AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0114710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114710 MtrunA17_Chr1g0179211 99.721 358 1 0 1 358 1 358 0.0 732
Msa0114710 MtrunA17_Chr7g0265821 87.151 358 46 0 1 358 1 358 0.0 653
Msa0114710 MtrunA17_Chr5g0429051 86.313 358 49 0 1 358 1 358 0.0 639
Msa0114710 MtrunA17_Chr5g0447091 75.978 358 85 1 1 358 1 357 0.0 557
Msa0114710 MtrunA17_Chr4g0028361 55.682 352 151 4 8 358 53 400 2.09e-131 381
Msa0114710 MtrunA17_Chr4g0035951 55.398 352 152 4 8 358 53 400 1.06e-130 379
Msa0114710 MtrunA17_Chr1g0208981 52.809 356 163 4 4 358 40 391 3.11e-128 373
Msa0114710 MtrunA17_Chr5g0429031 84.834 211 32 0 1 211 42 252 5.39e-126 362
Msa0114710 MtrunA17_Chr4g0035981 53.138 239 107 4 121 358 6 240 2.50e-81 248
Msa0114710 MtrunA17_Chr5g0429021 80.916 131 25 0 228 358 1 131 6.34e-74 225
Msa0114710 MtrunA17_Chr7g0265811 69.792 96 4 1 112 207 21 91 3.81e-37 129
Msa0114710 MtrunA17_Chr4g0035971 55.814 86 38 0 8 93 51 136 3.19e-23 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114710 AT2G36460.1 87.151 358 46 0 1 358 1 358 0.0 646
Msa0114710 AT3G52930.1 86.592 358 48 0 1 358 1 358 0.0 640
Msa0114710 AT5G03690.2 86.351 359 48 1 1 358 1 359 0.0 614
Msa0114710 AT5G03690.1 86.819 349 45 1 11 358 45 393 0.0 600
Msa0114710 AT4G26530.1 77.933 358 79 0 1 358 1 358 0.0 574
Msa0114710 AT4G26530.3 77.933 358 79 0 1 358 1 358 0.0 574
Msa0114710 AT4G26530.2 77.933 358 79 0 1 358 1 358 0.0 574
Msa0114710 AT4G26520.1 73.184 358 96 0 1 358 1 358 0.0 533
Msa0114710 AT4G26520.3 73.315 356 95 0 1 356 1 356 0.0 529
Msa0114710 AT4G26520.2 73.066 349 94 0 10 358 7 355 0.0 518
Msa0114710 AT4G26520.4 73.066 349 94 0 10 358 7 355 0.0 518
Msa0114710 AT2G36460.3 88.015 267 32 0 92 358 1 267 1.49e-175 488
Msa0114710 AT2G36460.2 88.015 267 32 0 92 358 1 267 1.49e-175 488
Msa0114710 AT5G03690.3 87.640 267 32 1 93 358 1 267 9.72e-164 458
Msa0114710 AT5G03690.4 87.640 267 32 1 93 358 1 267 9.72e-164 458
Msa0114710 AT4G38970.1 55.367 354 153 4 6 358 49 398 4.71e-132 383
Msa0114710 AT2G21330.1 54.237 354 157 4 6 358 50 399 5.04e-129 375
Msa0114710 AT2G01140.1 54.830 352 154 4 8 358 44 391 2.84e-128 373
Msa0114710 AT2G21330.3 52.260 354 154 5 6 358 50 389 6.21e-120 352
Msa0114710 AT4G38970.2 55.598 259 113 2 6 263 49 306 8.51e-94 285
Msa0114710 AT2G21330.2 53.668 259 118 2 6 263 50 307 2.05e-91 276

Find 106 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTGATTGAACTTGTTT+TGG 0.229590 1_3:+32731526 Msa0114710:three_prime_UTR
TGGACTCTTACATTCTCTTA+TGG 0.280031 1_3:+32731296 Msa0114710:CDS
GATCCTGGTGTAACCATATT+AGG 0.283960 1_3:-32731104 None:intergenic
AGCAATGCAGCTTGAGCTTT+AGG 0.286122 1_3:-32731374 None:intergenic
CTCAAGCTGCATTGCTTGTT+AGG 0.288958 1_3:+32731381 Msa0114710:CDS
GACAAGGGAGATGGTTCATT+TGG 0.333091 1_3:-32730879 None:intergenic
TCAAGCTGAACTGGCTTGAT+TGG 0.334716 1_3:+32731643 Msa0114710:three_prime_UTR
GCTGCTTACATTGGCTCTCC+TGG 0.358440 1_3:+32730092 Msa0114710:CDS
ATAACCTCAGGAGCAACTTT+AGG 0.366412 1_3:-32731134 None:intergenic
TAATGCAATGAACAAACTTA+AGG 0.371253 1_3:+32731262 Msa0114710:CDS
TAAGTTTGTTCATTGCATTA+AGG 0.377716 1_3:-32731259 None:intergenic
CTTGAAAGAAGACATGTTAG+AGG 0.380210 1_3:-32728086 None:intergenic
CCGGTGCAAGGTTCGCTAAA+TGG 0.381985 1_3:+32730835 Msa0114710:CDS
TTGTGGTAAAGTATCAATAA+TGG 0.382123 1_3:+32731618 Msa0114710:three_prime_UTR
AAGAAAGCTGGAGTTCTTCC+TGG 0.384415 1_3:+32730708 Msa0114710:CDS
TTCAGAGTCTCTTCATGTTA+AGG 0.387381 1_3:+32731469 Msa0114710:CDS
AGTTGTATGCATCATGGTTA+TGG 0.395562 1_3:+32731549 Msa0114710:three_prime_UTR
GTTGAACTTGCCGGCACAAA+TGG 0.411220 1_3:+32730753 Msa0114710:CDS
GATGAATCTACTGGCACAAT+TGG 0.412825 1_3:+32730134 Msa0114710:CDS
GAACTCTTGTTCACTGCCCC+TGG 0.414062 1_3:+32730215 Msa0114710:CDS
AATGCAATGAACAAACTTAA+GGG 0.427010 1_3:+32731263 Msa0114710:CDS
AGAATCTCAGGTTCTACAAT+TGG 0.430166 1_3:-32730966 None:intergenic
GACCATCATGTTCTTCTTGA+AGG 0.430660 1_3:+32731068 Msa0114710:CDS
ATAATGGCTTCAAGCTGAAC+TGG 0.434807 1_3:+32731634 Msa0114710:three_prime_UTR
CAAAGCTCGGACTGTGTGTT+GGG 0.435174 1_3:-32731159 None:intergenic
AAGGGAACCGTTGAACTTGC+CGG 0.435648 1_3:+32730744 Msa0114710:CDS
GCAGCAAGGATACCCTTTCC+AGG 0.444842 1_3:-32730110 None:intergenic
TGGAGTTCTTCCTGGTATCA+AGG 0.454086 1_3:+32730716 Msa0114710:CDS
CCCTTGTCAACCTTGATACC+AGG 0.464495 1_3:-32730726 None:intergenic
AGAAACCACAACTCAAGGTT+TGG 0.472063 1_3:+32730776 Msa0114710:CDS
GCAAACTCAGAAGCAACTCT+TGG 0.473378 1_3:+32731410 Msa0114710:CDS
AACTTAAGGGAAAGAAGCCT+TGG 0.474897 1_3:+32731276 Msa0114710:CDS
CAAATACTAATATGTTAAAG+AGG 0.476989 1_3:+32731496 Msa0114710:exon
GCAACTCTTGGAACTTATCA+AGG 0.480838 1_3:+32731422 Msa0114710:CDS
GCCGTCATATGTCAAGAGAA+TGG 0.487020 1_3:+32730936 Msa0114710:CDS
CCAGACAAGAAAACTATAGC+TGG 0.490239 1_3:-32731206 None:intergenic
GATCCATCCACTAGAATCTC+AGG 0.492290 1_3:-32730978 None:intergenic
TACATTGGCTCTCCTGGAAA+GGG 0.492987 1_3:+32730098 Msa0114710:CDS
TGTTCTTGCAGCATGTTACA+AGG 0.495030 1_3:+32731037 Msa0114710:CDS
AGCTGGAACTGCGGCAGGAA+CGG 0.501285 1_3:-32731189 None:intergenic
ACTTCAGCAAAGTACTCTTA+AGG 0.501897 1_3:+32731325 Msa0114710:CDS
TTCTTCAACACATCCACAAA+GGG 0.502730 1_3:-32730690 None:intergenic
ACTATAGCTGGAACTGCGGC+AGG 0.507134 1_3:-32731194 None:intergenic
AGAGCCAATGTAAGCAGCAT+TGG 0.511633 1_3:-32730087 None:intergenic
GCAAAGTACTCTTAAGGCAT+GGG 0.512733 1_3:+32731331 Msa0114710:CDS
GTGTGTTGGGCTATAACCTC+AGG 0.515555 1_3:-32731146 None:intergenic
CTTGCTGCTGATGAATCTAC+TGG 0.520412 1_3:+32730125 Msa0114710:CDS
TCGTGGATTGACAAGGGAGA+TGG 0.521733 1_3:-32730888 None:intergenic
ATTGCCAATGCTGCTTACAT+TGG 0.522063 1_3:+32730083 Msa0114710:CDS
ACAAAGCTCGGACTGTGTGT+TGG 0.522609 1_3:-32731160 None:intergenic
TTACATTGGCTCTCCTGGAA+AGG 0.522941 1_3:+32730097 Msa0114710:CDS
CTCTTACATTCTCTTATGGA+AGG 0.525023 1_3:+32731300 Msa0114710:CDS
GTGGATGTGTTGAAGAAAGC+TGG 0.525235 1_3:+32730696 Msa0114710:CDS
TGTGGTTTCTCCATTTGTGC+CGG 0.528303 1_3:-32730763 None:intergenic
CTGAGGCAGTCTAAACAACC+AGG 0.529230 1_3:-32730233 None:intergenic
AGCAAAGTACTCTTAAGGCA+TGG 0.530894 1_3:+32731330 Msa0114710:CDS
GTGTTTAGGAGTACCCTTTG+TGG 0.534813 1_3:+32730677 Msa0114710:intron
ACATGCTGCAAGAACACGTT+CGG 0.537011 1_3:-32731030 None:intergenic
TAAGAGAATGTAAGAGTCCA+AGG 0.537565 1_3:-32731293 None:intergenic
TTCTCCTAAAGTTGCTCCTG+AGG 0.542888 1_3:+32731130 Msa0114710:CDS
AGAAGACAAGTAGTAAGAAG+AGG 0.543018 1_3:-32727990 None:intergenic
TCTTTCAAGAGCAAGTATGA+AGG 0.544555 1_3:+32728100 Msa0114710:CDS
GAACCTGAGATTCTAGTGGA+TGG 0.544943 1_3:+32730975 Msa0114710:CDS
ACCATTCTCTTGACATATGA+CGG 0.546843 1_3:-32730937 None:intergenic
TCAATCCACGAAAACGCCTA+CGG 0.549910 1_3:+32730900 Msa0114710:CDS
ATTTGTGCCGGCAAGTTCAA+CGG 0.550481 1_3:-32730751 None:intergenic
CCATTTAGCGAACCTTGCAC+CGG 0.555662 1_3:-32730835 None:intergenic
TGCAAGAAGTACTATGAAGC+CGG 0.557100 1_3:+32730816 Msa0114710:CDS
ACTTTCAGTACATAGAATGA+TGG 0.558514 1_3:-32731891 None:intergenic
ACTTTAGGAGAATCTGATCC+TGG 0.561618 1_3:-32731119 None:intergenic
GAACGGTTCGCAACAAAGCT+CGG 0.563519 1_3:-32731172 None:intergenic
TATCAAGGTAATGCTAACCT+TGG 0.568421 1_3:+32731437 Msa0114710:CDS
TCCTGGTATCAAGGTTGACA+AGG 0.571342 1_3:+32730725 Msa0114710:CDS
CATATGTCAAGAGAATGGTT+TGG 0.575303 1_3:+32730941 Msa0114710:CDS
TGGCGTGCCGTGCTAAAGAT+CGG 0.577059 1_3:+32730855 Msa0114710:CDS
AATGGAGAAACCACAACTCA+AGG 0.579845 1_3:+32730771 Msa0114710:CDS
GTCATCCAAACCTTGAGTTG+TGG 0.586628 1_3:-32730781 None:intergenic
AGTACTATGAAGCCGGTGCA+AGG 0.593122 1_3:+32730823 Msa0114710:CDS
ACTCAAGGTTTGGATGACCT+TGG 0.593476 1_3:+32730786 Msa0114710:CDS
TTCGCGAAGAGTACGTCTGT+TGG 0.596179 1_3:-32730195 None:intergenic
ACTTCTTGCACCTCTGACCA+AGG 0.600417 1_3:-32730803 None:intergenic
GTTTGGATGACCTTGGTCAG+AGG 0.601427 1_3:+32730793 Msa0114710:CDS
AAGCCTAATATGGTTACACC+AGG 0.609198 1_3:+32731101 Msa0114710:CDS
AAATACTAATATGTTAAAGA+GGG 0.613786 1_3:+32731497 Msa0114710:exon
TGTAGAACCTGAGATTCTAG+TGG 0.614806 1_3:+32730971 Msa0114710:CDS
AAAAGTGTAAAGCAGAAAGT+GGG 0.614949 1_3:+32731792 Msa0114710:three_prime_UTR
TCTTACATTCTCTTATGGAA+GGG 0.615325 1_3:+32731301 Msa0114710:CDS
ATTTGGACCGATCTTTAGCA+CGG 0.615328 1_3:-32730862 None:intergenic
GGAATCTGTAATACCTGCAG+CGG 0.618091 1_3:-32730294 None:intergenic
CAGTAGATTCATCAGCAGCA+AGG 0.619396 1_3:-32730124 None:intergenic
TTTCTTCAACACATCCACAA+AGG 0.625245 1_3:-32730691 None:intergenic
GTCTGGTGGACAAAGTGAAG+AGG 0.625664 1_3:+32731223 Msa0114710:CDS
AGTACTCTTAAGGCATGGGG+TGG 0.629413 1_3:+32731335 Msa0114710:CDS
GAAAACTATAGCTGGAACTG+CGG 0.632802 1_3:-32731198 None:intergenic
GGTTGTTTAGACTGCCTCAG+TGG 0.642712 1_3:+32730236 Msa0114710:CDS
TACCTTCAAGAAGAACATGA+TGG 0.642921 1_3:-32731070 None:intergenic
ATATGTTAAAGAGGGTTGTG+AGG 0.648981 1_3:+32731505 Msa0114710:exon
CAAAGTACTCTTAAGGCATG+GGG 0.654273 1_3:+32731332 Msa0114710:CDS
GGTAATGCTAACCTTGGTGA+TGG 0.655737 1_3:+32731443 Msa0114710:CDS
CCTGGTATCAAGGTTGACAA+GGG 0.660914 1_3:+32730726 Msa0114710:CDS
TGAGGCAGTCTAAACAACCA+GGG 0.687038 1_3:-32730232 None:intergenic
GCGATTCGCTAGCATCAATG+TGG 0.695493 1_3:+32730160 Msa0114710:CDS
GAGGCAGTCTAAACAACCAG+GGG 0.707381 1_3:-32730231 None:intergenic
ACTCTGAAGCACCATCACCA+AGG 0.713624 1_3:-32731454 None:intergenic
GGCATAACGAGCTAAACCGT+AGG 0.727129 1_3:-32730916 None:intergenic
CGAACAAGATAACACCACTG+AGG 0.795503 1_3:-32730250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTCAATACAT+AGG + chr1_3:32728167-32728186 Msa0114710:intron 10.0%
!! TTATTAAAAATTAGAAAGAA+AGG - chr1_3:32730502-32730521 None:intergenic 10.0%
!!! ATTTTTCAGAAACATATTTT+TGG + chr1_3:32729090-32729109 Msa0114710:intron 15.0%
!!! TTTTTCAGAAACATATTTTT+GGG + chr1_3:32729091-32729110 Msa0114710:intron 15.0%
!!! GTTTCTTTTACTATAAATAT+AGG + chr1_3:32729139-32729158 Msa0114710:intron 15.0%
!! TATCAGATTAAATATTCATA+TGG - chr1_3:32729712-32729731 None:intergenic 15.0%
!! AAATACTAATATGTTAAAGA+GGG + chr1_3:32731497-32731516 Msa0114710:exon 15.0%
!! TAAAAAAAGCTAAATTCAAA+GGG - chr1_3:32731849-32731868 None:intergenic 15.0%
!! ATGAGAAAGTAAAAAACAAT+GGG - chr1_3:32727915-32727934 None:intergenic 20.0%
!! AATGAGAAAGTAAAAAACAA+TGG - chr1_3:32727916-32727935 None:intergenic 20.0%
!!! TGAGTTTTGAAGATTTATAA+AGG - chr1_3:32727966-32727985 None:intergenic 20.0%
!!! TTCTAAAAGTACTAAAAAAG+AGG + chr1_3:32728499-32728518 Msa0114710:intron 20.0%
!! AAAAAGACAAATTGTGTATA+AGG + chr1_3:32728523-32728542 Msa0114710:intron 20.0%
!! AAAAGACAAATTGTGTATAA+GGG + chr1_3:32728524-32728543 Msa0114710:intron 20.0%
!! AAAAAGTAAGAGTAAAATAG+AGG + chr1_3:32728641-32728660 Msa0114710:intron 20.0%
!!! CAGATTTGTTACAATTTTAT+GGG + chr1_3:32729115-32729134 Msa0114710:intron 20.0%
!! AATTAAAATGTTTGACTCTT+TGG - chr1_3:32729770-32729789 None:intergenic 20.0%
!!! TTTGAAACGTTATAAACAAT+AGG - chr1_3:32730318-32730337 None:intergenic 20.0%
!!! TTTTAATAAATTCTTTCGTG+CGG + chr1_3:32730513-32730532 Msa0114710:intron 20.0%
!! CAAATACTAATATGTTAAAG+AGG + chr1_3:32731496-32731515 Msa0114710:exon 20.0%
!!! AATAGTGTTTGTTTTTGTTT+AGG + chr1_3:32731591-32731610 Msa0114710:three_prime_UTR 20.0%
!! AAAAAAAGCTAAATTCAAAG+GGG - chr1_3:32731848-32731867 None:intergenic 20.0%
!! CTAAAAAAAGCTAAATTCAA+AGG - chr1_3:32731850-32731869 None:intergenic 20.0%
!!! CTTTGAATTTAGCTTTTTTT+AGG + chr1_3:32731848-32731867 Msa0114710:three_prime_UTR 20.0%
! TCATAATTGTGTGATTTGAT+TGG + chr1_3:32728389-32728408 Msa0114710:intron 25.0%
! CTCAAGTAAAATATGAATTG+AGG + chr1_3:32728435-32728454 Msa0114710:intron 25.0%
!!! TCGAAATTTTGATGTCAAAT+AGG + chr1_3:32728567-32728586 Msa0114710:intron 25.0%
!!! CGAAATTTTGATGTCAAATA+GGG + chr1_3:32728568-32728587 Msa0114710:intron 25.0%
! CATTTCGTTTGACAAAATTA+CGG + chr1_3:32728803-32728822 Msa0114710:intron 25.0%
! CCATAAAATTGTAACAAATC+TGG - chr1_3:32729117-32729136 None:intergenic 25.0%
!!! CCAGATTTGTTACAATTTTA+TGG + chr1_3:32729114-32729133 Msa0114710:intron 25.0%
! GTTACAAAAGAGATTTCAAT+GGG - chr1_3:32729371-32729390 None:intergenic 25.0%
! AACTTAGTGTATGTTTGAAT+TGG - chr1_3:32729632-32729651 None:intergenic 25.0%
! GTTCGATTCATAAAACTAAA+GGG + chr1_3:32729670-32729689 Msa0114710:intron 25.0%
! AAAATTAGAAAGAAAGGACA+TGG - chr1_3:32730496-32730515 None:intergenic 25.0%
!! TAAGTTTGTTCATTGCATTA+AGG - chr1_3:32731262-32731281 None:intergenic 25.0%
! TAATGCAATGAACAAACTTA+AGG + chr1_3:32731262-32731281 Msa0114710:CDS 25.0%
! AATGCAATGAACAAACTTAA+GGG + chr1_3:32731263-32731282 Msa0114710:CDS 25.0%
!! TTGTGGTAAAGTATCAATAA+TGG + chr1_3:32731618-32731637 Msa0114710:three_prime_UTR 25.0%
!!! TTGGCATTTATTTTTCAACA+TGG + chr1_3:32731662-32731681 Msa0114710:three_prime_UTR 25.0%
!!! TTTTTTGTTACACACACTTT+TGG - chr1_3:32731776-32731795 None:intergenic 25.0%
! AAAAAAGCTAAATTCAAAGG+GGG - chr1_3:32731847-32731866 None:intergenic 25.0%
!!! GTTTTGTTTTGTGTGATGTT+TGG - chr1_3:32728023-32728042 None:intergenic 30.0%
! ATGTTACACTAGCTTCATTT+AGG + chr1_3:32728219-32728238 Msa0114710:intron 30.0%
ATGAATTGAGGTTTACGTTT+AGG + chr1_3:32728447-32728466 Msa0114710:intron 30.0%
AGGTTTACGTTTAGGTATAT+TGG + chr1_3:32728455-32728474 Msa0114710:intron 30.0%
GGTTTACGTTTAGGTATATT+GGG + chr1_3:32728456-32728475 Msa0114710:intron 30.0%
GTTTACGTTTAGGTATATTG+GGG + chr1_3:32728457-32728476 Msa0114710:intron 30.0%
! ATTTTTGCCAAAAATTACCG+TGG + chr1_3:32728859-32728878 Msa0114710:intron 30.0%
! CTATTTACCACGGTAATTTT+TGG - chr1_3:32728869-32728888 None:intergenic 30.0%
TTGTGAAAGTGACTCAAAAT+TGG + chr1_3:32728912-32728931 Msa0114710:intron 30.0%
! CTTTCAGCAAACATCAATTT+TGG - chr1_3:32728948-32728967 None:intergenic 30.0%
! TGTTTGCTGAAAGTACAAAT+CGG + chr1_3:32728955-32728974 Msa0114710:intron 30.0%
AAGGGTTTAGAAATCAAACT+AGG + chr1_3:32729203-32729222 Msa0114710:intron 30.0%
AGGGTTTAGAAATCAAACTA+GGG + chr1_3:32729204-32729223 Msa0114710:intron 30.0%
TTTGTATAGAGTTTGTCTCT+TGG + chr1_3:32729227-32729246 Msa0114710:intron 30.0%
CGTTACAAAAGAGATTTCAA+TGG - chr1_3:32729372-32729391 None:intergenic 30.0%
TAACGTTACTCATCATATAG+TGG + chr1_3:32729387-32729406 Msa0114710:intron 30.0%
! TTACTCATCATATAGTGGAA+CGG + chr1_3:32729392-32729411 Msa0114710:intron 30.0%
!! TGTTCCATACACTTTGATTT+TGG + chr1_3:32729533-32729552 Msa0114710:intron 30.0%
TCAAACATACACTAAGTTTG+TGG + chr1_3:32729634-32729653 Msa0114710:intron 30.0%
GGTTCGATTCATAAAACTAA+AGG + chr1_3:32729669-32729688 Msa0114710:intron 30.0%
TGATAGTAGAATGCAAACTT+TGG + chr1_3:32729727-32729746 Msa0114710:intron 30.0%
! TGAAAAGCTTAACGCAATTT+TGG + chr1_3:32729896-32729915 Msa0114710:intron 30.0%
!! AGTTTTGTACTTACTTCTTG+TGG + chr1_3:32729976-32729995 Msa0114710:intron 30.0%
ATTGAAATGCAAATGCATCA+GGG - chr1_3:32730591-32730610 None:intergenic 30.0%
AATTGAAATGCAAATGCATC+AGG - chr1_3:32730592-32730611 None:intergenic 30.0%
ACAGTTGAGAAATAAGTTAG+AGG - chr1_3:32730659-32730678 None:intergenic 30.0%
! CTTATTTCTCAACTGTGTTT+AGG + chr1_3:32730663-32730682 Msa0114710:intron 30.0%
!!! TACTCTTTTGAAGCCTAATA+TGG + chr1_3:32731091-32731110 Msa0114710:CDS 30.0%
TCTTACATTCTCTTATGGAA+GGG + chr1_3:32731301-32731320 Msa0114710:CDS 30.0%
!!! GTGTTTGTTTTTGTTTAGGT+TGG + chr1_3:32731595-32731614 Msa0114710:three_prime_UTR 30.0%
GTTGTGTGAAAAATGTATGA+TGG - chr1_3:32731710-32731729 None:intergenic 30.0%
! AAAAAGTGTAAAGCAGAAAG+TGG + chr1_3:32731791-32731810 Msa0114710:three_prime_UTR 30.0%
! AAAAGTGTAAAGCAGAAAGT+GGG + chr1_3:32731792-32731811 Msa0114710:three_prime_UTR 30.0%
! TAGAATGATGGAAAAACAAG+TGG - chr1_3:32731882-32731901 None:intergenic 30.0%
ACTTTCAGTACATAGAATGA+TGG - chr1_3:32731894-32731913 None:intergenic 30.0%
AGAAGACAAGTAGTAAGAAG+AGG - chr1_3:32727993-32728012 None:intergenic 35.0%
CTTGAAAGAAGACATGTTAG+AGG - chr1_3:32728089-32728108 None:intergenic 35.0%
TCTTTCAAGAGCAAGTATGA+AGG + chr1_3:32728100-32728119 Msa0114710:CDS 35.0%
TAGGACATGTTTACCTTTGT+TGG + chr1_3:32728186-32728205 Msa0114710:intron 35.0%
CATGAATGATCAACCAACAA+AGG - chr1_3:32728202-32728221 None:intergenic 35.0%
! CACTAGCTTCATTTAGGTAT+TGG + chr1_3:32728225-32728244 Msa0114710:intron 35.0%
TATACTCTGATGATCCTAGA+TGG + chr1_3:32728294-32728313 Msa0114710:intron 35.0%
! GGAGAACTAGTTGAGTATTT+TGG + chr1_3:32728410-32728429 Msa0114710:intron 35.0%
!! ACTCGTTTTAAGCAAGATTC+CGG + chr1_3:32728699-32728718 Msa0114710:intron 35.0%
GACAAAATTACGGTTGAATG+TGG + chr1_3:32728813-32728832 Msa0114710:intron 35.0%
AGTGACTCAAAATTGGAGTT+TGG + chr1_3:32728919-32728938 Msa0114710:intron 35.0%
AAAATAACAGCACGCGAAAT+CGG - chr1_3:32729075-32729094 None:intergenic 35.0%
TCTCTCAATAGTCTGATACA+AGG - chr1_3:32729165-32729184 None:intergenic 35.0%
AGACTATTGAGAGAGATAGA+GGG + chr1_3:32729171-32729190 Msa0114710:intron 35.0%
! TTTGAAGGTTGATTCACCTT+GGG + chr1_3:32729263-32729282 Msa0114710:intron 35.0%
AATCCTAATAGTGTTTCCCA+AGG - chr1_3:32729282-32729301 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr1_3:32729290-32729309 Msa0114710:intron 35.0%
!! AAGAATTTGTTGACCCAGTT+CGG - chr1_3:32729454-32729473 None:intergenic 35.0%
!!! TCGCTGTTGTTTTCTACTTT+TGG + chr1_3:32729496-32729515 Msa0114710:intron 35.0%
GCAACCAAAATCAAAGTGTA+TGG - chr1_3:32729540-32729559 None:intergenic 35.0%
! TCCACACATCAAGTTGTTAT+TGG + chr1_3:32729575-32729594 Msa0114710:intron 35.0%
ACCAATAACAACTTGATGTG+TGG - chr1_3:32729579-32729598 None:intergenic 35.0%
AACATACACTAAGTTTGTGG+TGG + chr1_3:32729637-32729656 Msa0114710:intron 35.0%
! AGTTTGTGGTGGAAGAAATA+AGG + chr1_3:32729648-32729667 Msa0114710:intron 35.0%
TAGATAATCCGTGCAACAAA+CGG + chr1_3:32729835-32729854 Msa0114710:intron 35.0%
!! AATTTTCTCCGTTTGTTGCA+CGG - chr1_3:32729846-32729865 None:intergenic 35.0%
TGTGAATCAAAATGAGTGCT+AGG + chr1_3:32729946-32729965 Msa0114710:intron 35.0%
ATTGCAATCAAACAAGTGCT+AGG + chr1_3:32730343-32730362 Msa0114710:intron 35.0%
TTAGAAAGAAAGGACATGGA+AGG - chr1_3:32730492-32730511 None:intergenic 35.0%
TTCTTCAACACATCCACAAA+GGG - chr1_3:32730693-32730712 None:intergenic 35.0%
TTTCTTCAACACATCCACAA+AGG - chr1_3:32730694-32730713 None:intergenic 35.0%
ACCATTCTCTTGACATATGA+CGG - chr1_3:32730940-32730959 None:intergenic 35.0%
CATATGTCAAGAGAATGGTT+TGG + chr1_3:32730941-32730960 Msa0114710:CDS 35.0%
AGAATCTCAGGTTCTACAAT+TGG - chr1_3:32730969-32730988 None:intergenic 35.0%
TACCTTCAAGAAGAACATGA+TGG - chr1_3:32731073-32731092 None:intergenic 35.0%
TAAGAGAATGTAAGAGTCCA+AGG - chr1_3:32731296-32731315 None:intergenic 35.0%
TGGACTCTTACATTCTCTTA+TGG + chr1_3:32731296-32731315 Msa0114710:CDS 35.0%
CTCTTACATTCTCTTATGGA+AGG + chr1_3:32731300-32731319 Msa0114710:CDS 35.0%
! ACTTCAGCAAAGTACTCTTA+AGG + chr1_3:32731325-32731344 Msa0114710:CDS 35.0%
TATCAAGGTAATGCTAACCT+TGG + chr1_3:32731437-32731456 Msa0114710:CDS 35.0%
TTCAGAGTCTCTTCATGTTA+AGG + chr1_3:32731469-32731488 Msa0114710:CDS 35.0%
ATATGTTAAAGAGGGTTGTG+AGG + chr1_3:32731505-32731524 Msa0114710:exon 35.0%
!!! TTTTGGAGTTGTATGCATCA+TGG + chr1_3:32731543-32731562 Msa0114710:three_prime_UTR 35.0%
AGTTGTATGCATCATGGTTA+TGG + chr1_3:32731549-32731568 Msa0114710:three_prime_UTR 35.0%
!!! TGGTTATGGTGCTATTTTGT+AGG + chr1_3:32731563-32731582 Msa0114710:three_prime_UTR 35.0%
!!! GGTTATGGTGCTATTTTGTA+GGG + chr1_3:32731564-32731583 Msa0114710:three_prime_UTR 35.0%
!!! GTTTTTGTTTAGGTTGGTTG+TGG + chr1_3:32731601-32731620 Msa0114710:three_prime_UTR 35.0%
TGGAAAAACAAGTGGAGAAA+AGG - chr1_3:32731874-32731893 None:intergenic 35.0%
ACACTCTTCTCTATCCATCT+AGG - chr1_3:32728311-32728330 None:intergenic 40.0%
AATCGCATTCTATCAGCTAG+TGG - chr1_3:32728746-32728765 None:intergenic 40.0%
TTCTGTTAGCAACTAGCAGT+TGG + chr1_3:32728764-32728783 Msa0114710:intron 40.0%
GGCAGAATCACTATTTACCA+CGG - chr1_3:32728879-32728898 None:intergenic 40.0%
TTTCACAACAGCAGCGATTA+TGG - chr1_3:32728900-32728919 None:intergenic 40.0%
GACTCAAAATTGGAGTTTGG+AGG + chr1_3:32728922-32728941 Msa0114710:intron 40.0%
! TTGCTGAAAGTACAAATCGG+TGG + chr1_3:32728958-32728977 Msa0114710:intron 40.0%
GCTTTCTGTTCGGGAAAAAT+CGG + chr1_3:32729025-32729044 Msa0114710:intron 40.0%
CAGACTATTGAGAGAGATAG+AGG + chr1_3:32729170-32729189 Msa0114710:intron 40.0%
GACTATTGAGAGAGATAGAG+GGG + chr1_3:32729172-32729191 Msa0114710:intron 40.0%
ACTATTGAGAGAGATAGAGG+GGG + chr1_3:32729173-32729192 Msa0114710:intron 40.0%
TTGTCTCTTGGCAACAAACT+AGG + chr1_3:32729239-32729258 Msa0114710:intron 40.0%
TGTCTCTTGGCAACAAACTA+GGG + chr1_3:32729240-32729259 Msa0114710:intron 40.0%
! GTTTGAAGGTTGATTCACCT+TGG + chr1_3:32729262-32729281 Msa0114710:intron 40.0%
TCACCTTGGGAAACACTATT+AGG + chr1_3:32729276-32729295 Msa0114710:intron 40.0%
AGGATTGAGTCTCTTGGTTA+CGG + chr1_3:32729296-32729315 Msa0114710:intron 40.0%
! TCATCATATAGTGGAACGGA+GGG + chr1_3:32729396-32729415 Msa0114710:intron 40.0%
GAAAACAACAGCGAGAGAAA+AGG - chr1_3:32729490-32729509 None:intergenic 40.0%
! ATTGCCAATGCTGCTTACAT+TGG + chr1_3:32730083-32730102 Msa0114710:CDS 40.0%
GATGAATCTACTGGCACAAT+TGG + chr1_3:32730134-32730153 Msa0114710:CDS 40.0%
CTATATCAAAAAACCGCTGC+AGG + chr1_3:32730281-32730300 Msa0114710:CDS 40.0%
TAGATGATTGATGAGGTCTG+AGG + chr1_3:32730536-32730555 Msa0114710:intron 40.0%
AATGCAAATGCATCAGGGTA+AGG - chr1_3:32730586-32730605 None:intergenic 40.0%
AATGGAGAAACCACAACTCA+AGG + chr1_3:32730771-32730790 Msa0114710:CDS 40.0%
AGAAACCACAACTCAAGGTT+TGG + chr1_3:32730776-32730795 Msa0114710:CDS 40.0%
!! TGCAAGAAGTACTATGAAGC+CGG + chr1_3:32730816-32730835 Msa0114710:CDS 40.0%
ATTTGGACCGATCTTTAGCA+CGG - chr1_3:32730865-32730884 None:intergenic 40.0%
TGTAGAACCTGAGATTCTAG+TGG + chr1_3:32730971-32730990 Msa0114710:CDS 40.0%
! AGCACATTTTGCGATATCGT+GGG - chr1_3:32731003-32731022 None:intergenic 40.0%
TGTTCTTGCAGCATGTTACA+AGG + chr1_3:32731037-32731056 Msa0114710:CDS 40.0%
GACCATCATGTTCTTCTTGA+AGG + chr1_3:32731068-32731087 Msa0114710:CDS 40.0%
AAGCCTAATATGGTTACACC+AGG + chr1_3:32731101-32731120 Msa0114710:CDS 40.0%
GATCCTGGTGTAACCATATT+AGG - chr1_3:32731107-32731126 None:intergenic 40.0%
! ACTTTAGGAGAATCTGATCC+TGG - chr1_3:32731122-32731141 None:intergenic 40.0%
ATAACCTCAGGAGCAACTTT+AGG - chr1_3:32731137-32731156 None:intergenic 40.0%
GAAAACTATAGCTGGAACTG+CGG - chr1_3:32731201-32731220 None:intergenic 40.0%
CCAGACAAGAAAACTATAGC+TGG - chr1_3:32731209-32731228 None:intergenic 40.0%
! CCAGCTATAGTTTTCTTGTC+TGG + chr1_3:32731206-32731225 Msa0114710:CDS 40.0%
! GCTATAGTTTTCTTGTCTGG+TGG + chr1_3:32731209-32731228 Msa0114710:CDS 40.0%
AACTTAAGGGAAAGAAGCCT+TGG + chr1_3:32731276-32731295 Msa0114710:CDS 40.0%
! AGCAAAGTACTCTTAAGGCA+TGG + chr1_3:32731330-32731349 Msa0114710:CDS 40.0%
! GCAAAGTACTCTTAAGGCAT+GGG + chr1_3:32731331-32731350 Msa0114710:CDS 40.0%
! CAAAGTACTCTTAAGGCATG+GGG + chr1_3:32731332-32731351 Msa0114710:CDS 40.0%
GCAACTCTTGGAACTTATCA+AGG + chr1_3:32731422-32731441 Msa0114710:CDS 40.0%
!! GGCTCTGATTGAACTTGTTT+TGG + chr1_3:32731526-32731545 Msa0114710:three_prime_UTR 40.0%
ATAATGGCTTCAAGCTGAAC+TGG + chr1_3:32731634-32731653 Msa0114710:three_prime_UTR 40.0%
TAACCAATCCCAAGCAAGAC+CGG - chr1_3:32728721-32728740 None:intergenic 45.0%
TCCCAAAAGGCAGCCAAAAT+CGG - chr1_3:32729004-32729023 None:intergenic 45.0%
!! CTTTTGGGAGGCTTTCTGTT+CGG + chr1_3:32729015-32729034 Msa0114710:intron 45.0%
!! TTTTGGGAGGCTTTCTGTTC+GGG + chr1_3:32729016-32729035 Msa0114710:intron 45.0%
TTCTGTTCGGGAAAAATCGG+TGG + chr1_3:32729028-32729047 Msa0114710:intron 45.0%
GGCAACAAACTAGGGTTTGA+AGG + chr1_3:32729248-32729267 Msa0114710:intron 45.0%
GGATTGAGTCTCTTGGTTAC+GGG + chr1_3:32729297-32729316 Msa0114710:intron 45.0%
!!! GCTGGGTTTTGGGTAGAATT+AGG + chr1_3:32729325-32729344 Msa0114710:intron 45.0%
!!! GGGTTTTGGGTAGAATTAGG+CGG + chr1_3:32729328-32729347 Msa0114710:intron 45.0%
!!! GGTTTTGGGTAGAATTAGGC+GGG + chr1_3:32729329-32729348 Msa0114710:intron 45.0%
! CTCATCATATAGTGGAACGG+AGG + chr1_3:32729395-32729414 Msa0114710:intron 45.0%
TCCAAATTGACCTAGTCTGG+GGG - chr1_3:32729431-32729450 None:intergenic 45.0%
GTCCAAATTGACCTAGTCTG+GGG - chr1_3:32729432-32729451 None:intergenic 45.0%
GGTCCAAATTGACCTAGTCT+GGG - chr1_3:32729433-32729452 None:intergenic 45.0%
TAGGTCAATTTGGACCGAAC+TGG + chr1_3:32729437-32729456 Msa0114710:intron 45.0%
AGGTCAATTTGGACCGAACT+GGG + chr1_3:32729438-32729457 Msa0114710:intron 45.0%
CAACTTGATGTGTGGAGCAA+GGG - chr1_3:32729571-32729590 None:intergenic 45.0%
ACAACTTGATGTGTGGAGCA+AGG - chr1_3:32729572-32729591 None:intergenic 45.0%
AGAGCCAATGTAAGCAGCAT+TGG - chr1_3:32730090-32730109 None:intergenic 45.0%
!! TTACATTGGCTCTCCTGGAA+AGG + chr1_3:32730097-32730116 Msa0114710:CDS 45.0%
!! TACATTGGCTCTCCTGGAAA+GGG + chr1_3:32730098-32730117 Msa0114710:CDS 45.0%
CAGTAGATTCATCAGCAGCA+AGG - chr1_3:32730127-32730146 None:intergenic 45.0%
CTTGCTGCTGATGAATCTAC+TGG + chr1_3:32730125-32730144 Msa0114710:CDS 45.0%
TGAGGCAGTCTAAACAACCA+GGG - chr1_3:32730235-32730254 None:intergenic 45.0%
CGAACAAGATAACACCACTG+AGG - chr1_3:32730253-32730272 None:intergenic 45.0%
GGAATCTGTAATACCTGCAG+CGG - chr1_3:32730297-32730316 None:intergenic 45.0%
GAAAGGACATGGAAGGACTA+AGG - chr1_3:32730485-32730504 None:intergenic 45.0%
! GTCTGAGGTGTCAACTTAGT+TGG + chr1_3:32730551-32730570 Msa0114710:intron 45.0%
!! GTGTTTAGGAGTACCCTTTG+TGG + chr1_3:32730677-32730696 Msa0114710:intron 45.0%
GTGGATGTGTTGAAGAAAGC+TGG + chr1_3:32730696-32730715 Msa0114710:CDS 45.0%
AAGAAAGCTGGAGTTCTTCC+TGG + chr1_3:32730708-32730727 Msa0114710:CDS 45.0%
TGGAGTTCTTCCTGGTATCA+AGG + chr1_3:32730716-32730735 Msa0114710:CDS 45.0%
TCCTGGTATCAAGGTTGACA+AGG + chr1_3:32730725-32730744 Msa0114710:CDS 45.0%
CCTGGTATCAAGGTTGACAA+GGG + chr1_3:32730726-32730745 Msa0114710:CDS 45.0%
! ATTTGTGCCGGCAAGTTCAA+CGG - chr1_3:32730754-32730773 None:intergenic 45.0%
TGTGGTTTCTCCATTTGTGC+CGG - chr1_3:32730766-32730785 None:intergenic 45.0%
! GTCATCCAAACCTTGAGTTG+TGG - chr1_3:32730784-32730803 None:intergenic 45.0%
ACTCAAGGTTTGGATGACCT+TGG + chr1_3:32730786-32730805 Msa0114710:CDS 45.0%
GACAAGGGAGATGGTTCATT+TGG - chr1_3:32730882-32730901 None:intergenic 45.0%
!! GCGTTTTCGTGGATTGACAA+GGG - chr1_3:32730897-32730916 None:intergenic 45.0%
TCAATCCACGAAAACGCCTA+CGG + chr1_3:32730900-32730919 Msa0114710:CDS 45.0%
GCCGTCATATGTCAAGAGAA+TGG + chr1_3:32730936-32730955 Msa0114710:CDS 45.0%
GAACCTGAGATTCTAGTGGA+TGG + chr1_3:32730975-32730994 Msa0114710:CDS 45.0%
GATCCATCCACTAGAATCTC+AGG - chr1_3:32730981-32731000 None:intergenic 45.0%
! CAGCACATTTTGCGATATCG+TGG - chr1_3:32731004-32731023 None:intergenic 45.0%
ACATGCTGCAAGAACACGTT+CGG - chr1_3:32731033-32731052 None:intergenic 45.0%
TTCTCCTAAAGTTGCTCCTG+AGG + chr1_3:32731130-32731149 Msa0114710:CDS 45.0%
AGCAATGCAGCTTGAGCTTT+AGG - chr1_3:32731377-32731396 None:intergenic 45.0%
CTCAAGCTGCATTGCTTGTT+AGG + chr1_3:32731381-32731400 Msa0114710:CDS 45.0%
GCAAACTCAGAAGCAACTCT+TGG + chr1_3:32731410-32731429 Msa0114710:CDS 45.0%
GGTAATGCTAACCTTGGTGA+TGG + chr1_3:32731443-32731462 Msa0114710:CDS 45.0%
!! TCAAGCTGAACTGGCTTGAT+TGG + chr1_3:32731643-32731662 Msa0114710:three_prime_UTR 45.0%
AGCAAGATTCCGGTCTTGCT+TGG + chr1_3:32728709-32728728 Msa0114710:intron 50.0%
GCAAGATTCCGGTCTTGCTT+GGG + chr1_3:32728710-32728729 Msa0114710:intron 50.0%
ATTCCGGTCTTGCTTGGGAT+TGG + chr1_3:32728715-32728734 Msa0114710:intron 50.0%
GTACAAATCGGTGGCCGATT+TGG + chr1_3:32728967-32728986 Msa0114710:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG + chr1_3:32728975-32728994 Msa0114710:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG + chr1_3:32728978-32728997 Msa0114710:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG - chr1_3:32728984-32729003 None:intergenic 50.0%
!! GGAAAATCGGTGGCCGATTT+TGG + chr1_3:32728988-32729007 Msa0114710:intron 50.0%
!!! GCCGATTTTGGCTGCCTTTT+GGG + chr1_3:32729000-32729019 Msa0114710:intron 50.0%
!!! GATTTTGGCTGCCTTTTGGG+AGG + chr1_3:32729003-32729022 Msa0114710:intron 50.0%
CGAACAGAAAGCCTCCCAAA+AGG - chr1_3:32729017-32729036 None:intergenic 50.0%
AGATAGAGGGGGCTGAAACA+AGG + chr1_3:32729184-32729203 Msa0114710:intron 50.0%
GATAGAGGGGGCTGAAACAA+GGG + chr1_3:32729185-32729204 Msa0114710:intron 50.0%
AGTCTCTTGGTTACGGGAAG+AGG + chr1_3:32729303-32729322 Msa0114710:intron 50.0%
TCCCCCAGACTAGGTCAATT+TGG + chr1_3:32729427-32729446 Msa0114710:intron 50.0%
CGGTCCAAATTGACCTAGTC+TGG - chr1_3:32729434-32729453 None:intergenic 50.0%
GCGATTCGCTAGCATCAATG+TGG + chr1_3:32730160-32730179 Msa0114710:CDS 50.0%
! TTCGCGAAGAGTACGTCTGT+TGG - chr1_3:32730198-32730217 None:intergenic 50.0%
GAGGCAGTCTAAACAACCAG+GGG - chr1_3:32730234-32730253 None:intergenic 50.0%
CTGAGGCAGTCTAAACAACC+AGG - chr1_3:32730236-32730255 None:intergenic 50.0%
GGTTGTTTAGACTGCCTCAG+TGG + chr1_3:32730236-32730255 Msa0114710:CDS 50.0%
CGTGCGGTAGATGATTGATG+AGG + chr1_3:32730529-32730548 Msa0114710:intron 50.0%
CCCTTGTCAACCTTGATACC+AGG - chr1_3:32730729-32730748 None:intergenic 50.0%
AAGGGAACCGTTGAACTTGC+CGG + chr1_3:32730744-32730763 Msa0114710:CDS 50.0%
GTTGAACTTGCCGGCACAAA+TGG + chr1_3:32730753-32730772 Msa0114710:CDS 50.0%
GTTTGGATGACCTTGGTCAG+AGG + chr1_3:32730793-32730812 Msa0114710:CDS 50.0%
ACTTCTTGCACCTCTGACCA+AGG - chr1_3:32730806-32730825 None:intergenic 50.0%
AGTACTATGAAGCCGGTGCA+AGG + chr1_3:32730823-32730842 Msa0114710:CDS 50.0%
CCATTTAGCGAACCTTGCAC+CGG - chr1_3:32730838-32730857 None:intergenic 50.0%
! TCGTGGATTGACAAGGGAGA+TGG - chr1_3:32730891-32730910 None:intergenic 50.0%
!! GGCGTTTTCGTGGATTGACA+AGG - chr1_3:32730898-32730917 None:intergenic 50.0%
! CTAAACCGTAGGCGTTTTCG+TGG - chr1_3:32730908-32730927 None:intergenic 50.0%
GGCATAACGAGCTAAACCGT+AGG - chr1_3:32730919-32730938 None:intergenic 50.0%
GTGTGTTGGGCTATAACCTC+AGG - chr1_3:32731149-32731168 None:intergenic 50.0%
CAAAGCTCGGACTGTGTGTT+GGG - chr1_3:32731162-32731181 None:intergenic 50.0%
ACAAAGCTCGGACTGTGTGT+TGG - chr1_3:32731163-32731182 None:intergenic 50.0%
GAACGGTTCGCAACAAAGCT+CGG - chr1_3:32731175-32731194 None:intergenic 50.0%
! GTCTGGTGGACAAAGTGAAG+AGG + chr1_3:32731223-32731242 Msa0114710:CDS 50.0%
AGTACTCTTAAGGCATGGGG+TGG + chr1_3:32731335-32731354 Msa0114710:CDS 50.0%
!! ACTCTGAAGCACCATCACCA+AGG - chr1_3:32731457-32731476 None:intergenic 50.0%
!!! GGCCGATTTTGGCTGCCTTT+TGG + chr1_3:32728999-32729018 Msa0114710:intron 55.0%
!! GGTGGCCGATTTTCAGAGCA+CGG + chr1_3:32729046-32729065 Msa0114710:intron 55.0%
!! GGCCACCGTGCTCTGAAAAT+CGG - chr1_3:32729054-32729073 None:intergenic 55.0%
TCTTGGTTACGGGAAGAGGC+TGG + chr1_3:32729307-32729326 Msa0114710:intron 55.0%
CTTGGTTACGGGAAGAGGCT+GGG + chr1_3:32729308-32729327 Msa0114710:intron 55.0%
! TACGGGAAGAGGCTGGGTTT+TGG + chr1_3:32729314-32729333 Msa0114710:intron 55.0%
! ACGGGAAGAGGCTGGGTTTT+GGG + chr1_3:32729315-32729334 Msa0114710:intron 55.0%
!! GCTGCTTACATTGGCTCTCC+TGG + chr1_3:32730092-32730111 Msa0114710:CDS 55.0%
GCAGCAAGGATACCCTTTCC+AGG - chr1_3:32730113-32730132 None:intergenic 55.0%
GAACTCTTGTTCACTGCCCC+TGG + chr1_3:32730215-32730234 Msa0114710:CDS 55.0%
CCGGTGCAAGGTTCGCTAAA+TGG + chr1_3:32730835-32730854 Msa0114710:CDS 55.0%
TGGCGTGCCGTGCTAAAGAT+CGG + chr1_3:32730855-32730874 Msa0114710:CDS 55.0%
ACTATAGCTGGAACTGCGGC+AGG - chr1_3:32731197-32731216 None:intergenic 55.0%
!! GGCCGATTTTCAGAGCACGG+TGG + chr1_3:32729049-32729068 Msa0114710:intron 60.0%
AGCTGGAACTGCGGCAGGAA+CGG - chr1_3:32731192-32731211 None:intergenic 60.0%
GCTGCTCTCTCCCCCAGACT+AGG + chr1_3:32729418-32729437 Msa0114710:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 32727903 32731914 32727903 ID=Msa0114710;Name=Msa0114710
chr1_3 mRNA 32727903 32731914 32727903 ID=Msa0114710-mRNA-1;Parent=Msa0114710;Name=Msa0114710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=191|1|1|1|0.5|0.66|3|409|358
chr1_3 exon 32727903 32728121 32727903 ID=Msa0114710-mRNA-1:exon:10379;Parent=Msa0114710-mRNA-1
chr1_3 exon 32730075 32730302 32730075 ID=Msa0114710-mRNA-1:exon:10380;Parent=Msa0114710-mRNA-1
chr1_3 exon 32730685 32731914 32730685 ID=Msa0114710-mRNA-1:exon:10381;Parent=Msa0114710-mRNA-1
chr1_3 five_prime_UTR 32727903 32728093 32727903 ID=Msa0114710-mRNA-1:five_prime_utr;Parent=Msa0114710-mRNA-1
chr1_3 CDS 32728094 32728121 32728094 ID=Msa0114710-mRNA-1:cds;Parent=Msa0114710-mRNA-1
chr1_3 CDS 32730075 32730302 32730075 ID=Msa0114710-mRNA-1:cds;Parent=Msa0114710-mRNA-1
chr1_3 CDS 32730685 32731505 32730685 ID=Msa0114710-mRNA-1:cds;Parent=Msa0114710-mRNA-1
chr1_3 three_prime_UTR 32731506 32731914 32731506 ID=Msa0114710-mRNA-1:three_prime_utr;Parent=Msa0114710-mRNA-1
Gene Sequence

>Msa0114710

ATGTCTTCTTTCAAGAGCAAGTATGAAGATGAACTCATTGCCAATGCTGCTTACATTGGCTCTCCTGGAAAGGGTATCCTTGCTGCTGATGAATCTACTGGCACAATTGGAAAGCGATTCGCTAGCATCAATGTGGAGAATGTTGAAGCCAACAGACGTACTCTTCGCGAACTCTTGTTCACTGCCCCTGGTTGTTTAGACTGCCTCAGTGGTGTTATCTTGTTCGAAGAAACACTATATCAAAAAACCGCTGCAGGAGTACCCTTTGTGGATGTGTTGAAGAAAGCTGGAGTTCTTCCTGGTATCAAGGTTGACAAGGGAACCGTTGAACTTGCCGGCACAAATGGAGAAACCACAACTCAAGGTTTGGATGACCTTGGTCAGAGGTGCAAGAAGTACTATGAAGCCGGTGCAAGGTTCGCTAAATGGCGTGCCGTGCTAAAGATCGGTCCAAATGAACCATCTCCCTTGTCAATCCACGAAAACGCCTACGGTTTAGCTCGTTATGCCGTCATATGTCAAGAGAATGGTTTGGTTCCAATTGTAGAACCTGAGATTCTAGTGGATGGATCCCACGATATCGCAAAATGTGCTGATGTAACCGAACGTGTTCTTGCAGCATGTTACAAGGCTCTAAGTGACCATCATGTTCTTCTTGAAGGTACTCTTTTGAAGCCTAATATGGTTACACCAGGATCAGATTCTCCTAAAGTTGCTCCTGAGGTTATAGCCCAACACACAGTCCGAGCTTTGTTGCGAACCGTTCCTGCCGCAGTTCCAGCTATAGTTTTCTTGTCTGGTGGACAAAGTGAAGAGGAAGCATCTGTTAACCTTAATGCAATGAACAAACTTAAGGGAAAGAAGCCTTGGACTCTTACATTCTCTTATGGAAGGGCACTTCAGCAAAGTACTCTTAAGGCATGGGGTGGAAAAGATGAAAACATTCCTAAAGCTCAAGCTGCATTGCTTGTTAGGTGTAAAGCAAACTCAGAAGCAACTCTTGGAACTTATCAAGGTAATGCTAACCTTGGTGATGGTGCTTCAGAGTCTCTTCATGTTAAGGACTACAAATACTAA
Protein sequence

>Msa0114710

MSSFKSKYEDELIANAAYIGSPGKGILAADESTGTIGKRFASINVENVEANRRTLRELLFTAPGCLDCLSGVILFEETLYQKTAAGVPFVDVLKKAGVLPGIKVDKGTVELAGTNGETTTQGLDDLGQRCKKYYEAGARFAKWRAVLKIGPNEPSPLSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIAKCADVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDSPKVAPEVIAQHTVRALLRTVPAAVPAIVFLSGGQSEEEASVNLNAMNKLKGKKPWTLTFSYGRALQQSTLKAWGGKDENIPKAQAALLVRCKANSEATLGTYQGNANLGDGASESLHVKDYKY*