1:-38449046 | Msa1192580:CDS |
| TGAATAGCAGATTGCAGATT+CGG | 0.400057 | 8_1:+38450642 | None:intergenic |
| GGTGTGAACGTTGGTGGCGT+CGG | 0.401130 | 8_1:+38451150 | None:intergenic |
| TGGGGTGGTACCGGCTCCTT+CGG | 0.406814 | 8_1:+38450123 | None:intergenic |
| ACGGTCGAGCTCGGCGGTGG+AGG | 0.408213 | 8_1:+38451129 | None:intergenic |
| CAGTCTGGAGCCTTGGCCTC+AGG | 0.411678 | 8_1:-38446328 | None:intergenic |
| TTTGGATACGAGCTCCAATT+GGG | 0.414683 | 8_1:+38450104 | None:intergenic |
| AAGATGCTGATGAGTATATA+CGG | 0.421687 | 8_1:-38448121 | Msa1192580:CDS |
| AGTAGAGGAGCTAGAGTTGA+TGG | 0.422542 | 8_1:+38449137 | None:intergenic |
| GGAGCCGGTACCACCCCAAT+TGG | 0.423828 | 8_1:-38450118 | Msa1192580:CDS |
| GGGGAAATTACCGGCGGAAA+TGG | 0.424520 | 8_1:+38451069 | None:intergenic |
| GTTGGTGGCGTCGGGGCTGA+GGG | 0.426656 | 8_1:+38451159 | None:intergenic |
| CTAGTTTCAGTCTAACGTAT+TGG | 0.431738 | 8_1:+38451269 | None:intergenic |
| CTGTGCGGGTTTCTGCTGCT+GGG | 0.438483 | 8_1:-38446652 | Msa1192580:CDS |
| TATATTCAGGATGAAATTTG+TGG | 0.442837 | 8_1:-38448015 | Msa1192580:intron |
| AGCAACCAGCGCCGTTCTAT+GGG | 0.447207 | 8_1:-38447779 | Msa1192580:CDS |
| TCAACTAAAATCTTGAGAAT+AGG | 0.450318 | 8_1:+38450823 | None:intergenic |
| GCTAGCGCAAACTGGGTACT+TGG | 0.450659 | 8_1:-38446907 | Msa1192580:CDS |
| TTTGGGGTACTGATGGCATA+TGG | 0.450672 | 8_1:-38447129 | Msa1192580:CDS |
| TGACAGAGCAGACATGGAAA+TGG | 0.452858 | 8_1:-38449940 | Msa1192580:CDS |
| ATTGATTATGCCGGATAAGC+AGG | 0.453612 | 8_1:-38446690 | Msa1192580:CDS |
| TTTCCATGTCTGCTCTGTCA+TGG | 0.455872 | 8_1:+38449943 | None:intergenic |
| TGATGTAATTTCAAATGTGC+TGG | 0.457343 | 8_1:-38448477 | Msa1192580:CDS |
| AGCTCCAATTGGGGTGGTAC+CGG | 0.462517 | 8_1:+38450114 | None:intergenic |
| GTGTCTGACCTCTGGTAGAC+AGG | 0.464473 | 8_1:+38446873 | None:intergenic |
| TACTTCTTGTTATCCTGTGC+GGG | 0.466682 | 8_1:-38446666 | Msa1192580:CDS |
| GAAATTCTCGTGCCCTTGCT+TGG | 0.467717 | 8_1:-38450081 | Msa1192580:CDS |
| TAACGTCCAGTCTGGAGCCT+TGG | 0.470061 | 8_1:-38446335 | Msa1192580:CDS |
| TATTTGACTAGATGGAAGTC+TGG | 0.471684 | 8_1:-38449038 | Msa1192580:CDS |
| ATTTCAAATGTGCTGGAGAC+TGG | 0.474308 | 8_1:-38448470 | Msa1192580:CDS |
| AATCCACGGCAGCAACAATT+CGG | 0.474353 | 8_1:+38450697 | None:intergenic |
| CAAGTAATAGTTAGCAACAT+TGG | 0.474445 | 8_1:-38446486 | Msa1192580:CDS |
| GAGACGGTCGAGCTCGGCGG+TGG | 0.478885 | 8_1:+38451126 | None:intergenic |
| CACATCGTCCCATCTCTTGT+GGG | 0.479373 | 8_1:-38446375 | Msa1192580:CDS |
| GAGACTGAACCCACAAGAGA+TGG | 0.481151 | 8_1:+38446366 | None:intergenic |
| TGGAAATTCGCGGTGTTGCT+CGG | 0.485040 | 8_1:+38451221 | None:intergenic |
| TTTGGCTGATAAACTGTCAA+TGG | 0.487883 | 8_1:+38447829 | None:intergenic |
| CATGTTGGAATCAGAAGGAA+TGG | 0.491369 | 8_1:+38447721 | None:intergenic |
| GTTCCGAATTGTTGCTGCCG+TGG | 0.491398 | 8_1:-38450700 | Msa1192580:CDS |
| ATCTGCAATCTTCCCAGCAT+TGG | 0.491649 | 8_1:-38448270 | Msa1192580:CDS |
| TTAGAGAGGATTCTCTCCCT+AGG | 0.491861 | 8_1:-38448503 | Msa1192580:CDS |
| GCTTATGGCATTGATTATGC+CGG | 0.492311 | 8_1:-38446699 | Msa1192580:CDS |
| TGTATAGGACATGTCAGATT+GGG | 0.493213 | 8_1:-38448147 | Msa1192580:intron |
| TGGTGTTATTTCAATGTCAA+AGG | 0.494392 | 8_1:-38447944 | Msa1192580:intron |
| GGCTGAGGGTTTGGTTGAGA+AGG | 0.494636 | 8_1:+38451173 | None:intergenic |
| ATTTCATCAATTTGTTGGAA+AGG | 0.495585 | 8_1:-38450055 | Msa1192580:intron |
| TTGAAATTACATCAAAACCT+AGG | 0.495804 | 8_1:+38448486 | None:intergenic |
| ACACATCGTCCCATCTCTTG+TGG | 0.496692 | 8_1:-38446376 | Msa1192580:CDS |
| TGAAATTTGTGGATGGAGGG+AGG | 0.496969 | 8_1:-38448004 | Msa1192580:CDS |
| AAAATGGCTAACGTCCAGTC+TGG | 0.497193 | 8_1:-38446343 | Msa1192580:CDS |
| CTGAGGCCAAGGCTCCAGAC+TGG | 0.497684 | 8_1:+38446329 | None:intergenic |
| TCTACTGAATTCGTTTAGTA+GGG | 0.500516 | 8_1:-38449120 | Msa1192580:CDS |
| GTCTAACGTATTGGCGGGAA+GGG | 0.501333 | 8_1:+38451278 | None:intergenic |
| TGCTAACTATTACTTGGAGA+AGG | 0.503788 | 8_1:+38446493 | None:intergenic |
| AGGAGATGGAAAGGGAAGTG+AGG | 0.504262 | 8_1:+38451094 | None:intergenic |
| GCATTTGCATATTGTGAGGA+TGG | 0.504304 | 8_1:+38449911 | None:intergenic |
| CGGCGGAAATGGAGAGGAGA+TGG | 0.505405 | 8_1:+38451080 | None:intergenic |
| AAATGGAGAGGAGATGGAAA+GGG | 0.510970 | 8_1:+38451086 | None:intergenic |
| AGGATGAAATTTGTGGATGG+AGG | 0.517304 | 8_1:-38448008 | Msa1192580:CDS |
| GACGGAGAGACGGTCGAGCT+CGG | 0.517469 | 8_1:+38451120 | None:intergenic |
| GCTAACTATTACTTGGAGAA+GGG | 0.519103 | 8_1:+38446494 | None:intergenic |
| TGAAATTACATCAAAACCTA+GGG | 0.519223 | 8_1:+38448487 | None:intergenic |
| AGTGAGAAGCTGAAATAAGA+TGG | 0.520318 | 8_1:+38446443 | None:intergenic |
| ATGTATAGGACATGTCAGAT+TGG | 0.520551 | 8_1:-38448148 | Msa1192580:intron |
| CAATACGTTAGACTGAAACT+AGG | 0.523147 | 8_1:-38451268 | Msa1192580:CDS |
| CCTCATTGCTAGCGCAAACT+GGG | 0.526833 | 8_1:-38446914 | Msa1192580:CDS |
| AACATTCGAAGGTGTGGCGC+CGG | 0.529745 | 8_1:+38450897 | None:intergenic |
| TTCAATTATGGAAGTTGGAG+AGG | 0.536320 | 8_1:-38446421 | Msa1192580:CDS |
| CGCCGCAATGTTGATATCAC+CGG | 0.536536 | 8_1:-38450916 | Msa1192580:CDS |
| TCAACAGGAGGTGAAAATCA+AGG | 0.536898 | 8_1:-38450979 | Msa1192580:intron |
| TCTCATTCATTACCAATGCT+GGG | 0.537036 | 8_1:+38448258 | None:intergenic |
| AGCAACACCGCGAATTTCCA+TGG | 0.537669 | 8_1:-38451218 | Msa1192580:CDS |
| CAGTTACTTTGGGGTACTGA+TGG | 0.538531 | 8_1:-38447136 | Msa1192580:CDS |
| CATTACTTACTGCGAAATGT+AGG | 0.538556 | 8_1:+38449889 | None:intergenic |
| TTTCAGTCTAACGTATTGGC+GGG | 0.540297 | 8_1:+38451273 | None:intergenic |
| TCCAATAGAGTTGTAAAATG+TGG | 0.541694 | 8_1:+38448293 | None:intergenic |
| TGTGAAACATAGTTTATGGC+CGG | 0.542404 | 8_1:-38450673 | Msa1192580:CDS |
| TCAACACACACCTGAGGCCA+AGG | 0.542867 | 8_1:+38446318 | None:intergenic |
| AACTGGGTACTTGGAGAACT+AGG | 0.542910 | 8_1:-38446898 | Msa1192580:CDS |
| AATACGTTAGACTGAAACTA+GGG | 0.543715 | 8_1:-38451267 | Msa1192580:CDS |
| CATCTCCTCTCCATTTCCGC+CGG | 0.544957 | 8_1:-38451079 | Msa1192580:intron |
| GGTGGAGGTGTGAACGTTGG+TGG | 0.547293 | 8_1:+38451144 | None:intergenic |
| AACTCCTTGCTAACATTCGA+AGG | 0.548924 | 8_1:+38450886 | None:intergenic |
| GTTTCAGTCTAACGTATTGG+CGG | 0.549607 | 8_1:+38451272 | None:intergenic |
| TTCAATTAACACAGGGATGG+AGG | 0.549854 | 8_1:-38448325 | Msa1192580:intron |
| TCGATGGTTCAAACTCTACA+TGG | 0.550475 | 8_1:-38450605 | Msa1192580:CDS |
| GGATGAAATTTGTGGATGGA+GGG | 0.551554 | 8_1:-38448007 | Msa1192580:CDS |
| AAAAGTGCAGTAAACTTGCT+TGG | 0.553241 | 8_1:-38447964 | Msa1192580:CDS |
| ACAAGAGATGGGACGATGTG+TGG | 0.553250 | 8_1:+38446378 | None:intergenic |
| CTTCCCTCGTCACACGGCAT+AGG | 0.554422 | 8_1:-38448992 | Msa1192580:CDS |
| TGAGACATGTTGGAATCAGA+AGG | 0.558531 | 8_1:+38447716 | None:intergenic |
| TGTGCGGGTTTCTGCTGCTG+GGG | 0.558804 | 8_1:-38446651 | Msa1192580:CDS |
| CATGTTCATACTATATCTGA+AGG | 0.559424 | 8_1:+38448089 | None:intergenic |
| AGTCTAACGTATTGGCGGGA+AGG | 0.559478 | 8_1:+38451277 | None:intergenic |
| CAGAATAGTCATCTTATCGA+TGG | 0.563352 | 8_1:-38450621 | Msa1192580:CDS |
| ATACTTCTTGTTATCCTGTG+CGG | 0.565303 | 8_1:-38446667 | Msa1192580:CDS |
| TTGATGAAATACACCAAGCA+AGG | 0.568054 | 8_1:+38450068 | None:intergenic |
| TCCCAAAGTTCCGAAGGAGC+CGG | 0.568551 | 8_1:-38450133 | Msa1192580:CDS |
| GGCGGTGGAGGTGTGAACGT+TGG | 0.576113 | 8_1:+38451141 | None:intergenic |
| TGCTCTGTCATGGTTCGCTA+CGG | 0.578713 | 8_1:+38449953 | None:intergenic |
| TCAATGGAAGTCTCCATTGG+TGG | 0.580383 | 8_1:+38447845 | None:intergenic |
| AGAATCCTCTCTAAAAGGAA+AGG | 0.581742 | 8_1:+38448512 | None:intergenic |
| GAAATGGAGAGGAGATGGAA+AGG | 0.583102 | 8_1:+38451085 | None:intergenic |
| CTTGCTAACATTCGAAGGTG+TGG | 0.583712 | 8_1:+38450891 | None:intergenic |
| GTTTCCTATGCCGTGTGACG+AGG | 0.585976 | 8_1:+38448988 | None:intergenic |
| AGACTGAACCCACAAGAGAT+GGG | 0.586000 | 8_1:+38446367 | None:intergenic |
| TTCAGGATGAAATTTGTGGA+TGG | 0.586043 | 8_1:-38448011 | Msa1192580:intron |
| AGTGAGGAGCGACGGAGAGA+CGG | 0.586825 | 8_1:+38451110 | None:intergenic |
| TTTGAATCCCAAAGTTCCGA+AGG | 0.587938 | 8_1:-38450139 | Msa1192580:CDS |
| CCAGCAGCAGAAACCCGCAC+AGG | 0.588649 | 8_1:+38446653 | None:intergenic |
| CTGTCAATGGAAGTCTCCAT+TGG | 0.590095 | 8_1:+38447842 | None:intergenic |
| GAAAGGGAAGTGAGGAGCGA+CGG | 0.593521 | 8_1:+38451102 | None:intergenic |
| CAAGAGATGGGACGATGTGT+GGG | 0.595039 | 8_1:+38446379 | None:intergenic |
| ATGTTGGAATCAGAAGGAAT+GGG | 0.596110 | 8_1:+38447722 | None:intergenic |
| CATATATGGCAGTTACTTTG+GGG | 0.601229 | 8_1:-38447145 | Msa1192580:intron |
| CTAACTATTACTTGGAGAAG+GGG | 0.602486 | 8_1:+38446495 | None:intergenic |
| CAACCAGCGCCGTTCTATGG+GGG | 0.607565 | 8_1:-38447777 | Msa1192580:CDS |
| GGGGTACTGATGGCATATGG+TGG | 0.607880 | 8_1:-38447126 | Msa1192580:CDS |
| GAGAAGGGGTAGAAAATCAG+GGG | 0.609077 | 8_1:+38446509 | None:intergenic |
| GGAGAAGGGGTAGAAAATCA+GGG | 0.613689 | 8_1:+38446508 | None:intergenic |
| TAACAATGCTCATTCGAACA+CGG | 0.614541 | 8_1:-38446975 | Msa1192580:CDS |
| GAACCATGACAGAGCAGACA+TGG | 0.616303 | 8_1:-38449946 | Msa1192580:CDS |
| AGCTAGAGTTGATGGCATGT+AGG | 0.616932 | 8_1:+38449145 | None:intergenic |
| TTTCCTATGCCGTGTGACGA+GGG | 0.617633 | 8_1:+38448989 | None:intergenic |
| CGCCGGTGATATCAACATTG+CGG | 0.619290 | 8_1:+38450914 | None:intergenic |
| ATCTCCGCCATGGAAATTCG+CGG | 0.620073 | 8_1:+38451211 | None:intergenic |
| CACACCTTCGAATGTTAGCA+AGG | 0.623375 | 8_1:-38450890 | Msa1192580:CDS |
| CCCAGTTTGCGCTAGCAATG+AGG | 0.625087 | 8_1:+38446914 | None:intergenic |
| GTGTGGTACAGAAACAGCTA+TGG | 0.626514 | 8_1:+38446936 | None:intergenic |
| TTGGATACGAGCTCCAATTG+GGG | 0.629397 | 8_1:+38450105 | None:intergenic |
| AATTACCGGCGGAAATGGAG+AGG | 0.633426 | 8_1:+38451074 | None:intergenic |
| CTACTAAACGAATTCAGTAG+AGG | 0.633526 | 8_1:+38449122 | None:intergenic |
| ACTATGTTTCACAAAATCCA+CGG | 0.637699 | 8_1:+38450683 | None:intergenic |
| TGTGAACGTTGGTGGCGTCG+GGG | 0.637949 | 8_1:+38451152 | None:intergenic |
| GATACGAGCTCCAATTGGGG+TGG | 0.640240 | 8_1:+38450108 | None:intergenic |
| GCAACCAGCGCCGTTCTATG+GGG | 0.641275 | 8_1:-38447778 | Msa1192580:CDS |
| TGATGAAATACACCAAGCAA+GGG | 0.657773 | 8_1:+38450069 | None:intergenic |
| AGCATTGGTAATGAATGAGA+AGG | 0.663030 | 8_1:-38448255 | Msa1192580:intron |
| GATGAGAGTAATCTCCGCCA+TGG | 0.663669 | 8_1:+38451201 | None:intergenic |
| GGAGAGACGGTCGAGCTCGG+CGG | 0.677569 | 8_1:+38451123 | None:intergenic |
| GGCATATGGTGGTCTGCAAG+AGG | 0.685318 | 8_1:-38447115 | Msa1192580:intron |
| ACTAGGCTCCTGTCTACCAG+AGG | 0.694654 | 8_1:-38446881 | Msa1192580:intron |
| GAAACAGCTATGGTATACAG+TGG | 0.713847 | 8_1:+38446946 | None:intergenic |
| TTTGCGCTAGCAATGAGGTG+TGG | 0.715406 | 8_1:+38446919 | None:intergenic |
| GTAGGCATTTGCATATTGTG+AGG | 0.716268 | 8_1:+38449907 | None:intergenic |
| AGAAGGGGTAGAAAATCAGG+GGG | 0.766386 | 8_1:+38446510 | None:intergenic |
| AACACCGCGAATTTCCATGG+CGG | 0.788061 | 8_1:-38451215 | Msa1192580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTCTAATTTTAGT+TGG | - | chr8_1:38446837-38446856 | Msa1192580:intron | 10.0% |
| !! | AATAATTGAATAATATTGTT+TGG | + | chr8_1:38447781-38447800 | None:intergenic | 10.0% |
| !! | TTAATTGCAAAAAAAAAATT+TGG | - | chr8_1:38449978-38449997 | Msa1192580:intron | 10.0% |
| !!! | AAAAAATTTGGATTTTTTTA+TGG | - | chr8_1:38449990-38450009 | Msa1192580:intron | 10.0% |
| !! | TTTCATCTACATATAATTTA+AGG | + | chr8_1:38448179-38448198 | None:intergenic | 15.0% |
| !! | TTAAAAAACGTCATTAATAA+TGG | + | chr8_1:38448409-38448428 | None:intergenic | 15.0% |
| !! | TAAAATTTAAGTAACTTACA+GGG | + | chr8_1:38449168-38449187 | None:intergenic | 15.0% |
| !! | ATAAAATTTAAGTAACTTAC+AGG | + | chr8_1:38449169-38449188 | None:intergenic | 15.0% |
| !! | TAAAAAATGAACAAAGAAAT+TGG | + | chr8_1:38450052-38450071 | None:intergenic | 15.0% |
| !! | TAAATTCAATTGACTAAATA+GGG | + | chr8_1:38450160-38450179 | None:intergenic | 15.0% |
| !! | ATAAATTCAATTGACTAAAT+AGG | + | chr8_1:38450161-38450180 | None:intergenic | 15.0% |
| !! | AACTAATATATACATGAATA+AGG | + | chr8_1:38450395-38450414 | None:intergenic | 15.0% |
| !!! | ATTTTGTGAAACATAGTTTA+TGG | - | chr8_1:38446935-38446954 | Msa1192580:CDS | 20.0% |
| !! | GCAAAAACTCAAAAAAAAAA+GGG | + | chr8_1:38447934-38447953 | None:intergenic | 20.0% |
| !! | TGCAAAAACTCAAAAAAAAA+AGG | + | chr8_1:38447935-38447954 | None:intergenic | 20.0% |
| !!! | GAAAGATGATTTTTAAACTA+TGG | - | chr8_1:38447988-38448007 | Msa1192580:CDS | 20.0% |
| !!! | ATTTGTTAGAGAAAAGAAAA+CGG | + | chr8_1:38448099-38448118 | None:intergenic | 20.0% |
| !!! | AAGTATATTCGTTTGAATTT+TGG | + | chr8_1:38448895-38448914 | None:intergenic | 20.0% |
| !!! | ACTTGTATTAATTTTCTACA+CGG | - | chr8_1:38448955-38448974 | Msa1192580:intron | 20.0% |
| !!! | GTTATTTTTCAATTAACACA+GGG | - | chr8_1:38449280-38449299 | Msa1192580:intron | 20.0% |
| !!! | TTTTTTGCAATTAATTGATC+AGG | + | chr8_1:38449972-38449991 | None:intergenic | 20.0% |
| !!! | AACTGATTCAAAAACATATA+GGG | + | chr8_1:38450120-38450139 | None:intergenic | 20.0% |
| !!! | AAACTGATTCAAAAACATAT+AGG | + | chr8_1:38450121-38450140 | None:intergenic | 20.0% |
| ! | GTAGTTAGAGAAAAATGAAT+CGG | + | chr8_1:38446588-38446607 | None:intergenic | 25.0% |
| ! | TCAACTAAAATCTTGAGAAT+AGG | + | chr8_1:38446792-38446811 | None:intergenic | 25.0% |
| !!! | TGAATTTTGATTACCTGAAA+GGG | + | chr8_1:38447075-38447094 | None:intergenic | 25.0% |
| ! | AATCTTCGTATACTATAGTA+AGG | - | chr8_1:38447207-38447226 | Msa1192580:intron | 25.0% |
| ! | TGTTGTTATAGAGATCATAA+TGG | - | chr8_1:38447405-38447424 | Msa1192580:intron | 25.0% |
| ! | GTTGTTATAGAGATCATAAT+GGG | - | chr8_1:38447406-38447425 | Msa1192580:intron | 25.0% |
| ! | TTGTTATAGAGATCATAATG+GGG | - | chr8_1:38447407-38447426 | Msa1192580:intron | 25.0% |
| !! | AGAAGTGCATTTAAGATAAA+AGG | + | chr8_1:38447440-38447459 | None:intergenic | 25.0% |
| !!! | ATTTCATCAATTTGTTGGAA+AGG | - | chr8_1:38447557-38447576 | Msa1192580:intron | 25.0% |
| !!! | AGGTACTGTGTTTTTTTTTT+TGG | - | chr8_1:38447577-38447596 | Msa1192580:intron | 25.0% |
| !! | TTATTATGTGTTATTGAGCT+AGG | + | chr8_1:38448075-38448094 | None:intergenic | 25.0% |
| ! | ATATGTAGATGAAATTGAGA+TGG | - | chr8_1:38448185-38448204 | Msa1192580:intron | 25.0% |
| ! | AATACCAAAAGTGGAATAAA+AGG | + | chr8_1:38448311-38448330 | None:intergenic | 25.0% |
| ! | AAGATGTATATTTGACTAGA+TGG | - | chr8_1:38448566-38448585 | Msa1192580:intron | 25.0% |
| ! | AGAGCACAATTTATAATATC+TGG | + | chr8_1:38448751-38448770 | None:intergenic | 25.0% |
| ! | TTAAGAATATTATCTTACGC+TGG | + | chr8_1:38448800-38448819 | None:intergenic | 25.0% |
| ! | AAGTGGTTAGCAAATAAAAA+TGG | + | chr8_1:38448939-38448958 | None:intergenic | 25.0% |
| ! | GTGTAGAAAATTAATACAAG+TGG | + | chr8_1:38448956-38448975 | None:intergenic | 25.0% |
| ! | TGAAATTACATCAAAACCTA+GGG | + | chr8_1:38449128-38449147 | None:intergenic | 25.0% |
| ! | TTGAAATTACATCAAAACCT+AGG | + | chr8_1:38449129-38449148 | None:intergenic | 25.0% |
| ! | TAATTACAGTTTCAATTGCA+AGG | - | chr8_1:38449207-38449226 | Msa1192580:intron | 25.0% |
| !!! | CGTTATTTTTCAATTAACAC+AGG | - | chr8_1:38449279-38449298 | Msa1192580:intron | 25.0% |
| !!! | TTTTATTTCGTAGAAGTAAC+AGG | - | chr8_1:38449385-38449404 | Msa1192580:intron | 25.0% |
| ! | TTTATTTCGTAGAAGTAACA+GGG | - | chr8_1:38449386-38449405 | Msa1192580:intron | 25.0% |
| !!! | CTTTTGGAAATGTAATGTAT+AGG | - | chr8_1:38449450-38449469 | Msa1192580:intron | 25.0% |
| ! | TATATTCAGGATGAAATTTG+TGG | - | chr8_1:38449597-38449616 | Msa1192580:intron | 25.0% |
| !! | ATGTGGTCATTAATTTTTGT+AGG | - | chr8_1:38449742-38449761 | Msa1192580:intron | 25.0% |
| !! | TGTGGTCATTAATTTTTGTA+GGG | - | chr8_1:38449743-38449762 | Msa1192580:intron | 25.0% |
| ! | ATGGGAAATTTAGACAAAAA+AGG | + | chr8_1:38449875-38449894 | None:intergenic | 25.0% |
| ! | ACATAAAAACTCACTCATTT+AGG | + | chr8_1:38449931-38449950 | None:intergenic | 25.0% |
| ! | GATATATATAGGCATCAAAT+GGG | + | chr8_1:38450200-38450219 | None:intergenic | 25.0% |
| ! | AGATATATATAGGCATCAAA+TGG | + | chr8_1:38450201-38450220 | None:intergenic | 25.0% |
| ! | AAGAAAAGCAGAAAATGAAA+AGG | + | chr8_1:38450326-38450345 | None:intergenic | 25.0% |
| ! | ATGATACTAACATTAAGTAC+AGG | + | chr8_1:38450360-38450379 | None:intergenic | 25.0% |
| !! | ATGATGATGTAACAAGAATA+AGG | + | chr8_1:38450450-38450469 | None:intergenic | 25.0% |
| ! | TCTTGTTACATCATCATATA+TGG | - | chr8_1:38450453-38450472 | Msa1192580:intron | 25.0% |
| !! | GTTTTACCTTTTGTTGAAAA+AGG | - | chr8_1:38450527-38450546 | Msa1192580:intron | 25.0% |
| !!! | TTTTTGAAAGATCAAGAATC+TGG | - | chr8_1:38450609-38450628 | Msa1192580:CDS | 25.0% |
| !!! | CAAGCAAATTTTGTTTGATA+TGG | - | chr8_1:38450784-38450803 | Msa1192580:intron | 25.0% |
| ! | TGTATATTCTCAATTGCTTA+TGG | - | chr8_1:38450898-38450917 | Msa1192580:CDS | 25.0% |
| AATACGTTAGACTGAAACTA+GGG | - | chr8_1:38446345-38446364 | Msa1192580:CDS | 30.0% | |
| !!! | TCTCAAGATTTTAGTTGAAG+TGG | - | chr8_1:38446794-38446813 | Msa1192580:intron | 30.0% |
| ACTATGTTTCACAAAATCCA+CGG | + | chr8_1:38446932-38446951 | None:intergenic | 30.0% | |
| !! | AAGAACAATAAGAGCATTGA+TGG | + | chr8_1:38447037-38447056 | None:intergenic | 30.0% |
| !!! | GTGAATTTTGATTACCTGAA+AGG | + | chr8_1:38447076-38447095 | None:intergenic | 30.0% |
| AGGTAATCAAAATTCACAGT+CGG | - | chr8_1:38447079-38447098 | Msa1192580:intron | 30.0% | |
| !! | AGTTCTAGAGATTAATGAGT+TGG | - | chr8_1:38447298-38447317 | Msa1192580:intron | 30.0% |
| ! | TAATGAGTTGGATCGAAATT+TGG | - | chr8_1:38447310-38447329 | Msa1192580:intron | 30.0% |
| GGTGTATTTCATCAATTTGT+TGG | - | chr8_1:38447552-38447571 | Msa1192580:intron | 30.0% | |
| ! | TTTTGCTCATCAGCTTAAAT+TGG | - | chr8_1:38447879-38447898 | Msa1192580:intron | 30.0% |
| TGACCATTTATGATTAGAAC+AGG | - | chr8_1:38448213-38448232 | Msa1192580:intron | 30.0% | |
| GACCATTTATGATTAGAACA+GGG | - | chr8_1:38448214-38448233 | Msa1192580:intron | 30.0% | |
| ACAACAATAAGAAATCACCA+AGG | + | chr8_1:38448261-38448280 | None:intergenic | 30.0% | |
| AAAAGGTTACACTATCTGAA+AGG | + | chr8_1:38448294-38448313 | None:intergenic | 30.0% | |
| ! | GTAACCTTTTATTCCACTTT+TGG | - | chr8_1:38448304-38448323 | Msa1192580:CDS | 30.0% |
| CATGAACTAAATACCAAAAG+TGG | + | chr8_1:38448320-38448339 | None:intergenic | 30.0% | |
| ATAAAGACCATAAACTCAGA+TGG | + | chr8_1:38448367-38448386 | None:intergenic | 30.0% | |
| TCTACTGAATTCGTTTAGTA+GGG | - | chr8_1:38448492-38448511 | Msa1192580:CDS | 30.0% | |
| !! | CTTAATAACCGATTTGTTGT+TGG | - | chr8_1:38448827-38448846 | Msa1192580:intron | 30.0% |
| TATTCAAGCCAACAACAAAT+CGG | + | chr8_1:38448838-38448857 | None:intergenic | 30.0% | |
| !! | TTTGTTGTTGGCTTGAATAA+TGG | - | chr8_1:38448839-38448858 | Msa1192580:CDS | 30.0% |
| TGATGTAATTTCAAATGTGC+TGG | - | chr8_1:38449135-38449154 | Msa1192580:CDS | 30.0% | |
| !! | TTTTTCAATTAACACAGGGA+TGG | - | chr8_1:38449284-38449303 | Msa1192580:intron | 30.0% |
| ! | TCCACATTTTACAACTCTAT+TGG | - | chr8_1:38449318-38449337 | Msa1192580:intron | 30.0% |
| TCCAATAGAGTTGTAAAATG+TGG | + | chr8_1:38449322-38449341 | None:intergenic | 30.0% | |
| CAAAAGACATTAATGAGAAC+GGG | + | chr8_1:38449436-38449455 | None:intergenic | 30.0% | |
| CCAAAAGACATTAATGAGAA+CGG | + | chr8_1:38449437-38449456 | None:intergenic | 30.0% | |
| AAGATGCTGATGAGTATATA+CGG | - | chr8_1:38449491-38449510 | Msa1192580:intron | 30.0% | |
| CATGTTCATACTATATCTGA+AGG | + | chr8_1:38449526-38449545 | None:intergenic | 30.0% | |
| AAATTGTAGTGATTTCTGAC+TGG | - | chr8_1:38449569-38449588 | Msa1192580:intron | 30.0% | |
| ! | CTGACTGGAATTTTATATTC+AGG | - | chr8_1:38449584-38449603 | Msa1192580:intron | 30.0% |
| !! | TGGTGTTATTTCAATGTCAA+AGG | - | chr8_1:38449668-38449687 | Msa1192580:intron | 30.0% |
| ! | GTGGTCATTAATTTTTGTAG+GGG | - | chr8_1:38449744-38449763 | Msa1192580:intron | 30.0% |
| TTTATCAGCCAAACGTAAAA+AGG | - | chr8_1:38449793-38449812 | Msa1192580:intron | 30.0% | |
| TTATCAGCCAAACGTAAAAA+GGG | - | chr8_1:38449794-38449813 | Msa1192580:intron | 30.0% | |
| TGATGCCTATATATATCTTG+CGG | - | chr8_1:38450203-38450222 | Msa1192580:intron | 30.0% | |
| ! | TTTAAAGTGTTCCTGATTGA+AGG | - | chr8_1:38450250-38450269 | Msa1192580:intron | 30.0% |
| ! | TTAAAGTGTTCCTGATTGAA+GGG | - | chr8_1:38450251-38450270 | Msa1192580:intron | 30.0% |
| ATACTAACATTAAGTACAGG+AGG | + | chr8_1:38450357-38450376 | None:intergenic | 30.0% | |
| ATCATATATGGCAGTTACTT+TGG | - | chr8_1:38450465-38450484 | Msa1192580:intron | 30.0% | |
| ! | TCATATATGGCAGTTACTTT+GGG | - | chr8_1:38450466-38450485 | Msa1192580:intron | 30.0% |
| !!! | CTTAAGCCTTTTTCAACAAA+AGG | + | chr8_1:38450536-38450555 | None:intergenic | 30.0% |
| GTGATATAATCGTGAAAACT+TGG | - | chr8_1:38450835-38450854 | Msa1192580:CDS | 30.0% | |
| ACGTTCTATTGACAAAATCA+GGG | + | chr8_1:38451021-38451040 | None:intergenic | 30.0% | |
| AACGTTCTATTGACAAAATC+AGG | + | chr8_1:38451022-38451041 | None:intergenic | 30.0% | |
| CAATGTTGCTAACTATTACT+TGG | + | chr8_1:38451128-38451147 | None:intergenic | 30.0% | |
| CAAGTAATAGTTAGCAACAT+TGG | - | chr8_1:38451126-38451145 | Msa1192580:CDS | 30.0% | |
| CTAGTTTCAGTCTAACGTAT+TGG | + | chr8_1:38446346-38446365 | None:intergenic | 35.0% | |
| CAATACGTTAGACTGAAACT+AGG | - | chr8_1:38446344-38446363 | Msa1192580:CDS | 35.0% | |
| TGAAGAATTGGGGAAATTAC+CGG | + | chr8_1:38446555-38446574 | None:intergenic | 35.0% | |
| GTTAGAGAAAAATGAATCGG+AGG | + | chr8_1:38446585-38446604 | None:intergenic | 35.0% | |
| TCGTATTCTCAATTCTCAAC+AGG | - | chr8_1:38446618-38446637 | Msa1192580:intron | 35.0% | |
| TATTCTCAATTCTCAACAGG+AGG | - | chr8_1:38446621-38446640 | Msa1192580:intron | 35.0% | |
| GAATGTTAGCAAGGAGTTTA+AGG | - | chr8_1:38446731-38446750 | Msa1192580:CDS | 35.0% | |
| !! | TATTCTGCGATTTTTCGATG+TGG | - | chr8_1:38446887-38446906 | Msa1192580:CDS | 35.0% |
| TGTGAAACATAGTTTATGGC+CGG | - | chr8_1:38446939-38446958 | Msa1192580:CDS | 35.0% | |
| TGAATAGCAGATTGCAGATT+CGG | + | chr8_1:38446973-38446992 | None:intergenic | 35.0% | |
| CAGAATAGTCATCTTATCGA+TGG | - | chr8_1:38446991-38447010 | Msa1192580:CDS | 35.0% | |
| TAATCAAAATTCACAGTCGG+TGG | - | chr8_1:38447082-38447101 | Msa1192580:intron | 35.0% | |
| AAGGAGAGTAGATCAAATTG+AGG | - | chr8_1:38447226-38447245 | Msa1192580:intron | 35.0% | |
| AGGAGAGTAGATCAAATTGA+GGG | - | chr8_1:38447227-38447246 | Msa1192580:intron | 35.0% | |
| TGATGAAATACACCAAGCAA+GGG | + | chr8_1:38447546-38447565 | None:intergenic | 35.0% | |
| TTGATGAAATACACCAAGCA+AGG | + | chr8_1:38447547-38447566 | None:intergenic | 35.0% | |
| ! | GATTTTATGATGCATGAGTC+AGG | - | chr8_1:38447636-38447655 | Msa1192580:intron | 35.0% |
| CATTACTTACTGCGAAATGT+AGG | + | chr8_1:38447726-38447745 | None:intergenic | 35.0% | |
| CTACATTTCGCAGTAAGTAA+TGG | - | chr8_1:38447724-38447743 | Msa1192580:CDS | 35.0% | |
| TCCTGATGTTTATACACTTG+TGG | - | chr8_1:38447812-38447831 | Msa1192580:CDS | 35.0% | |
| TCCACAAGTGTATAAACATC+AGG | + | chr8_1:38447816-38447835 | None:intergenic | 35.0% | |
| ATCTTTCAAAAGCAACTCTG+CGG | + | chr8_1:38447975-38447994 | None:intergenic | 35.0% | |
| GTAGATGAAATTGAGATGGA+AGG | - | chr8_1:38448189-38448208 | Msa1192580:intron | 35.0% | |
| GACCCTGTTCTAATCATAAA+TGG | + | chr8_1:38448219-38448238 | None:intergenic | 35.0% | |
| TTAGTTCATGAGTGTATGCA+TGG | - | chr8_1:38448330-38448349 | Msa1192580:intron | 35.0% | |
| AATCTGACATTCCTACTTAC+AGG | - | chr8_1:38448438-38448457 | Msa1192580:intron | 35.0% | |
| CTACTAAACGAATTCAGTAG+AGG | + | chr8_1:38448493-38448512 | None:intergenic | 35.0% | |
| CTCTACTGAATTCGTTTAGT+AGG | - | chr8_1:38448491-38448510 | Msa1192580:CDS | 35.0% | |
| TATTTGACTAGATGGAAGTC+TGG | - | chr8_1:38448574-38448593 | Msa1192580:intron | 35.0% | |
| ! | AATATATCCCCTCCATTTTC+AGG | - | chr8_1:38448719-38448738 | Msa1192580:intron | 35.0% |
| !! | TGCTTGTTATTTCCAGTACT+TGG | - | chr8_1:38448865-38448884 | Msa1192580:CDS | 35.0% |
| !! | AATTTTGGTAGTCCAAGTAC+TGG | + | chr8_1:38448880-38448899 | None:intergenic | 35.0% |
| ACGAATATACTTCCTTTAGC+TGG | - | chr8_1:38448903-38448922 | Msa1192580:intron | 35.0% | |
| !! | TACTTCCTTTCCTTTTAGAG+AGG | - | chr8_1:38449095-38449114 | Msa1192580:CDS | 35.0% |
| ! | AGAATCCTCTCTAAAAGGAA+AGG | + | chr8_1:38449103-38449122 | None:intergenic | 35.0% |
| TCTCATTCATTACCAATGCT+GGG | + | chr8_1:38449357-38449376 | None:intergenic | 35.0% | |
| TTCTCATTCATTACCAATGC+TGG | + | chr8_1:38449358-38449377 | None:intergenic | 35.0% | |
| !! | AGCATTGGTAATGAATGAGA+AGG | - | chr8_1:38449357-38449376 | Msa1192580:intron | 35.0% |
| ! | CCGTTCTCATTAATGTCTTT+TGG | - | chr8_1:38449434-38449453 | Msa1192580:intron | 35.0% |
| ATGTATAGGACATGTCAGAT+TGG | - | chr8_1:38449464-38449483 | Msa1192580:intron | 35.0% | |
| TGTATAGGACATGTCAGATT+GGG | - | chr8_1:38449465-38449484 | Msa1192580:intron | 35.0% | |
| TTCAGGATGAAATTTGTGGA+TGG | - | chr8_1:38449601-38449620 | Msa1192580:intron | 35.0% | |
| !!! | CAAGTTTACTGCACTTTTTC+TGG | + | chr8_1:38449646-38449665 | None:intergenic | 35.0% |
| ! | AAAAGTGCAGTAAACTTGCT+TGG | - | chr8_1:38449648-38449667 | Msa1192580:intron | 35.0% |
| TGAACTACCGTAATAACCAA+GGG | + | chr8_1:38449723-38449742 | None:intergenic | 35.0% | |
| ATGAACTACCGTAATAACCA+AGG | + | chr8_1:38449724-38449743 | None:intergenic | 35.0% | |
| TTTGGCTGATAAACTGTCAA+TGG | + | chr8_1:38449786-38449805 | None:intergenic | 35.0% | |
| ! | CTTTTGACCCTTTTTACGTT+TGG | + | chr8_1:38449804-38449823 | None:intergenic | 35.0% |
| ATGTTGGAATCAGAAGGAAT+GGG | + | chr8_1:38449893-38449912 | None:intergenic | 35.0% | |
| !!! | GACTTTTTTCTGAGACATGT+TGG | + | chr8_1:38449909-38449928 | None:intergenic | 35.0% |
| TCACAATTACATTGCTAGCA+AGG | + | chr8_1:38450081-38450100 | None:intergenic | 35.0% | |
| GATCTCCGCAAGATATATAT+AGG | + | chr8_1:38450211-38450230 | None:intergenic | 35.0% | |
| ! | TAAAGTGTTCCTGATTGAAG+GGG | - | chr8_1:38450252-38450271 | Msa1192580:intron | 35.0% |
| ! | CATATATGGCAGTTACTTTG+GGG | - | chr8_1:38450467-38450486 | Msa1192580:intron | 35.0% |
| TAACAATGCTCATTCGAACA+CGG | - | chr8_1:38450637-38450656 | Msa1192580:CDS | 35.0% | |
| ! | ATACTTCTTGTTATCCTGTG+CGG | - | chr8_1:38450945-38450964 | Msa1192580:CDS | 35.0% |
| CTAACTATTACTTGGAGAAG+GGG | + | chr8_1:38451120-38451139 | None:intergenic | 35.0% | |
| GCTAACTATTACTTGGAGAA+GGG | + | chr8_1:38451121-38451140 | None:intergenic | 35.0% | |
| TGCTAACTATTACTTGGAGA+AGG | + | chr8_1:38451122-38451141 | None:intergenic | 35.0% | |
| AGTGAGAAGCTGAAATAAGA+TGG | + | chr8_1:38451172-38451191 | None:intergenic | 35.0% | |
| TCAGCTTCTCACTTCAATTA+TGG | - | chr8_1:38451179-38451198 | Msa1192580:CDS | 35.0% | |
| CTCACTTCAATTATGGAAGT+TGG | - | chr8_1:38451186-38451205 | Msa1192580:CDS | 35.0% | |
| TTCAATTATGGAAGTTGGAG+AGG | - | chr8_1:38451191-38451210 | Msa1192580:CDS | 35.0% | |
| ! | TTTCAGTCTAACGTATTGGC+GGG | + | chr8_1:38446342-38446361 | None:intergenic | 40.0% |
| GTTTCAGTCTAACGTATTGG+CGG | + | chr8_1:38446343-38446362 | None:intergenic | 40.0% | |
| AAATGGAGAGGAGATGGAAA+GGG | + | chr8_1:38446529-38446548 | None:intergenic | 40.0% | |
| AAAAATGAATCGGAGGTGGA+GGG | + | chr8_1:38446578-38446597 | None:intergenic | 40.0% | |
| AGAGAAAAATGAATCGGAGG+TGG | + | chr8_1:38446582-38446601 | None:intergenic | 40.0% | |
| TCAACAGGAGGTGAAAATCA+AGG | - | chr8_1:38446633-38446652 | Msa1192580:CDS | 40.0% | |
| AACTCCTTGCTAACATTCGA+AGG | + | chr8_1:38446729-38446748 | None:intergenic | 40.0% | |
| TCGATGGTTCAAACTCTACA+TGG | - | chr8_1:38447007-38447026 | Msa1192580:intron | 40.0% | |
| !! | AAGCCTTATTCCACTAAGTG+GGG | + | chr8_1:38447379-38447398 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | + | chr8_1:38447380-38447399 | None:intergenic | 40.0% |
| TTTGAATCCCAAAGTTCCGA+AGG | - | chr8_1:38447473-38447492 | Msa1192580:intron | 40.0% | |
| TTTGGATACGAGCTCCAATT+GGG | + | chr8_1:38447511-38447530 | None:intergenic | 40.0% | |
| GCATTTGCATATTGTGAGGA+TGG | + | chr8_1:38447704-38447723 | None:intergenic | 40.0% | |
| GTAGGCATTTGCATATTGTG+AGG | + | chr8_1:38447708-38447727 | None:intergenic | 40.0% | |
| CAGAGCTTTGCATGTCAATA+GGG | + | chr8_1:38448123-38448142 | None:intergenic | 40.0% | |
| AACAGGGTCTCCAAAATGTT+CGG | - | chr8_1:38448230-38448249 | Msa1192580:intron | 40.0% | |
| AAGACCATAAACTCAGATGG+AGG | + | chr8_1:38448364-38448383 | None:intergenic | 40.0% | |
| ATCTGGCATCAACCTGAAAA+TGG | + | chr8_1:38448734-38448753 | None:intergenic | 40.0% | |
| !! | GGAAAGGAAGTATCTGCAAA+AGG | + | chr8_1:38449087-38449106 | None:intergenic | 40.0% |
| ATTTCAAATGTGCTGGAGAC+TGG | - | chr8_1:38449142-38449161 | Msa1192580:CDS | 40.0% | |
| TTCAATTAACACAGGGATGG+AGG | - | chr8_1:38449287-38449306 | Msa1192580:intron | 40.0% | |
| TTTCGTAGAAGTAACAGGGA+TGG | - | chr8_1:38449390-38449409 | Msa1192580:intron | 40.0% | |
| AGGATGAAATTTGTGGATGG+AGG | - | chr8_1:38449604-38449623 | Msa1192580:intron | 40.0% | |
| GGATGAAATTTGTGGATGGA+GGG | - | chr8_1:38449605-38449624 | Msa1192580:intron | 40.0% | |
| GAACTACCGTAATAACCAAG+GGG | + | chr8_1:38449722-38449741 | None:intergenic | 40.0% | |
| GGTTATTACGGTAGTTCATG+TGG | - | chr8_1:38449725-38449744 | Msa1192580:intron | 40.0% | |
| CATGTTGGAATCAGAAGGAA+TGG | + | chr8_1:38449894-38449913 | None:intergenic | 40.0% | |
| TGAGACATGTTGGAATCAGA+AGG | + | chr8_1:38449899-38449918 | None:intergenic | 40.0% | |
| ! | AAAGTGTTCCTGATTGAAGG+GGG | - | chr8_1:38450253-38450272 | Msa1192580:intron | 40.0% |
| GAAACAGCTATGGTATACAG+TGG | + | chr8_1:38450669-38450688 | None:intergenic | 40.0% | |
| TAAACCTTGTGTGTCCTTTC+AGG | - | chr8_1:38450862-38450881 | Msa1192580:CDS | 40.0% | |
| !! | GCTTATGGCATTGATTATGC+CGG | - | chr8_1:38450913-38450932 | Msa1192580:CDS | 40.0% |
| ATTGATTATGCCGGATAAGC+AGG | - | chr8_1:38450922-38450941 | Msa1192580:CDS | 40.0% | |
| !! | CAAGAAGTATCCTGCTTATC+CGG | + | chr8_1:38450935-38450954 | None:intergenic | 40.0% |
| ! | TACTTCTTGTTATCCTGTGC+GGG | - | chr8_1:38450946-38450965 | Msa1192580:CDS | 40.0% |
| TTGTGGGTTCAGTCTCAAAA+TGG | - | chr8_1:38451253-38451272 | Msa1192580:CDS | 40.0% | |
| GAAATGGAGAGGAGATGGAA+AGG | + | chr8_1:38446530-38446549 | None:intergenic | 45.0% | |
| AGAATTGGGGAAATTACCGG+CGG | + | chr8_1:38446552-38446571 | None:intergenic | 45.0% | |
| GAAAAATGAATCGGAGGTGG+AGG | + | chr8_1:38446579-38446598 | None:intergenic | 45.0% | |
| !!! | GCGCGTGTGATTTTTGAGAT+AGG | + | chr8_1:38446679-38446698 | None:intergenic | 45.0% |
| CTTGCTAACATTCGAAGGTG+TGG | + | chr8_1:38446724-38446743 | None:intergenic | 45.0% | |
| CACACCTTCGAATGTTAGCA+AGG | - | chr8_1:38446722-38446741 | Msa1192580:CDS | 45.0% | |
| AATCCACGGCAGCAACAATT+CGG | + | chr8_1:38446918-38446937 | None:intergenic | 45.0% | |
| GAGGGTAGTCAGATCATTAG+AGG | - | chr8_1:38447245-38447264 | Msa1192580:intron | 45.0% | |
| GGTAGTCAGATCATTAGAGG+TGG | - | chr8_1:38447248-38447267 | Msa1192580:intron | 45.0% | |
| AGTCAGATCATTAGAGGTGG+AGG | - | chr8_1:38447251-38447270 | Msa1192580:intron | 45.0% | |
| GTCAGATCATTAGAGGTGGA+GGG | - | chr8_1:38447252-38447271 | Msa1192580:intron | 45.0% | |
| CTTATTCCACTAAGTGGGGT+CGG | + | chr8_1:38447375-38447394 | None:intergenic | 45.0% | |
| !! | CCAAGCCTTATTCCACTAAG+TGG | + | chr8_1:38447381-38447400 | None:intergenic | 45.0% |
| CCACTTAGTGGAATAAGGCT+TGG | - | chr8_1:38447378-38447397 | Msa1192580:intron | 45.0% | |
| CTTAGTGGAATAAGGCTTGG+TGG | - | chr8_1:38447381-38447400 | Msa1192580:intron | 45.0% | |
| TTGGATACGAGCTCCAATTG+GGG | + | chr8_1:38447510-38447529 | None:intergenic | 45.0% | |
| CTTTGGATACGAGCTCCAAT+TGG | + | chr8_1:38447512-38447531 | None:intergenic | 45.0% | |
| ! | CAAGGGCACGAGAATTTCTT+TGG | + | chr8_1:38447529-38447548 | None:intergenic | 45.0% |
| TTTCCATGTCTGCTCTGTCA+TGG | + | chr8_1:38447672-38447691 | None:intergenic | 45.0% | |
| TGACAGAGCAGACATGGAAA+TGG | - | chr8_1:38447672-38447691 | Msa1192580:intron | 45.0% | |
| TGGAAACAGACTTACTACCG+TGG | - | chr8_1:38448008-38448027 | Msa1192580:CDS | 45.0% | |
| GGAAACAGACTTACTACCGT+GGG | - | chr8_1:38448009-38448028 | Msa1192580:CDS | 45.0% | |
| GAACGAGAAAGACATTCCCA+CGG | + | chr8_1:38448028-38448047 | None:intergenic | 45.0% | |
| GCAGAGCTTTGCATGTCAAT+AGG | + | chr8_1:38448124-38448143 | None:intergenic | 45.0% | |
| GGTCTCCAAAATGTTCGGAA+TGG | - | chr8_1:38448235-38448254 | Msa1192580:intron | 45.0% | |
| ! | CAAGGCCATTCCGAACATTT+TGG | + | chr8_1:38448243-38448262 | None:intergenic | 45.0% |
| CAAAATGTTCGGAATGGCCT+TGG | - | chr8_1:38448241-38448260 | Msa1192580:intron | 45.0% | |
| CATAAACTCAGATGGAGGAG+AGG | + | chr8_1:38448359-38448378 | None:intergenic | 45.0% | |
| CTCTCCTCCATCTGAGTTTA+TGG | - | chr8_1:38448357-38448376 | Msa1192580:intron | 45.0% | |
| GTAGGACTTCACCTGTAAGT+AGG | + | chr8_1:38448452-38448471 | None:intergenic | 45.0% | |
| !! | AGCTAGAGTTGATGGCATGT+AGG | + | chr8_1:38448470-38448489 | None:intergenic | 45.0% |
| AGTAGAGGAGCTAGAGTTGA+TGG | + | chr8_1:38448478-38448497 | None:intergenic | 45.0% | |
| ! | TTTTCTCTTCCCTCGTCACA+CGG | - | chr8_1:38448614-38448633 | Msa1192580:intron | 45.0% |
| GCATCAACCTGAAAATGGAG+GGG | + | chr8_1:38448729-38448748 | None:intergenic | 45.0% | |
| GGCATCAACCTGAAAATGGA+GGG | + | chr8_1:38448730-38448749 | None:intergenic | 45.0% | |
| TGGCATCAACCTGAAAATGG+AGG | + | chr8_1:38448731-38448750 | None:intergenic | 45.0% | |
| GGGAGAGAATCCTCTCTAAA+AGG | + | chr8_1:38449108-38449127 | None:intergenic | 45.0% | |
| TTAGAGAGGATTCTCTCCCT+AGG | - | chr8_1:38449109-38449128 | Msa1192580:CDS | 45.0% | |
| ATCTGCAATCTTCCCAGCAT+TGG | - | chr8_1:38449342-38449361 | Msa1192580:intron | 45.0% | |
| TGAAATTTGTGGATGGAGGG+AGG | - | chr8_1:38449608-38449627 | Msa1192580:intron | 45.0% | |
| ATTTACTCAGCTATGCCCCT+TGG | - | chr8_1:38449704-38449723 | Msa1192580:intron | 45.0% | |
| GCTATGCCCCTTGGTTATTA+CGG | - | chr8_1:38449713-38449732 | Msa1192580:intron | 45.0% | |
| ! | ATTTTTGTAGGGGCCACCAA+TGG | - | chr8_1:38449754-38449773 | Msa1192580:intron | 45.0% |
| TCAATGGAAGTCTCCATTGG+TGG | + | chr8_1:38449770-38449789 | None:intergenic | 45.0% | |
| CTGTCAATGGAAGTCTCCAT+TGG | + | chr8_1:38449773-38449792 | None:intergenic | 45.0% | |
| CCAATAACTCCCCCATAGAA+CGG | + | chr8_1:38449847-38449866 | None:intergenic | 45.0% | |
| AAAACTTGCCCCCTTCAATC+AGG | + | chr8_1:38450264-38450283 | None:intergenic | 45.0% | |
| !! | CAGTTACTTTGGGGTACTGA+TGG | - | chr8_1:38450476-38450495 | Msa1192580:intron | 45.0% |
| !! | TTTGGGGTACTGATGGCATA+TGG | - | chr8_1:38450483-38450502 | Msa1192580:intron | 45.0% |
| GTGTGGTACAGAAACAGCTA+TGG | + | chr8_1:38450679-38450698 | None:intergenic | 45.0% | |
| AACTGGGTACTTGGAGAACT+AGG | - | chr8_1:38450714-38450733 | Msa1192580:intron | 45.0% | |
| ATCTCCTGAAAGGACACACA+AGG | + | chr8_1:38450869-38450888 | None:intergenic | 45.0% | |
| ATCAGCACTCATCTCCTGAA+AGG | + | chr8_1:38450879-38450898 | None:intergenic | 45.0% | |
| CTGAAAAGAGAAGCAGAGTC+AGG | + | chr8_1:38451070-38451089 | None:intergenic | 45.0% | |
| AGAAGGGGTAGAAAATCAGG+GGG | + | chr8_1:38451105-38451124 | None:intergenic | 45.0% | |
| GAGAAGGGGTAGAAAATCAG+GGG | + | chr8_1:38451106-38451125 | None:intergenic | 45.0% | |
| GGAGAAGGGGTAGAAAATCA+GGG | + | chr8_1:38451107-38451126 | None:intergenic | 45.0% | |
| TGGAGAAGGGGTAGAAAATC+AGG | + | chr8_1:38451108-38451127 | None:intergenic | 45.0% | |
| AGACTGAACCCACAAGAGAT+GGG | + | chr8_1:38451248-38451267 | None:intergenic | 45.0% | |
| AAAATGGCTAACGTCCAGTC+TGG | - | chr8_1:38451269-38451288 | Msa1192580:CDS | 45.0% | |
| !! | TAAATATAATTATAAAATCA+AGG | + | chr8_1:38449027-38449046 | None:intergenic | 5.0% |
| !! | TATTCTTATTAATAATTATA+CGG | - | chr8_1:38450422-38450441 | Msa1192580:intron | 5.0% |
| ! | GTCTAACGTATTGGCGGGAA+GGG | + | chr8_1:38446337-38446356 | None:intergenic | 50.0% |
| ! | AGTCTAACGTATTGGCGGGA+AGG | + | chr8_1:38446338-38446357 | None:intergenic | 50.0% |
| !! | TGGAAATTCGCGGTGTTGCT+CGG | + | chr8_1:38446394-38446413 | None:intergenic | 50.0% |
| AGCAACACCGCGAATTTCCA+TGG | - | chr8_1:38446394-38446413 | Msa1192580:CDS | 50.0% | |
| AACACCGCGAATTTCCATGG+CGG | - | chr8_1:38446397-38446416 | Msa1192580:CDS | 50.0% | |
| ATCTCCGCCATGGAAATTCG+CGG | + | chr8_1:38446404-38446423 | None:intergenic | 50.0% | |
| GATGAGAGTAATCTCCGCCA+TGG | + | chr8_1:38446414-38446433 | None:intergenic | 50.0% | |
| AGGAGATGGAAAGGGAAGTG+AGG | + | chr8_1:38446521-38446540 | None:intergenic | 50.0% | |
| AATTACCGGCGGAAATGGAG+AGG | + | chr8_1:38446541-38446560 | None:intergenic | 50.0% | |
| AGGTGGAGGGTGAAGAATTG+GGG | + | chr8_1:38446565-38446584 | None:intergenic | 50.0% | |
| GAGGTGGAGGGTGAAGAATT+GGG | + | chr8_1:38446566-38446585 | None:intergenic | 50.0% | |
| CGCCGCAATGTTGATATCAC+CGG | - | chr8_1:38446696-38446715 | Msa1192580:CDS | 50.0% | |
| CGCCGGTGATATCAACATTG+CGG | + | chr8_1:38446701-38446720 | None:intergenic | 50.0% | |
| TGCAGATTCGGCACAAGTTC+CGG | + | chr8_1:38446961-38446980 | None:intergenic | 50.0% | |
| TGCACTTCTCAGACCCTTTC+AGG | - | chr8_1:38447059-38447078 | Msa1192580:intron | 50.0% | |
| CGACCCCACTTAGTGGAATA+AGG | - | chr8_1:38447373-38447392 | Msa1192580:intron | 50.0% | |
| GAAATTCTCGTGCCCTTGCT+TGG | - | chr8_1:38447531-38447550 | Msa1192580:intron | 50.0% | |
| TGCTCTGTCATGGTTCGCTA+CGG | + | chr8_1:38447662-38447681 | None:intergenic | 50.0% | |
| GAACCATGACAGAGCAGACA+TGG | - | chr8_1:38447666-38447685 | Msa1192580:intron | 50.0% | |
| TTTCCTATGCCGTGTGACGA+GGG | + | chr8_1:38448626-38448645 | None:intergenic | 50.0% | |
| CCGTTCTATGGGGGAGTTAT+TGG | - | chr8_1:38449844-38449863 | Msa1192580:intron | 50.0% | |
| TTTGCGCTAGCAATGAGGTG+TGG | + | chr8_1:38450696-38450715 | None:intergenic | 50.0% | |
| ACCTCATTGCTAGCGCAAAC+TGG | - | chr8_1:38450697-38450716 | Msa1192580:CDS | 50.0% | |
| CCTCATTGCTAGCGCAAACT+GGG | - | chr8_1:38450698-38450717 | Msa1192580:CDS | 50.0% | |
| GATTGAGTGTGTCTGACCTC+TGG | + | chr8_1:38450750-38450769 | None:intergenic | 50.0% | |
| ATGGGACGATGTGTGGGATA+TGG | + | chr8_1:38451230-38451249 | None:intergenic | 50.0% | |
| CAAGAGATGGGACGATGTGT+GGG | + | chr8_1:38451236-38451255 | None:intergenic | 50.0% | |
| ACAAGAGATGGGACGATGTG+TGG | + | chr8_1:38451237-38451256 | None:intergenic | 50.0% | |
| ACACATCGTCCCATCTCTTG+TGG | - | chr8_1:38451236-38451255 | Msa1192580:CDS | 50.0% | |
| CACATCGTCCCATCTCTTGT+GGG | - | chr8_1:38451237-38451256 | Msa1192580:CDS | 50.0% | |
| GAGACTGAACCCACAAGAGA+TGG | + | chr8_1:38451249-38451268 | None:intergenic | 50.0% | |
| ! | GGCTGAGGGTTTGGTTGAGA+AGG | + | chr8_1:38446442-38446461 | None:intergenic | 55.0% |
| GAAAGGGAAGTGAGGAGCGA+CGG | + | chr8_1:38446513-38446532 | None:intergenic | 55.0% | |
| CATCTCCTCTCCATTTCCGC+CGG | - | chr8_1:38446533-38446552 | Msa1192580:intron | 55.0% | |
| GGGGAAATTACCGGCGGAAA+TGG | + | chr8_1:38446546-38446565 | None:intergenic | 55.0% | |
| GGAGGTGGAGGGTGAAGAAT+TGG | + | chr8_1:38446567-38446586 | None:intergenic | 55.0% | |
| ! | AACATTCGAAGGTGTGGCGC+CGG | + | chr8_1:38446718-38446737 | None:intergenic | 55.0% |
| GTTCCGAATTGTTGCTGCCG+TGG | - | chr8_1:38446912-38446931 | Msa1192580:CDS | 55.0% | |
| CTAAGTGGGGTCGGCTACAT+GGG | + | chr8_1:38447366-38447385 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8_1:38447367-38447386 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8_1:38447366-38447385 | Msa1192580:intron | 55.0% | |
| TCCCAAAGTTCCGAAGGAGC+CGG | - | chr8_1:38447479-38447498 | Msa1192580:intron | 55.0% | |
| ! | ACCGGCTCCTTCGGAACTTT+GGG | + | chr8_1:38447483-38447502 | None:intergenic | 55.0% |
| !! | TACCGGCTCCTTCGGAACTT+TGG | + | chr8_1:38447484-38447503 | None:intergenic | 55.0% |
| AGCTCCAATTGGGGTGGTAC+CGG | + | chr8_1:38447501-38447520 | None:intergenic | 55.0% | |
| GATACGAGCTCCAATTGGGG+TGG | + | chr8_1:38447507-38447526 | None:intergenic | 55.0% | |
| GTTTCCTATGCCGTGTGACG+AGG | + | chr8_1:38448627-38448646 | None:intergenic | 55.0% | |
| GGTGAGCTGACACCAGCTAA+AGG | + | chr8_1:38448918-38448937 | None:intergenic | 55.0% | |
| AAGCAACCAGCGCCGTTCTA+TGG | - | chr8_1:38449832-38449851 | Msa1192580:intron | 55.0% | |
| AGCAACCAGCGCCGTTCTAT+GGG | - | chr8_1:38449833-38449852 | Msa1192580:intron | 55.0% | |
| !! | GGGGTACTGATGGCATATGG+TGG | - | chr8_1:38450486-38450505 | Msa1192580:intron | 55.0% |
| GGCATATGGTGGTCTGCAAG+AGG | - | chr8_1:38450497-38450516 | Msa1192580:intron | 55.0% | |
| ATGGTGGTCTGCAAGAGGTG+AGG | - | chr8_1:38450502-38450521 | Msa1192580:intron | 55.0% | |
| CCCAGTTTGCGCTAGCAATG+AGG | + | chr8_1:38450701-38450720 | None:intergenic | 55.0% | |
| GCTAGCGCAAACTGGGTACT+TGG | - | chr8_1:38450705-38450724 | Msa1192580:intron | 55.0% | |
| ACTAGGCTCCTGTCTACCAG+AGG | - | chr8_1:38450731-38450750 | Msa1192580:intron | 55.0% | |
| GTGTCTGACCTCTGGTAGAC+AGG | + | chr8_1:38450742-38450761 | None:intergenic | 55.0% | |
| ! | TAACGTCCAGTCTGGAGCCT+TGG | - | chr8_1:38451277-38451296 | Msa1192580:CDS | 55.0% |
| !! | TGTGAACGTTGGTGGCGTCG+GGG | + | chr8_1:38446463-38446482 | None:intergenic | 60.0% |
| !! | GTGTGAACGTTGGTGGCGTC+GGG | + | chr8_1:38446464-38446483 | None:intergenic | 60.0% |
| !! | GGTGTGAACGTTGGTGGCGT+CGG | + | chr8_1:38446465-38446484 | None:intergenic | 60.0% |
| ! | GGTGGAGGTGTGAACGTTGG+TGG | + | chr8_1:38446471-38446490 | None:intergenic | 60.0% |
| AGTGAGGAGCGACGGAGAGA+CGG | + | chr8_1:38446505-38446524 | None:intergenic | 60.0% | |
| CGGCGGAAATGGAGAGGAGA+TGG | + | chr8_1:38446535-38446554 | None:intergenic | 60.0% | |
| CTTCCCTCGTCACACGGCAT+AGG | - | chr8_1:38448620-38448639 | Msa1192580:intron | 60.0% | |
| GCAACCAGCGCCGTTCTATG+GGG | - | chr8_1:38449834-38449853 | Msa1192580:intron | 60.0% | |
| CAACCAGCGCCGTTCTATGG+GGG | - | chr8_1:38449835-38449854 | Msa1192580:intron | 60.0% | |
| CTGTGCGGGTTTCTGCTGCT+GGG | - | chr8_1:38450960-38450979 | Msa1192580:CDS | 60.0% | |
| TGTGCGGGTTTCTGCTGCTG+GGG | - | chr8_1:38450961-38450980 | Msa1192580:CDS | 60.0% | |
| ! | GGCGGTGGAGGTGTGAACGT+TGG | + | chr8_1:38446474-38446493 | None:intergenic | 65.0% |
| GACGGAGAGACGGTCGAGCT+CGG | + | chr8_1:38446495-38446514 | None:intergenic | 65.0% | |
| !! | TGGGGTGGTACCGGCTCCTT+CGG | + | chr8_1:38447492-38447511 | None:intergenic | 65.0% |
| GGAGCCGGTACCACCCCAAT+TGG | - | chr8_1:38447494-38447513 | Msa1192580:intron | 65.0% | |
| ACTCCCCCATAGAACGGCGC+TGG | + | chr8_1:38449841-38449860 | None:intergenic | 65.0% | |
| CCAGCAGCAGAAACCCGCAC+AGG | + | chr8_1:38450962-38450981 | None:intergenic | 65.0% | |
| CCTGTGCGGGTTTCTGCTGC+TGG | - | chr8_1:38450959-38450978 | Msa1192580:CDS | 65.0% | |
| CTGAGGCCAAGGCTCCAGAC+TGG | + | chr8_1:38451286-38451305 | None:intergenic | 65.0% | |
| ! | TGGCGTCGGGGCTGAGGGTT+TGG | + | chr8_1:38446451-38446470 | None:intergenic | 70.0% |
| !! | GTTGGTGGCGTCGGGGCTGA+GGG | + | chr8_1:38446456-38446475 | None:intergenic | 70.0% |
| GGAGAGACGGTCGAGCTCGG+CGG | + | chr8_1:38446492-38446511 | None:intergenic | 70.0% | |
| !! | CGTTGGTGGCGTCGGGGCTG+AGG | + | chr8_1:38446457-38446476 | None:intergenic | 75.0% |
| ACGGTCGAGCTCGGCGGTGG+AGG | + | chr8_1:38446486-38446505 | None:intergenic | 75.0% | |
| GAGACGGTCGAGCTCGGCGG+TGG | + | chr8_1:38446489-38446508 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 38446329 | 38451305 | 38446329 | ID=Msa1192580;Name=Msa1192580 |
| chr8_1 | mRNA | 38446329 | 38451305 | 38446329 | ID=Msa1192580-mRNA-1;Parent=Msa1192580;Name=Msa1192580-mRNA-1;_AED=0.31;_eAED=0.36;_QI=0|0|0|0.75|1|1|16|0|670 |
| chr8_1 | exon | 38451080 | 38451305 | 38451080 | ID=Msa1192580-mRNA-1:exon:12585;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38450819 | 38450994 | 38450819 | ID=Msa1192580-mRNA-1:exon:12584;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38450554 | 38450721 | 38450554 | ID=Msa1192580-mRNA-1:exon:12583;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38450056 | 38450166 | 38450056 | ID=Msa1192580-mRNA-1:exon:12582;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38449899 | 38449976 | 38449899 | ID=Msa1192580-mRNA-1:exon:12581;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38448978 | 38449174 | 38448978 | ID=Msa1192580-mRNA-1:exon:12580;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38448833 | 38448893 | 38448833 | ID=Msa1192580-mRNA-1:exon:12579;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38448466 | 38448540 | 38448466 | ID=Msa1192580-mRNA-1:exon:12578;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38448256 | 38448333 | 38448256 | ID=Msa1192580-mRNA-1:exon:12577;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38448100 | 38448162 | 38448100 | ID=Msa1192580-mRNA-1:exon:12576;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38447945 | 38448028 | 38447945 | ID=Msa1192580-mRNA-1:exon:12575;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38447698 | 38447870 | 38447698 | ID=Msa1192580-mRNA-1:exon:12574;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38447116 | 38447155 | 38447116 | ID=Msa1192580-mRNA-1:exon:12573;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38446882 | 38447025 | 38446882 | ID=Msa1192580-mRNA-1:exon:12572;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38446631 | 38446750 | 38446631 | ID=Msa1192580-mRNA-1:exon:12571;Parent=Msa1192580-mRNA-1 |
| chr8_1 | exon | 38446329 | 38446544 | 38446329 | ID=Msa1192580-mRNA-1:exon:12570;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38451080 | 38451305 | 38451080 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38450819 | 38450994 | 38450819 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38450554 | 38450721 | 38450554 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38450056 | 38450166 | 38450056 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38449899 | 38449976 | 38449899 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38448978 | 38449174 | 38448978 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38448833 | 38448893 | 38448833 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38448466 | 38448540 | 38448466 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38448256 | 38448333 | 38448256 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38448100 | 38448162 | 38448100 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38447945 | 38448028 | 38447945 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38447698 | 38447870 | 38447698 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38447116 | 38447155 | 38447116 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38446882 | 38447025 | 38446882 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38446631 | 38446750 | 38446631 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| chr8_1 | CDS | 38446329 | 38446544 | 38446329 | ID=Msa1192580-mRNA-1:cds;Parent=Msa1192580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
