AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0534380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0534380 MtrunA17_Chr4g0008321 84.524 336 16 3 1 307 1 329 0.0 533
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0534380 AT3G09210.1 50.000 318 128 6 14 305 18 330 1.97e-94 283

Find 75 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCATCTGACTTATTAAA+AGG 0.132612 4_1:+9850904 Msa0534380:three_prime_UTR
ATCCGATTCTAACTCTTTAT+TGG 0.164470 4_1:-9849669 None:intergenic
AGATTGGTATGTTTGGAAAT+TGG 0.264380 4_1:+9846150 Msa0534380:five_prime_UTR
TCCGATTCTAACTCTTTATT+GGG 0.274238 4_1:-9849668 None:intergenic
TGTGACTGTTAGTTGGTTAG+AGG 0.282285 4_1:-9849741 None:intergenic
GAAGGTGTTGGTGGCTTTAT+TGG 0.283047 4_1:+9848026 Msa0534380:CDS
GCAGAACCTGTGACAAGTTT+AGG 0.296638 4_1:-9849791 None:intergenic
TGAAGCTCTTGCTCGTTCTT+TGG 0.300864 4_1:+9846537 Msa0534380:CDS
GGAGATTGAGAGAGGGAGTT+TGG 0.303362 4_1:-9846269 None:intergenic
TTAATAAGTCAGATGAATAT+TGG 0.310318 4_1:-9850900 None:intergenic
TGTTCGTGTTTCTCGTGTTA+AGG 0.330776 4_1:+9846501 Msa0534380:CDS
TCACCAGAGATTGGTATGTT+TGG 0.340199 4_1:+9846143 Msa0534380:five_prime_UTR
GCCAGTAGCTGAGGATGATA+TGG 0.369363 4_1:+9849547 Msa0534380:CDS
TCATCCTCAGCTACTGGCCT+TGG 0.387686 4_1:-9849542 None:intergenic
CTTGATAATCTCATGAAGTT+AGG 0.396459 4_1:+9846463 Msa0534380:CDS
GTTCGTGTTTCTCGTGTTAA+GGG 0.401772 4_1:+9846502 Msa0534380:CDS
GGAGGTGGAGGTGACGGAGG+TGG 0.403354 4_1:-9846293 None:intergenic
GATAGAAGTAGAAGATGAAA+GGG 0.403401 4_1:+9846188 Msa0534380:exon
AAAATCAAAACCTCTGTTCC+CGG 0.404481 4_1:+9847944 Msa0534380:CDS
TGCTTACGTATTTCCAACCT+TGG 0.434057 4_1:-9848051 None:intergenic
CTTCTTCTGTGACTGTTAGT+TGG 0.434285 4_1:-9849748 None:intergenic
CAAACCTTAAAGTCGATATC+AGG 0.436160 4_1:-9846571 None:intergenic
AAAATGTGGCTGCAATGTTA+AGG 0.441283 4_1:+9850828 Msa0534380:three_prime_UTR
AATAATAAATCACCAGAGAT+TGG 0.441824 4_1:+9846134 Msa0534380:five_prime_UTR
GATTGAGAGAGGGAGTTTGG+TGG 0.444243 4_1:-9846266 None:intergenic
GAGAGAGCAACACAACAAAC+TGG 0.444469 4_1:+9846368 Msa0534380:CDS
TGACTTATTAAAAGGGATAG+AGG 0.447274 4_1:+9850912 Msa0534380:three_prime_UTR
GGTAGATAGAAGCGTGGTGG+TGG 0.447975 4_1:-9846235 None:intergenic
GATACAAGTGATACAATTGC+AGG 0.455207 4_1:-9850863 None:intergenic
GGTGGAGGTGACGGAGGTGG+CGG 0.456125 4_1:-9846290 None:intergenic
TATGGAAGCAATCTTCAAAC+AGG 0.463026 4_1:+9849565 Msa0534380:CDS
TCCATATCATCCTCAGCTAC+TGG 0.464176 4_1:-9849548 None:intergenic
GGAGGAGGTGGAGGTGACGG+AGG 0.472236 4_1:-9846296 None:intergenic
ATGTTTGGAAATTGGAACTT+TGG 0.472948 4_1:+9846158 Msa0534380:five_prime_UTR
ATTCATCTGACTTATTAAAA+GGG 0.476930 4_1:+9850905 Msa0534380:three_prime_UTR
AGATAGAAGTAGAAGATGAA+AGG 0.478834 4_1:+9846187 Msa0534380:exon
GGCTTTATTGGATCCAAGGT+TGG 0.482109 4_1:+9848038 Msa0534380:CDS
AGAAAGGCTGTCGTAAACTC+TGG 0.484840 4_1:+9849641 Msa0534380:CDS
GGGTGCTTACGCTTCACCTA+TGG 0.496838 4_1:+9846209 Msa0534380:CDS
TAACGGCATTAGTTAGTCTC+TGG 0.497824 4_1:-9850543 None:intergenic
GGGAGTTTGGTGGAGAGAGA+TGG 0.498555 4_1:-9846256 None:intergenic
GAACAATTTCACTAACATCT+AGG 0.499446 4_1:-9850521 None:intergenic
TTTCCAAACATACCAATCTC+TGG 0.501709 4_1:-9846146 None:intergenic
CTAACTTCATGAGATTATCA+AGG 0.505513 4_1:-9846462 None:intergenic
TGGTGGCTTTATTGGATCCA+AGG 0.512573 4_1:+9848034 Msa0534380:CDS
TCCCAATAAAGAGTTAGAAT+CGG 0.520203 4_1:+9849667 Msa0534380:CDS
AGAGACTAACTAATGCCGTT+AGG 0.528762 4_1:+9850545 Msa0534380:exon
AAATCAAAACCTCTGTTCCC+GGG 0.538102 4_1:+9847945 Msa0534380:CDS
TGAAGTTAGGTCCTCAATGG+TGG 0.544907 4_1:+9846476 Msa0534380:CDS
AAAAGAGAATAAATCATGGA+TGG 0.549712 4_1:+9846429 Msa0534380:CDS
AAAGAGTACGAAGGTGTTGG+TGG 0.557324 4_1:+9848017 Msa0534380:CDS
GACTTATTAAAAGGGATAGA+GGG 0.558296 4_1:+9850913 Msa0534380:three_prime_UTR
TCATGAAGTTAGGTCCTCAA+TGG 0.559956 4_1:+9846473 Msa0534380:CDS
TCCGAATATGGTAAAATGCA+CGG 0.561454 4_1:-9850481 None:intergenic
TTGTCGATTCAAAGCCCAAA+AGG 0.562583 4_1:+9849705 Msa0534380:CDS
AGAGATGGTAGATAGAAGCG+TGG 0.569313 4_1:-9846241 None:intergenic
GAAAGGCTGTCGTAAACTCT+GGG 0.569575 4_1:+9849642 Msa0534380:CDS
AGCAATCTTCAAACAGGCAA+AGG 0.575995 4_1:+9849571 Msa0534380:CDS
ATAAAAGAGTACGAAGGTGT+TGG 0.595752 4_1:+9848014 Msa0534380:CDS
TAAACCAAGGCCAGTAGCTG+AGG 0.602508 4_1:+9849538 Msa0534380:CDS
AATCTTCAAACAGGCAAAGG+TGG 0.603658 4_1:+9849574 Msa0534380:CDS
GAAGTTAGGTCCTCAATGGT+GGG 0.620845 4_1:+9846477 Msa0534380:CDS
GAGCAACACAACAAACTGGA+AGG 0.621563 4_1:+9846372 Msa0534380:CDS
GAGGTGGCGGAGATTGAGAG+AGG 0.622568 4_1:-9846277 None:intergenic
AAATGGACTTCATCGACAAG+TGG 0.623224 4_1:-9850625 None:intergenic
ATAGAAGTAGAAGATGAAAG+GGG 0.623899 4_1:+9846189 Msa0534380:exon
AAAATACAACCCGGGAACAG+AGG 0.632675 4_1:-9847954 None:intergenic
AGGTGGCGGAGATTGAGAGA+GGG 0.633952 4_1:-9846276 None:intergenic
AAAGGCAGATTAATAAACCA+AGG 0.636259 4_1:+9849525 Msa0534380:CDS
GATGGTAGATAGAAGCGTGG+TGG 0.640718 4_1:-9846238 None:intergenic
AGCGTGGTGGTGGATTCCAT+AGG 0.665297 4_1:-9846225 None:intergenic
ACACGAACAACCCACCATTG+AGG 0.668787 4_1:-9846487 None:intergenic
AGGAAAAGGAGAGAACCTAA+CGG 0.732678 4_1:-9850560 None:intergenic
GACTACATAAAAGAGTACGA+AGG 0.746036 4_1:+9848008 Msa0534380:CDS
GAATATGGTAAAATGCACGG+TGG 0.797672 4_1:-9850478 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTATTATTATTT+TGG - chr4_1:9846121-9846140 None:intergenic 0.0%
!! GAAATAAAAAAAAATGAATT+AGG + chr4_1:9847002-9847021 Msa0534380:intron 10.0%
!!! ATATAAAGTCTTATAAAATA+AGG - chr4_1:9849364-9849383 None:intergenic 10.0%
!!! TATTTTATAAGACTTTATAT+TGG + chr4_1:9849364-9849383 Msa0534380:intron 10.0%
!! AAACAAATACATAAACTAAA+CGG - chr4_1:9846896-9846915 None:intergenic 15.0%
!!! TTTTAAACCAAAAAAAGATA+GGG - chr4_1:9847725-9847744 None:intergenic 15.0%
!!! TAAAAGTGACATATTTTTAT+TGG + chr4_1:9849105-9849124 Msa0534380:intron 15.0%
!! ATGCTTGTAATTATTAATTT+CGG + chr4_1:9849411-9849430 Msa0534380:intron 15.0%
!!! TTTAGCTTTTCTTTAAAAAA+TGG - chr4_1:9850645-9850664 None:intergenic 15.0%
!!! TTGTGTTTTTGTGTTTTTTA+AGG + chr4_1:9846591-9846610 Msa0534380:intron 20.0%
!! TAGTTTATGTATTTGTTTGA+AGG + chr4_1:9846898-9846917 Msa0534380:intron 20.0%
!! AATATAATCGCTTGAATAAT+AGG + chr4_1:9847235-9847254 Msa0534380:intron 20.0%
!!! CATTTTAAAGTTCAAATTGA+CGG - chr4_1:9847377-9847396 None:intergenic 20.0%
!!! GATTGAAAATTTTCAATTCT+AGG + chr4_1:9847498-9847517 Msa0534380:intron 20.0%
!!! TATTTTACCCTATCTTTTTT+TGG + chr4_1:9847715-9847734 Msa0534380:intron 20.0%
!!! GTTTTAAACCAAAAAAAGAT+AGG - chr4_1:9847726-9847745 None:intergenic 20.0%
!! AACAATTAAGAAATGTTGTT+TGG + chr4_1:9847827-9847846 Msa0534380:intron 20.0%
!!! TTTAATGCATTGCTAATTTT+TGG + chr4_1:9848087-9848106 Msa0534380:intron 20.0%
!! TTGTGAATAGTTTCAAAATT+CGG + chr4_1:9848201-9848220 Msa0534380:intron 20.0%
!! ACTTCTTATTATGAATGAAT+AGG - chr4_1:9848439-9848458 None:intergenic 20.0%
!! AAAAGATTTCAGAGAAAATA+GGG - chr4_1:9848545-9848564 None:intergenic 20.0%
!! AAAAAGATTTCAGAGAAAAT+AGG - chr4_1:9848546-9848565 None:intergenic 20.0%
!!! TTTTCTCTGAAATCTTTTTA+TGG + chr4_1:9848547-9848566 Msa0534380:intron 20.0%
!! AAGATAAATATTCAACTTCT+TGG - chr4_1:9848608-9848627 None:intergenic 20.0%
!! GTTGAATATTTATCTTTGAT+TGG + chr4_1:9848612-9848631 Msa0534380:intron 20.0%
!!! TTTTTACGATATACTTCATA+TGG + chr4_1:9848767-9848786 Msa0534380:intron 20.0%
!! TATCAAATGACAAAAGAAAA+GGG - chr4_1:9849000-9849019 None:intergenic 20.0%
!! ATATCAAATGACAAAAGAAA+AGG - chr4_1:9849001-9849020 None:intergenic 20.0%
!!! TTGAATCTTGAATTATTTTG+AGG + chr4_1:9849026-9849045 Msa0534380:intron 20.0%
!! AAAGTATACGTTATATTGAA+CGG + chr4_1:9849249-9849268 Msa0534380:intron 20.0%
!! TTATAAGACTTTATATTGGA+TGG + chr4_1:9849368-9849387 Msa0534380:intron 20.0%
!!! ATTATATCTGGATCATTTTT+AGG + chr4_1:9849821-9849840 Msa0534380:intron 20.0%
!!! TTATATCTGGATCATTTTTA+GGG + chr4_1:9849822-9849841 Msa0534380:intron 20.0%
!! ATTTCAATTAATTCTAGTGA+AGG - chr4_1:9849901-9849920 None:intergenic 20.0%
!! TAAAATAATGTGTGATTTGA+TGG + chr4_1:9850175-9850194 Msa0534380:intron 20.0%
!! AAAATAATGTGTGATTTGAT+GGG + chr4_1:9850176-9850195 Msa0534380:intron 20.0%
!! ATAATATACAAGTATGCATT+GGG - chr4_1:9850678-9850697 None:intergenic 20.0%
!! TATAATATACAAGTATGCAT+TGG - chr4_1:9850679-9850698 None:intergenic 20.0%
!! TTAATAAGTCAGATGAATAT+TGG - chr4_1:9850903-9850922 None:intergenic 20.0%
!! TATTCATCTGACTTATTAAA+AGG + chr4_1:9850904-9850923 Msa0534380:three_prime_UTR 20.0%
!! ATTCATCTGACTTATTAAAA+GGG + chr4_1:9850905-9850924 Msa0534380:three_prime_UTR 20.0%
! AATAATAAATCACCAGAGAT+TGG + chr4_1:9846134-9846153 Msa0534380:five_prime_UTR 25.0%
!!! CCATGATTTATTCTCTTTTT+TGG - chr4_1:9846428-9846447 None:intergenic 25.0%
! CCAAAAAAGAGAATAAATCA+TGG + chr4_1:9846425-9846444 Msa0534380:CDS 25.0%
! AAAAGAGAATAAATCATGGA+TGG + chr4_1:9846429-9846448 Msa0534380:CDS 25.0%
!!! TTGTGTTGTTCATTTTGTTA+TGG + chr4_1:9846649-9846668 Msa0534380:intron 25.0%
! GTTATGGATAAGAATAGAAA+TGG + chr4_1:9846665-9846684 Msa0534380:intron 25.0%
!! TCGAAATGATTTGTCTTTAA+CGG + chr4_1:9846823-9846842 Msa0534380:intron 25.0%
!! CGTCAATTTGAACTTTAAAA+TGG + chr4_1:9847375-9847394 Msa0534380:intron 25.0%
!! TTCGATCATATTGATCATTT+TGG + chr4_1:9847433-9847452 Msa0534380:intron 25.0%
!! TAGTCTTAAATTAGTTCAGA+TGG + chr4_1:9847467-9847486 Msa0534380:intron 25.0%
! TTGCTTGATCATTAATTTCA+TGG + chr4_1:9847556-9847575 Msa0534380:intron 25.0%
!! TCTTTTATGTAGTCATGTAA+TGG - chr4_1:9848002-9848021 None:intergenic 25.0%
!!! ACAATTCATTGTTTTGTTAG+AGG - chr4_1:9848185-9848204 None:intergenic 25.0%
! CAAGTTCTCAAATCAAATAA+TGG - chr4_1:9848471-9848490 None:intergenic 25.0%
!!! TCTGAAATCTTTTTATGGAT+TGG + chr4_1:9848552-9848571 Msa0534380:intron 25.0%
!!! AAATCTTTTTATGGATTGGT+TGG + chr4_1:9848556-9848575 Msa0534380:intron 25.0%
!!! AATCTTTTTATGGATTGGTT+GGG + chr4_1:9848557-9848576 Msa0534380:intron 25.0%
! TAATCTATCAGATAAACCAA+GGG - chr4_1:9848728-9848747 None:intergenic 25.0%
! TTAATCTATCAGATAAACCA+AGG - chr4_1:9848729-9848748 None:intergenic 25.0%
! ATCTCTTGTATGTATCTATT+TGG + chr4_1:9848859-9848878 Msa0534380:intron 25.0%
! ATACAAAGTTGACAAAATAG+TGG - chr4_1:9848970-9848989 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+GGG - chr4_1:9848999-9849018 None:intergenic 25.0%
! CTTTATAGAAGTAGATCATT+CGG - chr4_1:9849233-9849252 None:intergenic 25.0%
!!! TATTGGATGGTGTTTTTTTT+TGG + chr4_1:9849381-9849400 Msa0534380:intron 25.0%
! CAAATGATAAAACAATTGAG+AGG - chr4_1:9849500-9849519 None:intergenic 25.0%
!! GTTTTATCATTTGCAGAAAA+AGG + chr4_1:9849507-9849526 Msa0534380:intron 25.0%
! AATATCACAAAGTGATATCA+TGG - chr4_1:9849988-9850007 None:intergenic 25.0%
!! GATGTTTATGCAGATATTTT+AGG - chr4_1:9850015-9850034 None:intergenic 25.0%
! TCTTTGTAGTTAGATTTGAT+TGG + chr4_1:9850033-9850052 Msa0534380:intron 25.0%
! ATCTGATGTGTATCTAAATT+GGG - chr4_1:9850311-9850330 None:intergenic 25.0%
!! TCTAAGTTTTACTTAGGAAA+AGG - chr4_1:9850577-9850596 None:intergenic 25.0%
AGATTGGTATGTTTGGAAAT+TGG + chr4_1:9846150-9846169 Msa0534380:five_prime_UTR 30.0%
ATGTTTGGAAATTGGAACTT+TGG + chr4_1:9846158-9846177 Msa0534380:five_prime_UTR 30.0%
AGATAGAAGTAGAAGATGAA+AGG + chr4_1:9846187-9846206 Msa0534380:exon 30.0%
GATAGAAGTAGAAGATGAAA+GGG + chr4_1:9846188-9846207 Msa0534380:exon 30.0%
ATAGAAGTAGAAGATGAAAG+GGG + chr4_1:9846189-9846208 Msa0534380:exon 30.0%
CTAACTTCATGAGATTATCA+AGG - chr4_1:9846465-9846484 None:intergenic 30.0%
! CTTGATAATCTCATGAAGTT+AGG + chr4_1:9846463-9846482 Msa0534380:CDS 30.0%
!!! TTTTCCTGATATCGACTTTA+AGG + chr4_1:9846567-9846586 Msa0534380:CDS 30.0%
!!! GTAGTTTTTTCTTAACCATC+CGG + chr4_1:9846703-9846722 Msa0534380:intron 30.0%
! GGCTAATGATTATTCTAGTT+AGG + chr4_1:9846784-9846803 Msa0534380:intron 30.0%
! TTCTAGTTAGGAATAGAACT+TGG + chr4_1:9846796-9846815 Msa0534380:intron 30.0%
ACTATTTGAGCTCAAATACT+TGG + chr4_1:9846855-9846874 Msa0534380:intron 30.0%
TATTTGTTTGAAGGAGACTT+TGG + chr4_1:9846907-9846926 Msa0534380:intron 30.0%
GAGTTGAATGTGAATCATTT+AGG + chr4_1:9847030-9847049 Msa0534380:intron 30.0%
TTGAATGTGAATCATTTAGG+AGG + chr4_1:9847033-9847052 Msa0534380:intron 30.0%
GAGTTGAATGTGAATCATTT+AGG + chr4_1:9847030-9847049 Msa0534380:intron 30.0%
TTGAATGTGAATCATTTAGG+AGG + chr4_1:9847033-9847052 Msa0534380:intron 30.0%
AGTTGAATGTGAATCATTGT+TGG + chr4_1:9847087-9847106 Msa0534380:intron 30.0%
GTTGAATGTGAATCATTGTT+GGG + chr4_1:9847088-9847107 Msa0534380:intron 30.0%
TGGGTATAACTCATAGTTTA+CGG + chr4_1:9847112-9847131 Msa0534380:intron 30.0%
GCTTGAATAATAGGCATAAT+TGG + chr4_1:9847244-9847263 Msa0534380:intron 30.0%
! TATCTGTTTTCTTTTGAACC+AGG + chr4_1:9847314-9847333 Msa0534380:intron 30.0%
! TCATTAATTTCATGGACTGA+AGG + chr4_1:9847564-9847583 Msa0534380:intron 30.0%
GTTGTTTATTTATTGATCCG+TGG + chr4_1:9847849-9847868 Msa0534380:intron 30.0%
! TCTTCAATCTCTTTTTCTCA+TGG - chr4_1:9847908-9847927 None:intergenic 30.0%
!!! AGGTTTTGATTTTACAGAGA+TGG - chr4_1:9847937-9847956 None:intergenic 30.0%
! ACATATTTGAAGTTGTGTCT+AGG + chr4_1:9848226-9848245 Msa0534380:intron 30.0%
ATTATTATCAGTGTTTGCGT+AGG - chr4_1:9848284-9848303 None:intergenic 30.0%
!! TGATTCAAGTTTTGTCTTCT+AGG + chr4_1:9848510-9848529 Msa0534380:intron 30.0%
! CTTGGTTTATGTATTTTGCT+TGG - chr4_1:9848590-9848609 None:intergenic 30.0%
TTAAACTGAATCCAATCGAT+AGG + chr4_1:9848835-9848854 Msa0534380:intron 30.0%
CGATTCACGATTCAAAAAAT+AGG + chr4_1:9849157-9849176 Msa0534380:intron 30.0%
TGATTATAGTTCATACTGAG+TGG + chr4_1:9849283-9849302 Msa0534380:intron 30.0%
ACATTGAGACATTAGACAAA+AGG - chr4_1:9849448-9849467 None:intergenic 30.0%
AAAGGCAGATTAATAAACCA+AGG + chr4_1:9849525-9849544 Msa0534380:CDS 30.0%
TCCCAATAAAGAGTTAGAAT+CGG + chr4_1:9849667-9849686 Msa0534380:CDS 30.0%
TCCGATTCTAACTCTTTATT+GGG - chr4_1:9849671-9849690 None:intergenic 30.0%
ATCCGATTCTAACTCTTTAT+TGG - chr4_1:9849672-9849691 None:intergenic 30.0%
AAAAAACCTAAACTTGTCAC+AGG + chr4_1:9849785-9849804 Msa0534380:intron 30.0%
TGATCCAGATATAATTCGAA+CGG - chr4_1:9849816-9849835 None:intergenic 30.0%
TCAATTAATTCTAGTGAAGG+AGG - chr4_1:9849898-9849917 None:intergenic 30.0%
ATATCATGGTGAAATCTGAT+TGG - chr4_1:9849974-9849993 None:intergenic 30.0%
TGTCTATGTGAAACTTAAAC+TGG + chr4_1:9850141-9850160 Msa0534380:intron 30.0%
GATCTGATGTGTATCTAAAT+TGG - chr4_1:9850312-9850331 None:intergenic 30.0%
AGATACACATCAGATCAAAT+AGG + chr4_1:9850316-9850335 Msa0534380:intron 30.0%
! TTTTACCATATTCGGAAAAG+AGG + chr4_1:9850488-9850507 Msa0534380:CDS 30.0%
GAACAATTTCACTAACATCT+AGG - chr4_1:9850524-9850543 None:intergenic 30.0%
TATTATTGTGAGACATGTAC+TGG + chr4_1:9850697-9850716 Msa0534380:intron 30.0%
TTACTGAGCCTAAAATTTGA+AGG + chr4_1:9850749-9850768 Msa0534380:intron 30.0%
TACTGAGCCTAAAATTTGAA+GGG + chr4_1:9850750-9850769 Msa0534380:intron 30.0%
! ACAAATCCCCTTCAAATTTT+AGG - chr4_1:9850760-9850779 None:intergenic 30.0%
AACAGTTGCAACAAAAAATG+TGG + chr4_1:9850814-9850833 Msa0534380:intron 30.0%
TGACTTATTAAAAGGGATAG+AGG + chr4_1:9850912-9850931 Msa0534380:three_prime_UTR 30.0%
TTTCCAAACATACCAATCTC+TGG - chr4_1:9846149-9846168 None:intergenic 35.0%
!! TTCTTTTGCTGTGAGGATTT+CGG - chr4_1:9846323-9846342 None:intergenic 35.0%
CAAACCTTAAAGTCGATATC+AGG - chr4_1:9846574-9846593 None:intergenic 35.0%
!!! AGGTTGCTGTTTTTGCTTTA+TGG + chr4_1:9846611-9846630 Msa0534380:intron 35.0%
GGAAAAAAGTCTTGGGAATA+CGG + chr4_1:9846734-9846753 Msa0534380:intron 35.0%
AAGGAGACTTTGGATTTATG+TGG + chr4_1:9846917-9846936 Msa0534380:intron 35.0%
AGACTTTGGATTTATGTGGA+TGG + chr4_1:9846921-9846940 Msa0534380:intron 35.0%
TTTGGATTTATGTGGATGGA+GGG + chr4_1:9846925-9846944 Msa0534380:intron 35.0%
AATGTGAATCATTGTTGGGT+TGG + chr4_1:9847092-9847111 Msa0534380:intron 35.0%
ATGTGAATCATTGTTGGGTT+GGG + chr4_1:9847093-9847112 Msa0534380:intron 35.0%
ACTCATAGTTTACGGATAAG+TGG + chr4_1:9847120-9847139 Msa0534380:intron 35.0%
GAATAATAGGCATAATTGGC+CGG + chr4_1:9847248-9847267 Msa0534380:intron 35.0%
AAATCAGACAAAGAATGCAC+AGG - chr4_1:9847289-9847308 None:intergenic 35.0%
CTCCATCCAAACATATTGAT+TGG + chr4_1:9847747-9847766 Msa0534380:intron 35.0%
CTCCAATCAATATGTTTGGA+TGG - chr4_1:9847752-9847771 None:intergenic 35.0%
CAAGCTCCAATCAATATGTT+TGG - chr4_1:9847756-9847775 None:intergenic 35.0%
! TATTGATCCGTGGTAATGTT+TGG + chr4_1:9847859-9847878 Msa0534380:intron 35.0%
CCTAAAACCAAACATTACCA+CGG - chr4_1:9847869-9847888 None:intergenic 35.0%
GAGAAAAAGAGATTGAAGAG+TGG + chr4_1:9847909-9847928 Msa0534380:CDS 35.0%
AAAATCAAAACCTCTGTTCC+CGG + chr4_1:9847944-9847963 Msa0534380:CDS 35.0%
ATCTCAGAAAAATACAACCC+GGG - chr4_1:9847965-9847984 None:intergenic 35.0%
CATCTCAGAAAAATACAACC+CGG - chr4_1:9847966-9847985 None:intergenic 35.0%
! GACTACATAAAAGAGTACGA+AGG + chr4_1:9848008-9848027 Msa0534380:CDS 35.0%
! ATAAAAGAGTACGAAGGTGT+TGG + chr4_1:9848014-9848033 Msa0534380:CDS 35.0%
! TATTTGAAGTTGTGTCTAGG+AGG + chr4_1:9848229-9848248 Msa0534380:intron 35.0%
ACACCTTTAATCGTAAGTGT+TGG + chr4_1:9848378-9848397 Msa0534380:intron 35.0%
ATAAACCAAGGGAAACAAGA+AGG - chr4_1:9848717-9848736 None:intergenic 35.0%
ACATCAAATAGAGACACGAT+TGG - chr4_1:9848816-9848835 None:intergenic 35.0%
TACAAGAGATTCCTATCGAT+TGG - chr4_1:9848849-9848868 None:intergenic 35.0%
AGGATTCATCATAGTGAATC+AGG - chr4_1:9848905-9848924 None:intergenic 35.0%
GTGATTCGATTGAATGAATC+AGG - chr4_1:9848925-9848944 None:intergenic 35.0%
AATGACAAAAGAAAAGGGGT+TGG - chr4_1:9848995-9849014 None:intergenic 35.0%
! TCATTCGGTACAAAGTATCA+TGG - chr4_1:9849218-9849237 None:intergenic 35.0%
ACAATTGAGAGGTTCAACTT+AGG - chr4_1:9849489-9849508 None:intergenic 35.0%
TATGGAAGCAATCTTCAAAC+AGG + chr4_1:9849565-9849584 Msa0534380:CDS 35.0%
AGAAGAAGAAGAAGAGAGAA+AGG + chr4_1:9849625-9849644 Msa0534380:CDS 35.0%
!!! GTTTTTCTAGAGCTCCTTTT+GGG - chr4_1:9849722-9849741 None:intergenic 35.0%
! TGATTTGATGGGTCAATGAT+AGG + chr4_1:9850187-9850206 Msa0534380:intron 35.0%
GAATGACATCAATCACTCAT+GGG - chr4_1:9850289-9850308 None:intergenic 35.0%
TCATTTAACCGTCTTTATGC+AGG + chr4_1:9850455-9850474 Msa0534380:intron 35.0%
! ACCGTGCATTTTACCATATT+CGG + chr4_1:9850480-9850499 Msa0534380:CDS 35.0%
TCCGAATATGGTAAAATGCA+CGG - chr4_1:9850484-9850503 None:intergenic 35.0%
! TATGTCCTCTTTTCCGAATA+TGG - chr4_1:9850496-9850515 None:intergenic 35.0%
! TCTGCGTCTAAGTTTTACTT+AGG - chr4_1:9850583-9850602 None:intergenic 35.0%
ACTGAGCCTAAAATTTGAAG+GGG + chr4_1:9850751-9850770 Msa0534380:intron 35.0%
AAAATGTGGCTGCAATGTTA+AGG + chr4_1:9850828-9850847 Msa0534380:three_prime_UTR 35.0%
GATACAAGTGATACAATTGC+AGG - chr4_1:9850866-9850885 None:intergenic 35.0%
TCACCAGAGATTGGTATGTT+TGG + chr4_1:9846143-9846162 Msa0534380:five_prime_UTR 40.0%
!! TCTTTTGCTGTGAGGATTTC+GGG - chr4_1:9846322-9846341 None:intergenic 40.0%
TCATGAAGTTAGGTCCTCAA+TGG + chr4_1:9846473-9846492 Msa0534380:CDS 40.0%
TGTTCGTGTTTCTCGTGTTA+AGG + chr4_1:9846501-9846520 Msa0534380:CDS 40.0%
GTTCGTGTTTCTCGTGTTAA+GGG + chr4_1:9846502-9846521 Msa0534380:CDS 40.0%
! TTCTGAGGGGAAAAAAGTCT+TGG + chr4_1:9846726-9846745 Msa0534380:intron 40.0%
TCTGAGGGGAAAAAAGTCTT+GGG + chr4_1:9846727-9846746 Msa0534380:intron 40.0%
! TTGGGAATACGGTGTTTTGT+CGG + chr4_1:9846745-9846764 Msa0534380:intron 40.0%
GTCGGAAGTTAAGTAAAGTC+TGG + chr4_1:9846763-9846782 Msa0534380:intron 40.0%
CTTTGGATTTATGTGGATGG+AGG + chr4_1:9846924-9846943 Msa0534380:intron 40.0%
CAGGATTTCATCACAGAATC+CGG - chr4_1:9847270-9847289 None:intergenic 40.0%
AACTGTTAGAACATACAGCC+TGG - chr4_1:9847335-9847354 None:intergenic 40.0%
! TCAAATTGACGGATGCGTAA+AGG - chr4_1:9847366-9847385 None:intergenic 40.0%
GAAAATGAACCGTCACAGTT+TGG - chr4_1:9847638-9847657 None:intergenic 40.0%
! TCATTTTCCCTAGATGTTGC+AGG + chr4_1:9847650-9847669 Msa0534380:intron 40.0%
! CATTTTCCCTAGATGTTGCA+GGG + chr4_1:9847651-9847670 Msa0534380:intron 40.0%
CTATAACCCTGCAACATCTA+GGG - chr4_1:9847660-9847679 None:intergenic 40.0%
TCTATAACCCTGCAACATCT+AGG - chr4_1:9847661-9847680 None:intergenic 40.0%
!!! CCGTGGTAATGTTTGGTTTT+AGG + chr4_1:9847866-9847885 Msa0534380:intron 40.0%
! CTCTTTTTCTCATGGATAGC+TGG - chr4_1:9847900-9847919 None:intergenic 40.0%
AAATCAAAACCTCTGTTCCC+GGG + chr4_1:9847945-9847964 Msa0534380:CDS 40.0%
TGCTTACGTATTTCCAACCT+TGG - chr4_1:9848054-9848073 None:intergenic 40.0%
GTTAGAGGACTTGATGAACA+TGG - chr4_1:9848170-9848189 None:intergenic 40.0%
TGTCTGACTCTGACATGTAT+CGG + chr4_1:9848346-9848365 Msa0534380:intron 40.0%
GCACCAACACTTACGATTAA+AGG - chr4_1:9848384-9848403 None:intergenic 40.0%
!! AAGTGTTGGTGCTATATAGC+TGG + chr4_1:9848392-9848411 Msa0534380:intron 40.0%
!! GTTTTCCTTCTTGTTTCCCT+TGG + chr4_1:9848709-9848728 Msa0534380:intron 40.0%
AGTGAATCAGGATTCGAGAT+GGG - chr4_1:9848893-9848912 None:intergenic 40.0%
TAGTGAATCAGGATTCGAGA+TGG - chr4_1:9848894-9848913 None:intergenic 40.0%
TGGCTGACTACACTAAGTTT+AGG - chr4_1:9848950-9848969 None:intergenic 40.0%
AGGTTCAACTTAGGCTTAAC+AGG - chr4_1:9849480-9849499 None:intergenic 40.0%
AGCAATCTTCAAACAGGCAA+AGG + chr4_1:9849571-9849590 Msa0534380:CDS 40.0%
AATCTTCAAACAGGCAAAGG+TGG + chr4_1:9849574-9849593 Msa0534380:CDS 40.0%
!! TTGTCGATTCAAAGCCCAAA+AGG + chr4_1:9849705-9849724 Msa0534380:CDS 40.0%
!!! GGTTTTTCTAGAGCTCCTTT+TGG - chr4_1:9849723-9849742 None:intergenic 40.0%
TGTGACTGTTAGTTGGTTAG+AGG - chr4_1:9849744-9849763 None:intergenic 40.0%
CTTCTTCTGTGACTGTTAGT+TGG - chr4_1:9849751-9849770 None:intergenic 40.0%
TCTGCCGTTCGAATTATATC+TGG + chr4_1:9849809-9849828 Msa0534380:intron 40.0%
!!! GGATCATTTTTAGGGTTTGC+AGG + chr4_1:9849830-9849849 Msa0534380:intron 40.0%
!!! AGCTCACCATTTTGGTTTTG+CGG - chr4_1:9849874-9849893 None:intergenic 40.0%
AATGACGAGTGCACTCAAAT+CGG + chr4_1:9850249-9850268 Msa0534380:intron 40.0%
GGAATGACATCAATCACTCA+TGG - chr4_1:9850290-9850309 None:intergenic 40.0%
ATCAGATCAAATAGGCTGCT+CGG + chr4_1:9850324-9850343 Msa0534380:intron 40.0%
TTGTGCAGTGCAATTAGACT+CGG - chr4_1:9850393-9850412 None:intergenic 40.0%
GAATATGGTAAAATGCACGG+TGG - chr4_1:9850481-9850500 None:intergenic 40.0%
! TAACGGCATTAGTTAGTCTC+TGG - chr4_1:9850546-9850565 None:intergenic 40.0%
AGAGACTAACTAATGCCGTT+AGG + chr4_1:9850545-9850564 Msa0534380:exon 40.0%
AGGAAAAGGAGAGAACCTAA+CGG - chr4_1:9850563-9850582 None:intergenic 40.0%
! AAATGGACTTCATCGACAAG+TGG - chr4_1:9850628-9850647 None:intergenic 40.0%
AGAGATGGTAGATAGAAGCG+TGG - chr4_1:9846244-9846263 None:intergenic 45.0%
!! TTTTGCTGTGAGGATTTCGG+GGG - chr4_1:9846320-9846339 None:intergenic 45.0%
!! CTTTTGCTGTGAGGATTTCG+GGG - chr4_1:9846321-9846340 None:intergenic 45.0%
GAGAGAGCAACACAACAAAC+TGG + chr4_1:9846368-9846387 Msa0534380:CDS 45.0%
GAGCAACACAACAAACTGGA+AGG + chr4_1:9846372-9846391 Msa0534380:CDS 45.0%
TGAAGTTAGGTCCTCAATGG+TGG + chr4_1:9846476-9846495 Msa0534380:CDS 45.0%
GAAGTTAGGTCCTCAATGGT+GGG + chr4_1:9846477-9846496 Msa0534380:CDS 45.0%
TGAAGCTCTTGCTCGTTCTT+TGG + chr4_1:9846537-9846556 Msa0534380:CDS 45.0%
TTCTTAACCATCCGGTTCTG+AGG + chr4_1:9846711-9846730 Msa0534380:intron 45.0%
! TCTTAACCATCCGGTTCTGA+GGG + chr4_1:9846712-9846731 Msa0534380:intron 45.0%
!!! GACTTTTTTCCCCTCAGAAC+CGG - chr4_1:9846725-9846744 None:intergenic 45.0%
TTTATGTGGATGGAGGGCTT+TGG + chr4_1:9846931-9846950 Msa0534380:intron 45.0%
TAAGTGGCCATGTCGCTAAT+TGG + chr4_1:9847136-9847155 Msa0534380:intron 45.0%
AAGTGGCCATGTCGCTAATT+GGG + chr4_1:9847137-9847156 Msa0534380:intron 45.0%
ATTACCCTTGAGCCATACTG+CGG - chr4_1:9847183-9847202 None:intergenic 45.0%
AACTCCAGACCAAACTGTGA+CGG + chr4_1:9847626-9847645 Msa0534380:intron 45.0%
TCTTATCTCCTCAGCTGGTA+GGG - chr4_1:9847789-9847808 None:intergenic 45.0%
TTCTTATCTCCTCAGCTGGT+AGG - chr4_1:9847790-9847809 None:intergenic 45.0%
AAAATACAACCCGGGAACAG+AGG - chr4_1:9847957-9847976 None:intergenic 45.0%
!! AAAGAGTACGAAGGTGTTGG+TGG + chr4_1:9848017-9848036 Msa0534380:CDS 45.0%
!! GAAGGTGTTGGTGGCTTTAT+TGG + chr4_1:9848026-9848045 Msa0534380:CDS 45.0%
!! TGGTGGCTTTATTGGATCCA+AGG + chr4_1:9848034-9848053 Msa0534380:CDS 45.0%
!! GGCTTTATTGGATCCAAGGT+TGG + chr4_1:9848038-9848057 Msa0534380:CDS 45.0%
! TACATGTGTAAGTGTCGTGC+CGG + chr4_1:9848323-9848342 Msa0534380:intron 45.0%
TACATGTCAGAGTCAGACAC+CGG - chr4_1:9848345-9848364 None:intergenic 45.0%
TCCATATCATCCTCAGCTAC+TGG - chr4_1:9849551-9849570 None:intergenic 45.0%
AGAAAGGCTGTCGTAAACTC+TGG + chr4_1:9849641-9849660 Msa0534380:CDS 45.0%
GAAAGGCTGTCGTAAACTCT+GGG + chr4_1:9849642-9849661 Msa0534380:CDS 45.0%
GCAGAACCTGTGACAAGTTT+AGG - chr4_1:9849794-9849813 None:intergenic 45.0%
GCTGAACCGCAAAACCAAAA+TGG + chr4_1:9849865-9849884 Msa0534380:intron 45.0%
! AAGGAGGAAGCTCACCATTT+TGG - chr4_1:9849882-9849901 None:intergenic 45.0%
TCAATCACTCATGGGCAAAC+CGG - chr4_1:9850281-9850300 None:intergenic 45.0%
CTGATCGAGAACTGAACCTA+TGG - chr4_1:9850355-9850374 None:intergenic 45.0%
CAGTTCTCGATCAGACTTGT+CGG + chr4_1:9850361-9850380 Msa0534380:intron 45.0%
CAGTGCAATTAGACTCGGAA+AGG - chr4_1:9850388-9850407 None:intergenic 45.0%
! GATGGTAGATAGAAGCGTGG+TGG - chr4_1:9846241-9846260 None:intergenic 50.0%
GATTGAGAGAGGGAGTTTGG+TGG - chr4_1:9846269-9846288 None:intergenic 50.0%
GGAGATTGAGAGAGGGAGTT+TGG - chr4_1:9846272-9846291 None:intergenic 50.0%
!! GTCTGCGTTCTTTTGCTGTG+AGG - chr4_1:9846330-9846349 None:intergenic 50.0%
ACACGAACAACCCACCATTG+AGG - chr4_1:9846490-9846509 None:intergenic 50.0%
!! CTTAACCATCCGGTTCTGAG+GGG + chr4_1:9846713-9846732 Msa0534380:intron 50.0%
! TTTTTCCCCTCAGAACCGGA+TGG - chr4_1:9846721-9846740 None:intergenic 50.0%
AGTGGCCATGTCGCTAATTG+GGG + chr4_1:9847138-9847157 Msa0534380:intron 50.0%
TGAACCGTCACAGTTTGGTC+TGG - chr4_1:9847633-9847652 None:intergenic 50.0%
CGCTTTCTTATCTCCTCAGC+TGG - chr4_1:9847794-9847813 None:intergenic 50.0%
TAAACCAAGGCCAGTAGCTG+AGG + chr4_1:9849538-9849557 Msa0534380:CDS 50.0%
GCCAGTAGCTGAGGATGATA+TGG + chr4_1:9849547-9849566 Msa0534380:CDS 50.0%
!! GCACTCAAATCGGTTTGCAC+CGG + chr4_1:9850259-9850278 Msa0534380:intron 50.0%
ATCAAATAGGCTGCTCGGAC+CGG + chr4_1:9850329-9850348 Msa0534380:intron 50.0%
TCGAGAACTGAACCTATGGC+CGG - chr4_1:9850351-9850370 None:intergenic 50.0%
GGGTGCTTACGCTTCACCTA+TGG + chr4_1:9846209-9846228 Msa0534380:CDS 55.0%
!! AGCGTGGTGGTGGATTCCAT+AGG - chr4_1:9846228-9846247 None:intergenic 55.0%
! GGTAGATAGAAGCGTGGTGG+TGG - chr4_1:9846238-9846257 None:intergenic 55.0%
! GGGAGTTTGGTGGAGAGAGA+TGG - chr4_1:9846259-9846278 None:intergenic 55.0%
!! AGGTGGCGGAGATTGAGAGA+GGG - chr4_1:9846279-9846298 None:intergenic 55.0%
! ATGTGGATGGAGGGCTTTGG+AGG + chr4_1:9846934-9846953 Msa0534380:intron 55.0%
GTGGCCATGTCGCTAATTGG+GGG + chr4_1:9847139-9847158 Msa0534380:intron 55.0%
TGGCCATGTCGCTAATTGGG+GGG + chr4_1:9847140-9847159 Msa0534380:intron 55.0%
AGTGTCCGCAGTATGGCTCA+AGG + chr4_1:9847175-9847194 Msa0534380:intron 55.0%
GTGTCCGCAGTATGGCTCAA+GGG + chr4_1:9847176-9847195 Msa0534380:intron 55.0%
GCTAACAACCCTACCAGCTG+AGG + chr4_1:9847778-9847797 Msa0534380:intron 55.0%
! TCATCCTCAGCTACTGGCCT+TGG - chr4_1:9849545-9849564 None:intergenic 55.0%
CACGGTGGCCTGCATAAAGA+CGG - chr4_1:9850466-9850485 None:intergenic 55.0%
!! GAGGTGGCGGAGATTGAGAG+AGG - chr4_1:9846280-9846299 None:intergenic 60.0%
TGTGAGGATTTCGGGGGAGG+AGG - chr4_1:9846314-9846333 None:intergenic 60.0%
TGCTGTGAGGATTTCGGGGG+AGG - chr4_1:9846317-9846336 None:intergenic 60.0%
!! ATGGAGGGCTTTGGAGGCAG+AGG + chr4_1:9846940-9846959 Msa0534380:intron 60.0%
!! TGGAGGGCTTTGGAGGCAGA+GGG + chr4_1:9846941-9846960 Msa0534380:intron 60.0%
GCTCCCCCCAATTAGCGACA+TGG - chr4_1:9847146-9847165 None:intergenic 60.0%
TCGCTAATTGGGGGGAGCGA+GGG + chr4_1:9847148-9847167 Msa0534380:intron 60.0%
GATTTCGGGGGAGGAGGTGG+AGG - chr4_1:9846308-9846327 None:intergenic 65.0%
GAGGATTTCGGGGGAGGAGG+TGG - chr4_1:9846311-9846330 None:intergenic 65.0%
GTCGCTAATTGGGGGGAGCG+AGG + chr4_1:9847147-9847166 Msa0534380:intron 65.0%
CGCTAATTGGGGGGAGCGAG+GGG + chr4_1:9847149-9847168 Msa0534380:intron 65.0%
GCTAATTGGGGGGAGCGAGG+GGG + chr4_1:9847150-9847169 Msa0534380:intron 65.0%
CTAATTGGGGGGAGCGAGGG+GGG + chr4_1:9847151-9847170 Msa0534380:intron 65.0%
!! GGGGGGAAGTGTCCGCAGTA+TGG + chr4_1:9847168-9847187 Msa0534380:intron 65.0%
!! GGTGGAGGTGACGGAGGTGG+CGG - chr4_1:9846293-9846312 None:intergenic 70.0%
!! GGAGGTGGAGGTGACGGAGG+TGG - chr4_1:9846296-9846315 None:intergenic 70.0%
! GGAGGAGGTGGAGGTGACGG+AGG - chr4_1:9846299-9846318 None:intergenic 70.0%
GGGGGAGGAGGTGGAGGTGA+CGG - chr4_1:9846302-9846321 None:intergenic 70.0%
AGGCTGCTCGGACCGGCCAT+AGG + chr4_1:9850336-9850355 Msa0534380:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 9846102 9850935 9846102 ID=Msa0534380;Name=Msa0534380
chr4_1 mRNA 9846102 9850935 9846102 ID=Msa0534380-mRNA-1;Parent=Msa0534380;Name=Msa0534380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=100|0.75|0.8|1|0.5|0.4|5|219|307
chr4_1 exon 9846102 9846588 9846102 ID=Msa0534380-mRNA-1:exon:3176;Parent=Msa0534380-mRNA-1
chr4_1 exon 9847888 9848066 9847888 ID=Msa0534380-mRNA-1:exon:3177;Parent=Msa0534380-mRNA-1
chr4_1 exon 9849523 9849799 9849523 ID=Msa0534380-mRNA-1:exon:3178;Parent=Msa0534380-mRNA-1
chr4_1 exon 9850477 9850659 9850477 ID=Msa0534380-mRNA-1:exon:3179;Parent=Msa0534380-mRNA-1
chr4_1 exon 9850819 9850935 9850819 ID=Msa0534380-mRNA-1:exon:3180;Parent=Msa0534380-mRNA-1
chr4_1 five_prime_UTR 9846102 9846201 9846102 ID=Msa0534380-mRNA-1:five_prime_utr;Parent=Msa0534380-mRNA-1
chr4_1 CDS 9846202 9846588 9846202 ID=Msa0534380-mRNA-1:cds;Parent=Msa0534380-mRNA-1
chr4_1 CDS 9847888 9848066 9847888 ID=Msa0534380-mRNA-1:cds;Parent=Msa0534380-mRNA-1
chr4_1 CDS 9849523 9849799 9849523 ID=Msa0534380-mRNA-1:cds;Parent=Msa0534380-mRNA-1
chr4_1 CDS 9850477 9850557 9850477 ID=Msa0534380-mRNA-1:cds;Parent=Msa0534380-mRNA-1
chr4_1 three_prime_UTR 9850558 9850659 9850558 ID=Msa0534380-mRNA-1:three_prime_utr;Parent=Msa0534380-mRNA-1
chr4_1 three_prime_UTR 9850819 9850935 9850819 ID=Msa0534380-mRNA-1:three_prime_utr;Parent=Msa0534380-mRNA-1
Gene Sequence

>Msa0534380

ATGAAAGGGGTGCTTACGCTTCACCTATGGAATCCACCACCACGCTTCTATCTACCATCTCTCTCCACCAAACTCCCTCTCTCAATCTCCGCCACCTCCGTCACCTCCACCTCCTCCCCCGAAATCCTCACAGCAAAAGAACGCAGACGCTTACGCAACGAGCGAAGAGAGAGCAACACAACAAACTGGAAGGAAGAAGTTGAAAATAAACTCATTCAGAAAACCAAAAAAGAGAATAAATCATGGATGGATGAACTTAACCTTGATAATCTCATGAAGTTAGGTCCTCAATGGTGGGTTGTTCGTGTTTCTCGTGTTAAGGGTCAGTATACTGCTGAAGCTCTTGCTCGTTCTTTGGCTAAGTTTTTTCCTGATATCGACTTTAAGGTATATGCTCCAGCTATCCATGAGAAAAAGAGATTGAAGAGTGGTTCCATCTCTGTAAAATCAAAACCTCTGTTCCCGGGTTGTATTTTTCTGAGATGCGAACTGAACAAACCATTACATGACTACATAAAAGAGTACGAAGGTGTTGGTGGCTTTATTGGATCCAAGGTTGGAAATACAAAAAGGCAGATTAATAAACCAAGGCCAGTAGCTGAGGATGATATGGAAGCAATCTTCAAACAGGCAAAGGTGGAGCAAGAAAATGCTGACAAAGCATTTGAAGAAGAAGAAGAAGAGAGAAAGGCTGTCGTAAACTCTGGGAATCCCAATAAAGAGTTAGAATCGGATGTTTCGAAAGCTATTGTCGATTCAAAGCCCAAAAGGAGCTCTAGAAAAACCTCTAACCAACTAACAGTCACAGAAGAAGCTTCATCAGCTAAAAAAAAACCTAAACTTGCCACCGTGCATTTTACCATATTCGGAAAAGAGGACATAGTAGACCTAGATGTTAGTGAAATTGTTCCAGAGACTAACTAA

Protein sequence

>Msa0534380

MKGVLTLHLWNPPPRFYLPSLSTKLPLSISATSVTSTSSPEILTAKERRRLRNERRESNTTNWKEEVENKLIQKTKKENKSWMDELNLDNLMKLGPQWWVVRVSRVKGQYTAEALARSLAKFFPDIDFKVYAPAIHEKKRLKSGSISVKSKPLFPGCIFLRCELNKPLHDYIKEYEGVGGFIGSKVGNTKRQINKPRPVAEDDMEAIFKQAKVEQENADKAFEEEEEERKAVVNSGNPNKELESDVSKAIVDSKPKRSSRKTSNQLTVTEEASSAKKKPKLATVHFTIFGKEDIVDLDVSEIVPETN*