AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0958250


Find 376 sgRNAs with CRISPR-Local

Find 1316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr6_3 gene 72025631 72047159 72025631 ID=Msa0958250;Name=Msa0958250
chr6_3 mRNA 72025631 72047159 72025631 ID=Msa0958250-mRNA-1;Parent=Msa0958250;Name=Msa0958250-mRNA-1;_AED=0.07;_eAED=0.07;_QI=13|0.92|0.96|0.96|1|1|27|550|1478
chr6_3 exon 72025631 72026295 72025631 ID=Msa0958250-mRNA-1:exon:13089;Parent=Msa0958250-mRNA-1
chr6_3 exon 72026805 72027187 72026805 ID=Msa0958250-mRNA-1:exon:13088;Parent=Msa0958250-mRNA-1
chr6_3 exon 72027291 72027476 72027291 ID=Msa0958250-mRNA-1:exon:13087;Parent=Msa0958250-mRNA-1
chr6_3 exon 72027758 72027934 72027758 ID=Msa0958250-mRNA-1:exon:13086;Parent=Msa0958250-mRNA-1
chr6_3 exon 72028027 72028158 72028027 ID=Msa0958250-mRNA-1:exon:13085;Parent=Msa0958250-mRNA-1
chr6_3 exon 72028281 72028508 72028281 ID=Msa0958250-mRNA-1:exon:13084;Parent=Msa0958250-mRNA-1
chr6_3 exon 72029143 72029220 72029143 ID=Msa0958250-mRNA-1:exon:13083;Parent=Msa0958250-mRNA-1
chr6_3 exon 72029351 72029416 72029351 ID=Msa0958250-mRNA-1:exon:13082;Parent=Msa0958250-mRNA-1
chr6_3 exon 72029508 72029588 72029508 ID=Msa0958250-mRNA-1:exon:13081;Parent=Msa0958250-mRNA-1
chr6_3 exon 72032276 72033057 72032276 ID=Msa0958250-mRNA-1:exon:13080;Parent=Msa0958250-mRNA-1
chr6_3 exon 72033317 72033513 72033317 ID=Msa0958250-mRNA-1:exon:13079;Parent=Msa0958250-mRNA-1
chr6_3 exon 72034030 72034119 72034030 ID=Msa0958250-mRNA-1:exon:13078;Parent=Msa0958250-mRNA-1
chr6_3 exon 72034225 72034319 72034225 ID=Msa0958250-mRNA-1:exon:13077;Parent=Msa0958250-mRNA-1
chr6_3 exon 72036422 72036556 72036422 ID=Msa0958250-mRNA-1:exon:13076;Parent=Msa0958250-mRNA-1
chr6_3 exon 72036844 72036921 72036844 ID=Msa0958250-mRNA-1:exon:13075;Parent=Msa0958250-mRNA-1
chr6_3 exon 72037645 72037773 72037645 ID=Msa0958250-mRNA-1:exon:13074;Parent=Msa0958250-mRNA-1
chr6_3 exon 72037910 72038044 72037910 ID=Msa0958250-mRNA-1:exon:13073;Parent=Msa0958250-mRNA-1
chr6_3 exon 72038213 72038332 72038213 ID=Msa0958250-mRNA-1:exon:13072;Parent=Msa0958250-mRNA-1
chr6_3 exon 72038444 72038495 72038444 ID=Msa0958250-mRNA-1:exon:13071;Parent=Msa0958250-mRNA-1
chr6_3 exon 72039110 72039241 72039110 ID=Msa0958250-mRNA-1:exon:13070;Parent=Msa0958250-mRNA-1
chr6_3 exon 72039575 72039627 72039575 ID=Msa0958250-mRNA-1:exon:13069;Parent=Msa0958250-mRNA-1
chr6_3 exon 72039787 72039882 72039787 ID=Msa0958250-mRNA-1:exon:13068;Parent=Msa0958250-mRNA-1
chr6_3 exon 72040392 72040537 72040392 ID=Msa0958250-mRNA-1:exon:13067;Parent=Msa0958250-mRNA-1
chr6_3 exon 72041535 72041670 72041535 ID=Msa0958250-mRNA-1:exon:13066;Parent=Msa0958250-mRNA-1
chr6_3 exon 72042800 72042953 72042800 ID=Msa0958250-mRNA-1:exon:13065;Parent=Msa0958250-mRNA-1
chr6_3 exon 72043280 72043426 72043280 ID=Msa0958250-mRNA-1:exon:13064;Parent=Msa0958250-mRNA-1
chr6_3 exon 72046833 72047159 72046833 ID=Msa0958250-mRNA-1:exon:13063;Parent=Msa0958250-mRNA-1
chr6_3 five_prime_UTR 72047147 72047159 72047147 ID=Msa0958250-mRNA-1:five_prime_utr;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72046833 72047146 72046833 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72043280 72043426 72043280 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72042800 72042953 72042800 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72041535 72041670 72041535 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72040392 72040537 72040392 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72039787 72039882 72039787 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72039575 72039627 72039575 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72039110 72039241 72039110 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72038444 72038495 72038444 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72038213 72038332 72038213 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72037910 72038044 72037910 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72037645 72037773 72037645 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72036844 72036921 72036844 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72036422 72036556 72036422 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72034225 72034319 72034225 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72034030 72034119 72034030 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72033317 72033513 72033317 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72032276 72033057 72032276 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72029508 72029588 72029508 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72029351 72029416 72029351 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72029143 72029220 72029143 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72028281 72028508 72028281 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72028027 72028158 72028027 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72027758 72027934 72027758 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72027291 72027476 72027291 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72026805 72027187 72026805 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 CDS 72026181 72026295 72026181 ID=Msa0958250-mRNA-1:cds;Parent=Msa0958250-mRNA-1
chr6_3 three_prime_UTR 72025631 72026180 72025631 ID=Msa0958250-mRNA-1:three_prime_utr;Parent=Msa0958250-mRNA-1
Gene Sequence

>Msa0958250

ATGAGTTTCGCCGCATACAAAATGATGCAACACCCAACCGGAATCGACAACTGCGCTTCCGGTTACTTAACCCACTCCCGCTCCGATTTCATCCCTCGTATCCCTCCTCCTGATTCCGATGACCTCGACGCCTCCGATTGGGCCCCGCAACGCGACGCTGCTACACTTCCGAATCTTGTTGTTACTGCCGCGAATGTGCTTGAGGTTTATGTTGTGAGAATTCAACATGATGTGGCGAAGGGGAAGATGAATGCGGATTCTAGGGTTCTTGATGGAGTGAATGATGCCAAGCTTGAACTCGTTTGTCATTACAGGTTGCATGGCAATGTTGAAAGCGTGGCTGTGTTAAGTGTTGGTGGTGGTGATGCTTCTAGGAGGCGAGATTCTATCATCTTAACTTTTAAAGACGCAAAGATTTCAGTTCTAGAGTATGATGATTCTATCCACGGACTTCGTACCAGTTCTTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCAAGAGGTCCGGTGGCGAAGGTTGATCCTCAAGGCAGGTGTGGTGGAGTTCTTGTCTATGATTTGCAAATGATAATACTAAAGACTTCTCAGGCTGGTTCTGGTTTAGTTGGGGAGGATGATGTGTCGGGTTCTGGAGGTGCAGTTGCTGCTCGTGTTGACTCATCTTATATGATAAATCTGCGTGACTTGGATATGAGGCATGTCAAAGATTTTACATTTCTTCATGGCTATATTGAACCTGTGATGGTGATCTTGCATGAACATGAGCTGACTTGGGCTGGGCGTGTTTCATGGAAACATCATACTTGCACGATATCAGCACTTAGCATCAGCACAACGTTGAAGCAGCATCCACTTATTTGGTCAGCTGTTAATCTCCCCCACGATGCCTACAAGCTTCTTGCAGTGCCCTCGCCAATTGGTGGTGTTCTTGTCATTGGTGCGAACACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGTCCTTGAATAGCTACGCTGTTCCCCTTGATAATAGTCAGGAGATGCCAAGATCGAGTTTCAGTGTGGAACTTGATGCTGCCAATGCAACTTGGTTATTGAATGATGTAGCCTTGCTGTCAACAAAAACTGGTGAACTGCTATTGCTTACTCTTATTTACGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTATCATCTGGTGTCACTACAATCGGAAATTCTATGTTTTTTCTCGCCAGTCGATTAGGAGACAGTATGCTGGTGCAATTTTCTTGTGGATCGGGTGTTTCAATGTTATCGTCCAATCTAAAAGAAGAGGTTGGTGATTATGACGTAGATGCTTCTTCAGCAAAGAGATTGCGGCGGTCACCTTCCGATACTTTACAAGATATGGTCAGTGGGGAGGAGCTCTCCTTGTATGGGTCTGCTCCAAATAGAACAGAATCAGCACAGAAATCCTTCTCGTTTGCAGTGAGGGATTCATTGATTAATGTTGGTCCTTTGAAAGATTTCTCGTACGGTTTAAGAATAAATGCTGATGCAAATGCTACGGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGTTGTTCTGGTCATGGGAAAAACGGTTCTCTTTGTGTTCTTCGACAATCAATTTGCCCAGAAGTGATTACTGAGGTTGAGCTTCCTGGTTGCAAAGGAATATGGACTGTTTATCATAAGAGCACACGTTCACTTAATGCTGACTCTTCTAAGCTGGATGAAGATGAATATCATGCATACCTTATTATAAGTTTGGAGTCTCGTACTATGGTACTAGAAACAGCTGATGTTCTGAGTGAGGTTACTGAAAGTGTTGACTACTATGTTCAAGGGAAAACGCTTGCTGCCGGGAACTTATTTGGGAGAGTGTTGTCTTTGGGTGGTCAGCCTTTGTCCATGTTCATAGTCCTCATCAAGGAGTTAGATTCACAGGCTCTCAAATGTTTCTTCATAGGACGTCGTGTTATTCAAGTCTATGAACGTGGTGCTCGAATTCTGGACGGTTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCTAACTCTGAATCTAATTATGGATCTGAGAGTGCTTTGGCATTATCCGTTTCTATAGCTGATCCATACATCTTGCTCAGAATGAGTGATGGAAGTGTTCGACTTTTGGTTGGAGATCCTAGCACCTGCAACATTTCTGTCACTTCTCCAACTTCATTTGAGAGTTCAAAGGGACCAGTTTCATCATGTACACTCTACCATGATAAAGGACCCGAGCCATGGCTAAGGAAAACAAGTACTGATGCATGGCTTTCTACTGGTGTCGGCGAGGCCATTGATGGTACTGATGGTGCAGTTCAGGACCACGGGGATGTTTATTGTGTTGTATGTTACGAAAATGGCAACCTTGAAATATTTGATGTGCCCAATTTCAGTTGTGTTTTTTCTGTGGAAAATTTTCTGTCTGGAAAGAGCCATCTTGTTGATGTTCTCACAAAAGAGGTGCCAAAGGATTCCCAAAAGGGGGATAAAGTTTCTGACGGAGTGGGCAGCCAAGACAGGAAGGATGCCCTGAATATGAAGGTTGTGGAGTTGGCCATGCAGAGATGGTCAGGGAAGCATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAACTCTTTGTTATCATGCATACCTTTATGAAAGTCCAGACGGTACTTCTAAGGTTGAAGATTCTGTATCAGCTGGCGGGCCTGTTGGCCTTAGCAATACTAGTGTTTCTCGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTAGATGTACATGCCAGGGAGGAGACATCAAATGGATCACCTTGTCAACAAATAAATATTTTCAAGAACCTTGGTAATCATGAAGGATTCTTCCTATTGGGGTCAAGACCGGCTTGGGTTATGGTTTTGAGAGAACGGCTTCGTGTTCATCCGCAGTTATGTGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAATGTAAACTGCAATCATGGTCTCATATATGTTACGTCACAGGGTGTTTTGAAGATATGCCAATTGCCTTCTGGCTCAAACTATGATTGCTACTGGCCTGTACAGAAAGTTCCTCTAAAAGCTACTCCACATCAAGTAACTTACTTTGCAGAGAAGAATTTGTATCCGATTATTGTTTCATTTCCTGTTCTTAAGCCACTAAATCAAGTCATTGCTTTAGTTGACCCAGATGCCAACAATCTGACTGAGAATCAGAATTTGAATTCTGATGAGCAAAACCATTTTTATACCATTGAAGAATTTGAGGTTCGTATTATGGAGCCAGAAAAATCTGGTGGCCCTTGGCAAACGAAGGCAACAATACCCATGCAAAGTTCAGAAAATGCTCTCACTGTCAGGATGGTTACACTGATGAATACATCGTCAAAAGAAAATGAAACACTTTTAGCCATTGGTACTGCTTACGTGCAAGGAGAGGATGTCGCTGCAAGAGGGCGTATACTCTTGTTCACTTTGGGGAAAAATACTGATAATCCACAAACTCTGGTTTCAGAGGTGTTCTCGAAGGAATTAAAAGGTGCTATATCTGCCATGGCCGCACTTCAGGGTCATCTATTAGTAGCATCTGGTCCAAAAATTATCCTGCATAAGTGGACTGGCACTGAGTTGAATGGTGTTGCATTTTTTGATGTGCCACCATTGCATGTTGTGAGCTTAAATATTGTAAAAAACTTCATCCTAATTGGCGACATCCATAAAAGCATATATTTTCTTAGTTGGAAAGAGCAGGGTTCTCAGCTTAGCTTATTAGCTAAGGATTTTGGTTCTCTTGATTGTTTTGCAACAGAGTTTTTGATTGATGGAAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAAAATATCCAGATTTTTTACTATGCACCAAAGATGTTAGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCATGTTGGGGCACACGTGACTAAATTCTTAAGGCTGCAGATGTTATCCACTTCTGATCGAACTGGTTCAGCTCCAGGCTCAGATAAAACCAATCGTTTTGCCTTGTTATTTAGTACATTGGATGGTAGTATTGGTTGCATTGCTCCTCTTGATGAGATCACATTCCGTAGACTGCAATCTTTGCAGAAAAAGCTCATTGATGCTGTATCCCACGTTGCTGGTCTAAATCCAAGAGCTTTCAGACTATTCCATTCTAATGGAAAGGCCCATCGTCCAGGCCCTGACAGTATAGTTGACTGCGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCACAAATTCTCTCAAATCTAAATGATCTGTCTCTTGGAACAAGCTTCTTGTAG

Protein sequence

>Msa0958250

MSFAAYKMMQHPTGIDNCASGYLTHSRSDFIPRIPPPDSDDLDASDWAPQRDAATLPNLVVTAANVLEVYVVRIQHDVAKGKMNADSRVLDGVNDAKLELVCHYRLHGNVESVAVLSVGGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVAKVDPQGRCGGVLVYDLQMIILKTSQAGSGLVGEDDVSGSGGAVAARVDSSYMINLRDLDMRHVKDFTFLHGYIEPVMVILHEHELTWAGRVSWKHHTCTISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALSLNSYAVPLDNSQEMPRSSFSVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLSSGVTTIGNSMFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDYDVDASSAKRLRRSPSDTLQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSICPEVITEVELPGCKGIWTVYHKSTRSLNADSSKLDEDEYHAYLIISLESRTMVLETADVLSEVTESVDYYVQGKTLAAGNLFGRVLSLGGQPLSMFIVLIKELDSQALKCFFIGRRVIQVYERGARILDGSFMTQDVSFGASNSESNYGSESALALSVSIADPYILLRMSDGSVRLLVGDPSTCNISVTSPTSFESSKGPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAVQDHGDVYCVVCYENGNLEIFDVPNFSCVFSVENFLSGKSHLVDVLTKEVPKDSQKGDKVSDGVGSQDRKDALNMKVVELAMQRWSGKHSRPFLFGILSDGTTLCYHAYLYESPDGTSKVEDSVSAGGPVGLSNTSVSRLRNLRFVRVPLDVHAREETSNGSPCQQINIFKNLGNHEGFFLLGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDCYWPVQKVPLKATPHQVTYFAEKNLYPIIVSFPVLKPLNQVIALVDPDANNLTENQNLNSDEQNHFYTIEEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLMNTSSKENETLLAIGTAYVQGEDVAARGRILLFTLGKNTDNPQTLVSEVFSKELKGAISAMAALQGHLLVASGPKIILHKWTGTELNGVAFFDVPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMLESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRTGSAPGSDKTNRFALLFSTLDGSIGCIAPLDEITFRRLQSLQKKLIDAVSHVAGLNPRAFRLFHSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLNDLSLGTSFL*