AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116830 MtrunA17_Chr1g0173421 97.552 286 7 0 30 315 1 286 0.0 586
Msa0116830 MtrunA17_Chr7g0257681 65.854 287 77 2 30 314 1 268 5.62e-130 371
Msa0116830 MtrunA17_Chr6g0451591 44.172 163 76 3 7 166 34 184 2.00e-38 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116830 AT2G41835.1 63.066 287 96 3 30 315 1 278 5.51e-129 369
Msa0116830 AT3G57480.2 53.659 287 95 2 30 316 1 249 2.66e-107 313
Msa0116830 AT3G57480.1 53.659 287 95 2 30 316 1 249 2.66e-107 313
Msa0116830 AT3G28210.2 40.741 189 82 4 27 212 1 162 1.25e-38 135
Msa0116830 AT3G28210.1 40.741 189 82 4 27 212 1 162 1.25e-38 135
Msa0116830 AT5G48205.1 53.211 109 23 3 30 135 1 84 1.17e-28 109

Find 77 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTCTTCTTGTTCTTCT+TGG 0.051744 1_3:-36310256 Msa0116830:CDS
TTTCCTAGATCTGGAAATTC+TGG 0.237504 1_3:+36310223 None:intergenic
CTATTCATTAGATTCATAAA+AGG 0.242926 1_3:+36308649 None:intergenic
CTTCTTGTTCTTCTTGGAAT+GGG 0.278833 1_3:-36310250 Msa0116830:CDS
CAACCTCCTCTTCATCTAAA+TGG 0.298522 1_3:-36308591 Msa0116830:CDS
ATATCTTGTTGCTGTAAAAC+TGG 0.300732 1_3:+36308125 None:intergenic
TGATTCTCCCATGTTATGTT+TGG 0.324605 1_3:+36308868 None:intergenic
AGAAATTGTACTTTCTGAAA+TGG 0.333254 1_3:-36308192 Msa0116830:three_prime_UTR
TCTTCTTGTTCTTCTTGGAA+TGG 0.361452 1_3:-36310251 Msa0116830:CDS
GTAACTTTCTCATAATTTGA+TGG 0.361749 1_3:+36308826 None:intergenic
ATCTCTTTGCATCCAGCTGC+AGG 0.399699 1_3:+36308787 None:intergenic
TGCTTCTAATATTCGAGCTT+CGG 0.402334 1_3:-36308548 Msa0116830:CDS
GGTCCTGGACATTTGTGATC+AGG 0.415571 1_3:+36308694 None:intergenic
TTGGATCTTGCTCAGGAACT+AGG 0.441768 1_3:+36308887 None:intergenic
TACAGCAACAAGATATGAAA+AGG 0.445440 1_3:-36308118 Msa0116830:three_prime_UTR
CACTTGCGATCGCTGCTACC+AGG 0.446006 1_3:-36310155 Msa0116830:intron
TATTCATTAGATTCATAAAA+GGG 0.454261 1_3:+36308650 None:intergenic
ATTCGAGCTTCGGCTGAGGC+TGG 0.454635 1_3:-36308538 Msa0116830:CDS
GTTATGTTTGGATCTTGCTC+AGG 0.458286 1_3:+36308880 None:intergenic
ATTTCTGTCTACATTGCTGT+TGG 0.460149 1_3:-36308069 Msa0116830:three_prime_UTR
AGTAGTGATCGAGGAAAACT+TGG 0.461509 1_3:+36308408 None:intergenic
ATATGTCCACTCTGCGCTAA+AGG 0.469963 1_3:-36308916 Msa0116830:CDS
AGAGGAGGTTGAACTTGAGT+TGG 0.472577 1_3:+36308603 None:intergenic
TAGACCATTGTTTGAAGCAT+AGG 0.474728 1_3:-36308723 Msa0116830:CDS
ACTCCAGAATTTCCAGATCT+AGG 0.478228 1_3:-36310226 Msa0116830:CDS
TAACTTTCTCATAATTTGAT+GGG 0.483060 1_3:+36308827 None:intergenic
GTGGTGAAATTAACCAAGCC+TGG 0.484928 1_3:-36308501 Msa0116830:CDS
TCTCAAACACAATTAAATGC+AGG 0.489246 1_3:-36308756 Msa0116830:CDS
TATGCTGGATGAATTTATCC+AGG 0.493035 1_3:+36308163 None:intergenic
CTCAAACACAATTAAATGCA+GGG 0.496678 1_3:-36308755 Msa0116830:CDS
CATTGTTTGAAGCATAGGTT+TGG 0.498039 1_3:-36308718 Msa0116830:CDS
AAAACTTGGCACCGCATTGA+GGG 0.499599 1_3:+36308422 None:intergenic
TTCTTGTTCTTCTTGGAATG+GGG 0.506109 1_3:-36310249 Msa0116830:CDS
TGTAGTCCATTTAGATGAAG+AGG 0.514775 1_3:+36308585 None:intergenic
GAAATCAACGAGCTTGCAAT+CGG 0.515709 1_3:+36310186 None:intergenic
CACAGATCCCGTGTCCCTTG+TGG 0.520415 1_3:-36308290 Msa0116830:CDS
TTTCTGAAATGGATAGTGCC+TGG 0.522098 1_3:-36308181 Msa0116830:three_prime_UTR
GCGTGTCCTAAGTGTAGTAA+AGG 0.526636 1_3:-36308316 Msa0116830:CDS
CCCTCTCAACATGCTCCACA+AGG 0.529390 1_3:+36308275 None:intergenic
GTGAATCCTTTACTACACTT+AGG 0.538962 1_3:+36308310 None:intergenic
ACACTTAGGACACGCATCAA+TGG 0.539521 1_3:+36308324 None:intergenic
GGTCCTGATCACAAATGTCC+AGG 0.548572 1_3:-36308697 Msa0116830:CDS
AGAGACAAATGTTTATATGC+TGG 0.548816 1_3:+36308148 None:intergenic
CTCGGAAATTTATATTGCGA+AGG 0.549126 1_3:-36310326 None:intergenic
GAAAACTTGGCACCGCATTG+AGG 0.550498 1_3:+36308421 None:intergenic
TGGTGAAATTAACCAAGCCT+GGG 0.551641 1_3:-36308500 Msa0116830:CDS
AGCAAGATCCAAACATAACA+TGG 0.557990 1_3:-36308876 Msa0116830:CDS
TAATATTCGAGCTTCGGCTG+AGG 0.559139 1_3:-36308542 Msa0116830:CDS
GGGAGAAAGAGCAACGGCAG+TGG 0.567326 1_3:-36308460 Msa0116830:CDS
CAAACCTATGCTTCAAACAA+TGG 0.573057 1_3:+36308719 None:intergenic
AACATGCTCCACAAGGGACA+CGG 0.573079 1_3:+36308282 None:intergenic
GAGCAACGGCAGTGGTCAAG+TGG 0.573351 1_3:-36308452 Msa0116830:CDS
ACCGATGTTTGATATAACTT+CGG 0.574169 1_3:+36308974 None:intergenic
TGGTGGCACTTCTAGAACAT+AGG 0.575559 1_3:-36308248 Msa0116830:exon
TATTGCGAAGGAGTTAGTCA+AGG 0.593259 1_3:-36310314 Msa0116830:CDS
TAGCAGCGATCGCAAGTGAA+AGG 0.598354 1_3:+36310160 None:intergenic
ACATGCTCCACAAGGGACAC+GGG 0.604172 1_3:+36308283 None:intergenic
TGGTAACATTCGCAACAGAT+CGG 0.605303 1_3:+36308344 None:intergenic
ATAATTTGATGGGTCGCAGT+CGG 0.619214 1_3:+36308837 None:intergenic
AGTCCATTTAGATGAAGAGG+AGG 0.622955 1_3:+36308588 None:intergenic
TCTCTTTGCATCCAGCTGCA+GGG 0.624481 1_3:+36308788 None:intergenic
GAGCATGTTGAGAGGGAACA+TGG 0.625868 1_3:-36308268 Msa0116830:CDS
CCCTTGTGGAGCATGTTGAG+AGG 0.626858 1_3:-36308276 Msa0116830:CDS
CGAAGGAGTTAGTCAAGGAG+AGG 0.629197 1_3:-36310309 Msa0116830:CDS
ATCGATTAAAGTAGTGATCG+AGG 0.631399 1_3:+36308399 None:intergenic
CCTTGTGGAGCATGTTGAGA+GGG 0.637426 1_3:-36308275 Msa0116830:CDS
CGGACTCCTTTAGCGCAGAG+TGG 0.642605 1_3:+36308910 None:intergenic
ACCGAAGTTATATCAAACAT+CGG 0.669814 1_3:-36308975 Msa0116830:CDS
GCAAGATCCAAACATAACAT+GGG 0.676319 1_3:-36308875 Msa0116830:CDS
CCTCTCAACATGCTCCACAA+GGG 0.702395 1_3:+36308276 None:intergenic
GGTGAAATTAACCAAGCCTG+GGG 0.712063 1_3:-36308499 Msa0116830:CDS
AATGGTGGGAGAAAGAGCAA+CGG 0.715605 1_3:-36308466 Msa0116830:CDS
GATCTTGCTCAGGAACTAGG+CGG 0.720155 1_3:+36308890 None:intergenic
GCTGGAATGTCAAAGTTGAG+TGG 0.723894 1_3:-36308520 Msa0116830:CDS
GTGAAATTAACCAAGCCTGG+GGG 0.745657 1_3:-36308498 Msa0116830:CDS
GTGGAGCAATGCCCTCAATG+CGG 0.747142 1_3:-36308433 Msa0116830:CDS
CATGTTGAGAGGGAACATGG+TGG 0.749762 1_3:-36308265 Msa0116830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCATATAAGCTATTTTTT+GGG + chr1_3:36308510-36308529 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_3:36308511-36308530 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_3:36308941-36308960 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_3:36308942-36308961 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_3:36309210-36309229 Msa0116830:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_3:36309736-36309755 None:intergenic 15.0%
!!! AATCATATAAGCTATTTTTT+GGG + chr1_3:36308510-36308529 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_3:36308511-36308530 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_3:36308941-36308960 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_3:36308942-36308961 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_3:36309210-36309229 Msa0116830:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_3:36309736-36309755 None:intergenic 15.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_3:36308264-36308283 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_3:36308331-36308350 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_3:36308332-36308351 None:intergenic 20.0%
!!! TTTTGACCTAGATTTTATTA+GGG - chr1_3:36308377-36308396 Msa0116830:CDS 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_3:36308509-36308528 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_3:36308798-36308817 Msa0116830:CDS 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_3:36309559-36309578 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_3:36309713-36309732 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_3:36309737-36309756 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_3:36309735-36309754 Msa0116830:intron 20.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_3:36308264-36308283 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_3:36308331-36308350 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_3:36308332-36308351 None:intergenic 20.0%
!!! TTTTGACCTAGATTTTATTA+GGG - chr1_3:36308377-36308396 Msa0116830:CDS 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_3:36308509-36308528 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_3:36308798-36308817 Msa0116830:CDS 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_3:36309559-36309578 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_3:36309713-36309732 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_3:36309737-36309756 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_3:36309735-36309754 Msa0116830:intron 20.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_3:36308305-36308324 None:intergenic 25.0%
!! CTTTTGACCTAGATTTTATT+AGG - chr1_3:36308376-36308395 Msa0116830:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_3:36308384-36308403 Msa0116830:CDS 25.0%
!!! CTTTATTTGGATTTTATCTC+AGG - chr1_3:36308447-36308466 Msa0116830:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_3:36308528-36308547 Msa0116830:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_3:36308603-36308622 Msa0116830:CDS 25.0%
! TTATTCGATAAGCTGTTATA+GGG + chr1_3:36308682-36308701 None:intergenic 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_3:36308683-36308702 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_3:36308738-36308757 Msa0116830:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_3:36308803-36308822 Msa0116830:CDS 25.0%
! TATCATGTGAACAAATTAGA+AGG - chr1_3:36308964-36308983 Msa0116830:CDS 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_3:36309176-36309195 Msa0116830:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_3:36309180-36309199 None:intergenic 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_3:36309560-36309579 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_3:36309748-36309767 Msa0116830:intron 25.0%
!! AGAAATTGTACTTTCTGAAA+TGG - chr1_3:36310191-36310210 Msa0116830:CDS 25.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_3:36308305-36308324 None:intergenic 25.0%
!! CTTTTGACCTAGATTTTATT+AGG - chr1_3:36308376-36308395 Msa0116830:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_3:36308384-36308403 Msa0116830:CDS 25.0%
!!! CTTTATTTGGATTTTATCTC+AGG - chr1_3:36308447-36308466 Msa0116830:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_3:36308528-36308547 Msa0116830:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_3:36308603-36308622 Msa0116830:CDS 25.0%
! TTATTCGATAAGCTGTTATA+GGG + chr1_3:36308682-36308701 None:intergenic 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_3:36308683-36308702 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_3:36308738-36308757 Msa0116830:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_3:36308803-36308822 Msa0116830:CDS 25.0%
! TATCATGTGAACAAATTAGA+AGG - chr1_3:36308964-36308983 Msa0116830:CDS 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_3:36309176-36309195 Msa0116830:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_3:36309180-36309199 None:intergenic 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_3:36309560-36309579 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_3:36309748-36309767 Msa0116830:intron 25.0%
!! AGAAATTGTACTTTCTGAAA+TGG - chr1_3:36310191-36310210 Msa0116830:CDS 25.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_3:36308386-36308405 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_3:36308383-36308402 Msa0116830:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_3:36308391-36308410 Msa0116830:CDS 30.0%
AAATCGAAACTACCGTTAAA+TGG + chr1_3:36308420-36308439 None:intergenic 30.0%
! CGATTTTCGAAGACTTTATT+TGG - chr1_3:36308434-36308453 Msa0116830:CDS 30.0%
TATAGCTTTCTCAAAAGTCA+CGG + chr1_3:36308587-36308606 None:intergenic 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_3:36309013-36309032 None:intergenic 30.0%
CAAACGGTTTATCAAAACTA+CGG - chr1_3:36309075-36309094 Msa0116830:intron 30.0%
! TGCATGAACTTTAGAAGTTA+AGG + chr1_3:36309240-36309259 None:intergenic 30.0%
!! TATTTTGCTTGATGACATTC+TGG - chr1_3:36309281-36309300 Msa0116830:intron 30.0%
!! ATTTTGCTTGATGACATTCT+GGG - chr1_3:36309282-36309301 Msa0116830:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_3:36309385-36309404 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_3:36309386-36309405 None:intergenic 30.0%
ACCGAAGTTATATCAAACAT+CGG - chr1_3:36309408-36309427 Msa0116830:intron 30.0%
ACCGATGTTTGATATAACTT+CGG + chr1_3:36309412-36309431 None:intergenic 30.0%
TCTCAAACACAATTAAATGC+AGG - chr1_3:36309627-36309646 Msa0116830:intron 30.0%
CTCAAACACAATTAAATGCA+GGG - chr1_3:36309628-36309647 Msa0116830:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_3:36310013-36310032 Msa0116830:intron 30.0%
AGAGACAAATGTTTATATGC+TGG + chr1_3:36310238-36310257 None:intergenic 30.0%
ATATCTTGTTGCTGTAAAAC+TGG + chr1_3:36310261-36310280 None:intergenic 30.0%
TACAGCAACAAGATATGAAA+AGG - chr1_3:36310265-36310284 Msa0116830:CDS 30.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_3:36308386-36308405 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_3:36308383-36308402 Msa0116830:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_3:36308391-36308410 Msa0116830:CDS 30.0%
AAATCGAAACTACCGTTAAA+TGG + chr1_3:36308420-36308439 None:intergenic 30.0%
! CGATTTTCGAAGACTTTATT+TGG - chr1_3:36308434-36308453 Msa0116830:CDS 30.0%
TATAGCTTTCTCAAAAGTCA+CGG + chr1_3:36308587-36308606 None:intergenic 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_3:36309013-36309032 None:intergenic 30.0%
CAAACGGTTTATCAAAACTA+CGG - chr1_3:36309075-36309094 Msa0116830:intron 30.0%
! TGCATGAACTTTAGAAGTTA+AGG + chr1_3:36309240-36309259 None:intergenic 30.0%
!! TATTTTGCTTGATGACATTC+TGG - chr1_3:36309281-36309300 Msa0116830:intron 30.0%
!! ATTTTGCTTGATGACATTCT+GGG - chr1_3:36309282-36309301 Msa0116830:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_3:36309385-36309404 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_3:36309386-36309405 None:intergenic 30.0%
ACCGAAGTTATATCAAACAT+CGG - chr1_3:36309408-36309427 Msa0116830:intron 30.0%
ACCGATGTTTGATATAACTT+CGG + chr1_3:36309412-36309431 None:intergenic 30.0%
TCTCAAACACAATTAAATGC+AGG - chr1_3:36309627-36309646 Msa0116830:intron 30.0%
CTCAAACACAATTAAATGCA+GGG - chr1_3:36309628-36309647 Msa0116830:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_3:36310013-36310032 Msa0116830:intron 30.0%
AGAGACAAATGTTTATATGC+TGG + chr1_3:36310238-36310257 None:intergenic 30.0%
ATATCTTGTTGCTGTAAAAC+TGG + chr1_3:36310261-36310280 None:intergenic 30.0%
TACAGCAACAAGATATGAAA+AGG - chr1_3:36310265-36310284 Msa0116830:CDS 30.0%
CTTGTTCTTCTTGTTCTTCT+TGG - chr1_3:36308127-36308146 Msa0116830:three_prime_UTR 35.0%
TCTTCTTGTTCTTCTTGGAA+TGG - chr1_3:36308132-36308151 Msa0116830:three_prime_UTR 35.0%
CTTCTTGTTCTTCTTGGAAT+GGG - chr1_3:36308133-36308152 Msa0116830:three_prime_UTR 35.0%
TTCTTGTTCTTCTTGGAATG+GGG - chr1_3:36308134-36308153 Msa0116830:three_prime_UTR 35.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_3:36308163-36308182 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+CGG - chr1_3:36308405-36308424 Msa0116830:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_3:36308647-36308666 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_3:36308650-36308669 Msa0116830:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_3:36308808-36308827 Msa0116830:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_3:36308814-36308833 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_3:36308871-36308890 None:intergenic 35.0%
TATAACACTGCAGAGTCAAA+CGG - chr1_3:36309059-36309078 Msa0116830:intron 35.0%
ACTACGGTATTGCAGAAAAT+AGG - chr1_3:36309091-36309110 Msa0116830:intron 35.0%
CTACGGTATTGCAGAAAATA+GGG - chr1_3:36309092-36309111 Msa0116830:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_3:36309370-36309389 Msa0116830:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_3:36309380-36309399 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_3:36309382-36309401 Msa0116830:intron 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_3:36309507-36309526 Msa0116830:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_3:36309508-36309527 Msa0116830:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_3:36309518-36309537 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_3:36309660-36309679 Msa0116830:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_3:36309667-36309686 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_3:36309665-36309684 Msa0116830:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_3:36309801-36309820 None:intergenic 35.0%
TGCTTCTAATATTCGAGCTT+CGG - chr1_3:36309835-36309854 Msa0116830:intron 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_3:36309987-36310006 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_3:36310076-36310095 None:intergenic 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_3:36310223-36310242 None:intergenic 35.0%
ATTTCTGTCTACATTGCTGT+TGG - chr1_3:36310314-36310333 Msa0116830:CDS 35.0%
CTTGTTCTTCTTGTTCTTCT+TGG - chr1_3:36308127-36308146 Msa0116830:three_prime_UTR 35.0%
TCTTCTTGTTCTTCTTGGAA+TGG - chr1_3:36308132-36308151 Msa0116830:three_prime_UTR 35.0%
CTTCTTGTTCTTCTTGGAAT+GGG - chr1_3:36308133-36308152 Msa0116830:three_prime_UTR 35.0%
TTCTTGTTCTTCTTGGAATG+GGG - chr1_3:36308134-36308153 Msa0116830:three_prime_UTR 35.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_3:36308163-36308182 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+CGG - chr1_3:36308405-36308424 Msa0116830:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_3:36308647-36308666 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_3:36308650-36308669 Msa0116830:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_3:36308808-36308827 Msa0116830:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_3:36308814-36308833 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_3:36308871-36308890 None:intergenic 35.0%
TATAACACTGCAGAGTCAAA+CGG - chr1_3:36309059-36309078 Msa0116830:intron 35.0%
ACTACGGTATTGCAGAAAAT+AGG - chr1_3:36309091-36309110 Msa0116830:intron 35.0%
CTACGGTATTGCAGAAAATA+GGG - chr1_3:36309092-36309111 Msa0116830:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_3:36309370-36309389 Msa0116830:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_3:36309380-36309399 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_3:36309382-36309401 Msa0116830:intron 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_3:36309507-36309526 Msa0116830:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_3:36309508-36309527 Msa0116830:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_3:36309518-36309537 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_3:36309660-36309679 Msa0116830:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_3:36309667-36309686 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_3:36309665-36309684 Msa0116830:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_3:36309801-36309820 None:intergenic 35.0%
TGCTTCTAATATTCGAGCTT+CGG - chr1_3:36309835-36309854 Msa0116830:intron 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_3:36309987-36310006 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_3:36310076-36310095 None:intergenic 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_3:36310223-36310242 None:intergenic 35.0%
ATTTCTGTCTACATTGCTGT+TGG - chr1_3:36310314-36310333 Msa0116830:CDS 35.0%
TATTGCGAAGGAGTTAGTCA+AGG - chr1_3:36308069-36308088 Msa0116830:three_prime_UTR 40.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_3:36308157-36308176 Msa0116830:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_3:36308200-36308219 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_3:36308249-36308268 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_3:36308287-36308306 None:intergenic 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_3:36308561-36308580 Msa0116830:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_3:36308642-36308661 Msa0116830:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_3:36308648-36308667 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_3:36308749-36308768 Msa0116830:CDS 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_3:36309366-36309385 None:intergenic 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_3:36309506-36309525 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_3:36309549-36309568 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_3:36309700-36309719 Msa0116830:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_3:36309707-36309726 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_3:36309792-36309811 Msa0116830:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_3:36309798-36309817 None:intergenic 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_3:36309883-36309902 Msa0116830:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_3:36309978-36309997 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_3:36310042-36310061 None:intergenic 40.0%
!! TTTCTGAAATGGATAGTGCC+TGG - chr1_3:36310202-36310221 Msa0116830:CDS 40.0%
TATTGCGAAGGAGTTAGTCA+AGG - chr1_3:36308069-36308088 Msa0116830:three_prime_UTR 40.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_3:36308157-36308176 Msa0116830:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_3:36308200-36308219 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_3:36308249-36308268 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_3:36308287-36308306 None:intergenic 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_3:36308561-36308580 Msa0116830:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_3:36308642-36308661 Msa0116830:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_3:36308648-36308667 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_3:36308749-36308768 Msa0116830:CDS 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_3:36309366-36309385 None:intergenic 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_3:36309506-36309525 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_3:36309549-36309568 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_3:36309700-36309719 Msa0116830:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_3:36309707-36309726 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_3:36309792-36309811 Msa0116830:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_3:36309798-36309817 None:intergenic 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_3:36309883-36309902 Msa0116830:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_3:36309978-36309997 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_3:36310042-36310061 None:intergenic 40.0%
!! TTTCTGAAATGGATAGTGCC+TGG - chr1_3:36310202-36310221 Msa0116830:CDS 40.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_3:36308172-36308191 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_3:36308818-36308837 Msa0116830:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_3:36308828-36308847 Msa0116830:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_3:36308829-36308848 Msa0116830:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_3:36308835-36308854 Msa0116830:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_3:36308836-36308855 Msa0116830:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_3:36308985-36309004 Msa0116830:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_3:36309001-36309020 Msa0116830:intron 45.0%
! CTTGATGACATTCTGGGTTG+TGG - chr1_3:36309288-36309307 Msa0116830:intron 45.0%
ATATGTCCACTCTGCGCTAA+AGG - chr1_3:36309467-36309486 Msa0116830:intron 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_3:36309499-36309518 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_3:36309783-36309802 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_3:36309841-36309860 Msa0116830:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_3:36309863-36309882 Msa0116830:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_3:36309882-36309901 Msa0116830:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_3:36309884-36309903 Msa0116830:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_3:36309885-36309904 Msa0116830:intron 45.0%
! AATGGTGGGAGAAAGAGCAA+CGG - chr1_3:36309917-36309936 Msa0116830:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_3:36309964-36309983 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_3:36310062-36310081 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_3:36310067-36310086 Msa0116830:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_3:36310135-36310154 Msa0116830:intron 45.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_3:36308172-36308191 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_3:36308818-36308837 Msa0116830:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_3:36308828-36308847 Msa0116830:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_3:36308829-36308848 Msa0116830:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_3:36308835-36308854 Msa0116830:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_3:36308836-36308855 Msa0116830:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_3:36308985-36309004 Msa0116830:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_3:36309001-36309020 Msa0116830:intron 45.0%
! CTTGATGACATTCTGGGTTG+TGG - chr1_3:36309288-36309307 Msa0116830:intron 45.0%
ATATGTCCACTCTGCGCTAA+AGG - chr1_3:36309467-36309486 Msa0116830:intron 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_3:36309499-36309518 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_3:36309783-36309802 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_3:36309841-36309860 Msa0116830:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_3:36309863-36309882 Msa0116830:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_3:36309882-36309901 Msa0116830:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_3:36309884-36309903 Msa0116830:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_3:36309885-36309904 Msa0116830:intron 45.0%
! AATGGTGGGAGAAAGAGCAA+CGG - chr1_3:36309917-36309936 Msa0116830:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_3:36309964-36309983 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_3:36310062-36310081 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_3:36310067-36310086 Msa0116830:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_3:36310135-36310154 Msa0116830:intron 45.0%
CGAAGGAGTTAGTCAAGGAG+AGG - chr1_3:36308074-36308093 Msa0116830:three_prime_UTR 50.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_3:36308226-36308245 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_3:36308573-36308592 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_3:36309496-36309515 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_3:36309584-36309603 Msa0116830:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_3:36309598-36309617 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_3:36309599-36309618 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_3:36309686-36309705 Msa0116830:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_3:36309692-36309711 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_3:36309965-36309984 None:intergenic 50.0%
AACATGCTCCACAAGGGACA+CGG + chr1_3:36310104-36310123 None:intergenic 50.0%
CCTCTCAACATGCTCCACAA+GGG + chr1_3:36310110-36310129 None:intergenic 50.0%
CCTTGTGGAGCATGTTGAGA+GGG - chr1_3:36310108-36310127 Msa0116830:intron 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_3:36310115-36310134 Msa0116830:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_3:36310118-36310137 Msa0116830:intron 50.0%
CGAAGGAGTTAGTCAAGGAG+AGG - chr1_3:36308074-36308093 Msa0116830:three_prime_UTR 50.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_3:36308226-36308245 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_3:36308573-36308592 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_3:36309496-36309515 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_3:36309584-36309603 Msa0116830:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_3:36309598-36309617 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_3:36309599-36309618 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_3:36309686-36309705 Msa0116830:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_3:36309692-36309711 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_3:36309965-36309984 None:intergenic 50.0%
AACATGCTCCACAAGGGACA+CGG + chr1_3:36310104-36310123 None:intergenic 50.0%
CCTCTCAACATGCTCCACAA+GGG + chr1_3:36310110-36310129 None:intergenic 50.0%
CCTTGTGGAGCATGTTGAGA+GGG - chr1_3:36310108-36310127 Msa0116830:intron 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_3:36310115-36310134 Msa0116830:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_3:36310118-36310137 Msa0116830:intron 50.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_3:36308567-36308586 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_3:36309903-36309922 None:intergenic 55.0%
TGGGGGACATCAAGCAATGG+TGG - chr1_3:36309902-36309921 Msa0116830:intron 55.0%
GGGGGACATCAAGCAATGGT+GGG - chr1_3:36309903-36309922 Msa0116830:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_3:36309950-36309969 Msa0116830:intron 55.0%
ACATGCTCCACAAGGGACAC+GGG + chr1_3:36310103-36310122 None:intergenic 55.0%
CCCTTGTGGAGCATGTTGAG+AGG - chr1_3:36310107-36310126 Msa0116830:intron 55.0%
CCCTCTCAACATGCTCCACA+AGG + chr1_3:36310111-36310130 None:intergenic 55.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_3:36308567-36308586 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_3:36309903-36309922 None:intergenic 55.0%
TGGGGGACATCAAGCAATGG+TGG - chr1_3:36309902-36309921 Msa0116830:intron 55.0%
GGGGGACATCAAGCAATGGT+GGG - chr1_3:36309903-36309922 Msa0116830:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_3:36309950-36309969 Msa0116830:intron 55.0%
ACATGCTCCACAAGGGACAC+GGG + chr1_3:36310103-36310122 None:intergenic 55.0%
CCCTTGTGGAGCATGTTGAG+AGG - chr1_3:36310107-36310126 Msa0116830:intron 55.0%
CCCTCTCAACATGCTCCACA+AGG + chr1_3:36310111-36310130 None:intergenic 55.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_3:36308228-36308247 Msa0116830:three_prime_UTR 60.0%
CGGACTCCTTTAGCGCAGAG+TGG + chr1_3:36309476-36309495 None:intergenic 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_3:36309845-36309864 Msa0116830:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_3:36309898-36309917 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_3:36309899-36309918 Msa0116830:intron 60.0%
GGGAGAAAGAGCAACGGCAG+TGG - chr1_3:36309923-36309942 Msa0116830:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_3:36309931-36309950 Msa0116830:intron 60.0%
CACAGATCCCGTGTCCCTTG+TGG - chr1_3:36310093-36310112 Msa0116830:intron 60.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_3:36308228-36308247 Msa0116830:three_prime_UTR 60.0%
CGGACTCCTTTAGCGCAGAG+TGG + chr1_3:36309476-36309495 None:intergenic 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_3:36309845-36309864 Msa0116830:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_3:36309898-36309917 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_3:36309899-36309918 Msa0116830:intron 60.0%
GGGAGAAAGAGCAACGGCAG+TGG - chr1_3:36309923-36309942 Msa0116830:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_3:36309931-36309950 Msa0116830:intron 60.0%
CACAGATCCCGTGTCCCTTG+TGG - chr1_3:36310093-36310112 Msa0116830:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 36308064 36310341 36308064 ID=Msa0116830;Name=Msa0116830
chr1_3 mRNA 36308064 36310341 36308064 ID=Msa0116830-mRNA-1;Parent=Msa0116830;Name=Msa0116830-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|1|1|1|1|2|185|316
chr1_3 exon 36308064 36309013 36308064 ID=Msa0116830-mRNA-1:exon:11709;Parent=Msa0116830-mRNA-1
chr1_3 exon 36310156 36310341 36310156 ID=Msa0116830-mRNA-1:exon:11708;Parent=Msa0116830-mRNA-1
chr1_3 CDS 36310156 36310341 36310156 ID=Msa0116830-mRNA-1:cds;Parent=Msa0116830-mRNA-1
chr1_3 CDS 36308249 36309013 36308249 ID=Msa0116830-mRNA-1:cds;Parent=Msa0116830-mRNA-1
chr1_3 three_prime_UTR 36308064 36308248 36308064 ID=Msa0116830-mRNA-1:three_prime_utr;Parent=Msa0116830-mRNA-1
Gene Sequence

>Msa0116830

ATTTATATTGCGAAGGAGTTAGTCAAGGAGAGGACTTATTCAGACGAAGCGACGACTGTCTCTCTTGTTCTTCTTGTTCTTCTTGGAATGGGGACTCCAGAATTTCCAGATCTAGGAAAACACTGCTCTGACTCCGATTGCAAGCTCGTTGATTTCTTGCCTTTCACTTGCGATCGCTGCTACCAGGTGTATTGTTTGGAACACCGAAGTTATATCAAACATCGGTGTACAAAAGCTGACAAGCAAGATGTCACTGTAGTAATATGTCCACTCTGCGCTAAAGGAGTCCGCCTAGTTCCTGAGCAAGATCCAAACATAACATGGGAGAATCATGTTAACACCGACTGCGACCCATCAAATTATGAGAAAGTTACAAAGAAGAAAAAGTGCCCTGCAGCTGGATGCAAAGAGATCTTAGTATTCTCAAACACAATTAAATGCAGGGATTGCACGATAGACCATTGTTTGAAGCATAGGTTTGGTCCTGATCACAAATGTCCAGGACCTAAAAAAGTGGAAACAAATTTCCCTTTTATGAATCTAATGAATAGGAGTAGAAAAAAGGAGTCTAAAACCAACTCAAGTTCAACCTCCTCTTCATCTAAATGGACTACAAGCTTTCTTAATGCTGCTTCTAATATTCGAGCTTCGGCTGAGGCTGGAATGTCAAAGTTGAGTGGTGAAATTAACCAAGCCTGGGGGACATCAAGCAATGGTGGGAGAAAGAGCAACGGCAGTGGTCAAGTGGAGCAATGCCCTCAATGCGGTGCCAAGTTTTCCTCGATCACTACTTTAATCGATCATGTGCAAAAAGTTCATGAAAGAAGTGGCAGCCGATCTGTTGCGAATGTTACCATTGATGCGTGTCCTAAGTGTAGTAAAGGATTCACAGATCCCGTGTCCCTTGTGGAGCATGTTGAGAGGGAACATGGTGGCACTTCTAGAACATAG
Protein sequence

>Msa0116830

IYIAKELVKERTYSDEATTVSLVLLVLLGMGTPEFPDLGKHCSDSDCKLVDFLPFTCDRCYQVYCLEHRSYIKHRCTKADKQDVTVVICPLCAKGVRLVPEQDPNITWENHVNTDCDPSNYEKVTKKKKCPAAGCKEILVFSNTIKCRDCTIDHCLKHRFGPDHKCPGPKKVETNFPFMNLMNRSRKKESKTNSSSTSSSSKWTTSFLNAASNIRASAEAGMSKLSGEINQAWGTSSNGGRKSNGSGQVEQCPQCGAKFSSITTLIDHVQKVHERSGSRSVANVTIDACPKCSKGFTDPVSLVEHVEREHGGTSRT*