AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121120 MtrunA17_Chr1g0179841 98.972 778 8 0 1 778 1 778 0.0 1592
Msa0121120 MtrunA17_Chr7g0265211 69.163 681 202 3 98 778 251 923 0.0 914
Msa0121120 MtrunA17_Chr1g0182481 52.425 433 186 4 347 778 457 870 1.25e-150 463
Msa0121120 MtrunA17_Chr2g0320451 43.454 527 276 5 97 621 228 734 1.47e-133 422
Msa0121120 MtrunA17_Chr2g0320451 55.696 158 60 2 632 781 846 1001 5.15e-48 184
Msa0121120 MtrunA17_Chr4g0028111 43.897 467 218 6 350 778 103 563 1.49e-117 369
Msa0121120 MtrunA17_Chr4g0025251 39.923 521 241 7 325 777 160 676 1.35e-116 369
Msa0121120 MtrunA17_Chr4g0027811 41.595 464 203 7 325 781 154 556 1.00e-107 342
Msa0121120 MtrunA17_Chr1g0205451 28.251 446 241 10 367 789 621 1010 1.62e-39 158
Msa0121120 MtrunA17_Chr3g0105291 27.212 452 255 9 338 773 588 981 1.75e-38 154
Msa0121120 MtrunA17_Chr5g0430361 26.905 420 213 10 378 773 681 1030 1.02e-37 152
Msa0121120 MtrunA17_Chr7g0270101 26.341 410 225 11 386 779 418 766 4.48e-35 143
Msa0121120 MtrunA17_Chr1g0185491 26.077 441 235 11 378 789 840 1218 9.14e-33 137
Msa0121120 MtrunA17_Chr5g0407251 24.362 431 220 10 386 779 37 398 9.01e-31 126
Msa0121120 MtrunA17_Chr5g0407211 24.130 431 221 10 386 779 37 398 3.31e-30 124
Msa0121120 MtrunA17_Chr2g0309061 85.938 64 9 0 53 116 2 65 3.03e-29 113
Msa0121120 MtrunA17_Chr2g0316251 25.908 413 220 14 379 771 791 1137 2.07e-28 123
Msa0121120 MtrunA17_Chr8g0390741 81.250 64 12 0 53 116 2 65 9.95e-28 107
Msa0121120 MtrunA17_Chr3g0134811 25.097 514 276 21 323 779 309 770 8.65e-24 107
Msa0121120 MtrunA17_Chr3g0134821 27.234 235 149 6 553 779 591 811 5.05e-21 99.0
Msa0121120 MtrunA17_Chr2g0320431 30.588 170 116 1 97 264 25 194 1.23e-20 92.8
Msa0121120 MtrunA17_Chr4g0055731 22.286 525 277 13 260 772 35 440 6.98e-20 94.0
Msa0121120 MtrunA17_Chr7g0259981 25.253 297 154 12 523 781 7 273 1.49e-19 90.5
Msa0121120 MtrunA17_Chr4g0030901 32.624 141 89 2 82 222 305 439 4.13e-14 75.5
Msa0121120 MtrunA17_Chr7g0222931 31.496 127 82 2 98 224 407 528 7.88e-13 72.0
Msa0121120 MtrunA17_Chr1g0182221 31.373 153 99 2 60 209 363 512 1.55e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121120 AT2G36720.1 51.149 696 316 6 98 778 263 949 0.0 709
Msa0121120 AT2G36720.2 51.149 696 316 6 98 778 263 949 0.0 709
Msa0121120 AT2G27980.1 43.415 691 343 11 99 778 381 1034 1.28e-179 545
Msa0121120 AT2G37520.1 48.506 435 208 3 347 778 371 792 7.28e-143 442
Msa0121120 AT3G53680.2 49.184 429 203 4 347 773 390 805 5.56e-140 434
Msa0121120 AT3G53680.1 49.184 429 203 4 347 773 388 803 5.86e-140 434
Msa0121120 AT4G14920.2 25.466 483 252 12 356 802 584 994 5.53e-39 157
Msa0121120 AT4G14920.1 25.466 483 252 12 356 802 584 994 5.53e-39 157
Msa0121120 AT4G14920.3 25.466 483 252 12 356 802 584 994 5.99e-39 156
Msa0121120 AT5G58610.4 28.058 417 219 8 377 773 395 750 3.25e-36 147
Msa0121120 AT1G05380.3 28.217 443 231 14 373 789 542 923 3.82e-36 147
Msa0121120 AT1G05380.1 28.217 443 231 14 373 789 542 923 3.82e-36 147
Msa0121120 AT1G05380.2 28.217 443 231 14 373 789 542 923 3.82e-36 147
Msa0121120 AT5G58610.3 28.058 417 219 8 377 773 626 981 8.79e-36 146
Msa0121120 AT5G58610.5 28.058 417 219 8 377 773 617 972 1.08e-35 146
Msa0121120 AT5G58610.7 28.434 415 220 10 377 773 617 972 1.07e-34 143
Msa0121120 AT5G58610.8 28.434 415 220 10 377 773 626 981 1.17e-34 143
Msa0121120 AT5G58610.2 28.434 415 220 10 377 773 626 981 1.17e-34 143
Msa0121120 AT5G36740.5 26.316 418 230 10 378 779 573 928 5.20e-34 141
Msa0121120 AT5G36740.1 26.316 418 230 10 378 779 573 928 5.20e-34 141
Msa0121120 AT5G58610.6 26.923 416 199 8 377 773 617 946 2.21e-31 132
Msa0121120 AT3G14980.6 26.291 426 216 12 380 780 651 1003 4.18e-31 132
Msa0121120 AT3G14980.1 26.291 426 216 12 380 780 651 1003 4.18e-31 132
Msa0121120 AT3G14980.2 26.291 426 216 12 380 780 651 1003 4.18e-31 132
Msa0121120 AT3G14980.3 26.291 426 216 12 380 780 651 1003 4.19e-31 131
Msa0121120 AT3G14980.5 26.291 426 216 12 380 780 606 958 4.26e-31 132
Msa0121120 AT5G58610.10 27.296 392 204 8 377 748 626 956 2.10e-30 129
Msa0121120 AT5G58610.9 27.296 392 204 8 377 748 617 947 2.45e-30 129
Msa0121120 AT5G36670.4 25.369 406 223 11 378 767 573 914 2.69e-30 129
Msa0121120 AT5G36670.5 25.369 406 223 11 378 767 573 914 2.69e-30 129
Msa0121120 AT5G58610.1 27.295 414 200 10 377 773 617 946 2.71e-30 129
Msa0121120 AT5G36670.3 26.214 412 222 15 378 767 420 771 2.98e-29 125
Msa0121120 AT5G36670.2 25.722 381 205 10 378 742 573 891 1.44e-27 120
Msa0121120 AT5G36740.2 25.722 381 205 10 378 742 573 891 1.44e-27 120
Msa0121120 AT5G36740.3 25.722 381 205 10 378 742 573 891 1.44e-27 120
Msa0121120 AT5G58610.11 26.989 352 180 10 377 710 617 909 1.94e-20 97.4
Msa0121120 AT5G63900.1 27.679 224 132 6 553 772 315 512 2.15e-19 93.2
Msa0121120 AT3G14980.4 24.650 357 171 12 380 711 651 934 3.71e-18 90.1
Msa0121120 AT5G36740.4 33.333 129 84 1 654 780 658 786 8.42e-17 85.9
Msa0121120 AT5G36740.4 36.508 126 65 3 378 490 420 543 9.91e-16 82.4
Msa0121120 AT5G36670.1 36.508 126 65 3 378 490 573 696 8.93e-16 82.8
Msa0121120 AT5G36670.1 31.034 116 76 2 654 767 811 924 5.10e-13 73.6
Msa0121120 AT5G59830.3 34.400 125 76 2 98 222 293 411 6.67e-14 75.1
Msa0121120 AT5G59830.1 34.400 125 76 2 98 222 293 411 6.67e-14 75.1
Msa0121120 AT5G59830.2 34.400 125 76 2 98 222 293 411 6.67e-14 75.1

Find 227 sgRNAs with CRISPR-Local

Find 1108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTATATTTGCTTTGAAAA+TGG 0.123170 1_3:+46561975 Msa0121120:CDS
TCCATATGGAAATATAAATT+TGG 0.125727 1_3:+46574160 Msa0121120:CDS
CTTATTCCTTCCATGGTTTA+TGG 0.135452 1_3:+46573205 Msa0121120:CDS
ATGACGTTGGGTTCTGAATT+TGG 0.147369 1_3:-46560393 None:intergenic
CACAAGAATACATTCTATTT+TGG 0.156580 1_3:+46571214 Msa0121120:CDS
CACTGCAAATTTGAAGTAAT+TGG 0.176848 1_3:-46563678 None:intergenic
ATCCTCAACTGACTCTTATT+TGG 0.186712 1_3:-46563711 None:intergenic
TTCGGAGAGAGGGAGATATT+TGG 0.189271 1_3:-46560502 None:intergenic
ATCTTATATCAATCTCATTA+AGG 0.198987 1_3:-46571325 None:intergenic
GCAACGGCGGCCGTCGTTTA+AGG 0.207608 1_3:+46560804 Msa0121120:CDS
AATTTGCAGACTCAGGATTT+TGG 0.214207 1_3:+46573325 Msa0121120:CDS
TGAAACCAGGCCGTTGCTTT+TGG 0.223567 1_3:+46571379 Msa0121120:CDS
ATAACATCCAAAAGAGATTC+AGG 0.231457 1_3:-46571269 None:intergenic
TGAAGAACGACGTCGTTAAA+TGG 0.241984 1_3:+46560770 Msa0121120:CDS
AAAAGCAACGGCCTGGTTTC+AGG 0.258105 1_3:-46571377 None:intergenic
TTGTGTCTTGTAGCAATTAA+TGG 0.261646 1_3:-46573527 None:intergenic
GAAACTCCCTGAATCTCTTT+TGG 0.272070 1_3:+46571262 Msa0121120:CDS
TCGGAGAGAGGGAGATATTT+GGG 0.286455 1_3:-46560501 None:intergenic
GGAGGGAGTGATTGCTGGTG+GGG 0.292430 1_3:+46561728 Msa0121120:CDS
TGCTCTCTTATATATATTAC+AGG 0.292908 1_3:-46561949 None:intergenic
AAAGCAAGAGGATAGATATT+TGG 0.304580 1_3:+46571298 Msa0121120:CDS
TTATTCCTTCCATGGTTTAT+GGG 0.317509 1_3:+46573206 Msa0121120:CDS
GAAGAGTCTTCTTGAGCTAT+TGG 0.318649 1_3:+46561998 Msa0121120:CDS
AGCCACAGAAGCACTCTTCT+TGG 0.326269 1_3:-46563464 None:intergenic
CCCAAATTTATATTTCCATA+TGG 0.331457 1_3:-46574161 None:intergenic
GGCGGCTCCCTCACATTCTA+TGG 0.331512 1_3:+46562031 Msa0121120:CDS
CCATATGGAAATATAAATTT+GGG 0.335557 1_3:+46574161 Msa0121120:CDS
CTGTTTGAGGGATCATAAAA+TGG 0.336907 1_3:+46571057 Msa0121120:CDS
AGTGGAAGAGGCATTGAAAA+TGG 0.346741 1_3:-46560564 None:intergenic
GACTTCAGCAGATCAGGATT+TGG 0.351579 1_3:+46565686 Msa0121120:CDS
GAGGGAGTGATTGCTGGTGG+GGG 0.354632 1_3:+46561729 Msa0121120:CDS
TGTGTCTTGTAGCAATTAAT+GGG 0.364668 1_3:-46573526 None:intergenic
CAAGTAAAATACTTCTCTTC+AGG 0.367477 1_3:-46562086 None:intergenic
TCTTATATCAATCTCATTAA+GGG 0.370075 1_3:-46571324 None:intergenic
AACTTCGTGCCCATGACGTT+GGG 0.373088 1_3:-46560405 None:intergenic
AAGAGTCTTCTTGAGCTATT+GGG 0.376505 1_3:+46561999 Msa0121120:CDS
GGTTCTGACTTCAGCAGATC+AGG 0.381897 1_3:+46565680 Msa0121120:CDS
AAAGAACTGCCAACAGTTGA+TGG 0.385458 1_3:+46574418 Msa0121120:CDS
GGAAATTTGTTTCTCTGTGA+TGG 0.385901 1_3:+46564470 Msa0121120:CDS
AGAGGGAGATATTTGGGATT+GGG 0.386726 1_3:-46560495 None:intergenic
CAATGCACGAGAACAATGTT+TGG 0.387117 1_3:-46574075 None:intergenic
AATATAAATTTGGGTTTAGC+AGG 0.388453 1_3:+46574170 Msa0121120:CDS
TCTTGCATGCATTGTTTGTT+GGG 0.389913 1_3:+46564442 Msa0121120:CDS
AGTATATTTGCTTTGAAAAT+GGG 0.391080 1_3:+46561976 Msa0121120:CDS
AATTGTATTGCAGGAATTGC+CGG 0.392310 1_3:+46571163 Msa0121120:intron
CATAAACCATGGAAGGAATA+AGG 0.392929 1_3:-46573204 None:intergenic
ATAAGATGGAGACTTGTTAA+TGG 0.396793 1_3:+46571341 Msa0121120:CDS
TACAATAATAATTTGTGATC+AGG 0.400521 1_3:+46565715 Msa0121120:CDS
CTTGCATGAGTCGGTTTCCA+TGG 0.402686 1_3:-46560632 None:intergenic
CTTCCAGCTGCCACAGCATC+AGG 0.403214 1_3:-46565468 None:intergenic
CAACAAAGCCAGTCCCCTTC+CGG 0.403997 1_3:-46571182 None:intergenic
GATATTTGGGATTGGGATTG+AGG 0.405115 1_3:-46560488 None:intergenic
AATCCTGATGCTGTGGCAGC+TGG 0.411677 1_3:+46565465 Msa0121120:CDS
TTGAGCTATTGGGAGTATGC+AGG 0.414506 1_3:+46562009 Msa0121120:CDS
AGGGAGTGATTGCTGGTGGG+GGG 0.415143 1_3:+46561730 Msa0121120:CDS
TCAGTAGCTGCGTCAACTAT+AGG 0.418977 1_3:-46573175 None:intergenic
GCATGCATTGTTTGTTGGGA+TGG 0.422817 1_3:+46564446 Msa0121120:CDS
GTGAATTATTGAGAAATTAG+TGG 0.425117 1_3:-46560582 None:intergenic
TTTAAGGTGAAAGTTGATTC+CGG 0.427504 1_3:+46560820 Msa0121120:CDS
GTTTCTCAGCTTCCCTAACT+AGG 0.428895 1_3:-46571244 None:intergenic
CTCTTGGCAATCTGTTCTAT+AGG 0.434308 1_3:-46565507 None:intergenic
AGGAATTGCCGGAAGGGGAC+TGG 0.438872 1_3:+46571174 Msa0121120:intron
AACTTACGTTGAATATTGAC+AGG 0.442245 1_3:-46571406 None:intergenic
TGGAGGGAGTGATTGCTGGT+GGG 0.444030 1_3:+46561727 Msa0121120:CDS
GACAGTTATGCTTCACAAAT+CGG 0.444606 1_3:+46574451 Msa0121120:CDS
GATCAGCCCCGCACAGTTTG+AGG 0.447324 1_3:+46564163 Msa0121120:intron
AGATTGGAGGGAGTGATTGC+TGG 0.449254 1_3:+46561723 Msa0121120:CDS
AGTGTACTGTGCATTATTAA+TGG 0.449624 1_3:+46573351 Msa0121120:CDS
ATCTTGCATGCATTGTTTGT+TGG 0.450152 1_3:+46564441 Msa0121120:CDS
TTGCATGAGTCGGTTTCCAT+GGG 0.450231 1_3:-46560631 None:intergenic
CACTATGCGAATGCATCTCT+TGG 0.450655 1_3:-46565523 None:intergenic
GCATGAACCTCAAACTGTGC+GGG 0.452655 1_3:-46564170 None:intergenic
CATACATCTACACGTCGAAT+GGG 0.452986 1_3:+46564354 Msa0121120:CDS
TACCTTTATGAAATGCCCTT+GGG 0.454662 1_3:-46564496 None:intergenic
GTAGGCTATAAATTCAAGAT+TGG 0.454697 1_3:+46561707 Msa0121120:intron
GTGGAGTTGGCAAAAGAGTC+AGG 0.455898 1_3:+46562389 Msa0121120:CDS
AGCTTATTATGCACGTGGGC+AGG 0.455942 1_3:+46563914 Msa0121120:CDS
AAGAAAATATATACCTGCTC+AGG 0.459137 1_3:-46574199 None:intergenic
ACAGCATCGACAAAGAATTC+CGG 0.463987 1_3:-46564040 None:intergenic
GGGAGGTGAATCTGAAGAAG+AGG 0.464175 1_3:-46560609 None:intergenic
TGGTATCTGCGGGCATGCTA+CGG 0.464986 1_3:+46573477 Msa0121120:CDS
AATATCATGTGGGCTGTTTG+AGG 0.465544 1_3:+46571044 Msa0121120:CDS
ATCTGTCAACACATGTTCCT+TGG 0.465762 1_3:+46565423 Msa0121120:CDS
AGGAACATGTGTTGACAGAT+TGG 0.466413 1_3:-46565420 None:intergenic
GGAGAGAGAGTTTCGGAGAG+AGG 0.466492 1_3:-46560513 None:intergenic
GACAGTCCTATTCGTGGAGT+TGG 0.468517 1_3:+46562376 Msa0121120:CDS
TTACCTTTATGAAATGCCCT+TGG 0.469083 1_3:-46564497 None:intergenic
GGTGAAGATGTTTCTGCTGC+TGG 0.472462 1_3:+46560841 Msa0121120:CDS
CTGAAGAAGCAGAATCCATA+TGG 0.474283 1_3:+46574146 Msa0121120:CDS
TTGTTCATTGCAGTGTGAAA+AGG 0.474367 1_3:+46571021 Msa0121120:intron
TGCCCAAGGGCATTTCATAA+AGG 0.474477 1_3:+46564494 Msa0121120:CDS
TTGCAACCGACATAAACAAC+AGG 0.476405 1_3:-46560967 None:intergenic
CTCAACTGACTCTTATTTGG+TGG 0.478212 1_3:-46563708 None:intergenic
AGGTGAATCTGAAGAAGAGG+GGG 0.479028 1_3:-46560606 None:intergenic
TATTGAGAAATTAGTGGAAG+AGG 0.479430 1_3:-46560576 None:intergenic
TTTGGAGAACCTCCTAGTTA+GGG 0.479610 1_3:+46571232 Msa0121120:CDS
ATGAATCTCAAACGTGGAGG+GGG 0.482350 1_3:-46561925 None:intergenic
TGATGCTGTGGCAGCTGGAA+GGG 0.483013 1_3:+46565470 Msa0121120:CDS
AAGAGTAAGATTCAGATAAA+CGG 0.483069 1_3:+46560652 Msa0121120:CDS
CATTGTTCTCGTGCATTGAA+AGG 0.483352 1_3:+46574080 Msa0121120:CDS
GTTTGAGGTTCATGCAGGGT+GGG 0.485354 1_3:+46564178 Msa0121120:CDS
GATTCTGCTTCTTCAGCAGC+TGG 0.489139 1_3:-46574139 None:intergenic
TCATAAAATGGCATATTTGA+AGG 0.489326 1_3:+46571069 Msa0121120:CDS
GTGGCAGCTGGAAGGGTTGA+AGG 0.490657 1_3:+46565477 Msa0121120:CDS
TTAATGAGATTGATATAAGA+TGG 0.490803 1_3:+46571327 Msa0121120:CDS
GAGAGGGAGATATTTGGGAT+TGG 0.491845 1_3:-46560496 None:intergenic
AAAGACTTTGAAGCGGAGAC+TGG 0.492347 1_3:+46565546 Msa0121120:CDS
GAGAGAGAGTTTCGGAGAGA+GGG 0.494326 1_3:-46560512 None:intergenic
GAGGTGAATCTGAAGAAGAG+GGG 0.494351 1_3:-46560607 None:intergenic
ACGTGACCTTATTCCTTCCA+TGG 0.495736 1_3:+46573198 Msa0121120:CDS
GCACAGTTTGAGGTTCATGC+AGG 0.496329 1_3:+46564173 Msa0121120:CDS
TCTGAAGACAGTCCTATTCG+TGG 0.498113 1_3:+46562370 Msa0121120:CDS
TAAGCTACTTCAGCTCCATC+AGG 0.502423 1_3:-46563897 None:intergenic
ATATCATGTGGGCTGTTTGA+GGG 0.505130 1_3:+46571045 Msa0121120:CDS
CACGTTTCAGAAATACTAGA+TGG 0.505508 1_3:-46563255 None:intergenic
TGCTTGCTTCCACGCAAGAA+TGG 0.505854 1_3:-46562345 None:intergenic
TGCTCATGCTGTCTGTGCAA+TGG 0.513192 1_3:+46561759 Msa0121120:CDS
AATTGACAGAAACGGCTTGA+GGG 0.514481 1_3:+46564003 Msa0121120:intron
GGCTATAAATTCAAGATTGG+AGG 0.516560 1_3:+46561710 Msa0121120:intron
AATCTTACTCTTGCATGAGT+CGG 0.516855 1_3:-46560641 None:intergenic
GGTGAATCTGAAGAAGAGGG+GGG 0.516877 1_3:-46560605 None:intergenic
ATTGGGATTGAGGAAGAAGA+GGG 0.517925 1_3:-46560478 None:intergenic
GCATACATCTACACGTCGAA+TGG 0.518011 1_3:+46564353 Msa0121120:CDS
GGCCTCCAAAAGCAACGGCC+TGG 0.519244 1_3:-46571384 None:intergenic
TGTTATTAAGGTCATCAAAA+CGG 0.519638 1_3:+46563422 Msa0121120:intron
TCTTACCCATAAACCATGGA+AGG 0.523021 1_3:-46573211 None:intergenic
AACAGTTGATGGCATTCAAA+GGG 0.524220 1_3:+46574429 Msa0121120:CDS
TAACATCCAAAAGAGATTCA+GGG 0.524976 1_3:-46571268 None:intergenic
GGTGTTCCTGTTGTTTATGT+CGG 0.525517 1_3:+46560961 Msa0121120:CDS
GACTTTGAAGCGGAGACTGG+TGG 0.526328 1_3:+46565549 Msa0121120:CDS
CAACAGTTGATGGCATTCAA+AGG 0.527248 1_3:+46574428 Msa0121120:CDS
GTTTCAACTGTGAAAAGAGT+GGG 0.527321 1_3:+46562313 Msa0121120:CDS
GGAGGTGAATCTGAAGAAGA+GGG 0.528264 1_3:-46560608 None:intergenic
TGCATTGTTTGTTGGGATGG+TGG 0.528430 1_3:+46564449 Msa0121120:CDS
GTTCTCGTGCATTGAAAGGC+TGG 0.529132 1_3:+46574084 Msa0121120:CDS
CATGAATCTCAAACGTGGAG+GGG 0.529203 1_3:-46561926 None:intergenic
GCATGAATCTCAAACGTGGA+GGG 0.530605 1_3:-46561927 None:intergenic
TAACTTCGTGCCCATGACGT+TGG 0.531447 1_3:-46560406 None:intergenic
ACAAATCGGTGCCTCGATGT+CGG 0.531461 1_3:+46574465 Msa0121120:CDS
CAGACGGAATTTGCAGACTC+AGG 0.532461 1_3:+46573318 Msa0121120:intron
AAATTCAGAACCCAACGTCA+TGG 0.538975 1_3:+46560395 Msa0121120:five_prime_UTR
GAAGAAAAGTTTGTGCAGCA+TGG 0.539108 1_3:+46563498 Msa0121120:CDS
CTGGTGGATGTGCTTTATGC+AGG 0.540901 1_3:+46565565 Msa0121120:CDS
CTGATGCTGTGGCAGCTGGA+AGG 0.543320 1_3:+46565469 Msa0121120:CDS
GACGAAGATGGATTGCCTGA+TGG 0.547054 1_3:+46563882 Msa0121120:CDS
GATGGACTAGAAAACAGATA+TGG 0.547388 1_3:-46563237 None:intergenic
GGCTCTCAATCCTGATGCTG+TGG 0.547809 1_3:+46565458 Msa0121120:CDS
CTTTGAATGCCATCAACTGT+TGG 0.549216 1_3:-46574427 None:intergenic
AGTTCATCTGTGGTATCTGC+GGG 0.549370 1_3:+46573467 Msa0121120:intron
AGAGGAATAATGCCAACTCA+TGG 0.556239 1_3:-46564385 None:intergenic
CAACACATGTTCCTTGGAGA+AGG 0.557316 1_3:+46565429 Msa0121120:CDS
TCGTTAAATGGACTTCGAAA+CGG 0.558175 1_3:+46560782 Msa0121120:CDS
GCTTATATGCCATTCTTGCG+TGG 0.560941 1_3:+46562336 Msa0121120:CDS
CAAGTACTCCACGACGTGGT+CGG 0.562466 1_3:+46565391 Msa0121120:CDS
AGCAGCAGAAACATCTTCAC+CGG 0.562882 1_3:-46560839 None:intergenic
ATTGCAGGAATTGCCGGAAG+GGG 0.562910 1_3:+46571169 Msa0121120:intron
CCTCAGGCCTCACCTTTCCA+CGG 0.564167 1_3:-46573553 None:intergenic
AGTTTGAGGTTCATGCAGGG+TGG 0.564357 1_3:+46564177 Msa0121120:CDS
TAGCAGGACGAAACCTGAGC+AGG 0.567038 1_3:+46574186 Msa0121120:CDS
TGGGGTGTCTCTCCATGAGT+TGG 0.568371 1_3:+46564373 Msa0121120:CDS
ATGCAGGGTGGGCTTCTCGC+AGG 0.570430 1_3:+46564189 Msa0121120:CDS
TGAGCTATTGGGAGTATGCA+GGG 0.570829 1_3:+46562010 Msa0121120:CDS
CTTCAGCAGCTGGTAACACA+AGG 0.572407 1_3:-46574129 None:intergenic
TTCTCTGTGATGGATGCCCA+AGG 0.572746 1_3:+46564480 Msa0121120:CDS
AAGTTCATCTGTGGTATCTG+CGG 0.573259 1_3:+46573466 Msa0121120:intron
AATTCAGAACCCAACGTCAT+GGG 0.575586 1_3:+46560396 Msa0121120:five_prime_UTR
AAGGTTCTTCACATTCAAGA+AGG 0.575726 1_3:-46574110 None:intergenic
CTTATATCAATCTCATTAAG+GGG 0.577053 1_3:-46571323 None:intergenic
TAATTGACAGAAACGGCTTG+AGG 0.578556 1_3:+46564002 Msa0121120:intron
TTTACTTGCAGGAGCTGCAG+AGG 0.579276 1_3:+46562101 Msa0121120:CDS
GGACTTCGAAACGGCAACGG+CGG 0.585154 1_3:+46560791 Msa0121120:CDS
TTGGAGGGAGTGATTGCTGG+TGG 0.585530 1_3:+46561726 Msa0121120:CDS
AAGTTGCTTCTCCTGAAACC+AGG 0.585700 1_3:+46571366 Msa0121120:CDS
CACAGTTTGAGGTTCATGCA+GGG 0.587311 1_3:+46564174 Msa0121120:CDS
GCTATAAATTCAAGATTGGA+GGG 0.587593 1_3:+46561711 Msa0121120:CDS
TAAGATTGAGAAGAACGAAA+CGG 0.588731 1_3:+46560885 Msa0121120:CDS
TGCATGAACCTCAAACTGTG+CGG 0.593309 1_3:-46564171 None:intergenic
TCAACTTTCACCTTAAACGA+CGG 0.594907 1_3:-46560814 None:intergenic
TATTGCAGGAATTGCCGGAA+GGG 0.596741 1_3:+46571168 Msa0121120:intron
TCTCAGCTTCCCTAACTAGG+AGG 0.599220 1_3:-46571241 None:intergenic
TGAGAAGTGGTTGACTATGA+AGG 0.599863 1_3:+46560912 Msa0121120:CDS
TTCCAAGAAGAGTGCTTCTG+TGG 0.601434 1_3:+46563462 Msa0121120:CDS
ACGAAACGGTTGGTGAGAAG+TGG 0.603921 1_3:+46560899 Msa0121120:CDS
GCTGAAAATCGATGAAAATG+TGG 0.604887 1_3:+46560741 Msa0121120:CDS
AATGGACTTCGAAACGGCAA+CGG 0.606854 1_3:+46560788 Msa0121120:CDS
GATTGGGATTGAGGAAGAAG+AGG 0.609443 1_3:-46560479 None:intergenic
GTAAAATACTTCTCTTCAGG+CGG 0.611253 1_3:-46562083 None:intergenic
TGAATCTCAAACGTGGAGGG+GGG 0.613565 1_3:-46561924 None:intergenic
GTATTGCAGGAATTGCCGGA+AGG 0.614653 1_3:+46571167 Msa0121120:intron
TGTTTCAACTGTGAAAAGAG+TGG 0.615028 1_3:+46562312 Msa0121120:CDS
GGTGGCTTCCATAGAATGTG+AGG 0.615600 1_3:-46562039 None:intergenic
GACAGGGCCTCCAAAAGCAA+CGG 0.618009 1_3:-46571389 None:intergenic
ATTGAGAAGAACGAAACGGT+TGG 0.623211 1_3:+46560889 Msa0121120:CDS
TGCATGAGTCGGTTTCCATG+GGG 0.625597 1_3:-46560630 None:intergenic
CTCGTGCATTGAAAGGCTGG+TGG 0.635327 1_3:+46574087 Msa0121120:CDS
GAAGTAGCTTATTATGCACG+TGG 0.636060 1_3:+46563909 Msa0121120:CDS
GACTCACTGAGTCAAACTCG+TGG 0.637527 1_3:+46560453 Msa0121120:five_prime_UTR
CTAGAAAACAGATATGGTCG+AGG 0.637794 1_3:-46563231 None:intergenic
CATAGTGAAAGACTTTGAAG+CGG 0.638804 1_3:+46565539 Msa0121120:CDS
GCATGAGTCGGTTTCCATGG+GGG 0.639950 1_3:-46560629 None:intergenic
CATGAACCTCAAACTGTGCG+GGG 0.641179 1_3:-46564169 None:intergenic
CTGGCCTTGAAGTTCATCTG+TGG 0.641312 1_3:+46573457 Msa0121120:intron
GTTCCTTGGAGAAGGATCTG+TGG 0.642717 1_3:+46565437 Msa0121120:CDS
AATCGATGAAAATGTGGATG+CGG 0.644206 1_3:+46560747 Msa0121120:CDS
TCACAAATTATTATTGTACG+TGG 0.645074 1_3:-46565710 None:intergenic
GGCATGAATCTCAAACGTGG+AGG 0.645279 1_3:-46561928 None:intergenic
TTTCAACTGTGAAAAGAGTG+GGG 0.648043 1_3:+46562314 Msa0121120:CDS
AAGACACAAGAACCGTGGAA+AGG 0.652304 1_3:+46573541 Msa0121120:CDS
TCGATAACGAAGAACCGAAG+AGG 0.663133 1_3:+46560719 Msa0121120:CDS
GTGAATCTGAAGAAGAGGGG+GGG 0.664463 1_3:-46560604 None:intergenic
TCTCTGTGATGGATGCCCAA+GGG 0.664544 1_3:+46564481 Msa0121120:CDS
GAGCCACAGATCCTTCTCCA+AGG 0.665899 1_3:-46565440 None:intergenic
CACCAAATAAGAGTCAGTTG+AGG 0.666522 1_3:+46563709 Msa0121120:CDS
GTGGCTTCCATAGAATGTGA+GGG 0.669340 1_3:-46562038 None:intergenic
TTGGGATTGAGGAAGAAGAG+GGG 0.681917 1_3:-46560477 None:intergenic
ATACATCTACACGTCGAATG+GGG 0.686445 1_3:+46564355 Msa0121120:CDS
GGACAGTACCGACCACGTCG+TGG 0.691672 1_3:-46565399 None:intergenic
GTGTGAAAAGGAATATCATG+TGG 0.694053 1_3:+46571033 Msa0121120:intron
ACTTACGTTGAATATTGACA+GGG 0.701623 1_3:-46571405 None:intergenic
AAGTAGCTTATTATGCACGT+GGG 0.703781 1_3:+46563910 Msa0121120:CDS
TTGTCGATGCTGTAACACTG+AGG 0.721112 1_3:+46564050 Msa0121120:CDS
TGTGAAAAGGAATATCATGT+GGG 0.723346 1_3:+46571034 Msa0121120:CDS
GCTACAAGACACAAGAACCG+TGG 0.728402 1_3:+46573536 Msa0121120:CDS
GTATCAAGTACTCCACGACG+TGG 0.746666 1_3:+46565387 Msa0121120:CDS
CTATGAATGATCCGACATCG+AGG 0.764887 1_3:-46574476 None:intergenic
ACAGGCATGAATCTCAAACG+TGG 0.765554 1_3:-46561931 None:intergenic
GCTATTGGGAGTATGCAGGG+CGG 0.800949 1_3:+46562013 Msa0121120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAATTATATCATTTTAT+CGG + chr1_3:46561190-46561209 Msa0121120:intron 10.0%
!! TTATAATTATCTAATCAAAT+AGG - chr1_3:46561490-46561509 None:intergenic 10.0%
!!! TTCCATTTAAAATATATAAA+GGG - chr1_3:46565643-46565662 None:intergenic 10.0%
!!! TTTCCATTTAAAATATATAA+AGG - chr1_3:46565644-46565663 None:intergenic 10.0%
!!! TATATTTTAAATGGAAAATT+TGG + chr1_3:46565647-46565666 Msa0121120:intron 10.0%
!!! GATCTATTTTTTTTTTTTTT+TGG + chr1_3:46566422-46566441 Msa0121120:intron 10.0%
!! TAACTTAAGAAATTATAAAT+AGG - chr1_3:46568998-46569017 None:intergenic 10.0%
!!! AAATTTTAGGAAATAAAAAT+AGG + chr1_3:46570862-46570881 Msa0121120:intron 10.0%
!! AAAGTAAATAAATACAATTT+AGG + chr1_3:46571634-46571653 Msa0121120:intron 10.0%
!!! ATATTTTGTAACTTAATTTT+TGG + chr1_3:46573869-46573888 Msa0121120:intron 10.0%
!!! TATTTTGTAACTTAATTTTT+GGG + chr1_3:46573870-46573889 Msa0121120:intron 10.0%
!! TATATTAATTTCCTTAACAT+GGG + chr1_3:46561388-46561407 Msa0121120:intron 15.0%
!!! TAAACAAAGAAAATTTTGAA+TGG - chr1_3:46562063-46562082 None:intergenic 15.0%
!! AAACTAAGAATTAAATTTCA+CGG + chr1_3:46562207-46562226 Msa0121120:intron 15.0%
!!! CTTATATTTTTTTACAGATA+CGG + chr1_3:46562846-46562865 Msa0121120:intron 15.0%
!! TGAATAATATACAAGATAAA+TGG - chr1_3:46563342-46563361 None:intergenic 15.0%
!!! AAATCATGAAATAAAGTTTT+AGG - chr1_3:46565049-46565068 None:intergenic 15.0%
!! TATTTCATGATTTACTTAAT+TGG + chr1_3:46565056-46565075 Msa0121120:intron 15.0%
!!! TCCATTTAAAATATATAAAG+GGG - chr1_3:46565642-46565661 None:intergenic 15.0%
!! AATAACTGTACATATTAATA+AGG - chr1_3:46566101-46566120 None:intergenic 15.0%
!! AAAAAAAAAAAAATAGATCC+TGG - chr1_3:46566421-46566440 None:intergenic 15.0%
!!! AAAACTTGATAATCTATATA+TGG + chr1_3:46566954-46566973 Msa0121120:intron 15.0%
!! TTAATATCTAATTGATACAA+TGG - chr1_3:46569388-46569407 None:intergenic 15.0%
!! AATAACTGTACATATTAATA+AGG - chr1_3:46566101-46566120 None:intergenic 15.0%
!! TTTATGTTAGTTATTGTTAA+AGG - chr1_3:46570845-46570864 None:intergenic 15.0%
!!! CAATAACTAACATAAATTTT+AGG + chr1_3:46570849-46570868 Msa0121120:intron 15.0%
!!! AAATACCAAAATTTTAAGAA+GGG - chr1_3:46573647-46573666 None:intergenic 15.0%
!!! AAAATACCAAAATTTTAAGA+AGG - chr1_3:46573648-46573667 None:intergenic 15.0%
!! TTAAGTTACAAAATATTAAG+TGG - chr1_3:46573865-46573884 None:intergenic 15.0%
!!! ATTATTTATTACCTTTTCTT+CGG + chr1_3:46574317-46574336 Msa0121120:intron 15.0%
!! TCGATTCATTGTTTATATTA+TGG + chr1_3:46561281-46561300 Msa0121120:intron 20.0%
!! TCATTGTTTATATTATGGAA+AGG + chr1_3:46561286-46561305 Msa0121120:intron 20.0%
!! CTATATTAATTTCCTTAACA+TGG + chr1_3:46561387-46561406 Msa0121120:intron 20.0%
!!! AGTATATTTGCTTTGAAAAT+GGG + chr1_3:46561976-46561995 Msa0121120:CDS 20.0%
!! TTTATCATTATTATTCCCAT+AGG + chr1_3:46562280-46562299 Msa0121120:intron 20.0%
!! TTATCATTATTATTCCCATA+GGG + chr1_3:46562281-46562300 Msa0121120:intron 20.0%
!!! TGTCATTTTACAATTAGAAT+GGG - chr1_3:46562965-46562984 None:intergenic 20.0%
!! ATGTTATCCTAACTATATAA+GGG - chr1_3:46563558-46563577 None:intergenic 20.0%
!! TATGTTATCCTAACTATATA+AGG - chr1_3:46563559-46563578 None:intergenic 20.0%
!!! AAATTAATTTTTGACGAAGA+TGG + chr1_3:46563870-46563889 Msa0121120:CDS 20.0%
!!! TATTACTTTTGTATGTGTAT+AGG + chr1_3:46564083-46564102 Msa0121120:intron 20.0%
!! TTGTCTAATAAATGATTGAT+TGG + chr1_3:46564875-46564894 Msa0121120:intron 20.0%
!! TAAACTTTCTATAATAGTGT+TGG + chr1_3:46564950-46564969 Msa0121120:intron 20.0%
!! TCATTATTTCCATATGAAAT+TGG - chr1_3:46565007-46565026 None:intergenic 20.0%
!! AGAAGATGACTAAAAAAAAA+GGG - chr1_3:46565319-46565338 None:intergenic 20.0%
!! TAGAAGATGACTAAAAAAAA+AGG - chr1_3:46565320-46565339 None:intergenic 20.0%
!! TATATAAAGGGGAAAAATTA+TGG - chr1_3:46565631-46565650 None:intergenic 20.0%
!!! TCCCCTTTATATATTTTAAA+TGG + chr1_3:46565638-46565657 Msa0121120:intron 20.0%
!!! TACAATAATAATTTGTGATC+AGG + chr1_3:46565715-46565734 Msa0121120:CDS 20.0%
!! ACTTAATTATAAATGTTCCT+GGG - chr1_3:46565785-46565804 None:intergenic 20.0%
!! TAATTAAGTGCTTGTTTATT+TGG + chr1_3:46565796-46565815 Msa0121120:intron 20.0%
!! ATGGAAAAAATTATTTAGCT+TGG + chr1_3:46566560-46566579 Msa0121120:intron 20.0%
!!! GTTGTTAAATTTTCTAAAGA+AGG - chr1_3:46567051-46567070 None:intergenic 20.0%
!!! ATAAAATGAGGATTTTTGTT+AGG - chr1_3:46567516-46567535 None:intergenic 20.0%
!! TCTAGAAAATTCATCAATAA+AGG - chr1_3:46568057-46568076 None:intergenic 20.0%
!! AAGAAATTATAAATAGGATG+AGG - chr1_3:46568992-46569011 None:intergenic 20.0%
!!! ATTTTTAGGAATAGAAATAG+AGG - chr1_3:46569065-46569084 None:intergenic 20.0%
!! ATTAAAAATGCATTTCTACA+TGG + chr1_3:46569403-46569422 Msa0121120:intron 20.0%
!! AAATACATTAAAAAACAACC+AGG + chr1_3:46570075-46570094 Msa0121120:intron 20.0%
!! TCTTATATCAATCTCATTAA+GGG - chr1_3:46571327-46571346 None:intergenic 20.0%
!! ATCTTATATCAATCTCATTA+AGG - chr1_3:46571328-46571347 None:intergenic 20.0%
!! TTAATGAGATTGATATAAGA+TGG + chr1_3:46571327-46571346 Msa0121120:CDS 20.0%
!! GAAAATGAAGAAGAAATATA+AGG - chr1_3:46571440-46571459 None:intergenic 20.0%
!!! TATTCTAACTAATGGATTAA+TGG + chr1_3:46571787-46571806 Msa0121120:intron 20.0%
!!! ATTCTAACTAATGGATTAAT+GGG + chr1_3:46571788-46571807 Msa0121120:intron 20.0%
!! AGCTAAAAAAGACATTATAT+GGG - chr1_3:46572917-46572936 None:intergenic 20.0%
!! AAGCTAAAAAAGACATTATA+TGG - chr1_3:46572918-46572937 None:intergenic 20.0%
!!! ATGTTCACATTTTATTTAAC+TGG + chr1_3:46573438-46573457 Msa0121120:intron 20.0%
!!! AATTTTGGTATTTTTTTCGA+TGG + chr1_3:46573654-46573673 Msa0121120:intron 20.0%
!!! ATTTTGGTATTTTTTTCGAT+GGG + chr1_3:46573655-46573674 Msa0121120:intron 20.0%
!! TATTTAATACTACACAAAGT+GGG + chr1_3:46573776-46573795 Msa0121120:intron 20.0%
!!! ATCATAATTTTATTTGCTCT+TGG + chr1_3:46573904-46573923 Msa0121120:intron 20.0%
!! TCCATATGGAAATATAAATT+TGG + chr1_3:46574160-46574179 Msa0121120:CDS 20.0%
!! CCATATGGAAATATAAATTT+GGG + chr1_3:46574161-46574180 Msa0121120:CDS 20.0%
!!! CATTTTGTTTTACATTTCTA+TGG + chr1_3:46574275-46574294 Msa0121120:intron 20.0%
! GTGAATTATTGAGAAATTAG+TGG - chr1_3:46560585-46560604 None:intergenic 25.0%
! AAGAGTAAGATTCAGATAAA+CGG + chr1_3:46560652-46560671 Msa0121120:CDS 25.0%
!!! ACCATTTTAAAAACAGTATC+AGG - chr1_3:46561322-46561341 None:intergenic 25.0%
!!! CACTAAGTTTAATTTTGATG+CGG + chr1_3:46561677-46561696 Msa0121120:intron 25.0%
!!! TCATTGTCATTTTTGTCTTT+GGG + chr1_3:46561797-46561816 Msa0121120:intron 25.0%
! TGCTCTCTTATATATATTAC+AGG - chr1_3:46561952-46561971 None:intergenic 25.0%
!!! CAGTATATTTGCTTTGAAAA+TGG + chr1_3:46561975-46561994 Msa0121120:CDS 25.0%
!! ACAAAGAAAATTTTGAATGG+TGG - chr1_3:46562060-46562079 None:intergenic 25.0%
! ACTCCAAATAAGAAAAAGTA+AGG - chr1_3:46562133-46562152 None:intergenic 25.0%
! TATCATTATTATTCCCATAG+GGG + chr1_3:46562282-46562301 Msa0121120:intron 25.0%
! TATTTATTTATTCAGCCGTT+GGG + chr1_3:46562412-46562431 Msa0121120:intron 25.0%
!! TACTCAATGTTATTAGGTTT+TGG + chr1_3:46562526-46562545 Msa0121120:intron 25.0%
!!! TGTTATTAGGTTTTGGATAA+TGG + chr1_3:46562533-46562552 Msa0121120:intron 25.0%
!!! TTTAGTGTTGATAATGTTTG+TGG + chr1_3:46562671-46562690 Msa0121120:intron 25.0%
! ATGCAAAAAGTAACTGTTAT+TGG + chr1_3:46562916-46562935 Msa0121120:intron 25.0%
! TGCAAAAAGTAACTGTTATT+GGG + chr1_3:46562917-46562936 Msa0121120:intron 25.0%
!!! CTGTCATTTTACAATTAGAA+TGG - chr1_3:46562966-46562985 None:intergenic 25.0%
! ATAAAAGAAAGTCAGAAGAA+GGG - chr1_3:46563181-46563200 None:intergenic 25.0%
! TGACTGTATTACAATATTTC+AGG + chr1_3:46563205-46563224 Msa0121120:intron 25.0%
!!! TGCATAATCAATTTTTCAAG+AGG + chr1_3:46563377-46563396 Msa0121120:intron 25.0%
! TGTTCTCAACTATGTTATTA+AGG + chr1_3:46563410-46563429 Msa0121120:intron 25.0%
! TGTTATTAAGGTCATCAAAA+CGG + chr1_3:46563422-46563441 Msa0121120:intron 25.0%
! TGTTATCCTAACTATATAAG+GGG - chr1_3:46563557-46563576 None:intergenic 25.0%
! AGGACAAATAAATATGGAAA+AGG - chr1_3:46564580-46564599 None:intergenic 25.0%
! TAACAGAGGACAAATAAATA+TGG - chr1_3:46564586-46564605 None:intergenic 25.0%
! ACATAACTTACAAATAACAG+AGG - chr1_3:46564600-46564619 None:intergenic 25.0%
! TTTCCTTATTAGTAGTTATG+TGG + chr1_3:46564805-46564824 Msa0121120:intron 25.0%
!!! TTGATTGGTTATTTTTCCTA+TGG + chr1_3:46564890-46564909 Msa0121120:intron 25.0%
! TATTAAGCTCCAATTTCATA+TGG + chr1_3:46564995-46565014 Msa0121120:intron 25.0%
! TCACAAATTATTATTGTACG+TGG - chr1_3:46565713-46565732 None:intergenic 25.0%
! CTTAATTATAAATGTTCCTG+GGG - chr1_3:46565784-46565803 None:intergenic 25.0%
! CACTTAATTATAAATGTTCC+TGG - chr1_3:46565786-46565805 None:intergenic 25.0%
! CTACCTAAAAAAAAATGAAG+AGG + chr1_3:46565885-46565904 Msa0121120:intron 25.0%
!!! TCTCCTCTTCATTTTTTTTT+AGG - chr1_3:46565891-46565910 None:intergenic 25.0%
!!! ATTGTCATTTTCATTGTTTC+TGG + chr1_3:46565995-46566014 Msa0121120:intron 25.0%
! AACAGTTATGATTGTTAACA+AGG - chr1_3:46566060-46566079 None:intergenic 25.0%
! TTGTTAACAATCATAACTGT+TGG + chr1_3:46566059-46566078 Msa0121120:intron 25.0%
! TAAATCACATTCATGTACTT+AGG + chr1_3:46566159-46566178 Msa0121120:intron 25.0%
! CTAGAGAGTAAATACAATAT+GGG - chr1_3:46566216-46566235 None:intergenic 25.0%
! TCTAGAGAGTAAATACAATA+TGG - chr1_3:46566217-46566236 None:intergenic 25.0%
! TGTTAAAGGACTAATAGTTA+TGG - chr1_3:46566285-46566304 None:intergenic 25.0%
! TAACTATTAGTCCTTTAACA+TGG + chr1_3:46566285-46566304 Msa0121120:intron 25.0%
!!! AATTTTTCTGAAGTGATTGT+TGG - chr1_3:46566538-46566557 None:intergenic 25.0%
! ATCACTTCAGAAAAATTGAA+TGG + chr1_3:46566541-46566560 Msa0121120:intron 25.0%
! AGAGGAGTTAAAATTATCTT+TGG + chr1_3:46566903-46566922 Msa0121120:intron 25.0%
!! CTTCATTTCTTCAATTTTGT+CGG - chr1_3:46566932-46566951 None:intergenic 25.0%
! TGATAATCTATATATGGTGT+TGG + chr1_3:46566960-46566979 Msa0121120:intron 25.0%
!! ACTGAATTTACTTCTGTTTT+AGG - chr1_3:46567096-46567115 None:intergenic 25.0%
! ATGTTCTTATTGCAAAAGAA+TGG + chr1_3:46567212-46567231 Msa0121120:intron 25.0%
! TGTTCTTATTGCAAAAGAAT+GGG + chr1_3:46567213-46567232 Msa0121120:intron 25.0%
!!! GACACTTGTTATTCTATTTA+TGG + chr1_3:46567246-46567265 Msa0121120:intron 25.0%
! TATTCTATTTATGGATTTCC+TGG + chr1_3:46567255-46567274 Msa0121120:intron 25.0%
! TATAAACAAGACAGAACTTA+AGG - chr1_3:46567607-46567626 None:intergenic 25.0%
!!! ATGAATAAGTTTTGGTGAAT+TGG - chr1_3:46567814-46567833 None:intergenic 25.0%
!!! CCATTATTTTTAGTTTGGAT+AGG - chr1_3:46567857-46567876 None:intergenic 25.0%
! CCTATCCAAACTAAAAATAA+TGG + chr1_3:46567854-46567873 Msa0121120:intron 25.0%
!!! TGGAACCATTATTTTTAGTT+TGG - chr1_3:46567862-46567881 None:intergenic 25.0%
! AAACTAAAAATAATGGTTCC+AGG + chr1_3:46567861-46567880 Msa0121120:intron 25.0%
! TCTGAATGAATAACTGAAAA+AGG - chr1_3:46567984-46568003 None:intergenic 25.0%
! AGTTATTCATTCAGATGTAT+GGG + chr1_3:46567989-46568008 Msa0121120:intron 25.0%
!! ATGAATTTTCTAGATGTACT+TGG + chr1_3:46568063-46568082 Msa0121120:intron 25.0%
!! TGAATTTTCTAGATGTACTT+GGG + chr1_3:46568064-46568083 Msa0121120:intron 25.0%
! ATTAACAAAAGAAGTGAAGA+TGG - chr1_3:46568123-46568142 None:intergenic 25.0%
! ACGAATTGTCTTATCAAATT+GGG - chr1_3:46568156-46568175 None:intergenic 25.0%
! TACGAATTGTCTTATCAAAT+TGG - chr1_3:46568157-46568176 None:intergenic 25.0%
!! TTGTTATTGATAGAAGAAGA+GGG - chr1_3:46568416-46568435 None:intergenic 25.0%
!!! TTTGTTATTGATAGAAGAAG+AGG - chr1_3:46568417-46568436 None:intergenic 25.0%
! ATATGAAACAAAGGTTCTTT+AGG - chr1_3:46568461-46568480 None:intergenic 25.0%
!!! ACCATATTTTTTACCATCAT+CGG + chr1_3:46568667-46568686 Msa0121120:intron 25.0%
! GCTATAAAAGAATGATAAGA+AGG - chr1_3:46569034-46569053 None:intergenic 25.0%
! TATTCCTAAAAATGTTTGTG+AGG + chr1_3:46569072-46569091 Msa0121120:intron 25.0%
! TTTAGAAGAGGAGATTTATA+TGG + chr1_3:46569429-46569448 Msa0121120:intron 25.0%
! AGAAAAAATTTCTCAACTGA+AGG + chr1_3:46569693-46569712 Msa0121120:intron 25.0%
!!! AATTTTTGATTTGGATCCAT+AGG - chr1_3:46569883-46569902 None:intergenic 25.0%
!!! TTGGGTAACAATTTTTGATT+TGG - chr1_3:46569892-46569911 None:intergenic 25.0%
! CTTCTTCTTGAATTGAAATT+TGG + chr1_3:46570330-46570349 Msa0121120:intron 25.0%
! TAAATCACATTCATGTACTT+AGG + chr1_3:46566159-46566178 Msa0121120:intron 25.0%
! CTAGAGAGTAAATACAATAT+GGG - chr1_3:46566216-46566235 None:intergenic 25.0%
! TCTAGAGAGTAAATACAATA+TGG - chr1_3:46566217-46566236 None:intergenic 25.0%
! TGTTAAAGGACTAATAGTTA+TGG - chr1_3:46566285-46566304 None:intergenic 25.0%
! TCTTCAAATAAGGAAACTTT+GGG - chr1_3:46570912-46570931 None:intergenic 25.0%
! TTCTTCAAATAAGGAAACTT+TGG - chr1_3:46570913-46570932 None:intergenic 25.0%
!! AAAGTTTCCTTATTTGAAGA+AGG + chr1_3:46570912-46570931 Msa0121120:intron 25.0%
!! AAGTTTCCTTATTTGAAGAA+GGG + chr1_3:46570913-46570932 Msa0121120:intron 25.0%
! ATTATACCCTTCTTCAAATA+AGG - chr1_3:46570922-46570941 None:intergenic 25.0%
! TCATAAAATGGCATATTTGA+AGG + chr1_3:46571069-46571088 Msa0121120:CDS 25.0%
! CATATATTGACACATACATT+TGG + chr1_3:46571110-46571129 Msa0121120:intron 25.0%
!! CACAAGAATACATTCTATTT+TGG + chr1_3:46571214-46571233 Msa0121120:CDS 25.0%
! TGTTATAAAGAAAAAGCAAG+AGG + chr1_3:46571286-46571305 Msa0121120:CDS 25.0%
! CTTATATCAATCTCATTAAG+GGG - chr1_3:46571326-46571345 None:intergenic 25.0%
! TCATGATCATAACTTTATGT+AGG + chr1_3:46571458-46571477 Msa0121120:intron 25.0%
! CATGATCATAACTTTATGTA+GGG + chr1_3:46571459-46571478 Msa0121120:intron 25.0%
!!! CTTGGTATTTTTGTTATTGT+TGG + chr1_3:46571533-46571552 Msa0121120:intron 25.0%
! AAAATAAATGCATGTTCACA+GGG + chr1_3:46571679-46571698 Msa0121120:intron 25.0%
! ACAAGTACTACTCTTTATAT+AGG + chr1_3:46571763-46571782 Msa0121120:intron 25.0%
! ATATAGGCTATTCTAACTAA+TGG + chr1_3:46571779-46571798 Msa0121120:intron 25.0%
! TAGATTTATTATCAGCACAT+TGG + chr1_3:46572177-46572196 Msa0121120:intron 25.0%
! ATATATCTATCACATTGTAG+AGG - chr1_3:46572457-46572476 None:intergenic 25.0%
! TAAGATACTGCAATTGATAA+TGG - chr1_3:46572508-46572527 None:intergenic 25.0%
!! GAATTTAAGATTAAGACCTA+GGG - chr1_3:46572689-46572708 None:intergenic 25.0%
! AGAAAAATAGAAATGCACAA+TGG - chr1_3:46573080-46573099 None:intergenic 25.0%
!!! TGTGCATTTCTATTTTTCTT+TGG + chr1_3:46573081-46573100 Msa0121120:intron 25.0%
!!! GTGCATTTCTATTTTTCTTT+GGG + chr1_3:46573082-46573101 Msa0121120:intron 25.0%
!!! TGCATTTCTATTTTTCTTTG+GGG + chr1_3:46573083-46573102 Msa0121120:intron 25.0%
! AAGCATACAAATGTTCTAAT+AGG - chr1_3:46573241-46573260 None:intergenic 25.0%
!!! AATTTTTTCCTTGTTTCAAC+TGG + chr1_3:46573280-46573299 Msa0121120:intron 25.0%
! CATATTTGATATGACTCTTA+TGG + chr1_3:46573413-46573432 Msa0121120:intron 25.0%
!!! AAAATTTTAAGAAGGGAAAG+TGG - chr1_3:46573640-46573659 None:intergenic 25.0%
!! ACTTTCCCTTCTTAAAATTT+TGG + chr1_3:46573639-46573658 Msa0121120:intron 25.0%
! CTTTGTGTAGTATTAAATAG+TGG - chr1_3:46573775-46573794 None:intergenic 25.0%
! CTATTTAATACTACACAAAG+TGG + chr1_3:46573775-46573794 Msa0121120:intron 25.0%
! AGCAAATAAAATTATGATGC+AGG - chr1_3:46573902-46573921 None:intergenic 25.0%
!!! TTGCTTTGTTTTGATATACT+AGG + chr1_3:46573957-46573976 Msa0121120:intron 25.0%
! CCCAAATTTATATTTCCATA+TGG - chr1_3:46574164-46574183 None:intergenic 25.0%
!! AATATAAATTTGGGTTTAGC+AGG + chr1_3:46574170-46574189 Msa0121120:CDS 25.0%
!! TTCTTGACTACTTACATTTT+AGG + chr1_3:46574217-46574236 Msa0121120:intron 25.0%
! AACAAAATGCTAGAATAAAG+TGG - chr1_3:46574264-46574283 None:intergenic 25.0%
TATTGAGAAATTAGTGGAAG+AGG - chr1_3:46560579-46560598 None:intergenic 30.0%
! TTTAAGGTGAAAGTTGATTC+CGG + chr1_3:46560820-46560839 Msa0121120:CDS 30.0%
TAAGATTGAGAAGAACGAAA+CGG + chr1_3:46560885-46560904 Msa0121120:CDS 30.0%
!!! TTTGATACTGGTTTTCTTGA+TGG + chr1_3:46560940-46560959 Msa0121120:CDS 30.0%
!!! GCCTGATACTGTTTTTAAAA+TGG + chr1_3:46561318-46561337 Msa0121120:intron 30.0%
GTAGGCTATAAATTCAAGAT+TGG + chr1_3:46561707-46561726 Msa0121120:intron 30.0%
GCTATAAATTCAAGATTGGA+GGG + chr1_3:46561711-46561730 Msa0121120:CDS 30.0%
!!! GTCATTGTCATTTTTGTCTT+TGG + chr1_3:46561796-46561815 Msa0121120:intron 30.0%
!! TCATTTTTGTCTTTGGGTTA+TGG + chr1_3:46561803-46561822 Msa0121120:intron 30.0%
ATAAGAATAAGAGACCACTA+GGG - chr1_3:46561857-46561876 None:intergenic 30.0%
TATAAGAATAAGAGACCACT+AGG - chr1_3:46561858-46561877 None:intergenic 30.0%
CAAGTAAAATACTTCTCTTC+AGG - chr1_3:46562089-46562108 None:intergenic 30.0%
!!! AAGAGAAGTATTTTACTTGC+AGG + chr1_3:46562090-46562109 Msa0121120:CDS 30.0%
!!! GAGCCTTACTTTTTCTTATT+TGG + chr1_3:46562127-46562146 Msa0121120:intron 30.0%
! TATTTCTTTGTTGACTGTCT+TGG + chr1_3:46562236-46562255 Msa0121120:intron 30.0%
GTATTTATTTATTCAGCCGT+TGG + chr1_3:46562411-46562430 Msa0121120:intron 30.0%
CCTAATAACATTGAGTACAT+AGG - chr1_3:46562523-46562542 None:intergenic 30.0%
CCTATGTACTCAATGTTATT+AGG + chr1_3:46562520-46562539 Msa0121120:intron 30.0%
!! TTGCAACAAATTGCTTTTCA+AGG + chr1_3:46562783-46562802 Msa0121120:intron 30.0%
CTATCTGACATAATCATTAC+AGG + chr1_3:46562872-46562891 Msa0121120:intron 30.0%
! CACTTTTCATTGCAAATACA+TGG - chr1_3:46563146-46563165 None:intergenic 30.0%
CATAAAAGAAAGTCAGAAGA+AGG - chr1_3:46563182-46563201 None:intergenic 30.0%
GTTATCCTAACTATATAAGG+GGG - chr1_3:46563556-46563575 None:intergenic 30.0%
ATGGCTGTAAACAATTTAAC+AGG - chr1_3:46563582-46563601 None:intergenic 30.0%
ACAACTGGTTACAATAAAGA+GGG - chr1_3:46563615-46563634 None:intergenic 30.0%
AACAACTGGTTACAATAAAG+AGG - chr1_3:46563616-46563635 None:intergenic 30.0%
! CACTGCAAATTTGAAGTAAT+TGG - chr1_3:46563681-46563700 None:intergenic 30.0%
CACAAATGAATTAGCAGAAA+GGG - chr1_3:46563753-46563772 None:intergenic 30.0%
ACACAAATGAATTAGCAGAA+AGG - chr1_3:46563754-46563773 None:intergenic 30.0%
TCTGTTCTAATTGACAGAAA+CGG + chr1_3:46563995-46564014 Msa0121120:intron 30.0%
AGGTAAAAAGATGTTGAAGA+AGG - chr1_3:46564775-46564794 None:intergenic 30.0%
AGACCACATAACTACTAATA+AGG - chr1_3:46564811-46564830 None:intergenic 30.0%
TGTCAGATTACAAATTCCAT+AGG - chr1_3:46564909-46564928 None:intergenic 30.0%
TAATACCTTTAGACAGCAAA+AGG - chr1_3:46564980-46564999 None:intergenic 30.0%
TACAATTAGTCATCTAAGTG+AGG + chr1_3:46565119-46565138 Msa0121120:intron 30.0%
ACAATTAGTCATCTAAGTGA+GGG + chr1_3:46565120-46565139 Msa0121120:intron 30.0%
TACAATACACCAAAAATGGT+GGG + chr1_3:46565245-46565264 Msa0121120:intron 30.0%
GAGCTTAATTGTCTTATGTT+TGG + chr1_3:46565343-46565362 Msa0121120:intron 30.0%
! ATGGAAAATTTGGTTCATGT+AGG + chr1_3:46565657-46565676 Msa0121120:intron 30.0%
! TGGAAAATTTGGTTCATGTA+GGG + chr1_3:46565658-46565677 Msa0121120:intron 30.0%
CACGTTGTCAAAATAATACA+AGG - chr1_3:46565754-46565773 None:intergenic 30.0%
!!! TTATTTTGACAACGTGTAGA+AGG + chr1_3:46565758-46565777 Msa0121120:intron 30.0%
GTACATGAATGTGATTTACT+AGG - chr1_3:46566157-46566176 None:intergenic 30.0%
CAAGAAAGAACTAGAAACAA+AGG - chr1_3:46566450-46566469 None:intergenic 30.0%
!!! ATTATTTTTTTGAGAGCCTG+AGG - chr1_3:46566488-46566507 None:intergenic 30.0%
TCAGGCTCTCAAAAAAATAA+TGG + chr1_3:46566487-46566506 Msa0121120:intron 30.0%
! CTTTTGCAATAAGAACATTG+AGG - chr1_3:46567210-46567229 None:intergenic 30.0%
! AGTTCTTGGATAATTGATTC+AGG + chr1_3:46567441-46567460 Msa0121120:intron 30.0%
TGAGAGAAACCAAATTGAAA+GGG - chr1_3:46567638-46567657 None:intergenic 30.0%
! ATCTAAAGTCTGATTCTTCT+TGG + chr1_3:46567775-46567794 Msa0121120:intron 30.0%
!! AATAAGTTTTGGTGAATTGG+AGG - chr1_3:46567811-46567830 None:intergenic 30.0%
CACCAAAACTTATTCATGAA+CGG + chr1_3:46567817-46567836 Msa0121120:intron 30.0%
! AACCGTTCATGAATAAGTTT+TGG - chr1_3:46567822-46567841 None:intergenic 30.0%
AAACTTATTCATGAACGGTT+TGG + chr1_3:46567822-46567841 Msa0121120:intron 30.0%
!!! ATTTTTAGTTTGGATAGGTG+AGG - chr1_3:46567852-46567871 None:intergenic 30.0%
!!! GTCTTTATTTTTTCAAGACC+TGG - chr1_3:46567882-46567901 None:intergenic 30.0%
! AACATGTTTTCCTAATTGAC+AGG - chr1_3:46567919-46567938 None:intergenic 30.0%
CAGTTATTCATTCAGATGTA+TGG + chr1_3:46567988-46568007 Msa0121120:intron 30.0%
GTTATTCATTCAGATGTATG+GGG + chr1_3:46567990-46568009 Msa0121120:intron 30.0%
!!! ACTTCTTTTTTGACATCACA+TGG + chr1_3:46568221-46568240 Msa0121120:intron 30.0%
CCGATTAATCAAAAAACAAG+CGG - chr1_3:46568390-46568409 None:intergenic 30.0%
!!! CCGCTTGTTTTTTGATTAAT+CGG + chr1_3:46568387-46568406 Msa0121120:intron 30.0%
! AGGTTCTTTAGGAAATAAGA+TGG - chr1_3:46568450-46568469 None:intergenic 30.0%
! CGTGGATTAATATGAAACAA+AGG - chr1_3:46568470-46568489 None:intergenic 30.0%
! CATATTAATCCACGTGTTTT+TGG + chr1_3:46568476-46568495 Msa0121120:intron 30.0%
CATCTGCTGAAACATAATAA+CGG - chr1_3:46568628-46568647 None:intergenic 30.0%
! ATATGGTTTTTCTTCGAAGA+AGG - chr1_3:46568654-46568673 None:intergenic 30.0%
! ACCGATGATGGTAAAAAATA+TGG - chr1_3:46568671-46568690 None:intergenic 30.0%
AATTGGAAAAACTTCTTGAG+TGG - chr1_3:46568705-46568724 None:intergenic 30.0%
! GTTTTTCCAATTCCCTATTT+TGG + chr1_3:46568713-46568732 Msa0121120:intron 30.0%
!! GAAAATGATGGACCAAAATA+GGG - chr1_3:46568728-46568747 None:intergenic 30.0%
!! AGAAAATGATGGACCAAAAT+AGG - chr1_3:46568729-46568748 None:intergenic 30.0%
TCATGAAAAGGAGAAAATGA+TGG - chr1_3:46568740-46568759 None:intergenic 30.0%
AATGATAAGAAGGAGAAAGA+CGG - chr1_3:46569024-46569043 None:intergenic 30.0%
ATTGATGAAATGCAAGCTTT+GGG + chr1_3:46569127-46569146 Msa0121120:intron 30.0%
ATAAATCTGGGTATAACCTT+TGG - chr1_3:46569278-46569297 None:intergenic 30.0%
AAAGGTTATACCCAGATTTA+TGG + chr1_3:46569277-46569296 Msa0121120:intron 30.0%
TCCTAATAGATGTGTTTACT+TGG + chr1_3:46569630-46569649 Msa0121120:intron 30.0%
ACCAAGTAAACACATCTATT+AGG - chr1_3:46569634-46569653 None:intergenic 30.0%
TAATAGATGTGTTTACTTGG+TGG + chr1_3:46569633-46569652 Msa0121120:intron 30.0%
! GGAAAGCTGAAATATTTTCT+TGG + chr1_3:46569751-46569770 Msa0121120:intron 30.0%
ACTTAAAGAAACTGCTATGT+TGG + chr1_3:46569837-46569856 Msa0121120:intron 30.0%
AAAAATTGTTACCCAACCAA+GGG + chr1_3:46569896-46569915 Msa0121120:intron 30.0%
ATTAAAAAACAACCAGGACA+AGG + chr1_3:46570081-46570100 Msa0121120:intron 30.0%
! TTAGTTCTTTCATGAAAGAC+TGG - chr1_3:46570417-46570436 None:intergenic 30.0%
TAAAGAAATCATCACCGAAT+CGG + chr1_3:46570482-46570501 Msa0121120:intron 30.0%
ACATCTTCACAAAATCCTTA+AGG + chr1_3:46570529-46570548 Msa0121120:intron 30.0%
CATCTTCACAAAATCCTTAA+GGG + chr1_3:46570530-46570549 Msa0121120:intron 30.0%
ATCTTCACAAAATCCTTAAG+GGG + chr1_3:46570531-46570550 Msa0121120:intron 30.0%
GAACAAATACTTTGAATTCG+CGG - chr1_3:46570558-46570577 None:intergenic 30.0%
GTACATGAATGTGATTTACT+AGG - chr1_3:46566157-46566176 None:intergenic 30.0%
TCAGATCGACAATGATTTAT+AGG + chr1_3:46570941-46570960 Msa0121120:intron 30.0%
TGTGAAAAGGAATATCATGT+GGG + chr1_3:46571034-46571053 Msa0121120:CDS 30.0%
TAACATCCAAAAGAGATTCA+GGG - chr1_3:46571271-46571290 None:intergenic 30.0%
ATAACATCCAAAAGAGATTC+AGG - chr1_3:46571272-46571291 None:intergenic 30.0%
AAAGCAAGAGGATAGATATT+TGG + chr1_3:46571298-46571317 Msa0121120:CDS 30.0%
!! ATAAGATGGAGACTTGTTAA+TGG + chr1_3:46571341-46571360 Msa0121120:CDS 30.0%
ACTTACGTTGAATATTGACA+GGG - chr1_3:46571408-46571427 None:intergenic 30.0%
AACTTACGTTGAATATTGAC+AGG - chr1_3:46571409-46571428 None:intergenic 30.0%
TGAAGAAGAAATATAAGGAC+AGG - chr1_3:46571435-46571454 None:intergenic 30.0%
CAAAAGATACAATCATGCAA+AGG - chr1_3:46571595-46571614 None:intergenic 30.0%
CAAAATAAATGCATGTTCAC+AGG + chr1_3:46571678-46571697 Msa0121120:intron 30.0%
AATCATTTCAAAGCTATTGC+TGG + chr1_3:46571918-46571937 Msa0121120:intron 30.0%
!! TTGATAATGGAAGGTATCAA+AGG - chr1_3:46572495-46572514 None:intergenic 30.0%
!! ATACTGCAATTGATAATGGA+AGG - chr1_3:46572504-46572523 None:intergenic 30.0%
!!! TATTTTGATGGGAATTGAAG+TGG - chr1_3:46572662-46572681 None:intergenic 30.0%
!!! CCTAGGGAAATTATTTTGAT+GGG - chr1_3:46572673-46572692 None:intergenic 30.0%
!!! ACCTAGGGAAATTATTTTGA+TGG - chr1_3:46572674-46572693 None:intergenic 30.0%
! GGAATTTAAGATTAAGACCT+AGG - chr1_3:46572690-46572709 None:intergenic 30.0%
GGTCTTAATCTTAAATTCCT+TGG + chr1_3:46572691-46572710 Msa0121120:intron 30.0%
TATCAAACACTCTGAATCAT+GGG - chr1_3:46572804-46572823 None:intergenic 30.0%
ACAAAAGTTATGGTAGGTTT+GGG - chr1_3:46572860-46572879 None:intergenic 30.0%
CAATTCACAAAAGTTATGGT+AGG - chr1_3:46572866-46572885 None:intergenic 30.0%
TGGACAATTCACAAAAGTTA+TGG - chr1_3:46572870-46572889 None:intergenic 30.0%
GATAAAACAATCATTGTGAG+TGG - chr1_3:46572895-46572914 None:intergenic 30.0%
!! GCATTTCTATTTTTCTTTGG+GGG + chr1_3:46573084-46573103 Msa0121120:intron 30.0%
TCTTGTGGAAAACTTGAAAA+GGG - chr1_3:46573111-46573130 None:intergenic 30.0%
ATCTTGTGGAAAACTTGAAA+AGG - chr1_3:46573112-46573131 None:intergenic 30.0%
AGATCACTATTGTTGAACTT+TGG + chr1_3:46573128-46573147 Msa0121120:intron 30.0%
TGAACTTTGGTATTTGTTTC+AGG + chr1_3:46573141-46573160 Msa0121120:intron 30.0%
TTATTCCTTCCATGGTTTAT+GGG + chr1_3:46573206-46573225 Msa0121120:CDS 30.0%
! ATTTTCTTACCCATAAACCA+TGG - chr1_3:46573218-46573237 None:intergenic 30.0%
AGTGTACTGTGCATTATTAA+TGG + chr1_3:46573351-46573370 Msa0121120:CDS 30.0%
TGCATTATTAATGGTCAAGT+AGG + chr1_3:46573360-46573379 Msa0121120:intron 30.0%
TGTGTCTTGTAGCAATTAAT+GGG - chr1_3:46573529-46573548 None:intergenic 30.0%
TTGTGTCTTGTAGCAATTAA+TGG - chr1_3:46573530-46573549 None:intergenic 30.0%
! TTTTCGATGGGAATATAAAG+TGG + chr1_3:46573667-46573686 Msa0121120:intron 30.0%
AATATAAAGTGGTCATGGTA+AGG + chr1_3:46573678-46573697 Msa0121120:intron 30.0%
TTGTTATAATTGACCTGAAC+AGG + chr1_3:46574045-46574064 Msa0121120:intron 30.0%
TGTTATAATTGACCTGAACA+GGG + chr1_3:46574046-46574065 Msa0121120:intron 30.0%
AAGAAAATATATACCTGCTC+AGG - chr1_3:46574202-46574221 None:intergenic 30.0%
TTCTTAAAACACCGAAGAAA+AGG - chr1_3:46574331-46574350 None:intergenic 30.0%
AATCTTACTCTTGCATGAGT+CGG - chr1_3:46560644-46560663 None:intergenic 35.0%
GCTGAAAATCGATGAAAATG+TGG + chr1_3:46560741-46560760 Msa0121120:CDS 35.0%
AATCGATGAAAATGTGGATG+CGG + chr1_3:46560747-46560766 Msa0121120:CDS 35.0%
! TCGTTAAATGGACTTCGAAA+CGG + chr1_3:46560782-46560801 Msa0121120:CDS 35.0%
TCAACTTTCACCTTAAACGA+CGG - chr1_3:46560817-46560836 None:intergenic 35.0%
! ATGAAGGAGCTTTTTGATAC+TGG + chr1_3:46560928-46560947 Msa0121120:CDS 35.0%
! TTATGTCGGTTGCAAAAAAG+AGG + chr1_3:46560975-46560994 Msa0121120:CDS 35.0%
TTCTGATTAAAGACGTGTCT+CGG + chr1_3:46561124-46561143 Msa0121120:intron 35.0%
GTAATCACATATGCTGTTGT+TGG - chr1_3:46561170-46561189 None:intergenic 35.0%
GGCTATAAATTCAAGATTGG+AGG + chr1_3:46561710-46561729 Msa0121120:intron 35.0%
!! TTTTGTCTTTGGGTTATGGT+TGG + chr1_3:46561807-46561826 Msa0121120:intron 35.0%
AAGAGTCTTCTTGAGCTATT+GGG + chr1_3:46561999-46562018 Msa0121120:CDS 35.0%
GTAAAATACTTCTCTTCAGG+CGG - chr1_3:46562086-46562105 None:intergenic 35.0%
! CTCTTTTCACAGTTGAAACA+GGG - chr1_3:46562312-46562331 None:intergenic 35.0%
! ACTCTTTTCACAGTTGAAAC+AGG - chr1_3:46562313-46562332 None:intergenic 35.0%
TGTTTCAACTGTGAAAAGAG+TGG + chr1_3:46562312-46562331 Msa0121120:CDS 35.0%
GTTTCAACTGTGAAAAGAGT+GGG + chr1_3:46562313-46562332 Msa0121120:CDS 35.0%
TTTCAACTGTGAAAAGAGTG+GGG + chr1_3:46562314-46562333 Msa0121120:CDS 35.0%
!!! TTAGGTTTTGGATAATGGTG+AGG + chr1_3:46562538-46562557 Msa0121120:intron 35.0%
AATGTCATATTCACTCTCTG+TGG + chr1_3:46562564-46562583 Msa0121120:intron 35.0%
AGCATAAGTTTCCAATCATG+TGG - chr1_3:46562699-46562718 None:intergenic 35.0%
AAACTCAACTCACATCATGT+GGG - chr1_3:46562743-46562762 None:intergenic 35.0%
AAAACTCAACTCACATCATG+TGG - chr1_3:46562744-46562763 None:intergenic 35.0%
AGATAAACATCTGCACAAGT+TGG - chr1_3:46562828-46562847 None:intergenic 35.0%
ACATTGTTTCACAAAACTGC+TGG + chr1_3:46563010-46563029 Msa0121120:intron 35.0%
! TCAATGATGTTTTCAACGAC+AGG - chr1_3:46563112-46563131 None:intergenic 35.0%
!! GATGGACTAGAAAACAGATA+TGG - chr1_3:46563240-46563259 None:intergenic 35.0%
CACGTTTCAGAAATACTAGA+TGG - chr1_3:46563258-46563277 None:intergenic 35.0%
AACAGAAGAAGAGAACAAAG+TGG + chr1_3:46563301-46563320 Msa0121120:intron 35.0%
ACAGAAGAAGAGAACAAAGT+GGG + chr1_3:46563302-46563321 Msa0121120:intron 35.0%
TTTAGCCCCCTTATATAGTT+AGG + chr1_3:46563548-46563567 Msa0121120:intron 35.0%
CAACTGGTTACAATAAAGAG+GGG - chr1_3:46563614-46563633 None:intergenic 35.0%
TGTAACCAGTTGTTATCACT+AGG + chr1_3:46563622-46563641 Msa0121120:intron 35.0%
! ATCCTCAACTGACTCTTATT+TGG - chr1_3:46563714-46563733 None:intergenic 35.0%
ACAAACAATTACTATCGCTG+AGG - chr1_3:46563811-46563830 None:intergenic 35.0%
TGCCTTAAGAAGAACATGTT+GGG - chr1_3:46563837-46563856 None:intergenic 35.0%
ATGCCTTAAGAAGAACATGT+TGG - chr1_3:46563838-46563857 None:intergenic 35.0%
AAGTAGCTTATTATGCACGT+GGG + chr1_3:46563910-46563929 Msa0121120:CDS 35.0%
!! GAGGGTATCAAAAAGAAATC+CGG + chr1_3:46564021-46564040 Msa0121120:CDS 35.0%
CTACTGCTTAAAAATTCCTG+AGG - chr1_3:46564113-46564132 None:intergenic 35.0%
GGGAACAAAAAGAAAACTCA+CGG - chr1_3:46564218-46564237 None:intergenic 35.0%
ATCTTGCATGCATTGTTTGT+TGG + chr1_3:46564441-46564460 Msa0121120:CDS 35.0%
TCTTGCATGCATTGTTTGTT+GGG + chr1_3:46564442-46564461 Msa0121120:CDS 35.0%
! GGAAATTTGTTTCTCTGTGA+TGG + chr1_3:46564470-46564489 Msa0121120:CDS 35.0%
TACCTTTATGAAATGCCCTT+GGG - chr1_3:46564499-46564518 None:intergenic 35.0%
TTACCTTTATGAAATGCCCT+TGG - chr1_3:46564500-46564519 None:intergenic 35.0%
! TTTTTCCTATACGCTACCAA+GGG - chr1_3:46564684-46564703 None:intergenic 35.0%
GTTTCCTTAAACAGTCACAA+AGG - chr1_3:46564710-46564729 None:intergenic 35.0%
TAGTAGTTATGTGGTCTACT+AGG + chr1_3:46564814-46564833 Msa0121120:intron 35.0%
TTGTAATCTGACATGCTTTC+TGG + chr1_3:46564916-46564935 Msa0121120:intron 35.0%
!! GTAAACCTTTTGCTGTCTAA+AGG + chr1_3:46564972-46564991 Msa0121120:intron 35.0%
CAATTAGTCATCTAAGTGAG+GGG + chr1_3:46565121-46565140 Msa0121120:intron 35.0%
TGCGTACAATACACCAAAAA+TGG + chr1_3:46565241-46565260 Msa0121120:intron 35.0%
GTACAATACACCAAAAATGG+TGG + chr1_3:46565244-46565263 Msa0121120:intron 35.0%
ACTAAAAAAAAAGGGCAACC+CGG - chr1_3:46565311-46565330 None:intergenic 35.0%
! CATAGTGAAAGACTTTGAAG+CGG + chr1_3:46565539-46565558 Msa0121120:CDS 35.0%
! GGAAAATTTGGTTCATGTAG+GGG + chr1_3:46565659-46565678 Msa0121120:intron 35.0%
TTATCGTCACTTCATCACAA+TGG - chr1_3:46565929-46565948 None:intergenic 35.0%
! TGACGATAAATTGCTAGCTT+GGG + chr1_3:46565940-46565959 Msa0121120:intron 35.0%
! TGCTCTAGATACCATGTTAA+AGG - chr1_3:46566299-46566318 None:intergenic 35.0%
! TTTAACATGGTATCTAGAGC+AGG + chr1_3:46566298-46566317 Msa0121120:intron 35.0%
!! CTTTCTTGCTTTTCTCACAA+TGG + chr1_3:46566462-46566481 Msa0121120:intron 35.0%
AAGAAACCAAAGTTCTACAG+AGG - chr1_3:46566590-46566609 None:intergenic 35.0%
! TCTGTAGAACTTTGGTTTCT+TGG + chr1_3:46566589-46566608 Msa0121120:intron 35.0%
CAACAGAAAAACGTGATGAA+TGG + chr1_3:46566656-46566675 Msa0121120:intron 35.0%
!! ATCAGCTTTGTTCTCTCATA+TGG + chr1_3:46566692-46566711 Msa0121120:intron 35.0%
!! GAAAGAGTGGCAAGTTTTAA+AGG - chr1_3:46566755-46566774 None:intergenic 35.0%
TTAAAACTTGCCACTCTTTC+TGG + chr1_3:46566755-46566774 Msa0121120:intron 35.0%
GTATGATGCTGCACAAAAAT+TGG + chr1_3:46566819-46566838 Msa0121120:intron 35.0%
AAACATAGGAAACCATGTCA+TGG - chr1_3:46566864-46566883 None:intergenic 35.0%
!! AGATTGAGCTTTGGAAACAT+AGG - chr1_3:46566878-46566897 None:intergenic 35.0%
!! TATATGGTGTTGGTTCTAAG+AGG + chr1_3:46566970-46566989 Msa0121120:intron 35.0%
CACGAACATGATCAAAATCT+GGG - chr1_3:46567002-46567021 None:intergenic 35.0%
TCACGAACATGATCAAAATC+TGG - chr1_3:46567003-46567022 None:intergenic 35.0%
!! TTACTTCTGTTTTAGGCGAA+GGG - chr1_3:46567089-46567108 None:intergenic 35.0%
!! TTTACTTCTGTTTTAGGCGA+AGG - chr1_3:46567090-46567109 None:intergenic 35.0%
AATAACAAGTGTCTTGTGTG+TGG - chr1_3:46567239-46567258 None:intergenic 35.0%
AGATTGAGAAATACAAGCAG+TGG - chr1_3:46567409-46567428 None:intergenic 35.0%
ACTGCTTGTATTTCTCAATC+TGG + chr1_3:46567408-46567427 Msa0121120:intron 35.0%
TCGGCTAGAGTAATAAAATG+AGG - chr1_3:46567528-46567547 None:intergenic 35.0%
! CATTTTATTACTCTAGCCGA+TGG + chr1_3:46567528-46567547 Msa0121120:intron 35.0%
!! AGTTCTGTCTTGTTTATACC+TGG + chr1_3:46567609-46567628 Msa0121120:intron 35.0%
CTGAGAGAAACCAAATTGAA+AGG - chr1_3:46567639-46567658 None:intergenic 35.0%
AACGAATGAGTTAGCATCAA+AGG - chr1_3:46567694-46567713 None:intergenic 35.0%
TGCTAACTCATTCGTTATAC+AGG + chr1_3:46567698-46567717 Msa0121120:intron 35.0%
TCTTGTGAATCCTGTCAATT+AGG + chr1_3:46567906-46567925 Msa0121120:intron 35.0%
TATGAGGACAAGAAGATTGA+TGG - chr1_3:46568253-46568272 None:intergenic 35.0%
AACAGAATGGAATAGCTGAA+AGG + chr1_3:46568279-46568298 Msa0121120:intron 35.0%
TTGCATGAAGTAACAATGTC+CGG - chr1_3:46568331-46568350 None:intergenic 35.0%
TTAGGAAATAAGATGGAGTG+AGG - chr1_3:46568443-46568462 None:intergenic 35.0%
TTTGTTCATGATCTTTCTCC+AGG + chr1_3:46568509-46568528 Msa0121120:intron 35.0%
AAAAACACACTTGATTGCTC+GGG - chr1_3:46568552-46568571 None:intergenic 35.0%
GAAAAACACACTTGATTGCT+CGG - chr1_3:46568553-46568572 None:intergenic 35.0%
! GCAATCAAGTGTGTTTTTCT+TGG + chr1_3:46568554-46568573 Msa0121120:intron 35.0%
! GTGTTTTTCTTGGATACTCT+AGG + chr1_3:46568564-46568583 Msa0121120:intron 35.0%
ACATAATAACGGTTGTGAAC+TGG - chr1_3:46568617-46568636 None:intergenic 35.0%
! GCTGAAACTGATTCATGAAA+AGG - chr1_3:46568752-46568771 None:intergenic 35.0%
AATTCGGTATTAGGAACATG+TGG - chr1_3:46568845-46568864 None:intergenic 35.0%
ACATGTTCCTAATACCGAAT+TGG + chr1_3:46568844-46568863 Msa0121120:intron 35.0%
! AGTGCCTCACAAACATTTTT+AGG - chr1_3:46569079-46569098 None:intergenic 35.0%
AGCTTGCATTTCATCAATCA+TGG - chr1_3:46569125-46569144 None:intergenic 35.0%
GATTGATGAAATGCAAGCTT+TGG + chr1_3:46569126-46569145 Msa0121120:intron 35.0%
TTGATGAAATGCAAGCTTTG+GGG + chr1_3:46569128-46569147 Msa0121120:intron 35.0%
ATAATCGAGGCCATAAATCT+GGG - chr1_3:46569290-46569309 None:intergenic 35.0%
!! AGAAAGTATCACCATAATCG+AGG - chr1_3:46569303-46569322 None:intergenic 35.0%
! ACAGAAGTAATTTTTGCCAC+AGG - chr1_3:46569328-46569347 None:intergenic 35.0%
ATTGATACAATGGCCAATGA+CGG - chr1_3:46569378-46569397 None:intergenic 35.0%
TCTACATGGAGATTTAGAAG+AGG + chr1_3:46569417-46569436 Msa0121120:intron 35.0%
GTAAACACATCTATTAGGAG+AGG - chr1_3:46569629-46569648 None:intergenic 35.0%
GTAGACGATATAGTCATAAC+TGG + chr1_3:46569661-46569680 Msa0121120:intron 35.0%
CAAAAATTGTTACCCAACCA+AGG + chr1_3:46569895-46569914 Msa0121120:intron 35.0%
AAAATTGTTACCCAACCAAG+GGG + chr1_3:46569897-46569916 Msa0121120:intron 35.0%
TCATCTACCTCACTATTACA+AGG + chr1_3:46569965-46569984 Msa0121120:intron 35.0%
! AAGGCCAGATATTTCTTTTG+CGG + chr1_3:46569984-46570003 Msa0121120:intron 35.0%
AATCCCCTCATAAAGATCAT+TGG + chr1_3:46570031-46570050 Msa0121120:intron 35.0%
ATCCCCTCATAAAGATCATT+GGG + chr1_3:46570032-46570051 Msa0121120:intron 35.0%
ATCCCAATGATCTTTATGAG+GGG - chr1_3:46570037-46570056 None:intergenic 35.0%
CATCCCAATGATCTTTATGA+GGG - chr1_3:46570038-46570057 None:intergenic 35.0%
TTGGAGGAAATCTTGTATCA+TGG + chr1_3:46570211-46570230 Msa0121120:intron 35.0%
! TGGATTGGAAGCTATATGTA+GGG - chr1_3:46570397-46570416 None:intergenic 35.0%
TCTTTCATGAAAGACTGGAT+TGG - chr1_3:46570412-46570431 None:intergenic 35.0%
! AGATTGATTGTCACTTCATC+CGG + chr1_3:46570445-46570464 Msa0121120:intron 35.0%
! CGGTGATGATTTCTTTAGAA+AGG - chr1_3:46570479-46570498 None:intergenic 35.0%
! CAAAGTATTTGTTCCAAGCT+TGG + chr1_3:46570564-46570583 Msa0121120:intron 35.0%
ATCTATATGCTCCATCTTGA+GGG + chr1_3:46570595-46570614 Msa0121120:intron 35.0%
! TTTTCACACTGCAATGAACA+AGG - chr1_3:46571022-46571041 None:intergenic 35.0%
TTGTTCATTGCAGTGTGAAA+AGG + chr1_3:46571021-46571040 Msa0121120:intron 35.0%
GTGTGAAAAGGAATATCATG+TGG + chr1_3:46571033-46571052 Msa0121120:intron 35.0%
CTGTTTGAGGGATCATAAAA+TGG + chr1_3:46571057-46571076 Msa0121120:CDS 35.0%
TGCAATACAATTACGTCCAA+TGG - chr1_3:46571155-46571174 None:intergenic 35.0%
ATTGGACGTAATTGTATTGC+AGG + chr1_3:46571154-46571173 Msa0121120:intron 35.0%
AATTGTATTGCAGGAATTGC+CGG + chr1_3:46571163-46571182 Msa0121120:intron 35.0%
AGAAGAAATATAAGGACAGG+CGG - chr1_3:46571432-46571451 None:intergenic 35.0%
TCATAACTTTATGTAGGGTG+TGG + chr1_3:46571464-46571483 Msa0121120:intron 35.0%
!!! CATTTTTTGAGGGACAAACA+AGG - chr1_3:46571504-46571523 None:intergenic 35.0%
CTTGTTTGTCCCTCAAAAAA+TGG + chr1_3:46571502-46571521 Msa0121120:intron 35.0%
!!! GCATCTCTACCATTTTTTGA+GGG - chr1_3:46571514-46571533 None:intergenic 35.0%
!!! AGCATCTCTACCATTTTTTG+AGG - chr1_3:46571515-46571534 None:intergenic 35.0%
CAAAAAATGGTAGAGATGCT+TGG + chr1_3:46571515-46571534 Msa0121120:intron 35.0%
AATATCTATCATTCCCAGCT+TGG + chr1_3:46571891-46571910 Msa0121120:intron 35.0%
GAAATGATTGTTTCCAAGCT+GGG - chr1_3:46571907-46571926 None:intergenic 35.0%
TGAAATGATTGTTTCCAAGC+TGG - chr1_3:46571908-46571927 None:intergenic 35.0%
TTGCTGATCTTCTAACTAAG+GGG - chr1_3:46571948-46571967 None:intergenic 35.0%
CTTGCTGATCTTCTAACTAA+GGG - chr1_3:46571949-46571968 None:intergenic 35.0%
AATCCTTTCAAAGCTATTGC+TGG + chr1_3:46571988-46572007 Msa0121120:intron 35.0%
CTTGCTGATCTTCTAACTAA+GGG - chr1_3:46571949-46571968 None:intergenic 35.0%
AGACATATGGAGTGTAAACT+AGG + chr1_3:46572053-46572072 Msa0121120:intron 35.0%
CCATCAAAGAAAAGTTAGAG+TGG - chr1_3:46572079-46572098 None:intergenic 35.0%
! CCACTCTAACTTTTCTTTGA+TGG + chr1_3:46572076-46572095 Msa0121120:intron 35.0%
! ACTATGGTTGAGGATCATTT+TGG - chr1_3:46572229-46572248 None:intergenic 35.0%
! ATACTTATGCTGACTATGCA+GGG - chr1_3:46572393-46572412 None:intergenic 35.0%
! TATACTTATGCTGACTATGC+AGG - chr1_3:46572394-46572413 None:intergenic 35.0%
! GTAGAGGAATTTTGTTCGAA+CGG - chr1_3:46572441-46572460 None:intergenic 35.0%
! AACCAGTAATGTGTTTCTGT+TGG + chr1_3:46572608-46572627 Msa0121120:intron 35.0%
! ACCAGTAATGTGTTTCTGTT+GGG + chr1_3:46572609-46572628 Msa0121120:intron 35.0%
TGCAAATTCCTTTCTTAGAG+TGG + chr1_3:46572635-46572654 Msa0121120:intron 35.0%
GCAAATTCCTTTCTTAGAGT+GGG + chr1_3:46572636-46572655 Msa0121120:intron 35.0%
CCCATCAAAATAATTTCCCT+AGG + chr1_3:46572670-46572689 Msa0121120:intron 35.0%
TCTTAAATTCCTTGGCTAAG+TGG + chr1_3:46572699-46572718 Msa0121120:intron 35.0%
ATCAAACACTCTGAATCATG+GGG - chr1_3:46572803-46572822 None:intergenic 35.0%
CTATCAAACACTCTGAATCA+TGG - chr1_3:46572805-46572824 None:intergenic 35.0%
CAAAAGTTATGGTAGGTTTG+GGG - chr1_3:46572859-46572878 None:intergenic 35.0%
CACAAAAGTTATGGTAGGTT+TGG - chr1_3:46572861-46572880 None:intergenic 35.0%
AACAATCATTGTGAGTGGTT+TGG - chr1_3:46572890-46572909 None:intergenic 35.0%
GTTCAACAATAGTGATCTTG+TGG - chr1_3:46573126-46573145 None:intergenic 35.0%
CATAAACCATGGAAGGAATA+AGG - chr1_3:46573207-46573226 None:intergenic 35.0%
CTTATTCCTTCCATGGTTTA+TGG + chr1_3:46573205-46573224 Msa0121120:CDS 35.0%
ATGATAAGCCAGTTGAAACA+AGG - chr1_3:46573291-46573310 None:intergenic 35.0%
GCTTATCATTCAAATGCAGA+CGG + chr1_3:46573302-46573321 Msa0121120:intron 35.0%
! AATTTGCAGACTCAGGATTT+TGG + chr1_3:46573325-46573344 Msa0121120:CDS 35.0%
!!! AACTTGATTGGCCTTTTCAT+TGG + chr1_3:46573587-46573606 Msa0121120:intron 35.0%
!!! ACTTGATTGGCCTTTTCATT+GGG + chr1_3:46573588-46573607 Msa0121120:intron 35.0%
TTTAAGAAGGGAAAGTGGTT+GGG - chr1_3:46573635-46573654 None:intergenic 35.0%
!! TTTTAAGAAGGGAAAGTGGT+TGG - chr1_3:46573636-46573655 None:intergenic 35.0%
ATGGGAATATAAAGTGGTCA+TGG + chr1_3:46573673-46573692 Msa0121120:intron 35.0%
!!! TTTGCTCTTGGTGATGTTTT+TGG + chr1_3:46573916-46573935 Msa0121120:intron 35.0%
AAGGTTCTTCACATTCAAGA+AGG - chr1_3:46574113-46574132 None:intergenic 35.0%
!! CTACTTACATTTTAGGAGCT+AGG + chr1_3:46574224-46574243 Msa0121120:intron 35.0%
!! TTGGCAGTTCTTTCTAAAGT+TGG - chr1_3:46574411-46574430 None:intergenic 35.0%
!! AACAGTTGATGGCATTCAAA+GGG + chr1_3:46574429-46574448 Msa0121120:CDS 35.0%
GACAGTTATGCTTCACAAAT+CGG + chr1_3:46574451-46574470 Msa0121120:CDS 35.0%
!! ATGACGTTGGGTTCTGAATT+TGG - chr1_3:46560396-46560415 None:intergenic 40.0%
AAATTCAGAACCCAACGTCA+TGG + chr1_3:46560395-46560414 Msa0121120:five_prime_UTR 40.0%
AATTCAGAACCCAACGTCAT+GGG + chr1_3:46560396-46560415 Msa0121120:five_prime_UTR 40.0%
ATTGGGATTGAGGAAGAAGA+GGG - chr1_3:46560481-46560500 None:intergenic 40.0%
! GATATTTGGGATTGGGATTG+AGG - chr1_3:46560491-46560510 None:intergenic 40.0%
! AGAGGGAGATATTTGGGATT+GGG - chr1_3:46560498-46560517 None:intergenic 40.0%
!! TTTTGGAGGAGAGAGAGTTT+CGG - chr1_3:46560523-46560542 None:intergenic 40.0%
!! AGTGGAAGAGGCATTGAAAA+TGG - chr1_3:46560567-46560586 None:intergenic 40.0%
!!! TCATCGATTTTCAGCCTCTT+CGG - chr1_3:46560736-46560755 None:intergenic 40.0%
TGAAGAACGACGTCGTTAAA+TGG + chr1_3:46560770-46560789 Msa0121120:CDS 40.0%
ATTGAGAAGAACGAAACGGT+TGG + chr1_3:46560889-46560908 Msa0121120:CDS 40.0%
TGAGAAGTGGTTGACTATGA+AGG + chr1_3:46560912-46560931 Msa0121120:CDS 40.0%
! GGTGTTCCTGTTGTTTATGT+CGG + chr1_3:46560961-46560980 Msa0121120:CDS 40.0%
TTGCAACCGACATAAACAAC+AGG - chr1_3:46560970-46560989 None:intergenic 40.0%
TGTCGTAATGACCCATGTTA+AGG - chr1_3:46561402-46561421 None:intergenic 40.0%
CCATACTATCTTGTCGACAT+TGG - chr1_3:46561618-46561637 None:intergenic 40.0%
CCAATGTCGACAAGATAGTA+TGG + chr1_3:46561615-46561634 Msa0121120:intron 40.0%
GTCGACAAGATAGTATGGTA+TGG + chr1_3:46561620-46561639 Msa0121120:intron 40.0%
! TTTTGATGCGGTGTGATTGT+AGG + chr1_3:46561689-46561708 Msa0121120:intron 40.0%
GAAGAGTCTTCTTGAGCTAT+TGG + chr1_3:46561998-46562017 Msa0121120:CDS 40.0%
ACAGTTCCTACTAAACCCAA+CGG - chr1_3:46562430-46562449 None:intergenic 40.0%
CTTTCGTACGCTCATTCTTA+AGG - chr1_3:46562479-46562498 None:intergenic 40.0%
CTTAAGAATGAGCGTACGAA+AGG + chr1_3:46562477-46562496 Msa0121120:intron 40.0%
!!! TGATGTTTTGGCCCTAATTG+TGG + chr1_3:46562589-46562608 Msa0121120:intron 40.0%
GAAAGTCAGAAGAAGGGAAA+AGG - chr1_3:46563175-46563194 None:intergenic 40.0%
CTAGAAAACAGATATGGTCG+AGG - chr1_3:46563234-46563253 None:intergenic 40.0%
GAAGAAAAGTTTGTGCAGCA+TGG + chr1_3:46563498-46563517 Msa0121120:CDS 40.0%
CAGCATGGAAACAAAGTATG+TGG + chr1_3:46563513-46563532 Msa0121120:intron 40.0%
TAAAGAGGGGAAAAGAGACA+TGG - chr1_3:46563601-46563620 None:intergenic 40.0%
GATGACCTAGTGATAACAAC+TGG - chr1_3:46563630-46563649 None:intergenic 40.0%
! CTCAACTGACTCTTATTTGG+TGG - chr1_3:46563711-46563730 None:intergenic 40.0%
CACCAAATAAGAGTCAGTTG+AGG + chr1_3:46563709-46563728 Msa0121120:CDS 40.0%
CACCCAACATGTTCTTCTTA+AGG + chr1_3:46563832-46563851 Msa0121120:intron 40.0%
GAAGTAGCTTATTATGCACG+TGG + chr1_3:46563909-46563928 Msa0121120:CDS 40.0%
TAATTGACAGAAACGGCTTG+AGG + chr1_3:46564002-46564021 Msa0121120:intron 40.0%
AATTGACAGAAACGGCTTGA+GGG + chr1_3:46564003-46564022 Msa0121120:intron 40.0%
!! ACAGCATCGACAAAGAATTC+CGG - chr1_3:46564043-46564062 None:intergenic 40.0%
AGAGGAATAATGCCAACTCA+TGG - chr1_3:46564388-46564407 None:intergenic 40.0%
! TGCATTTGCGATCTTTTGAG+AGG - chr1_3:46564406-46564425 None:intergenic 40.0%
TTCTCATTTCTGTATCCCCT+TGG + chr1_3:46564665-46564684 Msa0121120:intron 40.0%
! TTTTCCTATACGCTACCAAG+GGG - chr1_3:46564683-46564702 None:intergenic 40.0%
! CTTTTTCCTATACGCTACCA+AGG - chr1_3:46564685-46564704 None:intergenic 40.0%
AGCTCCTTTGTGACTGTTTA+AGG + chr1_3:46564703-46564722 Msa0121120:intron 40.0%
! CATCTTTTTACCTTCATCGC+TGG + chr1_3:46564782-46564801 Msa0121120:intron 40.0%
AATAAGGAAACCAGCGATGA+AGG - chr1_3:46564795-46564814 None:intergenic 40.0%
ACTTAATTGGAAGCAGCAGT+TGG + chr1_3:46565069-46565088 Msa0121120:intron 40.0%
CTTAATTGGAAGCAGCAGTT+GGG + chr1_3:46565070-46565089 Msa0121120:intron 40.0%
AGCCTCTTGTGTCAAAAACA+GGG + chr1_3:46565212-46565231 Msa0121120:intron 40.0%
!!! TACCCTGTTTTTGACACAAG+AGG - chr1_3:46565217-46565236 None:intergenic 40.0%
CTTGTGTCAAAAACAGGGTA+AGG + chr1_3:46565217-46565236 Msa0121120:intron 40.0%
! AGGAACATGTGTTGACAGAT+TGG - chr1_3:46565423-46565442 None:intergenic 40.0%
ATCTGTCAACACATGTTCCT+TGG + chr1_3:46565423-46565442 Msa0121120:CDS 40.0%
CTCTTGGCAATCTGTTCTAT+AGG - chr1_3:46565510-46565529 None:intergenic 40.0%
GGGAAAAATTATGGCTACTG+AGG - chr1_3:46565622-46565641 None:intergenic 40.0%
GTGACGATAAATTGCTAGCT+TGG + chr1_3:46565939-46565958 Msa0121120:intron 40.0%
AGCTTGGGATGATGCATTTA+TGG + chr1_3:46565955-46565974 Msa0121120:intron 40.0%
TATAAACCAGATCAGCTGAG+TGG + chr1_3:46566242-46566261 Msa0121120:intron 40.0%
TAGAGCAGGTTCTCTTTGAA+GGG + chr1_3:46566312-46566331 Msa0121120:intron 40.0%
GTTCCAGAGAAAGAGAAAGT+AGG - chr1_3:46566514-46566533 None:intergenic 40.0%
CTAAAGTTCGTCAAGATGGT+CGG - chr1_3:46566730-46566749 None:intergenic 40.0%
GTGCAGCATCATACAATTGT+TGG - chr1_3:46566813-46566832 None:intergenic 40.0%
!! ATGGTCTGTTTGCTTTAGAG+TGG - chr1_3:46566845-46566864 None:intergenic 40.0%
AAAGCAAACAGACCATGACA+TGG + chr1_3:46566849-46566868 Msa0121120:intron 40.0%
TGTTTCCAAAGCTCAATCTG+CGG + chr1_3:46566879-46566898 Msa0121120:intron 40.0%
AAGGAACTTCTTGTCCAGTT+AGG - chr1_3:46567032-46567051 None:intergenic 40.0%
!! GAAGTATTCGCAGATTTTCC+AGG - chr1_3:46567276-46567295 None:intergenic 40.0%
CATCTCTGATGTTTCAGACT+TGG - chr1_3:46567298-46567317 None:intergenic 40.0%
CTGGTCATGATCAAAGTTCT+TGG + chr1_3:46567427-46567446 Msa0121120:intron 40.0%
ATTACCAGCAATGTGATCAG+AGG - chr1_3:46567469-46567488 None:intergenic 40.0%
TCTGATCACATTGCTGGTAA+TGG + chr1_3:46567468-46567487 Msa0121120:intron 40.0%
!! TGCTGCAACTTTAGAACCAT+CGG - chr1_3:46567547-46567566 None:intergenic 40.0%
!! TGGTTCTAAAGTTGCAGCAA+AGG + chr1_3:46567548-46567567 Msa0121120:intron 40.0%
!! GGTTCTAAAGTTGCAGCAAA+GGG + chr1_3:46567549-46567568 Msa0121120:intron 40.0%
! AAAGTTGCAGCAAAGGGTAT+AGG + chr1_3:46567555-46567574 Msa0121120:intron 40.0%
CTTAAGGACAGAGAAGTAGT+GGG - chr1_3:46567591-46567610 None:intergenic 40.0%
ACTTAAGGACAGAGAAGTAG+TGG - chr1_3:46567592-46567611 None:intergenic 40.0%
TCATTCGTTATACAGGAACG+TGG + chr1_3:46567705-46567724 Msa0121120:intron 40.0%
AGCTATTCCATTCTGTTGAG+GGG - chr1_3:46568276-46568295 None:intergenic 40.0%
CAGCTATTCCATTCTGTTGA+GGG - chr1_3:46568277-46568296 None:intergenic 40.0%
TCAGCTATTCCATTCTGTTG+AGG - chr1_3:46568278-46568297 None:intergenic 40.0%
TGCATGAAGTAACAATGTCC+GGG - chr1_3:46568330-46568349 None:intergenic 40.0%
CAAGTACTTCCAAAAACACG+TGG - chr1_3:46568488-46568507 None:intergenic 40.0%
AAAACACACTTGATTGCTCG+GGG - chr1_3:46568551-46568570 None:intergenic 40.0%
GTGTTAGATTCAACCGATGA+TGG - chr1_3:46568683-46568702 None:intergenic 40.0%
GATGGACCAAAATAGGGAAT+TGG - chr1_3:46568722-46568741 None:intergenic 40.0%
GTAATGAGTGGTCTATGAGA+TGG - chr1_3:46568809-46568828 None:intergenic 40.0%
GTTCCTAATACCGAATTGGA+AGG + chr1_3:46568848-46568867 Msa0121120:intron 40.0%
TCTTTCAGTGCCTTCCAATT+CGG - chr1_3:46568861-46568880 None:intergenic 40.0%
AATCAGGGATTTCGTCAATC+AGG - chr1_3:46568928-46568947 None:intergenic 40.0%
AATCCCTGATTTATCGATCG+CGG + chr1_3:46568937-46568956 Msa0121120:intron 40.0%
TAACCGCGATCGATAAATCA+GGG - chr1_3:46568943-46568962 None:intergenic 40.0%
TGGGTCTATGCTGTTAAAGT+TGG + chr1_3:46569211-46569230 Msa0121120:intron 40.0%
GCTGTTAAAGTTGGACCTAA+TGG + chr1_3:46569220-46569239 Msa0121120:intron 40.0%
AGACGATCAATCTGTCCATT+AGG - chr1_3:46569238-46569257 None:intergenic 40.0%
TATAACCTTTGGCCACCAAA+CGG - chr1_3:46569267-46569286 None:intergenic 40.0%
CATAATCGAGGCCATAAATC+TGG - chr1_3:46569291-46569310 None:intergenic 40.0%
CAGATTTATGGCCTCGATTA+TGG + chr1_3:46569289-46569308 Msa0121120:intron 40.0%
ATTTATATGGAGCAACCACC+TGG + chr1_3:46569442-46569461 Msa0121120:intron 40.0%
!! CTAGGTTGGTTTGCAAATTG+CGG + chr1_3:46569485-46569504 Msa0121120:intron 40.0%
TGGATTGAAACGTAGTGAAG+CGG + chr1_3:46569579-46569598 Msa0121120:intron 40.0%
CACATCTATTAGGAGAGGTA+TGG - chr1_3:46569624-46569643 None:intergenic 40.0%
! ATTCCGACATTTTCAGACCA+AGG + chr1_3:46569723-46569742 Msa0121120:intron 40.0%
GATCCTTGGTCTGAAAATGT+CGG - chr1_3:46569729-46569748 None:intergenic 40.0%
! CATTTTCAGACCAAGGATCT+AGG + chr1_3:46569730-46569749 Msa0121120:intron 40.0%
TTTCAGCTTTCCTAGATCCT+TGG - chr1_3:46569743-46569762 None:intergenic 40.0%
GAAGTTGCTCAGTCAATGAA+CGG + chr1_3:46569778-46569797 Msa0121120:intron 40.0%
AAGTTGCTCAGTCAATGAAC+GGG + chr1_3:46569779-46569798 Msa0121120:intron 40.0%
ACGGGGTTATCATTTCACAA+AGG + chr1_3:46569797-46569816 Msa0121120:intron 40.0%
TACCTTTCAGGATCGGAATA+AGG - chr1_3:46569925-46569944 None:intergenic 40.0%
!! TATCTGGCCTTGTAATAGTG+AGG - chr1_3:46569975-46569994 None:intergenic 40.0%
CCAACCGCAAAAGAAATATC+TGG - chr1_3:46569991-46570010 None:intergenic 40.0%
! CCAGATATTTCTTTTGCGGT+TGG + chr1_3:46569988-46570007 Msa0121120:intron 40.0%
! TATTTCTTTTGCGGTTGGAG+TGG + chr1_3:46569993-46570012 Msa0121120:intron 40.0%
GCATCCCAATGATCTTTATG+AGG - chr1_3:46570039-46570058 None:intergenic 40.0%
AGGACTGCTTTATGAAGACA+AGG + chr1_3:46570101-46570120 Msa0121120:intron 40.0%
GGACTGCTTTATGAAGACAA+GGG + chr1_3:46570102-46570121 Msa0121120:intron 40.0%
!! AAGGGAAGCACTCAAATAGT+TGG + chr1_3:46570120-46570139 Msa0121120:intron 40.0%
! TTGGATTTTGCGATGCAGAT+TGG + chr1_3:46570139-46570158 Msa0121120:intron 40.0%
! TGGATTTTGCGATGCAGATT+GGG + chr1_3:46570140-46570159 Msa0121120:intron 40.0%
!! TCAGGGTATTGTGTGTCTAT+TGG + chr1_3:46570192-46570211 Msa0121120:intron 40.0%
AGAAGCAAAATGTTGTTGCC+AGG + chr1_3:46570241-46570260 Msa0121120:intron 40.0%
AGAGGCTGAATATAGAGCTA+TGG + chr1_3:46570272-46570291 Msa0121120:intron 40.0%
TAGCTACATGTGAGCTCATT+TGG + chr1_3:46570298-46570317 Msa0121120:intron 40.0%
! CTGGATTGGAAGCTATATGT+AGG - chr1_3:46570398-46570417 None:intergenic 40.0%
! GATTGATTGTCACTTCATCC+GGG + chr1_3:46570446-46570465 Msa0121120:intron 40.0%
! CTTTAGAAAGGACTTTCTCC+CGG - chr1_3:46570467-46570486 None:intergenic 40.0%
ATCGTTAGAGCTAACCGATT+CGG - chr1_3:46570499-46570518 None:intergenic 40.0%
!! GGTTAGCTCTAACGATCAAT+TGG + chr1_3:46570503-46570522 Msa0121120:intron 40.0%
TAGATCAAATGCTCCAAGCT+TGG - chr1_3:46570580-46570599 None:intergenic 40.0%
GATCTATATGCTCCATCTTG+AGG + chr1_3:46570594-46570613 Msa0121120:intron 40.0%
TCTATATGCTCCATCTTGAG+GGG + chr1_3:46570596-46570615 Msa0121120:intron 40.0%
TATAAACCAGATCAGCTGAG+TGG + chr1_3:46566242-46566261 Msa0121120:intron 40.0%
! AATATCATGTGGGCTGTTTG+AGG + chr1_3:46571044-46571063 Msa0121120:CDS 40.0%
! ATATCATGTGGGCTGTTTGA+GGG + chr1_3:46571045-46571064 Msa0121120:CDS 40.0%
CAATTACGTCCAATGGACAA+AGG - chr1_3:46571148-46571167 None:intergenic 40.0%
!! TTTTGGAGAACCTCCTAGTT+AGG + chr1_3:46571231-46571250 Msa0121120:CDS 40.0%
TTTGGAGAACCTCCTAGTTA+GGG + chr1_3:46571232-46571251 Msa0121120:CDS 40.0%
! GAAACTCCCTGAATCTCTTT+TGG + chr1_3:46571262-46571281 Msa0121120:CDS 40.0%
GATATTCATTCACCAGCTTG+AGG - chr1_3:46571877-46571896 None:intergenic 40.0%
CCTTGCTGATCTTCTAACTA+AGG - chr1_3:46571950-46571969 None:intergenic 40.0%
CCTTAGTTAGAAGATCAGCA+AGG + chr1_3:46571947-46571966 Msa0121120:intron 40.0%
AAAGGATTGTTTCCAACCCA+AGG - chr1_3:46571976-46571995 None:intergenic 40.0%
!! TGACCAGCAATAGCTTTGAA+AGG - chr1_3:46571924-46571943 None:intergenic 40.0%
CCTTGCTGATCTTCTAACTA+AGG - chr1_3:46571950-46571969 None:intergenic 40.0%
CCTTAGTTAGAAGATCAGCA+AGG + chr1_3:46571947-46571966 Msa0121120:intron 40.0%
TAGGTGAACTACTATGGTTG+AGG - chr1_3:46572239-46572258 None:intergenic 40.0%
AAGGGATAGGTGAACTACTA+TGG - chr1_3:46572245-46572264 None:intergenic 40.0%
ACTTGGAAGAGTTAAAAGCG+TGG - chr1_3:46572310-46572329 None:intergenic 40.0%
! GGAATTTTGTTCGAACGGAA+TGG - chr1_3:46572436-46572455 None:intergenic 40.0%
!! GGAAGGTATCAAAGGTTAGT+CGG - chr1_3:46572487-46572506 None:intergenic 40.0%
TGATCCAAATGTGAAGTTGC+AGG - chr1_3:46572539-46572558 None:intergenic 40.0%
TCCCAACAGAAACACATTAC+TGG - chr1_3:46572613-46572632 None:intergenic 40.0%
TAAATTCCTTGGCTAAGTGG+TGG + chr1_3:46572702-46572721 Msa0121120:intron 40.0%
GTGGATGACATAATAGTGAC+AGG - chr1_3:46572758-46572777 None:intergenic 40.0%
! AGCAGTGTTATTGGTGTATG+TGG - chr1_3:46572777-46572796 None:intergenic 40.0%
TTGGGGTTCAAACAAAGTCA+AGG - chr1_3:46572842-46572861 None:intergenic 40.0%
! CAGTTTGTTCACCATATCCA+GGG + chr1_3:46572955-46572974 Msa0121120:intron 40.0%
! AGTTTGTTCACCATATCCAG+GGG + chr1_3:46572956-46572975 Msa0121120:intron 40.0%
TCTTACCCATAAACCATGGA+AGG - chr1_3:46573214-46573233 None:intergenic 40.0%
GATACCACAGATGAACTTCA+AGG - chr1_3:46573464-46573483 None:intergenic 40.0%
AAGTTCATCTGTGGTATCTG+CGG + chr1_3:46573466-46573485 Msa0121120:intron 40.0%
GACTGTACTGCTAACTTGAT+TGG + chr1_3:46573575-46573594 Msa0121120:intron 40.0%
! ATTGGTGGTACCCAATGAAA+AGG - chr1_3:46573601-46573620 None:intergenic 40.0%
TTAAGAAGGGAAAGTGGTTG+GGG - chr1_3:46573634-46573653 None:intergenic 40.0%
!!! TTGTTTTGACGAGTTCCCTT+AGG + chr1_3:46573799-46573818 Msa0121120:intron 40.0%
CAATGCACGAGAACAATGTT+TGG - chr1_3:46574078-46574097 None:intergenic 40.0%
CATTGTTCTCGTGCATTGAA+AGG + chr1_3:46574080-46574099 Msa0121120:CDS 40.0%
CTGAAGAAGCAGAATCCATA+TGG + chr1_3:46574146-46574165 Msa0121120:CDS 40.0%
! TTTAGGGTAGGGAATACGAA+TGG - chr1_3:46574357-46574376 None:intergenic 40.0%
!!! TACTCGGTCATTTTAGGGTA+GGG - chr1_3:46574368-46574387 None:intergenic 40.0%
AAAGAACTGCCAACAGTTGA+TGG + chr1_3:46574418-46574437 Msa0121120:CDS 40.0%
CTTTGAATGCCATCAACTGT+TGG - chr1_3:46574430-46574449 None:intergenic 40.0%
!! CAACAGTTGATGGCATTCAA+AGG + chr1_3:46574428-46574447 Msa0121120:CDS 40.0%
TTGGGATTGAGGAAGAAGAG+GGG - chr1_3:46560480-46560499 None:intergenic 45.0%
GATTGGGATTGAGGAAGAAG+AGG - chr1_3:46560482-46560501 None:intergenic 45.0%
! GAGAGGGAGATATTTGGGAT+TGG - chr1_3:46560499-46560518 None:intergenic 45.0%
TCGGAGAGAGGGAGATATTT+GGG - chr1_3:46560504-46560523 None:intergenic 45.0%
TTCGGAGAGAGGGAGATATT+TGG - chr1_3:46560505-46560524 None:intergenic 45.0%
! AGAGAGAGAGAGTAGGGTTT+TGG - chr1_3:46560540-46560559 None:intergenic 45.0%
AGGTGAATCTGAAGAAGAGG+GGG - chr1_3:46560609-46560628 None:intergenic 45.0%
GAGGTGAATCTGAAGAAGAG+GGG - chr1_3:46560610-46560629 None:intergenic 45.0%
GGAGGTGAATCTGAAGAAGA+GGG - chr1_3:46560611-46560630 None:intergenic 45.0%
! TTGCATGAGTCGGTTTCCAT+GGG - chr1_3:46560634-46560653 None:intergenic 45.0%
TCGATAACGAAGAACCGAAG+AGG + chr1_3:46560719-46560738 Msa0121120:CDS 45.0%
! AATGGACTTCGAAACGGCAA+CGG + chr1_3:46560788-46560807 Msa0121120:CDS 45.0%
AGCAGCAGAAACATCTTCAC+CGG - chr1_3:46560842-46560861 None:intergenic 45.0%
CATGTCACTGTTCGTGTTGT+CGG + chr1_3:46561219-46561238 Msa0121120:intron 45.0%
! GTAGCACTAGAAGGCATGTT+CGG + chr1_3:46561521-46561540 Msa0121120:intron 45.0%
!! GTTCGGTGTCTGATACGTAT+TGG + chr1_3:46561538-46561557 Msa0121120:intron 45.0%
!! GGTAGATAGCGGGTACTAAT+GGG - chr1_3:46561836-46561855 None:intergenic 45.0%
ATGAATCTCAAACGTGGAGG+GGG - chr1_3:46561928-46561947 None:intergenic 45.0%
CATGAATCTCAAACGTGGAG+GGG - chr1_3:46561929-46561948 None:intergenic 45.0%
GCATGAATCTCAAACGTGGA+GGG - chr1_3:46561930-46561949 None:intergenic 45.0%
ACAGGCATGAATCTCAAACG+TGG - chr1_3:46561934-46561953 None:intergenic 45.0%
! TTGAGCTATTGGGAGTATGC+AGG + chr1_3:46562009-46562028 Msa0121120:CDS 45.0%
! TGAGCTATTGGGAGTATGCA+GGG + chr1_3:46562010-46562029 Msa0121120:CDS 45.0%
GTGGCTTCCATAGAATGTGA+GGG - chr1_3:46562041-46562060 None:intergenic 45.0%
GCTTATATGCCATTCTTGCG+TGG + chr1_3:46562336-46562355 Msa0121120:CDS 45.0%
TCTGAAGACAGTCCTATTCG+TGG + chr1_3:46562370-46562389 Msa0121120:CDS 45.0%
! CTTTTGCCAACTCCACGAAT+AGG - chr1_3:46562385-46562404 None:intergenic 45.0%
ATTCAGCCGTTGGGTTTAGT+AGG + chr1_3:46562421-46562440 Msa0121120:intron 45.0%
! CTCTCTGTGGTCTGATGTTT+TGG + chr1_3:46562577-46562596 Msa0121120:intron 45.0%
AACAAGGGGAGCCACAATTA+GGG - chr1_3:46562603-46562622 None:intergenic 45.0%
ATACGTGAGCCGAAGAACAA+GGG - chr1_3:46562618-46562637 None:intergenic 45.0%
GCTCACGTATGCCAAGTATT+TGG + chr1_3:46562628-46562647 Msa0121120:intron 45.0%
CACGTATGCCAAGTATTTGG+AGG + chr1_3:46562631-46562650 Msa0121120:intron 45.0%
GTATGCCAAGTATTTGGAGG+CGG + chr1_3:46562634-46562653 Msa0121120:intron 45.0%
TGTTTGTGGAGCCACATGAT+TGG + chr1_3:46562685-46562704 Msa0121120:intron 45.0%
ACTCACATCATGTGGGTGAA+AGG - chr1_3:46562736-46562755 None:intergenic 45.0%
!! TTCCAAGAAGAGTGCTTCTG+TGG + chr1_3:46563462-46563481 Msa0121120:CDS 45.0%
TAAGCTACTTCAGCTCCATC+AGG - chr1_3:46563900-46563919 None:intergenic 45.0%
TTGTCGATGCTGTAACACTG+AGG + chr1_3:46564050-46564069 Msa0121120:CDS 45.0%
TATGTGTATAGGCACACCTC+AGG + chr1_3:46564094-46564113 Msa0121120:intron 45.0%
TGCATGAACCTCAAACTGTG+CGG - chr1_3:46564174-46564193 None:intergenic 45.0%
! CACAGTTTGAGGTTCATGCA+GGG + chr1_3:46564174-46564193 Msa0121120:CDS 45.0%
! TCTTTTTGTTCCCTATGCCC+TGG + chr1_3:46564225-46564244 Msa0121120:intron 45.0%
! CTTTTTGTTCCCTATGCCCT+GGG + chr1_3:46564226-46564245 Msa0121120:intron 45.0%
! TTTTTGTTCCCTATGCCCTG+GGG + chr1_3:46564227-46564246 Msa0121120:intron 45.0%
! GCATGCATTGTTTGTTGGGA+TGG + chr1_3:46564446-46564465 Msa0121120:CDS 45.0%
! TGCATTGTTTGTTGGGATGG+TGG + chr1_3:46564449-46564468 Msa0121120:CDS 45.0%
!! TGCCCAAGGGCATTTCATAA+AGG + chr1_3:46564494-46564513 Msa0121120:CDS 45.0%
ATCTAAGTGAGGGGTAACCT+TGG + chr1_3:46565130-46565149 Msa0121120:intron 45.0%
! GGTGTTGTCATGTGACTGAA+AGG + chr1_3:46565166-46565185 Msa0121120:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr1_3:46565172-46565191 Msa0121120:intron 45.0%
CAGCCTCTTGTGTCAAAAAC+AGG + chr1_3:46565211-46565230 Msa0121120:intron 45.0%
CAACACATGTTCCTTGGAGA+AGG + chr1_3:46565429-46565448 Msa0121120:CDS 45.0%
CACTATGCGAATGCATCTCT+TGG - chr1_3:46565526-46565545 None:intergenic 45.0%
!! AAAGACTTTGAAGCGGAGAC+TGG + chr1_3:46565546-46565565 Msa0121120:CDS 45.0%
GACTTCAGCAGATCAGGATT+TGG + chr1_3:46565686-46565705 Msa0121120:CDS 45.0%
GAAATTCCACTCAGCTGATC+TGG - chr1_3:46566251-46566270 None:intergenic 45.0%
CTAGAGCAGGTTCTCTTTGA+AGG + chr1_3:46566311-46566330 Msa0121120:intron 45.0%
!!! TTTTGGACTAGTGGTACTGC+AGG - chr1_3:46566352-46566371 None:intergenic 45.0%
!! GAGAGTGACTTTTGGACTAG+TGG - chr1_3:46566361-46566380 None:intergenic 45.0%
!! GAGAGTGTGAGAGTGACTTT+TGG - chr1_3:46566369-46566388 None:intergenic 45.0%
AAACAGAGGACCACAAATGG+AGG - chr1_3:46566391-46566410 None:intergenic 45.0%
CAGAAACAGAGGACCACAAA+TGG - chr1_3:46566394-46566413 None:intergenic 45.0%
CATTTGTGGTCCTCTGTTTC+TGG + chr1_3:46566392-46566411 Msa0121120:intron 45.0%
ATCCTGGAAACCAGAAACAG+AGG - chr1_3:46566405-46566424 None:intergenic 45.0%
GGACCTACTTTCTCTTTCTC+TGG + chr1_3:46566508-46566527 Msa0121120:intron 45.0%
GGTCTTCCTCTGTAGAACTT+TGG + chr1_3:46566581-46566600 Msa0121120:intron 45.0%
! GAACTTTGGTTTCTTGGCCA+AGG + chr1_3:46566595-46566614 Msa0121120:intron 45.0%
TCAGATGTTCCTCATAGCCT+TGG - chr1_3:46566615-46566634 None:intergenic 45.0%
!! GGCTCTAAAGTTCGTCAAGA+TGG - chr1_3:46566734-46566753 None:intergenic 45.0%
GTTCGTGATCAAGTCCTAAC+TGG + chr1_3:46567015-46567034 Msa0121120:intron 45.0%
TGTTGTTGAAGCTTCTGCCT+TGG + chr1_3:46567119-46567138 Msa0121120:intron 45.0%
AGATGAGCTTGGAGATTCCT+TGG - chr1_3:46567367-46567386 None:intergenic 45.0%
ACCTGGTTGCCCTTTCAATT+TGG + chr1_3:46567626-46567645 Msa0121120:intron 45.0%
ACCAAATTGAAAGGGCAACC+AGG - chr1_3:46567630-46567649 None:intergenic 45.0%
CGTTATACAGGAACGTGGTA+CGG + chr1_3:46567710-46567729 Msa0121120:intron 45.0%
GTTATACAGGAACGTGGTAC+GGG + chr1_3:46567711-46567730 Msa0121120:intron 45.0%
TCCTAGTCGTGTGTCTTCTA+TGG + chr1_3:46568013-46568032 Msa0121120:intron 45.0%
CCTAGTCGTGTGTCTTCTAT+GGG + chr1_3:46568014-46568033 Msa0121120:intron 45.0%
GGGGACAACTTATCTAAACC+TGG - chr1_3:46568530-46568549 None:intergenic 45.0%
AAACACACTTGATTGCTCGG+GGG - chr1_3:46568550-46568569 None:intergenic 45.0%
GGATACTCTAGGTTGCAGAA+AGG + chr1_3:46568575-46568594 Msa0121120:intron 45.0%
CGTCGTTGGTATGTAATGAG+TGG - chr1_3:46568821-46568840 None:intergenic 45.0%
GTGCCTTCCAATTCGGTATT+AGG - chr1_3:46568854-46568873 None:intergenic 45.0%
GGAGTAGGACATGATTCAGT+TGG - chr1_3:46568884-46568903 None:intergenic 45.0%
ACTGAATCATGTCCTACTCC+AGG + chr1_3:46568884-46568903 Msa0121120:intron 45.0%
CGTCAATCAGGTCTGTAGTA+GGG - chr1_3:46568916-46568935 None:intergenic 45.0%
TCGTCAATCAGGTCTGTAGT+AGG - chr1_3:46568917-46568936 None:intergenic 45.0%
CTAACCGCGATCGATAAATC+AGG - chr1_3:46568944-46568963 None:intergenic 45.0%
CTGATTTATCGATCGCGGTT+AGG + chr1_3:46568942-46568961 Msa0121120:intron 45.0%
TTATCGATCGCGGTTAGGAA+AGG + chr1_3:46568947-46568966 Msa0121120:intron 45.0%
TCGCGGTTAGGAAAGGTAAT+CGG + chr1_3:46568954-46568973 Msa0121120:intron 45.0%
!! ATGCAAGCTTTGGGGCATAA+TGG + chr1_3:46569136-46569155 Msa0121120:intron 45.0%
! TTTGGGGCATAATGGCACTT+GGG + chr1_3:46569144-46569163 Msa0121120:intron 45.0%
GCATAATGGCACTTGGGATT+TGG + chr1_3:46569150-46569169 Msa0121120:intron 45.0%
GTTTCTTTCCTGGAGGAAGA+GGG - chr1_3:46569177-46569196 None:intergenic 45.0%
CTCCAGGAAAGAAACCTGTT+GGG + chr1_3:46569182-46569201 Msa0121120:intron 45.0%
ATAACCTTTGGCCACCAAAC+GGG - chr1_3:46569266-46569285 None:intergenic 45.0%
TGGTGATACTTTCTCTCCTG+TGG + chr1_3:46569309-46569328 Msa0121120:intron 45.0%
! ATACAATGGCCAATGACGGA+TGG - chr1_3:46569374-46569393 None:intergenic 45.0%
ATTTCCCAAACCAAGCTCGT+GGG - chr1_3:46569537-46569556 None:intergenic 45.0%
AATTTCCCAAACCAAGCTCG+TGG - chr1_3:46569538-46569557 None:intergenic 45.0%
GTTTGGGAAATTCAGCTCAG+TGG + chr1_3:46569546-46569565 Msa0121120:intron 45.0%
GAAATTCAGCTCAGTGGTTC+AGG + chr1_3:46569552-46569571 Msa0121120:intron 45.0%
AGTTGCTCAGTCAATGAACG+GGG + chr1_3:46569780-46569799 Msa0121120:intron 45.0%
TAGACCAGTTGACAGTCCTA+TGG + chr1_3:46569864-46569883 Msa0121120:intron 45.0%
!! AGCCTTATTCCGATCCTGAA+AGG + chr1_3:46569920-46569939 Msa0121120:intron 45.0%
! ATTCCGATCCTGAAAGGTAC+CGG + chr1_3:46569926-46569945 Msa0121120:intron 45.0%
TGAGCTTTCCAACCAATCTC+CGG - chr1_3:46569948-46569967 None:intergenic 45.0%
TCATAAAGCAGTCCTTGTCC+TGG - chr1_3:46570096-46570115 None:intergenic 45.0%
! GGGTATTGTGTGTCTATTGG+AGG + chr1_3:46570195-46570214 Msa0121120:intron 45.0%
AAGCTATATGTAGGGCTGCT+TGG - chr1_3:46570389-46570408 None:intergenic 45.0%
CTATATGCTCCATCTTGAGG+GGG + chr1_3:46570597-46570616 Msa0121120:intron 45.0%
GAAATTCCACTCAGCTGATC+TGG - chr1_3:46566251-46566270 None:intergenic 45.0%
AATGAACAAGGAGGGGAAGA+GGG - chr1_3:46571010-46571029 None:intergenic 45.0%
ACACTGCAATGAACAAGGAG+GGG - chr1_3:46571017-46571036 None:intergenic 45.0%
CACACTGCAATGAACAAGGA+GGG - chr1_3:46571018-46571037 None:intergenic 45.0%
TCACACTGCAATGAACAAGG+AGG - chr1_3:46571019-46571038 None:intergenic 45.0%
CTGATCTCACCTTTGTCCAT+TGG + chr1_3:46571136-46571155 Msa0121120:intron 45.0%
TATTGCAGGAATTGCCGGAA+GGG + chr1_3:46571168-46571187 Msa0121120:intron 45.0%
GTTTCTCAGCTTCCCTAACT+AGG - chr1_3:46571247-46571266 None:intergenic 45.0%
AAGTTGCTTCTCCTGAAACC+AGG + chr1_3:46571366-46571385 Msa0121120:CDS 45.0%
TACAACACTTCTCCTCAAGC+TGG + chr1_3:46571862-46571881 Msa0121120:intron 45.0%
AAGATCAGCAAGGTTGCCTT+GGG + chr1_3:46571957-46571976 Msa0121120:intron 45.0%
AAGATCAGCAAGGTTGCCTT+GGG + chr1_3:46571957-46571976 Msa0121120:intron 45.0%
TTGCCTTGGGAAGAGACATA+TGG + chr1_3:46572040-46572059 Msa0121120:intron 45.0%
ACTCCATATGTCTCTTCCCA+AGG - chr1_3:46572046-46572065 None:intergenic 45.0%
CTCTGCTTCAGCACTAGATA+TGG + chr1_3:46572281-46572300 Msa0121120:intron 45.0%
TGACTATGCAGGGTCAATTG+TGG - chr1_3:46572383-46572402 None:intergenic 45.0%
! TTCGAACGGAATGGAAGTGT+GGG - chr1_3:46572427-46572446 None:intergenic 45.0%
GCATCCTGCAACTTCACATT+TGG + chr1_3:46572532-46572551 Msa0121120:intron 45.0%
GGATCAATTGTTGCACTTGC+AGG + chr1_3:46572553-46572572 Msa0121120:intron 45.0%
! AGTGACAGGTGATGATGAAG+AGG - chr1_3:46572744-46572763 None:intergenic 45.0%
ATGGGGTGTAGCAGTGTTAT+TGG - chr1_3:46572786-46572805 None:intergenic 45.0%
! GCAGTTTGTTCACCATATCC+AGG + chr1_3:46572954-46572973 Msa0121120:intron 45.0%
TCAGTAGCTGCGTCAACTAT+AGG - chr1_3:46573178-46573197 None:intergenic 45.0%
ACGTGACCTTATTCCTTCCA+TGG + chr1_3:46573198-46573217 Msa0121120:CDS 45.0%
! TTGCAGACTCAGGATTTTGG+AGG + chr1_3:46573328-46573347 Msa0121120:CDS 45.0%
AGTTCATCTGTGGTATCTGC+GGG + chr1_3:46573467-46573486 Msa0121120:intron 45.0%
AAGACACAAGAACCGTGGAA+AGG + chr1_3:46573541-46573560 Msa0121120:CDS 45.0%
AAGTTAGCAGTACAGTCCTC+AGG - chr1_3:46573572-46573591 None:intergenic 45.0%
TAAGAAGGGAAAGTGGTTGG+GGG - chr1_3:46573633-46573652 None:intergenic 45.0%
TAAAGTGGTCATGGTAAGGC+TGG + chr1_3:46573682-46573701 Msa0121120:intron 45.0%
AAAGTGGTCATGGTAAGGCT+GGG + chr1_3:46573683-46573702 Msa0121120:intron 45.0%
CATCGCTAAACACGTCCTAA+GGG - chr1_3:46573817-46573836 None:intergenic 45.0%
TCATCGCTAAACACGTCCTA+AGG - chr1_3:46573818-46573837 None:intergenic 45.0%
TGATCACTTATGCCTGTGTC+TGG + chr1_3:46574004-46574023 Msa0121120:intron 45.0%
GATCACTTATGCCTGTGTCT+GGG + chr1_3:46574005-46574024 Msa0121120:intron 45.0%
!!! GTACTCGGTCATTTTAGGGT+AGG - chr1_3:46574369-46574388 None:intergenic 45.0%
!! CGGTGTACTCGGTCATTTTA+GGG - chr1_3:46574373-46574392 None:intergenic 45.0%
!! ACGGTGTACTCGGTCATTTT+AGG - chr1_3:46574374-46574393 None:intergenic 45.0%
CTATGAATGATCCGACATCG+AGG - chr1_3:46574479-46574498 None:intergenic 45.0%
!! TATATCAAATAATAATATAA+AGG - chr1_3:46561438-46561457 None:intergenic 5.0%
!!! ATCTATTTTTTTTTTTTTTT+GGG + chr1_3:46566423-46566442 Msa0121120:intron 5.0%
AACTTCGTGCCCATGACGTT+GGG - chr1_3:46560408-46560427 None:intergenic 50.0%
TAACTTCGTGCCCATGACGT+TGG - chr1_3:46560409-46560428 None:intergenic 50.0%
GACTCACTGAGTCAAACTCG+TGG + chr1_3:46560453-46560472 Msa0121120:five_prime_UTR 50.0%
GAGAGAGAGTTTCGGAGAGA+GGG - chr1_3:46560515-46560534 None:intergenic 50.0%
!! GAGAGAGAGTAGGGTTTTGG+AGG - chr1_3:46560537-46560556 None:intergenic 50.0%
GGAGAGAGAGAGAGAGAGTA+GGG - chr1_3:46560546-46560565 None:intergenic 50.0%
TGGAGAGAGAGAGAGAGAGT+AGG - chr1_3:46560547-46560566 None:intergenic 50.0%
GTGAATCTGAAGAAGAGGGG+GGG - chr1_3:46560607-46560626 None:intergenic 50.0%
GGTGAATCTGAAGAAGAGGG+GGG - chr1_3:46560608-46560627 None:intergenic 50.0%
GGGAGGTGAATCTGAAGAAG+AGG - chr1_3:46560612-46560631 None:intergenic 50.0%
! TGCATGAGTCGGTTTCCATG+GGG - chr1_3:46560633-46560652 None:intergenic 50.0%
! CTTGCATGAGTCGGTTTCCA+TGG - chr1_3:46560635-46560654 None:intergenic 50.0%
! GGTGAAGATGTTTCTGCTGC+TGG + chr1_3:46560841-46560860 Msa0121120:CDS 50.0%
!! ACGAAACGGTTGGTGAGAAG+TGG + chr1_3:46560899-46560918 Msa0121120:CDS 50.0%
!! TAAAGACGTGTCTCGGTGTC+TGG + chr1_3:46561131-46561150 Msa0121120:intron 50.0%
CATGCCTTCTAGTGCTACAC+AGG - chr1_3:46561519-46561538 None:intergenic 50.0%
TGGTGCTTGACACTGACATG+TGG + chr1_3:46561558-46561577 Msa0121120:intron 50.0%
AGATTGGAGGGAGTGATTGC+TGG + chr1_3:46561723-46561742 Msa0121120:CDS 50.0%
TGCTCATGCTGTCTGTGCAA+TGG + chr1_3:46561759-46561778 Msa0121120:CDS 50.0%
!! GGGTAGATAGCGGGTACTAA+TGG - chr1_3:46561837-46561856 None:intergenic 50.0%
AGACCACTAGGGTAGATAGC+GGG - chr1_3:46561846-46561865 None:intergenic 50.0%
GAGACCACTAGGGTAGATAG+CGG - chr1_3:46561847-46561866 None:intergenic 50.0%
GAGGGGGGAATAATCTACAC+AGG - chr1_3:46561912-46561931 None:intergenic 50.0%
TGAATCTCAAACGTGGAGGG+GGG - chr1_3:46561927-46561946 None:intergenic 50.0%
GGCATGAATCTCAAACGTGG+AGG - chr1_3:46561931-46561950 None:intergenic 50.0%
GGTGGCTTCCATAGAATGTG+AGG - chr1_3:46562042-46562061 None:intergenic 50.0%
TTTACTTGCAGGAGCTGCAG+AGG + chr1_3:46562101-46562120 Msa0121120:CDS 50.0%
GAAACAGGGAAAGCCCCTAT+GGG - chr1_3:46562298-46562317 None:intergenic 50.0%
TGAAACAGGGAAAGCCCCTA+TGG - chr1_3:46562299-46562318 None:intergenic 50.0%
TGCTTGCTTCCACGCAAGAA+TGG - chr1_3:46562348-46562367 None:intergenic 50.0%
GACAGTCCTATTCGTGGAGT+TGG + chr1_3:46562376-46562395 Msa0121120:CDS 50.0%
GTGGAGTTGGCAAAAGAGTC+AGG + chr1_3:46562389-46562408 Msa0121120:CDS 50.0%
TGAGCGTTTGAGTGTGCGTT+TGG + chr1_3:46562450-46562469 Msa0121120:intron 50.0%
ATGAGCGTACGAAAGGTGAC+AGG + chr1_3:46562484-46562503 Msa0121120:intron 50.0%
GAACAAGGGGAGCCACAATT+AGG - chr1_3:46562604-46562623 None:intergenic 50.0%
TTGTGGCTCCCCTTGTTCTT+CGG + chr1_3:46562606-46562625 Msa0121120:intron 50.0%
TACGTGAGCCGAAGAACAAG+GGG - chr1_3:46562617-46562636 None:intergenic 50.0%
CATACGTGAGCCGAAGAACA+AGG - chr1_3:46562619-46562638 None:intergenic 50.0%
AACCACCGCCTCCAAATACT+TGG - chr1_3:46562642-46562661 None:intergenic 50.0%
AAGTATTTGGAGGCGGTGGT+TGG + chr1_3:46562641-46562660 Msa0121120:intron 50.0%
!! CTGCTGGCTTGCTATTTGAC+TGG + chr1_3:46563026-46563045 Msa0121120:intron 50.0%
!! AGCCACAGAAGCACTCTTCT+TGG - chr1_3:46563467-46563486 None:intergenic 50.0%
!! GACGAAGATGGATTGCCTGA+TGG + chr1_3:46563882-46563901 Msa0121120:CDS 50.0%
AGCTTATTATGCACGTGGGC+AGG + chr1_3:46563914-46563933 Msa0121120:CDS 50.0%
CATGAACCTCAAACTGTGCG+GGG - chr1_3:46564172-46564191 None:intergenic 50.0%
GCATGAACCTCAAACTGTGC+GGG - chr1_3:46564173-46564192 None:intergenic 50.0%
! GCACAGTTTGAGGTTCATGC+AGG + chr1_3:46564173-46564192 Msa0121120:CDS 50.0%
! AGTTTGAGGTTCATGCAGGG+TGG + chr1_3:46564177-46564196 Msa0121120:CDS 50.0%
! GTTTGAGGTTCATGCAGGGT+GGG + chr1_3:46564178-46564197 Msa0121120:CDS 50.0%
!! TTCTCTGTGATGGATGCCCA+AGG + chr1_3:46564480-46564499 Msa0121120:CDS 50.0%
!! TCTCTGTGATGGATGCCCAA+GGG + chr1_3:46564481-46564500 Msa0121120:CDS 50.0%
!! GTATCCCCTTGGTAGCGTAT+AGG + chr1_3:46564676-46564695 Msa0121120:intron 50.0%
AACCTTGGCGCAACTGGTAA+AGG + chr1_3:46565145-46565164 Msa0121120:intron 50.0%
AAGGTCACGGATTCAAGTCC+TGG + chr1_3:46565185-46565204 Msa0121120:intron 50.0%
! TGACACAAGAGGCTGTTTCC+AGG - chr1_3:46565206-46565225 None:intergenic 50.0%
! ATGCGGCAGCTTTAGTACAC+CGG + chr1_3:46565289-46565308 Msa0121120:intron 50.0%
GTATCAAGTACTCCACGACG+TGG + chr1_3:46565387-46565406 Msa0121120:CDS 50.0%
GTTCCTTGGAGAAGGATCTG+TGG + chr1_3:46565437-46565456 Msa0121120:CDS 50.0%
! CTGGTGGATGTGCTTTATGC+AGG + chr1_3:46565565-46565584 Msa0121120:CDS 50.0%
! GGTTCTGACTTCAGCAGATC+AGG + chr1_3:46565680-46565699 Msa0121120:CDS 50.0%
CTCACACTCTCCTCCATTTG+TGG + chr1_3:46566378-46566397 Msa0121120:intron 50.0%
!! GTCCTCTGTTTCTGGTTTCC+AGG + chr1_3:46566400-46566419 Msa0121120:intron 50.0%
! GCTTTTCTCACAATGGCCTC+AGG + chr1_3:46566469-46566488 Msa0121120:intron 50.0%
GTTTCTTGGCCAAGGCTATG+AGG + chr1_3:46566603-46566622 Msa0121120:intron 50.0%
! TTGCCACTCTTTCTGGCAGA+AGG + chr1_3:46566762-46566781 Msa0121120:intron 50.0%
CTCTACCGCAGATTGAGCTT+TGG - chr1_3:46566887-46566906 None:intergenic 50.0%
CAAAGCTCAATCTGCGGTAG+AGG + chr1_3:46566885-46566904 Msa0121120:intron 50.0%
! TTTTAGGCGAAGGGACTCGA+AGG - chr1_3:46567080-46567099 None:intergenic 50.0%
!! CCTTGGCAGCTTTTAGCTGA+AGG - chr1_3:46567350-46567369 None:intergenic 50.0%
CCTTCAGCTAAAAGCTGCCA+AGG + chr1_3:46567347-46567366 Msa0121120:intron 50.0%
GCAACTACAGCAGATGAGCT+TGG - chr1_3:46567378-46567397 None:intergenic 50.0%
CCCATAGAAGACACACGACT+AGG - chr1_3:46568017-46568036 None:intergenic 50.0%
! CCATTCTGTTGAGGGGTATG+AGG - chr1_3:46568269-46568288 None:intergenic 50.0%
CCTCATACCCCTCAACAGAA+TGG + chr1_3:46568266-46568285 Msa0121120:intron 50.0%
AACACACTTGATTGCTCGGG+GGG - chr1_3:46568549-46568568 None:intergenic 50.0%
TGCAGGTGGAGGAATAACTG+GGG - chr1_3:46568786-46568805 None:intergenic 50.0%
GTGCAGGTGGAGGAATAACT+GGG - chr1_3:46568787-46568806 None:intergenic 50.0%
AGTGGTCTATGAGATGGTGC+AGG - chr1_3:46568803-46568822 None:intergenic 50.0%
TAGGAACATGTGGTCGTCGT+TGG - chr1_3:46568835-46568854 None:intergenic 50.0%
! TGTGAGGCACTTGATCATCC+AGG + chr1_3:46569088-46569107 Msa0121120:intron 50.0%
AGGCACTTGATCATCCAGGA+TGG + chr1_3:46569092-46569111 Msa0121120:intron 50.0%
!! CTTTGGGGCATAATGGCACT+TGG + chr1_3:46569143-46569162 Msa0121120:intron 50.0%
GGTTTCTTTCCTGGAGGAAG+AGG - chr1_3:46569178-46569197 None:intergenic 50.0%
CCAACAGGTTTCTTTCCTGG+AGG - chr1_3:46569184-46569203 None:intergenic 50.0%
CCTCCAGGAAAGAAACCTGT+TGG + chr1_3:46569181-46569200 Msa0121120:intron 50.0%
CACCCAACAGGTTTCTTTCC+TGG - chr1_3:46569187-46569206 None:intergenic 50.0%
!! AGAAACCTGTTGGGTGTCGA+TGG + chr1_3:46569191-46569210 Msa0121120:intron 50.0%
!! GAAACCTGTTGGGTGTCGAT+GGG + chr1_3:46569192-46569211 Msa0121120:intron 50.0%
TGATCGTCTCAAAGCCCGTT+TGG + chr1_3:46569249-46569268 Msa0121120:intron 50.0%
!! ACCACCTGGATTTGTTGCTC+AGG + chr1_3:46569456-46569475 Msa0121120:intron 50.0%
!! CCACCTGGATTTGTTGCTCA+GGG + chr1_3:46569457-46569476 Msa0121120:intron 50.0%
!! CACCTGGATTTGTTGCTCAG+GGG + chr1_3:46569458-46569477 Msa0121120:intron 50.0%
!! ACCTGGATTTGTTGCTCAGG+GGG + chr1_3:46569459-46569478 Msa0121120:intron 50.0%
AAATTGCGGCGCTCTCTCTA+TGG + chr1_3:46569499-46569518 Msa0121120:intron 50.0%
AATTGCGGCGCTCTCTCTAT+GGG + chr1_3:46569500-46569519 Msa0121120:intron 50.0%
TCAAACAATCCCCACGAGCT+TGG + chr1_3:46569524-46569543 Msa0121120:intron 50.0%
AATCCCCACGAGCTTGGTTT+GGG + chr1_3:46569530-46569549 Msa0121120:intron 50.0%
TTTCCCAAACCAAGCTCGTG+GGG - chr1_3:46569536-46569555 None:intergenic 50.0%
! AGCTCAGTGGTTCAGGCTTT+TGG + chr1_3:46569559-46569578 Msa0121120:intron 50.0%
GGATCCATAGGACTGTCAAC+TGG - chr1_3:46569871-46569890 None:intergenic 50.0%
GAATAAGGCTCCCCTTGGTT+GGG - chr1_3:46569910-46569929 None:intergenic 50.0%
TCTCCGGTACCTTTCAGGAT+CGG - chr1_3:46569932-46569951 None:intergenic 50.0%
!! TCCTGAAAGGTACCGGAGAT+TGG + chr1_3:46569933-46569952 Msa0121120:intron 50.0%
ACCAATCTCCGGTACCTTTC+AGG - chr1_3:46569937-46569956 None:intergenic 50.0%
!! GAAAGGTACCGGAGATTGGT+TGG + chr1_3:46569937-46569956 Msa0121120:intron 50.0%
! TTTTGCGATGCAGATTGGGC+AGG + chr1_3:46570144-46570163 Msa0121120:intron 50.0%
GAAGTAGAACGCCTGTCGAT+GGG - chr1_3:46570174-46570193 None:intergenic 50.0%
TGAAGTAGAACGCCTGTCGA+TGG - chr1_3:46570175-46570194 None:intergenic 50.0%
ATCGACAGGCGTTCTACTTC+AGG + chr1_3:46570174-46570193 Msa0121120:intron 50.0%
TCGACAGGCGTTCTACTTCA+GGG + chr1_3:46570175-46570194 Msa0121120:intron 50.0%
TTGAATTCGCGGTCCCCTTA+AGG - chr1_3:46570547-46570566 None:intergenic 50.0%
CAATGAACAAGGAGGGGAAG+AGG - chr1_3:46571011-46571030 None:intergenic 50.0%
GTATTGCAGGAATTGCCGGA+AGG + chr1_3:46571167-46571186 Msa0121120:intron 50.0%
ATTGCAGGAATTGCCGGAAG+GGG + chr1_3:46571169-46571188 Msa0121120:intron 50.0%
TCTCAGCTTCCCTAACTAGG+AGG - chr1_3:46571244-46571263 None:intergenic 50.0%
AAAAGCAACGGCCTGGTTTC+AGG - chr1_3:46571380-46571399 None:intergenic 50.0%
!! TGAAACCAGGCCGTTGCTTT+TGG + chr1_3:46571379-46571398 Msa0121120:CDS 50.0%
GAAGATCAGCAAGGTTGCCT+TGG + chr1_3:46571956-46571975 Msa0121120:intron 50.0%
GAAGATCAGCAAGGTTGCCT+TGG + chr1_3:46571956-46571975 Msa0121120:intron 50.0%
AGGGCAATGGCAAAAGGGAT+AGG - chr1_3:46572258-46572277 None:intergenic 50.0%
! TATCCCTTTTGCCATTGCCC+TGG + chr1_3:46572257-46572276 Msa0121120:intron 50.0%
AGTCCAGGGCAATGGCAAAA+GGG - chr1_3:46572263-46572282 None:intergenic 50.0%
! TAGTGCTGAAGCAGAGTCCA+GGG - chr1_3:46572277-46572296 None:intergenic 50.0%
TGGCTGGGAATCTTGTGACT+TGG - chr1_3:46572327-46572346 None:intergenic 50.0%
AAGTCACAAGATTCCCAGCC+AGG + chr1_3:46572326-46572345 Msa0121120:intron 50.0%
GATATTGCACCTTCCTGGCT+GGG - chr1_3:46572342-46572361 None:intergenic 50.0%
GTTCGAACGGAATGGAAGTG+TGG - chr1_3:46572428-46572447 None:intergenic 50.0%
! GAAGTGGCCCACTCTAAGAA+AGG - chr1_3:46572646-46572665 None:intergenic 50.0%
GAAGAGGAGCAACAACTGCT+GGG - chr1_3:46572728-46572747 None:intergenic 50.0%
TGAAGAGGAGCAACAACTGC+TGG - chr1_3:46572729-46572748 None:intergenic 50.0%
CATGCTTTGTCCCCTGGATA+TGG - chr1_3:46572969-46572988 None:intergenic 50.0%
AAGCATGCACTGGGATCATG+CGG + chr1_3:46572982-46573001 Msa0121120:intron 50.0%
CAGACGGAATTTGCAGACTC+AGG + chr1_3:46573318-46573337 Msa0121120:intron 50.0%
!! CTGGCCTTGAAGTTCATCTG+TGG + chr1_3:46573457-46573476 Msa0121120:intron 50.0%
GCTACAAGACACAAGAACCG+TGG + chr1_3:46573536-46573555 Msa0121120:CDS 50.0%
ACAAGAACCGTGGAAAGGTG+AGG + chr1_3:46573546-46573565 Msa0121120:intron 50.0%
AAGTGGTCATGGTAAGGCTG+GGG + chr1_3:46573684-46573703 Msa0121120:intron 50.0%
AGAGTTCACTACCCAGACAC+AGG - chr1_3:46574019-46574038 None:intergenic 50.0%
GTTTGGAAGTAGCCCTGTTC+AGG - chr1_3:46574061-46574080 None:intergenic 50.0%
GTTCTCGTGCATTGAAAGGC+TGG + chr1_3:46574084-46574103 Msa0121120:CDS 50.0%
CTTCAGCAGCTGGTAACACA+AGG - chr1_3:46574132-46574151 None:intergenic 50.0%
GATTCTGCTTCTTCAGCAGC+TGG - chr1_3:46574142-46574161 None:intergenic 50.0%
! GTTGGTAAGCTGCAGCACAA+CGG - chr1_3:46574393-46574412 None:intergenic 50.0%
! ACAAATCGGTGCCTCGATGT+CGG + chr1_3:46574465-46574484 Msa0121120:CDS 50.0%
GGAGAGAGAGTTTCGGAGAG+AGG - chr1_3:46560516-46560535 None:intergenic 55.0%
CTTCAGATTCACCTCCCCCA+TGG + chr1_3:46560615-46560634 Msa0121120:exon 55.0%
! GCATGAGTCGGTTTCCATGG+GGG - chr1_3:46560632-46560651 None:intergenic 55.0%
CGCACCTGTGTAGCACTAGA+AGG + chr1_3:46561512-46561531 Msa0121120:intron 55.0%
TTGGAGGGAGTGATTGCTGG+TGG + chr1_3:46561726-46561745 Msa0121120:CDS 55.0%
TGGAGGGAGTGATTGCTGGT+GGG + chr1_3:46561727-46561746 Msa0121120:CDS 55.0%
GTACCCGCTATCTACCCTAG+TGG + chr1_3:46561840-46561859 Msa0121120:intron 55.0%
! GCTATTGGGAGTATGCAGGG+CGG + chr1_3:46562013-46562032 Msa0121120:CDS 55.0%
TGCCAAGTATTTGGAGGCGG+TGG + chr1_3:46562637-46562656 Msa0121120:intron 55.0%
! TGGGGTGTCTCTCCATGAGT+TGG + chr1_3:46564373-46564392 Msa0121120:CDS 55.0%
CACCTTTACCAGTTGCGCCA+AGG - chr1_3:46565150-46565169 None:intergenic 55.0%
! GGAAGGGGTCCCACCATTTT+TGG - chr1_3:46565257-46565276 None:intergenic 55.0%
! AAAATGGTGGGACCCCTTCC+CGG + chr1_3:46565257-46565276 Msa0121120:intron 55.0%
CTAAAGCTGCCGCATACGCA+GGG - chr1_3:46565284-46565303 None:intergenic 55.0%
ACTAAAGCTGCCGCATACGC+AGG - chr1_3:46565285-46565304 None:intergenic 55.0%
! TGCGGCAGCTTTAGTACACC+GGG + chr1_3:46565290-46565309 Msa0121120:intron 55.0%
CAAGTACTCCACGACGTGGT+CGG + chr1_3:46565391-46565410 Msa0121120:CDS 55.0%
GAGCCACAGATCCTTCTCCA+AGG - chr1_3:46565443-46565462 None:intergenic 55.0%
GGCTCTCAATCCTGATGCTG+TGG + chr1_3:46565458-46565477 Msa0121120:CDS 55.0%
AATCCTGATGCTGTGGCAGC+TGG + chr1_3:46565465-46565484 Msa0121120:CDS 55.0%
TGATGCTGTGGCAGCTGGAA+GGG + chr1_3:46565470-46565489 Msa0121120:CDS 55.0%
!! GACTTTGAAGCGGAGACTGG+TGG + chr1_3:46565549-46565568 Msa0121120:CDS 55.0%
! CTTTGAAGGGTCACTGCCTC+TGG + chr1_3:46566325-46566344 Msa0121120:intron 55.0%
TAGTGGTACTGCAGGACCAG+AGG - chr1_3:46566344-46566363 None:intergenic 55.0%
GAGCCTTCTGCCAGAAAGAG+TGG - chr1_3:46566768-46566787 None:intergenic 55.0%
TCTGCCTTGGTTTCCAACCG+AGG + chr1_3:46567132-46567151 Msa0121120:intron 55.0%
CTGCCTTGGTTTCCAACCGA+GGG + chr1_3:46567133-46567152 Msa0121120:intron 55.0%
TGCCTTGGTTTCCAACCGAG+GGG + chr1_3:46567134-46567153 Msa0121120:intron 55.0%
GGTGCCTCTGATCACATTGC+TGG + chr1_3:46567462-46567481 Msa0121120:intron 55.0%
TACAGGAACGTGGTACGGGT+CGG + chr1_3:46567715-46567734 Msa0121120:intron 55.0%
GGCGCAGGACATGAATCACA+TGG + chr1_3:46567744-46567763 Msa0121120:intron 55.0%
GACATCTCGTTGAGACTGCC+CGG + chr1_3:46568309-46568328 Msa0121120:intron 55.0%
GGTGCAGGTGGAGGAATAAC+TGG - chr1_3:46568788-46568807 None:intergenic 55.0%
CTATGAGATGGTGCAGGTGG+AGG - chr1_3:46568797-46568816 None:intergenic 55.0%
GGTCTATGAGATGGTGCAGG+TGG - chr1_3:46568800-46568819 None:intergenic 55.0%
TCTGTAGTAGGGTTGACGCC+TGG - chr1_3:46568905-46568924 None:intergenic 55.0%
! ATCATGGCTTGTCGCCATCC+TGG - chr1_3:46569109-46569128 None:intergenic 55.0%
! GATTTGGTCCCTCTTCCTCC+AGG + chr1_3:46569166-46569185 Msa0121120:intron 55.0%
TAGACCCATCGACACCCAAC+AGG - chr1_3:46569199-46569218 None:intergenic 55.0%
TCGTCTCAAAGCCCGTTTGG+TGG + chr1_3:46569252-46569271 Msa0121120:intron 55.0%
! AAAGCCCGTTTGGTGGCCAA+AGG + chr1_3:46569259-46569278 Msa0121120:intron 55.0%
!! CCAATGACGGATGGCAGCTA+TGG - chr1_3:46569365-46569384 None:intergenic 55.0%
CCATAGCTGCCATCCGTCAT+TGG + chr1_3:46569362-46569381 Msa0121120:intron 55.0%
CCCTGAGCAACAAATCCAGG+TGG - chr1_3:46569460-46569479 None:intergenic 55.0%
TCCCCCTGAGCAACAAATCC+AGG - chr1_3:46569463-46569482 None:intergenic 55.0%
TTGTTGCTCAGGGGGAGTCT+AGG + chr1_3:46569467-46569486 Msa0121120:intron 55.0%
CAATCCCCACGAGCTTGGTT+TGG + chr1_3:46569529-46569548 Msa0121120:intron 55.0%
GGAATAAGGCTCCCCTTGGT+TGG - chr1_3:46569911-46569930 None:intergenic 55.0%
GATCGGAATAAGGCTCCCCT+TGG - chr1_3:46569915-46569934 None:intergenic 55.0%
TGTTGCCAGGTCTAGTGCAG+AGG + chr1_3:46570254-46570273 Msa0121120:intron 55.0%
TTCAGCCTCTGCACTAGACC+TGG - chr1_3:46570262-46570281 None:intergenic 55.0%
! TCCATCTTGAGGGGGAGTGT+TGG + chr1_3:46570605-46570624 Msa0121120:intron 55.0%
TCCAACACTCCCCCTCAAGA+TGG - chr1_3:46570609-46570628 None:intergenic 55.0%
CAAGGAGGGGAAGAGGGTTA+AGG - chr1_3:46571004-46571023 None:intergenic 55.0%
CAACAAAGCCAGTCCCCTTC+CGG - chr1_3:46571185-46571204 None:intergenic 55.0%
!!! AACCAGGCCGTTGCTTTTGG+AGG + chr1_3:46571382-46571401 Msa0121120:CDS 55.0%
GACAGGGCCTCCAAAAGCAA+CGG - chr1_3:46571392-46571411 None:intergenic 55.0%
TCAGCAAGGTTGCCTTGGGT+TGG + chr1_3:46571961-46571980 Msa0121120:intron 55.0%
GAGTCCAGGGCAATGGCAAA+AGG - chr1_3:46572264-46572283 None:intergenic 55.0%
TGAAGCAGAGTCCAGGGCAA+TGG - chr1_3:46572271-46572290 None:intergenic 55.0%
! CTAGTGCTGAAGCAGAGTCC+AGG - chr1_3:46572278-46572297 None:intergenic 55.0%
CACAAGATTCCCAGCCAGGA+AGG + chr1_3:46572330-46572349 Msa0121120:intron 55.0%
GGATATTGCACCTTCCTGGC+TGG - chr1_3:46572343-46572362 None:intergenic 55.0%
CAGGGGACAAAGCATGCACT+GGG + chr1_3:46572973-46572992 Msa0121120:intron 55.0%
TGGTATCTGCGGGCATGCTA+CGG + chr1_3:46573477-46573496 Msa0121120:CDS 55.0%
! GCGGGCATGCTACGGATTTT+TGG + chr1_3:46573485-46573504 Msa0121120:CDS 55.0%
TGGGGGCAGTGACATATTGG+TGG - chr1_3:46573616-46573635 None:intergenic 55.0%
GGTTGGGGGCAGTGACATAT+TGG - chr1_3:46573619-46573638 None:intergenic 55.0%
CTCGTGCATTGAAAGGCTGG+TGG + chr1_3:46574087-46574106 Msa0121120:CDS 55.0%
TAGCAGGACGAAACCTGAGC+AGG + chr1_3:46574186-46574205 Msa0121120:CDS 55.0%
CTGCAGCACAACGGTGTACT+CGG - chr1_3:46574384-46574403 None:intergenic 55.0%
! TGAGTCGGTTTCCATGGGGG+AGG - chr1_3:46560629-46560648 None:intergenic 60.0%
GGACTTCGAAACGGCAACGG+CGG + chr1_3:46560791-46560810 Msa0121120:CDS 60.0%
GGAGGGAGTGATTGCTGGTG+GGG + chr1_3:46561728-46561747 Msa0121120:CDS 60.0%
GAGGGAGTGATTGCTGGTGG+GGG + chr1_3:46561729-46561748 Msa0121120:CDS 60.0%
AGGGAGTGATTGCTGGTGGG+GGG + chr1_3:46561730-46561749 Msa0121120:CDS 60.0%
GGCGGCTCCCTCACATTCTA+TGG + chr1_3:46562031-46562050 Msa0121120:CDS 60.0%
GATCAGCCCCGCACAGTTTG+AGG + chr1_3:46564163-46564182 Msa0121120:intron 60.0%
TGTTCCCTATGCCCTGGGGT+TGG + chr1_3:46564231-46564250 Msa0121120:intron 60.0%
GTTCCCTATGCCCTGGGGTT+GGG + chr1_3:46564232-46564251 Msa0121120:intron 60.0%
TTCCCTATGCCCTGGGGTTG+GGG + chr1_3:46564233-46564252 Msa0121120:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr1_3:46565139-46565158 Msa0121120:intron 60.0%
CTTCCAGCTGCCACAGCATC+AGG - chr1_3:46565471-46565490 None:intergenic 60.0%
CTGATGCTGTGGCAGCTGGA+AGG + chr1_3:46565469-46565488 Msa0121120:CDS 60.0%
GTGGCAGCTGGAAGGGTTGA+AGG + chr1_3:46565477-46565496 Msa0121120:CDS 60.0%
GACAACGTGTAGAAGGCCCC+AGG + chr1_3:46565765-46565784 Msa0121120:intron 60.0%
GCCTTGGTTTCCAACCGAGG+GGG + chr1_3:46567135-46567154 Msa0121120:intron 60.0%
TCCCCCTCGGTTGGAAACCA+AGG - chr1_3:46567139-46567158 None:intergenic 60.0%
CTCGTCCTCCACGACTTCCA+CGG - chr1_3:46567170-46567189 None:intergenic 60.0%
GTAGGGTTGACGCCTGGAGT+AGG - chr1_3:46568899-46568918 None:intergenic 60.0%
TGCTCAGGGGGAGTCTAGGT+TGG + chr1_3:46569471-46569490 Msa0121120:intron 60.0%
AGGAATTGCCGGAAGGGGAC+TGG + chr1_3:46571174-46571193 Msa0121120:intron 60.0%
CCAGTGCATGCTTTGTCCCC+TGG - chr1_3:46572975-46572994 None:intergenic 60.0%
CCAGGGGACAAAGCATGCAC+TGG + chr1_3:46572972-46572991 Msa0121120:intron 60.0%
TGCACTGGGATCATGCGGAG+TGG + chr1_3:46572987-46573006 Msa0121120:intron 60.0%
CCTCAGGCCTCACCTTTCCA+CGG - chr1_3:46573556-46573575 None:intergenic 60.0%
GCAACGGCGGCCGTCGTTTA+AGG + chr1_3:46560804-46560823 Msa0121120:CDS 65.0%
! ATGCAGGGTGGGCTTCTCGC+AGG + chr1_3:46564189-46564208 Msa0121120:CDS 65.0%
TCCCTATGCCCTGGGGTTGG+GGG + chr1_3:46564234-46564253 Msa0121120:intron 65.0%
TGGGGGGGTCATGGCTGTGT+TGG + chr1_3:46564251-46564270 Msa0121120:intron 65.0%
GGGGGTCATGGCTGTGTTGG+AGG + chr1_3:46564254-46564273 Msa0121120:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_3:46565272-46565291 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_3:46565273-46565292 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_3:46565272-46565291 Msa0121120:intron 65.0%
!! GGACAGTACCGACCACGTCG+TGG - chr1_3:46565402-46565421 None:intergenic 65.0%
GTTTCCAACCGAGGGGGACG+AGG + chr1_3:46567141-46567160 Msa0121120:intron 65.0%
CGTGGAAGTCGTGGAGGACG+AGG + chr1_3:46567168-46567187 Msa0121120:intron 65.0%
GGAAGTCGTGGAGGACGAGG+TGG + chr1_3:46567171-46567190 Msa0121120:intron 65.0%
CGTGGAGGACGAGGTGGAAG+AGG + chr1_3:46567177-46567196 Msa0121120:intron 65.0%
GGAGGACGAGGTGGAAGAGG+AGG + chr1_3:46567180-46567199 Msa0121120:intron 65.0%
CGTGGTACGGGTCGGACGAT+TGG + chr1_3:46567723-46567742 Msa0121120:intron 65.0%
GGGCAGGTTCACCCATCGAC+AGG + chr1_3:46570160-46570179 Msa0121120:intron 65.0%
GGCCTCCAAAAGCAACGGCC+TGG - chr1_3:46571387-46571406 None:intergenic 65.0%
GCTGGGCCACCACTTAGCCA+AGG - chr1_3:46572711-46572730 None:intergenic 65.0%
CCGTGGAAAGGTGAGGCCTG+AGG + chr1_3:46573553-46573572 Msa0121120:intron 65.0%
CCCCCCAACCCCAGGGCATA+GGG - chr1_3:46564238-46564257 None:intergenic 70.0%
CCCTATGCCCTGGGGTTGGG+GGG + chr1_3:46564235-46564254 Msa0121120:intron 70.0%
CCTATGCCCTGGGGTTGGGG+GGG + chr1_3:46564236-46564255 Msa0121120:intron 70.0%
CCATGACCCCCCCAACCCCA+GGG - chr1_3:46564245-46564264 None:intergenic 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_3:46565274-46565293 None:intergenic 70.0%
CTGCCGCATACGCAGGGTCC+GGG - chr1_3:46565278-46565297 None:intergenic 70.0%
GCTGCCGCATACGCAGGGTC+CGG - chr1_3:46565279-46565298 None:intergenic 70.0%
TCCAACCGAGGGGGACGAGG+AGG + chr1_3:46567144-46567163 Msa0121120:intron 70.0%
CGAGGAGGCCGTGGAAGTCG+TGG + chr1_3:46567159-46567178 Msa0121120:intron 70.0%
GGAGGCCGTGGAAGTCGTGG+AGG + chr1_3:46567162-46567181 Msa0121120:intron 70.0%
ACGGGTCGGACGATTGGCGC+AGG + chr1_3:46567729-46567748 Msa0121120:intron 70.0%
CCCCCCCAACCCCAGGGCAT+AGG - chr1_3:46564239-46564258 None:intergenic 75.0%
CCCTGGGGTTGGGGGGGTCA+TGG + chr1_3:46564242-46564261 Msa0121120:intron 75.0%
GCCATGACCCCCCCAACCCC+AGG - chr1_3:46564246-46564265 None:intergenic 75.0%
GCCTCCTCGTCCCCCTCGGT+TGG - chr1_3:46567148-46567167 None:intergenic 75.0%
CACGGCCTCCTCGTCCCCCT+CGG - chr1_3:46567152-46567171 None:intergenic 75.0%
! CGAGGGGGACGAGGAGGCCG+TGG + chr1_3:46567150-46567169 Msa0121120:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 46560366 46574498 46560366 ID=Msa0121120;Name=Msa0121120
chr1_3 mRNA 46560366 46574498 46560366 ID=Msa0121120-mRNA-1;Parent=Msa0121120;Name=Msa0121120-mRNA-1;_AED=0.20;_eAED=0.22;_QI=268|0.94|0.95|1|0.94|0.95|20|0|804
chr1_3 exon 46560366 46560996 46560366 ID=Msa0121120-mRNA-1:exon:14029;Parent=Msa0121120-mRNA-1
chr1_3 exon 46561711 46561788 46561711 ID=Msa0121120-mRNA-1:exon:14030;Parent=Msa0121120-mRNA-1
chr1_3 exon 46561918 46562122 46561918 ID=Msa0121120-mRNA-1:exon:14031;Parent=Msa0121120-mRNA-1
chr1_3 exon 46562302 46562410 46562302 ID=Msa0121120-mRNA-1:exon:14032;Parent=Msa0121120-mRNA-1
chr1_3 exon 46563227 46563319 46563227 ID=Msa0121120-mRNA-1:exon:14033;Parent=Msa0121120-mRNA-1
chr1_3 exon 46563432 46563527 46563432 ID=Msa0121120-mRNA-1:exon:14034;Parent=Msa0121120-mRNA-1
chr1_3 exon 46563644 46563742 46563644 ID=Msa0121120-mRNA-1:exon:14035;Parent=Msa0121120-mRNA-1
chr1_3 exon 46563854 46563935 46563854 ID=Msa0121120-mRNA-1:exon:14036;Parent=Msa0121120-mRNA-1
chr1_3 exon 46564012 46564071 46564012 ID=Msa0121120-mRNA-1:exon:14037;Parent=Msa0121120-mRNA-1
chr1_3 exon 46564164 46564216 46564164 ID=Msa0121120-mRNA-1:exon:14038;Parent=Msa0121120-mRNA-1
chr1_3 exon 46564349 46564515 46564349 ID=Msa0121120-mRNA-1:exon:14039;Parent=Msa0121120-mRNA-1
chr1_3 exon 46565376 46565586 46565376 ID=Msa0121120-mRNA-1:exon:14040;Parent=Msa0121120-mRNA-1
chr1_3 exon 46565679 46565736 46565679 ID=Msa0121120-mRNA-1:exon:14041;Parent=Msa0121120-mRNA-1
chr1_3 exon 46571034 46571090 46571034 ID=Msa0121120-mRNA-1:exon:14042;Parent=Msa0121120-mRNA-1
chr1_3 exon 46571176 46571421 46571176 ID=Msa0121120-mRNA-1:exon:14043;Parent=Msa0121120-mRNA-1
chr1_3 exon 46573163 46573227 46573163 ID=Msa0121120-mRNA-1:exon:14044;Parent=Msa0121120-mRNA-1
chr1_3 exon 46573321 46573377 46573321 ID=Msa0121120-mRNA-1:exon:14045;Parent=Msa0121120-mRNA-1
chr1_3 exon 46573469 46573562 46573469 ID=Msa0121120-mRNA-1:exon:14046;Parent=Msa0121120-mRNA-1
chr1_3 exon 46574067 46574207 46574067 ID=Msa0121120-mRNA-1:exon:14047;Parent=Msa0121120-mRNA-1
chr1_3 exon 46574418 46574498 46574418 ID=Msa0121120-mRNA-1:exon:14048;Parent=Msa0121120-mRNA-1
chr1_3 five_prime_UTR 46560366 46560633 46560366 ID=Msa0121120-mRNA-1:five_prime_utr;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46560634 46560996 46560634 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46561711 46561788 46561711 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46561918 46562122 46561918 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46562302 46562410 46562302 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46563227 46563319 46563227 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46563432 46563527 46563432 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46563644 46563742 46563644 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46563854 46563935 46563854 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46564012 46564071 46564012 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46564164 46564216 46564164 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46564349 46564515 46564349 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46565376 46565586 46565376 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46565679 46565736 46565679 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46571034 46571090 46571034 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46571176 46571421 46571176 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46573163 46573227 46573163 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46573321 46573377 46573321 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46573469 46573562 46573469 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46574067 46574207 46574067 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
chr1_3 CDS 46574418 46574498 46574418 ID=Msa0121120-mRNA-1:cds;Parent=Msa0121120-mRNA-1
Gene Sequence

>Msa0121120

ATGGAAACCGACTCATGCAAGAGTAAGATTCAGATAAACGGTTACTTCGTTTACACACGCAGAAAGCGTAATCATCATCGCGATTTCGATAACGAAGAACCGAAGAGGCTGAAAATCGATGAAAATGTGGATGCGGTGAAGAACGACGTCGTTAAATGGACTTCGAAACGGCAACGGCGGCCGTCGTTTAAGGTGAAAGTTGATTCCGGTGAAGATGTTTCTGCTGCTGGTAAACTCGCTGCTGAGAGTGTTAAGATTGAGAAGAACGAAACGGTTGGTGAGAAGTGGTTGACTATGAAGGAGCTTTTTGATACTGGTTTTCTTGATGGTGTTCCTGTTGTTTATGTCGGTTGCAAAAAAGAGGCTATAAATTCAAGATTGGAGGGAGTGATTGCTGGTGGGGGGATATTGTGCTCATGCTGTCTGTGCAATGGACGCAGAATTATTCCCCCCTCCACGTTTGAGATTCATGCCTGTAATATATATAAGAGAGCAACACAGTATATTTGCTTTGAAAATGGGAAGAGTCTTCTTGAGCTATTGGGAGTATGCAGGGCGGCTCCCTCACATTCTATGGAAGCCACCATTCAAAATTTTCTTTGTTTACCGCCTGAAGAGAAGTATTTTACTTGCAGGAGCTGCAGAGGGGCTTTCCCTGTTTCAACTGTGAAAAGAGTGGGGCTTATATGCCATTCTTGCGTGGAAGCAAGCAAATCTGAAGACAGTCCTATTCGTGGAGTTGGCAAAAGAGTCAGGACTCCTCGACCATATCTGTTTTCTAGTCCATCTAGTATTTCTGAAACGTGTATGTCATCACAAACTAAGAAACAACAGAAGAAGAGAACAAAGTCATCAAAACGGCTCAGCATGTCAAAATCTTCCAAGAAGAGTGCTTCTGTGGCTATTCTTACGCAGAAGAAAAGTTTGTGCAGCATGGAAACAAAGTCATCAAAAGTGTCAGTCAAGTTGAAGATTGCTCCAATTACTTCAAATTTGCAGTGTTCATCTCCACCAAATAAGAGTCAGTTGAGGATCAATAAGAAGCATCAGCGATTGCATAAATTAATTTTTGACGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGGCAGAAACGGCTTGAGGGTATCAAAAAGAAATCCGGAATTCTTTGTCGATGCTGTAACACTGAGATCAGCCCCGCACAGTTTGAGGTTCATGCAGGGTGGGCTTCTCGCAGGAAGCCTTATGCATACATCTACACGTCGAATGGGGTGTCTCTCCATGAGTTGGCATTATTCCTCTCAAAAGATCGCAAATGCACTGCTAAATATAATGATCTTGCATGCATTGTTTGTTGGGATGGTGGAAATTTGTTTCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACGACGTGGTCGGTACTGTCCAATCTGTCAACACATGTTCCTTGGAGAAGGATCTGTGGCTCTCAATCCTGATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATAGAACAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACTTTGAAGCGGAGACTGGTGGATGTGCTTTATGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGTACAATAATAATTTGTGATCAGTGTGAAAAGGAATATCATGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAATTGCCGGAAGGGGACTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGAGAACCTCCTAGTTAGGGAAGCTGAGAAACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGATAGATATTTGGAACCCCTTAATGAGATTGATATAAGATGGAGACTTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCGTTGCTTTTGGAGGCCCTGTCAATATTCAACGAATGCTTTGATCCTATAGTTGACGCAGCTACTGAACGTGACCTTATTCCTTCCATGGTTTATGGACGGAATTTGCAGACTCAGGATTTTGGAGGAGTGTACTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGGCATGCTACGGATTTTTGGTACAGATATTGCAGAACTCCCATTAATTGCTACAAGACACAAGAACCGTGGAAAGGGCTACTTCCAAACATTGTTCTCGTGCATTGAAAGGCTGGTGGCCTTCTTGAATGTGAAGAACCTTGTGTTACCAGCTGCTGAAGAAGCAGAATCCATATGGAAATATAAATTTGGGTTTAGCAGGACGAAACCTGAGCAGAAAGAACTGCCAACAGTTGATGGCATTCAAAGGGACAGTTATGCTTCACAAATCGGTGCCTCGATGTCGGATCATTCATAG
Protein sequence

>Msa0121120

METDSCKSKIQINGYFVYTRRKRNHHRDFDNEEPKRLKIDENVDAVKNDVVKWTSKRQRRPSFKVKVDSGEDVSAAGKLAAESVKIEKNETVGEKWLTMKELFDTGFLDGVPVVYVGCKKEAINSRLEGVIAGGGILCSCCLCNGRRIIPPSTFEIHACNIYKRATQYICFENGKSLLELLGVCRAAPSHSMEATIQNFLCLPPEEKYFTCRSCRGAFPVSTVKRVGLICHSCVEASKSEDSPIRGVGKRVRTPRPYLFSSPSSISETCMSSQTKKQQKKRTKSSKRLSMSKSSKKSASVAILTQKKSLCSMETKSSKVSVKLKIAPITSNLQCSSPPNKSQLRINKKHQRLHKLIFDEDGLPDGAEVAYYARGQKRLEGIKKKSGILCRCCNTEISPAQFEVHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKCTAKYNDLACIVCWDGGNLFLCDGCPRAFHKECASVSSTPRRGRYCPICQHMFLGEGSVALNPDAVAAGRVEGVDPIEQIAKRCIRIVKDFEAETGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRIHSILENLLVREAEKLPESLLDVIKKKQEDRYLEPLNEIDIRWRLVNGKVASPETRPLLLEALSIFNECFDPIVDAATERDLIPSMVYGRNLQTQDFGGVYCALLMVNSSVVSAGMLRIFGTDIAELPLIATRHKNRGKGYFQTLFSCIERLVAFLNVKNLVLPAAEEAESIWKYKFGFSRTKPEQKELPTVDGIQRDSYASQIGASMSDHS*