Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116310 | XP_013469076.1 | 98.140 | 484 | 9 | 0 | 1 | 484 | 1 | 484 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116310 | sp|F4HZG9|ICP55_ARATH | 68.657 | 469 | 144 | 2 | 1 | 469 | 1 | 466 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116310 | A0A072VM73 | 98.140 | 484 | 9 | 0 | 1 | 484 | 1 | 484 | 0.0 | 993 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116310 | Msa0769390 | 0.810051 | 1.396881e-50 | -8.615850e-47 |
| Msa0116310 | Msa0832370 | 0.807342 | 5.297462e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116310 | MtrunA17_Chr1g0192911 | 98.140 | 484 | 9 | 0 | 1 | 484 | 1 | 484 | 0.0 | 993 |
| Msa0116310 | MtrunA17_Chr8g0389291 | 26.793 | 474 | 284 | 16 | 51 | 464 | 8 | 478 | 9.94e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116310 | AT1G09300.1 | 68.657 | 469 | 144 | 2 | 1 | 469 | 1 | 466 | 0.0 | 689 |
| Msa0116310 | AT1G09300.2 | 70.794 | 428 | 123 | 1 | 42 | 469 | 10 | 435 | 0.0 | 651 |
| Msa0116310 | AT4G29490.1 | 25.647 | 425 | 257 | 15 | 93 | 464 | 59 | 477 | 1.23e-37 | 144 |
Find 167 sgRNAs with CRISPR-Local
Find 636 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAGCTCTCAAGTTATTT+TGG | 0.237616 | 1_3:-35227399 | None:intergenic |
| CTCACATAAGGTTTGGCTTC+TGG | 0.259772 | 1_3:-35219588 | None:intergenic |
| AACTTGTATTCTACAATCTT+TGG | 0.266518 | 1_3:+35227547 | Msa0116310:three_prime_UTR |
| TGAATTTGCTTCACTTCTTT+CGG | 0.281191 | 1_3:-35227334 | None:intergenic |
| ACCAATGTCATGCCCTAAAA+TGG | 0.283309 | 1_3:-35219550 | None:intergenic |
| TAGAAGTTGGGTTCAGCTTA+TGG | 0.298215 | 1_3:-35223466 | None:intergenic |
| GAGGAACCCCTTATCATATC+TGG | 0.302925 | 1_3:-35220725 | None:intergenic |
| AGAGGGTTTAAGAGAGTAAG+AGG | 0.305313 | 1_3:-35218123 | None:intergenic |
| TTATTGATGATCTTATAAAA+TGG | 0.305849 | 1_3:+35227722 | Msa0116310:three_prime_UTR |
| ACATCTGTCATCATCTTTAC+TGG | 0.311255 | 1_3:-35219456 | None:intergenic |
| AATTAGCATTTGCAGGTTCT+AGG | 0.321480 | 1_3:+35218368 | Msa0116310:intron |
| GCCGATTACTCATATATTAC+AGG | 0.336669 | 1_3:+35219504 | Msa0116310:CDS |
| ACCTCGTTCAACTTTCTCAT+TGG | 0.343552 | 1_3:-35220478 | None:intergenic |
| GCATCTTGTCGAAATGTATA+AGG | 0.350875 | 1_3:-35219483 | None:intergenic |
| ATTGATCCAGGTCACTATCT+AGG | 0.354401 | 1_3:+35223613 | Msa0116310:intron |
| AATTTGTCTAGGATGTGATT+TGG | 0.363924 | 1_3:+35220395 | Msa0116310:intron |
| CTTTCGGAATTGATGCTGTT+AGG | 0.367090 | 1_3:-35227318 | None:intergenic |
| GAAGTGTTATACATTATTCT+AGG | 0.368162 | 1_3:+35221424 | Msa0116310:CDS |
| GTCCATGTGCATTAAAGAAC+TGG | 0.371223 | 1_3:+35227434 | Msa0116310:three_prime_UTR |
| TTGTGAACTGATAAAGTAGT+AGG | 0.373355 | 1_3:+35227648 | Msa0116310:three_prime_UTR |
| ATCTGCATCAATTGCTTGTC+AGG | 0.376334 | 1_3:+35220904 | Msa0116310:CDS |
| ATGATAGCCAAACTCTTCTC+TGG | 0.383373 | 1_3:-35219423 | None:intergenic |
| GAGATTCTCATTACAGAAAC+AGG | 0.389989 | 1_3:+35226206 | Msa0116310:CDS |
| TACAATCTTTGGTCGGGAAG+GGG | 0.391402 | 1_3:+35227558 | Msa0116310:three_prime_UTR |
| CTGTTTGTGTGAAAATGTTT+TGG | 0.397576 | 1_3:-35218242 | None:intergenic |
| TTCAATCCCGTGGTTGGTGG+TGG | 0.398757 | 1_3:+35221393 | Msa0116310:CDS |
| CATGTTTGGCAGATTAAAGA+TGG | 0.406377 | 1_3:+35221518 | Msa0116310:intron |
| AAGCTGAACCCAACTTCTAT+AGG | 0.407794 | 1_3:+35223470 | Msa0116310:CDS |
| GCATGGAATATGCAGCAATT+AGG | 0.410124 | 1_3:-35227680 | None:intergenic |
| ATGAGAGGTGCGCAGCGAAT+GGG | 0.410718 | 1_3:+35221162 | Msa0116310:CDS |
| CTACAATCTTTGGTCGGGAA+GGG | 0.413706 | 1_3:+35227557 | Msa0116310:three_prime_UTR |
| GTGGTTGGTGGTGGGCCTAA+TGG | 0.419819 | 1_3:+35221402 | Msa0116310:CDS |
| ACAGTAAGCTAGTTTCTTGA+AGG | 0.421447 | 1_3:-35220801 | None:intergenic |
| AACAACTTCAGCCATGGAAT+GGG | 0.421682 | 1_3:+35227367 | Msa0116310:CDS |
| GCCTGTAATATATGAGTAAT+CGG | 0.422629 | 1_3:-35219505 | None:intergenic |
| GTTGGAATATTGAAAGATGT+TGG | 0.424223 | 1_3:+35223431 | Msa0116310:CDS |
| AGTACCTGCGGGTGAGATGC+AGG | 0.425788 | 1_3:-35218443 | None:intergenic |
| GCAGCTAGCATACCTTCAAA+AGG | 0.428825 | 1_3:-35221117 | None:intergenic |
| GATCCTTCCAGATATGATAA+GGG | 0.429047 | 1_3:+35220718 | Msa0116310:intron |
| ATTGCTGCATATTCCATGCC+TGG | 0.433035 | 1_3:+35227684 | Msa0116310:three_prime_UTR |
| TATCAGACTCACATAAGGTT+TGG | 0.437944 | 1_3:-35219595 | None:intergenic |
| AGATCCTTCCAGATATGATA+AGG | 0.439022 | 1_3:+35220717 | Msa0116310:intron |
| GCTTCTCCCAGAGAAGAGTT+TGG | 0.441988 | 1_3:+35219416 | Msa0116310:CDS |
| CACAAGGTTTCTGTTGATGT+TGG | 0.444626 | 1_3:+35218410 | Msa0116310:CDS |
| CATTACAGAAACAGGTTATG+AGG | 0.448108 | 1_3:+35226214 | Msa0116310:CDS |
| CATCTGTCATCATCTTTACT+GGG | 0.449826 | 1_3:-35219455 | None:intergenic |
| GTATTGTAGCTTCTAAAAGA+TGG | 0.451291 | 1_3:+35219333 | Msa0116310:intron |
| AACTTTAGTAAGTACCTCTC+TGG | 0.452530 | 1_3:-35224750 | None:intergenic |
| CCTAAAATGGCCACACCACC+AGG | 0.460454 | 1_3:-35219537 | None:intergenic |
| TGGTAGCTTCTCTTCTGCCC+AGG | 0.468113 | 1_3:+35221616 | Msa0116310:CDS |
| GGTACCAAGGCATTGGGATA+AGG | 0.470535 | 1_3:+35226174 | Msa0116310:intron |
| CCGAATGGTTGTGTATTTGT+CGG | 0.470570 | 1_3:-35222616 | None:intergenic |
| TGCAGCATTGAATACATTCA+AGG | 0.471710 | 1_3:+35220441 | Msa0116310:CDS |
| TATTGTAGCTTCTAAAAGAT+GGG | 0.472428 | 1_3:+35219334 | Msa0116310:intron |
| TCTTTCCTTTGTTGTAAAGC+CGG | 0.477981 | 1_3:-35227800 | None:intergenic |
| TAATGCAGGTACCAAGGCAT+TGG | 0.480015 | 1_3:+35226167 | Msa0116310:intron |
| CCCCAGTTCTTTAATGCACA+TGG | 0.480195 | 1_3:-35227436 | None:intergenic |
| TTCATCAGCTTGAGCTCTGA+AGG | 0.481437 | 1_3:-35220878 | None:intergenic |
| CGATGTGGGCTTTATTTGAA+AGG | 0.488371 | 1_3:+35218027 | Msa0116310:five_prime_UTR |
| TGTGTGGAACTTTGTAAGCC+TGG | 0.488945 | 1_3:+35222584 | Msa0116310:CDS |
| TTTGACTGTCCTCTGAAGCC+AGG | 0.489111 | 1_3:+35223667 | Msa0116310:CDS |
| ACAATCTTTGGTCGGGAAGG+GGG | 0.489677 | 1_3:+35227559 | Msa0116310:three_prime_UTR |
| ACCAGGCTACCTATAGAAGT+TGG | 0.492131 | 1_3:-35223479 | None:intergenic |
| GTCTAGGATGTGATTTGGCA+AGG | 0.493497 | 1_3:+35220400 | Msa0116310:intron |
| GACAAAAGAATAAGAGAGAA+AGG | 0.493916 | 1_3:+35227582 | Msa0116310:three_prime_UTR |
| AAACAACTTCAGCCATGGAA+TGG | 0.496327 | 1_3:+35227366 | Msa0116310:CDS |
| TCTACAATCTTTGGTCGGGA+AGG | 0.498593 | 1_3:+35227556 | Msa0116310:three_prime_UTR |
| AACATTGTGATACAATTTCG+AGG | 0.498748 | 1_3:-35220744 | None:intergenic |
| AATGAGAGGTGCGCAGCGAA+TGG | 0.501064 | 1_3:+35221161 | Msa0116310:CDS |
| TGGCCACACCACCAGGTTGT+TGG | 0.502948 | 1_3:-35219530 | None:intergenic |
| TAATGTATAACACTTCCATT+AGG | 0.503380 | 1_3:-35221417 | None:intergenic |
| GAGGGTTTAAGAGAGTAAGA+GGG | 0.504104 | 1_3:-35218122 | None:intergenic |
| TTCAGAGCTCAAGCTGATGA+AGG | 0.504671 | 1_3:+35220880 | Msa0116310:CDS |
| ATTTGGCAAGGGCATGTAGC+AGG | 0.507631 | 1_3:+35220412 | Msa0116310:CDS |
| GTATTCTACAATCTTTGGTC+GGG | 0.508904 | 1_3:+35227552 | Msa0116310:three_prime_UTR |
| TCAGCGATCTCACGCGTACC+TGG | 0.508919 | 1_3:+35221585 | Msa0116310:CDS |
| CAAAGTAAAGTAGACTGCTC+AGG | 0.509543 | 1_3:-35217991 | None:intergenic |
| ATCTATCTGTTTATACCCAT+CGG | 0.510938 | 1_3:+35220837 | Msa0116310:CDS |
| TACATCAGCATATACTGAAC+TGG | 0.512568 | 1_3:+35220775 | Msa0116310:CDS |
| CAGAAAGGACTCAAGGAGGT+TGG | 0.513664 | 1_3:+35223413 | Msa0116310:CDS |
| AGATTCAATCCCGTGGTTGG+TGG | 0.514269 | 1_3:+35221390 | Msa0116310:intron |
| ATCAACAGAAACCTTGTGAC+TGG | 0.514653 | 1_3:-35218405 | None:intergenic |
| TAAGAGAGAAAGGTGGGGCA+AGG | 0.514721 | 1_3:+35227592 | Msa0116310:three_prime_UTR |
| AATGCAGGTACCAAGGCATT+GGG | 0.515702 | 1_3:+35226168 | Msa0116310:intron |
| TGTATTCTACAATCTTTGGT+CGG | 0.519099 | 1_3:+35227551 | Msa0116310:three_prime_UTR |
| TGAAGGTATGCTAGCTGCAA+AGG | 0.521850 | 1_3:+35221122 | Msa0116310:CDS |
| GAAGCTACCACAAGGTGGCC+AGG | 0.525969 | 1_3:-35221603 | None:intergenic |
| TTTATACCCATCGGCTGCGA+TGG | 0.528638 | 1_3:+35220846 | Msa0116310:CDS |
| TTTCAAATAAAGCCCACATC+GGG | 0.531070 | 1_3:-35218025 | None:intergenic |
| CCAGGCTACCTATAGAAGTT+GGG | 0.533663 | 1_3:-35223478 | None:intergenic |
| AAAGATTGTAGAATACAAGT+TGG | 0.537196 | 1_3:-35227545 | None:intergenic |
| CTTACAACACCTGGCTTCAG+AGG | 0.541034 | 1_3:-35223676 | None:intergenic |
| AATCTGTAATAGAATTAGAG+AGG | 0.541889 | 1_3:-35218141 | None:intergenic |
| CAATCTTTGGTCGGGAAGGG+GGG | 0.542533 | 1_3:+35227560 | Msa0116310:three_prime_UTR |
| CAGCTAGCATACCTTCAAAA+GGG | 0.544862 | 1_3:-35221116 | None:intergenic |
| TGCACATGGACAGTATCAGC+TGG | 0.550753 | 1_3:-35227422 | None:intergenic |
| TCCATGTGCATTAAAGAACT+GGG | 0.551550 | 1_3:+35227435 | Msa0116310:three_prime_UTR |
| GATTTAAGACTACCCGATGT+GGG | 0.552663 | 1_3:+35218013 | Msa0116310:five_prime_UTR |
| AAAGATGGGATGTACACTCC+TGG | 0.554857 | 1_3:-35224717 | None:intergenic |
| TATTCCTCACTAGATATGCC+TGG | 0.555430 | 1_3:-35219366 | None:intergenic |
| TTGGAATGTTGCTCAAATGA+AGG | 0.556319 | 1_3:-35227526 | None:intergenic |
| GCTCGATTTGTTGTGTCTCG+TGG | 0.557838 | 1_3:-35218069 | None:intergenic |
| TGCGGGTGAGATGCAGGGGT+TGG | 0.558374 | 1_3:-35218437 | None:intergenic |
| TCTAGGATGTGATTTGGCAA+GGG | 0.563003 | 1_3:+35220401 | Msa0116310:intron |
| ATCTGTAATAGAATTAGAGA+GGG | 0.564241 | 1_3:-35218140 | None:intergenic |
| AGGCATTGGGATAAGGATTG+AGG | 0.564277 | 1_3:+35226181 | Msa0116310:CDS |
| TACACCAATAAAACCAGGCA+TGG | 0.566768 | 1_3:-35227697 | None:intergenic |
| CCGACAAATACACAACCATT+CGG | 0.567790 | 1_3:+35222616 | Msa0116310:CDS |
| TTACACCGGCTTTACAACAA+AGG | 0.568097 | 1_3:+35227795 | Msa0116310:three_prime_UTR |
| AGTTGGGTTCAGCTTATGGT+AGG | 0.568189 | 1_3:-35223462 | None:intergenic |
| ATGGCTGAAGTTGTTTAGCA+AGG | 0.569030 | 1_3:-35227359 | None:intergenic |
| GGGAAAGCACTTACAACACC+TGG | 0.570813 | 1_3:-35223685 | None:intergenic |
| AACCCCTGCATCTCACCCGC+AGG | 0.573533 | 1_3:+35218439 | Msa0116310:CDS |
| AAAGAATAAGAGAGAAAGGT+GGG | 0.574190 | 1_3:+35227586 | Msa0116310:three_prime_UTR |
| TGATTTAAGACTACCCGATG+TGG | 0.574907 | 1_3:+35218012 | Msa0116310:five_prime_UTR |
| ATTAGGCCCACCACCAACCA+CGG | 0.575070 | 1_3:-35221400 | None:intergenic |
| CATTGCATTGTCAAAACTGT+TGG | 0.576034 | 1_3:+35227473 | Msa0116310:three_prime_UTR |
| CAATCCTTATCCCAATGCCT+TGG | 0.576534 | 1_3:-35226178 | None:intergenic |
| TTGCTAAACAACTTCAGCCA+TGG | 0.577584 | 1_3:+35227361 | Msa0116310:CDS |
| TCAATCCCGTGGTTGGTGGT+GGG | 0.577700 | 1_3:+35221394 | Msa0116310:CDS |
| TGAGAGGTGCGCAGCGAATG+GGG | 0.579429 | 1_3:+35221163 | Msa0116310:CDS |
| GTACCTGCGGGTGAGATGCA+GGG | 0.580749 | 1_3:-35218442 | None:intergenic |
| TACCTGCGGGTGAGATGCAG+GGG | 0.581809 | 1_3:-35218441 | None:intergenic |
| GACATTGGATGTGAGTTACA+TGG | 0.582230 | 1_3:+35221557 | Msa0116310:CDS |
| TGATAGCCAAACTCTTCTCT+GGG | 0.583126 | 1_3:-35219422 | None:intergenic |
| TCTCATTGGATACGCCTCGT+TGG | 0.585869 | 1_3:-35220464 | None:intergenic |
| TGCTCAGGCTATAAATTACA+AGG | 0.587129 | 1_3:-35217976 | None:intergenic |
| AAAGATGGGGAGATCACACC+AGG | 0.587344 | 1_3:+35219348 | Msa0116310:CDS |
| ATCAGATTCAATCCCGTGGT+TGG | 0.587531 | 1_3:+35221387 | Msa0116310:intron |
| TTAGGCCCACCACCAACCAC+GGG | 0.589559 | 1_3:-35221399 | None:intergenic |
| AGCTTACTGTAACAACGTAA+AGG | 0.590674 | 1_3:+35220814 | Msa0116310:CDS |
| ACAACTTCAGCCATGGAATG+GGG | 0.593125 | 1_3:+35227368 | Msa0116310:CDS |
| CTGCCAACAACCTGGTGGTG+TGG | 0.593769 | 1_3:+35219527 | Msa0116310:CDS |
| TCGTTCTTATTCCAGTCACA+AGG | 0.594752 | 1_3:+35218394 | Msa0116310:CDS |
| ATTACAGGCTGCCAACAACC+TGG | 0.596169 | 1_3:+35219519 | Msa0116310:CDS |
| CAGGTTGAAATGCTGCAGAA+AGG | 0.597743 | 1_3:+35223398 | Msa0116310:intron |
| ACGCGTACCTGGCCACCTTG+TGG | 0.599158 | 1_3:+35221596 | Msa0116310:CDS |
| CAGGTAATAACTATTGAACC+AGG | 0.600635 | 1_3:+35224699 | Msa0116310:intron |
| TCCAGGTCACTATCTAGGAA+TGG | 0.601316 | 1_3:+35223618 | Msa0116310:intron |
| AGAAACTAACAAGCATTGTG+TGG | 0.607256 | 1_3:+35222568 | Msa0116310:CDS |
| CTTTCAAATAAAGCCCACAT+CGG | 0.616172 | 1_3:-35218026 | None:intergenic |
| ATCCTTCCAGATATGATAAG+GGG | 0.625213 | 1_3:+35220719 | Msa0116310:CDS |
| AATGCTGCAGAAAGGACTCA+AGG | 0.627439 | 1_3:+35223406 | Msa0116310:CDS |
| TTATTCTAGGAACGATCAGA+AGG | 0.629437 | 1_3:+35221437 | Msa0116310:CDS |
| CTGTATCAGATTCAATCCCG+TGG | 0.633552 | 1_3:+35221383 | Msa0116310:intron |
| CAACTTCAGCCATGGAATGG+GGG | 0.635710 | 1_3:+35227369 | Msa0116310:CDS |
| ATCAGCATATACTGAACTGG+AGG | 0.641525 | 1_3:+35220778 | Msa0116310:CDS |
| ATTGTAGCTTCTAAAAGATG+GGG | 0.641791 | 1_3:+35219335 | Msa0116310:intron |
| ATTTGTCGGATACTAGCACC+AGG | 0.642966 | 1_3:-35222602 | None:intergenic |
| AACCCCTTATCATATCTGGA+AGG | 0.645748 | 1_3:-35220721 | None:intergenic |
| ACTAAACTAAACTAAACTAG+AGG | 0.650591 | 1_3:-35218169 | None:intergenic |
| GATCTCTAATGCAGGTACCA+AGG | 0.651356 | 1_3:+35226161 | Msa0116310:intron |
| GAATGTTGCTCAAATGAAGG+AGG | 0.660508 | 1_3:-35227523 | None:intergenic |
| AAAAGAATAAGAGAGAAAGG+TGG | 0.665935 | 1_3:+35227585 | Msa0116310:three_prime_UTR |
| CACACCAGGCATATCTAGTG+AGG | 0.673963 | 1_3:+35219362 | Msa0116310:CDS |
| TAATTTACACCAATAAAACC+AGG | 0.681752 | 1_3:-35227702 | None:intergenic |
| ATCTGTCATCATCTTTACTG+GGG | 0.686632 | 1_3:-35219454 | None:intergenic |
| ACATTGGATGTGAGTTACAT+GGG | 0.693361 | 1_3:+35221558 | Msa0116310:CDS |
| GAATACGAATGCAAAATGAG+AGG | 0.696219 | 1_3:+35221147 | Msa0116310:CDS |
| GCAGAAGAGAAGCTACCACA+AGG | 0.709712 | 1_3:-35221611 | None:intergenic |
| AAGAATAAGAGAGAAAGGTG+GGG | 0.714879 | 1_3:+35227587 | Msa0116310:three_prime_UTR |
| CCATGTGCATTAAAGAACTG+GGG | 0.719846 | 1_3:+35227436 | Msa0116310:three_prime_UTR |
| GAAGAGAAGCTACCACAAGG+TGG | 0.733869 | 1_3:-35221608 | None:intergenic |
| TCCAATGAGAAAGTTGAACG+AGG | 0.743293 | 1_3:+35220477 | Msa0116310:CDS |
| ACAGGCTGCCAACAACCTGG+TGG | 0.744058 | 1_3:+35219522 | Msa0116310:CDS |
| GCTGCAGAAAGGACTCAAGG+AGG | 0.745589 | 1_3:+35223409 | Msa0116310:CDS |
| GAATACATTCAAGGCCAACG+AGG | 0.787952 | 1_3:+35220450 | Msa0116310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAATAATAAAGTAATT+AGG | - | chr1_3:35218303-35218322 | None:intergenic | 10.0% |
| !!! | ATTTTAACAAATAAGTATTT+CGG | - | chr1_3:35219281-35219300 | None:intergenic | 10.0% |
| !!! | ATAACTTTTTTTTTTAAACA+TGG | - | chr1_3:35219310-35219329 | None:intergenic | 10.0% |
| !!! | ATATATGAAATAACTAATTT+TGG | + | chr1_3:35220348-35220367 | Msa0116310:intron | 10.0% |
| !!! | AAATATTGAATTTTAATGTA+AGG | + | chr1_3:35223183-35223202 | Msa0116310:intron | 10.0% |
| !! | AATAACAAACTATATTAATT+TGG | - | chr1_3:35224444-35224463 | None:intergenic | 10.0% |
| !! | CTTTATAAATATTAAATAGA+TGG | - | chr1_3:35226416-35226435 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTTCAAATGAA+AGG | - | chr1_3:35226686-35226705 | None:intergenic | 10.0% |
| !! | GAAAAATAAAAAATATTCAT+TGG | + | chr1_3:35226693-35226712 | Msa0116310:intron | 10.0% |
| !! | TTATTTGTTTCAATTAATCA+AGG | + | chr1_3:35218319-35218338 | Msa0116310:intron | 15.0% |
| !!! | TAATAATTTAATTTTGAAGG+TGG | - | chr1_3:35218481-35218500 | None:intergenic | 15.0% |
| !! | CATCTTAAAATATAATTTGA+TGG | - | chr1_3:35219011-35219030 | None:intergenic | 15.0% |
| !! | GATTCAAAACAAAAAATTAA+TGG | - | chr1_3:35219978-35219997 | None:intergenic | 15.0% |
| !! | CATTAATATAGAAAACTAAA+TGG | + | chr1_3:35221301-35221320 | Msa0116310:intron | 15.0% |
| !! | AATGGAATTAGATTAAAAAT+GGG | - | chr1_3:35222024-35222043 | None:intergenic | 15.0% |
| !! | AAATGGAATTAGATTAAAAA+TGG | - | chr1_3:35222025-35222044 | None:intergenic | 15.0% |
| !! | CATACTACTAAAATAAAAAA+TGG | - | chr1_3:35222042-35222061 | None:intergenic | 15.0% |
| !!! | ATCTTTTATTTTTTTACTCA+AGG | - | chr1_3:35222096-35222115 | None:intergenic | 15.0% |
| !! | TCAAATATTTATAAGACATT+GGG | - | chr1_3:35222396-35222415 | None:intergenic | 15.0% |
| !! | TTCAAATATTTATAAGACAT+TGG | - | chr1_3:35222397-35222416 | None:intergenic | 15.0% |
| !!! | TCTTATAAATATTTGAAACT+TGG | + | chr1_3:35222400-35222419 | Msa0116310:intron | 15.0% |
| !! | TTGAAAAAATGATAAGAAAA+AGG | - | chr1_3:35222647-35222666 | None:intergenic | 15.0% |
| !!! | TATGAATATCATCTAAAATA+TGG | + | chr1_3:35222950-35222969 | Msa0116310:intron | 15.0% |
| !!! | TAATTTTGCAAAACTAATTT+TGG | - | chr1_3:35223071-35223090 | None:intergenic | 15.0% |
| !! | ATCTGTAACAAAAAAAAATA+TGG | - | chr1_3:35223534-35223553 | None:intergenic | 15.0% |
| !!! | TGACATTTGAAATAAAAATA+TGG | + | chr1_3:35223569-35223588 | Msa0116310:intron | 15.0% |
| !!! | TTACCATATAATGATTTTAT+GGG | - | chr1_3:35223774-35223793 | None:intergenic | 15.0% |
| !!! | ATTACCATATAATGATTTTA+TGG | - | chr1_3:35223775-35223794 | None:intergenic | 15.0% |
| !! | ATAAAATCATTATATGGTAA+TGG | + | chr1_3:35223774-35223793 | Msa0116310:intron | 15.0% |
| !!! | CTTTATTTTCAATTTTTGTA+TGG | + | chr1_3:35224032-35224051 | Msa0116310:intron | 15.0% |
| !! | ATACAAAAATCATACAAATA+GGG | + | chr1_3:35224114-35224133 | Msa0116310:intron | 15.0% |
| !!! | TCTATTTTATACATAAAATG+TGG | - | chr1_3:35224184-35224203 | None:intergenic | 15.0% |
| !!! | GAAACTATATTATATTTTCA+TGG | - | chr1_3:35224418-35224437 | None:intergenic | 15.0% |
| !! | TGAAAATATAATATAGTTTC+TGG | + | chr1_3:35224418-35224437 | Msa0116310:intron | 15.0% |
| !!! | TATAGTTTGTTATTTTTTAG+CGG | + | chr1_3:35224450-35224469 | Msa0116310:intron | 15.0% |
| !!! | CAACATAATTTTAAAATGAA+AGG | - | chr1_3:35226354-35226373 | None:intergenic | 15.0% |
| !!! | CATATAAAATTTTAAAAGAG+AGG | + | chr1_3:35226468-35226487 | Msa0116310:intron | 15.0% |
| !! | TAATATTAGTTATTAACTTC+AGG | - | chr1_3:35227286-35227305 | None:intergenic | 15.0% |
| !!! | TTATTGATGATCTTATAAAA+TGG | + | chr1_3:35227722-35227741 | Msa0116310:three_prime_UTR | 15.0% |
| !! | AATTTGAAGAAATGAAGATA+TGG | - | chr1_3:35218278-35218297 | None:intergenic | 20.0% |
| !! | AAAACTAATTTACAACGAAA+TGG | - | chr1_3:35218519-35218538 | None:intergenic | 20.0% |
| !!! | TTTCTACTTTTCTATTTCAT+AGG | + | chr1_3:35218552-35218571 | Msa0116310:intron | 20.0% |
| !!! | TTTTAGGTTTTACTATATAG+TGG | - | chr1_3:35218856-35218875 | None:intergenic | 20.0% |
| !! | ACTATATAGTAAAACCTAAA+AGG | + | chr1_3:35218855-35218874 | Msa0116310:intron | 20.0% |
| !! | CTATATAGTAAAACCTAAAA+GGG | + | chr1_3:35218856-35218875 | Msa0116310:intron | 20.0% |
| !! | AACTAACTTATAAATCCAAA+AGG | + | chr1_3:35218889-35218908 | Msa0116310:intron | 20.0% |
| !!! | TAAGATGTAGATATTTGTTA+TGG | + | chr1_3:35219024-35219043 | Msa0116310:intron | 20.0% |
| !!! | AGATATTTGTTATGGTATTT+AGG | + | chr1_3:35219032-35219051 | Msa0116310:intron | 20.0% |
| !!! | AATATCACCTTAAATGTTTT+TGG | + | chr1_3:35219823-35219842 | Msa0116310:intron | 20.0% |
| !!! | TTTTTGGTCCATTAATTTTT+GGG | + | chr1_3:35219839-35219858 | Msa0116310:intron | 20.0% |
| !!! | TCAGTTTTTTTCATCAAAAA+AGG | - | chr1_3:35220130-35220149 | None:intergenic | 20.0% |
| !! | TCCAAAAATCATCTTATATT+TGG | + | chr1_3:35220151-35220170 | Msa0116310:intron | 20.0% |
| !! | CCAAAAATCATCTTATATTT+GGG | + | chr1_3:35220152-35220171 | Msa0116310:intron | 20.0% |
| !! | CAAAAATCATCTTATATTTG+GGG | + | chr1_3:35220153-35220172 | Msa0116310:intron | 20.0% |
| !! | ATAACAATTGAAATACTACA+TGG | - | chr1_3:35220254-35220273 | None:intergenic | 20.0% |
| !! | TTGAAATCTTAAATTTGTCT+AGG | + | chr1_3:35220384-35220403 | Msa0116310:intron | 20.0% |
| !! | TTTCTTATCTTTATCATGTT+TGG | + | chr1_3:35221504-35221523 | Msa0116310:intron | 20.0% |
| !!! | AAACATTTTCTCAAAGTAAA+CGG | - | chr1_3:35221700-35221719 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTACTCAAGGTA+TGG | - | chr1_3:35222091-35222110 | None:intergenic | 20.0% |
| !! | ATGTCCAAAAATATTCATTT+GGG | - | chr1_3:35222199-35222218 | None:intergenic | 20.0% |
| !! | TATGTCCAAAAATATTCATT+TGG | - | chr1_3:35222200-35222219 | None:intergenic | 20.0% |
| !! | CAATTTATAAAGATGCAATA+AGG | + | chr1_3:35222664-35222683 | Msa0116310:intron | 20.0% |
| !!! | ATGACTTTTATTTAAGGATA+AGG | - | chr1_3:35222697-35222716 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTAATGTAAGGA+AGG | + | chr1_3:35223187-35223206 | Msa0116310:intron | 20.0% |
| !!! | TATCAATTAATTTTCAGATG+TGG | + | chr1_3:35223734-35223753 | Msa0116310:intron | 20.0% |
| !!! | ATCAATTAATTTTCAGATGT+GGG | + | chr1_3:35223735-35223754 | Msa0116310:intron | 20.0% |
| !!! | ATAAAGAAATATAATTTGCC+AGG | - | chr1_3:35224018-35224037 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTTGTATGGTAA+AGG | + | chr1_3:35224038-35224057 | Msa0116310:intron | 20.0% |
| !!! | TTCAATTTTTGTATGGTAAA+GGG | + | chr1_3:35224039-35224058 | Msa0116310:intron | 20.0% |
| !! | CATACAAAAATCATACAAAT+AGG | + | chr1_3:35224113-35224132 | Msa0116310:intron | 20.0% |
| !! | TTAAATGCAATAATAATTGC+CGG | - | chr1_3:35224357-35224376 | None:intergenic | 20.0% |
| !!! | ATAGTTTGTTATTTTTTAGC+GGG | + | chr1_3:35224451-35224470 | Msa0116310:intron | 20.0% |
| !! | CTTCAAAAAAAAAAAGAACT+TGG | - | chr1_3:35224531-35224550 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCAGTTATCTAAT+TGG | + | chr1_3:35224574-35224593 | Msa0116310:intron | 20.0% |
| !!! | TATCTAATTGGATTTTTTAC+CGG | + | chr1_3:35224586-35224605 | Msa0116310:intron | 20.0% |
| !! | AATTGATCATTACAAATTAC+TGG | + | chr1_3:35224795-35224814 | Msa0116310:intron | 20.0% |
| !!! | TTTTACAACATTCAAATTCA+TGG | + | chr1_3:35224830-35224849 | Msa0116310:intron | 20.0% |
| !! | TTTACAACATTCAAATTCAT+GGG | + | chr1_3:35224831-35224850 | Msa0116310:intron | 20.0% |
| !!! | TCTTGTTTGATTCAATAAAA+TGG | + | chr1_3:35225027-35225046 | Msa0116310:intron | 20.0% |
| !! | CTTGTTTGATTCAATAAAAT+GGG | + | chr1_3:35225028-35225047 | Msa0116310:intron | 20.0% |
| !! | TTGTTTGATTCAATAAAATG+GGG | + | chr1_3:35225029-35225048 | Msa0116310:intron | 20.0% |
| !!! | GTTTGTTTAATAGGAATTTT+AGG | + | chr1_3:35225075-35225094 | Msa0116310:intron | 20.0% |
| !! | GCATTAAGAAAATTAGATAA+TGG | + | chr1_3:35225271-35225290 | Msa0116310:intron | 20.0% |
| !! | CTTAACTAAACTTCATTAAA+AGG | - | chr1_3:35225337-35225356 | None:intergenic | 20.0% |
| !!! | TAATTTAATTTACTACCTTG+TGG | - | chr1_3:35225368-35225387 | None:intergenic | 20.0% |
| !! | ACAAGGTAGTAAATTAAATT+AGG | + | chr1_3:35225367-35225386 | Msa0116310:intron | 20.0% |
| !! | CAAGGTAGTAAATTAAATTA+GGG | + | chr1_3:35225368-35225387 | Msa0116310:intron | 20.0% |
| !! | AAGGTAGTAAATTAAATTAG+GGG | + | chr1_3:35225369-35225388 | Msa0116310:intron | 20.0% |
| !!! | CCATTTTTAGAAAATATACA+GGG | - | chr1_3:35225524-35225543 | None:intergenic | 20.0% |
| !!! | ACCATTTTTAGAAAATATAC+AGG | - | chr1_3:35225525-35225544 | None:intergenic | 20.0% |
| !!! | TGAATGTTTTTTAAGTTGAT+TGG | + | chr1_3:35225915-35225934 | Msa0116310:intron | 20.0% |
| !! | AAACTTGAAATAATGAATGA+AGG | + | chr1_3:35226320-35226339 | Msa0116310:intron | 20.0% |
| !! | AAAAAGGAATGTTTATAAAG+AGG | - | chr1_3:35226382-35226401 | None:intergenic | 20.0% |
| !!! | TTTTCAAGTCATCAATTAAT+TGG | + | chr1_3:35226726-35226745 | Msa0116310:intron | 20.0% |
| !!! | TTTTCTTAACTAATGTCTTA+AGG | + | chr1_3:35226772-35226791 | Msa0116310:intron | 20.0% |
| !! | TTTCTTAACTAATGTCTTAA+GGG | + | chr1_3:35226773-35226792 | Msa0116310:intron | 20.0% |
| !! | TTTCTTAAGTTATCATAGTT+GGG | - | chr1_3:35227160-35227179 | None:intergenic | 20.0% |
| !!! | TTTTCTTAAGTTATCATAGT+TGG | - | chr1_3:35227161-35227180 | None:intergenic | 20.0% |
| ! | ATCTGTAATAGAATTAGAGA+GGG | - | chr1_3:35218143-35218162 | None:intergenic | 25.0% |
| ! | AATCTGTAATAGAATTAGAG+AGG | - | chr1_3:35218144-35218163 | None:intergenic | 25.0% |
| ! | ACTAAACTAAACTAAACTAG+AGG | - | chr1_3:35218172-35218191 | None:intergenic | 25.0% |
| ! | TTTGAATAATTAGCATTTGC+AGG | + | chr1_3:35218361-35218380 | Msa0116310:intron | 25.0% |
| ! | TACACTGTATAAATGTGTTT+GGG | + | chr1_3:35218927-35218946 | Msa0116310:intron | 25.0% |
| !!! | TTTTAGAAGCTAACATTAGT+TGG | + | chr1_3:35219164-35219183 | Msa0116310:intron | 25.0% |
| !! | TATTGTAGCTTCTAAAAGAT+GGG | + | chr1_3:35219334-35219353 | Msa0116310:intron | 25.0% |
| !! | TAATGGACCAAAAACATTTA+AGG | - | chr1_3:35219833-35219852 | None:intergenic | 25.0% |
| !!! | GTTTTTGGTCCATTAATTTT+TGG | + | chr1_3:35219838-35219857 | Msa0116310:intron | 25.0% |
| ! | AGAAACGATTGATGAAATTT+AGG | + | chr1_3:35219904-35219923 | Msa0116310:intron | 25.0% |
| ! | TAAGGACTGACAAAAATTAA+GGG | - | chr1_3:35220003-35220022 | None:intergenic | 25.0% |
| ! | TTAAGGACTGACAAAAATTA+AGG | - | chr1_3:35220004-35220023 | None:intergenic | 25.0% |
| !!! | CATGATTTTTGGATCTTTTA+AGG | - | chr1_3:35220021-35220040 | None:intergenic | 25.0% |
| !! | CCCAAATATAAGATGATTTT+TGG | - | chr1_3:35220155-35220174 | None:intergenic | 25.0% |
| ! | TGAAAGTTCAAGTATTTATG+TGG | - | chr1_3:35220197-35220216 | None:intergenic | 25.0% |
| !! | ACTTAAATGCACATTTTAGA+CGG | - | chr1_3:35220632-35220651 | None:intergenic | 25.0% |
| !! | TGTTATATGCAGATTTGTTT+AGG | + | chr1_3:35220998-35221017 | Msa0116310:intron | 25.0% |
| !!! | TTGATGATTTGAACATTTTC+TGG | + | chr1_3:35221048-35221067 | Msa0116310:intron | 25.0% |
| !!! | AACATTTTCTGGTTTTGAAT+AGG | + | chr1_3:35221059-35221078 | Msa0116310:intron | 25.0% |
| ! | TAATGTATAACACTTCCATT+AGG | - | chr1_3:35221420-35221439 | None:intergenic | 25.0% |
| !! | GAAGTGTTATACATTATTCT+AGG | + | chr1_3:35221424-35221443 | Msa0116310:CDS | 25.0% |
| !! | AACATTTTCTCAAAGTAAAC+GGG | - | chr1_3:35221699-35221718 | None:intergenic | 25.0% |
| !!! | ATTGCATCGATTTTCATTTA+TGG | + | chr1_3:35221939-35221958 | Msa0116310:intron | 25.0% |
| !! | ATAGCCCAAATGAATATTTT+TGG | + | chr1_3:35222192-35222211 | Msa0116310:intron | 25.0% |
| !! | TCACGATTTTTCTATATTAC+AGG | + | chr1_3:35222523-35222542 | Msa0116310:intron | 25.0% |
| ! | GTTATTAGAATAACTCATGA+AGG | - | chr1_3:35222723-35222742 | None:intergenic | 25.0% |
| !!! | GATGAATAAATTTTGAGTCA+AGG | + | chr1_3:35222840-35222859 | Msa0116310:intron | 25.0% |
| ! | TTAGGGGTTAAAATTAAGTT+TGG | - | chr1_3:35222879-35222898 | None:intergenic | 25.0% |
| ! | GTTCCCATAAAATCATTATA+TGG | + | chr1_3:35223768-35223787 | Msa0116310:intron | 25.0% |
| !! | TTTTCAGTATTTCCAAACAT+TGG | + | chr1_3:35223868-35223887 | Msa0116310:intron | 25.0% |
| !!! | CAGAATATTTTTAAGCTGAT+TGG | - | chr1_3:35224079-35224098 | None:intergenic | 25.0% |
| !!! | AATTTGCTTCTCTAAAGTAA+GGG | + | chr1_3:35224203-35224222 | Msa0116310:intron | 25.0% |
| ! | TTAAGAGGATAAATTGTGTA+AGG | + | chr1_3:35224232-35224251 | Msa0116310:intron | 25.0% |
| ! | ACTTTCTTAATGTTAATGTC+CGG | + | chr1_3:35224335-35224354 | Msa0116310:intron | 25.0% |
| !!! | TAGTTTGTTATTTTTTAGCG+GGG | + | chr1_3:35224452-35224471 | Msa0116310:intron | 25.0% |
| ! | CAAAAAAAAAAAGAACTTGG+TGG | - | chr1_3:35224528-35224547 | None:intergenic | 25.0% |
| ! | ACTGAAAGAAAAATAGAACT+TGG | - | chr1_3:35224566-35224585 | None:intergenic | 25.0% |
| ! | ATATGCTTTACCAATTCATA+TGG | + | chr1_3:35224623-35224642 | Msa0116310:intron | 25.0% |
| ! | TACATTATGTCCATATGAAT+TGG | - | chr1_3:35224636-35224655 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTAATTTGTGAGC+AGG | + | chr1_3:35224680-35224699 | Msa0116310:intron | 25.0% |
| ! | CTGGACAATTAAAAAAAGAT+GGG | - | chr1_3:35224734-35224753 | None:intergenic | 25.0% |
| ! | TCTGGACAATTAAAAAAAGA+TGG | - | chr1_3:35224735-35224754 | None:intergenic | 25.0% |
| ! | TTGAATGTTGTAAAAATAGC+TGG | - | chr1_3:35224825-35224844 | None:intergenic | 25.0% |
| !! | ACGATTAGAGTTTGTTTAAT+AGG | + | chr1_3:35225066-35225085 | Msa0116310:intron | 25.0% |
| !! | TGTTTAATAGGAATTTTAGG+AGG | + | chr1_3:35225078-35225097 | Msa0116310:intron | 25.0% |
| ! | AGTTCTTATTCTATCTTATG+AGG | + | chr1_3:35225120-35225139 | Msa0116310:intron | 25.0% |
| ! | GTTCTTATTCTATCTTATGA+GGG | + | chr1_3:35225121-35225140 | Msa0116310:intron | 25.0% |
| ! | TTAATGCATGAATTATCCAA+AGG | - | chr1_3:35225207-35225226 | None:intergenic | 25.0% |
| ! | TTAATGCATGAATTATCCAA+AGG | - | chr1_3:35225207-35225226 | None:intergenic | 25.0% |
| ! | ACTTCATTAAAAGGCAATTT+CGG | - | chr1_3:35225328-35225347 | None:intergenic | 25.0% |
| ! | TGCATCTAATAATTATGAGA+AGG | + | chr1_3:35225415-35225434 | Msa0116310:intron | 25.0% |
| ! | GCATCTAATAATTATGAGAA+GGG | + | chr1_3:35225416-35225435 | Msa0116310:intron | 25.0% |
| ! | CATCTAATAATTATGAGAAG+GGG | + | chr1_3:35225417-35225436 | Msa0116310:intron | 25.0% |
| !!! | CCCTGTATATTTTCTAAAAA+TGG | + | chr1_3:35225521-35225540 | Msa0116310:intron | 25.0% |
| ! | TATTAAACTCATGTTTGCTT+TGG | + | chr1_3:35225663-35225682 | Msa0116310:intron | 25.0% |
| ! | CTATTCCATTATACTTTACA+TGG | - | chr1_3:35225693-35225712 | None:intergenic | 25.0% |
| ! | AAATAATGAATGAAGGTAGT+AGG | + | chr1_3:35226327-35226346 | Msa0116310:intron | 25.0% |
| !! | TAAACATTCCTTTTTCCTAT+AGG | + | chr1_3:35226387-35226406 | Msa0116310:intron | 25.0% |
| !! | AAACATTCCTTTTTCCTATA+GGG | + | chr1_3:35226388-35226407 | Msa0116310:intron | 25.0% |
| !!! | TAGCTTTAAACATACTAGTA+AGG | + | chr1_3:35226655-35226674 | Msa0116310:intron | 25.0% |
| ! | TCTGCTAATGATTTGATATT+AGG | - | chr1_3:35226823-35226842 | None:intergenic | 25.0% |
| ! | AAATTTGGGTGAAATTTCTT+AGG | + | chr1_3:35227079-35227098 | Msa0116310:intron | 25.0% |
| ! | CTTAAGAAAAGAAAATGAAG+TGG | + | chr1_3:35227171-35227190 | Msa0116310:intron | 25.0% |
| ! | TAACTAATATTACGCAATAC+AGG | + | chr1_3:35227294-35227313 | Msa0116310:intron | 25.0% |
| ! | AAAGATTGTAGAATACAAGT+TGG | - | chr1_3:35227548-35227567 | None:intergenic | 25.0% |
| ! | AACTTGTATTCTACAATCTT+TGG | + | chr1_3:35227547-35227566 | Msa0116310:three_prime_UTR | 25.0% |
| ! | TAATTTACACCAATAAAACC+AGG | - | chr1_3:35227705-35227724 | None:intergenic | 25.0% |
| ! | ACTGCTGTGAAAAATTTATA+TGG | - | chr1_3:35227754-35227773 | None:intergenic | 25.0% |
| !! | TATAAATTTTTCACAGCAGT+TGG | + | chr1_3:35227754-35227773 | Msa0116310:three_prime_UTR | 25.0% |
| !! | TGTAATGTAATCTTTTACAC+CGG | + | chr1_3:35227781-35227800 | Msa0116310:three_prime_UTR | 25.0% |
| ! | AGATTGCAAAAGTGCAAAAA+CGG | + | chr1_3:35218093-35218112 | Msa0116310:five_prime_UTR | 30.0% |
| ! | CTGTTTGTGTGAAAATGTTT+TGG | - | chr1_3:35218245-35218264 | None:intergenic | 30.0% |
| ! | CAAAACATTTTCACACAAAC+AGG | + | chr1_3:35218243-35218262 | Msa0116310:CDS | 30.0% |
| GTACACTGTATAAATGTGTT+TGG | + | chr1_3:35218926-35218945 | Msa0116310:intron | 30.0% | |
| !! | GTGTGTGTGTTTTAAACTAT+CGG | + | chr1_3:35219100-35219119 | Msa0116310:intron | 30.0% |
| GTAAAATACTACCATTGTCT+AGG | + | chr1_3:35219186-35219205 | Msa0116310:intron | 30.0% | |
| ! | GTATTGTAGCTTCTAAAAGA+TGG | + | chr1_3:35219333-35219352 | Msa0116310:intron | 30.0% |
| ! | ATTGTAGCTTCTAAAAGATG+GGG | + | chr1_3:35219335-35219354 | Msa0116310:intron | 30.0% |
| ! | CCAACAATTTTTCTCTTCTT+AGG | - | chr1_3:35219395-35219414 | None:intergenic | 30.0% |
| CCTAAGAAGAGAAAAATTGT+TGG | + | chr1_3:35219392-35219411 | Msa0116310:CDS | 30.0% | |
| GCCTGTAATATATGAGTAAT+CGG | - | chr1_3:35219508-35219527 | None:intergenic | 30.0% | |
| ! | AACATCTTTATTGTTTCTCC+CGG | + | chr1_3:35219645-35219664 | Msa0116310:intron | 30.0% |
| ! | AAGCATTGCAAAATACATAC+CGG | - | chr1_3:35219667-35219686 | None:intergenic | 30.0% |
| TAGCATGACCCAAAAATTAA+TGG | - | chr1_3:35219850-35219869 | None:intergenic | 30.0% | |
| ! | CATTATACGCACATGATTTT+TGG | - | chr1_3:35220032-35220051 | None:intergenic | 30.0% |
| TGTGAACTAGTAGTATATAG+AGG | + | chr1_3:35220095-35220114 | Msa0116310:intron | 30.0% | |
| TTCATCAAAAAAGGAATTCC+TGG | - | chr1_3:35220121-35220140 | None:intergenic | 30.0% | |
| TATTATAACCCTAGAAGACA+TGG | - | chr1_3:35220331-35220350 | None:intergenic | 30.0% | |
| ! | AATTTGTCTAGGATGTGATT+TGG | + | chr1_3:35220395-35220414 | Msa0116310:intron | 30.0% |
| TGAAAATAGTTCAAGTGTAG+AGG | - | chr1_3:35220564-35220583 | None:intergenic | 30.0% | |
| AACATTGTGATACAATTTCG+AGG | - | chr1_3:35220747-35220766 | None:intergenic | 30.0% | |
| ATCTATCTGTTTATACCCAT+CGG | + | chr1_3:35220837-35220856 | Msa0116310:CDS | 30.0% | |
| CAAGTTTCAACTCTATTTGA+TGG | + | chr1_3:35220933-35220952 | Msa0116310:intron | 30.0% | |
| ! | ATTTGATGGCTAACTATTTG+AGG | + | chr1_3:35220947-35220966 | Msa0116310:intron | 30.0% |
| ! | TATATGCAGATTTGTTTAGG+AGG | + | chr1_3:35221001-35221020 | Msa0116310:intron | 30.0% |
| ATCATCAAGTTCTTACCATT+TGG | - | chr1_3:35221036-35221055 | None:intergenic | 30.0% | |
| ! | TCAAAAACATACCCTTTTGA+AGG | + | chr1_3:35221105-35221124 | Msa0116310:CDS | 30.0% |
| !! | TCCTTTTAGAAATCCTATCT+AGG | + | chr1_3:35221654-35221673 | Msa0116310:intron | 30.0% |
| ACCTAGATAGGATTTCTAAA+AGG | - | chr1_3:35221658-35221677 | None:intergenic | 30.0% | |
| AGAAATCCTATCTAGGTATT+TGG | + | chr1_3:35221661-35221680 | Msa0116310:intron | 30.0% | |
| GAAATCCTATCTAGGTATTT+GGG | + | chr1_3:35221662-35221681 | Msa0116310:intron | 30.0% | |
| TAGGTATTTGGGAAATCTTA+CGG | + | chr1_3:35221673-35221692 | Msa0116310:intron | 30.0% | |
| CATCAGTAAATAGTCTATCA+AGG | - | chr1_3:35221843-35221862 | None:intergenic | 30.0% | |
| ! | CATATGTATTGCACTTCTTT+TGG | + | chr1_3:35221977-35221996 | Msa0116310:intron | 30.0% |
| ! | AGATTCTTTTCGCATGAATA+TGG | - | chr1_3:35222434-35222453 | None:intergenic | 30.0% |
| !! | AGGACGATGACTTTTATTTA+AGG | - | chr1_3:35222703-35222722 | None:intergenic | 30.0% |
| !! | TTTGAAGTTGATGATTGACA+TGG | + | chr1_3:35222751-35222770 | Msa0116310:intron | 30.0% |
| !! | TTTTGAGTCAAGGTTAACAA+CGG | + | chr1_3:35222850-35222869 | Msa0116310:intron | 30.0% |
| !! | CACAAAAGCATTATGTTTAG+GGG | - | chr1_3:35222895-35222914 | None:intergenic | 30.0% |
| !! | CCACAAAAGCATTATGTTTA+GGG | - | chr1_3:35222896-35222915 | None:intergenic | 30.0% |
| !! | ACCACAAAAGCATTATGTTT+AGG | - | chr1_3:35222897-35222916 | None:intergenic | 30.0% |
| GTTGGAATATTGAAAGATGT+TGG | + | chr1_3:35223431-35223450 | Msa0116310:CDS | 30.0% | |
| !! | TAGTCATGTTTTATTGATCC+AGG | + | chr1_3:35223601-35223620 | Msa0116310:intron | 30.0% |
| GTCTTCAAACTAAATAAACG+TGG | + | chr1_3:35223831-35223850 | Msa0116310:intron | 30.0% | |
| TTGGATAGACACAAATTACA+AGG | - | chr1_3:35223907-35223926 | None:intergenic | 30.0% | |
| !! | GAATTTGCTTCTCTAAAGTA+AGG | + | chr1_3:35224202-35224221 | Msa0116310:intron | 30.0% |
| GAAAGAAAAATAGAACTTGG+TGG | - | chr1_3:35224563-35224582 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTAATTGTCCAGAG+AGG | + | chr1_3:35224736-35224755 | Msa0116310:CDS | 30.0% |
| !! | AAATTTCTGAAGCTGGTTAA+TGG | - | chr1_3:35224867-35224886 | None:intergenic | 30.0% |
| ATGTACACAATCAGATTCTA+GGG | - | chr1_3:35224903-35224922 | None:intergenic | 30.0% | |
| AATGTACACAATCAGATTCT+AGG | - | chr1_3:35224904-35224923 | None:intergenic | 30.0% | |
| TAGAATCTGATTGTGTACAT+TGG | + | chr1_3:35224903-35224922 | Msa0116310:intron | 30.0% | |
| TACATTGGTATGTTAAAACC+TGG | + | chr1_3:35224918-35224937 | Msa0116310:intron | 30.0% | |
| ACATTGGTATGTTAAAACCT+GGG | + | chr1_3:35224919-35224938 | Msa0116310:intron | 30.0% | |
| TTGAAAATAAGAAGCAACCA+GGG | - | chr1_3:35224953-35224972 | None:intergenic | 30.0% | |
| CAGAAGATAATGAATAAGCA+GGG | - | chr1_3:35224995-35225014 | None:intergenic | 30.0% | |
| TCAGAAGATAATGAATAAGC+AGG | - | chr1_3:35224996-35225015 | None:intergenic | 30.0% | |
| ATTCAATAAAATGGGGTGAA+AGG | + | chr1_3:35225036-35225055 | Msa0116310:intron | 30.0% | |
| CATTTCCATTCAACTTTAGA+GGG | - | chr1_3:35225157-35225176 | None:intergenic | 30.0% | |
| ACATTTCCATTCAACTTTAG+AGG | - | chr1_3:35225158-35225177 | None:intergenic | 30.0% | |
| ATAGATTAAACAAGCACCTT+TGG | + | chr1_3:35225239-35225258 | Msa0116310:intron | 30.0% | |
| !!! | TTAAGCACATTTTTTCCAAG+TGG | + | chr1_3:35225446-35225465 | Msa0116310:intron | 30.0% |
| TATACAGGGCAACAATTTAA+TGG | - | chr1_3:35225510-35225529 | None:intergenic | 30.0% | |
| GATCATGTTAAACATGCTAT+TGG | + | chr1_3:35225719-35225738 | Msa0116310:intron | 30.0% | |
| GATAAGAATGTGAATGAGAA+TGG | - | chr1_3:35225761-35225780 | None:intergenic | 30.0% | |
| CAATACTTCTGTAGAAATTC+AGG | - | chr1_3:35225816-35225835 | None:intergenic | 30.0% | |
| !!! | TTTAAGTTGGTTTTCAGTCT+TGG | + | chr1_3:35226113-35226132 | Msa0116310:intron | 30.0% |
| AGTTTATTTGTGACAGATAG+AGG | + | chr1_3:35226275-35226294 | Msa0116310:intron | 30.0% | |
| ACAGATAACAACTTATCAAG+GGG | - | chr1_3:35226913-35226932 | None:intergenic | 30.0% | |
| CACAGATAACAACTTATCAA+GGG | - | chr1_3:35226914-35226933 | None:intergenic | 30.0% | |
| TCACAGATAACAACTTATCA+AGG | - | chr1_3:35226915-35226934 | None:intergenic | 30.0% | |
| GATAAGTTGTTATCTGTGAT+TGG | + | chr1_3:35226916-35226935 | Msa0116310:intron | 30.0% | |
| !! | ATTGGTTCTGGTATTACATA+TGG | + | chr1_3:35226934-35226953 | Msa0116310:intron | 30.0% |
| TTCTAGTGTTACAGTACATT+TGG | - | chr1_3:35227008-35227027 | None:intergenic | 30.0% | |
| GTTGTATGTGGACAAAATTT+GGG | + | chr1_3:35227065-35227084 | Msa0116310:intron | 30.0% | |
| AAAACTAGGTTAAGTTCTGT+AGG | - | chr1_3:35227251-35227270 | None:intergenic | 30.0% | |
| ! | TGAATTTGCTTCACTTCTTT+CGG | - | chr1_3:35227337-35227356 | None:intergenic | 30.0% |
| ! | ATGTAGCTCTCAAGTTATTT+TGG | - | chr1_3:35227402-35227421 | None:intergenic | 30.0% |
| ATGAAGGAGGCAAAAAATAA+GGG | - | chr1_3:35227513-35227532 | None:intergenic | 30.0% | |
| AATGAAGGAGGCAAAAAATA+AGG | - | chr1_3:35227514-35227533 | None:intergenic | 30.0% | |
| TGTATTCTACAATCTTTGGT+CGG | + | chr1_3:35227551-35227570 | Msa0116310:three_prime_UTR | 30.0% | |
| GACAAAAGAATAAGAGAGAA+AGG | + | chr1_3:35227582-35227601 | Msa0116310:three_prime_UTR | 30.0% | |
| AAAAGAATAAGAGAGAAAGG+TGG | + | chr1_3:35227585-35227604 | Msa0116310:three_prime_UTR | 30.0% | |
| AAAGAATAAGAGAGAAAGGT+GGG | + | chr1_3:35227586-35227605 | Msa0116310:three_prime_UTR | 30.0% | |
| !! | AAGGTTTCATTGCTTGTTTT+AGG | + | chr1_3:35227611-35227630 | Msa0116310:three_prime_UTR | 30.0% |
| TTGTGAACTGATAAAGTAGT+AGG | + | chr1_3:35227648-35227667 | Msa0116310:three_prime_UTR | 30.0% | |
| GTGAAAAATTTATATGGAGC+TGG | - | chr1_3:35227748-35227767 | None:intergenic | 30.0% | |
| TGCTCAGGCTATAAATTACA+AGG | - | chr1_3:35217979-35217998 | None:intergenic | 35.0% | |
| TTTCAAATAAAGCCCACATC+GGG | - | chr1_3:35218028-35218047 | None:intergenic | 35.0% | |
| CTTTCAAATAAAGCCCACAT+CGG | - | chr1_3:35218029-35218048 | None:intergenic | 35.0% | |
| ! | GATTGCAAAAGTGCAAAAAC+GGG | + | chr1_3:35218094-35218113 | Msa0116310:five_prime_UTR | 35.0% |
| AATTAGCATTTGCAGGTTCT+AGG | + | chr1_3:35218368-35218387 | Msa0116310:intron | 35.0% | |
| ATGTTGTGAAATAGTACCTG+CGG | - | chr1_3:35218458-35218477 | None:intergenic | 35.0% | |
| ACTGAATGTCAGTGTAAAAC+TGG | + | chr1_3:35218634-35218653 | Msa0116310:intron | 35.0% | |
| ! | GTTAGTAGTCTATCCCTTTT+AGG | - | chr1_3:35218872-35218891 | None:intergenic | 35.0% |
| TACAGTGTACACTATGTTGT+CGG | - | chr1_3:35218916-35218935 | None:intergenic | 35.0% | |
| TAGTAAGCATGTCAAACACT+TGG | - | chr1_3:35219237-35219256 | None:intergenic | 35.0% | |
| ATCTGTCATCATCTTTACTG+GGG | - | chr1_3:35219457-35219476 | None:intergenic | 35.0% | |
| CATCTGTCATCATCTTTACT+GGG | - | chr1_3:35219458-35219477 | None:intergenic | 35.0% | |
| ACATCTGTCATCATCTTTAC+TGG | - | chr1_3:35219459-35219478 | None:intergenic | 35.0% | |
| GCATCTTGTCGAAATGTATA+AGG | - | chr1_3:35219486-35219505 | None:intergenic | 35.0% | |
| GCCGATTACTCATATATTAC+AGG | + | chr1_3:35219504-35219523 | Msa0116310:CDS | 35.0% | |
| TATCAGACTCACATAAGGTT+TGG | - | chr1_3:35219598-35219617 | None:intergenic | 35.0% | |
| TATCGTATCAGACTCACATA+AGG | - | chr1_3:35219603-35219622 | None:intergenic | 35.0% | |
| AGCATTGCAAAATACATACC+GGG | - | chr1_3:35219666-35219685 | None:intergenic | 35.0% | |
| GATGATACCAGGAGAATTTA+TGG | - | chr1_3:35219697-35219716 | None:intergenic | 35.0% | |
| ! | ATGATGATGATGATGATACC+AGG | - | chr1_3:35219708-35219727 | None:intergenic | 35.0% |
| ATCATGATCATTGTCATCTC+TGG | + | chr1_3:35219750-35219769 | Msa0116310:intron | 35.0% | |
| ATGATGACCAAATTCATGGA+TGG | - | chr1_3:35220291-35220310 | None:intergenic | 35.0% | |
| ACACATGATGACCAAATTCA+TGG | - | chr1_3:35220295-35220314 | None:intergenic | 35.0% | |
| ! | TTTTTCTTGCCATGTCTTCT+AGG | + | chr1_3:35220319-35220338 | Msa0116310:intron | 35.0% |
| ! | TTTTCTTGCCATGTCTTCTA+GGG | + | chr1_3:35220320-35220339 | Msa0116310:intron | 35.0% |
| ! | TGCAGCATTGAATACATTCA+AGG | + | chr1_3:35220441-35220460 | Msa0116310:CDS | 35.0% |
| ! | CACATTTTAGACGGAAAAGT+TGG | - | chr1_3:35220623-35220642 | None:intergenic | 35.0% |
| TTTAAGTCTCCTCAATCGAA+CGG | + | chr1_3:35220645-35220664 | Msa0116310:intron | 35.0% | |
| AGATCCTTCCAGATATGATA+AGG | + | chr1_3:35220717-35220736 | Msa0116310:intron | 35.0% | |
| GATCCTTCCAGATATGATAA+GGG | + | chr1_3:35220718-35220737 | Msa0116310:intron | 35.0% | |
| ATCCTTCCAGATATGATAAG+GGG | + | chr1_3:35220719-35220738 | Msa0116310:CDS | 35.0% | |
| TACATCAGCATATACTGAAC+TGG | + | chr1_3:35220775-35220794 | Msa0116310:CDS | 35.0% | |
| ! | ACAGTAAGCTAGTTTCTTGA+AGG | - | chr1_3:35220804-35220823 | None:intergenic | 35.0% |
| AGCTTACTGTAACAACGTAA+AGG | + | chr1_3:35220814-35220833 | Msa0116310:CDS | 35.0% | |
| GAATACGAATGCAAAATGAG+AGG | + | chr1_3:35221147-35221166 | Msa0116310:CDS | 35.0% | |
| CGTGAACAAATTGCATAAGA+GGG | - | chr1_3:35221217-35221236 | None:intergenic | 35.0% | |
| TAACAATAGACAAAGCAGTC+TGG | - | chr1_3:35221240-35221259 | None:intergenic | 35.0% | |
| ATCTCATTAACTGTGAACGT+GGG | - | chr1_3:35221341-35221360 | None:intergenic | 35.0% | |
| TATCTCATTAACTGTGAACG+TGG | - | chr1_3:35221342-35221361 | None:intergenic | 35.0% | |
| ! | TTATTCTAGGAACGATCAGA+AGG | + | chr1_3:35221437-35221456 | Msa0116310:CDS | 35.0% |
| CATGTTTGGCAGATTAAAGA+TGG | + | chr1_3:35221518-35221537 | Msa0116310:intron | 35.0% | |
| !!! | AGATGGAGATCTTGTTTTGA+TGG | + | chr1_3:35221535-35221554 | Msa0116310:CDS | 35.0% |
| !!! | GATCTTGTTTTGATGGACAT+TGG | + | chr1_3:35221542-35221561 | Msa0116310:CDS | 35.0% |
| ACATTGGATGTGAGTTACAT+GGG | + | chr1_3:35221558-35221577 | Msa0116310:CDS | 35.0% | |
| GATTTCCCAAATACCTAGAT+AGG | - | chr1_3:35221670-35221689 | None:intergenic | 35.0% | |
| ATTAAGCCTATCATCGAATG+AGG | - | chr1_3:35221921-35221940 | None:intergenic | 35.0% | |
| ! | TATTGCACTTCTTTTGGACT+GGG | + | chr1_3:35221983-35222002 | Msa0116310:intron | 35.0% |
| TAAAAGTGACAAGACTGCAA+GGG | - | chr1_3:35222494-35222513 | None:intergenic | 35.0% | |
| TTAAAAGTGACAAGACTGCA+AGG | - | chr1_3:35222495-35222514 | None:intergenic | 35.0% | |
| ! | AGAAACTAACAAGCATTGTG+TGG | + | chr1_3:35222568-35222587 | Msa0116310:CDS | 35.0% |
| AAGAAAAAGGAGATACCGAA+TGG | - | chr1_3:35222634-35222653 | None:intergenic | 35.0% | |
| !! | GTTGATGATTGACATGGTAT+TGG | + | chr1_3:35222757-35222776 | Msa0116310:intron | 35.0% |
| TCTCTTTGATTAAGTGTGTC+TGG | + | chr1_3:35222782-35222801 | Msa0116310:intron | 35.0% | |
| TTGATTAAGTGTGTCTGGTT+TGG | + | chr1_3:35222787-35222806 | Msa0116310:intron | 35.0% | |
| ! | CCCTAAACATAATGCTTTTG+TGG | + | chr1_3:35222893-35222912 | Msa0116310:intron | 35.0% |
| ACACGCTATAAGTTGTTATG+AGG | + | chr1_3:35223128-35223147 | Msa0116310:intron | 35.0% | |
| GGTCTATAAAGAAGATACTC+AGG | - | chr1_3:35223293-35223312 | None:intergenic | 35.0% | |
| TGCTTTGTCAGCTAAAACAT+GGG | - | chr1_3:35223509-35223528 | None:intergenic | 35.0% | |
| ATGCTTTGTCAGCTAAAACA+TGG | - | chr1_3:35223510-35223529 | None:intergenic | 35.0% | |
| ATTGAACTGTTGTTCAGTCA+GGG | - | chr1_3:35223708-35223727 | None:intergenic | 35.0% | |
| TATTGAACTGTTGTTCAGTC+AGG | - | chr1_3:35223709-35223728 | None:intergenic | 35.0% | |
| ! | TTAATTTTCAGATGTGGGTG+AGG | + | chr1_3:35223740-35223759 | Msa0116310:intron | 35.0% |
| CCTTAGATGAAACCAATGTT+TGG | - | chr1_3:35223883-35223902 | None:intergenic | 35.0% | |
| !! | CCAAACATTGGTTTCATCTA+AGG | + | chr1_3:35223880-35223899 | Msa0116310:intron | 35.0% |
| !!! | AAGGGGAAATTTTGGAATGA+AGG | - | chr1_3:35223990-35224009 | None:intergenic | 35.0% |
| ! | ATAATTTGCCAGGTCTACAA+GGG | - | chr1_3:35224008-35224027 | None:intergenic | 35.0% |
| ! | TATAATTTGCCAGGTCTACA+AGG | - | chr1_3:35224009-35224028 | None:intergenic | 35.0% |
| !!! | AAGTTTTAGAGTTTACACCC+AGG | + | chr1_3:35224137-35224156 | Msa0116310:intron | 35.0% |
| !!! | AGTTTTAGAGTTTACACCCA+GGG | + | chr1_3:35224138-35224157 | Msa0116310:intron | 35.0% |
| ! | TAAAATGTGGTGATGATCAC+TGG | - | chr1_3:35224171-35224190 | None:intergenic | 35.0% |
| !! | TGTGTAAGGATAGTGTTGAT+TGG | + | chr1_3:35224246-35224265 | Msa0116310:intron | 35.0% |
| !! | AGTGTTGATTGGAGAATCAA+TGG | + | chr1_3:35224257-35224276 | Msa0116310:intron | 35.0% |
| AAGTGTGAGATTCACTTTAG+AGG | - | chr1_3:35224381-35224400 | None:intergenic | 35.0% | |
| ! | TTTTCATGGATTTGCCTCAT+CGG | - | chr1_3:35224404-35224423 | None:intergenic | 35.0% |
| !!! | TTGTTATTTTTTAGCGGGGT+AGG | + | chr1_3:35224456-35224475 | Msa0116310:intron | 35.0% |
| !!! | TGTTATTTTTTAGCGGGGTA+GGG | + | chr1_3:35224457-35224476 | Msa0116310:intron | 35.0% |
| CAGGTAATAACTATTGAACC+AGG | + | chr1_3:35224699-35224718 | Msa0116310:intron | 35.0% | |
| AACTTTAGTAAGTACCTCTC+TGG | - | chr1_3:35224753-35224772 | None:intergenic | 35.0% | |
| !! | AGAGGTAAAATTTCTGAAGC+TGG | - | chr1_3:35224874-35224893 | None:intergenic | 35.0% |
| CTTGAAAATAAGAAGCAACC+AGG | - | chr1_3:35224954-35224973 | None:intergenic | 35.0% | |
| !!! | CTGGTTGCTTCTTATTTTCA+AGG | + | chr1_3:35224952-35224971 | Msa0116310:intron | 35.0% |
| TAGGAGGTTAATCATTTCCA+AGG | + | chr1_3:35225094-35225113 | Msa0116310:intron | 35.0% | |
| AGGAGGTTAATCATTTCCAA+GGG | + | chr1_3:35225095-35225114 | Msa0116310:intron | 35.0% | |
| !! | TCATTCCCTCTAAAGTTGAA+TGG | + | chr1_3:35225149-35225168 | Msa0116310:intron | 35.0% |
| CTTGTAATAAGGGACATAGA+TGG | - | chr1_3:35225182-35225201 | None:intergenic | 35.0% | |
| !! | TCCAAAGGTGCTTGTAATAA+GGG | - | chr1_3:35225192-35225211 | None:intergenic | 35.0% |
| !! | ATCCAAAGGTGCTTGTAATA+AGG | - | chr1_3:35225193-35225212 | None:intergenic | 35.0% |
| AGTTAAGCAATGTAACCACA+AGG | + | chr1_3:35225350-35225369 | Msa0116310:intron | 35.0% | |
| CCTTAAATATAAGAGCCACT+TGG | - | chr1_3:35225464-35225483 | None:intergenic | 35.0% | |
| CCAAGTGGCTCTTATATTTA+AGG | + | chr1_3:35225461-35225480 | Msa0116310:intron | 35.0% | |
| ! | AGCTAGTTTAGTGGAAACTA+CGG | - | chr1_3:35225607-35225626 | None:intergenic | 35.0% |
| GCAGACCATGTAAAGTATAA+TGG | + | chr1_3:35225685-35225704 | Msa0116310:intron | 35.0% | |
| AGGAAAGGGAATGACTAAAA+TGG | - | chr1_3:35226024-35226043 | None:intergenic | 35.0% | |
| TGTAGCTGAAGTTAAGGAAA+GGG | - | chr1_3:35226038-35226057 | None:intergenic | 35.0% | |
| ATGTAGCTGAAGTTAAGGAA+AGG | - | chr1_3:35226039-35226058 | None:intergenic | 35.0% | |
| CAATCATGTAGCTGAAGTTA+AGG | - | chr1_3:35226044-35226063 | None:intergenic | 35.0% | |
| ACCAACTTAAATGCTCACAT+GGG | - | chr1_3:35226104-35226123 | None:intergenic | 35.0% | |
| AACCAACTTAAATGCTCACA+TGG | - | chr1_3:35226105-35226124 | None:intergenic | 35.0% | |
| GAGATTCTCATTACAGAAAC+AGG | + | chr1_3:35226206-35226225 | Msa0116310:CDS | 35.0% | |
| CATTACAGAAACAGGTTATG+AGG | + | chr1_3:35226214-35226233 | Msa0116310:CDS | 35.0% | |
| TTAAATAGATGGGACCCTAT+AGG | - | chr1_3:35226405-35226424 | None:intergenic | 35.0% | |
| TTTGCAAGCTGTTAAAGAAG+AGG | + | chr1_3:35226575-35226594 | Msa0116310:intron | 35.0% | |
| !! | TCATCATCAGCTTCACTTTT+TGG | + | chr1_3:35226618-35226637 | Msa0116310:intron | 35.0% |
| ! | CTGTGATAACCTTTTTCTCA+AGG | + | chr1_3:35226880-35226899 | Msa0116310:intron | 35.0% |
| ! | TTGTTATCTGTGATTGGTTC+TGG | + | chr1_3:35226922-35226941 | Msa0116310:intron | 35.0% |
| ! | ACATTTGGTTTCACCTTACA+TGG | - | chr1_3:35226993-35227012 | None:intergenic | 35.0% |
| GGTTGTATGTGGACAAAATT+TGG | + | chr1_3:35227064-35227083 | Msa0116310:intron | 35.0% | |
| TATTTAGAGAACATCACTGC+AGG | - | chr1_3:35227107-35227126 | None:intergenic | 35.0% | |
| TCCATGTGCATTAAAGAACT+GGG | + | chr1_3:35227435-35227454 | Msa0116310:three_prime_UTR | 35.0% | |
| CATTGCATTGTCAAAACTGT+TGG | + | chr1_3:35227473-35227492 | Msa0116310:three_prime_UTR | 35.0% | |
| TTGGAATGTTGCTCAAATGA+AGG | - | chr1_3:35227529-35227548 | None:intergenic | 35.0% | |
| GTATTCTACAATCTTTGGTC+GGG | + | chr1_3:35227552-35227571 | Msa0116310:three_prime_UTR | 35.0% | |
| AAGAATAAGAGAGAAAGGTG+GGG | + | chr1_3:35227587-35227606 | Msa0116310:three_prime_UTR | 35.0% | |
| !!! | TATTCCATGCCTGGTTTTAT+TGG | + | chr1_3:35227693-35227712 | Msa0116310:three_prime_UTR | 35.0% |
| ! | TCTTTCCTTTGTTGTAAAGC+CGG | - | chr1_3:35227803-35227822 | None:intergenic | 35.0% |
| CAAAGTAAAGTAGACTGCTC+AGG | - | chr1_3:35217994-35218013 | None:intergenic | 40.0% | |
| ! | TGATTTAAGACTACCCGATG+TGG | + | chr1_3:35218012-35218031 | Msa0116310:five_prime_UTR | 40.0% |
| ! | GATTTAAGACTACCCGATGT+GGG | + | chr1_3:35218013-35218032 | Msa0116310:five_prime_UTR | 40.0% |
| !! | CGATGTGGGCTTTATTTGAA+AGG | + | chr1_3:35218027-35218046 | Msa0116310:five_prime_UTR | 40.0% |
| GAGGGTTTAAGAGAGTAAGA+GGG | - | chr1_3:35218125-35218144 | None:intergenic | 40.0% | |
| AGAGGGTTTAAGAGAGTAAG+AGG | - | chr1_3:35218126-35218145 | None:intergenic | 40.0% | |
| TCGTTCTTATTCCAGTCACA+AGG | + | chr1_3:35218394-35218413 | Msa0116310:CDS | 40.0% | |
| ATCAACAGAAACCTTGTGAC+TGG | - | chr1_3:35218408-35218427 | None:intergenic | 40.0% | |
| CACAAGGTTTCTGTTGATGT+TGG | + | chr1_3:35218410-35218429 | Msa0116310:CDS | 40.0% | |
| TGTTGTGAAATAGTACCTGC+GGG | - | chr1_3:35218457-35218476 | None:intergenic | 40.0% | |
| CACCTAAGAGTAGAATGACA+TGG | + | chr1_3:35218594-35218613 | Msa0116310:intron | 40.0% | |
| TGCCATGTCATTCTACTCTT+AGG | - | chr1_3:35218599-35218618 | None:intergenic | 40.0% | |
| AAGAGAAGAGTGACTCACAA+AGG | + | chr1_3:35218773-35218792 | Msa0116310:intron | 40.0% | |
| !! | CTACCATTGTCTAGGACTTT+TGG | + | chr1_3:35219194-35219213 | Msa0116310:intron | 40.0% |
| ACTCCAAAAGTCCTAGACAA+TGG | - | chr1_3:35219200-35219219 | None:intergenic | 40.0% | |
| TATTCCTCACTAGATATGCC+TGG | - | chr1_3:35219369-35219388 | None:intergenic | 40.0% | |
| TGATAGCCAAACTCTTCTCT+GGG | - | chr1_3:35219425-35219444 | None:intergenic | 40.0% | |
| ATGATAGCCAAACTCTTCTC+TGG | - | chr1_3:35219426-35219445 | None:intergenic | 40.0% | |
| ACCAATGTCATGCCCTAAAA+TGG | - | chr1_3:35219553-35219572 | None:intergenic | 40.0% | |
| ACCTATGCCATAAATTCTCC+TGG | + | chr1_3:35219687-35219706 | Msa0116310:intron | 40.0% | |
| ACCAGGAGAATTTATGGCAT+AGG | - | chr1_3:35219691-35219710 | None:intergenic | 40.0% | |
| GGGTCATGCTAACAAGTTAA+AGG | + | chr1_3:35219859-35219878 | Msa0116310:intron | 40.0% | |
| ! | TTTTAATAAGTCCCTCGCAG+AGG | - | chr1_3:35220064-35220083 | None:intergenic | 40.0% |
| ACTAGTAGTATATAGAGGCC+AGG | + | chr1_3:35220100-35220119 | Msa0116310:intron | 40.0% | |
| ! | TCTAGGATGTGATTTGGCAA+GGG | + | chr1_3:35220401-35220420 | Msa0116310:intron | 40.0% |
| TCCAATGAGAAAGTTGAACG+AGG | + | chr1_3:35220477-35220496 | Msa0116310:CDS | 40.0% | |
| ACCTCGTTCAACTTTCTCAT+TGG | - | chr1_3:35220481-35220500 | None:intergenic | 40.0% | |
| AACCCCTTATCATATCTGGA+AGG | - | chr1_3:35220724-35220743 | None:intergenic | 40.0% | |
| ATCAGCATATACTGAACTGG+AGG | + | chr1_3:35220778-35220797 | Msa0116310:CDS | 40.0% | |
| ATCTGCATCAATTGCTTGTC+AGG | + | chr1_3:35220904-35220923 | Msa0116310:CDS | 40.0% | |
| AAAACCTAGAACTCCTAGTG+AGG | + | chr1_3:35220974-35220993 | Msa0116310:intron | 40.0% | |
| CAGCTAGCATACCTTCAAAA+GGG | - | chr1_3:35221119-35221138 | None:intergenic | 40.0% | |
| GCGTGAACAAATTGCATAAG+AGG | - | chr1_3:35221218-35221237 | None:intergenic | 40.0% | |
| GGATTGAATCTGATACAGAG+AGG | - | chr1_3:35221381-35221400 | None:intergenic | 40.0% | |
| GACATTGGATGTGAGTTACA+TGG | + | chr1_3:35221557-35221576 | Msa0116310:CDS | 40.0% | |
| GAACCAAAACATGCTAACCT+GGG | - | chr1_3:35221636-35221655 | None:intergenic | 40.0% | |
| ACTATACAGTCTGCTTGTCT+TGG | - | chr1_3:35221879-35221898 | None:intergenic | 40.0% | |
| GAGGACTACAATGGAAAACT+AGG | - | chr1_3:35221902-35221921 | None:intergenic | 40.0% | |
| TCATCGAATGAGGACTACAA+TGG | - | chr1_3:35221911-35221930 | None:intergenic | 40.0% | |
| TGTAGTCCTCATTCGATGAT+AGG | + | chr1_3:35221912-35221931 | Msa0116310:intron | 40.0% | |
| ! | GTATTGCACTTCTTTTGGAC+TGG | + | chr1_3:35221982-35222001 | Msa0116310:intron | 40.0% |
| TTTACTCAAGGTATGGATGC+TGG | - | chr1_3:35222084-35222103 | None:intergenic | 40.0% | |
| TCAGGGAACAAGAAACAACT+AGG | - | chr1_3:35222138-35222157 | None:intergenic | 40.0% | |
| ATCAGATCCCCTAAACAAAG+GGG | - | chr1_3:35222307-35222326 | None:intergenic | 40.0% | |
| CATCAGATCCCCTAAACAAA+GGG | - | chr1_3:35222308-35222327 | None:intergenic | 40.0% | |
| ACATCAGATCCCCTAAACAA+AGG | - | chr1_3:35222309-35222328 | None:intergenic | 40.0% | |
| TAAGACATTGGGATAGCAGA+AGG | - | chr1_3:35222385-35222404 | None:intergenic | 40.0% | |
| CCGAATGGTTGTGTATTTGT+CGG | - | chr1_3:35222619-35222638 | None:intergenic | 40.0% | |
| CCGACAAATACACAACCATT+CGG | + | chr1_3:35222616-35222635 | Msa0116310:CDS | 40.0% | |
| !! | TGTCTGGTTTGGTTTCACAT+TGG | + | chr1_3:35222798-35222817 | Msa0116310:intron | 40.0% |
| !! | GTCTGGTTTGGTTTCACATT+GGG | + | chr1_3:35222799-35222818 | Msa0116310:intron | 40.0% |
| AGATAGACACTAAGCACAGA+CGG | - | chr1_3:35223315-35223334 | None:intergenic | 40.0% | |
| AAACAGTGAACCGTGTGAAA+TGG | + | chr1_3:35223365-35223384 | Msa0116310:intron | 40.0% | |
| TAGAAGTTGGGTTCAGCTTA+TGG | - | chr1_3:35223469-35223488 | None:intergenic | 40.0% | |
| AAGCTGAACCCAACTTCTAT+AGG | + | chr1_3:35223470-35223489 | Msa0116310:CDS | 40.0% | |
| ATTGATCCAGGTCACTATCT+AGG | + | chr1_3:35223613-35223632 | Msa0116310:intron | 40.0% | |
| ! | AGGTCTACAAGGGGAAATTT+TGG | - | chr1_3:35223998-35224017 | None:intergenic | 40.0% |
| AAAATTTCCCCTTGTAGACC+TGG | + | chr1_3:35223997-35224016 | Msa0116310:intron | 40.0% | |
| ! | TAATTTGCCAGGTCTACAAG+GGG | - | chr1_3:35224007-35224026 | None:intergenic | 40.0% |
| CATATTTGAACGACAAGTGC+CGG | - | chr1_3:35224608-35224627 | None:intergenic | 40.0% | |
| !! | TTCTGAAGCTGGTTAATGGT+AGG | - | chr1_3:35224863-35224882 | None:intergenic | 40.0% |
| ! | CAGATTCTAGGGAAAATGAG+AGG | - | chr1_3:35224892-35224911 | None:intergenic | 40.0% |
| TGGTATGTTAAAACCTGGGT+TGG | + | chr1_3:35224923-35224942 | Msa0116310:intron | 40.0% | |
| GGAGGTTAATCATTTCCAAG+GGG | + | chr1_3:35225096-35225115 | Msa0116310:intron | 40.0% | |
| GAGGTTAATCATTTCCAAGG+GGG | + | chr1_3:35225097-35225116 | Msa0116310:intron | 40.0% | |
| ATAGAATAAGAACTCCCCCT+TGG | - | chr1_3:35225114-35225133 | None:intergenic | 40.0% | |
| TCCCTTATTACAAGCACCTT+TGG | + | chr1_3:35225188-35225207 | Msa0116310:intron | 40.0% | |
| CAGGGCAACAATTTAATGGT+TGG | - | chr1_3:35225506-35225525 | None:intergenic | 40.0% | |
| ! | GCTAGTTTAGTGGAAACTAC+GGG | - | chr1_3:35225606-35225625 | None:intergenic | 40.0% |
| TTTATGACAGACCTACCCTT+GGG | - | chr1_3:35225634-35225653 | None:intergenic | 40.0% | |
| ! | TTTTATGACAGACCTACCCT+TGG | - | chr1_3:35225635-35225654 | None:intergenic | 40.0% |
| !! | TTCCTTTGATTTGAACCTGC+TGG | + | chr1_3:35225788-35225807 | Msa0116310:intron | 40.0% |
| !! | TCCTTTGATTTGAACCTGCT+GGG | + | chr1_3:35225789-35225808 | Msa0116310:intron | 40.0% |
| ACTGCATACATGTCTCTTGA+TGG | - | chr1_3:35225856-35225875 | None:intergenic | 40.0% | |
| AAGAGACATGTATGCAGTCT+TGG | + | chr1_3:35225858-35225877 | Msa0116310:intron | 40.0% | |
| GATCTCAATCTCACGTTGTT+AGG | + | chr1_3:35226067-35226086 | Msa0116310:intron | 40.0% | |
| AAATGCTCACATGGGATACA+TGG | - | chr1_3:35226096-35226115 | None:intergenic | 40.0% | |
| TCCCATGTGAGCATTTAAGT+TGG | + | chr1_3:35226100-35226119 | Msa0116310:intron | 40.0% | |
| TTGTACGTGATCTCTAATGC+AGG | + | chr1_3:35226153-35226172 | Msa0116310:intron | 40.0% | |
| CAAGCTGTTAAAGAAGAGGA+CGG | + | chr1_3:35226579-35226598 | Msa0116310:intron | 40.0% | |
| TCCATCACTTAATCATGCAC+TGG | - | chr1_3:35226855-35226874 | None:intergenic | 40.0% | |
| GGAAGATGGAACACGTTTAA+TGG | - | chr1_3:35226972-35226991 | None:intergenic | 40.0% | |
| GTTTCACCTTACATGGAAGA+TGG | - | chr1_3:35226986-35227005 | None:intergenic | 40.0% | |
| TACAACCACACACAGAGAAA+AGG | - | chr1_3:35227051-35227070 | None:intergenic | 40.0% | |
| GGAGTGTGTGTCATAAAACT+AGG | - | chr1_3:35227265-35227284 | None:intergenic | 40.0% | |
| CTTTCGGAATTGATGCTGTT+AGG | - | chr1_3:35227321-35227340 | None:intergenic | 40.0% | |
| ATGGCTGAAGTTGTTTAGCA+AGG | - | chr1_3:35227362-35227381 | None:intergenic | 40.0% | |
| TTGCTAAACAACTTCAGCCA+TGG | + | chr1_3:35227361-35227380 | Msa0116310:CDS | 40.0% | |
| AAACAACTTCAGCCATGGAA+TGG | + | chr1_3:35227366-35227385 | Msa0116310:CDS | 40.0% | |
| AACAACTTCAGCCATGGAAT+GGG | + | chr1_3:35227367-35227386 | Msa0116310:CDS | 40.0% | |
| GTCCATGTGCATTAAAGAAC+TGG | + | chr1_3:35227434-35227453 | Msa0116310:three_prime_UTR | 40.0% | |
| CCATGTGCATTAAAGAACTG+GGG | + | chr1_3:35227436-35227455 | Msa0116310:three_prime_UTR | 40.0% | |
| AGGAGGCAAAAAATAAGGGA+TGG | - | chr1_3:35227509-35227528 | None:intergenic | 40.0% | |
| GAATGTTGCTCAAATGAAGG+AGG | - | chr1_3:35227526-35227545 | None:intergenic | 40.0% | |
| GCATGGAATATGCAGCAATT+AGG | - | chr1_3:35227683-35227702 | None:intergenic | 40.0% | |
| TACACCAATAAAACCAGGCA+TGG | - | chr1_3:35227700-35227719 | None:intergenic | 40.0% | |
| !! | TTACACCGGCTTTACAACAA+AGG | + | chr1_3:35227795-35227814 | Msa0116310:three_prime_UTR | 40.0% |
| AGAAGAGTGACTCACAAAGG+CGG | + | chr1_3:35218776-35218795 | Msa0116310:intron | 45.0% | |
| ! | CACTATGTTGTCGGACCTTT+TGG | - | chr1_3:35218907-35218926 | None:intergenic | 45.0% |
| ATCCCAAAAGCTAGCTCAAG+TGG | - | chr1_3:35218960-35218979 | None:intergenic | 45.0% | |
| ! | GATGGACGTACATGTTGACT+GGG | - | chr1_3:35218993-35219012 | None:intergenic | 45.0% |
| ! | TGATGGACGTACATGTTGAC+TGG | - | chr1_3:35218994-35219013 | None:intergenic | 45.0% |
| !!! | GCCATTTTAGGGCATGACAT+TGG | + | chr1_3:35219549-35219568 | Msa0116310:CDS | 45.0% |
| ! | CTCACATAAGGTTTGGCTTC+TGG | - | chr1_3:35219591-35219610 | None:intergenic | 45.0% |
| GAGCGAACCATCCATGAATT+TGG | + | chr1_3:35220281-35220300 | Msa0116310:intron | 45.0% | |
| ! | GTCTAGGATGTGATTTGGCA+AGG | + | chr1_3:35220400-35220419 | Msa0116310:intron | 45.0% |
| GAATACATTCAAGGCCAACG+AGG | + | chr1_3:35220450-35220469 | Msa0116310:CDS | 45.0% | |
| ! | TTTTCATCGATACGCCTTGC+TGG | + | chr1_3:35220578-35220597 | Msa0116310:intron | 45.0% |
| GACGGAAAAGTTGGCATCAT+TGG | - | chr1_3:35220614-35220633 | None:intergenic | 45.0% | |
| GAGAAGTAACCGTTCGATTG+AGG | - | chr1_3:35220657-35220676 | None:intergenic | 45.0% | |
| GAGGAACCCCTTATCATATC+TGG | - | chr1_3:35220728-35220747 | None:intergenic | 45.0% | |
| ! | TTTTATCCATCGCAGCCGAT+GGG | - | chr1_3:35220855-35220874 | None:intergenic | 45.0% |
| ! | ATTTTATCCATCGCAGCCGA+TGG | - | chr1_3:35220856-35220875 | None:intergenic | 45.0% |
| ! | TTCATCAGCTTGAGCTCTGA+AGG | - | chr1_3:35220881-35220900 | None:intergenic | 45.0% |
| TTCAGAGCTCAAGCTGATGA+AGG | + | chr1_3:35220880-35220899 | Msa0116310:CDS | 45.0% | |
| CTGCATATAACAGCCTCACT+AGG | - | chr1_3:35220990-35221009 | None:intergenic | 45.0% | |
| AGGAGGTCATAGATGCCAAA+TGG | + | chr1_3:35221018-35221037 | Msa0116310:intron | 45.0% | |
| GCAGCTAGCATACCTTCAAA+AGG | - | chr1_3:35221120-35221139 | None:intergenic | 45.0% | |
| ! | TGAAGGTATGCTAGCTGCAA+AGG | + | chr1_3:35221122-35221141 | Msa0116310:CDS | 45.0% |
| CTGTATCAGATTCAATCCCG+TGG | + | chr1_3:35221383-35221402 | Msa0116310:intron | 45.0% | |
| ATCAGATTCAATCCCGTGGT+TGG | + | chr1_3:35221387-35221406 | Msa0116310:intron | 45.0% | |
| GGAACCAAAACATGCTAACC+TGG | - | chr1_3:35221637-35221656 | None:intergenic | 45.0% | |
| GTTCCCTGACAAAATGCAGA+TGG | + | chr1_3:35222149-35222168 | Msa0116310:intron | 45.0% | |
| ! | CCACCATCTGCATTTTGTCA+GGG | - | chr1_3:35222155-35222174 | None:intergenic | 45.0% |
| ! | TAAACAAAGGGGGCATGAAG+AGG | - | chr1_3:35222296-35222315 | None:intergenic | 45.0% |
| ! | TCTTCATGCCCCCTTTGTTT+AGG | + | chr1_3:35222295-35222314 | Msa0116310:intron | 45.0% |
| ! | CTTCATGCCCCCTTTGTTTA+GGG | + | chr1_3:35222296-35222315 | Msa0116310:intron | 45.0% |
| ! | TTCATGCCCCCTTTGTTTAG+GGG | + | chr1_3:35222297-35222316 | Msa0116310:intron | 45.0% |
| TCAGATCCCCTAAACAAAGG+GGG | - | chr1_3:35222306-35222325 | None:intergenic | 45.0% | |
| ATACCCGACATATGGCATGT+GGG | + | chr1_3:35222344-35222363 | Msa0116310:intron | 45.0% | |
| TGTGTGGAACTTTGTAAGCC+TGG | + | chr1_3:35222584-35222603 | Msa0116310:CDS | 45.0% | |
| ATTTGTCGGATACTAGCACC+AGG | - | chr1_3:35222605-35222624 | None:intergenic | 45.0% | |
| AAACAACCATAGTGTGCCAG+TGG | + | chr1_3:35223267-35223286 | Msa0116310:intron | 45.0% | |
| AAAGAAGATACTCAGGCCAC+TGG | - | chr1_3:35223286-35223305 | None:intergenic | 45.0% | |
| GATAGACACTAAGCACAGAC+GGG | - | chr1_3:35223314-35223333 | None:intergenic | 45.0% | |
| TGCAACCAGACCATTTCACA+CGG | - | chr1_3:35223378-35223397 | None:intergenic | 45.0% | |
| ! | CAGGTTGAAATGCTGCAGAA+AGG | + | chr1_3:35223398-35223417 | Msa0116310:intron | 45.0% |
| AATGCTGCAGAAAGGACTCA+AGG | + | chr1_3:35223406-35223425 | Msa0116310:CDS | 45.0% | |
| AGTTGGGTTCAGCTTATGGT+AGG | - | chr1_3:35223465-35223484 | None:intergenic | 45.0% | |
| CCAGGCTACCTATAGAAGTT+GGG | - | chr1_3:35223481-35223500 | None:intergenic | 45.0% | |
| ACCAGGCTACCTATAGAAGT+TGG | - | chr1_3:35223482-35223501 | None:intergenic | 45.0% | |
| TCCAGGTCACTATCTAGGAA+TGG | + | chr1_3:35223618-35223637 | Msa0116310:intron | 45.0% | |
| TCCATTCCTAGATAGTGACC+TGG | - | chr1_3:35223622-35223641 | None:intergenic | 45.0% | |
| CTGAACGAGTGCTTCAAACT+TGG | - | chr1_3:35223926-35223945 | None:intergenic | 45.0% | |
| AAGTAAGGGCTGCACTTAAG+AGG | + | chr1_3:35224217-35224236 | Msa0116310:intron | 45.0% | |
| TGAATCTCACACTTCCGATG+AGG | + | chr1_3:35224387-35224406 | Msa0116310:intron | 45.0% | |
| !!! | TATTTTTTAGCGGGGTAGGG+TGG | + | chr1_3:35224460-35224479 | Msa0116310:intron | 45.0% |
| !!! | ATTTTTTAGCGGGGTAGGGT+GGG | + | chr1_3:35224461-35224480 | Msa0116310:intron | 45.0% |
| AAAGATGGGATGTACACTCC+TGG | - | chr1_3:35224720-35224739 | None:intergenic | 45.0% | |
| !! | TGGAAACTACGGGTTGGTAA+AGG | - | chr1_3:35225596-35225615 | None:intergenic | 45.0% |
| GTTTAGTGGAAACTACGGGT+TGG | - | chr1_3:35225602-35225621 | None:intergenic | 45.0% | |
| TTATGACAGACCTACCCTTG+GGG | - | chr1_3:35225633-35225652 | None:intergenic | 45.0% | |
| TCCCAGCAGGTTCAAATCAA+AGG | - | chr1_3:35225793-35225812 | None:intergenic | 45.0% | |
| GATCTCTAATGCAGGTACCA+AGG | + | chr1_3:35226161-35226180 | Msa0116310:intron | 45.0% | |
| TAATGCAGGTACCAAGGCAT+TGG | + | chr1_3:35226167-35226186 | Msa0116310:intron | 45.0% | |
| ! | AATGCAGGTACCAAGGCATT+GGG | + | chr1_3:35226168-35226187 | Msa0116310:intron | 45.0% |
| CAATCCTTATCCCAATGCCT+TGG | - | chr1_3:35226181-35226200 | None:intergenic | 45.0% | |
| !! | AGGCATTGGGATAAGGATTG+AGG | + | chr1_3:35226181-35226200 | Msa0116310:CDS | 45.0% |
| GATGGGACCCTATAGGAAAA+AGG | - | chr1_3:35226398-35226417 | None:intergenic | 45.0% | |
| GCCAGTGCATGATTAAGTGA+TGG | + | chr1_3:35226851-35226870 | Msa0116310:intron | 45.0% | |
| GGCTGCTATCCTTGAGAAAA+AGG | - | chr1_3:35226892-35226911 | None:intergenic | 45.0% | |
| CGTGTTCCATCTTCCATGTA+AGG | + | chr1_3:35226977-35226996 | Msa0116310:intron | 45.0% | |
| ! | AGTGACCTTTTCTCTGTGTG+TGG | + | chr1_3:35227043-35227062 | Msa0116310:intron | 45.0% |
| TCTCTGTGTGTGGTTGTATG+TGG | + | chr1_3:35227053-35227072 | Msa0116310:intron | 45.0% | |
| ACAACTTCAGCCATGGAATG+GGG | + | chr1_3:35227368-35227387 | Msa0116310:CDS | 45.0% | |
| CCCCAGTTCTTTAATGCACA+TGG | - | chr1_3:35227439-35227458 | None:intergenic | 45.0% | |
| TCTACAATCTTTGGTCGGGA+AGG | + | chr1_3:35227556-35227575 | Msa0116310:three_prime_UTR | 45.0% | |
| CTACAATCTTTGGTCGGGAA+GGG | + | chr1_3:35227557-35227576 | Msa0116310:three_prime_UTR | 45.0% | |
| TACAATCTTTGGTCGGGAAG+GGG | + | chr1_3:35227558-35227577 | Msa0116310:three_prime_UTR | 45.0% | |
| ATTGCTGCATATTCCATGCC+TGG | + | chr1_3:35227684-35227703 | Msa0116310:three_prime_UTR | 45.0% | |
| !!! | AAATAATAATTTAATTTTGA+AGG | - | chr1_3:35218484-35218503 | None:intergenic | 5.0% |
| !! | AAAATATATTTATTCATAAT+CGG | - | chr1_3:35220221-35220240 | None:intergenic | 5.0% |
| !! | TTTATAAATATTAAATAGAT+GGG | - | chr1_3:35226415-35226434 | None:intergenic | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTAA+AGG | - | chr1_3:35226534-35226553 | None:intergenic | 5.0% |
| !! | GCTCGATTTGTTGTGTCTCG+TGG | - | chr1_3:35218072-35218091 | None:intergenic | 50.0% |
| AAAGCTAGCTCAAGTGGCGA+GGG | - | chr1_3:35218954-35218973 | None:intergenic | 50.0% | |
| AAAAGCTAGCTCAAGTGGCG+AGG | - | chr1_3:35218955-35218974 | None:intergenic | 50.0% | |
| !!! | TCGCCACTTGAGCTAGCTTT+TGG | + | chr1_3:35218954-35218973 | Msa0116310:intron | 50.0% |
| !!! | CGCCACTTGAGCTAGCTTTT+GGG | + | chr1_3:35218955-35218974 | Msa0116310:intron | 50.0% |
| ! | ACGTACATGTTGACTGGGCT+TGG | - | chr1_3:35218988-35219007 | None:intergenic | 50.0% |
| AAAGATGGGGAGATCACACC+AGG | + | chr1_3:35219348-35219367 | Msa0116310:CDS | 50.0% | |
| CACACCAGGCATATCTAGTG+AGG | + | chr1_3:35219362-35219381 | Msa0116310:CDS | 50.0% | |
| GCTTCTCCCAGAGAAGAGTT+TGG | + | chr1_3:35219416-35219435 | Msa0116310:CDS | 50.0% | |
| ATTACAGGCTGCCAACAACC+TGG | + | chr1_3:35219519-35219538 | Msa0116310:CDS | 50.0% | |
| !! | CTGGTGGTGTGGCCATTTTA+GGG | + | chr1_3:35219538-35219557 | Msa0116310:CDS | 50.0% |
| ATGCCTAAAGAACCTCTGCG+AGG | + | chr1_3:35220049-35220068 | Msa0116310:intron | 50.0% | |
| TGCCTAAAGAACCTCTGCGA+GGG | + | chr1_3:35220050-35220069 | Msa0116310:intron | 50.0% | |
| ! | ATTTGGCAAGGGCATGTAGC+AGG | + | chr1_3:35220412-35220431 | Msa0116310:CDS | 50.0% |
| TCTCATTGGATACGCCTCGT+TGG | - | chr1_3:35220467-35220486 | None:intergenic | 50.0% | |
| ! | TTTATACCCATCGGCTGCGA+TGG | + | chr1_3:35220846-35220865 | Msa0116310:CDS | 50.0% |
| ACAGCCTCACTAGGAGTTCT+AGG | - | chr1_3:35220981-35221000 | None:intergenic | 50.0% | |
| AGATTCAATCCCGTGGTTGG+TGG | + | chr1_3:35221390-35221409 | Msa0116310:intron | 50.0% | |
| GAAGAGAAGCTACCACAAGG+TGG | - | chr1_3:35221611-35221630 | None:intergenic | 50.0% | |
| GCAGAAGAGAAGCTACCACA+AGG | - | chr1_3:35221614-35221633 | None:intergenic | 50.0% | |
| ! | CTGCCCAGGTTAGCATGTTT+TGG | + | chr1_3:35221630-35221649 | Msa0116310:intron | 50.0% |
| CCCTGACAAAATGCAGATGG+TGG | + | chr1_3:35222152-35222171 | Msa0116310:intron | 50.0% | |
| ! | GCCACCATCTGCATTTTGTC+AGG | - | chr1_3:35222156-35222175 | None:intergenic | 50.0% |
| CATACCCGACATATGGCATG+TGG | + | chr1_3:35222343-35222362 | Msa0116310:intron | 50.0% | |
| TACCCGACATATGGCATGTG+GGG | + | chr1_3:35222345-35222364 | Msa0116310:intron | 50.0% | |
| GTGAACCGTGTGAAATGGTC+TGG | + | chr1_3:35223370-35223389 | Msa0116310:intron | 50.0% | |
| GTGAAATGGTCTGGTTGCAC+AGG | + | chr1_3:35223379-35223398 | Msa0116310:intron | 50.0% | |
| CAGAAAGGACTCAAGGAGGT+TGG | + | chr1_3:35223413-35223432 | Msa0116310:CDS | 50.0% | |
| CCCAACTTCTATAGGTAGCC+TGG | + | chr1_3:35223478-35223497 | Msa0116310:intron | 50.0% | |
| !! | TTTGACTGTCCTCTGAAGCC+AGG | + | chr1_3:35223667-35223686 | Msa0116310:CDS | 50.0% |
| CTTACAACACCTGGCTTCAG+AGG | - | chr1_3:35223679-35223698 | None:intergenic | 50.0% | |
| !! | GGGAAAGCACTTACAACACC+TGG | - | chr1_3:35223688-35223707 | None:intergenic | 50.0% |
| !! | GATCACTGGAAAGTGTCCCT+GGG | - | chr1_3:35224157-35224176 | None:intergenic | 50.0% |
| !! | TGATCACTGGAAAGTGTCCC+TGG | - | chr1_3:35224158-35224177 | None:intergenic | 50.0% |
| GGATGGGAAGGAAGTAGTGT+TGG | + | chr1_3:35224482-35224501 | Msa0116310:intron | 50.0% | |
| ! | AAACCTGGGTTGGATAACCC+TGG | + | chr1_3:35224933-35224952 | Msa0116310:intron | 50.0% |
| AAGGTAGAGCCATGACGATG+CGG | - | chr1_3:35225577-35225596 | None:intergenic | 50.0% | |
| ! | TTGGGGTGGAGCTAGTTTAG+TGG | - | chr1_3:35225616-35225635 | None:intergenic | 50.0% |
| ACTAAACTAGCTCCACCCCA+AGG | + | chr1_3:35225615-35225634 | Msa0116310:intron | 50.0% | |
| CTAAACTAGCTCCACCCCAA+GGG | + | chr1_3:35225616-35225635 | Msa0116310:intron | 50.0% | |
| GTAGAAATTCAGGTCCCAGC+AGG | - | chr1_3:35225806-35225825 | None:intergenic | 50.0% | |
| !! | GGTACCAAGGCATTGGGATA+AGG | + | chr1_3:35226174-35226193 | Msa0116310:intron | 50.0% |
| CAACTTCAGCCATGGAATGG+GGG | + | chr1_3:35227369-35227388 | Msa0116310:CDS | 50.0% | |
| TGCACATGGACAGTATCAGC+TGG | - | chr1_3:35227425-35227444 | None:intergenic | 50.0% | |
| ACAATCTTTGGTCGGGAAGG+GGG | + | chr1_3:35227559-35227578 | Msa0116310:three_prime_UTR | 50.0% | |
| TAAGAGAGAAAGGTGGGGCA+AGG | + | chr1_3:35227592-35227611 | Msa0116310:three_prime_UTR | 50.0% | |
| AAGCTAGCTCAAGTGGCGAG+GGG | - | chr1_3:35218953-35218972 | None:intergenic | 55.0% | |
| CCTAAAATGGCCACACCACC+AGG | - | chr1_3:35219540-35219559 | None:intergenic | 55.0% | |
| !! | CCTGGTGGTGTGGCCATTTT+AGG | + | chr1_3:35219537-35219556 | Msa0116310:CDS | 55.0% |
| GTCCCTCGCAGAGGTTCTTT+AGG | - | chr1_3:35220055-35220074 | None:intergenic | 55.0% | |
| TCATCGATACGCCTTGCTGG+TGG | + | chr1_3:35220581-35220600 | Msa0116310:intron | 55.0% | |
| ! | AATGAGAGGTGCGCAGCGAA+TGG | + | chr1_3:35221161-35221180 | Msa0116310:CDS | 55.0% |
| ! | ATGAGAGGTGCGCAGCGAAT+GGG | + | chr1_3:35221162-35221181 | Msa0116310:CDS | 55.0% |
| !! | TTCAATCCCGTGGTTGGTGG+TGG | + | chr1_3:35221393-35221412 | Msa0116310:CDS | 55.0% |
| !! | TCAATCCCGTGGTTGGTGGT+GGG | + | chr1_3:35221394-35221413 | Msa0116310:CDS | 55.0% |
| ATTAGGCCCACCACCAACCA+CGG | - | chr1_3:35221403-35221422 | None:intergenic | 55.0% | |
| TGGTAGCTTCTCTTCTGCCC+AGG | + | chr1_3:35221616-35221635 | Msa0116310:CDS | 55.0% | |
| GTCGGGTATGTGCAGGCTTT+AGG | - | chr1_3:35222333-35222352 | None:intergenic | 55.0% | |
| GCCTGCACATACCCGACATA+TGG | + | chr1_3:35222336-35222355 | Msa0116310:intron | 55.0% | |
| GCCATATGTCGGGTATGTGC+AGG | - | chr1_3:35222340-35222359 | None:intergenic | 55.0% | |
| TGCCCCACATGCCATATGTC+GGG | - | chr1_3:35222350-35222369 | None:intergenic | 55.0% | |
| CTGCCCCACATGCCATATGT+CGG | - | chr1_3:35222351-35222370 | None:intergenic | 55.0% | |
| GCTGCAGAAAGGACTCAAGG+AGG | + | chr1_3:35223409-35223428 | Msa0116310:CDS | 55.0% | |
| GCTAAAACATGGGCGTGACC+AGG | - | chr1_3:35223499-35223518 | None:intergenic | 55.0% | |
| CAACCAGGGTTATCCAACCC+AGG | - | chr1_3:35224939-35224958 | None:intergenic | 55.0% | |
| GGCTATCAACCCCCATTCCA+TGG | - | chr1_3:35227381-35227400 | None:intergenic | 55.0% | |
| CAATCTTTGGTCGGGAAGGG+GGG | + | chr1_3:35227560-35227579 | Msa0116310:three_prime_UTR | 55.0% | |
| TACCTGCGGGTGAGATGCAG+GGG | - | chr1_3:35218444-35218463 | None:intergenic | 60.0% | |
| GTACCTGCGGGTGAGATGCA+GGG | - | chr1_3:35218445-35218464 | None:intergenic | 60.0% | |
| AGTACCTGCGGGTGAGATGC+AGG | - | chr1_3:35218446-35218465 | None:intergenic | 60.0% | |
| ACAGGCTGCCAACAACCTGG+TGG | + | chr1_3:35219522-35219541 | Msa0116310:CDS | 60.0% | |
| ! | CTGCCAACAACCTGGTGGTG+TGG | + | chr1_3:35219527-35219546 | Msa0116310:CDS | 60.0% |
| TGGCCACACCACCAGGTTGT+TGG | - | chr1_3:35219533-35219552 | None:intergenic | 60.0% | |
| TTGGCTGCAAGCCACCAGCA+AGG | - | chr1_3:35220595-35220614 | None:intergenic | 60.0% | |
| ! | TGAGAGGTGCGCAGCGAATG+GGG | + | chr1_3:35221163-35221182 | Msa0116310:CDS | 60.0% |
| TTAGGCCCACCACCAACCAC+GGG | - | chr1_3:35221402-35221421 | None:intergenic | 60.0% | |
| !! | GTGGTTGGTGGTGGGCCTAA+TGG | + | chr1_3:35221402-35221421 | Msa0116310:CDS | 60.0% |
| TCAGCGATCTCACGCGTACC+TGG | + | chr1_3:35221585-35221604 | Msa0116310:CDS | 60.0% | |
| GAAGCTACCACAAGGTGGCC+AGG | - | chr1_3:35221606-35221625 | None:intergenic | 60.0% | |
| CTCAGGCCACTGGCACACTA+TGG | - | chr1_3:35223276-35223295 | None:intergenic | 60.0% | |
| TTTAGCGGGGTAGGGTGGGA+TGG | + | chr1_3:35224465-35224484 | Msa0116310:intron | 60.0% | |
| TTAGCGGGGTAGGGTGGGAT+GGG | + | chr1_3:35224466-35224485 | Msa0116310:intron | 60.0% | |
| GATGCGGCACAGGTAGGAGT+AGG | - | chr1_3:35225561-35225580 | None:intergenic | 60.0% | |
| CATGACGATGCGGCACAGGT+AGG | - | chr1_3:35225567-35225586 | None:intergenic | 60.0% | |
| CTACCTGTGCCGCATCGTCA+TGG | + | chr1_3:35225565-35225584 | Msa0116310:intron | 60.0% | |
| ACTAGCTCCACCCCAAGGGT+AGG | + | chr1_3:35225620-35225639 | Msa0116310:intron | 60.0% | |
| TGACAGACCTACCCTTGGGG+TGG | - | chr1_3:35225630-35225649 | None:intergenic | 60.0% | |
| TGCGGGTGAGATGCAGGGGT+TGG | - | chr1_3:35218440-35218459 | None:intergenic | 65.0% | |
| AACCCCTGCATCTCACCCGC+AGG | + | chr1_3:35218439-35218458 | Msa0116310:CDS | 65.0% | |
| ACGCGTACCTGGCCACCTTG+TGG | + | chr1_3:35221596-35221615 | Msa0116310:CDS | 65.0% | |
| GAGCCATGACGATGCGGCAC+AGG | - | chr1_3:35225571-35225590 | None:intergenic | 65.0% | |
| CGGGGTAGGGTGGGATGGGA+AGG | + | chr1_3:35224470-35224489 | Msa0116310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 35217970 | 35227844 | 35217970 | ID=Msa0116310;Name=Msa0116310 |
| chr1_3 | mRNA | 35217970 | 35227844 | 35217970 | ID=Msa0116310-mRNA-1;Parent=Msa0116310;Name=Msa0116310-mRNA-1;_AED=0.14;_eAED=0.14;_QI=247|0.92|0.92|1|1|1|14|415|484 |
| chr1_3 | exon | 35217970 | 35218264 | 35217970 | ID=Msa0116310-mRNA-1:exon:11270;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35218383 | 35218460 | 35218383 | ID=Msa0116310-mRNA-1:exon:11271;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35219342 | 35219605 | 35219342 | ID=Msa0116310-mRNA-1:exon:11272;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35220406 | 35220498 | 35220406 | ID=Msa0116310-mRNA-1:exon:11273;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35220719 | 35220925 | 35220719 | ID=Msa0116310-mRNA-1:exon:11274;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35221081 | 35221184 | 35221081 | ID=Msa0116310-mRNA-1:exon:11275;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35221392 | 35221458 | 35221392 | ID=Msa0116310-mRNA-1:exon:11276;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35221530 | 35221637 | 35221530 | ID=Msa0116310-mRNA-1:exon:11277;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35222545 | 35222637 | 35222545 | ID=Msa0116310-mRNA-1:exon:11278;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35223401 | 35223491 | 35223401 | ID=Msa0116310-mRNA-1:exon:11279;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35223623 | 35223693 | 35223623 | ID=Msa0116310-mRNA-1:exon:11280;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35224702 | 35224757 | 35224702 | ID=Msa0116310-mRNA-1:exon:11281;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35226175 | 35226235 | 35226175 | ID=Msa0116310-mRNA-1:exon:11282;Parent=Msa0116310-mRNA-1 |
| chr1_3 | exon | 35227316 | 35227844 | 35227316 | ID=Msa0116310-mRNA-1:exon:11283;Parent=Msa0116310-mRNA-1 |
| chr1_3 | five_prime_UTR | 35217970 | 35218216 | 35217970 | ID=Msa0116310-mRNA-1:five_prime_utr;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35218217 | 35218264 | 35218217 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35218383 | 35218460 | 35218383 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35219342 | 35219605 | 35219342 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35220406 | 35220498 | 35220406 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35220719 | 35220925 | 35220719 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35221081 | 35221184 | 35221081 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35221392 | 35221458 | 35221392 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35221530 | 35221637 | 35221530 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35222545 | 35222637 | 35222545 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35223401 | 35223491 | 35223401 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35223623 | 35223693 | 35223623 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35224702 | 35224757 | 35224702 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35226175 | 35226235 | 35226175 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | CDS | 35227316 | 35227429 | 35227316 | ID=Msa0116310-mRNA-1:cds;Parent=Msa0116310-mRNA-1 |
| chr1_3 | three_prime_UTR | 35227430 | 35227844 | 35227430 | ID=Msa0116310-mRNA-1:three_prime_utr;Parent=Msa0116310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
