Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122720 | AES60780.1 | 99.206 | 252 | 2 | 0 | 1 | 252 | 1 | 252 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122720 | sp|Q9LFF9|IPYR4_ARATH | 84.722 | 216 | 33 | 0 | 37 | 252 | 1 | 216 | 2.21e-138 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122720 | G7ICM1 | 99.206 | 252 | 2 | 0 | 1 | 252 | 1 | 252 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033380 | Msa0122720 | 0.935316 | 1.027513e-96 | -8.615850e-47 |
| Msa0074670 | Msa0122720 | 0.851501 | 8.516887e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122720 | MtrunA17_Chr1g0182331 | 100.000 | 216 | 0 | 0 | 37 | 252 | 1 | 216 | 3.84e-162 | 447 |
| Msa0122720 | MtrunA17_Chr1g0200691 | 74.419 | 258 | 26 | 2 | 21 | 239 | 29 | 285 | 4.26e-133 | 377 |
| Msa0122720 | MtrunA17_Chr8g0345781 | 79.263 | 217 | 44 | 1 | 37 | 252 | 1 | 217 | 1.04e-128 | 363 |
| Msa0122720 | MtrunA17_Chr5g0404551 | 82.741 | 197 | 34 | 0 | 56 | 252 | 17 | 213 | 1.05e-125 | 355 |
| Msa0122720 | MtrunA17_Chr8g0372981 | 80.676 | 207 | 37 | 2 | 49 | 252 | 20 | 226 | 1.49e-123 | 350 |
| Msa0122720 | MtrunA17_Chr7g0276441 | 81.034 | 174 | 32 | 1 | 79 | 252 | 21 | 193 | 7.56e-103 | 296 |
| Msa0122720 | MtrunA17_Chr1g0210921 | 49.412 | 85 | 38 | 3 | 171 | 250 | 12 | 96 | 1.55e-18 | 79.0 |
| Msa0122720 | MtrunA17_Chr2g0280151 | 34.356 | 163 | 80 | 6 | 75 | 213 | 82 | 241 | 8.22e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122720 | AT3G53620.1 | 84.722 | 216 | 33 | 0 | 37 | 252 | 1 | 216 | 2.24e-139 | 390 |
| Msa0122720 | AT1G01050.1 | 86.802 | 197 | 26 | 0 | 56 | 252 | 16 | 212 | 6.52e-130 | 366 |
| Msa0122720 | AT1G01050.2 | 86.802 | 197 | 26 | 0 | 56 | 252 | 16 | 212 | 6.52e-130 | 366 |
| Msa0122720 | AT2G46860.1 | 84.264 | 197 | 31 | 0 | 56 | 252 | 20 | 216 | 1.59e-127 | 360 |
| Msa0122720 | AT4G01480.1 | 78.302 | 212 | 45 | 1 | 42 | 252 | 5 | 216 | 4.38e-123 | 349 |
| Msa0122720 | AT4G01480.2 | 78.302 | 212 | 45 | 1 | 42 | 252 | 5 | 216 | 4.38e-123 | 349 |
| Msa0122720 | AT2G18230.1 | 79.487 | 195 | 40 | 0 | 58 | 252 | 24 | 218 | 9.76e-117 | 333 |
| Msa0122720 | AT5G09650.1 | 34.161 | 161 | 83 | 5 | 75 | 213 | 92 | 251 | 7.24e-16 | 75.9 |
Find 106 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTAACTTTGTTAAATTT+TGG | 0.082092 | 1_3:+49514914 | Msa0122720:three_prime_UTR |
| CAAGAAAACTGGACTTATTA+AGG | 0.226202 | 1_3:+49513421 | Msa0122720:CDS |
| GAATTGTAGGTGGTTGAAAT+TGG | 0.267700 | 1_3:+49513368 | Msa0122720:intron |
| TCGCGGTGGGAATCTTGTTT+GGG | 0.281569 | 1_3:-49512299 | None:intergenic |
| TTGAAGATCTTGGGAGCTTC+AGG | 0.285820 | 1_3:-49512551 | None:intergenic |
| TTCGCGGTGGGAATCTTGTT+TGG | 0.304545 | 1_3:-49512300 | None:intergenic |
| AATTGTAACTGTTAATGTTC+AGG | 0.318137 | 1_3:+49511600 | Msa0122720:intron |
| TTTCTTCGTGCCAAAGCTAT+TGG | 0.320096 | 1_3:+49514252 | Msa0122720:CDS |
| ACTGTTAATGTTCAGGCTAA+TGG | 0.334959 | 1_3:+49511607 | Msa0122720:exon |
| ATCTTGTTTGGGGTCTCAAT+TGG | 0.355560 | 1_3:-49512288 | None:intergenic |
| TATGAACTTGACAAGAAAAC+TGG | 0.356052 | 1_3:+49513410 | Msa0122720:CDS |
| CAACAGGAGCCAGTTCTTCC+TGG | 0.361097 | 1_3:+49514225 | Msa0122720:intron |
| ACAAATGTTACATGCTATAT+AGG | 0.367406 | 1_3:-49514852 | None:intergenic |
| AATTCATCAAGTACTATGTT+TGG | 0.372862 | 1_3:-49515036 | None:intergenic |
| GCTTACACAATTGAAGATCT+TGG | 0.376721 | 1_3:-49512561 | None:intergenic |
| TGCTTAAGTAGAGGTGGAAA+TGG | 0.377784 | 1_3:-49511175 | None:intergenic |
| GTTGTGTATCCTCACAACTA+TGG | 0.379576 | 1_3:+49513548 | Msa0122720:CDS |
| ATAATAACCAAGACATCAAT+GGG | 0.410303 | 1_3:-49513605 | None:intergenic |
| TTGTTTGGGGTCTCAATTGG+TGG | 0.420292 | 1_3:-49512285 | None:intergenic |
| CATAATAACCAAGACATCAA+TGG | 0.424808 | 1_3:-49513606 | None:intergenic |
| TGATGTCTTGGTTATTATGC+AGG | 0.426309 | 1_3:+49513610 | Msa0122720:CDS |
| AGAAAGCAGCCAGGAAGAAC+TGG | 0.439777 | 1_3:-49514234 | None:intergenic |
| CTTACACAATTGAAGATCTT+GGG | 0.443122 | 1_3:-49512560 | None:intergenic |
| ATCTCGAGGGAGAGAGAATA+CGG | 0.444997 | 1_3:-49511281 | None:intergenic |
| CCATGGCATGATCTTGAGAT+AGG | 0.448676 | 1_3:+49512393 | Msa0122720:CDS |
| GGCGGTAGTATTGATGCATA+TGG | 0.450578 | 1_3:+49514739 | Msa0122720:exon |
| AATTGTAGGTGGTTGAAATT+GGG | 0.453086 | 1_3:+49513369 | Msa0122720:intron |
| CAGGCTAATGGCTTCTGAAT+CGG | 0.459794 | 1_3:+49511619 | Msa0122720:CDS |
| TCAGATACCTGATCAATCAT+AGG | 0.466855 | 1_3:-49514282 | None:intergenic |
| ACTACGTTGTGGAGAGTTTG+AGG | 0.477682 | 1_3:+49514718 | Msa0122720:CDS |
| GGAGAGAGAATACGGAAGTA+AGG | 0.480258 | 1_3:-49511273 | None:intergenic |
| ACGATTTCAGAAACTGCAAT+TGG | 0.481587 | 1_3:-49511787 | None:intergenic |
| CACAACGTAGTCTGCATACA+AGG | 0.481707 | 1_3:-49514706 | None:intergenic |
| TCTCATGCCTATGATTGATC+AGG | 0.492132 | 1_3:+49514275 | Msa0122720:CDS |
| GCTTAAGTAGAGGTGGAAAT+GGG | 0.493203 | 1_3:-49511174 | None:intergenic |
| CTTGTTGAGGATGCAAAGGA+AGG | 0.495192 | 1_3:-49511207 | None:intergenic |
| TTGTGTATCCTCACAACTAT+GGG | 0.498500 | 1_3:+49513549 | Msa0122720:CDS |
| CTTAAACAGAAAAGTGGAAG+CGG | 0.498946 | 1_3:+49511115 | None:intergenic |
| CGCGGTGGGAATCTTGTTTG+GGG | 0.501491 | 1_3:-49512298 | None:intergenic |
| AACGTGAAGAAGGAATGAAA+TGG | 0.503173 | 1_3:-49511248 | None:intergenic |
| AGGCATGAGACCAATAGCTT+TGG | 0.503559 | 1_3:-49514262 | None:intergenic |
| GAAGAAGGAATGAAATGGAA+TGG | 0.503560 | 1_3:-49511243 | None:intergenic |
| ACCATCCTCACAAATAGTGC+GGG | 0.507168 | 1_3:-49513579 | None:intergenic |
| AATATGCATGTGTTGTCAGC+TGG | 0.509898 | 1_3:-49514878 | None:intergenic |
| GGATGCAAAGGAAGGGAAGG+AGG | 0.510845 | 1_3:-49511199 | None:intergenic |
| CCCCGCACTATTTGTGAGGA+TGG | 0.512555 | 1_3:+49513578 | Msa0122720:CDS |
| TGCTATATAGGATAGGATTA+CGG | 0.512938 | 1_3:-49514840 | None:intergenic |
| AAGTACTATGTTTGGATGAG+AGG | 0.518394 | 1_3:-49515028 | None:intergenic |
| GAAAGGATCCTCTCATTAAG+AGG | 0.518691 | 1_3:-49512339 | None:intergenic |
| TAGGCATTACAATGATATCA+AGG | 0.527302 | 1_3:+49514431 | Msa0122720:CDS |
| GGAGGATGCTTAAGTAGAGG+TGG | 0.532103 | 1_3:-49511181 | None:intergenic |
| TGGTGACCCCATTGATGTCT+TGG | 0.533354 | 1_3:+49513598 | Msa0122720:CDS |
| TGTGCTTCCTCTTCAACTGT+CGG | 0.533610 | 1_3:+49511305 | Msa0122720:five_prime_UTR |
| AATGGTTGCTTTGCTTGTTG+AGG | 0.537493 | 1_3:-49511220 | None:intergenic |
| AAGAGGAAGCACAGATCTCG+AGG | 0.542306 | 1_3:-49511295 | None:intergenic |
| AAGTAAGGAAAACGTGAAGA+AGG | 0.543930 | 1_3:-49511258 | None:intergenic |
| CTCATTAAGAGGTGGTGGTG+AGG | 0.544313 | 1_3:-49512328 | None:intergenic |
| TGAGGATGCAAAGGAAGGGA+AGG | 0.545417 | 1_3:-49511202 | None:intergenic |
| GGAATGCTCAATAGCTTCAA+AGG | 0.545999 | 1_3:-49514559 | None:intergenic |
| TCCTTTCATCATTGACTAGG+AGG | 0.547208 | 1_3:+49512355 | Msa0122720:CDS |
| ATCCTCTCATTAAGAGGTGG+TGG | 0.548349 | 1_3:-49512333 | None:intergenic |
| ATTTCAGAAACTGCAATTGG+TGG | 0.561215 | 1_3:-49511784 | None:intergenic |
| GGATCCTTTCATCATTGACT+AGG | 0.568164 | 1_3:+49512352 | Msa0122720:CDS |
| GATACACAACTGATGAGTAA+AGG | 0.570339 | 1_3:-49513535 | None:intergenic |
| CAAAGGCAGATGAGGAAGGA+AGG | 0.576115 | 1_3:-49514542 | None:intergenic |
| TTAAACAGAAAAGTGGAAGC+GGG | 0.579424 | 1_3:+49511116 | None:intergenic |
| GGTCTGTTGCTGCACACCCA+TGG | 0.580873 | 1_3:+49512376 | Msa0122720:CDS |
| GAAGGAGGATGCTTAAGTAG+AGG | 0.581712 | 1_3:-49511184 | None:intergenic |
| GTGCTGATGATCCTGAGTAT+AGG | 0.582724 | 1_3:+49514412 | Msa0122720:CDS |
| GCGGTAGTATTGATGCATAT+GGG | 0.588298 | 1_3:+49514740 | Msa0122720:exon |
| TGTTACATGCTATATAGGAT+AGG | 0.588981 | 1_3:-49514847 | None:intergenic |
| ACCTCCTAGTCAATGATGAA+AGG | 0.589112 | 1_3:-49512356 | None:intergenic |
| TAGGTGGTTGAAATTGGGAA+AGG | 0.590703 | 1_3:+49513374 | Msa0122720:intron |
| TGGTGAGGTGTAATTCGCGG+TGG | 0.595709 | 1_3:-49512313 | None:intergenic |
| AATAGCTTCAAAGGCAGATG+AGG | 0.596063 | 1_3:-49514550 | None:intergenic |
| TGAAATTGGGAAAGGAAACA+AGG | 0.596735 | 1_3:+49513382 | Msa0122720:CDS |
| ATATGCATGTGTTGTCAGCT+GGG | 0.599753 | 1_3:-49514877 | None:intergenic |
| CCTATCTCAAGATCATGCCA+TGG | 0.600294 | 1_3:-49512393 | None:intergenic |
| CTATCTCAAGATCATGCCAT+GGG | 0.603760 | 1_3:-49512392 | None:intergenic |
| TGGTGGTGAGGTGTAATTCG+CGG | 0.604155 | 1_3:-49512316 | None:intergenic |
| GGTGAGGTGTAATTCGCGGT+GGG | 0.605265 | 1_3:-49512312 | None:intergenic |
| GCTTCAAAGGCAGATGAGGA+AGG | 0.607869 | 1_3:-49514546 | None:intergenic |
| CACCATCCTCACAAATAGTG+CGG | 0.608255 | 1_3:-49513580 | None:intergenic |
| AAACGCACCGACAGTTGAAG+AGG | 0.611901 | 1_3:-49511312 | None:intergenic |
| ATTTCAGCTAAACGATGTGG+AGG | 0.614529 | 1_3:-49514459 | None:intergenic |
| TTGGCACGAAGAAAGCAGCC+AGG | 0.615889 | 1_3:-49514243 | None:intergenic |
| CACCACCACCTCTTAATGAG+AGG | 0.621436 | 1_3:+49512331 | Msa0122720:CDS |
| TCATTGTAATGCCTATACTC+AGG | 0.624794 | 1_3:-49514423 | None:intergenic |
| TTGTTGAGGATGCAAAGGAA+GGG | 0.629237 | 1_3:-49511206 | None:intergenic |
| TTACAAGAAGAATGAGAACA+AGG | 0.636721 | 1_3:+49514500 | Msa0122720:CDS |
| AGGAATGAAATGGAATGGAA+TGG | 0.648925 | 1_3:-49511238 | None:intergenic |
| TTTGCTTGTTGAGGATGCAA+AGG | 0.649239 | 1_3:-49511211 | None:intergenic |
| CCATCCTCACAAATAGTGCG+GGG | 0.650576 | 1_3:-49513578 | None:intergenic |
| CGGATTTCAGCTAAACGATG+TGG | 0.654970 | 1_3:-49514462 | None:intergenic |
| GAAATGGGAAAATGTGAGTG+AGG | 0.668719 | 1_3:-49511159 | None:intergenic |
| AGGATCCTCTCATTAAGAGG+TGG | 0.671103 | 1_3:-49512336 | None:intergenic |
| GGGATAAACCCATAGTTGTG+AGG | 0.674435 | 1_3:-49513557 | None:intergenic |
| CAACTGATGAGTAAAGGACC+CGG | 0.675914 | 1_3:-49513529 | None:intergenic |
| AGAGGAAGCACAGATCTCGA+GGG | 0.683236 | 1_3:-49511294 | None:intergenic |
| TTTCAGCTAAACGATGTGGA+GGG | 0.687080 | 1_3:-49514458 | None:intergenic |
| CATCCTCACAAATAGTGCGG+GGG | 0.690869 | 1_3:-49513577 | None:intergenic |
| GATGAGAGGAAAGAATCGAG+TGG | 0.700783 | 1_3:-49515014 | None:intergenic |
| TGAATCGGAAACTGTCACTG+TGG | 0.703517 | 1_3:+49511634 | Msa0122720:CDS |
| CTTGTATGCAGACTACGTTG+TGG | 0.725981 | 1_3:+49514707 | Msa0122720:CDS |
| ACGTTGTGGAGAGTTTGAGG+CGG | 0.743485 | 1_3:+49514721 | Msa0122720:CDS |
| TAATAACCAAGACATCAATG+GGG | 0.783648 | 1_3:-49513604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTTTAATCTTAAAAAA+TGG | + | chr1_3:49511948-49511967 | Msa0122720:intron | 10.0% |
| !!! | ACTTTTTTTTTTTTTTTTTC+TGG | + | chr1_3:49512138-49512157 | Msa0122720:intron | 10.0% |
| !!! | CTTTTTTTTTTTTTTTTTCT+GGG | + | chr1_3:49512139-49512158 | Msa0122720:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTCTG+GGG | + | chr1_3:49512140-49512159 | Msa0122720:intron | 10.0% |
| !! | TATTAAAAAAAAAAAACACC+TGG | - | chr1_3:49511905-49511924 | None:intergenic | 15.0% |
| !!! | ATTTACTAGTAAGATATTTT+TGG | + | chr1_3:49511979-49511998 | Msa0122720:intron | 15.0% |
| !!! | ACATAATTTCAATGATATTT+TGG | - | chr1_3:49512191-49512210 | None:intergenic | 15.0% |
| !!! | TGATTATGATTATTTTTTTC+AGG | + | chr1_3:49512248-49512267 | Msa0122720:intron | 15.0% |
| !!! | AATCATCATAAAAGATATTT+TGG | - | chr1_3:49512863-49512882 | None:intergenic | 15.0% |
| !!! | TATGATGATTATTTTTTCTA+TGG | + | chr1_3:49512873-49512892 | Msa0122720:intron | 15.0% |
| !!! | AATGAAATTTTCTCAAGTAT+TGG | - | chr1_3:49511435-49511454 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTGTGAGATTAA+GGG | + | chr1_3:49511867-49511886 | Msa0122720:intron | 20.0% |
| !! | AAAAAAAAAGTTATGATGCA+TGG | - | chr1_3:49512129-49512148 | None:intergenic | 20.0% |
| !! | GTATATGTTTCTTAGAATAA+TGG | + | chr1_3:49512611-49512630 | Msa0122720:intron | 20.0% |
| !! | TTGAAATATTGATGAATTGT+AGG | + | chr1_3:49513355-49513374 | Msa0122720:intron | 20.0% |
| !!! | TTGTGAGTAAATTTTGAATA+TGG | + | chr1_3:49514068-49514087 | Msa0122720:intron | 20.0% |
| !! | TACAATTTCACAATAATACA+TGG | + | chr1_3:49514100-49514119 | Msa0122720:intron | 20.0% |
| !! | ACTAATTCTTATGAAATTCA+GGG | + | chr1_3:49514360-49514379 | Msa0122720:intron | 20.0% |
| !!! | TTTTATTTGTATTGTTGTGA+AGG | + | chr1_3:49514682-49514701 | Msa0122720:intron | 20.0% |
| !!! | TGCTTAACTTTGTTAAATTT+TGG | + | chr1_3:49514914-49514933 | Msa0122720:three_prime_UTR | 20.0% |
| ! | GAAAACACTATGAAATGAAA+CGG | - | chr1_3:49511358-49511377 | None:intergenic | 25.0% |
| ! | AATTGTAACTGTTAATGTTC+AGG | + | chr1_3:49511600-49511619 | Msa0122720:intron | 25.0% |
| !!! | TGTTTTCTTTGCTTTTGAAA+GGG | + | chr1_3:49511748-49511767 | Msa0122720:intron | 25.0% |
| ! | TGCAATCTTGTTAATTCATT+TGG | + | chr1_3:49511839-49511858 | Msa0122720:intron | 25.0% |
| !!! | CATTTTGTTTTGTGAGATTA+AGG | + | chr1_3:49511866-49511885 | Msa0122720:intron | 25.0% |
| ! | TAAGCAATGTTGTTGAAAAA+TGG | + | chr1_3:49512416-49512435 | Msa0122720:intron | 25.0% |
| ! | ATATTGATCATTAGAGCATA+AGG | + | chr1_3:49512443-49512462 | Msa0122720:intron | 25.0% |
| !!! | ACATTTTTTACTTTGTATGC+TGG | + | chr1_3:49512684-49512703 | Msa0122720:intron | 25.0% |
| ! | AGCAGGTTTATTATAAGAAA+TGG | + | chr1_3:49513025-49513044 | Msa0122720:intron | 25.0% |
| ! | AGAATGTACAAGTTCAAAAA+AGG | - | chr1_3:49513268-49513287 | None:intergenic | 25.0% |
| ! | TTTGAACTTGTACATTCTTA+AGG | + | chr1_3:49513270-49513289 | Msa0122720:intron | 25.0% |
| ! | CATCAATATTTCAAACATGA+AGG | - | chr1_3:49513349-49513368 | None:intergenic | 25.0% |
| ! | AAATATTGATGAATTGTAGG+TGG | + | chr1_3:49513358-49513377 | Msa0122720:intron | 25.0% |
| ! | ATAATAACCAAGACATCAAT+GGG | - | chr1_3:49513608-49513627 | None:intergenic | 25.0% |
| !!! | CTTTTGGAATTCAAAGAATA+CGG | - | chr1_3:49513778-49513797 | None:intergenic | 25.0% |
| !! | AATACATACATGTTTCCTTT+TGG | - | chr1_3:49513794-49513813 | None:intergenic | 25.0% |
| ! | GTATAATAATAGTCAACTTC+TGG | + | chr1_3:49513851-49513870 | Msa0122720:intron | 25.0% |
| ! | CACTAATTCTTATGAAATTC+AGG | + | chr1_3:49514359-49514378 | Msa0122720:intron | 25.0% |
| ! | TCTGTTAAAACATAATTTCC+AGG | + | chr1_3:49514624-49514643 | Msa0122720:intron | 25.0% |
| ! | ACAAATGTTACATGCTATAT+AGG | - | chr1_3:49514855-49514874 | None:intergenic | 25.0% |
| ! | AATTCATCAAGTACTATGTT+TGG | - | chr1_3:49515039-49515058 | None:intergenic | 25.0% |
| ATAAAAAATGAAGTTGCGTG+TGG | - | chr1_3:49511403-49511422 | None:intergenic | 30.0% | |
| ATAACATGGAGTTTGCAAAA+CGG | - | chr1_3:49511490-49511509 | None:intergenic | 30.0% | |
| TCAGTAACTCAACAATAACA+TGG | - | chr1_3:49511504-49511523 | None:intergenic | 30.0% | |
| !! | GTGTTTTCTTTGCTTTTGAA+AGG | + | chr1_3:49511747-49511766 | Msa0122720:intron | 30.0% |
| ! | ATGTCCAAACATGATAATGA+TGG | + | chr1_3:49512207-49512226 | Msa0122720:intron | 30.0% |
| AGATCCATCATTATCATGTT+TGG | - | chr1_3:49512214-49512233 | None:intergenic | 30.0% | |
| !!! | TTTTTTTCAGGCTGAAGAAA+TGG | + | chr1_3:49512260-49512279 | Msa0122720:intron | 30.0% |
| CTTACACAATTGAAGATCTT+GGG | - | chr1_3:49512563-49512582 | None:intergenic | 30.0% | |
| ! | GCTGGAATGAAATTTTGTAA+TGG | + | chr1_3:49512702-49512721 | Msa0122720:intron | 30.0% |
| TAATTGTGATAGAGAGAACA+TGG | + | chr1_3:49512736-49512755 | Msa0122720:intron | 30.0% | |
| AAGAAACACCAAAAGTAAAC+AGG | + | chr1_3:49512906-49512925 | Msa0122720:intron | 30.0% | |
| CTATGTGAATCATCAACTAA+GGG | - | chr1_3:49512932-49512951 | None:intergenic | 30.0% | |
| ACTATGTGAATCATCAACTA+AGG | - | chr1_3:49512933-49512952 | None:intergenic | 30.0% | |
| ! | ATTAAGTCTGATTTGTGTTC+AGG | - | chr1_3:49513102-49513121 | None:intergenic | 30.0% |
| TTATGTTGTGATCTTCATTG+AGG | + | chr1_3:49513309-49513328 | Msa0122720:intron | 30.0% | |
| TATGTTGTGATCTTCATTGA+GGG | + | chr1_3:49513310-49513329 | Msa0122720:intron | 30.0% | |
| AATTGTAGGTGGTTGAAATT+GGG | + | chr1_3:49513369-49513388 | Msa0122720:intron | 30.0% | |
| TATGAACTTGACAAGAAAAC+TGG | + | chr1_3:49513410-49513429 | Msa0122720:CDS | 30.0% | |
| CAAGAAAACTGGACTTATTA+AGG | + | chr1_3:49513421-49513440 | Msa0122720:CDS | 30.0% | |
| TGGACTTATTAAGGTGATTA+TGG | + | chr1_3:49513430-49513449 | Msa0122720:intron | 30.0% | |
| TAATAACCAAGACATCAATG+GGG | - | chr1_3:49513607-49513626 | None:intergenic | 30.0% | |
| CATAATAACCAAGACATCAA+TGG | - | chr1_3:49513609-49513628 | None:intergenic | 30.0% | |
| !! | CAACGAAAAGTTAATTTGCA+AGG | - | chr1_3:49513664-49513683 | None:intergenic | 30.0% |
| TGCAATTCTGTTCTCAAATT+TGG | + | chr1_3:49513727-49513746 | Msa0122720:intron | 30.0% | |
| GGATTCTGTTATTAGTTATG+TGG | + | chr1_3:49513748-49513767 | Msa0122720:intron | 30.0% | |
| CGTATTCTTTGAATTCCAAA+AGG | + | chr1_3:49513776-49513795 | Msa0122720:intron | 30.0% | |
| TGATTTCAAATGCAAGAAGT+TGG | + | chr1_3:49513881-49513900 | Msa0122720:intron | 30.0% | |
| ATAGCTCAGAAGTAAAGATA+AGG | - | chr1_3:49513999-49514018 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTAGCCGACTCA+AGG | + | chr1_3:49514029-49514048 | Msa0122720:intron | 30.0% |
| !!! | ATTCTTTTTTGTGCTACAAC+AGG | + | chr1_3:49514209-49514228 | Msa0122720:intron | 30.0% |
| TAGGCATTACAATGATATCA+AGG | + | chr1_3:49514431-49514450 | Msa0122720:CDS | 30.0% | |
| TGTAATCTTCAAAAAAGCGA+CGG | - | chr1_3:49514485-49514504 | None:intergenic | 30.0% | |
| TTACAAGAAGAATGAGAACA+AGG | + | chr1_3:49514500-49514519 | Msa0122720:CDS | 30.0% | |
| TTCCATGTAAGTAACAATGA+TGG | + | chr1_3:49514578-49514597 | Msa0122720:intron | 30.0% | |
| TCCATGTAAGTAACAATGAT+GGG | + | chr1_3:49514579-49514598 | Msa0122720:intron | 30.0% | |
| TGCTATATAGGATAGGATTA+CGG | - | chr1_3:49514843-49514862 | None:intergenic | 30.0% | |
| TGTTACATGCTATATAGGAT+AGG | - | chr1_3:49514850-49514869 | None:intergenic | 30.0% | |
| AGGAATGAAATGGAATGGAA+TGG | - | chr1_3:49511241-49511260 | None:intergenic | 35.0% | |
| GAAGAAGGAATGAAATGGAA+TGG | - | chr1_3:49511246-49511265 | None:intergenic | 35.0% | |
| AACGTGAAGAAGGAATGAAA+TGG | - | chr1_3:49511251-49511270 | None:intergenic | 35.0% | |
| AAGTAAGGAAAACGTGAAGA+AGG | - | chr1_3:49511261-49511280 | None:intergenic | 35.0% | |
| AACACTATGAAATGAAACGG+TGG | - | chr1_3:49511355-49511374 | None:intergenic | 35.0% | |
| ACTGTTAATGTTCAGGCTAA+TGG | + | chr1_3:49511607-49511626 | Msa0122720:exon | 35.0% | |
| ATTTCAGAAACTGCAATTGG+TGG | - | chr1_3:49511787-49511806 | None:intergenic | 35.0% | |
| ACGATTTCAGAAACTGCAAT+TGG | - | chr1_3:49511790-49511809 | None:intergenic | 35.0% | |
| ! | TAGTGTTTTCCCAACAATGT+AGG | + | chr1_3:49512527-49512546 | Msa0122720:intron | 35.0% |
| GCTTACACAATTGAAGATCT+TGG | - | chr1_3:49512564-49512583 | None:intergenic | 35.0% | |
| CTGCTTAACTAGATAAAGCA+AGG | - | chr1_3:49513010-49513029 | None:intergenic | 35.0% | |
| CTTGCTTTATCTAGTTAAGC+AGG | + | chr1_3:49513008-49513027 | Msa0122720:intron | 35.0% | |
| TATATTGCTGACCTGTTGAA+TGG | + | chr1_3:49513055-49513074 | Msa0122720:intron | 35.0% | |
| GATTGTTTCCAATCACAACT+TGG | + | chr1_3:49513236-49513255 | Msa0122720:intron | 35.0% | |
| GAACTTGTACATTCTTAAGG+TGG | + | chr1_3:49513273-49513292 | Msa0122720:intron | 35.0% | |
| GAATTGTAGGTGGTTGAAAT+TGG | + | chr1_3:49513368-49513387 | Msa0122720:intron | 35.0% | |
| TGAAATTGGGAAAGGAAACA+AGG | + | chr1_3:49513382-49513401 | Msa0122720:CDS | 35.0% | |
| AATGGCAACAAGTACAACAA+TGG | - | chr1_3:49513474-49513493 | None:intergenic | 35.0% | |
| ! | CTACACATAAAAGCATGCTT+AGG | - | chr1_3:49513504-49513523 | None:intergenic | 35.0% |
| ! | CTAAGCATGCTTTTATGTGT+AGG | + | chr1_3:49513502-49513521 | Msa0122720:intron | 35.0% |
| GATACACAACTGATGAGTAA+AGG | - | chr1_3:49513538-49513557 | None:intergenic | 35.0% | |
| TTGTGTATCCTCACAACTAT+GGG | + | chr1_3:49513549-49513568 | Msa0122720:CDS | 35.0% | |
| TGATGTCTTGGTTATTATGC+AGG | + | chr1_3:49513610-49513629 | Msa0122720:CDS | 35.0% | |
| TTTCAAATGCAAGAAGTTGG+TGG | + | chr1_3:49513884-49513903 | Msa0122720:intron | 35.0% | |
| AGATAAGGCTCAATATGTCA+AGG | - | chr1_3:49513984-49514003 | None:intergenic | 35.0% | |
| !! | ACATTTTGATCACCTTGAGT+CGG | - | chr1_3:49514044-49514063 | None:intergenic | 35.0% |
| TCAGATACCTGATCAATCAT+AGG | - | chr1_3:49514285-49514304 | None:intergenic | 35.0% | |
| AGTTATTGCCATCTAGGAAA+GGG | - | chr1_3:49514314-49514333 | None:intergenic | 35.0% | |
| AAGTTATTGCCATCTAGGAA+AGG | - | chr1_3:49514315-49514334 | None:intergenic | 35.0% | |
| AAGAGAAGTTATTGCCATCT+AGG | - | chr1_3:49514320-49514339 | None:intergenic | 35.0% | |
| TCATTGTAATGCCTATACTC+AGG | - | chr1_3:49514426-49514445 | None:intergenic | 35.0% | |
| ! | ACCCATCATTGTTACTTACA+TGG | - | chr1_3:49514583-49514602 | None:intergenic | 35.0% |
| GAGTATGAAAACTGAAATCC+TGG | - | chr1_3:49514645-49514664 | None:intergenic | 35.0% | |
| ! | GATGCATATGGGATTTTGTT+TGG | + | chr1_3:49514751-49514770 | Msa0122720:three_prime_UTR | 35.0% |
| AAGTACTATGTTTGGATGAG+AGG | - | chr1_3:49515031-49515050 | None:intergenic | 35.0% | |
| GAAATGGGAAAATGTGAGTG+AGG | - | chr1_3:49511162-49511181 | None:intergenic | 40.0% | |
| GCTTAAGTAGAGGTGGAAAT+GGG | - | chr1_3:49511177-49511196 | None:intergenic | 40.0% | |
| TGCTTAAGTAGAGGTGGAAA+TGG | - | chr1_3:49511178-49511197 | None:intergenic | 40.0% | |
| TTGTTGAGGATGCAAAGGAA+GGG | - | chr1_3:49511209-49511228 | None:intergenic | 40.0% | |
| ! | TTTGCTTGTTGAGGATGCAA+AGG | - | chr1_3:49511214-49511233 | None:intergenic | 40.0% |
| ! | AATGGTTGCTTTGCTTGTTG+AGG | - | chr1_3:49511223-49511242 | None:intergenic | 40.0% |
| AATGAAGTTGCGTGTGGTTA+TGG | - | chr1_3:49511397-49511416 | None:intergenic | 40.0% | |
| !!! | CTTTTGAAAGGGTGTTTCTG+AGG | + | chr1_3:49511759-49511778 | Msa0122720:intron | 40.0% |
| ! | ATCTTGTTTGGGGTCTCAAT+TGG | - | chr1_3:49512291-49512310 | None:intergenic | 40.0% |
| GAAAGGATCCTCTCATTAAG+AGG | - | chr1_3:49512342-49512361 | None:intergenic | 40.0% | |
| ! | GGATCCTTTCATCATTGACT+AGG | + | chr1_3:49512352-49512371 | Msa0122720:CDS | 40.0% |
| ! | TCCTTTCATCATTGACTAGG+AGG | + | chr1_3:49512355-49512374 | Msa0122720:CDS | 40.0% |
| ACCTCCTAGTCAATGATGAA+AGG | - | chr1_3:49512359-49512378 | None:intergenic | 40.0% | |
| CTATCTCAAGATCATGCCAT+GGG | - | chr1_3:49512395-49512414 | None:intergenic | 40.0% | |
| ! | ACTAAGGGCCTGTTTACTTT+TGG | - | chr1_3:49512917-49512936 | None:intergenic | 40.0% |
| CAACAGGTCAGCAATATAAC+AGG | - | chr1_3:49513053-49513072 | None:intergenic | 40.0% | |
| TAGTAATGCTTGTGCGCTAT+AGG | + | chr1_3:49513125-49513144 | Msa0122720:intron | 40.0% | |
| AGTAATGCTTGTGCGCTATA+GGG | + | chr1_3:49513126-49513145 | Msa0122720:intron | 40.0% | |
| GGTTAAGCGTTAAGCATGTT+GGG | + | chr1_3:49513147-49513166 | Msa0122720:intron | 40.0% | |
| GTTTCCAATCACAACTTGGA+CGG | + | chr1_3:49513240-49513259 | Msa0122720:intron | 40.0% | |
| TAGGTGGTTGAAATTGGGAA+AGG | + | chr1_3:49513374-49513393 | Msa0122720:intron | 40.0% | |
| !! | GCTTTTATGTGTAGGTTGAC+CGG | + | chr1_3:49513510-49513529 | Msa0122720:intron | 40.0% |
| !! | CTTTTATGTGTAGGTTGACC+GGG | + | chr1_3:49513511-49513530 | Msa0122720:intron | 40.0% |
| GTTGTGTATCCTCACAACTA+TGG | + | chr1_3:49513548-49513567 | Msa0122720:CDS | 40.0% | |
| ! | CTTGCATTTGAAATCACAGC+TGG | - | chr1_3:49513877-49513896 | None:intergenic | 40.0% |
| TTTCTTCGTGCCAAAGCTAT+TGG | + | chr1_3:49514252-49514271 | Msa0122720:CDS | 40.0% | |
| TCTCATGCCTATGATTGATC+AGG | + | chr1_3:49514275-49514294 | Msa0122720:CDS | 40.0% | |
| GAAACATTCCCTTTCCTAGA+TGG | + | chr1_3:49514303-49514322 | Msa0122720:intron | 40.0% | |
| TTTCAGCTAAACGATGTGGA+GGG | - | chr1_3:49514461-49514480 | None:intergenic | 40.0% | |
| ATTTCAGCTAAACGATGTGG+AGG | - | chr1_3:49514462-49514481 | None:intergenic | 40.0% | |
| AATAGCTTCAAAGGCAGATG+AGG | - | chr1_3:49514553-49514572 | None:intergenic | 40.0% | |
| GGAATGCTCAATAGCTTCAA+AGG | - | chr1_3:49514562-49514581 | None:intergenic | 40.0% | |
| !! | GCGGTAGTATTGATGCATAT+GGG | + | chr1_3:49514740-49514759 | Msa0122720:exon | 40.0% |
| ATATGCATGTGTTGTCAGCT+GGG | - | chr1_3:49514880-49514899 | None:intergenic | 40.0% | |
| AATATGCATGTGTTGTCAGC+TGG | - | chr1_3:49514881-49514900 | None:intergenic | 40.0% | |
| ! | AGAATCGAGTGGCATTTTAC+AGG | - | chr1_3:49515006-49515025 | None:intergenic | 40.0% |
| GAAGGAGGATGCTTAAGTAG+AGG | - | chr1_3:49511187-49511206 | None:intergenic | 45.0% | |
| CTTGTTGAGGATGCAAAGGA+AGG | - | chr1_3:49511210-49511229 | None:intergenic | 45.0% | |
| GGAGAGAGAATACGGAAGTA+AGG | - | chr1_3:49511276-49511295 | None:intergenic | 45.0% | |
| ATCTCGAGGGAGAGAGAATA+CGG | - | chr1_3:49511284-49511303 | None:intergenic | 45.0% | |
| TGTGCTTCCTCTTCAACTGT+CGG | + | chr1_3:49511305-49511324 | Msa0122720:five_prime_UTR | 45.0% | |
| CGGTGGCGTAAAAGAGAAAA+GGG | - | chr1_3:49511338-49511357 | None:intergenic | 45.0% | |
| ACGGTGGCGTAAAAGAGAAA+AGG | - | chr1_3:49511339-49511358 | None:intergenic | 45.0% | |
| !! | GTGGTTATGGAGCATTGAGA+CGG | - | chr1_3:49511384-49511403 | None:intergenic | 45.0% |
| CAGGCTAATGGCTTCTGAAT+CGG | + | chr1_3:49511619-49511638 | Msa0122720:CDS | 45.0% | |
| TGAATCGGAAACTGTCACTG+TGG | + | chr1_3:49511634-49511653 | Msa0122720:CDS | 45.0% | |
| TAAGGGTAAAAAGCAGCACC+AGG | + | chr1_3:49511884-49511903 | Msa0122720:intron | 45.0% | |
| ! | TTGTTTGGGGTCTCAATTGG+TGG | - | chr1_3:49512288-49512307 | None:intergenic | 45.0% |
| ATCCTCTCATTAAGAGGTGG+TGG | - | chr1_3:49512336-49512355 | None:intergenic | 45.0% | |
| AGGATCCTCTCATTAAGAGG+TGG | - | chr1_3:49512339-49512358 | None:intergenic | 45.0% | |
| CCTATCTCAAGATCATGCCA+TGG | - | chr1_3:49512396-49512415 | None:intergenic | 45.0% | |
| CCATGGCATGATCTTGAGAT+AGG | + | chr1_3:49512393-49512412 | Msa0122720:CDS | 45.0% | |
| GCTTCAGGACCTACATTGTT+GGG | - | chr1_3:49512539-49512558 | None:intergenic | 45.0% | |
| AGCTTCAGGACCTACATTGT+TGG | - | chr1_3:49512540-49512559 | None:intergenic | 45.0% | |
| TTGAAGATCTTGGGAGCTTC+AGG | - | chr1_3:49512554-49512573 | None:intergenic | 45.0% | |
| TCAACACGCATCCATTCAAC+AGG | - | chr1_3:49513069-49513088 | None:intergenic | 45.0% | |
| GGGTTAAGCGTTAAGCATGT+TGG | + | chr1_3:49513146-49513165 | Msa0122720:intron | 45.0% | |
| GCATGCTTAGGAACAGCAAA+TGG | - | chr1_3:49513492-49513511 | None:intergenic | 45.0% | |
| CAACTGATGAGTAAAGGACC+CGG | - | chr1_3:49513532-49513551 | None:intergenic | 45.0% | |
| GGGATAAACCCATAGTTGTG+AGG | - | chr1_3:49513560-49513579 | None:intergenic | 45.0% | |
| ACCATCCTCACAAATAGTGC+GGG | - | chr1_3:49513582-49513601 | None:intergenic | 45.0% | |
| CACCATCCTCACAAATAGTG+CGG | - | chr1_3:49513583-49513602 | None:intergenic | 45.0% | |
| AGGCATGAGACCAATAGCTT+TGG | - | chr1_3:49514265-49514284 | None:intergenic | 45.0% | |
| ! | GTGCTGATGATCCTGAGTAT+AGG | + | chr1_3:49514412-49514431 | Msa0122720:CDS | 45.0% |
| CGGATTTCAGCTAAACGATG+TGG | - | chr1_3:49514465-49514484 | None:intergenic | 45.0% | |
| CACAACGTAGTCTGCATACA+AGG | - | chr1_3:49514709-49514728 | None:intergenic | 45.0% | |
| CTTGTATGCAGACTACGTTG+TGG | + | chr1_3:49514707-49514726 | Msa0122720:CDS | 45.0% | |
| ACTACGTTGTGGAGAGTTTG+AGG | + | chr1_3:49514718-49514737 | Msa0122720:CDS | 45.0% | |
| !! | GGCGGTAGTATTGATGCATA+TGG | + | chr1_3:49514739-49514758 | Msa0122720:exon | 45.0% |
| GATGAGAGGAAAGAATCGAG+TGG | - | chr1_3:49515017-49515036 | None:intergenic | 45.0% | |
| GGAGGATGCTTAAGTAGAGG+TGG | - | chr1_3:49511184-49511203 | None:intergenic | 50.0% | |
| TGAGGATGCAAAGGAAGGGA+AGG | - | chr1_3:49511205-49511224 | None:intergenic | 50.0% | |
| ! | AGAGGAAGCACAGATCTCGA+GGG | - | chr1_3:49511297-49511316 | None:intergenic | 50.0% |
| ! | AAGAGGAAGCACAGATCTCG+AGG | - | chr1_3:49511298-49511317 | None:intergenic | 50.0% |
| ! | AAACGCACCGACAGTTGAAG+AGG | - | chr1_3:49511315-49511334 | None:intergenic | 50.0% |
| TCGGAAACTGTCACTGTGGT+TGG | + | chr1_3:49511638-49511657 | Msa0122720:intron | 50.0% | |
| ! | TCGCGGTGGGAATCTTGTTT+GGG | - | chr1_3:49512302-49512321 | None:intergenic | 50.0% |
| TTCGCGGTGGGAATCTTGTT+TGG | - | chr1_3:49512303-49512322 | None:intergenic | 50.0% | |
| ! | TGGTGGTGAGGTGTAATTCG+CGG | - | chr1_3:49512319-49512338 | None:intergenic | 50.0% |
| ! | CTCATTAAGAGGTGGTGGTG+AGG | - | chr1_3:49512331-49512350 | None:intergenic | 50.0% |
| CACCACCACCTCTTAATGAG+AGG | + | chr1_3:49512331-49512350 | Msa0122720:CDS | 50.0% | |
| GGAACCGTCCAAGTTGTGAT+TGG | - | chr1_3:49513247-49513266 | None:intergenic | 50.0% | |
| TATCCCCCGCACTATTTGTG+AGG | + | chr1_3:49513574-49513593 | Msa0122720:CDS | 50.0% | |
| CATCCTCACAAATAGTGCGG+GGG | - | chr1_3:49513580-49513599 | None:intergenic | 50.0% | |
| CCATCCTCACAAATAGTGCG+GGG | - | chr1_3:49513581-49513600 | None:intergenic | 50.0% | |
| TGGTGACCCCATTGATGTCT+TGG | + | chr1_3:49513598-49513617 | Msa0122720:CDS | 50.0% | |
| AGAAAGCAGCCAGGAAGAAC+TGG | - | chr1_3:49514237-49514256 | None:intergenic | 50.0% | |
| CAAAGGCAGATGAGGAAGGA+AGG | - | chr1_3:49514545-49514564 | None:intergenic | 50.0% | |
| GCTTCAAAGGCAGATGAGGA+AGG | - | chr1_3:49514549-49514568 | None:intergenic | 50.0% | |
| ACGTTGTGGAGAGTTTGAGG+CGG | + | chr1_3:49514721-49514740 | Msa0122720:CDS | 50.0% | |
| GGATGCAAAGGAAGGGAAGG+AGG | - | chr1_3:49511202-49511221 | None:intergenic | 55.0% | |
| ! | CGCGGTGGGAATCTTGTTTG+GGG | - | chr1_3:49512301-49512320 | None:intergenic | 55.0% |
| GGTGAGGTGTAATTCGCGGT+GGG | - | chr1_3:49512315-49512334 | None:intergenic | 55.0% | |
| TGGTGAGGTGTAATTCGCGG+TGG | - | chr1_3:49512316-49512335 | None:intergenic | 55.0% | |
| CCCCGCACTATTTGTGAGGA+TGG | + | chr1_3:49513578-49513597 | Msa0122720:CDS | 55.0% | |
| CAACAGGAGCCAGTTCTTCC+TGG | + | chr1_3:49514225-49514244 | Msa0122720:intron | 55.0% | |
| TTGGCACGAAGAAAGCAGCC+AGG | - | chr1_3:49514246-49514265 | None:intergenic | 55.0% | |
| GGTCTGTTGCTGCACACCCA+TGG | + | chr1_3:49512376-49512395 | Msa0122720:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 49511123 | 49515083 | 49511123 | ID=Msa0122720;Name=Msa0122720 |
| chr1_3 | mRNA | 49511123 | 49515083 | 49511123 | ID=Msa0122720-mRNA-1;Parent=Msa0122720;Name=Msa0122720-mRNA-1;_AED=0.11;_eAED=0.11;_QI=213|1|1|1|0.88|0.9|10|337|252 |
| chr1_3 | exon | 49511123 | 49511326 | 49511123 | ID=Msa0122720-mRNA-1:exon:15014;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49511605 | 49511655 | 49511605 | ID=Msa0122720-mRNA-1:exon:15015;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49511769 | 49511825 | 49511769 | ID=Msa0122720-mRNA-1:exon:15016;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49512270 | 49512414 | 49512270 | ID=Msa0122720-mRNA-1:exon:15017;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49512549 | 49512577 | 49512549 | ID=Msa0122720-mRNA-1:exon:15018;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49513377 | 49513442 | 49513377 | ID=Msa0122720-mRNA-1:exon:15019;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49513524 | 49513631 | 49513524 | ID=Msa0122720-mRNA-1:exon:15020;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49514231 | 49514296 | 49514231 | ID=Msa0122720-mRNA-1:exon:15021;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49514381 | 49514583 | 49514381 | ID=Msa0122720-mRNA-1:exon:15022;Parent=Msa0122720-mRNA-1 |
| chr1_3 | exon | 49514704 | 49515083 | 49514704 | ID=Msa0122720-mRNA-1:exon:15023;Parent=Msa0122720-mRNA-1 |
| chr1_3 | five_prime_UTR | 49511123 | 49511326 | 49511123 | ID=Msa0122720-mRNA-1:five_prime_utr;Parent=Msa0122720-mRNA-1 |
| chr1_3 | five_prime_UTR | 49511605 | 49511613 | 49511605 | ID=Msa0122720-mRNA-1:five_prime_utr;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49511614 | 49511655 | 49511614 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49511769 | 49511825 | 49511769 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49512270 | 49512414 | 49512270 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49512549 | 49512577 | 49512549 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49513377 | 49513442 | 49513377 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49513524 | 49513631 | 49513524 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49514231 | 49514296 | 49514231 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49514381 | 49514583 | 49514381 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | CDS | 49514704 | 49514746 | 49514704 | ID=Msa0122720-mRNA-1:cds;Parent=Msa0122720-mRNA-1 |
| chr1_3 | three_prime_UTR | 49514747 | 49515083 | 49514747 | ID=Msa0122720-mRNA-1:three_prime_utr;Parent=Msa0122720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
