AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0122700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122700 MtrunA17_Chr1g0182301 92.090 177 2 1 360 536 50 214 8.68e-111 331
Msa0122700 MtrunA17_Chr1g0182321 91.525 177 3 1 360 536 50 214 4.68e-110 329
Msa0122700 MtrunA17_Chr1g0212521 82.486 177 19 1 360 536 50 214 7.16e-99 300
Msa0122700 MtrunA17_Chr4g0030911 81.921 177 19 2 360 536 50 213 3.75e-97 296
Msa0122700 MtrunA17_Chr7g0263071 85.876 177 13 1 360 536 50 214 1.09e-96 295
Msa0122700 MtrunA17_Chr2g0327911 71.910 178 34 4 360 536 50 212 2.69e-79 249
Msa0122700 MtrunA17_Chr4g0055651 50.838 179 65 4 360 536 43 200 1.04e-52 179
Msa0122700 MtrunA17_Chr7g0250531 51.955 179 63 4 360 536 43 200 1.13e-52 179
Msa0122700 MtrunA17_Chr8g0335471 51.111 180 64 4 360 536 43 201 9.92e-51 174
Msa0122700 MtrunA17_Chr2g0276931 47.222 180 71 4 360 536 44 202 1.71e-48 168
Msa0122700 MtrunA17_Chr1g0180291 41.176 187 86 5 356 537 44 211 1.28e-36 135
Msa0122700 MtrunA17_Chr4g0032201 38.220 191 92 5 354 536 41 213 6.47e-36 134
Msa0122700 MtrunA17_Chr3g0112681 38.220 191 93 4 354 536 41 214 3.18e-35 132
Msa0122700 MtrunA17_Chr2g0290891 38.587 184 94 4 359 536 40 210 5.73e-35 131
Msa0122700 MtrunA17_Chr2g0276941 34.158 202 114 3 343 538 32 220 8.58e-35 131
Msa0122700 MtrunA17_Chr1g0189361 36.923 195 96 4 354 536 43 222 1.20e-34 130
Msa0122700 MtrunA17_Chr7g0265001 40.860 186 86 5 356 536 47 213 2.17e-34 129
Msa0122700 MtrunA17_Chr6g0458081 37.705 183 95 3 360 536 41 210 2.57e-34 129
Msa0122700 MtrunA17_Chr7g0234201 37.433 187 99 4 354 536 42 214 3.47e-33 126
Msa0122700 MtrunA17_Chr3g0123821 41.096 146 73 1 354 499 45 177 6.72e-33 125
Msa0122700 MtrunA17_Chr2g0283131 39.378 193 92 4 354 538 42 217 1.10e-32 125
Msa0122700 MtrunA17_Chr2g0315551 44.366 142 66 1 354 495 42 170 2.23e-32 124
Msa0122700 MtrunA17_Chr8g0349711 37.500 184 95 4 360 536 41 211 3.68e-32 123
Msa0122700 MtrunA17_Chr8g0381841 39.130 161 80 2 354 509 46 193 6.82e-32 123
Msa0122700 MtrunA17_Chr7g0214241 34.921 189 104 3 354 536 44 219 7.50e-32 123
Msa0122700 MtrunA17_Chr8g0346421 40.411 146 74 1 354 499 55 187 1.20e-31 122
Msa0122700 MtrunA17_Chr4g0040781 38.342 193 94 5 354 538 42 217 1.24e-31 122
Msa0122700 MtrunA17_Chr7g0275991 36.416 173 92 2 354 521 49 208 1.86e-31 122
Msa0122700 MtrunA17_Chr1g0174281 37.288 177 90 3 352 527 42 198 2.21e-31 121
Msa0122700 MtrunA17_Chr2g0319951 41.781 146 72 1 354 499 42 174 3.05e-31 121
Msa0122700 MtrunA17_Chr4g0046261 36.788 193 97 5 354 538 42 217 8.68e-31 119
Msa0122700 MtrunA17_Chr6g0482721 34.225 187 106 2 354 536 41 214 1.09e-30 119
Msa0122700 MtrunA17_Chr3g0130271 38.710 186 90 6 356 536 42 208 1.64e-30 119
Msa0122700 MtrunA17_Chr1g0159481 37.634 186 92 6 356 536 47 213 3.48e-30 118
Msa0122700 MtrunA17_Chr8g0351861 41.096 146 73 1 354 499 45 177 4.01e-30 118
Msa0122700 MtrunA17_Chr8g0384311 37.097 186 92 6 356 536 43 208 7.88e-30 117
Msa0122700 MtrunA17_Chr7g0231131 34.343 198 103 4 352 539 42 222 1.21e-29 116
Msa0122700 MtrunA17_Chr2g0325091 37.566 189 96 3 354 536 40 212 1.27e-29 116
Msa0122700 MtrunA17_Chr1g0197331 37.705 183 94 5 356 536 47 211 4.26e-29 115
Msa0122700 MtrunA17_Chr8g0349681 36.313 179 98 3 360 536 419 583 7.39e-29 121
Msa0122700 MtrunA17_Chr8g0349681 38.750 160 83 2 360 517 210 356 5.39e-27 115
Msa0122700 MtrunA17_Chr8g0349681 41.353 133 65 1 360 492 48 167 1.86e-25 110
Msa0122700 MtrunA17_Chr8g0392931 35.938 192 97 4 354 536 43 217 4.08e-28 112
Msa0122700 MtrunA17_Chr8g0390561 36.986 146 75 2 362 507 46 174 3.53e-27 108
Msa0122700 MtrunA17_Chr3g0109721 31.250 176 97 4 362 536 47 199 5.48e-27 108
Msa0122700 MtrunA17_Chr5g0433561 30.114 176 99 4 362 536 47 199 6.40e-27 108
Msa0122700 MtrunA17_Chr8g0382221 32.961 179 99 3 355 525 39 204 6.63e-24 100
Msa0122700 MtrunA17_Chr1g0199331 37.226 137 72 2 362 497 68 191 2.21e-23 98.2
Msa0122700 MtrunA17_Chr4g0034871 37.725 167 86 6 361 520 44 199 1.02e-22 96.7
Msa0122700 MtrunA17_Chr5g0400131 32.967 182 107 3 355 536 39 205 1.18e-22 96.3
Msa0122700 MtrunA17_Chr4g0058441 31.169 308 143 12 27 281 155 446 1.24e-22 101
Msa0122700 MtrunA17_Chr3g0123971 31.868 182 109 2 355 536 39 205 2.38e-22 95.5
Msa0122700 MtrunA17_Chr4g0075191 31.835 267 141 9 27 281 441 678 2.84e-22 101
Msa0122700 MtrunA17_Chr8g0381211 29.052 327 128 11 27 250 81 406 4.92e-22 99.8
Msa0122700 MtrunA17_Chr4g0055081 34.507 142 80 1 355 496 39 167 1.82e-21 92.8
Msa0122700 MtrunA17_Chr6g0466301 35.227 176 97 5 343 512 25 189 5.40e-21 91.7
Msa0122700 MtrunA17_Chr6g0465491 35.227 176 97 5 343 512 25 189 5.40e-21 91.7
Msa0122700 MtrunA17_Chr2g0331691 34.078 179 99 5 361 535 46 209 5.71e-20 88.6
Msa0122700 MtrunA17_Chr8g0352741 26.498 317 135 6 62 281 4 319 9.15e-20 90.9
Msa0122700 MtrunA17_Chr1g0201121 33.161 193 110 6 343 527 25 206 9.44e-20 88.2
Msa0122700 MtrunA17_Chr8g0383261 38.298 141 73 3 361 497 48 178 2.45e-19 87.0
Msa0122700 MtrunA17_Chr4g0004661 35.000 180 97 5 361 536 100 263 2.71e-19 88.2
Msa0122700 MtrunA17_Chr6g0466161 31.395 172 102 3 361 527 26 186 5.25e-19 85.9
Msa0122700 MtrunA17_Chr6g0465471 34.507 142 77 3 361 497 26 156 2.02e-18 84.3
Msa0122700 MtrunA17_Chr4g0037021 34.667 150 90 5 367 513 47 191 3.33e-15 74.7
Msa0122700 MtrunA17_Chr1g0178291 36.170 141 70 3 361 501 464 584 7.99e-15 77.8
Msa0122700 MtrunA17_Chr6g0486041 32.857 140 84 6 366 501 46 179 3.49e-14 72.0
Msa0122700 MtrunA17_Chr3g0117931 32.836 134 82 5 367 497 49 177 1.01e-13 70.5
Msa0122700 MtrunA17_Chr2g0325101 33.594 128 79 4 367 492 47 170 6.12e-13 68.2
Msa0122700 MtrunA17_Chr8g0341191 28.636 220 84 4 22 168 462 681 8.38e-13 71.6
Msa0122700 MtrunA17_Chr8g0354181 36.957 92 55 2 223 314 179 267 4.29e-12 67.4
Msa0122700 MtrunA17_Chr8g0371501 31.343 134 84 5 367 497 47 175 1.03e-11 64.3
Msa0122700 MtrunA17_Chr6g0479711 46.667 60 32 0 222 281 27 86 1.69e-11 61.2
Msa0122700 MtrunA17_Chr3g0135241 52.542 59 27 1 223 281 29 86 1.73e-11 61.2
Msa0122700 MtrunA17_Chr6g0466431 37.179 78 46 2 344 419 17 93 2.93e-11 60.5
Msa0122700 MtrunA17_Chr6g0465611 37.179 78 46 2 344 419 17 93 2.93e-11 60.5
Msa0122700 MtrunA17_Chr7g0267681 38.983 59 36 0 223 281 15 73 3.47e-11 59.7
Msa0122700 MtrunA17_Chr4g0046211 36.458 96 58 3 367 460 47 141 5.80e-11 60.8
Msa0122700 MtrunA17_Chr8g0392081 34.392 189 81 8 27 179 202 383 6.73e-11 64.7
Msa0122700 MtrunA17_Chr5g0405791 31.343 134 84 5 367 497 47 175 7.08e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122700 AT3G53610.2 81.356 177 21 1 360 536 50 214 1.54e-99 302
Msa0122700 AT3G53610.3 81.356 177 21 1 360 536 50 214 1.54e-99 302
Msa0122700 AT3G53610.1 81.356 177 21 1 360 536 50 214 1.54e-99 302
Msa0122700 AT5G59840.1 81.356 177 21 1 360 536 50 214 2.04e-98 299
Msa0122700 AT3G46060.2 80.791 177 22 1 360 536 50 214 2.90e-98 299
Msa0122700 AT3G46060.3 80.791 177 22 1 360 536 50 214 2.90e-98 299
Msa0122700 AT3G46060.1 80.791 177 22 1 360 536 50 214 2.90e-98 299
Msa0122700 AT5G03520.2 71.921 203 44 2 334 536 14 203 2.24e-96 293
Msa0122700 AT5G03520.1 76.271 177 29 2 360 536 50 213 2.44e-90 278
Msa0122700 AT3G09900.1 75.843 178 30 2 360 536 50 215 1.27e-89 276
Msa0122700 AT1G02130.1 51.111 180 64 4 360 536 43 201 6.64e-54 182
Msa0122700 AT4G17530.1 50.838 179 65 4 360 536 43 200 2.14e-50 173
Msa0122700 AT5G47200.1 50.838 179 65 4 360 536 43 200 3.81e-50 172
Msa0122700 AT3G11730.1 51.497 167 64 3 360 522 43 196 9.72e-49 169
Msa0122700 AT4G17160.1 39.665 179 91 3 360 536 41 204 6.43e-38 139
Msa0122700 AT4G35860.1 39.674 184 92 3 359 536 40 210 7.85e-38 139
Msa0122700 AT4G35860.2 40.341 176 86 3 367 536 2 164 1.26e-37 137
Msa0122700 AT4G17170.1 39.674 184 92 4 359 536 40 210 7.26e-37 137
Msa0122700 AT1G09630.1 36.842 190 103 2 354 539 41 217 8.58e-37 137
Msa0122700 AT3G07410.1 38.298 188 98 3 354 536 41 215 1.89e-35 133
Msa0122700 AT4G39990.1 37.113 194 99 4 354 539 46 224 5.50e-35 132
Msa0122700 AT2G43130.1 36.216 185 103 2 354 536 41 212 1.86e-34 130
Msa0122700 AT1G07410.1 35.829 187 101 3 354 536 41 212 2.27e-34 130
Msa0122700 AT1G16920.1 44.521 146 68 1 354 499 42 174 2.28e-34 130
Msa0122700 AT1G05810.1 37.500 192 100 4 354 539 41 218 3.77e-34 129
Msa0122700 AT5G59150.1 42.466 146 71 1 354 499 41 173 4.01e-34 129
Msa0122700 AT1G05810.2 37.500 192 100 4 354 539 87 264 7.66e-34 130
Msa0122700 AT3G46830.1 35.751 193 96 3 354 536 41 215 1.40e-33 128
Msa0122700 AT3G46830.2 35.751 193 96 3 354 536 41 215 1.40e-33 128
Msa0122700 AT5G59150.2 44.361 133 61 1 367 499 3 122 5.57e-33 124
Msa0122700 AT5G47520.1 36.788 193 96 3 354 536 43 219 6.72e-33 126
Msa0122700 AT5G65270.1 35.938 192 101 4 354 536 46 224 1.09e-32 125
Msa0122700 AT1G73640.1 38.506 174 90 2 354 523 42 202 1.49e-32 125
Msa0122700 AT4G18430.1 36.788 193 97 4 352 536 40 215 2.25e-32 124
Msa0122700 AT5G03530.2 39.247 186 89 6 356 536 43 209 2.85e-32 124
Msa0122700 AT5G03530.1 39.247 186 89 6 356 536 43 209 2.85e-32 124
Msa0122700 AT5G45750.1 37.234 188 98 3 354 536 42 214 3.88e-32 124
Msa0122700 AT2G31680.1 41.096 146 73 1 354 499 41 173 5.11e-32 124
Msa0122700 AT1G01200.1 40.123 162 84 2 343 503 45 194 5.54e-32 124
Msa0122700 AT5G47960.1 35.938 192 103 3 352 536 42 220 8.17e-32 123
Msa0122700 AT1G18200.1 41.447 152 76 1 354 505 42 180 1.06e-31 123
Msa0122700 AT1G28550.1 39.062 192 95 4 354 538 42 218 1.58e-31 122
Msa0122700 AT4G18800.1 37.634 186 98 3 354 536 42 212 4.44e-31 120
Msa0122700 AT5G60860.1 37.173 191 95 4 354 536 42 215 7.62e-31 120
Msa0122700 AT3G15060.1 40.698 172 81 3 354 518 42 199 2.09e-30 119
Msa0122700 AT1G06400.1 40.541 148 75 1 354 501 42 176 3.43e-30 118
Msa0122700 AT3G12160.1 39.865 148 76 1 352 499 42 176 5.70e-30 118
Msa0122700 AT2G33870.1 37.173 191 98 4 354 537 42 217 2.04e-29 116
Msa0122700 AT1G43890.3 42.446 139 65 3 356 492 43 168 7.37e-29 114
Msa0122700 AT1G43890.1 42.446 139 65 3 356 492 43 168 7.37e-29 114
Msa0122700 AT1G43890.2 42.446 139 65 3 356 492 43 168 7.37e-29 114
Msa0122700 AT3G09910.5 37.952 166 88 3 356 519 43 195 8.01e-29 114
Msa0122700 AT3G09910.4 37.952 166 88 3 356 519 43 195 8.01e-29 114
Msa0122700 AT4G19640.1 33.673 196 105 6 343 536 27 199 6.32e-28 111
Msa0122700 AT3G09910.3 41.096 146 71 3 356 499 43 175 1.02e-27 111
Msa0122700 AT3G09910.1 41.096 146 71 3 356 499 43 175 1.02e-27 111
Msa0122700 AT3G09910.2 41.096 146 71 3 356 499 43 175 1.02e-27 111
Msa0122700 AT3G54840.3 38.686 137 70 2 362 497 36 159 7.32e-26 104
Msa0122700 AT5G45130.1 31.122 196 110 6 343 536 27 199 1.17e-25 105
Msa0122700 AT3G54840.1 38.686 137 70 2 362 497 70 193 2.49e-25 104
Msa0122700 AT3G54840.2 40.152 132 65 2 362 492 70 188 4.94e-25 103
Msa0122700 AT4G39890.1 37.762 143 75 2 355 496 39 168 7.41e-25 103
Msa0122700 AT5G45130.2 30.612 196 113 5 343 537 35 208 8.47e-25 103
Msa0122700 AT2G22290.1 32.418 182 108 2 355 536 39 205 1.40e-23 99.4
Msa0122700 AT4G09720.6 36.416 173 93 5 361 527 10 171 4.56e-23 97.1
Msa0122700 AT4G09720.5 36.416 173 93 5 361 527 10 171 4.56e-23 97.1
Msa0122700 AT4G09720.2 36.416 173 93 5 361 527 10 171 4.56e-23 97.1
Msa0122700 AT3G18820.1 36.747 166 90 4 361 522 44 198 2.17e-22 95.9
Msa0122700 AT2G21880.4 37.363 182 84 5 361 527 20 186 2.24e-22 95.5
Msa0122700 AT2G21880.3 37.363 182 84 5 361 527 20 186 2.24e-22 95.5
Msa0122700 AT4G09720.1 34.896 192 107 6 343 527 25 205 2.53e-22 95.9
Msa0122700 AT5G10260.1 32.418 182 108 3 355 536 39 205 2.66e-22 95.9
Msa0122700 AT2G21880.1 37.363 182 84 5 361 527 45 211 4.00e-22 95.5
Msa0122700 AT2G44610.1 31.868 182 110 2 355 536 39 206 4.25e-22 95.1
Msa0122700 AT1G52280.1 35.556 180 95 5 361 536 44 206 3.08e-21 92.8
Msa0122700 AT4G09720.4 34.518 197 106 7 343 527 25 210 8.76e-21 91.7
Msa0122700 AT1G49300.2 34.078 179 98 6 361 535 44 206 3.73e-20 89.7
Msa0122700 AT1G49300.1 34.078 179 98 6 361 535 44 206 3.73e-20 89.7
Msa0122700 AT1G22740.1 34.884 172 94 4 361 527 44 202 3.88e-20 89.4
Msa0122700 AT5G64990.1 31.319 182 110 3 355 535 37 204 9.02e-20 88.6
Msa0122700 AT4G09720.3 33.005 203 107 7 343 527 25 216 1.11e-19 88.6
Msa0122700 AT3G16100.1 33.702 181 97 5 361 536 44 206 1.62e-19 87.8
Msa0122700 AT4G19640.2 35.849 106 65 2 343 446 27 131 1.11e-17 80.9
Msa0122700 AT5G64990.2 30.159 189 110 4 355 535 37 211 1.85e-17 82.0
Msa0122700 AT4G19640.3 36.975 119 71 3 343 458 27 144 3.33e-17 80.9
Msa0122700 AT5G39620.1 33.333 147 74 4 360 497 40 171 8.82e-17 79.7
Msa0122700 AT4G35020.1 35.294 136 80 5 369 501 49 179 6.18e-15 74.3
Msa0122700 AT4G35020.2 35.294 136 80 5 369 501 49 179 6.18e-15 74.3
Msa0122700 AT4G35020.3 35.294 136 80 5 369 501 49 179 6.18e-15 74.3
Msa0122700 AT3G48040.1 34.328 134 81 5 361 492 44 172 1.59e-14 73.2
Msa0122700 AT5G62880.1 33.094 139 87 4 367 503 49 183 1.73e-14 73.6
Msa0122700 AT2G44690.1 34.127 126 77 4 369 492 61 182 1.81e-14 73.2
Msa0122700 AT4G28950.1 31.884 138 84 5 367 501 47 177 6.35e-14 71.6
Msa0122700 AT5G45970.1 33.582 134 81 5 367 497 47 175 6.47e-14 71.2
Msa0122700 AT2G21880.2 32.967 182 84 6 361 527 45 203 1.41e-13 70.5
Msa0122700 AT3G51300.1 32.090 134 83 5 367 497 47 175 5.40e-13 68.6
Msa0122700 AT1G20090.1 34.884 129 76 5 367 492 46 169 5.66e-13 68.6
Msa0122700 AT1G75840.1 34.109 129 77 5 367 492 47 170 6.79e-13 68.2
Msa0122700 AT3G48040.2 32.576 132 82 5 356 485 39 165 1.55e-12 66.6
Msa0122700 AT5G46025.1 30.702 114 65 2 387 499 6 106 2.78e-12 64.3
Msa0122700 AT2G17800.2 32.090 134 83 5 367 497 47 175 3.08e-12 66.2
Msa0122700 AT2G17800.1 32.090 134 83 5 367 497 47 175 3.08e-12 66.2
Msa0122700 AT5G55080.1 26.712 146 91 3 354 499 42 171 6.75e-12 65.9
Msa0122700 AT5G62880.2 33.058 121 75 4 367 485 49 165 1.90e-11 63.9
Msa0122700 AT3G51290.2 32.576 132 81 5 369 497 650 776 2.08e-11 67.4
Msa0122700 AT4G35950.1 31.343 134 84 5 367 497 47 175 2.27e-11 63.9
Msa0122700 AT5G55190.1 26.506 166 99 4 373 531 61 210 5.23e-11 63.2

Find 135 sgRNAs with CRISPR-Local

Find 1086 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACAACCACCCAGTATT+TGG 0.230674 1_3:+49486316 None:intergenic
TGCTACTTATTGGGTGTTAA+TGG 0.249211 1_3:-49481707 Msa0122700:intron
AGCGAATCAAGTTGCAAATA+TGG 0.255433 1_3:-49485584 Msa0122700:CDS
TTACTCTTTGTCCATCCTTT+TGG 0.270126 1_3:-49482418 Msa0122700:intron
TTAGCATTGATTTCAAAATA+AGG 0.283837 1_3:-49485626 Msa0122700:intron
TGATTTGGAGTATGAGAAAT+AGG 0.293210 1_3:-49486586 Msa0122700:CDS
GTTGGTTAATCTTGAGTGTT+TGG 0.305709 1_3:+49481880 None:intergenic
TCATTGGAGGATTCAGTATT+CGG 0.310484 1_3:-49487301 Msa0122700:CDS
GTGGAGAGATTTAACTTCAT+TGG 0.311859 1_3:-49487317 Msa0122700:CDS
AGTGGTCAACTTGAGTCTTT+TGG 0.318961 1_3:-49487449 Msa0122700:CDS
TTGGTTAATCTTGAGTGTTT+GGG 0.325251 1_3:+49481881 None:intergenic
CAAAATAACAATGAAGAAAA+AGG 0.325961 1_3:+49486762 None:intergenic
GCTGTCGATCGATGTGTATT+GGG 0.329412 1_3:-49486344 Msa0122700:CDS
CGATTGAAGCCTCCTCTTCA+AGG 0.330900 1_3:+49480577 None:intergenic
CTCTACAAGGGTGAAATTCT+AGG 0.348076 1_3:-49480642 Msa0122700:CDS
TAATCGGATCGAGCTCTTGC+AGG 0.360612 1_3:+49488159 None:intergenic
AGGAAATCAAAGTCCTCTTA+TGG 0.361174 1_3:-49486520 Msa0122700:CDS
ACACTACCGTTTGGGTGATT+TGG 0.365952 1_3:-49486601 Msa0122700:CDS
TCGCTTACCATCAAGCTCTA+TGG 0.377596 1_3:+49485602 None:intergenic
TTATTTGGCACACTACCGTT+TGG 0.377989 1_3:-49486610 Msa0122700:CDS
GGGTTCAAGAAGTAACAAAA+AGG 0.381291 1_3:-49480530 Msa0122700:CDS
TACAACATGATTCTCCTTTG+TGG 0.383976 1_3:-49487405 Msa0122700:CDS
TCAAAAGAGTGGCTTTCTCT+TGG 0.386005 1_3:-49486901 Msa0122700:CDS
GGAGAAGGTTGTTGTTTGTA+TGG 0.387481 1_3:-49487134 Msa0122700:CDS
GGAAAATGATCTAGGTGAAT+TGG 0.391221 1_3:-49486965 Msa0122700:CDS
GACACACTCTCTAGAGGCTT+CGG 0.393267 1_3:+49486817 None:intergenic
TCAAGCTCCGCTTCCATAAG+AGG 0.399177 1_3:+49486507 None:intergenic
GCAGAGCCAGCTCCCTGGTC+TGG 0.400030 1_3:+49481858 None:intergenic
TATTTGGCACACTACCGTTT+GGG 0.401489 1_3:-49486609 Msa0122700:CDS
CACCATACAGAAGCACTTCT+CGG 0.404394 1_3:+49487337 None:intergenic
GTGAGGTTTGTGTTAGAAAT+GGG 0.405584 1_3:-49487182 Msa0122700:CDS
TCATGAACAACGCAACAAAC+AGG 0.406312 1_3:+49486246 None:intergenic
GGCTGTCGATCGATGTGTAT+TGG 0.408455 1_3:-49486345 Msa0122700:CDS
AGTGGAATTGGACGTGGTTG+TGG 0.411715 1_3:-49487155 Msa0122700:CDS
TGGAGGCCTTTGGAAAAGTC+TGG 0.412922 1_3:-49486929 Msa0122700:CDS
AGCAAACATTGTGTATAGTC+AGG 0.416706 1_3:+49481584 None:intergenic
AACAACATCCTTCGCCTACT+TGG 0.417142 1_3:-49481555 Msa0122700:intron
CGGTTTCGAACCATTACAAC+TGG 0.420732 1_3:-49485543 Msa0122700:intron
CATTGGAGGATTCAGTATTC+GGG 0.423987 1_3:-49487300 Msa0122700:CDS
CTTGATTAGGTAATCGTAAT+CGG 0.424837 1_3:+49488143 None:intergenic
GAAATGGGGAAGAGTGGAAT+TGG 0.425451 1_3:-49487167 Msa0122700:CDS
AGTATTCGGGTGGAGGAGAT+TGG 0.431742 1_3:-49487287 Msa0122700:CDS
AGTGAGGTTTGTGTTAGAAA+TGG 0.434636 1_3:-49487183 Msa0122700:CDS
CATCTGAGAAACGTAATAGA+AGG 0.443048 1_3:+49485788 None:intergenic
CTTCTATTACGTTTCTCAGA+TGG 0.443228 1_3:-49485787 Msa0122700:CDS
CCCGGAATAATTTGTGGAAA+AGG 0.447215 1_3:-49486853 Msa0122700:CDS
AGGGGAAACTTTCAAGGCGT+TGG 0.448996 1_3:-49480611 Msa0122700:CDS
CGATGAGGAGAAGCTTGATT+AGG 0.449067 1_3:+49488130 None:intergenic
GCTTGCTATTACAGATAGAA+AGG 0.454747 1_3:-49487217 Msa0122700:intron
AACTTCAAAGGGTCAAGCTC+TGG 0.455648 1_3:-49482320 Msa0122700:CDS
GCGAATCAAGTTGCAAATAT+GGG 0.458264 1_3:-49485583 Msa0122700:CDS
TTCCAGCCCGGAATAATTTG+TGG 0.459287 1_3:-49486859 Msa0122700:CDS
GCTTATTACCGTGGAGCAAT+GGG 0.460469 1_3:-49482828 Msa0122700:CDS
ATAGAAAGGGGAAACTTTCA+AGG 0.480027 1_3:-49480617 Msa0122700:CDS
GAAATTCTAGGTTATAGAAA+GGG 0.480120 1_3:-49480630 Msa0122700:CDS
CCCTTTGCTTTCATCCATGT+CGG 0.481245 1_3:+49482455 None:intergenic
AGCCAGCTCCCTGGTCTGGT+TGG 0.481793 1_3:+49481862 None:intergenic
CAATGTCAACAAAATATTAG+TGG 0.483464 1_3:-49482487 Msa0122700:CDS
ATAAGGACCATAGAGCTTGA+TGG 0.484066 1_3:-49485609 Msa0122700:CDS
GTGGAGGAGATTGGTTCAAA+AGG 0.484919 1_3:-49487278 Msa0122700:CDS
AATGTCAACAAAATATTAGT+GGG 0.485156 1_3:-49482486 Msa0122700:CDS
GAAGCGGAGCTTGAGTAGAT+TGG 0.486310 1_3:-49486498 Msa0122700:CDS
ATTGGACGTGGTTGTGGAGA+AGG 0.486639 1_3:-49487149 Msa0122700:CDS
AGAGCTTGACCCTTTGAAGT+TGG 0.487525 1_3:+49482322 None:intergenic
TTTGTGTTGGAAAATGATCT+AGG 0.487917 1_3:-49486973 Msa0122700:CDS
ACACACTCTCTAGAGGCTTC+GGG 0.488042 1_3:+49486818 None:intergenic
TGAAATTCTAGGTTATAGAA+AGG 0.491410 1_3:-49480631 Msa0122700:CDS
AGCTTATTACCGTGGAGCAA+TGG 0.491934 1_3:-49482829 Msa0122700:CDS
TTAGGCTGTTCCAACTTCAA+AGG 0.500392 1_3:-49482332 Msa0122700:intron
CTGAAACTAACCAGTTGTAA+TGG 0.502216 1_3:+49485533 None:intergenic
TAGGCTGTTCCAACTTCAAA+GGG 0.502333 1_3:-49482331 Msa0122700:CDS
CAAGATTAACCAACCAGACC+AGG 0.511143 1_3:-49481871 Msa0122700:CDS
GAGAGATTTAACTTCATTGG+AGG 0.511933 1_3:-49487314 Msa0122700:CDS
GAGAAGGTTGTTGTTTGTAT+GGG 0.516012 1_3:-49487133 Msa0122700:CDS
CTTGAGCAGAGCCAGCTCCC+TGG 0.516656 1_3:+49481853 None:intergenic
CAAGCTCTGGCAGATGAATA+CGG 0.517609 1_3:-49482307 Msa0122700:CDS
CAAAATATTAGTGGGGAACA+AGG 0.518907 1_3:-49482478 Msa0122700:CDS
GTGGGTAAGGGATGTGAGAG+TGG 0.531713 1_3:-49487467 Msa0122700:intron
TTCCACAAATTATTCCGGGC+TGG 0.532203 1_3:+49486857 None:intergenic
AAGTAGGCGAAGGATGTTGT+TGG 0.533254 1_3:+49481557 None:intergenic
GGCCGAGAAGTGCTTCTGTA+TGG 0.533883 1_3:-49487339 Msa0122700:CDS
TCCTACATAGATTTCCAGCC+CGG 0.537077 1_3:-49486871 Msa0122700:CDS
AACCAACCAGACCAGGGAGC+TGG 0.539659 1_3:-49481864 Msa0122700:CDS
AAAGGTTGCGAAGTTGAGTG+AGG 0.542096 1_3:-49487199 Msa0122700:CDS
AGGATTCAGTATTCGGGTGG+AGG 0.543302 1_3:-49487294 Msa0122700:CDS
TTGATGGGCGGTGGTGTACG+TGG 0.551672 1_3:-49486366 Msa0122700:CDS
TGAGGTTGATGCAATGGTGG+AGG 0.552505 1_3:-49486540 Msa0122700:CDS
GTGTTAGAAATGGGGAAGAG+TGG 0.554016 1_3:-49487173 Msa0122700:CDS
TTGTTCAATCCTTGAAGAGG+AGG 0.554171 1_3:-49480586 Msa0122700:CDS
TTGATCGGAGTGGAGTCACT+TGG 0.558298 1_3:-49487360 Msa0122700:CDS
TCAAAGTCCTCTTATGGAAG+CGG 0.559326 1_3:-49486514 Msa0122700:CDS
CCGACATGGATGAAAGCAAA+GGG 0.559863 1_3:-49482455 Msa0122700:CDS
AATATATTGGAGCACCAAGT+AGG 0.564792 1_3:+49481541 None:intergenic
CTAATCAAGCTTCTCCTCAT+CGG 0.565419 1_3:-49488129 Msa0122700:CDS
GTCTGGCACCTTCAAAAGAG+TGG 0.565528 1_3:-49486912 Msa0122700:CDS
CTGTCGATCGATGTGTATTG+GGG 0.570755 1_3:-49486343 Msa0122700:CDS
TTTCATTCATAGAACATGCA+TGG 0.573637 1_3:+49486467 None:intergenic
AAATTCTAGGTTATAGAAAG+GGG 0.577129 1_3:-49480629 Msa0122700:CDS
TTGCAAATATGGGACACGGC+TGG 0.578666 1_3:-49485573 Msa0122700:CDS
TGGTTAATCTTGAGTGTTTG+GGG 0.580908 1_3:+49481882 None:intergenic
GATTTGTTCAATCCTTGAAG+AGG 0.582997 1_3:-49480589 Msa0122700:CDS
TACATGGAAAACCAAAAGGA+TGG 0.586800 1_3:+49482407 None:intergenic
CATACTCCAAATCACCCAAA+CGG 0.587360 1_3:+49486595 None:intergenic
TGGAGGAGATTGGTTCAAAA+GGG 0.592540 1_3:-49487277 Msa0122700:CDS
AACTAATATGAATGTAGATG+AGG 0.592652 1_3:-49482175 Msa0122700:CDS
TCACAAACGTCTTCTTGCTG+TGG 0.593063 1_3:-49481828 Msa0122700:intron
GGGAAGAGTGGAATTGGACG+TGG 0.594689 1_3:-49487161 Msa0122700:CDS
CTTCTCCTCATCGGTGATAG+CGG 0.601359 1_3:-49488120 Msa0122700:CDS
AGTGGGGAACAAGGCCGACA+TGG 0.603133 1_3:-49482469 Msa0122700:CDS
TGTTTGTTGCGTTGTTCATG+AGG 0.604209 1_3:-49486244 Msa0122700:intron
GCCGACATGGATGAAAGCAA+AGG 0.604455 1_3:-49482456 Msa0122700:CDS
TGGAGGATTCAGTATTCGGG+TGG 0.605492 1_3:-49487297 Msa0122700:CDS
CAAGTTGCAAATATGGGACA+CGG 0.605581 1_3:-49485577 Msa0122700:CDS
TATTGGGCAGCTTATTACCG+TGG 0.608798 1_3:-49482837 Msa0122700:intron
TCGGATCGAGCTCTTGCAGG+TGG 0.611640 1_3:+49488162 None:intergenic
GGCTTCAATCGAAGAACTCA+AGG 0.613564 1_3:-49480565 Msa0122700:CDS
GCAAAATACCCATTGCTCCA+CGG 0.620774 1_3:+49482820 None:intergenic
ACTGTTAAAAGATGACTCAT+CGG 0.623062 1_3:+49482782 None:intergenic
ACAAAAGACACACTCTCTAG+AGG 0.623953 1_3:+49486811 None:intergenic
GTGTTGATAGATACTCTACA+AGG 0.626411 1_3:-49480655 Msa0122700:intron
TTGGAGCACCAAGTAGGCGA+AGG 0.626763 1_3:+49481547 None:intergenic
GGACAAAGAGTAAGTGTGTG+AGG 0.635647 1_3:+49482428 None:intergenic
CGAGAAGTGCTTCTGTATGG+TGG 0.640730 1_3:-49487336 Msa0122700:CDS
TCCGGGCTGGAAATCTATGT+AGG 0.640881 1_3:+49486870 None:intergenic
CATGAACAACGCAACAAACA+GGG 0.651916 1_3:+49486247 None:intergenic
TGAGGTTTGTGTTAGAAATG+GGG 0.654164 1_3:-49487181 Msa0122700:CDS
AAGATTAACCAACCAGACCA+GGG 0.666777 1_3:-49481870 Msa0122700:CDS
GGGACACGGCTGGTCAAGAG+CGG 0.673808 1_3:-49485563 Msa0122700:CDS
AGAAAGTGACTCGAAGACTG+AGG 0.674623 1_3:-49482112 Msa0122700:intron
ATGTCAACAAAATATTAGTG+GGG 0.680013 1_3:-49482485 Msa0122700:CDS
CACAAAGAGAACCTACCCGA+TGG 0.683809 1_3:+49485738 None:intergenic
TGTTGATAGATACTCTACAA+GGG 0.701034 1_3:-49480654 Msa0122700:intron
TTCAATCGAAGAACTCAAGG+TGG 0.715226 1_3:-49480562 Msa0122700:CDS
ACGAACCGCTATCACCGATG+AGG 0.719307 1_3:+49488115 None:intergenic
TGTCGATCGATGTGTATTGG+GGG 0.725802 1_3:-49486342 Msa0122700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATAATAAAATTAAA+CGG - chr1_3:49481180-49481199 Msa0122700:intron 0.0%
!! AAATATATAATAAAATTAAA+CGG - chr1_3:49481180-49481199 Msa0122700:intron 0.0%
!! ATACTATTTAATATTTATAG+TGG + chr1_3:49483370-49483389 None:intergenic 10.0%
!!! TATCTTTTAAAATCTTAAAA+AGG - chr1_3:49485635-49485654 Msa0122700:intron 10.0%
!!! CAAATATTTACTATTTTTTT+TGG - chr1_3:49487235-49487254 Msa0122700:intron 10.0%
!!! TTATTTTAAACTTTATTCTT+TGG - chr1_3:49487296-49487315 Msa0122700:CDS 10.0%
!! ATACTATTTAATATTTATAG+TGG + chr1_3:49483370-49483389 None:intergenic 10.0%
!!! TATCTTTTAAAATCTTAAAA+AGG - chr1_3:49485635-49485654 Msa0122700:intron 10.0%
!!! CAAATATTTACTATTTTTTT+TGG - chr1_3:49487235-49487254 Msa0122700:intron 10.0%
!!! TTATTTTAAACTTTATTCTT+TGG - chr1_3:49487296-49487315 Msa0122700:CDS 10.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr1_3:49480705-49480724 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr1_3:49480832-49480851 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr1_3:49480831-49480850 Msa0122700:intron 15.0%
!! AAAATAAAAAGTGGAAAAAA+AGG - chr1_3:49482054-49482073 Msa0122700:intron 15.0%
!! AAATAAAAAGTGGAAAAAAA+GGG - chr1_3:49482055-49482074 Msa0122700:intron 15.0%
!!! AATTTGTTGCTTAAAAAAAA+CGG - chr1_3:49482610-49482629 Msa0122700:intron 15.0%
!!! AATAAGTTGAAAACAAATTA+CGG - chr1_3:49482687-49482706 Msa0122700:intron 15.0%
!! ATACACTAATAATAATAAAG+AGG + chr1_3:49482816-49482835 None:intergenic 15.0%
!! ATCTTAAAAGATCTATTAAT+AGG + chr1_3:49483544-49483563 None:intergenic 15.0%
!! AAATTTGTGTAAATGAATTT+AGG + chr1_3:49483790-49483809 None:intergenic 15.0%
!!! AACATGAATTTATTTTTAGA+AGG + chr1_3:49484488-49484507 None:intergenic 15.0%
!!! ACCAGTTTTATTTATTTAAT+TGG - chr1_3:49485305-49485324 Msa0122700:intron 15.0%
!! TCCAATTAAATAAATAAAAC+TGG + chr1_3:49485309-49485328 None:intergenic 15.0%
!! TTTAATTGGACTATATTAAA+AGG - chr1_3:49485319-49485338 Msa0122700:intron 15.0%
!! AATATTTGACAGATAAATAA+GGG + chr1_3:49485616-49485635 None:intergenic 15.0%
!! TAATATTTGACAGATAAATA+AGG + chr1_3:49485617-49485636 None:intergenic 15.0%
!! TTAATCACATATCTATTTAT+TGG - chr1_3:49487039-49487058 Msa0122700:intron 15.0%
!! ATTTAATAAAATATCGTATG+AGG - chr1_3:49487461-49487480 Msa0122700:CDS 15.0%
!! ATTTCATAAACTTATTTCAA+AGG + chr1_3:49487770-49487789 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr1_3:49480705-49480724 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr1_3:49480832-49480851 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr1_3:49480831-49480850 Msa0122700:intron 15.0%
!! AAAATAAAAAGTGGAAAAAA+AGG - chr1_3:49482054-49482073 Msa0122700:intron 15.0%
!! AAATAAAAAGTGGAAAAAAA+GGG - chr1_3:49482055-49482074 Msa0122700:intron 15.0%
!!! AATTTGTTGCTTAAAAAAAA+CGG - chr1_3:49482610-49482629 Msa0122700:intron 15.0%
!!! AATAAGTTGAAAACAAATTA+CGG - chr1_3:49482687-49482706 Msa0122700:intron 15.0%
!! ATACACTAATAATAATAAAG+AGG + chr1_3:49482816-49482835 None:intergenic 15.0%
!! ATCTTAAAAGATCTATTAAT+AGG + chr1_3:49483544-49483563 None:intergenic 15.0%
!! AAATTTGTGTAAATGAATTT+AGG + chr1_3:49483790-49483809 None:intergenic 15.0%
!!! AACATGAATTTATTTTTAGA+AGG + chr1_3:49484488-49484507 None:intergenic 15.0%
!!! ACCAGTTTTATTTATTTAAT+TGG - chr1_3:49485305-49485324 Msa0122700:intron 15.0%
!! TCCAATTAAATAAATAAAAC+TGG + chr1_3:49485309-49485328 None:intergenic 15.0%
!! TTTAATTGGACTATATTAAA+AGG - chr1_3:49485319-49485338 Msa0122700:intron 15.0%
!! AATATTTGACAGATAAATAA+GGG + chr1_3:49485616-49485635 None:intergenic 15.0%
!! TAATATTTGACAGATAAATA+AGG + chr1_3:49485617-49485636 None:intergenic 15.0%
!! TTAATCACATATCTATTTAT+TGG - chr1_3:49487039-49487058 Msa0122700:intron 15.0%
!! ATTTAATAAAATATCGTATG+AGG - chr1_3:49487461-49487480 Msa0122700:CDS 15.0%
!! ATTTCATAAACTTATTTCAA+AGG + chr1_3:49487770-49487789 None:intergenic 15.0%
!! ATTCTGCTTAATATTTCATT+AGG - chr1_3:49480642-49480661 Msa0122700:CDS 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_3:49480745-49480764 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr1_3:49480822-49480841 Msa0122700:intron 20.0%
!! TACAAGTTTACTATAACAAA+TGG - chr1_3:49480984-49481003 Msa0122700:intron 20.0%
!! TTTGTCAATGATAAAGTAAA+AGG - chr1_3:49481022-49481041 Msa0122700:intron 20.0%
!! TTGTCAATGATAAAGTAAAA+GGG - chr1_3:49481023-49481042 Msa0122700:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG + chr1_3:49481122-49481141 None:intergenic 20.0%
!!! ATTGATGTTTTTGAATGATT+TGG - chr1_3:49481607-49481626 Msa0122700:intron 20.0%
!!! GAATTGGAAAAAATGATTTT+TGG - chr1_3:49481746-49481765 Msa0122700:intron 20.0%
!! CAAAATAACAATGAAGAAAA+AGG + chr1_3:49481936-49481955 None:intergenic 20.0%
!! AAACATTCAATTTGAACAAA+TGG + chr1_3:49482020-49482039 None:intergenic 20.0%
!!! ATAAGTTGAAAACAAATTAC+GGG - chr1_3:49482688-49482707 Msa0122700:intron 20.0%
!! TAGTGTATATCTTATCTTAT+TGG - chr1_3:49482828-49482847 Msa0122700:CDS 20.0%
!! AGTGTATATCTTATCTTATT+GGG - chr1_3:49482829-49482848 Msa0122700:CDS 20.0%
!!! TTACATTCTTTTTTTCACAT+TGG - chr1_3:49482865-49482884 Msa0122700:intron 20.0%
!!! TTAGCATTGATTTCAAAATA+AGG - chr1_3:49483069-49483088 Msa0122700:intron 20.0%
!!! CTTATTATTCTAGTTATGTT+GGG + chr1_3:49483221-49483240 None:intergenic 20.0%
!!! ACTTATTATTCTAGTTATGT+TGG + chr1_3:49483222-49483241 None:intergenic 20.0%
!!! TTGATATTATTTGTTGATTG+AGG - chr1_3:49483393-49483412 Msa0122700:intron 20.0%
!! AAAACTAACAATACTAACAT+TGG + chr1_3:49483977-49483996 None:intergenic 20.0%
!!! TAGTATTGTTAGTTTTTTGT+TGG - chr1_3:49483981-49484000 Msa0122700:intron 20.0%
!!! AGTATTGTTAGTTTTTTGTT+GGG - chr1_3:49483982-49484001 Msa0122700:intron 20.0%
!!! TATTAGAAGTGTTTTTTGTA+AGG + chr1_3:49484046-49484065 None:intergenic 20.0%
!! TAAAAATATACACAAGTATG+AGG + chr1_3:49484394-49484413 None:intergenic 20.0%
!! AAGAATACTAATACTGTATT+AGG - chr1_3:49484527-49484546 Msa0122700:intron 20.0%
!! TATCTTATGTCATATAGATA+AGG + chr1_3:49485081-49485100 None:intergenic 20.0%
!!! TTGTTTTAGTTCTCATAAAA+AGG - chr1_3:49485174-49485193 Msa0122700:intron 20.0%
!!! CTTTTAAAATCTTAAAAAGG+TGG - chr1_3:49485638-49485657 Msa0122700:intron 20.0%
!!! TTAGAGTATTATAGCTTTAT+AGG - chr1_3:49485739-49485758 Msa0122700:intron 20.0%
!!! ATGTGTTCAATCTTTTTATT+GGG - chr1_3:49485842-49485861 Msa0122700:intron 20.0%
!! TTAATACAAATTTAAGCACT+GGG + chr1_3:49486105-49486124 None:intergenic 20.0%
!! TGCTTAAATTTGTATTAAGA+TGG - chr1_3:49486107-49486126 Msa0122700:intron 20.0%
!! AATGTCAACAAAATATTAGT+GGG - chr1_3:49486209-49486228 Msa0122700:intron 20.0%
!! TTTATACATTTGATGTTTCT+CGG - chr1_3:49487201-49487220 Msa0122700:CDS 20.0%
!! ATTCTGCTTAATATTTCATT+AGG - chr1_3:49480642-49480661 Msa0122700:CDS 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_3:49480745-49480764 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr1_3:49480822-49480841 Msa0122700:intron 20.0%
!! TACAAGTTTACTATAACAAA+TGG - chr1_3:49480984-49481003 Msa0122700:intron 20.0%
!! TTTGTCAATGATAAAGTAAA+AGG - chr1_3:49481022-49481041 Msa0122700:intron 20.0%
!! TTGTCAATGATAAAGTAAAA+GGG - chr1_3:49481023-49481042 Msa0122700:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG + chr1_3:49481122-49481141 None:intergenic 20.0%
!!! ATTGATGTTTTTGAATGATT+TGG - chr1_3:49481607-49481626 Msa0122700:intron 20.0%
!!! GAATTGGAAAAAATGATTTT+TGG - chr1_3:49481746-49481765 Msa0122700:intron 20.0%
!! CAAAATAACAATGAAGAAAA+AGG + chr1_3:49481936-49481955 None:intergenic 20.0%
!! AAACATTCAATTTGAACAAA+TGG + chr1_3:49482020-49482039 None:intergenic 20.0%
!!! ATAAGTTGAAAACAAATTAC+GGG - chr1_3:49482688-49482707 Msa0122700:intron 20.0%
!! TAGTGTATATCTTATCTTAT+TGG - chr1_3:49482828-49482847 Msa0122700:CDS 20.0%
!! AGTGTATATCTTATCTTATT+GGG - chr1_3:49482829-49482848 Msa0122700:CDS 20.0%
!!! TTACATTCTTTTTTTCACAT+TGG - chr1_3:49482865-49482884 Msa0122700:intron 20.0%
!!! TTAGCATTGATTTCAAAATA+AGG - chr1_3:49483069-49483088 Msa0122700:intron 20.0%
!!! CTTATTATTCTAGTTATGTT+GGG + chr1_3:49483221-49483240 None:intergenic 20.0%
!!! ACTTATTATTCTAGTTATGT+TGG + chr1_3:49483222-49483241 None:intergenic 20.0%
!!! TTGATATTATTTGTTGATTG+AGG - chr1_3:49483393-49483412 Msa0122700:intron 20.0%
!! AAAACTAACAATACTAACAT+TGG + chr1_3:49483977-49483996 None:intergenic 20.0%
!!! TAGTATTGTTAGTTTTTTGT+TGG - chr1_3:49483981-49484000 Msa0122700:intron 20.0%
!!! AGTATTGTTAGTTTTTTGTT+GGG - chr1_3:49483982-49484001 Msa0122700:intron 20.0%
!!! TATTAGAAGTGTTTTTTGTA+AGG + chr1_3:49484046-49484065 None:intergenic 20.0%
!! TAAAAATATACACAAGTATG+AGG + chr1_3:49484394-49484413 None:intergenic 20.0%
!! AAGAATACTAATACTGTATT+AGG - chr1_3:49484527-49484546 Msa0122700:intron 20.0%
!! TATCTTATGTCATATAGATA+AGG + chr1_3:49485081-49485100 None:intergenic 20.0%
!!! TTGTTTTAGTTCTCATAAAA+AGG - chr1_3:49485174-49485193 Msa0122700:intron 20.0%
!!! CTTTTAAAATCTTAAAAAGG+TGG - chr1_3:49485638-49485657 Msa0122700:intron 20.0%
!!! TTAGAGTATTATAGCTTTAT+AGG - chr1_3:49485739-49485758 Msa0122700:intron 20.0%
!!! ATGTGTTCAATCTTTTTATT+GGG - chr1_3:49485842-49485861 Msa0122700:intron 20.0%
!! TTAATACAAATTTAAGCACT+GGG + chr1_3:49486105-49486124 None:intergenic 20.0%
!! TGCTTAAATTTGTATTAAGA+TGG - chr1_3:49486107-49486126 Msa0122700:intron 20.0%
!! AATGTCAACAAAATATTAGT+GGG - chr1_3:49486209-49486228 Msa0122700:intron 20.0%
!! TTTATACATTTGATGTTTCT+CGG - chr1_3:49487201-49487220 Msa0122700:CDS 20.0%
! TAGTTTCAAAAGCAATACTT+TGG + chr1_3:49480808-49480827 None:intergenic 25.0%
! AAGTTTACTATAACAAATGG+AGG - chr1_3:49480987-49481006 Msa0122700:intron 25.0%
! AGGGTTTCAACTAATTATTA+AGG - chr1_3:49481042-49481061 Msa0122700:intron 25.0%
! TTAATCAAATGTGACCTATT+TGG - chr1_3:49481105-49481124 Msa0122700:intron 25.0%
! AACGGCTTTCATATAAAATA+AGG - chr1_3:49481198-49481217 Msa0122700:intron 25.0%
! TCATATAAAATAAGGTGGTT+TGG - chr1_3:49481206-49481225 Msa0122700:intron 25.0%
!! AAAATCAACTTATGACTTGT+TGG - chr1_3:49481691-49481710 Msa0122700:intron 25.0%
!!! TTGGAAAAAATGATTTTTGG+AGG - chr1_3:49481749-49481768 Msa0122700:intron 25.0%
! AATAACAATGAAGAAAAAGG+TGG + chr1_3:49481933-49481952 None:intergenic 25.0%
! TCAATTTGAACAAATGGTTT+GGG + chr1_3:49482014-49482033 None:intergenic 25.0%
! TTCAATTTGAACAAATGGTT+TGG + chr1_3:49482015-49482034 None:intergenic 25.0%
! GTTCAAATTGAATGTTTGAT+AGG - chr1_3:49482023-49482042 Msa0122700:intron 25.0%
!! TTATTCTTTTGTCTTTCTTG+AGG - chr1_3:49483009-49483028 Msa0122700:intron 25.0%
!! GGATGGTTTTCAATAAAAAA+TGG + chr1_3:49483454-49483473 None:intergenic 25.0%
! GTTTAAATCTCATTCAAAAC+AGG + chr1_3:49483475-49483494 None:intergenic 25.0%
!!! TGCTTTTTTACTAGATTGTA+TGG - chr1_3:49483585-49483604 Msa0122700:intron 25.0%
!!! GCTTTTTTACTAGATTGTAT+GGG - chr1_3:49483586-49483605 Msa0122700:intron 25.0%
! ATAATTGCAAAAAACCATAG+AGG - chr1_3:49484063-49484082 Msa0122700:intron 25.0%
!!! ATGTCTTATCATTTTTTGTG+AGG + chr1_3:49485152-49485171 None:intergenic 25.0%
! TTAAAATCTTAAAAAGGTGG+AGG - chr1_3:49485641-49485660 Msa0122700:intron 25.0%
! TAAAATCTTAAAAAGGTGGA+GGG - chr1_3:49485642-49485661 Msa0122700:intron 25.0%
!!! CTCTAAAATTGCTAAAGTAT+AGG + chr1_3:49485725-49485744 None:intergenic 25.0%
!! ATATGTGTTTGAAATAGTGA+CGG + chr1_3:49485809-49485828 None:intergenic 25.0%
!! GATGTGTTCAATCTTTTTAT+TGG - chr1_3:49485841-49485860 Msa0122700:intron 25.0%
! CATATTAGAAGATTAGAATG+TGG + chr1_3:49485997-49486016 None:intergenic 25.0%
! CTTAATACAAATTTAAGCAC+TGG + chr1_3:49486106-49486125 None:intergenic 25.0%
! CAATGTCAACAAAATATTAG+TGG - chr1_3:49486208-49486227 Msa0122700:intron 25.0%
! ATGTCAACAAAATATTAGTG+GGG - chr1_3:49486210-49486229 Msa0122700:intron 25.0%
! AACTAATATGAATGTAGATG+AGG - chr1_3:49486520-49486539 Msa0122700:CDS 25.0%
! AATCCATCATAACAAAAGAA+AGG + chr1_3:49486621-49486640 None:intergenic 25.0%
!! CTTTGCGCTAAATTTTTATT+TGG - chr1_3:49486780-49486799 Msa0122700:CDS 25.0%
!!! ATTTTACAGTTGCTACTTAT+TGG - chr1_3:49486978-49486997 Msa0122700:CDS 25.0%
!!! TTTTACAGTTGCTACTTATT+GGG - chr1_3:49486979-49486998 Msa0122700:CDS 25.0%
!! ATTTTCCCTTTTCTTTTTTC+AGG - chr1_3:49487086-49487105 Msa0122700:intron 25.0%
! TTCATAAAAGAATCCATGTT+TGG + chr1_3:49487427-49487446 None:intergenic 25.0%
!!! TGATTTTTTTTTTCCCTCAA+AGG - chr1_3:49487515-49487534 Msa0122700:intron 25.0%
!!! GAACTCAAATTTTGTTGTTT+AGG - chr1_3:49487648-49487667 Msa0122700:intron 25.0%
! AGATGAATGAGAATGTTAAA+TGG + chr1_3:49487970-49487989 None:intergenic 25.0%
! TGAAATTCTAGGTTATAGAA+AGG - chr1_3:49488064-49488083 Msa0122700:intron 25.0%
! GAAATTCTAGGTTATAGAAA+GGG - chr1_3:49488065-49488084 Msa0122700:intron 25.0%
! AAATTCTAGGTTATAGAAAG+GGG - chr1_3:49488066-49488085 Msa0122700:intron 25.0%
! TAGTTTCAAAAGCAATACTT+TGG + chr1_3:49480808-49480827 None:intergenic 25.0%
! AAGTTTACTATAACAAATGG+AGG - chr1_3:49480987-49481006 Msa0122700:intron 25.0%
! AGGGTTTCAACTAATTATTA+AGG - chr1_3:49481042-49481061 Msa0122700:intron 25.0%
! TTAATCAAATGTGACCTATT+TGG - chr1_3:49481105-49481124 Msa0122700:intron 25.0%
! AACGGCTTTCATATAAAATA+AGG - chr1_3:49481198-49481217 Msa0122700:intron 25.0%
! TCATATAAAATAAGGTGGTT+TGG - chr1_3:49481206-49481225 Msa0122700:intron 25.0%
!! AAAATCAACTTATGACTTGT+TGG - chr1_3:49481691-49481710 Msa0122700:intron 25.0%
!!! TTGGAAAAAATGATTTTTGG+AGG - chr1_3:49481749-49481768 Msa0122700:intron 25.0%
! AATAACAATGAAGAAAAAGG+TGG + chr1_3:49481933-49481952 None:intergenic 25.0%
! TCAATTTGAACAAATGGTTT+GGG + chr1_3:49482014-49482033 None:intergenic 25.0%
! TTCAATTTGAACAAATGGTT+TGG + chr1_3:49482015-49482034 None:intergenic 25.0%
! GTTCAAATTGAATGTTTGAT+AGG - chr1_3:49482023-49482042 Msa0122700:intron 25.0%
!! TTATTCTTTTGTCTTTCTTG+AGG - chr1_3:49483009-49483028 Msa0122700:intron 25.0%
!! GGATGGTTTTCAATAAAAAA+TGG + chr1_3:49483454-49483473 None:intergenic 25.0%
! GTTTAAATCTCATTCAAAAC+AGG + chr1_3:49483475-49483494 None:intergenic 25.0%
!!! TGCTTTTTTACTAGATTGTA+TGG - chr1_3:49483585-49483604 Msa0122700:intron 25.0%
!!! GCTTTTTTACTAGATTGTAT+GGG - chr1_3:49483586-49483605 Msa0122700:intron 25.0%
! ATAATTGCAAAAAACCATAG+AGG - chr1_3:49484063-49484082 Msa0122700:intron 25.0%
!!! ATGTCTTATCATTTTTTGTG+AGG + chr1_3:49485152-49485171 None:intergenic 25.0%
! TTAAAATCTTAAAAAGGTGG+AGG - chr1_3:49485641-49485660 Msa0122700:intron 25.0%
! TAAAATCTTAAAAAGGTGGA+GGG - chr1_3:49485642-49485661 Msa0122700:intron 25.0%
!!! CTCTAAAATTGCTAAAGTAT+AGG + chr1_3:49485725-49485744 None:intergenic 25.0%
!! ATATGTGTTTGAAATAGTGA+CGG + chr1_3:49485809-49485828 None:intergenic 25.0%
!! GATGTGTTCAATCTTTTTAT+TGG - chr1_3:49485841-49485860 Msa0122700:intron 25.0%
! CATATTAGAAGATTAGAATG+TGG + chr1_3:49485997-49486016 None:intergenic 25.0%
! CTTAATACAAATTTAAGCAC+TGG + chr1_3:49486106-49486125 None:intergenic 25.0%
! CAATGTCAACAAAATATTAG+TGG - chr1_3:49486208-49486227 Msa0122700:intron 25.0%
! ATGTCAACAAAATATTAGTG+GGG - chr1_3:49486210-49486229 Msa0122700:intron 25.0%
! AACTAATATGAATGTAGATG+AGG - chr1_3:49486520-49486539 Msa0122700:CDS 25.0%
! AATCCATCATAACAAAAGAA+AGG + chr1_3:49486621-49486640 None:intergenic 25.0%
!! CTTTGCGCTAAATTTTTATT+TGG - chr1_3:49486780-49486799 Msa0122700:CDS 25.0%
!!! ATTTTACAGTTGCTACTTAT+TGG - chr1_3:49486978-49486997 Msa0122700:CDS 25.0%
!!! TTTTACAGTTGCTACTTATT+GGG - chr1_3:49486979-49486998 Msa0122700:CDS 25.0%
!! ATTTTCCCTTTTCTTTTTTC+AGG - chr1_3:49487086-49487105 Msa0122700:intron 25.0%
! TTCATAAAAGAATCCATGTT+TGG + chr1_3:49487427-49487446 None:intergenic 25.0%
!!! TGATTTTTTTTTTCCCTCAA+AGG - chr1_3:49487515-49487534 Msa0122700:intron 25.0%
!!! GAACTCAAATTTTGTTGTTT+AGG - chr1_3:49487648-49487667 Msa0122700:intron 25.0%
! AGATGAATGAGAATGTTAAA+TGG + chr1_3:49487970-49487989 None:intergenic 25.0%
! TGAAATTCTAGGTTATAGAA+AGG - chr1_3:49488064-49488083 Msa0122700:intron 25.0%
! GAAATTCTAGGTTATAGAAA+GGG - chr1_3:49488065-49488084 Msa0122700:intron 25.0%
! AAATTCTAGGTTATAGAAAG+GGG - chr1_3:49488066-49488085 Msa0122700:intron 25.0%
CTTGATTAGGTAATCGTAAT+CGG + chr1_3:49480555-49480574 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr1_3:49480913-49480932 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:49480914-49480933 Msa0122700:intron 30.0%
GGCTTTCATATAAAATAAGG+TGG - chr1_3:49481201-49481220 Msa0122700:intron 30.0%
! TATAAAATAAGGTGGTTTGG+TGG - chr1_3:49481209-49481228 Msa0122700:intron 30.0%
!! ATAAAATAAGGTGGTTTGGT+GGG - chr1_3:49481210-49481229 Msa0122700:intron 30.0%
TCCTTGTCAAAAAGTTTGAT+CGG - chr1_3:49481320-49481339 Msa0122700:intron 30.0%
TTTGTGTTGGAAAATGATCT+AGG - chr1_3:49481722-49481741 Msa0122700:intron 30.0%
!!! GATAAGATTTTGAGATGGAT+AGG - chr1_3:49481970-49481989 Msa0122700:intron 30.0%
! AATTTGAACAAATGGTTTGG+GGG + chr1_3:49482012-49482031 None:intergenic 30.0%
CAATTTGAACAAATGGTTTG+GGG + chr1_3:49482013-49482032 None:intergenic 30.0%
GATGTGCTCAAAATAAAAAG+TGG - chr1_3:49482045-49482064 Msa0122700:intron 30.0%
! AAAGTGGAAAAAAAGGGTTT+TGG - chr1_3:49482061-49482080 Msa0122700:intron 30.0%
!!! AAAAAGGGTTTTGGCTTATT+TGG - chr1_3:49482070-49482089 Msa0122700:intron 30.0%
! TGATTTGGAGTATGAGAAAT+AGG - chr1_3:49482109-49482128 Msa0122700:intron 30.0%
! TTTCAAGAATCGAGATTTTG+AGG - chr1_3:49482137-49482156 Msa0122700:CDS 30.0%
TTTCATTCATAGAACATGCA+TGG + chr1_3:49482231-49482250 None:intergenic 30.0%
GCATGTTCTATGAATGAAAT+TGG - chr1_3:49482232-49482251 Msa0122700:intron 30.0%
CTATGAATGAAATTGGTGTA+CGG - chr1_3:49482239-49482258 Msa0122700:intron 30.0%
TATGAATGAAATTGGTGTAC+GGG - chr1_3:49482240-49482259 Msa0122700:intron 30.0%
!!! TTCTTTTTCAGTGCTGTTTT+GGG - chr1_3:49482305-49482324 Msa0122700:CDS 30.0%
! TGATGTGTTTTCCTCTTTTT+TGG - chr1_3:49482400-49482419 Msa0122700:intron 30.0%
AGCTATATGAAAACCTAGTA+CGG + chr1_3:49482648-49482667 None:intergenic 30.0%
ATAATAAAGAGGAGAAAGAG+AGG + chr1_3:49482805-49482824 None:intergenic 30.0%
!!! ATTCTTTTTTTCACATTGGC+AGG - chr1_3:49482869-49482888 Msa0122700:intron 30.0%
!!! ACTAGTTTTATCACAACCAT+CGG - chr1_3:49482941-49482960 Msa0122700:intron 30.0%
! TTATTCTAGTTATGTTGGGA+AGG + chr1_3:49483217-49483236 None:intergenic 30.0%
AATAAGTGAGAGCTTAATTG+TGG - chr1_3:49483235-49483254 Msa0122700:intron 30.0%
TTAGCAAGTTAGAGAAGAAA+GGG + chr1_3:49483430-49483449 None:intergenic 30.0%
TTTAGCAAGTTAGAGAAGAA+AGG + chr1_3:49483431-49483450 None:intergenic 30.0%
AAATCTCATTCAAAACAGGA+TGG + chr1_3:49483471-49483490 None:intergenic 30.0%
TTATACATTGATCTGGCAAA+TGG + chr1_3:49483500-49483519 None:intergenic 30.0%
ATTTGCCAGATCAATGTATA+AGG - chr1_3:49483499-49483518 Msa0122700:intron 30.0%
! TATAAGGTACCTGATATGAT+TGG - chr1_3:49483515-49483534 Msa0122700:intron 30.0%
! TAGTTCTACTATATGAAGCT+CGG - chr1_3:49483732-49483751 Msa0122700:intron 30.0%
ACAACATGAACGATATTAGA+TGG - chr1_3:49483764-49483783 Msa0122700:intron 30.0%
AGAGTAAAAATATGCCTCTA+TGG + chr1_3:49484080-49484099 None:intergenic 30.0%
GGTCTAGACTTAGTTTAAAT+AGG + chr1_3:49484198-49484217 None:intergenic 30.0%
! TTCTTTTCAATCTTTAGCCA+TGG - chr1_3:49484783-49484802 Msa0122700:intron 30.0%
CAATGAAAGCAACTAGTTAA+AGG - chr1_3:49484920-49484939 Msa0122700:intron 30.0%
ATTCCTAATAAACAAGACCA+AGG - chr1_3:49485035-49485054 Msa0122700:intron 30.0%
TTCCTAATAAACAAGACCAA+GGG - chr1_3:49485036-49485055 Msa0122700:intron 30.0%
TTTGTGAGGATCATTATCAT+AGG + chr1_3:49485138-49485157 None:intergenic 30.0%
!! CTGTTTTGGATGATGATAAT+GGG + chr1_3:49485377-49485396 None:intergenic 30.0%
AATTTGCCAATTCAAGAAGT+TGG - chr1_3:49485413-49485432 Msa0122700:intron 30.0%
! ATGTTTGATGATATGGAAAG+AGG + chr1_3:49485499-49485518 None:intergenic 30.0%
CAGTTATGCTCATAATTTGA+GGG - chr1_3:49485539-49485558 Msa0122700:intron 30.0%
!! TACTTTTTGGATACTGATCT+AGG - chr1_3:49485665-49485684 Msa0122700:intron 30.0%
!! CTAGGAGTATTATATGCATA+CGG - chr1_3:49485683-49485702 Msa0122700:intron 30.0%
!! TAGGAGTATTATATGCATAC+GGG - chr1_3:49485684-49485703 Msa0122700:intron 30.0%
ATTATATGCATACGGGAATA+CGG - chr1_3:49485691-49485710 Msa0122700:intron 30.0%
TTGTCAATATCAGTGCATAT+TGG - chr1_3:49485768-49485787 Msa0122700:CDS 30.0%
TGTCAATATCAGTGCATATT+GGG - chr1_3:49485769-49485788 Msa0122700:CDS 30.0%
ACTGTTAAAAGATGACTCAT+CGG + chr1_3:49485916-49485935 None:intergenic 30.0%
AGGAAATAATAAAGGAGGAA+TGG + chr1_3:49485974-49485993 None:intergenic 30.0%
GAATGTGGAGGAAATAATAA+AGG + chr1_3:49485982-49486001 None:intergenic 30.0%
ATTAGAAGATTAGAATGTGG+AGG + chr1_3:49485994-49486013 None:intergenic 30.0%
TTTAAATCCACACGAATCAT+TGG - chr1_3:49486025-49486044 Msa0122700:intron 30.0%
!! ATTGGAACAAGTGTTTTTGT+CGG - chr1_3:49486043-49486062 Msa0122700:intron 30.0%
! TACTTTTCAACTGTGTACTT+TGG - chr1_3:49486073-49486092 Msa0122700:intron 30.0%
! ACTTTTCAACTGTGTACTTT+GGG - chr1_3:49486074-49486093 Msa0122700:intron 30.0%
CATATCCAGACATCAAAAAT+TGG - chr1_3:49486156-49486175 Msa0122700:intron 30.0%
TACTGGAAATTATTCTCCTT+AGG - chr1_3:49486345-49486364 Msa0122700:CDS 30.0%
ACTCTGCATAAACATAATCT+CGG + chr1_3:49486495-49486514 None:intergenic 30.0%
!! CAACCTTTCTTTTGTTATGA+TGG - chr1_3:49486615-49486634 Msa0122700:CDS 30.0%
AAAGAAAACCAGCAATATCA+AGG + chr1_3:49486719-49486738 None:intergenic 30.0%
CTACTATTATGTTGCATGTT+TGG - chr1_3:49486745-49486764 Msa0122700:intron 30.0%
TTGGTTAATCTTGAGTGTTT+GGG + chr1_3:49486817-49486836 None:intergenic 30.0%
ATTAATTTCCCAACATAGGA+AGG + chr1_3:49487024-49487043 None:intergenic 30.0%
TGTGATTAATTTCCCAACAT+AGG + chr1_3:49487028-49487047 None:intergenic 30.0%
TACGAAGCTTAGCAATATAT+TGG + chr1_3:49487170-49487189 None:intergenic 30.0%
TGATCAGTTACACTTTAGAT+GGG + chr1_3:49487370-49487389 None:intergenic 30.0%
ATGATCAGTTACACTTTAGA+TGG + chr1_3:49487371-49487390 None:intergenic 30.0%
TTGTAGTTATGAACCTTTGA+GGG + chr1_3:49487531-49487550 None:intergenic 30.0%
ATTGTAGTTATGAACCTTTG+AGG + chr1_3:49487532-49487551 None:intergenic 30.0%
! CTTAAATCATCTTGTTTCAC+AGG - chr1_3:49487597-49487616 Msa0122700:intron 30.0%
TTGCACTGCTTAAAATTGAT+GGG + chr1_3:49487695-49487714 None:intergenic 30.0%
TTTGCACTGCTTAAAATTGA+TGG + chr1_3:49487696-49487715 None:intergenic 30.0%
CGATGCTCAAATATATAGTT+TGG + chr1_3:49487925-49487944 None:intergenic 30.0%
ATGGAGAAAATAGATGCAAA+AGG + chr1_3:49487951-49487970 None:intergenic 30.0%
! TGTTGATAGATACTCTACAA+GGG - chr1_3:49488041-49488060 Msa0122700:intron 30.0%
CTTGATTAGGTAATCGTAAT+CGG + chr1_3:49480555-49480574 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr1_3:49480913-49480932 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:49480914-49480933 Msa0122700:intron 30.0%
GGCTTTCATATAAAATAAGG+TGG - chr1_3:49481201-49481220 Msa0122700:intron 30.0%
! TATAAAATAAGGTGGTTTGG+TGG - chr1_3:49481209-49481228 Msa0122700:intron 30.0%
!! ATAAAATAAGGTGGTTTGGT+GGG - chr1_3:49481210-49481229 Msa0122700:intron 30.0%
TCCTTGTCAAAAAGTTTGAT+CGG - chr1_3:49481320-49481339 Msa0122700:intron 30.0%
TTTGTGTTGGAAAATGATCT+AGG - chr1_3:49481722-49481741 Msa0122700:intron 30.0%
!!! GATAAGATTTTGAGATGGAT+AGG - chr1_3:49481970-49481989 Msa0122700:intron 30.0%
! AATTTGAACAAATGGTTTGG+GGG + chr1_3:49482012-49482031 None:intergenic 30.0%
CAATTTGAACAAATGGTTTG+GGG + chr1_3:49482013-49482032 None:intergenic 30.0%
GATGTGCTCAAAATAAAAAG+TGG - chr1_3:49482045-49482064 Msa0122700:intron 30.0%
! AAAGTGGAAAAAAAGGGTTT+TGG - chr1_3:49482061-49482080 Msa0122700:intron 30.0%
!!! AAAAAGGGTTTTGGCTTATT+TGG - chr1_3:49482070-49482089 Msa0122700:intron 30.0%
! TGATTTGGAGTATGAGAAAT+AGG - chr1_3:49482109-49482128 Msa0122700:intron 30.0%
! TTTCAAGAATCGAGATTTTG+AGG - chr1_3:49482137-49482156 Msa0122700:CDS 30.0%
TTTCATTCATAGAACATGCA+TGG + chr1_3:49482231-49482250 None:intergenic 30.0%
GCATGTTCTATGAATGAAAT+TGG - chr1_3:49482232-49482251 Msa0122700:intron 30.0%
CTATGAATGAAATTGGTGTA+CGG - chr1_3:49482239-49482258 Msa0122700:intron 30.0%
TATGAATGAAATTGGTGTAC+GGG - chr1_3:49482240-49482259 Msa0122700:intron 30.0%
!!! TTCTTTTTCAGTGCTGTTTT+GGG - chr1_3:49482305-49482324 Msa0122700:CDS 30.0%
! TGATGTGTTTTCCTCTTTTT+TGG - chr1_3:49482400-49482419 Msa0122700:intron 30.0%
AGCTATATGAAAACCTAGTA+CGG + chr1_3:49482648-49482667 None:intergenic 30.0%
ATAATAAAGAGGAGAAAGAG+AGG + chr1_3:49482805-49482824 None:intergenic 30.0%
!!! ATTCTTTTTTTCACATTGGC+AGG - chr1_3:49482869-49482888 Msa0122700:intron 30.0%
!!! ACTAGTTTTATCACAACCAT+CGG - chr1_3:49482941-49482960 Msa0122700:intron 30.0%
! TTATTCTAGTTATGTTGGGA+AGG + chr1_3:49483217-49483236 None:intergenic 30.0%
AATAAGTGAGAGCTTAATTG+TGG - chr1_3:49483235-49483254 Msa0122700:intron 30.0%
TTAGCAAGTTAGAGAAGAAA+GGG + chr1_3:49483430-49483449 None:intergenic 30.0%
TTTAGCAAGTTAGAGAAGAA+AGG + chr1_3:49483431-49483450 None:intergenic 30.0%
AAATCTCATTCAAAACAGGA+TGG + chr1_3:49483471-49483490 None:intergenic 30.0%
TTATACATTGATCTGGCAAA+TGG + chr1_3:49483500-49483519 None:intergenic 30.0%
ATTTGCCAGATCAATGTATA+AGG - chr1_3:49483499-49483518 Msa0122700:intron 30.0%
! TATAAGGTACCTGATATGAT+TGG - chr1_3:49483515-49483534 Msa0122700:intron 30.0%
! TAGTTCTACTATATGAAGCT+CGG - chr1_3:49483732-49483751 Msa0122700:intron 30.0%
ACAACATGAACGATATTAGA+TGG - chr1_3:49483764-49483783 Msa0122700:intron 30.0%
AGAGTAAAAATATGCCTCTA+TGG + chr1_3:49484080-49484099 None:intergenic 30.0%
GGTCTAGACTTAGTTTAAAT+AGG + chr1_3:49484198-49484217 None:intergenic 30.0%
! TTCTTTTCAATCTTTAGCCA+TGG - chr1_3:49484783-49484802 Msa0122700:intron 30.0%
CAATGAAAGCAACTAGTTAA+AGG - chr1_3:49484920-49484939 Msa0122700:intron 30.0%
ATTCCTAATAAACAAGACCA+AGG - chr1_3:49485035-49485054 Msa0122700:intron 30.0%
TTCCTAATAAACAAGACCAA+GGG - chr1_3:49485036-49485055 Msa0122700:intron 30.0%
TTTGTGAGGATCATTATCAT+AGG + chr1_3:49485138-49485157 None:intergenic 30.0%
!! CTGTTTTGGATGATGATAAT+GGG + chr1_3:49485377-49485396 None:intergenic 30.0%
AATTTGCCAATTCAAGAAGT+TGG - chr1_3:49485413-49485432 Msa0122700:intron 30.0%
! ATGTTTGATGATATGGAAAG+AGG + chr1_3:49485499-49485518 None:intergenic 30.0%
CAGTTATGCTCATAATTTGA+GGG - chr1_3:49485539-49485558 Msa0122700:intron 30.0%
!! TACTTTTTGGATACTGATCT+AGG - chr1_3:49485665-49485684 Msa0122700:intron 30.0%
!! CTAGGAGTATTATATGCATA+CGG - chr1_3:49485683-49485702 Msa0122700:intron 30.0%
!! TAGGAGTATTATATGCATAC+GGG - chr1_3:49485684-49485703 Msa0122700:intron 30.0%
ATTATATGCATACGGGAATA+CGG - chr1_3:49485691-49485710 Msa0122700:intron 30.0%
TTGTCAATATCAGTGCATAT+TGG - chr1_3:49485768-49485787 Msa0122700:CDS 30.0%
TGTCAATATCAGTGCATATT+GGG - chr1_3:49485769-49485788 Msa0122700:CDS 30.0%
ACTGTTAAAAGATGACTCAT+CGG + chr1_3:49485916-49485935 None:intergenic 30.0%
AGGAAATAATAAAGGAGGAA+TGG + chr1_3:49485974-49485993 None:intergenic 30.0%
GAATGTGGAGGAAATAATAA+AGG + chr1_3:49485982-49486001 None:intergenic 30.0%
ATTAGAAGATTAGAATGTGG+AGG + chr1_3:49485994-49486013 None:intergenic 30.0%
TTTAAATCCACACGAATCAT+TGG - chr1_3:49486025-49486044 Msa0122700:intron 30.0%
!! ATTGGAACAAGTGTTTTTGT+CGG - chr1_3:49486043-49486062 Msa0122700:intron 30.0%
! TACTTTTCAACTGTGTACTT+TGG - chr1_3:49486073-49486092 Msa0122700:intron 30.0%
! ACTTTTCAACTGTGTACTTT+GGG - chr1_3:49486074-49486093 Msa0122700:intron 30.0%
CATATCCAGACATCAAAAAT+TGG - chr1_3:49486156-49486175 Msa0122700:intron 30.0%
TACTGGAAATTATTCTCCTT+AGG - chr1_3:49486345-49486364 Msa0122700:CDS 30.0%
ACTCTGCATAAACATAATCT+CGG + chr1_3:49486495-49486514 None:intergenic 30.0%
!! CAACCTTTCTTTTGTTATGA+TGG - chr1_3:49486615-49486634 Msa0122700:CDS 30.0%
AAAGAAAACCAGCAATATCA+AGG + chr1_3:49486719-49486738 None:intergenic 30.0%
CTACTATTATGTTGCATGTT+TGG - chr1_3:49486745-49486764 Msa0122700:intron 30.0%
TTGGTTAATCTTGAGTGTTT+GGG + chr1_3:49486817-49486836 None:intergenic 30.0%
ATTAATTTCCCAACATAGGA+AGG + chr1_3:49487024-49487043 None:intergenic 30.0%
TGTGATTAATTTCCCAACAT+AGG + chr1_3:49487028-49487047 None:intergenic 30.0%
TACGAAGCTTAGCAATATAT+TGG + chr1_3:49487170-49487189 None:intergenic 30.0%
TGATCAGTTACACTTTAGAT+GGG + chr1_3:49487370-49487389 None:intergenic 30.0%
ATGATCAGTTACACTTTAGA+TGG + chr1_3:49487371-49487390 None:intergenic 30.0%
TTGTAGTTATGAACCTTTGA+GGG + chr1_3:49487531-49487550 None:intergenic 30.0%
ATTGTAGTTATGAACCTTTG+AGG + chr1_3:49487532-49487551 None:intergenic 30.0%
! CTTAAATCATCTTGTTTCAC+AGG - chr1_3:49487597-49487616 Msa0122700:intron 30.0%
TTGCACTGCTTAAAATTGAT+GGG + chr1_3:49487695-49487714 None:intergenic 30.0%
TTTGCACTGCTTAAAATTGA+TGG + chr1_3:49487696-49487715 None:intergenic 30.0%
CGATGCTCAAATATATAGTT+TGG + chr1_3:49487925-49487944 None:intergenic 30.0%
ATGGAGAAAATAGATGCAAA+AGG + chr1_3:49487951-49487970 None:intergenic 30.0%
! TGTTGATAGATACTCTACAA+GGG - chr1_3:49488041-49488060 Msa0122700:intron 30.0%
!!! GACACTCATTTTGAAACAGA+GGG + chr1_3:49480675-49480694 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr1_3:49480779-49480798 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr1_3:49480783-49480802 None:intergenic 35.0%
! ACTTGAGTCTTTTGGCAAAA+TGG - chr1_3:49481254-49481273 Msa0122700:intron 35.0%
TACAACATGATTCTCCTTTG+TGG - chr1_3:49481290-49481309 Msa0122700:intron 35.0%
! ACAAGGACATTTTTCCACAA+AGG + chr1_3:49481307-49481326 None:intergenic 35.0%
! TCCGATCAAACTTTTTGACA+AGG + chr1_3:49481324-49481343 None:intergenic 35.0%
! GTGGAGAGATTTAACTTCAT+TGG - chr1_3:49481378-49481397 Msa0122700:intron 35.0%
! GAGAGATTTAACTTCATTGG+AGG - chr1_3:49481381-49481400 Msa0122700:intron 35.0%
TCATTGGAGGATTCAGTATT+CGG - chr1_3:49481394-49481413 Msa0122700:intron 35.0%
! AAGTTTGTGATCTTTTCCTG+CGG - chr1_3:49481453-49481472 Msa0122700:intron 35.0%
!! GCTTGCTATTACAGATAGAA+AGG - chr1_3:49481478-49481497 Msa0122700:intron 35.0%
AGTGAGGTTTGTGTTAGAAA+TGG - chr1_3:49481512-49481531 Msa0122700:intron 35.0%
GTGAGGTTTGTGTTAGAAAT+GGG - chr1_3:49481513-49481532 Msa0122700:intron 35.0%
TGAGGTTTGTGTTAGAAATG+GGG - chr1_3:49481514-49481533 Msa0122700:intron 35.0%
!! GAGAAGGTTGTTGTTTGTAT+GGG - chr1_3:49481562-49481581 Msa0122700:CDS 35.0%
AAATACCGAGAGAGATAGTT+GGG - chr1_3:49481634-49481653 Msa0122700:intron 35.0%
!! ATCAACTTATGACTTGTTGG+AGG - chr1_3:49481694-49481713 Msa0122700:intron 35.0%
!! TCAACTTATGACTTGTTGGA+GGG - chr1_3:49481695-49481714 Msa0122700:intron 35.0%
GGAAAATGATCTAGGTGAAT+TGG - chr1_3:49481730-49481749 Msa0122700:intron 35.0%
!! AAATGATTTTTGGAGGCCTT+TGG - chr1_3:49481756-49481775 Msa0122700:intron 35.0%
! CCTTTTCCACAAATTATTCC+GGG + chr1_3:49481845-49481864 None:intergenic 35.0%
! GCCTTTTCCACAAATTATTC+CGG + chr1_3:49481846-49481865 None:intergenic 35.0%
!!! AGATTTTGAGGTTGATGCAA+TGG - chr1_3:49482149-49482168 Msa0122700:CDS 35.0%
AGGAAATCAAAGTCCTCTTA+TGG - chr1_3:49482175-49482194 Msa0122700:CDS 35.0%
!!! GTTCTTTTTCAGTGCTGTTT+TGG - chr1_3:49482304-49482323 Msa0122700:CDS 35.0%
!!! TCTTTTTCAGTGCTGTTTTG+GGG - chr1_3:49482306-49482325 Msa0122700:CDS 35.0%
!!! GTGTTTTCCTCTTTTTTGGA+CGG - chr1_3:49482404-49482423 Msa0122700:intron 35.0%
!!! TGTTTTCCTCTTTTTTGGAC+GGG - chr1_3:49482405-49482424 Msa0122700:intron 35.0%
TGTTGTTCCAGTATCAGTTT+AGG - chr1_3:49482500-49482519 Msa0122700:CDS 35.0%
GTTGTTCCAGTATCAGTTTA+GGG - chr1_3:49482501-49482520 Msa0122700:CDS 35.0%
! GTTTTCATTTAAGCCGTACT+AGG - chr1_3:49482632-49482651 Msa0122700:intron 35.0%
! AGGTTTTCATATAGCTATCC+TGG - chr1_3:49482652-49482671 Msa0122700:intron 35.0%
! GGTTTTCATATAGCTATCCT+GGG - chr1_3:49482653-49482672 Msa0122700:intron 35.0%
! ATGATTTTTGTGAGAGCTTG+TGG + chr1_3:49482731-49482750 None:intergenic 35.0%
ATCATCATAAGTGCGAATGT+CGG - chr1_3:49482746-49482765 Msa0122700:intron 35.0%
AGGAGATAATAAGGCATGTT+TGG + chr1_3:49482785-49482804 None:intergenic 35.0%
GAGAAAGAGAGGAGATAATA+AGG + chr1_3:49482794-49482813 None:intergenic 35.0%
CATCTGAGAAACGTAATAGA+AGG + chr1_3:49482910-49482929 None:intergenic 35.0%
CTTCTATTACGTTTCTCAGA+TGG - chr1_3:49482908-49482927 Msa0122700:intron 35.0%
!!! CTAGTTTTATCACAACCATC+GGG - chr1_3:49482942-49482961 Msa0122700:intron 35.0%
! TTTTGTCTTTCTTGAGGAGA+TGG - chr1_3:49483015-49483034 Msa0122700:intron 35.0%
AACCCATTCTAGTAAGTACA+GGG + chr1_3:49483041-49483060 None:intergenic 35.0%
TAACCCATTCTAGTAAGTAC+AGG + chr1_3:49483042-49483061 None:intergenic 35.0%
! AGCGAATCAAGTTGCAAATA+TGG - chr1_3:49483111-49483130 Msa0122700:intron 35.0%
! GCGAATCAAGTTGCAAATAT+GGG - chr1_3:49483112-49483131 Msa0122700:intron 35.0%
CTGAAACTAACCAGTTGTAA+TGG + chr1_3:49483165-49483184 None:intergenic 35.0%
ATCCAATGTGCAAGAATAGA+AGG + chr1_3:49483342-49483361 None:intergenic 35.0%
TCTATTCTTGCACATTGGAT+AGG - chr1_3:49483342-49483361 Msa0122700:intron 35.0%
AGGTACCTTATACATTGATC+TGG + chr1_3:49483507-49483526 None:intergenic 35.0%
! TTTTACTAGATTGTATGGGC+TGG - chr1_3:49483590-49483609 Msa0122700:intron 35.0%
GCTGGATCTCTTTATTAGAT+TGG - chr1_3:49483608-49483627 Msa0122700:intron 35.0%
! ATAATTAGTGGGTACAACAC+CGG + chr1_3:49483690-49483709 None:intergenic 35.0%
CGTGTAAGGTGATAATTAGT+GGG + chr1_3:49483701-49483720 None:intergenic 35.0%
ACGTGTAAGGTGATAATTAG+TGG + chr1_3:49483702-49483721 None:intergenic 35.0%
!!! TGTTAGTTTTTTGTTGGGAG+TGG - chr1_3:49483987-49484006 Msa0122700:intron 35.0%
!!! GTTAGTTTTTTGTTGGGAGT+GGG - chr1_3:49483988-49484007 Msa0122700:intron 35.0%
!!! TTAGTTTTTTGTTGGGAGTG+GGG - chr1_3:49483989-49484008 Msa0122700:intron 35.0%
TACATTTATGACACGTCACA+AGG + chr1_3:49484129-49484148 None:intergenic 35.0%
!! TGACATTTTGACAGTGGTTA+GGG + chr1_3:49484160-49484179 None:intergenic 35.0%
!! ACTTTGTGACATTTTGACAG+TGG + chr1_3:49484166-49484185 None:intergenic 35.0%
CTTAGTTTAAATAGGAGCAG+TGG + chr1_3:49484190-49484209 None:intergenic 35.0%
TGTCAAAGTCTATGCTTCAT+AGG + chr1_3:49484219-49484238 None:intergenic 35.0%
GAAGCATAGACTTTGACATA+CGG - chr1_3:49484221-49484240 Msa0122700:intron 35.0%
ACGAGTAGTGTCCAAAATAT+AGG - chr1_3:49484263-49484282 Msa0122700:intron 35.0%
TGTCAAAGTCTATGCTTCAT+AGG + chr1_3:49484219-49484238 None:intergenic 35.0%
GAAGCATAGACTTTGACATA+CGG - chr1_3:49484221-49484240 Msa0122700:intron 35.0%
ACGAGTAGTGTCCAAAATAT+AGG - chr1_3:49484263-49484282 Msa0122700:intron 35.0%
GACGCAATTATATCAGCATA+AGG + chr1_3:49484559-49484578 None:intergenic 35.0%
CACTTGTGTTAGAGTTAGTT+AGG - chr1_3:49484647-49484666 Msa0122700:intron 35.0%
AGAGAAATGAGAGAAAGAGA+GGG + chr1_3:49484730-49484749 None:intergenic 35.0%
TGAATCCTCAACTTCTAACA+CGG - chr1_3:49484749-49484768 Msa0122700:intron 35.0%
! CTAGTTGCTTTCATTGAAGA+TGG + chr1_3:49484916-49484935 None:intergenic 35.0%
TGCTGTTATAATTGCATCAG+AGG + chr1_3:49485007-49485026 None:intergenic 35.0%
TCCTAATAAACAAGACCAAG+GGG - chr1_3:49485037-49485056 Msa0122700:intron 35.0%
ACCAAGGGGAATCATTTATA+AGG - chr1_3:49485051-49485070 Msa0122700:intron 35.0%
!! GCTGTTTTGGATGATGATAA+TGG + chr1_3:49485378-49485397 None:intergenic 35.0%
!! ATTCAGAAGCTATGCTGTTT+TGG + chr1_3:49485391-49485410 None:intergenic 35.0%
AGGTTACCAACTTCTTGAAT+TGG + chr1_3:49485422-49485441 None:intergenic 35.0%
!! TGTGATTCATTTGATGACGA+AGG + chr1_3:49485442-49485461 None:intergenic 35.0%
CCTCAAATTATGAGCATAAC+TGG + chr1_3:49485541-49485560 None:intergenic 35.0%
CCAGTTATGCTCATAATTTG+AGG - chr1_3:49485538-49485557 Msa0122700:intron 35.0%
TCATAATTTGAGGGAGAACA+AGG - chr1_3:49485548-49485567 Msa0122700:CDS 35.0%
TGTGGAGGAAATAATAAAGG+AGG + chr1_3:49485979-49485998 None:intergenic 35.0%
! CTTTTCAACTGTGTACTTTG+GGG - chr1_3:49486075-49486094 Msa0122700:intron 35.0%
! CGAATCCAATTTTTGATGTC+TGG + chr1_3:49486164-49486183 None:intergenic 35.0%
CAAAATATTAGTGGGGAACA+AGG - chr1_3:49486217-49486236 Msa0122700:intron 35.0%
! TTACTCTTTGTCCATCCTTT+TGG - chr1_3:49486277-49486296 Msa0122700:CDS 35.0%
TACATGGAAAACCAAAAGGA+TGG + chr1_3:49486291-49486310 None:intergenic 35.0%
AAGTGTAGCATAGTAATCAC+AGG + chr1_3:49486323-49486342 None:intergenic 35.0%
TACTATGCTACACTTGATAC+TGG - chr1_3:49486328-49486347 Msa0122700:CDS 35.0%
! AGGTTTTCTTTTCAGTAGCT+CGG - chr1_3:49486540-49486559 Msa0122700:CDS 35.0%
AATTTAGCGCAAAGATGATG+AGG + chr1_3:49486774-49486793 None:intergenic 35.0%
TGGTTAATCTTGAGTGTTTG+GGG + chr1_3:49486816-49486835 None:intergenic 35.0%
GTTGGTTAATCTTGAGTGTT+TGG + chr1_3:49486818-49486837 None:intergenic 35.0%
TTTGAGCGAGGAAGTTAATT+TGG - chr1_3:49486917-49486936 Msa0122700:CDS 35.0%
! TGCTACTTATTGGGTGTTAA+TGG - chr1_3:49486988-49487007 Msa0122700:intron 35.0%
AGGCTCCTGAAAAAAGAAAA+GGG + chr1_3:49487094-49487113 None:intergenic 35.0%
AGCAAACATTGTGTATAGTC+AGG + chr1_3:49487114-49487133 None:intergenic 35.0%
! AATATATTGGAGCACCAAGT+AGG + chr1_3:49487157-49487176 None:intergenic 35.0%
GAGTTTAGTCTGTCGTTAAA+TGG - chr1_3:49487344-49487363 Msa0122700:CDS 35.0%
TGCACTGCTTAAAATTGATG+GGG + chr1_3:49487694-49487713 None:intergenic 35.0%
!! AAAGATGTTTCTGGTGATTC+TGG + chr1_3:49487897-49487916 None:intergenic 35.0%
AGAATCACCAGAAACATCTT+TGG - chr1_3:49487896-49487915 Msa0122700:intron 35.0%
CATCTCATTTATCTTGTGTG+AGG - chr1_3:49488009-49488028 Msa0122700:intron 35.0%
! GTGTTGATAGATACTCTACA+AGG - chr1_3:49488040-49488059 Msa0122700:intron 35.0%
ATAGAAAGGGGAAACTTTCA+AGG - chr1_3:49488078-49488097 Msa0122700:intron 35.0%
! GATTTGTTCAATCCTTGAAG+AGG - chr1_3:49488106-49488125 Msa0122700:intron 35.0%
! AACTCAAGGTGGCAAATTTT+CGG - chr1_3:49488144-49488163 Msa0122700:CDS 35.0%
GGGTTCAAGAAGTAACAAAA+AGG - chr1_3:49488165-49488184 Msa0122700:CDS 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + chr1_3:49480675-49480694 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr1_3:49480779-49480798 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr1_3:49480783-49480802 None:intergenic 35.0%
! ACTTGAGTCTTTTGGCAAAA+TGG - chr1_3:49481254-49481273 Msa0122700:intron 35.0%
TACAACATGATTCTCCTTTG+TGG - chr1_3:49481290-49481309 Msa0122700:intron 35.0%
! ACAAGGACATTTTTCCACAA+AGG + chr1_3:49481307-49481326 None:intergenic 35.0%
! TCCGATCAAACTTTTTGACA+AGG + chr1_3:49481324-49481343 None:intergenic 35.0%
! GTGGAGAGATTTAACTTCAT+TGG - chr1_3:49481378-49481397 Msa0122700:intron 35.0%
! GAGAGATTTAACTTCATTGG+AGG - chr1_3:49481381-49481400 Msa0122700:intron 35.0%
TCATTGGAGGATTCAGTATT+CGG - chr1_3:49481394-49481413 Msa0122700:intron 35.0%
! AAGTTTGTGATCTTTTCCTG+CGG - chr1_3:49481453-49481472 Msa0122700:intron 35.0%
!! GCTTGCTATTACAGATAGAA+AGG - chr1_3:49481478-49481497 Msa0122700:intron 35.0%
AGTGAGGTTTGTGTTAGAAA+TGG - chr1_3:49481512-49481531 Msa0122700:intron 35.0%
GTGAGGTTTGTGTTAGAAAT+GGG - chr1_3:49481513-49481532 Msa0122700:intron 35.0%
TGAGGTTTGTGTTAGAAATG+GGG - chr1_3:49481514-49481533 Msa0122700:intron 35.0%
!! GAGAAGGTTGTTGTTTGTAT+GGG - chr1_3:49481562-49481581 Msa0122700:CDS 35.0%
AAATACCGAGAGAGATAGTT+GGG - chr1_3:49481634-49481653 Msa0122700:intron 35.0%
!! ATCAACTTATGACTTGTTGG+AGG - chr1_3:49481694-49481713 Msa0122700:intron 35.0%
!! TCAACTTATGACTTGTTGGA+GGG - chr1_3:49481695-49481714 Msa0122700:intron 35.0%
GGAAAATGATCTAGGTGAAT+TGG - chr1_3:49481730-49481749 Msa0122700:intron 35.0%
!! AAATGATTTTTGGAGGCCTT+TGG - chr1_3:49481756-49481775 Msa0122700:intron 35.0%
! CCTTTTCCACAAATTATTCC+GGG + chr1_3:49481845-49481864 None:intergenic 35.0%
! GCCTTTTCCACAAATTATTC+CGG + chr1_3:49481846-49481865 None:intergenic 35.0%
!!! AGATTTTGAGGTTGATGCAA+TGG - chr1_3:49482149-49482168 Msa0122700:CDS 35.0%
AGGAAATCAAAGTCCTCTTA+TGG - chr1_3:49482175-49482194 Msa0122700:CDS 35.0%
!!! GTTCTTTTTCAGTGCTGTTT+TGG - chr1_3:49482304-49482323 Msa0122700:CDS 35.0%
!!! TCTTTTTCAGTGCTGTTTTG+GGG - chr1_3:49482306-49482325 Msa0122700:CDS 35.0%
!!! GTGTTTTCCTCTTTTTTGGA+CGG - chr1_3:49482404-49482423 Msa0122700:intron 35.0%
!!! TGTTTTCCTCTTTTTTGGAC+GGG - chr1_3:49482405-49482424 Msa0122700:intron 35.0%
TGTTGTTCCAGTATCAGTTT+AGG - chr1_3:49482500-49482519 Msa0122700:CDS 35.0%
GTTGTTCCAGTATCAGTTTA+GGG - chr1_3:49482501-49482520 Msa0122700:CDS 35.0%
! GTTTTCATTTAAGCCGTACT+AGG - chr1_3:49482632-49482651 Msa0122700:intron 35.0%
! AGGTTTTCATATAGCTATCC+TGG - chr1_3:49482652-49482671 Msa0122700:intron 35.0%
! GGTTTTCATATAGCTATCCT+GGG - chr1_3:49482653-49482672 Msa0122700:intron 35.0%
! ATGATTTTTGTGAGAGCTTG+TGG + chr1_3:49482731-49482750 None:intergenic 35.0%
ATCATCATAAGTGCGAATGT+CGG - chr1_3:49482746-49482765 Msa0122700:intron 35.0%
AGGAGATAATAAGGCATGTT+TGG + chr1_3:49482785-49482804 None:intergenic 35.0%
GAGAAAGAGAGGAGATAATA+AGG + chr1_3:49482794-49482813 None:intergenic 35.0%
CATCTGAGAAACGTAATAGA+AGG + chr1_3:49482910-49482929 None:intergenic 35.0%
CTTCTATTACGTTTCTCAGA+TGG - chr1_3:49482908-49482927 Msa0122700:intron 35.0%
!!! CTAGTTTTATCACAACCATC+GGG - chr1_3:49482942-49482961 Msa0122700:intron 35.0%
! TTTTGTCTTTCTTGAGGAGA+TGG - chr1_3:49483015-49483034 Msa0122700:intron 35.0%
AACCCATTCTAGTAAGTACA+GGG + chr1_3:49483041-49483060 None:intergenic 35.0%
TAACCCATTCTAGTAAGTAC+AGG + chr1_3:49483042-49483061 None:intergenic 35.0%
! AGCGAATCAAGTTGCAAATA+TGG - chr1_3:49483111-49483130 Msa0122700:intron 35.0%
! GCGAATCAAGTTGCAAATAT+GGG - chr1_3:49483112-49483131 Msa0122700:intron 35.0%
CTGAAACTAACCAGTTGTAA+TGG + chr1_3:49483165-49483184 None:intergenic 35.0%
ATCCAATGTGCAAGAATAGA+AGG + chr1_3:49483342-49483361 None:intergenic 35.0%
TCTATTCTTGCACATTGGAT+AGG - chr1_3:49483342-49483361 Msa0122700:intron 35.0%
AGGTACCTTATACATTGATC+TGG + chr1_3:49483507-49483526 None:intergenic 35.0%
! TTTTACTAGATTGTATGGGC+TGG - chr1_3:49483590-49483609 Msa0122700:intron 35.0%
GCTGGATCTCTTTATTAGAT+TGG - chr1_3:49483608-49483627 Msa0122700:intron 35.0%
! ATAATTAGTGGGTACAACAC+CGG + chr1_3:49483690-49483709 None:intergenic 35.0%
CGTGTAAGGTGATAATTAGT+GGG + chr1_3:49483701-49483720 None:intergenic 35.0%
ACGTGTAAGGTGATAATTAG+TGG + chr1_3:49483702-49483721 None:intergenic 35.0%
!!! TGTTAGTTTTTTGTTGGGAG+TGG - chr1_3:49483987-49484006 Msa0122700:intron 35.0%
!!! GTTAGTTTTTTGTTGGGAGT+GGG - chr1_3:49483988-49484007 Msa0122700:intron 35.0%
!!! TTAGTTTTTTGTTGGGAGTG+GGG - chr1_3:49483989-49484008 Msa0122700:intron 35.0%
TACATTTATGACACGTCACA+AGG + chr1_3:49484129-49484148 None:intergenic 35.0%
!! TGACATTTTGACAGTGGTTA+GGG + chr1_3:49484160-49484179 None:intergenic 35.0%
!! ACTTTGTGACATTTTGACAG+TGG + chr1_3:49484166-49484185 None:intergenic 35.0%
CTTAGTTTAAATAGGAGCAG+TGG + chr1_3:49484190-49484209 None:intergenic 35.0%
TGTCAAAGTCTATGCTTCAT+AGG + chr1_3:49484219-49484238 None:intergenic 35.0%
GAAGCATAGACTTTGACATA+CGG - chr1_3:49484221-49484240 Msa0122700:intron 35.0%
ACGAGTAGTGTCCAAAATAT+AGG - chr1_3:49484263-49484282 Msa0122700:intron 35.0%
TGTCAAAGTCTATGCTTCAT+AGG + chr1_3:49484219-49484238 None:intergenic 35.0%
GAAGCATAGACTTTGACATA+CGG - chr1_3:49484221-49484240 Msa0122700:intron 35.0%
ACGAGTAGTGTCCAAAATAT+AGG - chr1_3:49484263-49484282 Msa0122700:intron 35.0%
GACGCAATTATATCAGCATA+AGG + chr1_3:49484559-49484578 None:intergenic 35.0%
CACTTGTGTTAGAGTTAGTT+AGG - chr1_3:49484647-49484666 Msa0122700:intron 35.0%
AGAGAAATGAGAGAAAGAGA+GGG + chr1_3:49484730-49484749 None:intergenic 35.0%
TGAATCCTCAACTTCTAACA+CGG - chr1_3:49484749-49484768 Msa0122700:intron 35.0%
! CTAGTTGCTTTCATTGAAGA+TGG + chr1_3:49484916-49484935 None:intergenic 35.0%
TGCTGTTATAATTGCATCAG+AGG + chr1_3:49485007-49485026 None:intergenic 35.0%
TCCTAATAAACAAGACCAAG+GGG - chr1_3:49485037-49485056 Msa0122700:intron 35.0%
ACCAAGGGGAATCATTTATA+AGG - chr1_3:49485051-49485070 Msa0122700:intron 35.0%
!! GCTGTTTTGGATGATGATAA+TGG + chr1_3:49485378-49485397 None:intergenic 35.0%
!! ATTCAGAAGCTATGCTGTTT+TGG + chr1_3:49485391-49485410 None:intergenic 35.0%
AGGTTACCAACTTCTTGAAT+TGG + chr1_3:49485422-49485441 None:intergenic 35.0%
!! TGTGATTCATTTGATGACGA+AGG + chr1_3:49485442-49485461 None:intergenic 35.0%
CCTCAAATTATGAGCATAAC+TGG + chr1_3:49485541-49485560 None:intergenic 35.0%
CCAGTTATGCTCATAATTTG+AGG - chr1_3:49485538-49485557 Msa0122700:intron 35.0%
TCATAATTTGAGGGAGAACA+AGG - chr1_3:49485548-49485567 Msa0122700:CDS 35.0%
TGTGGAGGAAATAATAAAGG+AGG + chr1_3:49485979-49485998 None:intergenic 35.0%
! CTTTTCAACTGTGTACTTTG+GGG - chr1_3:49486075-49486094 Msa0122700:intron 35.0%
! CGAATCCAATTTTTGATGTC+TGG + chr1_3:49486164-49486183 None:intergenic 35.0%
CAAAATATTAGTGGGGAACA+AGG - chr1_3:49486217-49486236 Msa0122700:intron 35.0%
! TTACTCTTTGTCCATCCTTT+TGG - chr1_3:49486277-49486296 Msa0122700:CDS 35.0%
TACATGGAAAACCAAAAGGA+TGG + chr1_3:49486291-49486310 None:intergenic 35.0%
AAGTGTAGCATAGTAATCAC+AGG + chr1_3:49486323-49486342 None:intergenic 35.0%
TACTATGCTACACTTGATAC+TGG - chr1_3:49486328-49486347 Msa0122700:CDS 35.0%
! AGGTTTTCTTTTCAGTAGCT+CGG - chr1_3:49486540-49486559 Msa0122700:CDS 35.0%
AATTTAGCGCAAAGATGATG+AGG + chr1_3:49486774-49486793 None:intergenic 35.0%
TGGTTAATCTTGAGTGTTTG+GGG + chr1_3:49486816-49486835 None:intergenic 35.0%
GTTGGTTAATCTTGAGTGTT+TGG + chr1_3:49486818-49486837 None:intergenic 35.0%
TTTGAGCGAGGAAGTTAATT+TGG - chr1_3:49486917-49486936 Msa0122700:CDS 35.0%
! TGCTACTTATTGGGTGTTAA+TGG - chr1_3:49486988-49487007 Msa0122700:intron 35.0%
AGGCTCCTGAAAAAAGAAAA+GGG + chr1_3:49487094-49487113 None:intergenic 35.0%
AGCAAACATTGTGTATAGTC+AGG + chr1_3:49487114-49487133 None:intergenic 35.0%
! AATATATTGGAGCACCAAGT+AGG + chr1_3:49487157-49487176 None:intergenic 35.0%
GAGTTTAGTCTGTCGTTAAA+TGG - chr1_3:49487344-49487363 Msa0122700:CDS 35.0%
TGCACTGCTTAAAATTGATG+GGG + chr1_3:49487694-49487713 None:intergenic 35.0%
!! AAAGATGTTTCTGGTGATTC+TGG + chr1_3:49487897-49487916 None:intergenic 35.0%
AGAATCACCAGAAACATCTT+TGG - chr1_3:49487896-49487915 Msa0122700:intron 35.0%
CATCTCATTTATCTTGTGTG+AGG - chr1_3:49488009-49488028 Msa0122700:intron 35.0%
! GTGTTGATAGATACTCTACA+AGG - chr1_3:49488040-49488059 Msa0122700:intron 35.0%
ATAGAAAGGGGAAACTTTCA+AGG - chr1_3:49488078-49488097 Msa0122700:intron 35.0%
! GATTTGTTCAATCCTTGAAG+AGG - chr1_3:49488106-49488125 Msa0122700:intron 35.0%
! AACTCAAGGTGGCAAATTTT+CGG - chr1_3:49488144-49488163 Msa0122700:CDS 35.0%
GGGTTCAAGAAGTAACAAAA+AGG - chr1_3:49488165-49488184 Msa0122700:CDS 35.0%
CTAATCAAGCTTCTCCTCAT+CGG - chr1_3:49480566-49480585 Msa0122700:CDS 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + chr1_3:49480676-49480695 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr1_3:49480780-49480799 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:49480918-49480937 Msa0122700:intron 40.0%
!!! GGAGGGAGTATTATTTTCAG+CGG - chr1_3:49480935-49480954 Msa0122700:intron 40.0%
! AGTGGTCAACTTGAGTCTTT+TGG - chr1_3:49481246-49481265 Msa0122700:intron 40.0%
GTCAAAAAGTTTGATCGGAG+TGG - chr1_3:49481325-49481344 Msa0122700:intron 40.0%
CATTGGAGGATTCAGTATTC+GGG - chr1_3:49481395-49481414 Msa0122700:intron 40.0%
! TGGAGGAGATTGGTTCAAAA+GGG - chr1_3:49481418-49481437 Msa0122700:intron 40.0%
!! GGAGAAGGTTGTTGTTTGTA+TGG - chr1_3:49481561-49481580 Msa0122700:CDS 40.0%
CAACTATCTCTCTCGGTATT+TGG + chr1_3:49481635-49481654 None:intergenic 40.0%
CAAATACCGAGAGAGATAGT+TGG - chr1_3:49481633-49481652 Msa0122700:intron 40.0%
AATACCGAGAGAGATAGTTG+GGG - chr1_3:49481635-49481654 Msa0122700:intron 40.0%
!! CAACTTATGACTTGTTGGAG+GGG - chr1_3:49481696-49481715 Msa0122700:intron 40.0%
! AGAGAAAGCCACTCTTTTGA+AGG + chr1_3:49481794-49481813 None:intergenic 40.0%
TCAAAAGAGTGGCTTTCTCT+TGG - chr1_3:49481794-49481813 Msa0122700:intron 40.0%
! CCCGGAATAATTTGTGGAAA+AGG - chr1_3:49481842-49481861 Msa0122700:CDS 40.0%
ACAAAAGACACACTCTCTAG+AGG + chr1_3:49481887-49481906 None:intergenic 40.0%
!! TCTAGAGAGTGTGTCTTTTG+TGG - chr1_3:49481886-49481905 Msa0122700:intron 40.0%
!! CTAGAGAGTGTGTCTTTTGT+GGG - chr1_3:49481887-49481906 Msa0122700:intron 40.0%
! TGTCTTTTGTGGGAATGATG+AGG - chr1_3:49481897-49481916 Msa0122700:intron 40.0%
!! GTTATTTTGCTGCTCAAGTG+CGG - chr1_3:49481947-49481966 Msa0122700:intron 40.0%
!! TTATTTTGCTGCTCAAGTGC+GGG - chr1_3:49481948-49481967 Msa0122700:intron 40.0%
!! TGCGGGATAAGATTTTGAGA+TGG - chr1_3:49481965-49481984 Msa0122700:intron 40.0%
!!! GATTTTGAGATGGATAGGTG+TGG - chr1_3:49481975-49481994 Msa0122700:intron 40.0%
TTATTTGGCACACTACCGTT+TGG - chr1_3:49482085-49482104 Msa0122700:intron 40.0%
TATTTGGCACACTACCGTTT+GGG - chr1_3:49482086-49482105 Msa0122700:intron 40.0%
CATACTCCAAATCACCCAAA+CGG + chr1_3:49482103-49482122 None:intergenic 40.0%
!!! TTTTGAGGTTGATGCAATGG+TGG - chr1_3:49482152-49482171 Msa0122700:CDS 40.0%
TCAAAGTCCTCTTATGGAAG+CGG - chr1_3:49482181-49482200 Msa0122700:CDS 40.0%
TATTGGGGGTAACCAAATAC+TGG - chr1_3:49482367-49482386 Msa0122700:intron 40.0%
ATTGGGGGTAACCAAATACT+GGG - chr1_3:49482368-49482387 Msa0122700:intron 40.0%
CAAAACAACCACCCAGTATT+TGG + chr1_3:49482382-49482401 None:intergenic 40.0%
!!! GTTTTCCTCTTTTTTGGACG+GGG - chr1_3:49482406-49482425 Msa0122700:intron 40.0%
CATGAACAACGCAACAAACA+GGG + chr1_3:49482451-49482470 None:intergenic 40.0%
TCATGAACAACGCAACAAAC+AGG + chr1_3:49482452-49482471 None:intergenic 40.0%
! TGTTTGTTGCGTTGTTCATG+AGG - chr1_3:49482451-49482470 Msa0122700:CDS 40.0%
! TTGTATCTGCTCTTTTTGCC+CGG - chr1_3:49482548-49482567 Msa0122700:intron 40.0%
CTTATTTCCATAAGCTACCC+AGG + chr1_3:49482673-49482692 None:intergenic 40.0%
!!! TTTTTTCACATTGGCAGGTG+TGG - chr1_3:49482874-49482893 Msa0122700:intron 40.0%
! TTTTTCACATTGGCAGGTGT+GGG - chr1_3:49482875-49482894 Msa0122700:intron 40.0%
! TTTTATCACAACCATCGGGT+AGG - chr1_3:49482946-49482965 Msa0122700:intron 40.0%
ATAAGGACCATAGAGCTTGA+TGG - chr1_3:49483086-49483105 Msa0122700:intron 40.0%
CAAGTTGCAAATATGGGACA+CGG - chr1_3:49483118-49483137 Msa0122700:intron 40.0%
CTCCTTCTATTCTTGCACAT+TGG - chr1_3:49483337-49483356 Msa0122700:intron 40.0%
! AAGGTACCTGATATGATTGG+TGG - chr1_3:49483518-49483537 Msa0122700:intron 40.0%
AATAGGCCACCAATCATATC+AGG + chr1_3:49483527-49483546 None:intergenic 40.0%
TATCAGACCTGTGAAGTAGT+TGG - chr1_3:49483660-49483679 Msa0122700:intron 40.0%
CTGTGAAGTAGTTGGATATC+CGG - chr1_3:49483668-49483687 Msa0122700:intron 40.0%
TATCACCTTACACGTGATTG+AGG - chr1_3:49483707-49483726 Msa0122700:intron 40.0%
CTAAACCTCAATCACGTGTA+AGG + chr1_3:49483715-49483734 None:intergenic 40.0%
TTGTAAGGAGTCGAGTGATA+AGG + chr1_3:49484031-49484050 None:intergenic 40.0%
!! GTGACATTTTGACAGTGGTT+AGG + chr1_3:49484161-49484180 None:intergenic 40.0%
GTGTCCAAAATATAGGACAC+CGG - chr1_3:49484270-49484289 Msa0122700:intron 40.0%
TGTCCAAAATATAGGACACC+GGG - chr1_3:49484271-49484290 Msa0122700:intron 40.0%
AGTCTATGCTTCATAGGTCT+AGG + chr1_3:49484213-49484232 None:intergenic 40.0%
GTGTCCAAAATATAGGACAC+CGG - chr1_3:49484270-49484289 Msa0122700:intron 40.0%
TGTCCAAAATATAGGACACC+GGG - chr1_3:49484271-49484290 Msa0122700:intron 40.0%
TGCTGATATAATTGCGTCAG+AGG - chr1_3:49484561-49484580 Msa0122700:intron 40.0%
TCTTCCTCCAGAATTCTGTT+AGG - chr1_3:49484597-49484616 Msa0122700:intron 40.0%
CAGAGAAATGAGAGAAAGAG+AGG + chr1_3:49484731-49484750 None:intergenic 40.0%
AGATACCGTGTTAGAAGTTG+AGG + chr1_3:49484757-49484776 None:intergenic 40.0%
CAATCTTTAGCCATGGCTAT+TGG - chr1_3:49484790-49484809 Msa0122700:intron 40.0%
!! CTAGTTAAAGGCGTTCATTG+AGG - chr1_3:49484932-49484951 Msa0122700:intron 40.0%
CGTTCATTGAGGAACAAACT+TGG - chr1_3:49484943-49484962 Msa0122700:intron 40.0%
!! TCCCCTTGGTCTTGTTTATT+AGG + chr1_3:49485041-49485060 None:intergenic 40.0%
GCCTTATAAATGATTCCCCT+TGG + chr1_3:49485055-49485074 None:intergenic 40.0%
AAGAGGAGAGGGATATTTGT+GGG + chr1_3:49485482-49485501 None:intergenic 40.0%
AAAGAGGAGAGGGATATTTG+TGG + chr1_3:49485483-49485502 None:intergenic 40.0%
GATGATATGGAAAGAGGAGA+GGG + chr1_3:49485493-49485512 None:intergenic 40.0%
TGATGATATGGAAAGAGGAG+AGG + chr1_3:49485494-49485513 None:intergenic 40.0%
!! TGTATGCCAAAGTGTTGAAG+AGG - chr1_3:49485587-49485606 Msa0122700:CDS 40.0%
!!! AAAAGGTGGAGGGTACTTTT+TGG - chr1_3:49485652-49485671 Msa0122700:intron 40.0%
TAAGTTCTTCTTCCACCTTC+TGG - chr1_3:49485935-49485954 Msa0122700:intron 40.0%
GCAAAACTAAAACCAGAAGG+TGG + chr1_3:49485950-49485969 None:intergenic 40.0%
ACTTGTTCCAATGATTCGTG+TGG + chr1_3:49486035-49486054 None:intergenic 40.0%
CGTGTACATGGAAAACCAAA+AGG + chr1_3:49486295-49486314 None:intergenic 40.0%
TCACAGGATATACGTGTACA+TGG + chr1_3:49486307-49486326 None:intergenic 40.0%
! TTTGAAGTTGGAACAGCCTA+AGG + chr1_3:49486364-49486383 None:intergenic 40.0%
TTAGGCTGTTCCAACTTCAA+AGG - chr1_3:49486363-49486382 Msa0122700:CDS 40.0%
TAGGCTGTTCCAACTTCAAA+GGG - chr1_3:49486364-49486383 Msa0122700:CDS 40.0%
GCAGCACTTATTACTCTTGT+TGG - chr1_3:49486434-49486453 Msa0122700:intron 40.0%
! GGTTTTCTTTTCAGTAGCTC+GGG - chr1_3:49486541-49486560 Msa0122700:CDS 40.0%
AGACTCTTCCTTGATATTGC+TGG - chr1_3:49486708-49486727 Msa0122700:intron 40.0%
AAGATTAACCAACCAGACCA+GGG - chr1_3:49486825-49486844 Msa0122700:CDS 40.0%
AGACTAGATCCTTCCTATGT+TGG - chr1_3:49487012-49487031 Msa0122700:intron 40.0%
GACTAGATCCTTCCTATGTT+GGG - chr1_3:49487013-49487032 Msa0122700:intron 40.0%
CAGGCTCCTGAAAAAAGAAA+AGG + chr1_3:49487095-49487114 None:intergenic 40.0%
! TTAGTTTGACGTGCCAAACA+TGG - chr1_3:49487411-49487430 Msa0122700:CDS 40.0%
TTAAAATTGATGGGGGGTGA+GGG + chr1_3:49487686-49487705 None:intergenic 40.0%
CACTGCTTAAAATTGATGGG+GGG + chr1_3:49487692-49487711 None:intergenic 40.0%
GCACTGCTTAAAATTGATGG+GGG + chr1_3:49487693-49487712 None:intergenic 40.0%
!! GCTTTGAAGTCAAGGTGTTT+GGG - chr1_3:49487844-49487863 Msa0122700:intron 40.0%
! GGTGATTCTGGAAAAAGTCT+GGG + chr1_3:49487885-49487904 None:intergenic 40.0%
! TGGTGATTCTGGAAAAAGTC+TGG + chr1_3:49487886-49487905 None:intergenic 40.0%
TTGGATGCCAAAGATGTTTC+TGG + chr1_3:49487906-49487925 None:intergenic 40.0%
CTCTACAAGGGTGAAATTCT+AGG - chr1_3:49488053-49488072 Msa0122700:intron 40.0%
TTGTTCAATCCTTGAAGAGG+AGG - chr1_3:49488109-49488128 Msa0122700:intron 40.0%
TTCAATCGAAGAACTCAAGG+TGG - chr1_3:49488133-49488152 Msa0122700:CDS 40.0%
! ACTCAAGGTGGCAAATTTTC+GGG - chr1_3:49488145-49488164 Msa0122700:CDS 40.0%
CTAATCAAGCTTCTCCTCAT+CGG - chr1_3:49480566-49480585 Msa0122700:CDS 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + chr1_3:49480676-49480695 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr1_3:49480780-49480799 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:49480918-49480937 Msa0122700:intron 40.0%
!!! GGAGGGAGTATTATTTTCAG+CGG - chr1_3:49480935-49480954 Msa0122700:intron 40.0%
! AGTGGTCAACTTGAGTCTTT+TGG - chr1_3:49481246-49481265 Msa0122700:intron 40.0%
GTCAAAAAGTTTGATCGGAG+TGG - chr1_3:49481325-49481344 Msa0122700:intron 40.0%
CATTGGAGGATTCAGTATTC+GGG - chr1_3:49481395-49481414 Msa0122700:intron 40.0%
! TGGAGGAGATTGGTTCAAAA+GGG - chr1_3:49481418-49481437 Msa0122700:intron 40.0%
!! GGAGAAGGTTGTTGTTTGTA+TGG - chr1_3:49481561-49481580 Msa0122700:CDS 40.0%
CAACTATCTCTCTCGGTATT+TGG + chr1_3:49481635-49481654 None:intergenic 40.0%
CAAATACCGAGAGAGATAGT+TGG - chr1_3:49481633-49481652 Msa0122700:intron 40.0%
AATACCGAGAGAGATAGTTG+GGG - chr1_3:49481635-49481654 Msa0122700:intron 40.0%
!! CAACTTATGACTTGTTGGAG+GGG - chr1_3:49481696-49481715 Msa0122700:intron 40.0%
! AGAGAAAGCCACTCTTTTGA+AGG + chr1_3:49481794-49481813 None:intergenic 40.0%
TCAAAAGAGTGGCTTTCTCT+TGG - chr1_3:49481794-49481813 Msa0122700:intron 40.0%
! CCCGGAATAATTTGTGGAAA+AGG - chr1_3:49481842-49481861 Msa0122700:CDS 40.0%
ACAAAAGACACACTCTCTAG+AGG + chr1_3:49481887-49481906 None:intergenic 40.0%
!! TCTAGAGAGTGTGTCTTTTG+TGG - chr1_3:49481886-49481905 Msa0122700:intron 40.0%
!! CTAGAGAGTGTGTCTTTTGT+GGG - chr1_3:49481887-49481906 Msa0122700:intron 40.0%
! TGTCTTTTGTGGGAATGATG+AGG - chr1_3:49481897-49481916 Msa0122700:intron 40.0%
!! GTTATTTTGCTGCTCAAGTG+CGG - chr1_3:49481947-49481966 Msa0122700:intron 40.0%
!! TTATTTTGCTGCTCAAGTGC+GGG - chr1_3:49481948-49481967 Msa0122700:intron 40.0%
!! TGCGGGATAAGATTTTGAGA+TGG - chr1_3:49481965-49481984 Msa0122700:intron 40.0%
!!! GATTTTGAGATGGATAGGTG+TGG - chr1_3:49481975-49481994 Msa0122700:intron 40.0%
TTATTTGGCACACTACCGTT+TGG - chr1_3:49482085-49482104 Msa0122700:intron 40.0%
TATTTGGCACACTACCGTTT+GGG - chr1_3:49482086-49482105 Msa0122700:intron 40.0%
CATACTCCAAATCACCCAAA+CGG + chr1_3:49482103-49482122 None:intergenic 40.0%
!!! TTTTGAGGTTGATGCAATGG+TGG - chr1_3:49482152-49482171 Msa0122700:CDS 40.0%
TCAAAGTCCTCTTATGGAAG+CGG - chr1_3:49482181-49482200 Msa0122700:CDS 40.0%
TATTGGGGGTAACCAAATAC+TGG - chr1_3:49482367-49482386 Msa0122700:intron 40.0%
ATTGGGGGTAACCAAATACT+GGG - chr1_3:49482368-49482387 Msa0122700:intron 40.0%
CAAAACAACCACCCAGTATT+TGG + chr1_3:49482382-49482401 None:intergenic 40.0%
!!! GTTTTCCTCTTTTTTGGACG+GGG - chr1_3:49482406-49482425 Msa0122700:intron 40.0%
CATGAACAACGCAACAAACA+GGG + chr1_3:49482451-49482470 None:intergenic 40.0%
TCATGAACAACGCAACAAAC+AGG + chr1_3:49482452-49482471 None:intergenic 40.0%
! TGTTTGTTGCGTTGTTCATG+AGG - chr1_3:49482451-49482470 Msa0122700:CDS 40.0%
! TTGTATCTGCTCTTTTTGCC+CGG - chr1_3:49482548-49482567 Msa0122700:intron 40.0%
CTTATTTCCATAAGCTACCC+AGG + chr1_3:49482673-49482692 None:intergenic 40.0%
!!! TTTTTTCACATTGGCAGGTG+TGG - chr1_3:49482874-49482893 Msa0122700:intron 40.0%
! TTTTTCACATTGGCAGGTGT+GGG - chr1_3:49482875-49482894 Msa0122700:intron 40.0%
! TTTTATCACAACCATCGGGT+AGG - chr1_3:49482946-49482965 Msa0122700:intron 40.0%
ATAAGGACCATAGAGCTTGA+TGG - chr1_3:49483086-49483105 Msa0122700:intron 40.0%
CAAGTTGCAAATATGGGACA+CGG - chr1_3:49483118-49483137 Msa0122700:intron 40.0%
CTCCTTCTATTCTTGCACAT+TGG - chr1_3:49483337-49483356 Msa0122700:intron 40.0%
! AAGGTACCTGATATGATTGG+TGG - chr1_3:49483518-49483537 Msa0122700:intron 40.0%
AATAGGCCACCAATCATATC+AGG + chr1_3:49483527-49483546 None:intergenic 40.0%
TATCAGACCTGTGAAGTAGT+TGG - chr1_3:49483660-49483679 Msa0122700:intron 40.0%
CTGTGAAGTAGTTGGATATC+CGG - chr1_3:49483668-49483687 Msa0122700:intron 40.0%
TATCACCTTACACGTGATTG+AGG - chr1_3:49483707-49483726 Msa0122700:intron 40.0%
CTAAACCTCAATCACGTGTA+AGG + chr1_3:49483715-49483734 None:intergenic 40.0%
TTGTAAGGAGTCGAGTGATA+AGG + chr1_3:49484031-49484050 None:intergenic 40.0%
!! GTGACATTTTGACAGTGGTT+AGG + chr1_3:49484161-49484180 None:intergenic 40.0%
GTGTCCAAAATATAGGACAC+CGG - chr1_3:49484270-49484289 Msa0122700:intron 40.0%
TGTCCAAAATATAGGACACC+GGG - chr1_3:49484271-49484290 Msa0122700:intron 40.0%
AGTCTATGCTTCATAGGTCT+AGG + chr1_3:49484213-49484232 None:intergenic 40.0%
GTGTCCAAAATATAGGACAC+CGG - chr1_3:49484270-49484289 Msa0122700:intron 40.0%
TGTCCAAAATATAGGACACC+GGG - chr1_3:49484271-49484290 Msa0122700:intron 40.0%
TGCTGATATAATTGCGTCAG+AGG - chr1_3:49484561-49484580 Msa0122700:intron 40.0%
TCTTCCTCCAGAATTCTGTT+AGG - chr1_3:49484597-49484616 Msa0122700:intron 40.0%
CAGAGAAATGAGAGAAAGAG+AGG + chr1_3:49484731-49484750 None:intergenic 40.0%
AGATACCGTGTTAGAAGTTG+AGG + chr1_3:49484757-49484776 None:intergenic 40.0%
CAATCTTTAGCCATGGCTAT+TGG - chr1_3:49484790-49484809 Msa0122700:intron 40.0%
!! CTAGTTAAAGGCGTTCATTG+AGG - chr1_3:49484932-49484951 Msa0122700:intron 40.0%
CGTTCATTGAGGAACAAACT+TGG - chr1_3:49484943-49484962 Msa0122700:intron 40.0%
!! TCCCCTTGGTCTTGTTTATT+AGG + chr1_3:49485041-49485060 None:intergenic 40.0%
GCCTTATAAATGATTCCCCT+TGG + chr1_3:49485055-49485074 None:intergenic 40.0%
AAGAGGAGAGGGATATTTGT+GGG + chr1_3:49485482-49485501 None:intergenic 40.0%
AAAGAGGAGAGGGATATTTG+TGG + chr1_3:49485483-49485502 None:intergenic 40.0%
GATGATATGGAAAGAGGAGA+GGG + chr1_3:49485493-49485512 None:intergenic 40.0%
TGATGATATGGAAAGAGGAG+AGG + chr1_3:49485494-49485513 None:intergenic 40.0%
!! TGTATGCCAAAGTGTTGAAG+AGG - chr1_3:49485587-49485606 Msa0122700:CDS 40.0%
!!! AAAAGGTGGAGGGTACTTTT+TGG - chr1_3:49485652-49485671 Msa0122700:intron 40.0%
TAAGTTCTTCTTCCACCTTC+TGG - chr1_3:49485935-49485954 Msa0122700:intron 40.0%
GCAAAACTAAAACCAGAAGG+TGG + chr1_3:49485950-49485969 None:intergenic 40.0%
ACTTGTTCCAATGATTCGTG+TGG + chr1_3:49486035-49486054 None:intergenic 40.0%
CGTGTACATGGAAAACCAAA+AGG + chr1_3:49486295-49486314 None:intergenic 40.0%
TCACAGGATATACGTGTACA+TGG + chr1_3:49486307-49486326 None:intergenic 40.0%
! TTTGAAGTTGGAACAGCCTA+AGG + chr1_3:49486364-49486383 None:intergenic 40.0%
TTAGGCTGTTCCAACTTCAA+AGG - chr1_3:49486363-49486382 Msa0122700:CDS 40.0%
TAGGCTGTTCCAACTTCAAA+GGG - chr1_3:49486364-49486383 Msa0122700:CDS 40.0%
GCAGCACTTATTACTCTTGT+TGG - chr1_3:49486434-49486453 Msa0122700:intron 40.0%
! GGTTTTCTTTTCAGTAGCTC+GGG - chr1_3:49486541-49486560 Msa0122700:CDS 40.0%
AGACTCTTCCTTGATATTGC+TGG - chr1_3:49486708-49486727 Msa0122700:intron 40.0%
AAGATTAACCAACCAGACCA+GGG - chr1_3:49486825-49486844 Msa0122700:CDS 40.0%
AGACTAGATCCTTCCTATGT+TGG - chr1_3:49487012-49487031 Msa0122700:intron 40.0%
GACTAGATCCTTCCTATGTT+GGG - chr1_3:49487013-49487032 Msa0122700:intron 40.0%
CAGGCTCCTGAAAAAAGAAA+AGG + chr1_3:49487095-49487114 None:intergenic 40.0%
! TTAGTTTGACGTGCCAAACA+TGG - chr1_3:49487411-49487430 Msa0122700:CDS 40.0%
TTAAAATTGATGGGGGGTGA+GGG + chr1_3:49487686-49487705 None:intergenic 40.0%
CACTGCTTAAAATTGATGGG+GGG + chr1_3:49487692-49487711 None:intergenic 40.0%
GCACTGCTTAAAATTGATGG+GGG + chr1_3:49487693-49487712 None:intergenic 40.0%
!! GCTTTGAAGTCAAGGTGTTT+GGG - chr1_3:49487844-49487863 Msa0122700:intron 40.0%
! GGTGATTCTGGAAAAAGTCT+GGG + chr1_3:49487885-49487904 None:intergenic 40.0%
! TGGTGATTCTGGAAAAAGTC+TGG + chr1_3:49487886-49487905 None:intergenic 40.0%
TTGGATGCCAAAGATGTTTC+TGG + chr1_3:49487906-49487925 None:intergenic 40.0%
CTCTACAAGGGTGAAATTCT+AGG - chr1_3:49488053-49488072 Msa0122700:intron 40.0%
TTGTTCAATCCTTGAAGAGG+AGG - chr1_3:49488109-49488128 Msa0122700:intron 40.0%
TTCAATCGAAGAACTCAAGG+TGG - chr1_3:49488133-49488152 Msa0122700:CDS 40.0%
! ACTCAAGGTGGCAAATTTTC+GGG - chr1_3:49488145-49488164 Msa0122700:CDS 40.0%
CGATGAGGAGAAGCTTGATT+AGG + chr1_3:49480568-49480587 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_3:49480917-49480936 Msa0122700:intron 45.0%
!! ATAAGGTGGTTTGGTGGGTA+AGG - chr1_3:49481215-49481234 Msa0122700:intron 45.0%
!! TAAGGTGGTTTGGTGGGTAA+GGG - chr1_3:49481216-49481235 Msa0122700:intron 45.0%
! GTCTTTTGGCAAAATGGCGT+TGG - chr1_3:49481260-49481279 Msa0122700:intron 45.0%
!! CACCATACAGAAGCACTTCT+CGG + chr1_3:49481361-49481380 None:intergenic 45.0%
! GTGGAGGAGATTGGTTCAAA+AGG - chr1_3:49481417-49481436 Msa0122700:intron 45.0%
AAAGGTTGCGAAGTTGAGTG+AGG - chr1_3:49481496-49481515 Msa0122700:intron 45.0%
GTGTTAGAAATGGGGAAGAG+TGG - chr1_3:49481522-49481541 Msa0122700:intron 45.0%
GAAATGGGGAAGAGTGGAAT+TGG - chr1_3:49481528-49481547 Msa0122700:intron 45.0%
ATACCGAGAGAGATAGTTGG+GGG - chr1_3:49481636-49481655 Msa0122700:intron 45.0%
! GTTGGAGGGGATTTTTGTGT+TGG - chr1_3:49481709-49481728 Msa0122700:CDS 45.0%
!! AAGGTGCCAGACTTTTCCAA+AGG + chr1_3:49481775-49481794 None:intergenic 45.0%
TCCTACATAGATTTCCAGCC+CGG - chr1_3:49481824-49481843 Msa0122700:intron 45.0%
TTCCAGCCCGGAATAATTTG+TGG - chr1_3:49481836-49481855 Msa0122700:CDS 45.0%
TTCCACAAATTATTCCGGGC+TGG + chr1_3:49481841-49481860 None:intergenic 45.0%
ACACTACCGTTTGGGTGATT+TGG - chr1_3:49482094-49482113 Msa0122700:intron 45.0%
TGCTTTGCTAGGTAGGAAGT+TGG - chr1_3:49482267-49482286 Msa0122700:intron 45.0%
GCTTTGCTAGGTAGGAAGTT+GGG - chr1_3:49482268-49482287 Msa0122700:intron 45.0%
!!! AGTGCTGTTTTGGGGTTGAT+GGG - chr1_3:49482314-49482333 Msa0122700:CDS 45.0%
GCTGTCGATCGATGTGTATT+GGG - chr1_3:49482351-49482370 Msa0122700:intron 45.0%
CTGTCGATCGATGTGTATTG+GGG - chr1_3:49482352-49482371 Msa0122700:intron 45.0%
TGTCGATCGATGTGTATTGG+GGG - chr1_3:49482353-49482372 Msa0122700:intron 45.0%
AAACAAAACAGAGAACCCGC+AGG + chr1_3:49482481-49482500 None:intergenic 45.0%
CCAGTACCCTAAACTGATAC+TGG + chr1_3:49482510-49482529 None:intergenic 45.0%
! CCAGTATCAGTTTAGGGTAC+TGG - chr1_3:49482507-49482526 Msa0122700:CDS 45.0%
!! CAGTTTAGGGTACTGGATTG+TGG - chr1_3:49482514-49482533 Msa0122700:CDS 45.0%
TAGCTATCCTGGGTAGCTTA+TGG - chr1_3:49482663-49482682 Msa0122700:intron 45.0%
TGGCCCTGTACTTACTAGAA+TGG - chr1_3:49483035-49483054 Msa0122700:intron 45.0%
GGCCCTGTACTTACTAGAAT+GGG - chr1_3:49483036-49483055 Msa0122700:intron 45.0%
TCGCTTACCATCAAGCTCTA+TGG + chr1_3:49483096-49483115 None:intergenic 45.0%
CGGTTTCGAACCATTACAAC+TGG - chr1_3:49483152-49483171 Msa0122700:intron 45.0%
CGGATATCCAACTACTTCAC+AGG + chr1_3:49483670-49483689 None:intergenic 45.0%
! TGTCCCGGTGTCCTATATTT+TGG + chr1_3:49484277-49484296 None:intergenic 45.0%
GCTTCATAGGTCTAGGTATG+AGG + chr1_3:49484300-49484319 None:intergenic 45.0%
! TGTCCCGGTGTCCTATATTT+TGG + chr1_3:49484277-49484296 None:intergenic 45.0%
! TACACAAGTATGAGGTGTCC+CGG + chr1_3:49484386-49484405 None:intergenic 45.0%
! GAATTCTGGAGGAAGAGAAG+AGG + chr1_3:49484593-49484612 None:intergenic 45.0%
CTGTCCTAACAGAATTCTGG+AGG + chr1_3:49484604-49484623 None:intergenic 45.0%
CAGCTGTCCTAACAGAATTC+TGG + chr1_3:49484607-49484626 None:intergenic 45.0%
AGTGTCAGTTGTCCTAGGTT+AGG + chr1_3:49484631-49484650 None:intergenic 45.0%
ACACAAGTGTCAGTTGTCCT+AGG + chr1_3:49484636-49484655 None:intergenic 45.0%
TCAGTGACATGAGAAGAGGT+AGG + chr1_3:49484824-49484843 None:intergenic 45.0%
TCGATCAGTGACATGAGAAG+AGG + chr1_3:49484828-49484847 None:intergenic 45.0%
TGTCACTGATCGAGTTACTG+CGG - chr1_3:49484835-49484854 Msa0122700:intron 45.0%
AGTTGTCCGAGACAAGTGTT+TGG - chr1_3:49485220-49485239 Msa0122700:intron 45.0%
TCTTGGCCAAACACTTGTCT+CGG + chr1_3:49485229-49485248 None:intergenic 45.0%
!! CGTGTTCAAGGCTTGCTAAT+AGG - chr1_3:49485275-49485294 Msa0122700:intron 45.0%
ATGGGAAGATGAAGATCCCT+TGG + chr1_3:49485359-49485378 None:intergenic 45.0%
GAGAACAAGGCTCAAGTTAC+TGG - chr1_3:49485561-49485580 Msa0122700:CDS 45.0%
TATTGGGCAGCTTATTACCG+TGG - chr1_3:49485858-49485877 Msa0122700:intron 45.0%
AGCTTATTACCGTGGAGCAA+TGG - chr1_3:49485866-49485885 Msa0122700:intron 45.0%
GCTTATTACCGTGGAGCAAT+GGG - chr1_3:49485867-49485886 Msa0122700:intron 45.0%
GCAAAATACCCATTGCTCCA+CGG + chr1_3:49485878-49485897 None:intergenic 45.0%
GGCGCAAAACTAAAACCAGA+AGG + chr1_3:49485953-49485972 None:intergenic 45.0%
CCCTTTGCTTTCATCCATGT+CGG + chr1_3:49486243-49486262 None:intergenic 45.0%
CCGACATGGATGAAAGCAAA+GGG - chr1_3:49486240-49486259 Msa0122700:intron 45.0%
GGACAAAGAGTAAGTGTGTG+AGG + chr1_3:49486270-49486289 None:intergenic 45.0%
!! AGAGCTTGACCCTTTGAAGT+TGG + chr1_3:49486376-49486395 None:intergenic 45.0%
AACTTCAAAGGGTCAAGCTC+TGG - chr1_3:49486375-49486394 Msa0122700:CDS 45.0%
! CAAGCTCTGGCAGATGAATA+CGG - chr1_3:49486388-49486407 Msa0122700:intron 45.0%
TAGAAACAGCACAGCGGTTT+CGG + chr1_3:49486469-49486488 None:intergenic 45.0%
CGGAATTAGAAACAGCACAG+CGG + chr1_3:49486475-49486494 None:intergenic 45.0%
AGAAAGTGACTCGAAGACTG+AGG - chr1_3:49486583-49486602 Msa0122700:CDS 45.0%
CAAGATTAACCAACCAGACC+AGG - chr1_3:49486824-49486843 Msa0122700:CDS 45.0%
TCACAAACGTCTTCTTGCTG+TGG - chr1_3:49486867-49486886 Msa0122700:CDS 45.0%
AAGTAGGCGAAGGATGTTGT+TGG + chr1_3:49487141-49487160 None:intergenic 45.0%
AACAACATCCTTCGCCTACT+TGG - chr1_3:49487140-49487159 Msa0122700:CDS 45.0%
CTTAAAATTGATGGGGGGTG+AGG + chr1_3:49487687-49487706 None:intergenic 45.0%
CTGCAAATCCCTCGTTCAAA+TGG - chr1_3:49487717-49487736 Msa0122700:intron 45.0%
GAGTTGCACCATTTGAACGA+GGG + chr1_3:49487728-49487747 None:intergenic 45.0%
AGAGTTGCACCATTTGAACG+AGG + chr1_3:49487729-49487748 None:intergenic 45.0%
!! GCAAGTACGCTTTGAAGTCA+AGG - chr1_3:49487836-49487855 Msa0122700:intron 45.0%
!! CGCTTTGAAGTCAAGGTGTT+TGG - chr1_3:49487843-49487862 Msa0122700:intron 45.0%
GGCTTCAATCGAAGAACTCA+AGG - chr1_3:49488130-49488149 Msa0122700:CDS 45.0%
CGATGAGGAGAAGCTTGATT+AGG + chr1_3:49480568-49480587 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_3:49480917-49480936 Msa0122700:intron 45.0%
!! ATAAGGTGGTTTGGTGGGTA+AGG - chr1_3:49481215-49481234 Msa0122700:intron 45.0%
!! TAAGGTGGTTTGGTGGGTAA+GGG - chr1_3:49481216-49481235 Msa0122700:intron 45.0%
! GTCTTTTGGCAAAATGGCGT+TGG - chr1_3:49481260-49481279 Msa0122700:intron 45.0%
!! CACCATACAGAAGCACTTCT+CGG + chr1_3:49481361-49481380 None:intergenic 45.0%
! GTGGAGGAGATTGGTTCAAA+AGG - chr1_3:49481417-49481436 Msa0122700:intron 45.0%
AAAGGTTGCGAAGTTGAGTG+AGG - chr1_3:49481496-49481515 Msa0122700:intron 45.0%
GTGTTAGAAATGGGGAAGAG+TGG - chr1_3:49481522-49481541 Msa0122700:intron 45.0%
GAAATGGGGAAGAGTGGAAT+TGG - chr1_3:49481528-49481547 Msa0122700:intron 45.0%
ATACCGAGAGAGATAGTTGG+GGG - chr1_3:49481636-49481655 Msa0122700:intron 45.0%
! GTTGGAGGGGATTTTTGTGT+TGG - chr1_3:49481709-49481728 Msa0122700:CDS 45.0%
!! AAGGTGCCAGACTTTTCCAA+AGG + chr1_3:49481775-49481794 None:intergenic 45.0%
TCCTACATAGATTTCCAGCC+CGG - chr1_3:49481824-49481843 Msa0122700:intron 45.0%
TTCCAGCCCGGAATAATTTG+TGG - chr1_3:49481836-49481855 Msa0122700:CDS 45.0%
TTCCACAAATTATTCCGGGC+TGG + chr1_3:49481841-49481860 None:intergenic 45.0%
ACACTACCGTTTGGGTGATT+TGG - chr1_3:49482094-49482113 Msa0122700:intron 45.0%
TGCTTTGCTAGGTAGGAAGT+TGG - chr1_3:49482267-49482286 Msa0122700:intron 45.0%
GCTTTGCTAGGTAGGAAGTT+GGG - chr1_3:49482268-49482287 Msa0122700:intron 45.0%
!!! AGTGCTGTTTTGGGGTTGAT+GGG - chr1_3:49482314-49482333 Msa0122700:CDS 45.0%
GCTGTCGATCGATGTGTATT+GGG - chr1_3:49482351-49482370 Msa0122700:intron 45.0%
CTGTCGATCGATGTGTATTG+GGG - chr1_3:49482352-49482371 Msa0122700:intron 45.0%
TGTCGATCGATGTGTATTGG+GGG - chr1_3:49482353-49482372 Msa0122700:intron 45.0%
AAACAAAACAGAGAACCCGC+AGG + chr1_3:49482481-49482500 None:intergenic 45.0%
CCAGTACCCTAAACTGATAC+TGG + chr1_3:49482510-49482529 None:intergenic 45.0%
! CCAGTATCAGTTTAGGGTAC+TGG - chr1_3:49482507-49482526 Msa0122700:CDS 45.0%
!! CAGTTTAGGGTACTGGATTG+TGG - chr1_3:49482514-49482533 Msa0122700:CDS 45.0%
TAGCTATCCTGGGTAGCTTA+TGG - chr1_3:49482663-49482682 Msa0122700:intron 45.0%
TGGCCCTGTACTTACTAGAA+TGG - chr1_3:49483035-49483054 Msa0122700:intron 45.0%
GGCCCTGTACTTACTAGAAT+GGG - chr1_3:49483036-49483055 Msa0122700:intron 45.0%
TCGCTTACCATCAAGCTCTA+TGG + chr1_3:49483096-49483115 None:intergenic 45.0%
CGGTTTCGAACCATTACAAC+TGG - chr1_3:49483152-49483171 Msa0122700:intron 45.0%
CGGATATCCAACTACTTCAC+AGG + chr1_3:49483670-49483689 None:intergenic 45.0%
! TGTCCCGGTGTCCTATATTT+TGG + chr1_3:49484277-49484296 None:intergenic 45.0%
GCTTCATAGGTCTAGGTATG+AGG + chr1_3:49484300-49484319 None:intergenic 45.0%
! TGTCCCGGTGTCCTATATTT+TGG + chr1_3:49484277-49484296 None:intergenic 45.0%
! TACACAAGTATGAGGTGTCC+CGG + chr1_3:49484386-49484405 None:intergenic 45.0%
! GAATTCTGGAGGAAGAGAAG+AGG + chr1_3:49484593-49484612 None:intergenic 45.0%
CTGTCCTAACAGAATTCTGG+AGG + chr1_3:49484604-49484623 None:intergenic 45.0%
CAGCTGTCCTAACAGAATTC+TGG + chr1_3:49484607-49484626 None:intergenic 45.0%
AGTGTCAGTTGTCCTAGGTT+AGG + chr1_3:49484631-49484650 None:intergenic 45.0%
ACACAAGTGTCAGTTGTCCT+AGG + chr1_3:49484636-49484655 None:intergenic 45.0%
TCAGTGACATGAGAAGAGGT+AGG + chr1_3:49484824-49484843 None:intergenic 45.0%
TCGATCAGTGACATGAGAAG+AGG + chr1_3:49484828-49484847 None:intergenic 45.0%
TGTCACTGATCGAGTTACTG+CGG - chr1_3:49484835-49484854 Msa0122700:intron 45.0%
AGTTGTCCGAGACAAGTGTT+TGG - chr1_3:49485220-49485239 Msa0122700:intron 45.0%
TCTTGGCCAAACACTTGTCT+CGG + chr1_3:49485229-49485248 None:intergenic 45.0%
!! CGTGTTCAAGGCTTGCTAAT+AGG - chr1_3:49485275-49485294 Msa0122700:intron 45.0%
ATGGGAAGATGAAGATCCCT+TGG + chr1_3:49485359-49485378 None:intergenic 45.0%
GAGAACAAGGCTCAAGTTAC+TGG - chr1_3:49485561-49485580 Msa0122700:CDS 45.0%
TATTGGGCAGCTTATTACCG+TGG - chr1_3:49485858-49485877 Msa0122700:intron 45.0%
AGCTTATTACCGTGGAGCAA+TGG - chr1_3:49485866-49485885 Msa0122700:intron 45.0%
GCTTATTACCGTGGAGCAAT+GGG - chr1_3:49485867-49485886 Msa0122700:intron 45.0%
GCAAAATACCCATTGCTCCA+CGG + chr1_3:49485878-49485897 None:intergenic 45.0%
GGCGCAAAACTAAAACCAGA+AGG + chr1_3:49485953-49485972 None:intergenic 45.0%
CCCTTTGCTTTCATCCATGT+CGG + chr1_3:49486243-49486262 None:intergenic 45.0%
CCGACATGGATGAAAGCAAA+GGG - chr1_3:49486240-49486259 Msa0122700:intron 45.0%
GGACAAAGAGTAAGTGTGTG+AGG + chr1_3:49486270-49486289 None:intergenic 45.0%
!! AGAGCTTGACCCTTTGAAGT+TGG + chr1_3:49486376-49486395 None:intergenic 45.0%
AACTTCAAAGGGTCAAGCTC+TGG - chr1_3:49486375-49486394 Msa0122700:CDS 45.0%
! CAAGCTCTGGCAGATGAATA+CGG - chr1_3:49486388-49486407 Msa0122700:intron 45.0%
TAGAAACAGCACAGCGGTTT+CGG + chr1_3:49486469-49486488 None:intergenic 45.0%
CGGAATTAGAAACAGCACAG+CGG + chr1_3:49486475-49486494 None:intergenic 45.0%
AGAAAGTGACTCGAAGACTG+AGG - chr1_3:49486583-49486602 Msa0122700:CDS 45.0%
CAAGATTAACCAACCAGACC+AGG - chr1_3:49486824-49486843 Msa0122700:CDS 45.0%
TCACAAACGTCTTCTTGCTG+TGG - chr1_3:49486867-49486886 Msa0122700:CDS 45.0%
AAGTAGGCGAAGGATGTTGT+TGG + chr1_3:49487141-49487160 None:intergenic 45.0%
AACAACATCCTTCGCCTACT+TGG - chr1_3:49487140-49487159 Msa0122700:CDS 45.0%
CTTAAAATTGATGGGGGGTG+AGG + chr1_3:49487687-49487706 None:intergenic 45.0%
CTGCAAATCCCTCGTTCAAA+TGG - chr1_3:49487717-49487736 Msa0122700:intron 45.0%
GAGTTGCACCATTTGAACGA+GGG + chr1_3:49487728-49487747 None:intergenic 45.0%
AGAGTTGCACCATTTGAACG+AGG + chr1_3:49487729-49487748 None:intergenic 45.0%
!! GCAAGTACGCTTTGAAGTCA+AGG - chr1_3:49487836-49487855 Msa0122700:intron 45.0%
!! CGCTTTGAAGTCAAGGTGTT+TGG - chr1_3:49487843-49487862 Msa0122700:intron 45.0%
GGCTTCAATCGAAGAACTCA+AGG - chr1_3:49488130-49488149 Msa0122700:CDS 45.0%
!! AAATAATAAATAATTGATAT+GGG + chr1_3:49484105-49484124 None:intergenic 5.0%
!! AAAATAATAAATAATTGATA+TGG + chr1_3:49484106-49484125 None:intergenic 5.0%
!! AAATAATAAATAATTGATAT+GGG + chr1_3:49484105-49484124 None:intergenic 5.0%
!! AAAATAATAAATAATTGATA+TGG + chr1_3:49484106-49484125 None:intergenic 5.0%
TAATCGGATCGAGCTCTTGC+AGG + chr1_3:49480539-49480558 None:intergenic 50.0%
CTTCTCCTCATCGGTGATAG+CGG - chr1_3:49480575-49480594 Msa0122700:CDS 50.0%
TTGATCGGAGTGGAGTCACT+TGG - chr1_3:49481335-49481354 Msa0122700:intron 50.0%
!! CGAGAAGTGCTTCTGTATGG+TGG - chr1_3:49481359-49481378 Msa0122700:intron 50.0%
TGGAGGATTCAGTATTCGGG+TGG - chr1_3:49481398-49481417 Msa0122700:intron 50.0%
AGGATTCAGTATTCGGGTGG+AGG - chr1_3:49481401-49481420 Msa0122700:intron 50.0%
AGTATTCGGGTGGAGGAGAT+TGG - chr1_3:49481408-49481427 Msa0122700:intron 50.0%
CTGTAATAGCAAGCAACCGC+AGG + chr1_3:49481472-49481491 None:intergenic 50.0%
AGTGGAATTGGACGTGGTTG+TGG - chr1_3:49481540-49481559 Msa0122700:intron 50.0%
ATTGGACGTGGTTGTGGAGA+AGG - chr1_3:49481546-49481565 Msa0122700:intron 50.0%
CTACCCCCAACTATCTCTCT+CGG + chr1_3:49481642-49481661 None:intergenic 50.0%
AGATAGTTGGGGGTAGAGAC+CGG - chr1_3:49481646-49481665 Msa0122700:intron 50.0%
! TGGAGGCCTTTGGAAAAGTC+TGG - chr1_3:49481766-49481785 Msa0122700:intron 50.0%
GTCTGGCACCTTCAAAAGAG+TGG - chr1_3:49481783-49481802 Msa0122700:intron 50.0%
! TCCGGGCTGGAAATCTATGT+AGG + chr1_3:49481828-49481847 None:intergenic 50.0%
! ACACACTCTCTAGAGGCTTC+GGG + chr1_3:49481880-49481899 None:intergenic 50.0%
! GACACACTCTCTAGAGGCTT+CGG + chr1_3:49481881-49481900 None:intergenic 50.0%
!! TGAGGTTGATGCAATGGTGG+AGG - chr1_3:49482155-49482174 Msa0122700:CDS 50.0%
TCAAGCTCCGCTTCCATAAG+AGG + chr1_3:49482191-49482210 None:intergenic 50.0%
GAAGCGGAGCTTGAGTAGAT+TGG - chr1_3:49482197-49482216 Msa0122700:intron 50.0%
GTACGGGAGATTGCTTTGCT+AGG - chr1_3:49482256-49482275 Msa0122700:intron 50.0%
GGGAGATTGCTTTGCTAGGT+AGG - chr1_3:49482260-49482279 Msa0122700:intron 50.0%
GAAGTTGGGATTGCTGTGCA+TGG - chr1_3:49482282-49482301 Msa0122700:intron 50.0%
!!! CAGTGCTGTTTTGGGGTTGA+TGG - chr1_3:49482313-49482332 Msa0122700:CDS 50.0%
GGCTGTCGATCGATGTGTAT+TGG - chr1_3:49482350-49482369 Msa0122700:intron 50.0%
!!! CTCTTTTTTGGACGGGGTCA+GGG - chr1_3:49482412-49482431 Msa0122700:intron 50.0%
!!! TCTTTTTTGGACGGGGTCAG+GGG - chr1_3:49482413-49482432 Msa0122700:intron 50.0%
! TTGTTCATGAGGTGCTCCTG+CGG - chr1_3:49482462-49482481 Msa0122700:CDS 50.0%
! CTCTTTTTGCCCGGTCATCA+TGG - chr1_3:49482557-49482576 Msa0122700:intron 50.0%
TCACAAGTCGCCATGATGAC+CGG + chr1_3:49482570-49482589 None:intergenic 50.0%
GTCATCATGGCGACTTGTGA+TGG - chr1_3:49482570-49482589 Msa0122700:intron 50.0%
CATGGCGACTTGTGATGGTA+CGG - chr1_3:49482575-49482594 Msa0122700:intron 50.0%
CACAAAGAGAACCTACCCGA+TGG + chr1_3:49482960-49482979 None:intergenic 50.0%
TTGCAAATATGGGACACGGC+TGG - chr1_3:49483122-49483141 Msa0122700:intron 50.0%
GGAGTCGAGTGATAAGGAGA+TGG + chr1_3:49484025-49484044 None:intergenic 50.0%
TAGGACAGCTGTCCTAACCT+AGG - chr1_3:49484616-49484635 Msa0122700:intron 50.0%
ATGAGAAGAGGTAGGAGGAG+TGG + chr1_3:49484816-49484835 None:intergenic 50.0%
GTGACATGAGAAGAGGTAGG+AGG + chr1_3:49484821-49484840 None:intergenic 50.0%
AGTCTTTGCTCGCGTGTTCA+AGG - chr1_3:49485263-49485282 Msa0122700:intron 50.0%
AGGTGTCTGACATGTGTCCA+AGG - chr1_3:49485339-49485358 Msa0122700:intron 50.0%
GGTGTCTGACATGTGTCCAA+GGG - chr1_3:49485340-49485359 Msa0122700:intron 50.0%
GGGATGCCTCTTCAACACTT+TGG + chr1_3:49485596-49485615 None:intergenic 50.0%
GCCGACATGGATGAAAGCAA+AGG - chr1_3:49486239-49486258 Msa0122700:intron 50.0%
CCTCGCTCAAATGTAGTTGC+AGG + chr1_3:49486908-49486927 None:intergenic 50.0%
CCTGCAACTACATTTGAGCG+AGG - chr1_3:49486905-49486924 Msa0122700:CDS 50.0%
CTGGAAAAAGTCTGGGTGCA+TGG + chr1_3:49487878-49487897 None:intergenic 50.0%
AGGGGAAACTTTCAAGGCGT+TGG - chr1_3:49488084-49488103 Msa0122700:intron 50.0%
CGATTGAAGCCTCCTCTTCA+AGG + chr1_3:49488121-49488140 None:intergenic 50.0%
TAATCGGATCGAGCTCTTGC+AGG + chr1_3:49480539-49480558 None:intergenic 50.0%
CTTCTCCTCATCGGTGATAG+CGG - chr1_3:49480575-49480594 Msa0122700:CDS 50.0%
TTGATCGGAGTGGAGTCACT+TGG - chr1_3:49481335-49481354 Msa0122700:intron 50.0%
!! CGAGAAGTGCTTCTGTATGG+TGG - chr1_3:49481359-49481378 Msa0122700:intron 50.0%
TGGAGGATTCAGTATTCGGG+TGG - chr1_3:49481398-49481417 Msa0122700:intron 50.0%
AGGATTCAGTATTCGGGTGG+AGG - chr1_3:49481401-49481420 Msa0122700:intron 50.0%
AGTATTCGGGTGGAGGAGAT+TGG - chr1_3:49481408-49481427 Msa0122700:intron 50.0%
CTGTAATAGCAAGCAACCGC+AGG + chr1_3:49481472-49481491 None:intergenic 50.0%
AGTGGAATTGGACGTGGTTG+TGG - chr1_3:49481540-49481559 Msa0122700:intron 50.0%
ATTGGACGTGGTTGTGGAGA+AGG - chr1_3:49481546-49481565 Msa0122700:intron 50.0%
CTACCCCCAACTATCTCTCT+CGG + chr1_3:49481642-49481661 None:intergenic 50.0%
AGATAGTTGGGGGTAGAGAC+CGG - chr1_3:49481646-49481665 Msa0122700:intron 50.0%
! TGGAGGCCTTTGGAAAAGTC+TGG - chr1_3:49481766-49481785 Msa0122700:intron 50.0%
GTCTGGCACCTTCAAAAGAG+TGG - chr1_3:49481783-49481802 Msa0122700:intron 50.0%
! TCCGGGCTGGAAATCTATGT+AGG + chr1_3:49481828-49481847 None:intergenic 50.0%
! ACACACTCTCTAGAGGCTTC+GGG + chr1_3:49481880-49481899 None:intergenic 50.0%
! GACACACTCTCTAGAGGCTT+CGG + chr1_3:49481881-49481900 None:intergenic 50.0%
!! TGAGGTTGATGCAATGGTGG+AGG - chr1_3:49482155-49482174 Msa0122700:CDS 50.0%
TCAAGCTCCGCTTCCATAAG+AGG + chr1_3:49482191-49482210 None:intergenic 50.0%
GAAGCGGAGCTTGAGTAGAT+TGG - chr1_3:49482197-49482216 Msa0122700:intron 50.0%
GTACGGGAGATTGCTTTGCT+AGG - chr1_3:49482256-49482275 Msa0122700:intron 50.0%
GGGAGATTGCTTTGCTAGGT+AGG - chr1_3:49482260-49482279 Msa0122700:intron 50.0%
GAAGTTGGGATTGCTGTGCA+TGG - chr1_3:49482282-49482301 Msa0122700:intron 50.0%
!!! CAGTGCTGTTTTGGGGTTGA+TGG - chr1_3:49482313-49482332 Msa0122700:CDS 50.0%
GGCTGTCGATCGATGTGTAT+TGG - chr1_3:49482350-49482369 Msa0122700:intron 50.0%
!!! CTCTTTTTTGGACGGGGTCA+GGG - chr1_3:49482412-49482431 Msa0122700:intron 50.0%
!!! TCTTTTTTGGACGGGGTCAG+GGG - chr1_3:49482413-49482432 Msa0122700:intron 50.0%
! TTGTTCATGAGGTGCTCCTG+CGG - chr1_3:49482462-49482481 Msa0122700:CDS 50.0%
! CTCTTTTTGCCCGGTCATCA+TGG - chr1_3:49482557-49482576 Msa0122700:intron 50.0%
TCACAAGTCGCCATGATGAC+CGG + chr1_3:49482570-49482589 None:intergenic 50.0%
GTCATCATGGCGACTTGTGA+TGG - chr1_3:49482570-49482589 Msa0122700:intron 50.0%
CATGGCGACTTGTGATGGTA+CGG - chr1_3:49482575-49482594 Msa0122700:intron 50.0%
CACAAAGAGAACCTACCCGA+TGG + chr1_3:49482960-49482979 None:intergenic 50.0%
TTGCAAATATGGGACACGGC+TGG - chr1_3:49483122-49483141 Msa0122700:intron 50.0%
GGAGTCGAGTGATAAGGAGA+TGG + chr1_3:49484025-49484044 None:intergenic 50.0%
TAGGACAGCTGTCCTAACCT+AGG - chr1_3:49484616-49484635 Msa0122700:intron 50.0%
ATGAGAAGAGGTAGGAGGAG+TGG + chr1_3:49484816-49484835 None:intergenic 50.0%
GTGACATGAGAAGAGGTAGG+AGG + chr1_3:49484821-49484840 None:intergenic 50.0%
AGTCTTTGCTCGCGTGTTCA+AGG - chr1_3:49485263-49485282 Msa0122700:intron 50.0%
AGGTGTCTGACATGTGTCCA+AGG - chr1_3:49485339-49485358 Msa0122700:intron 50.0%
GGTGTCTGACATGTGTCCAA+GGG - chr1_3:49485340-49485359 Msa0122700:intron 50.0%
GGGATGCCTCTTCAACACTT+TGG + chr1_3:49485596-49485615 None:intergenic 50.0%
GCCGACATGGATGAAAGCAA+AGG - chr1_3:49486239-49486258 Msa0122700:intron 50.0%
CCTCGCTCAAATGTAGTTGC+AGG + chr1_3:49486908-49486927 None:intergenic 50.0%
CCTGCAACTACATTTGAGCG+AGG - chr1_3:49486905-49486924 Msa0122700:CDS 50.0%
CTGGAAAAAGTCTGGGTGCA+TGG + chr1_3:49487878-49487897 None:intergenic 50.0%
AGGGGAAACTTTCAAGGCGT+TGG - chr1_3:49488084-49488103 Msa0122700:intron 50.0%
CGATTGAAGCCTCCTCTTCA+AGG + chr1_3:49488121-49488140 None:intergenic 50.0%
ACGAACCGCTATCACCGATG+AGG + chr1_3:49480583-49480602 None:intergenic 55.0%
GTGGGTAAGGGATGTGAGAG+TGG - chr1_3:49481228-49481247 Msa0122700:intron 55.0%
!! GGCCGAGAAGTGCTTCTGTA+TGG - chr1_3:49481356-49481375 Msa0122700:intron 55.0%
GGGAAGAGTGGAATTGGACG+TGG - chr1_3:49481534-49481553 Msa0122700:intron 55.0%
GAGAACACACCTCCACCTTC+CGG + chr1_3:49481668-49481687 None:intergenic 55.0%
!!! GCTGTTTTGGGGTTGATGGG+CGG - chr1_3:49482317-49482336 Msa0122700:CDS 55.0%
GGGGGTAACCAAATACTGGG+TGG - chr1_3:49482371-49482390 Msa0122700:intron 55.0%
CCTGACCCCGTCCAAAAAAG+AGG + chr1_3:49482414-49482433 None:intergenic 55.0%
!!! CCTCTTTTTTGGACGGGGTC+AGG - chr1_3:49482411-49482430 Msa0122700:intron 55.0%
! TGTTCATGAGGTGCTCCTGC+GGG - chr1_3:49482463-49482482 Msa0122700:CDS 55.0%
CACAAGTCGCCATGATGACC+GGG + chr1_3:49482569-49482588 None:intergenic 55.0%
! GGTCTAGGTATGAGGTGTCC+CGG + chr1_3:49484292-49484311 None:intergenic 55.0%
! GTTTGGCCAAGAGCATGCGT+CGG - chr1_3:49485237-49485256 Msa0122700:intron 55.0%
! TTGGAGCACCAAGTAGGCGA+AGG + chr1_3:49487151-49487170 None:intergenic 55.0%
ACGAACCGCTATCACCGATG+AGG + chr1_3:49480583-49480602 None:intergenic 55.0%
GTGGGTAAGGGATGTGAGAG+TGG - chr1_3:49481228-49481247 Msa0122700:intron 55.0%
!! GGCCGAGAAGTGCTTCTGTA+TGG - chr1_3:49481356-49481375 Msa0122700:intron 55.0%
GGGAAGAGTGGAATTGGACG+TGG - chr1_3:49481534-49481553 Msa0122700:intron 55.0%
GAGAACACACCTCCACCTTC+CGG + chr1_3:49481668-49481687 None:intergenic 55.0%
!!! GCTGTTTTGGGGTTGATGGG+CGG - chr1_3:49482317-49482336 Msa0122700:CDS 55.0%
GGGGGTAACCAAATACTGGG+TGG - chr1_3:49482371-49482390 Msa0122700:intron 55.0%
CCTGACCCCGTCCAAAAAAG+AGG + chr1_3:49482414-49482433 None:intergenic 55.0%
!!! CCTCTTTTTTGGACGGGGTC+AGG - chr1_3:49482411-49482430 Msa0122700:intron 55.0%
! TGTTCATGAGGTGCTCCTGC+GGG - chr1_3:49482463-49482482 Msa0122700:CDS 55.0%
CACAAGTCGCCATGATGACC+GGG + chr1_3:49482569-49482588 None:intergenic 55.0%
! GGTCTAGGTATGAGGTGTCC+CGG + chr1_3:49484292-49484311 None:intergenic 55.0%
! GTTTGGCCAAGAGCATGCGT+CGG - chr1_3:49485237-49485256 Msa0122700:intron 55.0%
! TTGGAGCACCAAGTAGGCGA+AGG + chr1_3:49487151-49487170 None:intergenic 55.0%
TCGGATCGAGCTCTTGCAGG+TGG + chr1_3:49480536-49480555 None:intergenic 60.0%
AGTTGGGGGTAGAGACCGGA+AGG - chr1_3:49481650-49481669 Msa0122700:intron 60.0%
!!! GTTTTGGGGTTGATGGGCGG+TGG - chr1_3:49482320-49482339 Msa0122700:CDS 60.0%
! TTGATGGGCGGTGGTGTACG+TGG - chr1_3:49482329-49482348 Msa0122700:CDS 60.0%
GGAGGAGTGGCCAATAGCCA+TGG + chr1_3:49484803-49484822 None:intergenic 60.0%
! ACTGTGCCGACGCATGCTCT+TGG + chr1_3:49485246-49485265 None:intergenic 60.0%
AGTGGGGAACAAGGCCGACA+TGG - chr1_3:49486226-49486245 Msa0122700:intron 60.0%
AACCAACCAGACCAGGGAGC+TGG - chr1_3:49486831-49486850 Msa0122700:CDS 60.0%
TCGGATCGAGCTCTTGCAGG+TGG + chr1_3:49480536-49480555 None:intergenic 60.0%
AGTTGGGGGTAGAGACCGGA+AGG - chr1_3:49481650-49481669 Msa0122700:intron 60.0%
!!! GTTTTGGGGTTGATGGGCGG+TGG - chr1_3:49482320-49482339 Msa0122700:CDS 60.0%
! TTGATGGGCGGTGGTGTACG+TGG - chr1_3:49482329-49482348 Msa0122700:CDS 60.0%
GGAGGAGTGGCCAATAGCCA+TGG + chr1_3:49484803-49484822 None:intergenic 60.0%
! ACTGTGCCGACGCATGCTCT+TGG + chr1_3:49485246-49485265 None:intergenic 60.0%
AGTGGGGAACAAGGCCGACA+TGG - chr1_3:49486226-49486245 Msa0122700:intron 60.0%
AACCAACCAGACCAGGGAGC+TGG - chr1_3:49486831-49486850 Msa0122700:CDS 60.0%
TGGGGGTAGAGACCGGAAGG+TGG - chr1_3:49481653-49481672 Msa0122700:intron 65.0%
GGGTAGAGACCGGAAGGTGG+AGG - chr1_3:49481656-49481675 Msa0122700:intron 65.0%
! GGGACACGGCTGGTCAAGAG+CGG - chr1_3:49483132-49483151 Msa0122700:intron 65.0%
AGCCAGCTCCCTGGTCTGGT+TGG + chr1_3:49486836-49486855 None:intergenic 65.0%
CTTGAGCAGAGCCAGCTCCC+TGG + chr1_3:49486845-49486864 None:intergenic 65.0%
TGGGGGTAGAGACCGGAAGG+TGG - chr1_3:49481653-49481672 Msa0122700:intron 65.0%
GGGTAGAGACCGGAAGGTGG+AGG - chr1_3:49481656-49481675 Msa0122700:intron 65.0%
! GGGACACGGCTGGTCAAGAG+CGG - chr1_3:49483132-49483151 Msa0122700:intron 65.0%
AGCCAGCTCCCTGGTCTGGT+TGG + chr1_3:49486836-49486855 None:intergenic 65.0%
CTTGAGCAGAGCCAGCTCCC+TGG + chr1_3:49486845-49486864 None:intergenic 65.0%
GCAGAGCCAGCTCCCTGGTC+TGG + chr1_3:49486840-49486859 None:intergenic 70.0%
GCAGAGCCAGCTCCCTGGTC+TGG + chr1_3:49486840-49486859 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 49480524 49488193 49480524 ID=Msa0122700;Name=Msa0122700
chr1_3 mRNA 49480524 49488193 49480524 ID=Msa0122700-mRNA-1;Parent=Msa0122700;Name=Msa0122700-mRNA-1;_AED=0.69;_eAED=0.70;_QI=0|0.26|0.25|0.62|1|1|16|0|609
chr1_3 exon 49488117 49488193 49488117 ID=Msa0122700-mRNA-1:exon:15058;Parent=Msa0122700-mRNA-1
chr1_3 exon 49487275 49487480 49487275 ID=Msa0122700-mRNA-1:exon:15057;Parent=Msa0122700-mRNA-1
chr1_3 exon 49487089 49487225 49487089 ID=Msa0122700-mRNA-1:exon:15056;Parent=Msa0122700-mRNA-1
chr1_3 exon 49486771 49487001 49486771 ID=Msa0122700-mRNA-1:exon:15055;Parent=Msa0122700-mRNA-1
chr1_3 exon 49486482 49486672 49486482 ID=Msa0122700-mRNA-1:exon:15054;Parent=Msa0122700-mRNA-1
chr1_3 exon 49486245 49486401 49486245 ID=Msa0122700-mRNA-1:exon:15053;Parent=Msa0122700-mRNA-1
chr1_3 exon 49485750 49485826 49485750 ID=Msa0122700-mRNA-1:exon:15052;Parent=Msa0122700-mRNA-1
chr1_3 exon 49485544 49485644 49485544 ID=Msa0122700-mRNA-1:exon:15051;Parent=Msa0122700-mRNA-1
chr1_3 exon 49482784 49482849 49482784 ID=Msa0122700-mRNA-1:exon:15050;Parent=Msa0122700-mRNA-1
chr1_3 exon 49482419 49482552 49482419 ID=Msa0122700-mRNA-1:exon:15049;Parent=Msa0122700-mRNA-1
chr1_3 exon 49482288 49482350 49482288 ID=Msa0122700-mRNA-1:exon:15048;Parent=Msa0122700-mRNA-1
chr1_3 exon 49482113 49482205 49482113 ID=Msa0122700-mRNA-1:exon:15047;Parent=Msa0122700-mRNA-1
chr1_3 exon 49481829 49481904 49481829 ID=Msa0122700-mRNA-1:exon:15046;Parent=Msa0122700-mRNA-1
chr1_3 exon 49481708 49481730 49481708 ID=Msa0122700-mRNA-1:exon:15045;Parent=Msa0122700-mRNA-1
chr1_3 exon 49481556 49481609 49481556 ID=Msa0122700-mRNA-1:exon:15044;Parent=Msa0122700-mRNA-1
chr1_3 exon 49480524 49480667 49480524 ID=Msa0122700-mRNA-1:exon:15043;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49488117 49488193 49488117 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49487275 49487480 49487275 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49487089 49487225 49487089 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49486771 49487001 49486771 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49486482 49486672 49486482 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49486245 49486401 49486245 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49485750 49485826 49485750 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49485544 49485644 49485544 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49482784 49482849 49482784 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49482419 49482552 49482419 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49482288 49482350 49482288 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49482113 49482205 49482113 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49481829 49481904 49481829 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49481708 49481730 49481708 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49481556 49481609 49481556 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
chr1_3 CDS 49480524 49480667 49480524 ID=Msa0122700-mRNA-1:cds;Parent=Msa0122700-mRNA-1
Gene Sequence

>Msa0122700

ATGGCTGCTCCACCTGCAAGAGCTCGATCCGATTACGATTACCTAATCAAGCTTCTCCTCATCGGTGATAGCGGTTCGGATGTGAGAGTGGTCAACTTGAGTCTTTTGGCAAAATGGCGTTGGCGTATTCTACAACATGATTCTCCTTTGTGGAAAAATGTCCTTGTCAAAAAGTTTGATCGGAGTGGAGTCACTTGGCCGAGAAGTGCTTCTGTATGGTGGAGAGATTTAACTTCATTGGAGGATTCAGTATTCGGGTGGAGGAGATTGGTTCAAAAGGGAAATAGAAAGGTTGCGAAGTTGAGTGAGGTTTGTGTTAGAAATGGGGAAGAGTGGAATTGGACGTGGTTGTGGAGAAGGTTGTTGTTTGTATGGGATGAGAGTTTACTTGAGCAATTATTGATGTTTTTGAATGATTTGGGGATTTTTGTGTTGGAAAATGATCTAGGTGAATTGGAAAAAATGATTTTTGGAGGCCTTTGGAAAAGTCTGGCACCTTCAAAAGAGTGGCTTTCTCTTGGAAAATGCTCCTACATAGATTTCCAGCCCGGAATAATTTGTGGAAAAGGCATGCTATTGCTCCCGAAGCCTCTAGAGAGTGTGTCTTTTGTGGGAATGATGAGGAATCTTCTATCCACCTTTTTCTTCATTGATGTGCTCAAAATAAAAAGTGGAAAAAAAGGGTTTTGGCTTATTTGGCACACTACCGTTTGGGTGATTTGGAGTATGAGAAATAGGAAGATTTTCAAGAATCGAGATTTTGAGGTTGATGCAATGGTGGAGGAAATCAAAGTCCTCTTATGGAAGCGGAGCTTGAGTAGATTGGAAGCATCACCATGCATTGCTGTTTTGGGGTTGATGGGCGGTGGTGTACGTGGCTGTCGATCGATGTGTATTGGGGGTAACCAAATACTGGGTGGTTGTTTTGATGTGTTTTCCTCTTTTTTGGACGGGGTCAGGGGTGTGTTTTTTGTCCCTGTTTGTTGCGTTGTTCATGAGGTGTGGGTAAAAGTTGCCTTCTATTACGTTTCTCAGATGGTTCATTCACAACTAGTTTTATCACAACCATCGGGTAGCATTGATTTCAAAATAAGGACCATAGAGCTTGATGGTAAGCGAATCAAGTTGCAAATATGGGACACGGCTGGTCAAGAGCGGTTTCGAACCATTACAACTGCTTATTACCGTGGAGCAATGGGTATTTTGCTTGTGTATGATGTCACCGATGAGTCATCTTTTAACAACATCAAAAATTGGATTCGCAACATTGAGCAGCATGCTTCTGACAATGTCAACAAAATATTAGTGGGGAACAAGGCCGACATGGATGAAAGCAAAGGGTTTGCCTCACACACTTACTCTTTGTCCATCCTTTTGGCTGTTCCAACTTCAAAGGGTCAAGCTCTGGCAGATGAATACGGCATCAAATTTTTCGAAACTAGTGCAAAAACTAATATGAATGTAGATGAGGTTTTCTTTTCAGTAGCTCGGGACATCAAACAAAGACTTGCAGAAAGTGACTCGAAGACTGAGCCCCAAACACTCAAGATTAACCAACCAGACCAGGGAGCTGGCTCTGCTCAAGCATCACAAACGTCTTCTTGCTGTGTTGCTACTTATTGGGTGTTAATGGAGCCTGACTATACACAATGTTTGCTAAAACCAACAACATCCTTCGCCTACTTGATACTCTACAAGGGTGAAATTCTAGGTTATAGAAAGGGGAAACTTTCAAGGCGTTGGATTTGTTCAATCCTTGAAGAGGAGGCTTCAATCGAAGAACTCAAGGTGGCAAATTTTCGGGTTCAAGAAGTAACAAAAAGGCCATGA
Protein sequence

>Msa0122700

MAAPPARARSDYDYLIKLLLIGDSGSDVRVVNLSLLAKWRWRILQHDSPLWKNVLVKKFDRSGVTWPRSASVWWRDLTSLEDSVFGWRRLVQKGNRKVAKLSEVCVRNGEEWNWTWLWRRLLFVWDESLLEQLLMFLNDLGIFVLENDLGELEKMIFGGLWKSLAPSKEWLSLGKCSYIDFQPGIICGKGMLLLPKPLESVSFVGMMRNLLSTFFFIDVLKIKSGKKGFWLIWHTTVWVIWSMRNRKIFKNRDFEVDAMVEEIKVLLWKRSLSRLEASPCIAVLGLMGGGVRGCRSMCIGGNQILGGCFDVFSSFLDGVRGVFFVPVCCVVHEVWVKVAFYYVSQMVHSQLVLSQPSGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKGFASHTYSLSILLAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSVARDIKQRLAESDSKTEPQTLKINQPDQGAGSAQASQTSSCCVATYWVLMEPDYTQCLLKPTTSFAYLILYKGEILGYRKGKLSRRWICSILEEEASIEELKVANFRVQEVTKRP*