AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0124120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124120 MtrunA17_Chr1g0148811 95.646 1424 62 0 1 1424 1 1424 0.0 2771
Msa0124120 MtrunA17_Chr1g0148841 80.866 1432 263 1 4 1424 16 1447 0.0 2445
Msa0124120 MtrunA17_Chr3g0138261 66.946 1434 450 6 6 1424 16 1440 0.0 2013
Msa0124120 MtrunA17_Chr2g0332221 64.912 1425 484 7 3 1424 16 1427 0.0 1992
Msa0124120 MtrunA17_Chr4g0003981 66.246 1428 471 3 1 1424 17 1437 0.0 1991
Msa0124120 MtrunA17_Chr2g0332241 64.982 1425 484 7 3 1424 16 1428 0.0 1985
Msa0124120 MtrunA17_Chr2g0332211 64.516 1426 491 7 3 1424 97 1511 0.0 1974
Msa0124120 MtrunA17_Chr7g0262231 62.699 1445 513 5 6 1424 12 1456 0.0 1949
Msa0124120 MtrunA17_Chr7g0262241 63.268 1432 504 6 15 1424 22 1453 0.0 1932
Msa0124120 MtrunA17_Chr4g0003971 64.550 1433 462 8 1 1424 1 1396 0.0 1908
Msa0124120 MtrunA17_Chr7g0261951 63.359 1441 506 5 6 1424 12 1452 0.0 1907
Msa0124120 MtrunA17_Chr7g0261971 63.037 1442 511 5 5 1424 7 1448 0.0 1906
Msa0124120 MtrunA17_Chr7g0261981 61.544 1425 516 5 5 1424 11 1408 0.0 1891
Msa0124120 MtrunA17_Chr7g0262221 60.941 1467 488 9 4 1424 11 1438 0.0 1875
Msa0124120 MtrunA17_Chr7g0262261 59.901 1419 522 4 21 1424 2 1388 0.0 1777
Msa0124120 MtrunA17_Chr7g0262261 51.111 90 41 1 1338 1424 1535 1624 6.19e-24 110
Msa0124120 MtrunA17_Chr7g0265981 59.692 1429 548 8 15 1424 38 1457 0.0 1768
Msa0124120 MtrunA17_Chr1g0171351 58.479 1433 568 10 18 1424 37 1468 0.0 1753
Msa0124120 MtrunA17_Chr4g0004021 67.169 1261 399 5 1 1256 15 1265 0.0 1748
Msa0124120 MtrunA17_Chr4g0004021 22.468 632 412 19 849 1420 166 779 6.28e-31 132
Msa0124120 MtrunA17_Chr7g0265971 58.125 1440 565 8 15 1424 32 1463 0.0 1747
Msa0124120 MtrunA17_Chr7g0262251 58.840 1414 510 8 15 1407 35 1397 0.0 1743
Msa0124120 MtrunA17_Chr1g0198291 57.123 1425 588 7 18 1424 49 1468 0.0 1717
Msa0124120 MtrunA17_Chr4g0062871 55.922 1427 605 7 11 1424 3 1418 0.0 1662
Msa0124120 MtrunA17_Chr2g0331081 55.338 1433 612 5 20 1424 34 1466 0.0 1638
Msa0124120 MtrunA17_Chr8g0340651 54.207 1450 616 9 20 1424 34 1480 0.0 1610
Msa0124120 MtrunA17_Chr7g0265961 55.021 1434 559 7 4 1424 28 1388 0.0 1602
Msa0124120 MtrunA17_Chr0c20g0493841 52.186 1418 650 10 23 1424 26 1431 0.0 1506
Msa0124120 MtrunA17_Chr3g0104621 52.039 1349 623 5 99 1424 1 1348 0.0 1419
Msa0124120 MtrunA17_Chr5g0429871 53.140 1242 559 6 193 1424 17 1245 0.0 1367
Msa0124120 MtrunA17_Chr5g0429871 22.261 566 379 13 149 702 662 1178 1.73e-29 128
Msa0124120 MtrunA17_Chr7g0262321 56.503 1184 445 11 255 1424 4 1131 0.0 1309
Msa0124120 MtrunA17_Chr7g0262321 23.550 569 362 16 150 705 564 1072 1.84e-24 111
Msa0124120 MtrunA17_Chr4g0069211 51.582 1043 462 11 23 1049 26 1041 0.0 1046
Msa0124120 MtrunA17_Chr4g0069211 23.520 625 393 21 849 1416 162 758 1.63e-33 140
Msa0124120 MtrunA17_Chr7g0266001 59.016 671 268 2 97 762 6 674 0.0 845
Msa0124120 MtrunA17_Chr7g0266001 24.960 629 397 19 852 1420 61 674 7.94e-37 149
Msa0124120 MtrunA17_Chr7g0265991 60.248 644 236 3 801 1424 1 644 0.0 822
Msa0124120 MtrunA17_Chr7g0265991 23.648 647 408 18 149 766 54 643 2.53e-36 147
Msa0124120 MtrunA17_Chr7g0215001 63.564 376 115 1 1002 1355 1 376 1.89e-173 521
Msa0124120 MtrunA17_Chr7g0215001 21.696 401 245 15 334 691 1 375 2.14e-12 70.9
Msa0124120 MtrunA17_Chr4g0069221 50.000 376 185 1 1052 1424 1 376 2.88e-132 412
Msa0124120 MtrunA17_Chr4g0069221 20.732 328 235 7 386 703 3 315 6.94e-11 65.9
Msa0124120 MtrunA17_Chr6g0472481 72.874 247 55 1 842 1076 1 247 7.68e-118 369
Msa0124120 MtrunA17_Chr6g0472481 27.698 278 141 9 149 404 8 247 1.21e-15 79.0
Msa0124120 MtrunA17_Chr4g0004001 62.069 174 65 1 1252 1424 15 188 2.35e-75 248
Msa0124120 MtrunA17_Chr7g0238421 48.846 260 92 4 862 1121 12 230 2.26e-66 224
Msa0124120 MtrunA17_Chr1g0176441 28.356 596 365 15 821 1380 143 712 2.71e-60 222
Msa0124120 MtrunA17_Chr1g0176441 25.184 544 344 14 154 675 171 673 7.30e-37 150
Msa0124120 MtrunA17_Chr1g0198931 28.893 578 367 15 819 1369 66 626 1.71e-58 215
Msa0124120 MtrunA17_Chr1g0198931 26.943 579 335 22 154 702 107 627 4.84e-39 156
Msa0124120 MtrunA17_Chr1g0176451 27.911 584 366 15 827 1381 1 558 2.28e-57 209
Msa0124120 MtrunA17_Chr1g0176451 26.022 538 340 12 154 675 23 518 2.21e-39 155
Msa0124120 MtrunA17_Chr2g0316301 28.807 545 353 12 854 1384 73 596 3.51e-56 207
Msa0124120 MtrunA17_Chr2g0316301 24.800 625 373 17 154 753 73 625 1.29e-37 151
Msa0124120 MtrunA17_Chr7g0262331 48.804 209 100 5 23 226 2 208 1.43e-54 189
Msa0124120 MtrunA17_Chr1g0208391 26.280 586 383 12 801 1366 50 606 6.85e-53 199
Msa0124120 MtrunA17_Chr1g0208391 26.655 574 355 15 147 705 86 608 2.86e-40 160
Msa0124120 MtrunA17_Chr4g0050221 28.864 537 348 12 849 1366 26 547 4.51e-52 195
Msa0124120 MtrunA17_Chr4g0050221 23.256 688 430 20 141 803 17 631 1.68e-34 141
Msa0124120 MtrunA17_Chr7g0267971 27.922 616 393 16 797 1380 105 701 1.72e-51 195
Msa0124120 MtrunA17_Chr7g0267971 24.917 606 360 22 109 675 113 662 6.05e-32 134
Msa0124120 MtrunA17_Chr1g0213091 24.477 621 398 14 816 1379 65 671 4.81e-51 194
Msa0124120 MtrunA17_Chr1g0213091 22.727 594 358 11 154 703 122 658 3.28e-36 148
Msa0124120 MtrunA17_Chr7g0263351 25.862 580 385 9 824 1366 82 653 1.21e-50 192
Msa0124120 MtrunA17_Chr7g0263351 23.169 669 418 15 145 760 118 743 4.06e-34 141
Msa0124120 MtrunA17_Chr8g0390471 80.808 99 19 0 854 952 5 103 1.69e-50 174
Msa0124120 MtrunA17_Chr1g0200651 27.273 495 305 10 824 1280 44 521 2.84e-50 190
Msa0124120 MtrunA17_Chr1g0200651 25.697 646 412 20 137 762 66 663 5.96e-38 152
Msa0124120 MtrunA17_Chr4g0050251 26.316 551 370 12 854 1383 73 608 5.98e-50 189
Msa0124120 MtrunA17_Chr4g0050251 24.919 618 401 15 154 754 73 644 3.48e-41 163
Msa0124120 MtrunA17_Chr5g0408061 29.485 485 284 15 824 1280 44 498 8.05e-50 188
Msa0124120 MtrunA17_Chr5g0408061 27.143 560 328 17 149 684 60 563 6.53e-40 158
Msa0124120 MtrunA17_Chr8g0359931 28.007 557 373 11 824 1369 34 573 9.08e-50 188
Msa0124120 MtrunA17_Chr8g0359931 27.920 548 316 21 154 684 66 551 9.90e-41 160
Msa0124120 MtrunA17_Chr4g0039261 28.115 626 390 18 154 760 51 635 4.99e-49 187
Msa0124120 MtrunA17_Chr4g0039261 26.612 605 382 17 853 1414 50 635 5.48e-47 181
Msa0124120 MtrunA17_Chr4g0039251 28.832 548 325 14 853 1360 92 614 1.59e-48 186
Msa0124120 MtrunA17_Chr4g0039251 26.998 663 402 25 148 779 89 700 2.74e-43 170
Msa0124120 MtrunA17_Chr6g0477811 27.387 555 344 15 853 1373 65 594 2.04e-47 182
Msa0124120 MtrunA17_Chr6g0477811 27.160 486 298 13 153 623 65 509 5.25e-44 172
Msa0124120 MtrunA17_Chr3g0102731 27.239 547 350 13 824 1336 54 586 8.14e-47 178
Msa0124120 MtrunA17_Chr3g0102731 31.387 274 151 7 153 425 97 334 1.80e-30 129
Msa0124120 MtrunA17_Chr5g0446901 26.667 555 354 14 821 1336 61 601 1.66e-46 177
Msa0124120 MtrunA17_Chr5g0446901 30.797 276 152 8 154 425 109 349 3.34e-29 125
Msa0124120 MtrunA17_Chr4g0050261 24.407 590 373 16 854 1383 73 649 2.00e-45 177
Msa0124120 MtrunA17_Chr4g0050261 24.394 660 401 21 154 758 73 689 4.64e-37 150
Msa0124120 MtrunA17_Chr4g0050291 25.767 652 406 22 803 1411 10 626 4.52e-45 174
Msa0124120 MtrunA17_Chr4g0050291 26.045 622 391 15 154 754 50 623 6.94e-45 174
Msa0124120 MtrunA17_Chr1g0202431 26.667 525 344 17 854 1367 50 544 9.80e-45 172
Msa0124120 MtrunA17_Chr1g0202431 23.511 638 404 16 140 758 29 601 5.47e-37 149
Msa0124120 MtrunA17_Chr2g0318061 35.231 281 164 7 825 1100 1 268 5.59e-44 164
Msa0124120 MtrunA17_Chr2g0318061 35.165 273 140 9 154 425 31 267 2.03e-36 142
Msa0124120 MtrunA17_Chr1g0199471 27.447 470 274 12 853 1274 516 966 8.89e-44 174
Msa0124120 MtrunA17_Chr1g0199471 32.103 271 144 9 153 419 516 750 1.57e-29 128
Msa0124120 MtrunA17_Chr7g0264441 26.064 564 340 14 853 1365 278 815 9.81e-44 172
Msa0124120 MtrunA17_Chr7g0264441 30.584 291 165 8 135 423 261 516 1.24e-28 124
Msa0124120 MtrunA17_Chr8g0384391 23.590 585 393 15 821 1374 25 586 7.33e-43 167
Msa0124120 MtrunA17_Chr8g0384391 22.866 656 383 16 153 760 55 635 3.33e-40 159
Msa0124120 MtrunA17_Chr4g0065231 25.405 555 379 14 827 1366 44 578 5.77e-42 164
Msa0124120 MtrunA17_Chr4g0065231 23.148 648 420 17 126 753 40 629 1.28e-39 157
Msa0124120 MtrunA17_Chr1g0180971 36.437 247 151 3 851 1097 410 650 1.16e-41 165
Msa0124120 MtrunA17_Chr1g0180971 31.522 276 153 8 150 423 409 650 7.00e-29 125
Msa0124120 MtrunA17_Chr5g0411621 35.507 276 159 6 827 1097 25 286 1.49e-40 161
Msa0124120 MtrunA17_Chr5g0411621 27.723 303 178 5 149 451 46 307 2.85e-28 123
Msa0124120 MtrunA17_Chr3g0130331 24.503 604 398 18 803 1374 9 586 2.57e-40 159
Msa0124120 MtrunA17_Chr3g0130331 22.188 640 405 13 153 760 57 635 8.27e-37 149
Msa0124120 MtrunA17_Chr4g0028621 26.471 476 284 9 853 1274 506 969 4.87e-40 162
Msa0124120 MtrunA17_Chr4g0028621 31.159 276 154 7 150 423 503 744 7.04e-24 109
Msa0124120 MtrunA17_Chr8g0393191 33.451 284 179 5 827 1109 43 317 5.03e-39 157
Msa0124120 MtrunA17_Chr8g0393191 27.402 281 171 5 149 429 64 311 1.38e-25 114
Msa0124120 MtrunA17_Chr8g0393191 22.174 230 163 6 1145 1369 518 736 2.41e-12 72.0
Msa0124120 MtrunA17_Chr5g0429861 47.917 144 74 1 52 194 66 209 7.66e-38 143
Msa0124120 MtrunA17_Chr4g0050201 26.477 491 326 14 896 1366 5 480 4.74e-37 148
Msa0124120 MtrunA17_Chr4g0050201 24.370 595 350 22 193 754 1 528 4.05e-23 105
Msa0124120 MtrunA17_Chr4g0026731 23.852 566 370 17 896 1411 22 576 5.96e-36 145
Msa0124120 MtrunA17_Chr4g0026731 25.415 602 375 18 187 754 12 573 3.55e-34 140
Msa0124120 MtrunA17_Chr4g0039231 25.000 604 328 19 915 1418 20 598 7.73e-32 133
Msa0124120 MtrunA17_Chr4g0039231 33.617 235 119 7 196 428 2 201 2.30e-28 122
Msa0124120 MtrunA17_Chr2g0327241 22.847 569 367 18 837 1366 111 646 6.02e-28 122
Msa0124120 MtrunA17_Chr8g0390461 38.776 147 78 4 683 824 2 141 9.20e-27 108
Msa0124120 MtrunA17_Chr8g0390481 85.714 56 7 1 984 1038 7 62 1.67e-24 98.2
Msa0124120 MtrunA17_Chr3g0093331 33.871 186 119 4 873 1055 17 201 5.38e-22 97.4
Msa0124120 MtrunA17_Chr3g0093331 27.200 250 149 3 175 423 19 236 1.18e-21 96.3
Msa0124120 MtrunA17_Chr8g0390451 53.125 64 30 0 229 292 23 86 8.12e-16 74.3
Msa0124120 MtrunA17_Chr7g0266011 44.330 97 47 2 15 104 38 134 6.03e-15 73.2
Msa0124120 MtrunA17_Chr7g0238411 37.500 88 44 2 587 674 27 103 4.11e-14 70.1
Msa0124120 MtrunA17_Chr4g0047831 40.244 82 49 0 971 1052 1 82 2.28e-12 64.7
Msa0124120 MtrunA17_Chr7g0261961 60.417 48 19 0 1377 1424 23 70 4.07e-12 63.2
Msa0124120 MtrunA17_Chr3g0132711 29.474 190 111 7 855 1036 210 384 1.24e-11 69.3
Msa0124120 MtrunA17_Chr7g0257341 27.044 318 187 17 737 1037 1366 1655 2.19e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124120 AT1G15520.1 63.910 1427 493 6 3 1424 14 1423 0.0 1942
Msa0124120 AT1G66950.1 57.825 1425 570 7 15 1424 46 1454 0.0 1754
Msa0124120 AT2G36380.1 57.795 1424 573 6 15 1424 44 1453 0.0 1743
Msa0124120 AT1G15520.2 64.706 1258 423 5 3 1256 14 1254 0.0 1719
Msa0124120 AT1G15520.2 22.821 631 411 19 849 1420 164 777 2.67e-33 141
Msa0124120 AT2G26910.1 56.421 1425 603 6 11 1424 3 1420 0.0 1686
Msa0124120 AT1G15210.1 55.856 1443 599 8 1 1424 19 1442 0.0 1647
Msa0124120 AT3G16340.1 55.070 1420 607 5 11 1424 22 1416 0.0 1646
Msa0124120 AT1G59870.1 55.841 1438 605 9 15 1424 34 1469 0.0 1640
Msa0124120 AT3G16340.2 54.789 1420 606 6 11 1424 22 1411 0.0 1630
Msa0124120 AT3G30842.1 53.885 1403 626 7 28 1424 31 1418 0.0 1596
Msa0124120 AT2G29940.1 53.066 1419 625 7 23 1424 32 1426 0.0 1567
Msa0124120 AT3G53480.1 50.390 1411 678 8 23 1424 53 1450 0.0 1483
Msa0124120 AT2G37280.1 50.426 1410 676 9 23 1424 19 1413 0.0 1468
Msa0124120 AT2G37280.3 49.409 1439 676 10 23 1424 19 1442 0.0 1453
Msa0124120 AT4G15215.11 48.117 1407 690 11 24 1424 25 1397 0.0 1390
Msa0124120 AT4G15215.9 48.117 1407 690 11 24 1424 22 1394 0.0 1389
Msa0124120 AT4G15215.4 48.117 1407 690 11 24 1424 22 1394 0.0 1389
Msa0124120 AT4G15215.5 48.117 1407 690 11 24 1424 22 1394 0.0 1389
Msa0124120 AT4G15215.3 48.117 1407 690 11 24 1424 22 1394 0.0 1389
Msa0124120 AT4G15215.2 48.117 1407 690 11 24 1424 22 1394 0.0 1389
Msa0124120 AT2G37280.2 51.136 1320 625 8 23 1337 19 1323 0.0 1389
Msa0124120 AT2G37280.2 25.172 580 362 17 842 1366 140 702 4.05e-39 160
Msa0124120 AT2G37280.2 24.449 544 340 13 149 675 835 1324 5.78e-30 130
Msa0124120 AT4G15230.3 48.093 1416 693 12 17 1424 19 1400 0.0 1384
Msa0124120 AT4G15230.1 48.093 1416 693 12 17 1424 19 1400 0.0 1384
Msa0124120 AT2G37280.4 51.743 1262 592 5 166 1424 8 1255 0.0 1382
Msa0124120 AT2G37280.4 24.602 565 355 13 149 696 677 1187 2.97e-35 147
Msa0124120 AT4G15236.1 47.909 1411 685 10 23 1424 21 1390 0.0 1376
Msa0124120 AT4G15233.1 48.125 1413 681 11 23 1424 21 1392 0.0 1375
Msa0124120 AT4G15215.1 47.761 1407 688 12 24 1424 25 1390 0.0 1371
Msa0124120 AT4G15215.8 47.761 1407 688 12 24 1424 22 1387 0.0 1371
Msa0124120 AT4G15215.10 47.761 1407 688 12 24 1424 22 1387 0.0 1371
Msa0124120 AT4G15215.6 47.761 1407 688 12 24 1424 22 1387 0.0 1371
Msa0124120 AT4G15215.7 47.761 1407 688 12 24 1424 22 1387 0.0 1371
Msa0124120 AT4G15233.3 48.793 1367 655 9 62 1424 5 1330 0.0 1367
Msa0124120 AT4G15233.6 48.793 1367 655 9 62 1424 5 1330 0.0 1367
Msa0124120 AT4G15230.4 49.040 1354 652 10 75 1424 2 1321 0.0 1366
Msa0124120 AT4G15233.8 47.488 1413 681 12 23 1424 21 1383 0.0 1350
Msa0124120 AT4G15233.7 47.488 1413 672 12 23 1424 21 1374 0.0 1347
Msa0124120 AT4G15233.2 47.930 1377 644 11 23 1367 21 1356 0.0 1326
Msa0124120 AT4G15230.2 48.762 1333 643 12 17 1343 19 1317 0.0 1312
Msa0124120 AT4G15230.2 24.825 572 358 18 849 1366 151 704 5.37e-35 146
Msa0124120 AT4G15233.5 46.648 701 348 6 62 761 5 680 0.0 659
Msa0124120 AT4G15233.5 53.403 573 264 1 855 1424 677 1249 0.0 652
Msa0124120 AT4G15233.5 23.741 556 357 14 163 703 685 1188 2.30e-37 154
Msa0124120 AT4G15233.5 23.775 551 368 14 851 1366 90 623 5.19e-33 140
Msa0124120 AT4G15233.4 46.648 701 348 6 62 761 5 680 0.0 659
Msa0124120 AT4G15233.4 53.403 573 264 1 855 1424 677 1249 0.0 652
Msa0124120 AT4G15233.4 23.741 556 357 14 163 703 685 1188 2.30e-37 154
Msa0124120 AT4G15233.4 23.775 551 368 14 851 1366 90 623 5.19e-33 140
Msa0124120 AT3G25620.2 29.549 599 374 17 798 1366 37 617 1.02e-58 216
Msa0124120 AT3G25620.2 28.729 543 324 15 148 673 93 589 4.72e-45 175
Msa0124120 AT3G55100.1 24.486 584 398 9 820 1379 15 579 1.29e-57 213
Msa0124120 AT3G55100.1 22.813 583 364 13 147 703 44 566 2.04e-35 145
Msa0124120 AT3G55100.2 24.486 584 398 9 820 1379 15 579 1.29e-57 213
Msa0124120 AT3G55100.2 22.813 583 364 13 147 703 44 566 2.04e-35 145
Msa0124120 AT2G01320.2 27.094 561 362 11 854 1388 90 629 3.91e-56 209
Msa0124120 AT2G01320.2 27.797 572 351 14 147 705 83 605 2.12e-43 171
Msa0124120 AT5G06530.2 27.646 633 388 15 802 1390 131 737 4.01e-56 210
Msa0124120 AT5G06530.2 26.134 551 338 18 153 678 178 684 7.17e-37 150
Msa0124120 AT5G06530.1 27.646 633 388 15 802 1390 131 737 4.01e-56 210
Msa0124120 AT5G06530.1 26.134 551 338 18 153 678 178 684 7.17e-37 150
Msa0124120 AT2G01320.3 27.094 561 362 11 854 1388 90 629 4.19e-56 209
Msa0124120 AT2G01320.3 27.797 572 351 14 147 705 83 605 2.14e-43 171
Msa0124120 AT2G01320.1 27.094 561 362 11 854 1388 90 629 4.78e-56 209
Msa0124120 AT2G01320.1 27.797 572 351 14 147 705 83 605 2.80e-43 170
Msa0124120 AT2G01320.4 27.094 561 362 11 854 1388 90 629 4.78e-56 209
Msa0124120 AT2G01320.4 27.797 572 351 14 147 705 83 605 2.80e-43 170
Msa0124120 AT2G01320.8 27.256 554 354 12 854 1379 90 622 1.21e-55 206
Msa0124120 AT2G01320.8 28.147 572 349 14 147 705 83 605 4.03e-44 172
Msa0124120 AT2G01320.5 27.256 554 354 12 854 1379 90 622 1.21e-55 206
Msa0124120 AT2G01320.5 28.147 572 349 14 147 705 83 605 4.03e-44 172
Msa0124120 AT3G55130.1 25.371 607 397 13 824 1398 70 652 1.55e-54 204
Msa0124120 AT3G55130.1 23.015 617 405 16 111 703 59 629 1.28e-33 140
Msa0124120 AT2G37360.1 26.655 574 381 9 824 1366 95 659 4.31e-54 204
Msa0124120 AT2G37360.1 23.665 562 382 10 154 703 133 659 4.12e-38 154
Msa0124120 AT3G55090.1 23.721 645 415 13 799 1395 45 660 7.58e-54 202
Msa0124120 AT3G55090.1 22.585 673 401 14 154 758 107 727 1.53e-34 143
Msa0124120 AT5G06530.3 28.866 582 340 15 802 1339 131 682 9.71e-54 201
Msa0124120 AT5G06530.3 26.079 556 342 18 153 683 178 689 1.37e-36 149
Msa0124120 AT4G27420.1 27.273 616 407 19 823 1419 33 626 1.27e-53 200
Msa0124120 AT4G27420.1 29.189 555 327 17 154 692 66 570 8.29e-42 164
Msa0124120 AT5G13580.1 25.169 592 395 11 824 1379 65 644 3.79e-52 197
Msa0124120 AT5G13580.1 24.735 566 378 10 149 703 103 631 8.97e-32 134
Msa0124120 AT3G55110.1 23.810 609 403 14 824 1401 60 638 6.18e-51 193
Msa0124120 AT3G55110.1 24.911 562 370 13 154 703 91 612 3.39e-38 154
Msa0124120 AT1G53270.1 26.679 536 328 10 854 1366 50 543 3.18e-50 189
Msa0124120 AT1G53270.1 23.037 573 371 10 140 705 36 545 2.37e-32 135
Msa0124120 AT2G39350.1 23.636 605 402 10 824 1379 64 657 6.42e-50 191
Msa0124120 AT2G39350.1 23.196 582 380 12 148 703 104 644 1.15e-32 137
Msa0124120 AT2G01320.7 29.295 454 278 10 854 1285 90 522 8.55e-50 186
Msa0124120 AT2G01320.7 37.413 286 134 8 147 425 83 330 9.33e-39 153
Msa0124120 AT2G01320.6 29.295 454 278 10 854 1285 90 522 8.55e-50 186
Msa0124120 AT2G01320.6 37.413 286 134 8 147 425 83 330 9.33e-39 153
Msa0124120 AT3G21090.1 27.152 604 388 15 853 1418 44 633 1.47e-49 189
Msa0124120 AT3G21090.1 26.140 658 419 17 144 780 33 644 1.97e-48 185
Msa0124120 AT3G13220.1 25.812 585 375 14 824 1369 62 626 4.45e-49 187
Msa0124120 AT3G13220.1 24.132 605 392 17 104 694 63 614 6.50e-32 134
Msa0124120 AT3G25620.1 32.783 424 244 14 798 1191 37 449 5.23e-49 182
Msa0124120 AT3G25620.1 36.502 263 130 7 148 409 93 319 2.93e-39 153
Msa0124120 AT1G17840.1 28.028 578 355 17 827 1373 50 597 6.87e-49 187
Msa0124120 AT1G17840.1 26.882 558 344 16 153 693 68 578 1.99e-46 179
Msa0124120 AT1G71960.1 29.569 487 294 13 824 1277 37 507 8.19e-49 186
Msa0124120 AT1G71960.1 25.633 632 389 20 154 762 83 656 1.86e-38 154
Msa0124120 AT1G31770.1 27.686 484 318 12 813 1280 39 506 1.37e-48 185
Msa0124120 AT1G31770.1 26.776 549 334 17 150 684 77 571 7.01e-40 159
Msa0124120 AT3G53510.1 25.177 564 386 9 854 1401 126 669 6.53e-48 184
Msa0124120 AT3G53510.1 23.675 566 368 11 154 703 126 643 7.57e-32 135
Msa0124120 AT2G13610.1 25.859 553 359 15 853 1376 61 591 1.08e-47 182
Msa0124120 AT2G13610.1 22.257 638 391 14 153 753 61 630 1.09e-37 152
Msa0124120 AT5G06530.4 27.470 506 311 10 871 1339 1 487 1.16e-46 176
Msa0124120 AT5G06530.4 26.119 536 331 17 171 683 1 494 2.36e-34 139
Msa0124120 AT1G53390.1 28.056 499 279 17 825 1274 505 972 1.84e-46 183
Msa0124120 AT1G53390.1 31.022 274 151 8 153 423 522 760 4.53e-27 120
Msa0124120 AT4G25750.1 26.742 531 328 19 854 1369 30 514 7.65e-46 176
Msa0124120 AT4G25750.1 25.000 628 359 16 154 758 30 568 4.33e-34 140
Msa0124120 AT1G51500.1 26.446 605 393 18 853 1418 43 634 3.07e-45 176
Msa0124120 AT1G51500.1 25.223 674 426 16 144 795 32 649 5.81e-45 175
Msa0124120 AT5G52860.1 26.296 521 335 14 854 1367 44 522 8.40e-45 172
Msa0124120 AT5G52860.1 23.425 619 394 13 146 758 36 580 2.90e-33 137
Msa0124120 AT1G51460.1 28.494 551 333 16 853 1360 29 561 1.20e-41 164
Msa0124120 AT1G51460.1 26.498 634 384 18 154 750 30 618 3.78e-40 160
Msa0124120 AT2G37010.2 26.032 557 341 15 853 1365 499 1028 4.33e-41 166
Msa0124120 AT2G37010.2 30.627 271 152 6 150 418 496 732 3.09e-30 130
Msa0124120 AT2G37010.1 26.032 557 341 15 853 1365 499 1028 4.33e-41 166
Msa0124120 AT2G37010.1 30.627 271 152 6 150 418 496 732 3.09e-30 130
Msa0124120 AT5G60740.1 27.721 487 259 13 853 1274 514 972 5.90e-38 155
Msa0124120 AT5G60740.1 31.408 277 152 8 150 423 511 752 5.45e-24 110
Msa0124120 AT5G19410.2 23.263 619 382 16 154 753 75 619 1.15e-35 145
Msa0124120 AT5G19410.2 25.092 542 365 14 854 1379 75 591 2.00e-35 145
Msa0124120 AT5G19410.1 23.263 619 382 16 154 753 66 610 1.27e-35 145
Msa0124120 AT5G19410.1 24.908 542 366 14 854 1379 66 582 2.30e-35 144
Msa0124120 AT2G28070.2 23.304 575 366 17 154 705 133 655 1.71e-27 120
Msa0124120 AT2G28070.2 21.860 613 422 18 780 1366 72 653 6.37e-25 112
Msa0124120 AT2G28070.1 23.304 575 366 17 154 705 133 655 1.71e-27 120
Msa0124120 AT2G28070.1 21.860 613 422 18 780 1366 72 653 6.37e-25 112

Find 289 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTTGGCCTGATATTT+TGG 0.064855 1_3:+51661096 Msa0124120:CDS
TCAAGGTACCTTCCAATATT+TGG 0.098023 1_3:-51658276 None:intergenic
TCAGCTGCTACTTCTGAAAT+TGG 0.136581 1_3:+51660456 Msa0124120:intron
TTGTCTTAAATTCACCTTCT+AGG 0.168766 1_3:-51655371 None:intergenic
GTCTGCGTTATTTCGGTTTA+TGG 0.198480 1_3:+51658422 Msa0124120:CDS
ACTACTTGCTGTTACTGTTT+TGG 0.202865 1_3:+51658494 Msa0124120:CDS
GAAAAGATCAATGGCAATAT+TGG 0.204895 1_3:+51657522 Msa0124120:CDS
CCCAATGTTTCATTGGAATT+AGG 0.212431 1_3:-51658929 None:intergenic
GTCTTGATCACAAAGAAATA+TGG 0.219145 1_3:+51657677 Msa0124120:CDS
GCAACTTCAATGATAGTTAT+TGG 0.226588 1_3:-51658213 None:intergenic
TATGCTGCTGTTACCTTCAT+AGG 0.240386 1_3:+51661278 Msa0124120:CDS
TCAAATAGTTCATAAGTTTC+TGG 0.245548 1_3:-51657261 None:intergenic
TGAAACAATTCAACTTAAAT+TGG 0.246957 1_3:+51654668 Msa0124120:CDS
TTATAACCATCTTTGATCTT+AGG 0.264625 1_3:-51660644 None:intergenic
TTGGTTCAAGCTGTTGTATA+TGG 0.273066 1_3:+51661904 Msa0124120:CDS
AGGAGTACTAACAGCTCTTA+TGG 0.273999 1_3:+51659732 Msa0124120:CDS
AGTATATGTAACTGTTTCTT+TGG 0.277915 1_3:-51655323 None:intergenic
GTCACTGTGGCAATGTTTAA+TGG 0.283352 1_3:+51658078 Msa0124120:CDS
GAGAGCAAAGGAGAAGAAAA+AGG 0.286394 1_3:+51654636 Msa0124120:CDS
GGAAACAACATTTATCATAT+TGG 0.292807 1_3:+51661021 Msa0124120:CDS
CATTAGAGGATGTGCATAAA+TGG 0.292953 1_3:+51658698 Msa0124120:intron
ATTGGCTTTGACCCAAATAT+TGG 0.293514 1_3:+51658264 Msa0124120:CDS
GTGATGAAACTTCAGAAATC+TGG 0.295358 1_3:+51656055 Msa0124120:intron
AGCTTTGATCTATATTCTTT+AGG 0.301479 1_3:+51662542 Msa0124120:three_prime_UTR
TCCCTCAAGCTTATTGGTAT+TGG 0.304856 1_3:+51658981 Msa0124120:CDS
GTTCTCTCAATTGCTACTAT+TGG 0.306445 1_3:-51661326 None:intergenic
CTAGTTGAGCGATCGACTTC+AGG 0.306760 1_3:-51659967 None:intergenic
TCCATGAACAACACCTTTAT+AGG 0.308923 1_3:-51657126 None:intergenic
AATGGTTTCTTTGGGGTTAT+TGG 0.309634 1_3:+51658716 Msa0124120:CDS
ATAGCTGTGAATGAATTTCT+TGG 0.311083 1_3:+51658769 Msa0124120:CDS
ATGTGCATAAATGGTTTCTT+TGG 0.311277 1_3:+51658707 Msa0124120:CDS
CAAGGTACCTTCCAATATTT+GGG 0.317610 1_3:-51658275 None:intergenic
GAAATATGGGATTAACAAAA+AGG 0.321861 1_3:+51657691 Msa0124120:CDS
TTCTTATACTATACATACTA+TGG 0.326457 1_3:+51662006 Msa0124120:CDS
CGCCAACGCCCCAAAATATC+AGG 0.328024 1_3:-51661106 None:intergenic
ACCTTCATAGGGGTTGTAAA+TGG 0.328796 1_3:+51661290 Msa0124120:CDS
CATTAATAATCACAGTAAAA+AGG 0.337646 1_3:+51661223 Msa0124120:intron
ACTTTGTTGTTGGCATTGGC+TGG 0.339174 1_3:+51655521 Msa0124120:CDS
AGATGGCGTCTGCGTTATTT+CGG 0.339586 1_3:+51658415 Msa0124120:CDS
TGTGCATAAATGGTTTCTTT+GGG 0.341235 1_3:+51658708 Msa0124120:CDS
TATCATTGAAGTTGCCATTT+GGG 0.342696 1_3:+51658221 Msa0124120:CDS
TATTGGTATTGGATTGGAAT+TGG 0.345237 1_3:+51658992 Msa0124120:CDS
AAAGGGTTGAAGAATTTGTT+AGG 0.345327 1_3:+51662371 Msa0124120:CDS
CCACCTCATTCTATGCAATA+TGG 0.349574 1_3:+51662079 Msa0124120:CDS
TTGACAGTGACAAAGTTATA+AGG 0.355019 1_3:-51657560 None:intergenic
TGTTCATGTTGTGTCCATAT+TGG 0.356943 1_3:-51662333 None:intergenic
ATTGTAGTGGCCAACACATT+TGG 0.361218 1_3:+51658462 Msa0124120:CDS
TCAAATCTAACTTCAATTGT+TGG 0.362763 1_3:-51655095 None:intergenic
ATGCCAGCAACATGTGGATT+TGG 0.364822 1_3:-51662051 None:intergenic
TTTCGGTTTATGGCAGCATT+AGG 0.365866 1_3:+51658432 Msa0124120:CDS
CATATACTTCAGAATGTTAG+TGG 0.366262 1_3:+51655338 Msa0124120:CDS
TTTAATTCTTACCTTCATAT+AGG 0.366791 1_3:-51656386 None:intergenic
TCATTAAGAGAAGCACTTGT+TGG 0.366983 1_3:+51660129 Msa0124120:CDS
CCTGTTGCATGGACCTTGAA+TGG 0.367493 1_3:+51662298 Msa0124120:CDS
ATGAGGTTCTTATTCATGTA+TGG 0.369697 1_3:-51662607 None:intergenic
ATTTCCAACATCCATGTTGC+AGG 0.370680 1_3:-51660668 None:intergenic
CGATACTCCCAATGTTTCAT+TGG 0.370803 1_3:-51658936 None:intergenic
TCTCTTTGCTTGTAAAAGAT+AGG 0.371953 1_3:-51658135 None:intergenic
CTGAGATACCTCTTATCATT+TGG 0.374285 1_3:-51656961 None:intergenic
CGATCTGATTGAGTACTTTG+AGG 0.374293 1_3:+51660522 Msa0124120:CDS
CTATCATTGAAGTTGCCATT+TGG 0.374934 1_3:+51658220 Msa0124120:CDS
GGATTGGTGACTTCCCAATA+TGG 0.375732 1_3:+51662319 Msa0124120:CDS
TATGGTGGAAATGGTACTAT+TGG 0.381479 1_3:+51662269 Msa0124120:CDS
CAAGATTTATTCAATGCAAT+GGG 0.382322 1_3:+51661248 Msa0124120:CDS
CTTCTTTGTGAATGTGATAG+AGG 0.382682 1_3:+51655178 Msa0124120:CDS
AAAAGATCAATGGCAATATT+GGG 0.384037 1_3:+51657523 Msa0124120:CDS
TTTGCACTTATCTTCACCTT+TGG 0.384316 1_3:+51662463 Msa0124120:CDS
AAAACATTCGCTCGCATATC+GGG 0.385641 1_3:+51659862 Msa0124120:CDS
CAGATATACGCTGGTCCAAT+AGG 0.385688 1_3:+51660487 Msa0124120:CDS
TTCATATAGGCATTAATATC+AGG 0.386369 1_3:-51656373 None:intergenic
TCGGAACAGTGGTCGCCTAT+TGG 0.387035 1_3:-51660502 None:intergenic
GTTCATGTTGTGTCCATATT+GGG 0.387495 1_3:-51662332 None:intergenic
TAGTACCATTTCCACCATAT+TGG 0.389489 1_3:-51662265 None:intergenic
TGTAACTGTTTCTTTGGACT+TGG 0.391954 1_3:-51655317 None:intergenic
AACAATTGAAGTTAGATTTG+AGG 0.398233 1_3:+51655097 Msa0124120:CDS
ATAATGACCGGTATATTGTT+TGG 0.398657 1_3:+51661083 Msa0124120:CDS
ACCTATAAAGGTGTTGTTCA+TGG 0.401163 1_3:+51657125 Msa0124120:CDS
ATATAAGCCGATGTTCTTTG+TGG 0.404356 1_3:-51656118 None:intergenic
GCTAGCAGTAGTGGAAGAAA+AGG 0.405961 1_3:+51659411 Msa0124120:CDS
CAAGCTTATTGGTATTGGAT+TGG 0.406340 1_3:+51658986 Msa0124120:CDS
GGTCATTGACTACATTCTTA+AGG 0.407138 1_3:+51656817 Msa0124120:CDS
GGATGAGATATCAAATGGTT+TGG 0.410386 1_3:+51657146 Msa0124120:CDS
TACCGGTCATTATAGTAAAT+AGG 0.410616 1_3:-51661073 None:intergenic
ATGCTGCTGTTACCTTCATA+GGG 0.412546 1_3:+51661279 Msa0124120:CDS
CACAATGTATAGCTTGTTTG+TGG 0.415149 1_3:+51661000 Msa0124120:CDS
GATTCATAAACTGTAACATT+AGG 0.416530 1_3:-51659913 None:intergenic
CATAGAACTTCCCCACATCT+TGG 0.416674 1_3:+51661885 Msa0124120:CDS
GATGTTTATTGAGGAAGTTA+TGG 0.419820 1_3:+51660089 Msa0124120:intron
CCATTCAAGGTCCATGCAAC+AGG 0.425055 1_3:-51662298 None:intergenic
AATACCTGTGCAAGAGCATA+TGG 0.427325 1_3:-51661392 None:intergenic
TGGTCGTCGCCATTGATGTA+TGG 0.428069 1_3:+51658736 Msa0124120:CDS
GAGAAGGAACACTAAGCTCT+TGG 0.428866 1_3:-51660926 None:intergenic
ACTCCAAATCCACATGTTGC+TGG 0.429832 1_3:+51662048 Msa0124120:CDS
AGTTCATAAGTTTCTGGTGC+TGG 0.431816 1_3:-51657255 None:intergenic
GAATACCAATATGGTGGAAA+TGG 0.431960 1_3:+51662260 Msa0124120:CDS
GGAGTACTAACAGCTCTTAT+GGG 0.432309 1_3:+51659733 Msa0124120:CDS
CCTAATTCCAATGAAACATT+GGG 0.432343 1_3:+51658929 Msa0124120:CDS
GAAGCACTTGTTGGATTGCC+AGG 0.432435 1_3:+51660138 Msa0124120:CDS
GAATCCATCGATAATATTCA+TGG 0.433230 1_3:+51660221 Msa0124120:CDS
TCTTGATCACAAAGAAATAT+GGG 0.435708 1_3:+51657678 Msa0124120:CDS
TTTGGGGCGTTGGCGCGAAA+AGG 0.437367 1_3:+51661114 Msa0124120:CDS
CTTATCTCAAGAGAAATTGC+AGG 0.439884 1_3:+51659201 Msa0124120:CDS
AATGACAGAGAATACCAATA+TGG 0.441967 1_3:+51662251 Msa0124120:intron
GACCACTTTGTTGTTGGCAT+TGG 0.447654 1_3:+51655517 Msa0124120:CDS
AACATGTGGATTTGGAGTTA+TGG 0.448272 1_3:-51662043 None:intergenic
CTGAGGGATAGAGGTTGAAA+AGG 0.449181 1_3:-51659444 None:intergenic
CAGCTGCTACTTCTGAAATT+GGG 0.452289 1_3:+51660457 Msa0124120:intron
ATTGGAATTGGAGCTTTGAT+TGG 0.452326 1_3:+51659004 Msa0124120:CDS
TGGTTCAAGCTGTTGTATAT+GGG 0.452429 1_3:+51661905 Msa0124120:CDS
GAATTTGTTAGGAATTACTT+TGG 0.453039 1_3:+51662382 Msa0124120:CDS
ATGCAGGAAGCAGCAATAGA+AGG 0.453401 1_3:+51656779 Msa0124120:intron
TTCATGGATGAGATATCAAA+TGG 0.455121 1_3:+51657141 Msa0124120:CDS
TGAAATTTAGACTTGTCAAA+TGG 0.457540 1_3:-51657647 None:intergenic
TGGAAAGACCACTTTGTTGT+TGG 0.462618 1_3:+51655511 Msa0124120:CDS
AGGAAAAGAGGCAAATCTTA+AGG 0.463908 1_3:+51660700 Msa0124120:CDS
TTGGCATTGGCTGGGAGACT+TGG 0.464122 1_3:+51655530 Msa0124120:CDS
TCCTAATTCCAATGAAACAT+TGG 0.465001 1_3:+51658928 Msa0124120:CDS
GAGACTTGGCAAAGATTTGA+AGG 0.466904 1_3:+51655544 Msa0124120:CDS
GTTCTCATATTCTCAATGTA+AGG 0.468030 1_3:+51662572 Msa0124120:three_prime_UTR
GTGGAATCATAAAGCCTAGA+AGG 0.470094 1_3:+51655357 Msa0124120:CDS
TTCTACAGAGAAAGAGCTGC+AGG 0.473026 1_3:+51661353 Msa0124120:CDS
AGGCATAATTCTTTCAGTAA+AGG 0.474024 1_3:+51662636 Msa0124120:three_prime_UTR
CAAGGGGTTGGACAAAATTA+CGG 0.475032 1_3:+51656208 Msa0124120:CDS
TCCAATACCAATAAGCTTGA+GGG 0.475720 1_3:-51658982 None:intergenic
ATAAGAGCTGTTAGTACTCC+TGG 0.476561 1_3:-51659730 None:intergenic
TCTTGGACATGGTTGGAGAA+AGG 0.478610 1_3:+51658786 Msa0124120:CDS
GTTGAAACTCAAGGAAAGAA+TGG 0.479559 1_3:+51654755 Msa0124120:CDS
TCTTTCGGGACACTTGAAAC+CGG 0.481243 1_3:-51657361 None:intergenic
GATGCTGGTTGGACCTATAA+AGG 0.482255 1_3:+51657113 Msa0124120:CDS
AAAACTAGTGGATATATTGA+AGG 0.485153 1_3:+51659805 Msa0124120:CDS
TTCAAGTGTCCCGAAAGAAA+AGG 0.493297 1_3:+51657366 Msa0124120:CDS
ATTGGATTTGTCCTGTTGCA+TGG 0.496066 1_3:+51662287 Msa0124120:CDS
TCAGCAAGATGTCAAGGGGT+TGG 0.499033 1_3:+51656196 Msa0124120:CDS
GCAAGATTTATTCAATGCAA+TGG 0.500297 1_3:+51661247 Msa0124120:CDS
CACACTTGACAATGGTCAAA+GGG 0.501753 1_3:+51662354 Msa0124120:CDS
GATCATAGTATATGCCATGA+TGG 0.503566 1_3:+51661927 Msa0124120:CDS
TTTCATGTAGGCAAACAACT+TGG 0.505508 1_3:+51657608 Msa0124120:CDS
TTAGGTGTAACTCACAGATA+AGG 0.505524 1_3:-51662127 None:intergenic
TGCATCTCTTACTACGCCAT+TGG 0.505723 1_3:+51658246 Msa0124120:CDS
CTTATGGGTATAAGTGGTGC+TGG 0.507028 1_3:+51659748 Msa0124120:CDS
CTGGGAGAGTAACATACAAT+GGG 0.508511 1_3:+51656074 Msa0124120:CDS
GTGGAAGCACAAGTTTATGT+TGG 0.509900 1_3:+51655128 Msa0124120:CDS
TTCATGGATGAACCAACCTC+TGG 0.510856 1_3:+51660237 Msa0124120:CDS
GTTGAAAGTCCACTCTCGCC+TGG 0.511181 1_3:-51660156 None:intergenic
AAAGTTCTTGTTGAAACTCA+AGG 0.512345 1_3:+51654746 Msa0124120:CDS
CAACAATTGCAACCACTCCT+AGG 0.513061 1_3:-51662420 None:intergenic
TGAATACTATAGGCTATTCA+AGG 0.513141 1_3:+51660617 Msa0124120:intron
GCTTTCTCAGCAAGATGTCA+AGG 0.513914 1_3:+51656190 Msa0124120:CDS
CTTTCTCAGCAAGATGTCAA+GGG 0.514037 1_3:+51656191 Msa0124120:CDS
TGATGAAACTTCAGAAATCT+GGG 0.514680 1_3:+51656056 Msa0124120:intron
CAAAAGTTCGAGACGATCCT+CGG 0.515276 1_3:-51659683 None:intergenic
GCGTCAAATATATCTATACT+TGG 0.516815 1_3:-51660348 None:intergenic
GAATAATGAAGCCTGAGAAA+AGG 0.516857 1_3:-51662104 None:intergenic
TAGGTGTAACTCACAGATAA+GGG 0.517022 1_3:-51662126 None:intergenic
TGAGATGCAGATGTTTATTG+AGG 0.517449 1_3:+51660080 Msa0124120:intron
CAAATGATAAGAGGTATCTC+AGG 0.517881 1_3:+51656962 Msa0124120:CDS
TCATCAAAACTGAGGGATAG+AGG 0.520684 1_3:-51659453 None:intergenic
TAGGCATTAATATCAGGATC+TGG 0.523122 1_3:-51656367 None:intergenic
ACCATTTACAACCCCTATGA+AGG 0.523911 1_3:-51661291 None:intergenic
GGAGGATTTGTTATTTCAAG+AGG 0.524012 1_3:+51658516 Msa0124120:CDS
CTTTGTTGTTGGCATTGGCT+GGG 0.526042 1_3:+51655522 Msa0124120:CDS
AACAACATTTATCATATTGG+AGG 0.526283 1_3:+51661024 Msa0124120:CDS
CTCCTATTTACTATAATGAC+CGG 0.528662 1_3:+51661071 Msa0124120:CDS
ATGTTGGAAATTACGTCAGC+AGG 0.528711 1_3:+51660680 Msa0124120:CDS
GTAGGAGACCAAATGATAAG+AGG 0.529332 1_3:+51656953 Msa0124120:CDS
AATCTTTGCTATATTCTGCA+TGG 0.531112 1_3:+51659932 Msa0124120:CDS
GGAAGTCACCAATCCATTCA+AGG 0.531272 1_3:-51662311 None:intergenic
TTGAGAAAACATCCATGCAA+TGG 0.531599 1_3:-51654527 None:intergenic
GTAAGAGATGCATTCCCAAA+TGG 0.532442 1_3:-51658235 None:intergenic
TAATCCTGCAACATGGATGT+TGG 0.532590 1_3:+51660664 Msa0124120:CDS
TTTAGACTTGTCAAATGGAT+CGG 0.532619 1_3:-51657642 None:intergenic
AGTCGATCGCTCAACTAGAA+AGG 0.533548 1_3:+51659972 Msa0124120:CDS
TGATATTAATGCCTATATGA+AGG 0.533717 1_3:+51656375 Msa0124120:CDS
TGACATCAAGAAAAGATCAA+TGG 0.534017 1_3:+51657513 Msa0124120:CDS
TGAGGATGCACAAACATACA+TGG 0.536386 1_3:+51658038 Msa0124120:CDS
TGCTGGAAAGACTACTCTAA+TGG 0.537176 1_3:+51659765 Msa0124120:CDS
AATGGTAGAGTGGTACATCT+TGG 0.538129 1_3:-51658016 None:intergenic
AATAAGAACCTCATGTAACT+AGG 0.538174 1_3:+51662616 Msa0124120:three_prime_UTR
ATATATCTATACTTGGCTGA+TGG 0.538406 1_3:-51660341 None:intergenic
GGTTTATGGCAGCATTAGGA+AGG 0.541213 1_3:+51658436 Msa0124120:CDS
GAAGGAAGCATCACAATAGC+CGG 0.541263 1_3:+51659823 Msa0124120:CDS
CACAGTACGTCCTGTGTCCA+CGG 0.541483 1_3:-51660307 None:intergenic
TCTATATTCTTTAGGAAACA+TGG 0.543078 1_3:+51662550 Msa0124120:three_prime_UTR
TTATAACTTTGTCACTGTCA+AGG 0.543634 1_3:+51657562 Msa0124120:CDS
CATGGGAGCACTATTCTTCA+CGG 0.543893 1_3:+51658056 Msa0124120:CDS
TGTCTTTGCAGCATTCAGAA+AGG 0.546428 1_3:+51659168 Msa0124120:intron
GGAGTTCCTAAGATCAAAGA+TGG 0.547330 1_3:+51660638 Msa0124120:CDS
GAAATTTAAACTCACTTGTG+TGG 0.549999 1_3:-51657786 None:intergenic
ACAAAGAAGTTAAATAATGT+AGG 0.550631 1_3:-51655164 None:intergenic
CAATGACCACACTGTTCTGA+TGG 0.551828 1_3:-51656802 None:intergenic
TAGATTTGAGGATATAAATG+TGG 0.553013 1_3:+51655109 Msa0124120:CDS
GAACAATTAAGCTAATTACT+AGG 0.554294 1_3:+51662658 Msa0124120:three_prime_UTR
ATCCAATACCAATAAGCTTG+AGG 0.556389 1_3:-51658983 None:intergenic
GATAATATGCCAGCAACATG+TGG 0.557494 1_3:-51662057 None:intergenic
TCTGGGAGAGTAACATACAA+TGG 0.558505 1_3:+51656073 Msa0124120:CDS
ATGAATTTCTTGGACATGGT+TGG 0.558558 1_3:+51658779 Msa0124120:CDS
TATCAGGCCAAACAATATAC+CGG 0.559518 1_3:-51661090 None:intergenic
CAAACAACTTGGAGAAGAGC+TGG 0.560436 1_3:+51657619 Msa0124120:CDS
TGCTACTTCTGAAATTGGGA+GGG 0.560556 1_3:+51660461 Msa0124120:CDS
GATGGACAAATTGTGTATCA+AGG 0.561608 1_3:+51657303 Msa0124120:CDS
TCATCCATGAATATTATCGA+TGG 0.562283 1_3:-51660225 None:intergenic
GAAAATTCTTACCTCATCAA+AGG 0.564517 1_3:-51660370 None:intergenic
GCTACTTCTGAAATTGGGAG+GGG 0.567895 1_3:+51660462 Msa0124120:CDS
ATCTGAACGTGAAGATGATG+AGG 0.569558 1_3:+51654551 Msa0124120:CDS
GTTGAATGCTTTGATACCAA+AGG 0.570906 1_3:-51662479 None:intergenic
GATATACTACTTCTCACTGA+TGG 0.570972 1_3:+51657285 Msa0124120:CDS
AATATTTGGGTCAAAGCCAA+TGG 0.571211 1_3:-51658262 None:intergenic
AATTACGTCAGCAGGAAAAG+AGG 0.571244 1_3:+51660688 Msa0124120:CDS
GTTGGATTGCCAGGCGAGAG+TGG 0.571903 1_3:+51660147 Msa0124120:CDS
ACGCCATCTGATTAATGCAT+AGG 0.575515 1_3:-51658401 None:intergenic
ACAGCTCTTATGGGTATAAG+TGG 0.575581 1_3:+51659742 Msa0124120:CDS
GCTTTGACCCAAATATTGGA+AGG 0.578074 1_3:+51658268 Msa0124120:CDS
GGGCTTATTCTCTTCCACCA+TGG 0.578746 1_3:+51658178 Msa0124120:CDS
ATCATAGTATATGCCATGAT+GGG 0.579894 1_3:+51661928 Msa0124120:CDS
ATATAGGGAGTGAAAAGTCA+AGG 0.580011 1_3:+51659655 Msa0124120:intron
TGAACATGACTTCCTAGGAG+TGG 0.581126 1_3:+51662408 Msa0124120:CDS
AAAGTGGTCTTTCCAGAACC+AGG 0.581937 1_3:-51655503 None:intergenic
AGGAGTGGTTGCAATTGTTG+TGG 0.583205 1_3:+51662423 Msa0124120:CDS
GCCTACATGAAATAATTCGA+AGG 0.584063 1_3:-51657597 None:intergenic
GTATGTTTGTGCATCCTCAA+TGG 0.585304 1_3:-51658034 None:intergenic
AGGGGTTGTAAATGGTGCCT+CGG 0.587490 1_3:+51661298 Msa0124120:CDS
ACACACTTGACAATGGTCAA+AGG 0.589771 1_3:+51662353 Msa0124120:CDS
TGCATGGACCTTGAATGGAT+TGG 0.590662 1_3:+51662303 Msa0124120:CDS
AACAGCTTGAACCAAGATGT+GGG 0.591715 1_3:-51661896 None:intergenic
AACATGGAAGAACCATTGCA+TGG 0.591910 1_3:+51654515 Msa0124120:CDS
TTTGATATCATCAAAACTGA+GGG 0.592217 1_3:-51659460 None:intergenic
CAGTAGTGGAAGAAAAGGAA+TGG 0.592511 1_3:+51659416 Msa0124120:CDS
AACTCAAGGAAAGAATGGAC+AGG 0.592934 1_3:+51654760 Msa0124120:CDS
AGTCAACATGATAATCACAT+TGG 0.593528 1_3:+51656142 Msa0124120:CDS
TGAACTGCTGAGAAAAGAGA+AGG 0.593745 1_3:+51656330 Msa0124120:CDS
GAAAACAAAGCTAGCAGTAG+TGG 0.595836 1_3:+51659402 Msa0124120:CDS
ACAAAGATGGATGAAGCAGT+TGG 0.595919 1_3:+51659378 Msa0124120:CDS
AGTCCTATGCATTAATCAGA+TGG 0.595979 1_3:+51658398 Msa0124120:CDS
TCTAAAGGACTCACTAGAAG+AGG 0.596533 1_3:-51659275 None:intergenic
GTGAATGAATTTCTTGGACA+TGG 0.598840 1_3:+51658775 Msa0124120:CDS
TATATTTGACGCCTTTGATG+AGG 0.599328 1_3:+51660359 Msa0124120:CDS
GCATTCAGAAAGGATCAAGC+AGG 0.599799 1_3:+51659178 Msa0124120:intron
GACAGAGAATACCAATATGG+TGG 0.601204 1_3:+51662254 Msa0124120:intron
ATTTGATATCATCAAAACTG+AGG 0.604736 1_3:-51659461 None:intergenic
TGTGAAGGTGAGATGCTGGT+TGG 0.605289 1_3:+51657102 Msa0124120:intron
CTGCTACTTCTGAAATTGGG+AGG 0.605948 1_3:+51660460 Msa0124120:CDS
TGTCCACTCAAATCCCATCA+TGG 0.607881 1_3:-51661941 None:intergenic
GTGCATAAATGGTTTCTTTG+GGG 0.608849 1_3:+51658709 Msa0124120:CDS
CTCAAAGTACTCAATCAGAT+CGG 0.609339 1_3:-51660521 None:intergenic
CAACAGCTTGAACCAAGATG+TGG 0.610125 1_3:-51661897 None:intergenic
GTTTATGGCAGCATTAGGAA+GGG 0.610521 1_3:+51658437 Msa0124120:CDS
GTTTGTTCCACAAAGAACAT+CGG 0.611403 1_3:+51656111 Msa0124120:CDS
TATGCCATATGCTCTTGCAC+AGG 0.612244 1_3:+51661388 Msa0124120:CDS
GCACCATATTGCATAGAATG+AGG 0.612531 1_3:-51662082 None:intergenic
GTAAGGAACACCGTGGACAC+AGG 0.613149 1_3:+51660297 Msa0124120:CDS
TGAAAATGTTCCAAATGTGT+TGG 0.615705 1_3:-51658472 None:intergenic
GGAAGAGAATAAGCCCATGA+AGG 0.624504 1_3:-51658171 None:intergenic
AGAGTAACATACAATGGGAA+AGG 0.625058 1_3:+51656079 Msa0124120:CDS
CCATATTGCATAGAATGAGG+TGG 0.626247 1_3:-51662079 None:intergenic
GTGCATCCTCAATGGTAGAG+TGG 0.630670 1_3:-51658026 None:intergenic
AGCCAATGCCAACAACAAAG+TGG 0.630766 1_3:-51655519 None:intergenic
ATATTCTGTTGACATGCCAC+AGG 0.634473 1_3:+51659482 Msa0124120:CDS
ATGGTTATAATCCTGCAACA+TGG 0.635121 1_3:+51660657 Msa0124120:CDS
AACATGAACACACTTGACAA+TGG 0.635524 1_3:+51662346 Msa0124120:CDS
GCCTTCGAATTATTTCATGT+AGG 0.635886 1_3:+51657596 Msa0124120:CDS
TGCTCTAGCATCAAGTCCAG+AGG 0.639684 1_3:-51660253 None:intergenic
CTAGCATCAAGTCCAGAGGT+TGG 0.639863 1_3:-51660249 None:intergenic
TTTCTCAGCAAGATGTCAAG+GGG 0.644020 1_3:+51656192 Msa0124120:CDS
ATTAGGAAGGGATATTGTAG+TGG 0.647301 1_3:+51658449 Msa0124120:CDS
GAATTATGCCTAGTTACATG+AGG 0.648356 1_3:-51662624 None:intergenic
ATACTATGGTATGATGACAA+TGG 0.651111 1_3:+51662020 Msa0124120:CDS
GGAGGGGAGCAGATATACGC+TGG 0.653420 1_3:+51660478 Msa0124120:CDS
ATGATAAGAGGTATCTCAGG+TGG 0.655391 1_3:+51656965 Msa0124120:CDS
GAGGATGCACAAACATACAT+GGG 0.658532 1_3:+51658039 Msa0124120:CDS
GATGTACCACTCTACCATTG+AGG 0.661008 1_3:+51658020 Msa0124120:CDS
ATATGATCAATTAAATGGAG+AGG 0.661770 1_3:+51654481 None:intergenic
CAATTGTAATGAGAACAGTA+AGG 0.662386 1_3:+51660280 Msa0124120:CDS
ATGCCATGATGGGATTTGAG+TGG 0.663142 1_3:+51661938 Msa0124120:CDS
GAAAAGTCAAGGAGTTTCCG+AGG 0.664009 1_3:+51659666 Msa0124120:CDS
TGATGTTTGTGCTGACACAA+TGG 0.669187 1_3:+51656931 Msa0124120:CDS
TGCTACTATTGGTTGTACCG+AGG 0.671410 1_3:-51661315 None:intergenic
TGCTGCTGTTACCTTCATAG+GGG 0.677062 1_3:+51661280 Msa0124120:CDS
AGAGGAGTGACACTAAAACA+TGG 0.682472 1_3:+51654499 Msa0124120:CDS
GTTTGTGCTGACACAATGGT+AGG 0.682652 1_3:+51656935 Msa0124120:CDS
CGTGGACACAGGACGTACTG+TGG 0.685468 1_3:+51660308 Msa0124120:CDS
ACTCAATCAGATCGGAACAG+TGG 0.688149 1_3:-51660513 None:intergenic
GTATCGATACTGAAATCTCG+CGG 0.706769 1_3:+51658953 Msa0124120:CDS
AAGATTTATTCAATGCAATG+GGG 0.709593 1_3:+51661249 Msa0124120:CDS
ACAGCTTGAACCAAGATGTG+GGG 0.710152 1_3:-51661895 None:intergenic
ACTATTCTTCACGGTCACTG+TGG 0.717636 1_3:+51658065 Msa0124120:CDS
GTTGAGCGATCGACTTCAGG+CGG 0.723649 1_3:-51659964 None:intergenic
GTGGTCTTTCCAGAACCAGG+TGG 0.751243 1_3:-51655500 None:intergenic
AGAAGGCCATCAGAACAGTG+TGG 0.758039 1_3:+51656796 Msa0124120:CDS
GAGAACAGTAAGGAACACCG+TGG 0.806802 1_3:+51660290 Msa0124120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACTATTTTTTGTTTTTTA+AGG + chr1_3:51655268-51655287 Msa0124120:intron 10.0%
!!! TACTATTTTTTGTTTTTTAA+GGG + chr1_3:51655269-51655288 Msa0124120:intron 10.0%
!!! TAAGAATTAAATAATCTTTT+TGG + chr1_3:51656398-51656417 Msa0124120:intron 10.0%
!! TAAAAACATTAAAAACAAAA+GGG - chr1_3:51658820-51658839 None:intergenic 10.0%
!! ATAAAAACATTAAAAACAAA+AGG - chr1_3:51658821-51658840 None:intergenic 10.0%
!! ACAAGAATTAATAATCAAAA+TGG - chr1_3:51654912-51654931 None:intergenic 15.0%
!! ATATTTCTTACTTTATTCAT+TGG + chr1_3:51655220-51655239 Msa0124120:intron 15.0%
!!! ACTATTTTTTGTTTTTTAAG+GGG + chr1_3:51655270-51655289 Msa0124120:intron 15.0%
!! GTAAATTCAAATTTAAACTA+TGG - chr1_3:51656012-51656031 None:intergenic 15.0%
!! AGATAATAACTAAATTAGAT+TGG + chr1_3:51656033-51656052 Msa0124120:intron 15.0%
!!! TAAGATTGGTTTAAAATATT+TGG - chr1_3:51656270-51656289 None:intergenic 15.0%
!!! ATTGTTTAAGTTTCAAATTA+AGG - chr1_3:51657059-51657078 None:intergenic 15.0%
!!! TGATTAATAATATTTTGTGA+AGG + chr1_3:51657087-51657106 Msa0124120:intron 15.0%
!!! CACTTTATTTAACATTTTTA+TGG - chr1_3:51657877-51657896 None:intergenic 15.0%
!! AAAAACATTAAAAACAAAAG+GGG - chr1_3:51658819-51658838 None:intergenic 15.0%
!! TAAATGATAAAAAAATCATG+TGG - chr1_3:51659142-51659161 None:intergenic 15.0%
!! ACAATACTAATTTACATAAA+TGG + chr1_3:51659573-51659592 Msa0124120:intron 15.0%
!! AATTTACATAAATGGAAATA+AGG + chr1_3:51659581-51659600 Msa0124120:intron 15.0%
!!! ACTGAAATTTAATATTTTGA+AGG + chr1_3:51660841-51660860 Msa0124120:intron 15.0%
!! TGATTATTAATGATATAACA+TGG - chr1_3:51661215-51661234 None:intergenic 15.0%
!! ATAACAATGAAAATGAATAA+TGG - chr1_3:51661425-51661444 None:intergenic 15.0%
!! ATCATATAATAGATGTTATT+AGG - chr1_3:51662161-51662180 None:intergenic 15.0%
!! TGAAACAATTCAACTTAAAT+TGG + chr1_3:51654668-51654687 Msa0124120:CDS 20.0%
!! ATTCTTGTTCAAAAAGATTA+TGG + chr1_3:51654924-51654943 Msa0124120:intron 20.0%
!! ACAAAGAAGTTAAATAATGT+AGG - chr1_3:51655167-51655186 None:intergenic 20.0%
!!! TAAGATTTTGAGATTTTTGT+AGG + chr1_3:51655459-51655478 Msa0124120:intron 20.0%
!! TTTAATTCTTACCTTCATAT+AGG - chr1_3:51656389-51656408 None:intergenic 20.0%
!! TTTCACAAGTTAACTATATT+TGG - chr1_3:51656859-51656878 None:intergenic 20.0%
!!! AATTTGAAACTTAAACAATG+AGG + chr1_3:51657060-51657079 Msa0124120:intron 20.0%
!!! CAAGAAACAATATTTTTCAA+AGG - chr1_3:51657441-51657460 None:intergenic 20.0%
!!! TTTCATATGATTTAGTTTCA+AGG - chr1_3:51658296-51658315 None:intergenic 20.0%
!! TAGTTGTTTATTTGTATTTG+AGG + chr1_3:51658591-51658610 Msa0124120:intron 20.0%
!! ATGTACTAGATAAGTAAAAA+TGG + chr1_3:51658614-51658633 Msa0124120:intron 20.0%
!! TAAGAAAGATTCAATACATT+AGG - chr1_3:51658659-51658678 None:intergenic 20.0%
!!! ATTTAATTTTCTCTTTGCAT+TGG + chr1_3:51659039-51659058 Msa0124120:CDS 20.0%
!! TCATCAAAATCATTATGTTA+TGG - chr1_3:51659348-51659367 None:intergenic 20.0%
!!! TGTCTATATGTTGATTATAT+AGG + chr1_3:51659639-51659658 Msa0124120:intron 20.0%
!!! GTCTATATGTTGATTATATA+GGG + chr1_3:51659640-51659659 Msa0124120:intron 20.0%
!!! TTTTCTTTGTTTCAAATTAG+AGG + chr1_3:51660003-51660022 Msa0124120:intron 20.0%
!! TGTAGTACTTAAAAACAAAA+TGG - chr1_3:51660401-51660420 None:intergenic 20.0%
!!! AAAATATGTGAGTTTTTACT+AGG - chr1_3:51660774-51660793 None:intergenic 20.0%
!!! ATATCTTTATTCTTTTGAAC+CGG + chr1_3:51660795-51660814 Msa0124120:intron 20.0%
!! AATTATTAAAACAGAAAGTC+CGG - chr1_3:51660817-51660836 None:intergenic 20.0%
!! CAAAATATTAAATTTCAGTG+AGG - chr1_3:51660840-51660859 None:intergenic 20.0%
!! ATTAATGATATAACATGGTA+AGG - chr1_3:51661210-51661229 None:intergenic 20.0%
!! CATTAATAATCACAGTAAAA+AGG + chr1_3:51661223-51661242 Msa0124120:intron 20.0%
!!! TTTTCTATTATGAAATGCAT+AGG + chr1_3:51661622-51661641 Msa0124120:intron 20.0%
!! TTTCTATTATGAAATGCATA+GGG + chr1_3:51661623-51661642 Msa0124120:intron 20.0%
!! AATGTTGCATTTAAATAATC+CGG + chr1_3:51661666-51661685 Msa0124120:intron 20.0%
!!! TTTTGTGTATTATTTATCGA+CGG - chr1_3:51661751-51661770 None:intergenic 20.0%
!! AATTGTTTATTATGAATTGC+AGG + chr1_3:51661858-51661877 Msa0124120:intron 20.0%
!! TTCTTATACTATACATACTA+TGG + chr1_3:51662006-51662025 Msa0124120:CDS 20.0%
!! ATAATAGATGTTATTAGGAA+AGG - chr1_3:51662156-51662175 None:intergenic 20.0%
! TGACCTTATAACTAACTTTA+AGG + chr1_3:51654985-51655004 Msa0124120:intron 25.0%
! GACCTTATAACTAACTTTAA+GGG + chr1_3:51654986-51655005 Msa0124120:intron 25.0%
! ATCCAATCTTAAAACAATTC+TGG - chr1_3:51655012-51655031 None:intergenic 25.0%
! TCAAATCTAACTTCAATTGT+TGG - chr1_3:51655098-51655117 None:intergenic 25.0%
! AACAATTGAAGTTAGATTTG+AGG + chr1_3:51655097-51655116 Msa0124120:CDS 25.0%
! TAGATTTGAGGATATAAATG+TGG + chr1_3:51655109-51655128 Msa0124120:CDS 25.0%
!! AGTATATGTAACTGTTTCTT+TGG - chr1_3:51655326-51655345 None:intergenic 25.0%
! ATTTGAAGGTAAAGAAACTA+AGG + chr1_3:51655558-51655577 Msa0124120:intron 25.0%
!! ACTAAGGTTTCAATCATTTT+AGG + chr1_3:51655574-51655593 Msa0124120:intron 25.0%
!! CTAAGGTTTCAATCATTTTA+GGG + chr1_3:51655575-51655594 Msa0124120:intron 25.0%
!! CAATGATTAGTTATAACCTA+TGG + chr1_3:51655644-51655663 Msa0124120:intron 25.0%
!!! TTTGGACATTGATTTGAAAT+TGG + chr1_3:51655796-51655815 Msa0124120:intron 25.0%
! TTCAAAACTCTGATTAAGAT+TGG - chr1_3:51656284-51656303 None:intergenic 25.0%
! TTCATATAGGCATTAATATC+AGG - chr1_3:51656376-51656395 None:intergenic 25.0%
! TGATATTAATGCCTATATGA+AGG + chr1_3:51656375-51656394 Msa0124120:CDS 25.0%
! TAGTATTTGTGAAACAGTTT+GGG + chr1_3:51656450-51656469 Msa0124120:intron 25.0%
! AAGGATTCAAAACATAGTTT+AGG - chr1_3:51656687-51656706 None:intergenic 25.0%
! TTGAATCCTTATGTTTGAAA+TGG + chr1_3:51656697-51656716 Msa0124120:intron 25.0%
!! TTAACTATATTTGGTGAATC+TGG - chr1_3:51656850-51656869 None:intergenic 25.0%
!!! TTAACTTGTGAAACAAGAAA+AGG + chr1_3:51656866-51656885 Msa0124120:intron 25.0%
! TCAAATAGTTCATAAGTTTC+TGG - chr1_3:51657264-51657283 None:intergenic 25.0%
!! AACTCAAGTACATTTTCTTT+TGG - chr1_3:51657330-51657349 None:intergenic 25.0%
! AAAAGATCAATGGCAATATT+GGG + chr1_3:51657523-51657542 Msa0124120:CDS 25.0%
! TGAAATTTAGACTTGTCAAA+TGG - chr1_3:51657650-51657669 None:intergenic 25.0%
! TCTTGATCACAAAGAAATAT+GGG + chr1_3:51657678-51657697 Msa0124120:CDS 25.0%
! GAAATATGGGATTAACAAAA+AGG + chr1_3:51657691-51657710 Msa0124120:CDS 25.0%
!! TGATAGTTATTGGTATTTTG+AGG - chr1_3:51658206-51658225 None:intergenic 25.0%
! TTATAGTGTAACTCTAAACT+TGG + chr1_3:51658546-51658565 Msa0124120:intron 25.0%
!!! ACATTGTTATTTTGCATTAG+AGG + chr1_3:51658684-51658703 Msa0124120:intron 25.0%
! TAGTTAAGAAATCTTCTGAT+AGG + chr1_3:51658840-51658859 Msa0124120:intron 25.0%
! TAAATTTCCTTGAATGTTAC+AGG + chr1_3:51658901-51658920 Msa0124120:intron 25.0%
! GATAAAAAAATCATGTGGTA+AGG - chr1_3:51659137-51659156 None:intergenic 25.0%
! TAAGTACATTAACTATGTCT+TGG - chr1_3:51659302-51659321 None:intergenic 25.0%
! TGAAAAATCAGATACAAAGA+TGG + chr1_3:51659365-51659384 Msa0124120:intron 25.0%
! TTTGATATCATCAAAACTGA+GGG - chr1_3:51659463-51659482 None:intergenic 25.0%
! ATTTGATATCATCAAAACTG+AGG - chr1_3:51659464-51659483 None:intergenic 25.0%
! TGTTGATATCTTAACTAGAA+AGG - chr1_3:51659510-51659529 None:intergenic 25.0%
! AACATATAGACAAAATGCTA+TGG - chr1_3:51659631-51659650 None:intergenic 25.0%
!! AAAACTAGTGGATATATTGA+AGG + chr1_3:51659805-51659824 Msa0124120:CDS 25.0%
! GATTCATAAACTGTAACATT+AGG - chr1_3:51659916-51659935 None:intergenic 25.0%
! TTATAACCATCTTTGATCTT+AGG - chr1_3:51660647-51660666 None:intergenic 25.0%
!!! ACTAGTATTTTCCATTTTTC+AGG + chr1_3:51660886-51660905 Msa0124120:intron 25.0%
!! TGTTTATTTCTCCTGAAAAA+TGG - chr1_3:51660900-51660919 None:intergenic 25.0%
! GGAAACAACATTTATCATAT+TGG + chr1_3:51661021-51661040 Msa0124120:CDS 25.0%
! AACAACATTTATCATATTGG+AGG + chr1_3:51661024-51661043 Msa0124120:CDS 25.0%
! CAAGATTTATTCAATGCAAT+GGG + chr1_3:51661248-51661267 Msa0124120:CDS 25.0%
! AAGATTTATTCAATGCAATG+GGG + chr1_3:51661249-51661268 Msa0124120:CDS 25.0%
! ATGAATCGTTAAGTAGATAT+TGG + chr1_3:51661462-51661481 Msa0124120:intron 25.0%
!!! GAATTTGTTAGGAATTACTT+TGG + chr1_3:51662382-51662401 Msa0124120:CDS 25.0%
!! AGCTTTGATCTATATTCTTT+AGG + chr1_3:51662542-51662561 Msa0124120:three_prime_UTR 25.0%
!! TCTATATTCTTTAGGAAACA+TGG + chr1_3:51662550-51662569 Msa0124120:three_prime_UTR 25.0%
! GAACAATTAAGCTAATTACT+AGG + chr1_3:51662658-51662677 Msa0124120:three_prime_UTR 25.0%
AAGAAAAATGTAGAGAGCAA+AGG + chr1_3:51654624-51654643 Msa0124120:CDS 30.0%
AAAGTTCTTGTTGAAACTCA+AGG + chr1_3:51654746-51654765 Msa0124120:CDS 30.0%
!!! ATTATGGTTTTTTACTCGTG+AGG + chr1_3:51654940-51654959 Msa0124120:intron 30.0%
CATATACTTCAGAATGTTAG+TGG + chr1_3:51655338-51655357 Msa0124120:CDS 30.0%
TTGTCTTAAATTCACCTTCT+AGG - chr1_3:51655374-51655393 None:intergenic 30.0%
!!! TCAATCATTTTAGGGTAGAA+AGG + chr1_3:51655583-51655602 Msa0124120:intron 30.0%
!!! CAATCATTTTAGGGTAGAAA+GGG + chr1_3:51655584-51655603 Msa0124120:intron 30.0%
!!! AATCATTTTAGGGTAGAAAG+GGG + chr1_3:51655585-51655604 Msa0124120:intron 30.0%
ACCGAATATAATCACATTGT+CGG + chr1_3:51655735-51655754 Msa0124120:intron 30.0%
ACCGACAATGTGATTATATT+CGG - chr1_3:51655739-51655758 None:intergenic 30.0%
! ACAAGACACGTAAACAATTT+TGG + chr1_3:51655778-51655797 Msa0124120:intron 30.0%
TACCTTTGATTCAAATCAGA+TGG + chr1_3:51655862-51655881 Msa0124120:intron 30.0%
! TACCATCTGATTTGAATCAA+AGG - chr1_3:51655867-51655886 None:intergenic 30.0%
! AGTATTTCAAGTGTCTGAAA+TGG - chr1_3:51655927-51655946 None:intergenic 30.0%
TTCCATGTGGTAAATTTCTA+CGG - chr1_3:51655968-51655987 None:intergenic 30.0%
TGTCAAATTCAAATTCCATG+TGG - chr1_3:51655981-51656000 None:intergenic 30.0%
TGATGAAACTTCAGAAATCT+GGG + chr1_3:51656056-51656075 Msa0124120:intron 30.0%
AGTCAACATGATAATCACAT+TGG + chr1_3:51656142-51656161 Msa0124120:CDS 30.0%
GTAGTATTTGTGAAACAGTT+TGG + chr1_3:51656449-51656468 Msa0124120:intron 30.0%
! AAACAGTTTGGGATAACTTA+TGG + chr1_3:51656461-51656480 Msa0124120:intron 30.0%
ATTATACGGAAATGAGCTTA+TGG - chr1_3:51656505-51656524 None:intergenic 30.0%
CTTAGACATAAGCACTTATA+TGG + chr1_3:51656615-51656634 Msa0124120:intron 30.0%
TGTTCACCATTTCAAACATA+AGG - chr1_3:51656706-51656725 None:intergenic 30.0%
GTAATTCACTCAAAATATGC+AGG + chr1_3:51656763-51656782 Msa0124120:intron 30.0%
AATCTGCAACATATCACAAA+GGG - chr1_3:51656903-51656922 None:intergenic 30.0%
AAATCTGCAACATATCACAA+AGG - chr1_3:51656904-51656923 None:intergenic 30.0%
! TTGTGATATGTTGCAGATTT+TGG + chr1_3:51656904-51656923 Msa0124120:intron 30.0%
! TGTGATATGTTGCAGATTTT+GGG + chr1_3:51656905-51656924 Msa0124120:intron 30.0%
CAGGTATAATCTATTTGACA+AGG + chr1_3:51657008-51657027 Msa0124120:intron 30.0%
TTCATGGATGAGATATCAAA+TGG + chr1_3:51657141-51657160 Msa0124120:CDS 30.0%
TGACATCAAGAAAAGATCAA+TGG + chr1_3:51657513-51657532 Msa0124120:CDS 30.0%
GAAAAGATCAATGGCAATAT+TGG + chr1_3:51657522-51657541 Msa0124120:CDS 30.0%
TTGACAGTGACAAAGTTATA+AGG - chr1_3:51657563-51657582 None:intergenic 30.0%
TTATAACTTTGTCACTGTCA+AGG + chr1_3:51657562-51657581 Msa0124120:CDS 30.0%
TTTAGACTTGTCAAATGGAT+CGG - chr1_3:51657645-51657664 None:intergenic 30.0%
GTCTTGATCACAAAGAAATA+TGG + chr1_3:51657677-51657696 Msa0124120:CDS 30.0%
GAAATTTAAACTCACTTGTG+TGG - chr1_3:51657789-51657808 None:intergenic 30.0%
! CCTTTACTCGATCAAATTTT+TGG - chr1_3:51657836-51657855 None:intergenic 30.0%
CCAAAAATTTGATCGAGTAA+AGG + chr1_3:51657833-51657852 Msa0124120:intron 30.0%
TCTCTTTGCTTGTAAAAGAT+AGG - chr1_3:51658138-51658157 None:intergenic 30.0%
! ATCTTCTTTTCTATCCTTCA+TGG + chr1_3:51658157-51658176 Msa0124120:CDS 30.0%
! TCTTCTTTTCTATCCTTCAT+GGG + chr1_3:51658158-51658177 Msa0124120:CDS 30.0%
GCAACTTCAATGATAGTTAT+TGG - chr1_3:51658216-51658235 None:intergenic 30.0%
! TATCATTGAAGTTGCCATTT+GGG + chr1_3:51658221-51658240 Msa0124120:CDS 30.0%
CATATGAAACTTTCTTAGCT+AGG + chr1_3:51658307-51658326 Msa0124120:intron 30.0%
AGCCTAATGATAAATCTGAT+TGG + chr1_3:51658351-51658370 Msa0124120:intron 30.0%
TGCCAATCAGATTTATCATT+AGG - chr1_3:51658356-51658375 None:intergenic 30.0%
TAATGATAAATCTGATTGGC+AGG + chr1_3:51658355-51658374 Msa0124120:intron 30.0%
TGAAAATGTTCCAAATGTGT+TGG - chr1_3:51658475-51658494 None:intergenic 30.0%
ATGTGCATAAATGGTTTCTT+TGG + chr1_3:51658707-51658726 Msa0124120:CDS 30.0%
TGTGCATAAATGGTTTCTTT+GGG + chr1_3:51658708-51658727 Msa0124120:CDS 30.0%
ATAGCTGTGAATGAATTTCT+TGG + chr1_3:51658769-51658788 Msa0124120:CDS 30.0%
ACATTAAAAACAAAAGGGGT+TGG - chr1_3:51658815-51658834 None:intergenic 30.0%
ATAGGCAATTCAATGATCTT+TGG + chr1_3:51658858-51658877 Msa0124120:intron 30.0%
TCCTAATTCCAATGAAACAT+TGG + chr1_3:51658928-51658947 Msa0124120:CDS 30.0%
CCTAATTCCAATGAAACATT+GGG + chr1_3:51658929-51658948 Msa0124120:CDS 30.0%
! TATTGGTATTGGATTGGAAT+TGG + chr1_3:51658992-51659011 Msa0124120:CDS 30.0%
TAACTATGTCTTGGATCTAA+AGG - chr1_3:51659293-51659312 None:intergenic 30.0%
!!! GCGAATGTTTTTTGATTCTT+CGG - chr1_3:51659853-51659872 None:intergenic 30.0%
! AATCTTTGCTATATTCTGCA+TGG + chr1_3:51659932-51659951 Msa0124120:CDS 30.0%
GATGTTTATTGAGGAAGTTA+TGG + chr1_3:51660089-51660108 Msa0124120:intron 30.0%
GAATCCATCGATAATATTCA+TGG + chr1_3:51660221-51660240 Msa0124120:CDS 30.0%
TCATCCATGAATATTATCGA+TGG - chr1_3:51660228-51660247 None:intergenic 30.0%
CAATTGTAATGAGAACAGTA+AGG + chr1_3:51660280-51660299 Msa0124120:CDS 30.0%
ATATATCTATACTTGGCTGA+TGG - chr1_3:51660344-51660363 None:intergenic 30.0%
GCGTCAAATATATCTATACT+TGG - chr1_3:51660351-51660370 None:intergenic 30.0%
GAAAATTCTTACCTCATCAA+AGG - chr1_3:51660373-51660392 None:intergenic 30.0%
ACTTAGTGCATGAATACTAT+AGG + chr1_3:51660607-51660626 Msa0124120:intron 30.0%
TGAATACTATAGGCTATTCA+AGG + chr1_3:51660617-51660636 Msa0124120:intron 30.0%
!! AGATCTTTTGAACTTTGAGA+AGG - chr1_3:51660945-51660964 None:intergenic 30.0%
CTCCTATTTACTATAATGAC+CGG + chr1_3:51661071-51661090 Msa0124120:CDS 30.0%
TACCGGTCATTATAGTAAAT+AGG - chr1_3:51661076-51661095 None:intergenic 30.0%
ATAATGACCGGTATATTGTT+TGG + chr1_3:51661083-51661102 Msa0124120:CDS 30.0%
! TATTGTTTGGCCTGATATTT+TGG + chr1_3:51661096-51661115 Msa0124120:CDS 30.0%
! ATTGTTTGGCCTGATATTTT+GGG + chr1_3:51661097-51661116 Msa0124120:CDS 30.0%
GCAAGATTTATTCAATGCAA+TGG + chr1_3:51661247-51661266 Msa0124120:CDS 30.0%
CAACGATTGATCACAAAATT+CGG + chr1_3:51661556-51661575 Msa0124120:intron 30.0%
AATATGAGTCATACACAACA+TGG + chr1_3:51661724-51661743 Msa0124120:intron 30.0%
TCGATAAACGAATCATTCAA+TGG + chr1_3:51661791-51661810 Msa0124120:intron 30.0%
ATCATAGTATATGCCATGAT+GGG + chr1_3:51661928-51661947 Msa0124120:CDS 30.0%
ATACTATGGTATGATGACAA+TGG + chr1_3:51662020-51662039 Msa0124120:CDS 30.0%
TGTTATTAGGAAAGGTTGTT+AGG - chr1_3:51662148-51662167 None:intergenic 30.0%
AATGACAGAGAATACCAATA+TGG + chr1_3:51662251-51662270 Msa0124120:intron 30.0%
! AAAGGGTTGAAGAATTTGTT+AGG + chr1_3:51662371-51662390 Msa0124120:CDS 30.0%
!!! TGGAGTGATTTCATCTTTTT+TGG - chr1_3:51662507-51662526 None:intergenic 30.0%
GTTCTCATATTCTCAATGTA+AGG + chr1_3:51662572-51662591 Msa0124120:three_prime_UTR 30.0%
ATGAGGTTCTTATTCATGTA+TGG - chr1_3:51662610-51662629 None:intergenic 30.0%
AATAAGAACCTCATGTAACT+AGG + chr1_3:51662616-51662635 Msa0124120:three_prime_UTR 30.0%
AGGCATAATTCTTTCAGTAA+AGG + chr1_3:51662636-51662655 Msa0124120:three_prime_UTR 30.0%
TTGAGAAAACATCCATGCAA+TGG - chr1_3:51654530-51654549 None:intergenic 35.0%
GTTGAAACTCAAGGAAAGAA+TGG + chr1_3:51654755-51654774 Msa0124120:CDS 35.0%
GGCCCTTAAAGTTAGTTATA+AGG - chr1_3:51654991-51655010 None:intergenic 35.0%
!!! GGCCAGAATTGTTTTAAGAT+TGG + chr1_3:51655007-51655026 Msa0124120:intron 35.0%
CTTCTTTGTGAATGTGATAG+AGG + chr1_3:51655178-51655197 Msa0124120:CDS 35.0%
! TGTAACTGTTTCTTTGGACT+TGG - chr1_3:51655320-51655339 None:intergenic 35.0%
!! TGTAGGATGACATTGCTTTT+AGG + chr1_3:51655476-51655495 Msa0124120:intron 35.0%
!! GTAGGATGACATTGCTTTTA+GGG + chr1_3:51655477-51655496 Msa0124120:intron 35.0%
!!! ATCATTTTAGGGTAGAAAGG+GGG + chr1_3:51655586-51655605 Msa0124120:intron 35.0%
AAACTGTGTGATGCATTTAC+CGG + chr1_3:51655895-51655914 Msa0124120:intron 35.0%
GTGGTAAATTTCTACGGAAA+AGG - chr1_3:51655962-51655981 None:intergenic 35.0%
TTCCGTAGAAATTTACCACA+TGG + chr1_3:51655963-51655982 Msa0124120:intron 35.0%
GTGATGAAACTTCAGAAATC+TGG + chr1_3:51656055-51656074 Msa0124120:intron 35.0%
AGAGTAACATACAATGGGAA+AGG + chr1_3:51656079-51656098 Msa0124120:CDS 35.0%
GTTTGTTCCACAAAGAACAT+CGG + chr1_3:51656111-51656130 Msa0124120:CDS 35.0%
ATATAAGCCGATGTTCTTTG+TGG - chr1_3:51656121-51656140 None:intergenic 35.0%
TAGGCATTAATATCAGGATC+TGG - chr1_3:51656370-51656389 None:intergenic 35.0%
CTGTTTCACAAATACTACGT+CGG - chr1_3:51656447-51656466 None:intergenic 35.0%
GGAGAGCTTATGGAATTATA+CGG - chr1_3:51656519-51656538 None:intergenic 35.0%
! GGTCATTGACTACATTCTTA+AGG + chr1_3:51656817-51656836 Msa0124120:CDS 35.0%
ATCTGCAACATATCACAAAG+GGG - chr1_3:51656902-51656921 None:intergenic 35.0%
! GTGATATGTTGCAGATTTTG+GGG + chr1_3:51656906-51656925 Msa0124120:intron 35.0%
CTGAGATACCTCTTATCATT+TGG - chr1_3:51656964-51656983 None:intergenic 35.0%
!! CAAATGATAAGAGGTATCTC+AGG + chr1_3:51656962-51656981 Msa0124120:CDS 35.0%
!! ACCTATAAAGGTGTTGTTCA+TGG + chr1_3:51657125-51657144 Msa0124120:CDS 35.0%
TCCATGAACAACACCTTTAT+AGG - chr1_3:51657129-51657148 None:intergenic 35.0%
GGATGAGATATCAAATGGTT+TGG + chr1_3:51657146-51657165 Msa0124120:CDS 35.0%
GATATACTACTTCTCACTGA+TGG + chr1_3:51657285-51657304 Msa0124120:CDS 35.0%
GATGGACAAATTGTGTATCA+AGG + chr1_3:51657303-51657322 Msa0124120:CDS 35.0%
!!! CTTGAGTTTTTTGAATCGAC+CGG + chr1_3:51657342-51657361 Msa0124120:CDS 35.0%
TTTCCCTAATGCAATGCAAT+AGG + chr1_3:51657490-51657509 Msa0124120:intron 35.0%
TCACCTATTGCATTGCATTA+GGG - chr1_3:51657496-51657515 None:intergenic 35.0%
GCCTTCGAATTATTTCATGT+AGG + chr1_3:51657596-51657615 Msa0124120:CDS 35.0%
GCCTACATGAAATAATTCGA+AGG - chr1_3:51657600-51657619 None:intergenic 35.0%
TTTCATGTAGGCAAACAACT+TGG + chr1_3:51657608-51657627 Msa0124120:CDS 35.0%
TTAACAAAAAGGAGCTGCTA+AGG + chr1_3:51657702-51657721 Msa0124120:CDS 35.0%
TAACAAAAAGGAGCTGCTAA+GGG + chr1_3:51657703-51657722 Msa0124120:CDS 35.0%
! TTTTATGGCATAAATGCACG+AGG - chr1_3:51657862-51657881 None:intergenic 35.0%
GCTAAATAAGTAAGCTGAGA+AGG - chr1_3:51657967-51657986 None:intergenic 35.0%
!! ATTGGTATTTTGAGGATCCA+TGG - chr1_3:51658198-51658217 None:intergenic 35.0%
CTATCATTGAAGTTGCCATT+TGG + chr1_3:51658220-51658239 Msa0124120:CDS 35.0%
AATATTTGGGTCAAAGCCAA+TGG - chr1_3:51658265-51658284 None:intergenic 35.0%
!! ATTGGCTTTGACCCAAATAT+TGG + chr1_3:51658264-51658283 Msa0124120:CDS 35.0%
! CAAGGTACCTTCCAATATTT+GGG - chr1_3:51658278-51658297 None:intergenic 35.0%
! TCAAGGTACCTTCCAATATT+TGG - chr1_3:51658279-51658298 None:intergenic 35.0%
!!! CAGGTTTTTTAAACAGTCGT+TGG + chr1_3:51658374-51658393 Msa0124120:intron 35.0%
AGTCCTATGCATTAATCAGA+TGG + chr1_3:51658398-51658417 Msa0124120:CDS 35.0%
ATTAGGAAGGGATATTGTAG+TGG + chr1_3:51658449-51658468 Msa0124120:CDS 35.0%
!!! ACTACTTGCTGTTACTGTTT+TGG + chr1_3:51658494-51658513 Msa0124120:CDS 35.0%
!!! CTACTTGCTGTTACTGTTTT+GGG + chr1_3:51658495-51658514 Msa0124120:CDS 35.0%
!! GGAGGATTTGTTATTTCAAG+AGG + chr1_3:51658516-51658535 Msa0124120:CDS 35.0%
CATTAGAGGATGTGCATAAA+TGG + chr1_3:51658698-51658717 Msa0124120:intron 35.0%
GTGCATAAATGGTTTCTTTG+GGG + chr1_3:51658709-51658728 Msa0124120:CDS 35.0%
!! AATGGTTTCTTTGGGGTTAT+TGG + chr1_3:51658716-51658735 Msa0124120:CDS 35.0%
! GCATTTTGTCCATACATCAA+TGG - chr1_3:51658748-51658767 None:intergenic 35.0%
GTGAATGAATTTCTTGGACA+TGG + chr1_3:51658775-51658794 Msa0124120:CDS 35.0%
ATGAATTTCTTGGACATGGT+TGG + chr1_3:51658779-51658798 Msa0124120:CDS 35.0%
CCCAATGTTTCATTGGAATT+AGG - chr1_3:51658932-51658951 None:intergenic 35.0%
! GATTTTTCCCTCAAGCTTAT+TGG + chr1_3:51658975-51658994 Msa0124120:CDS 35.0%
TCCAATACCAATAAGCTTGA+GGG - chr1_3:51658985-51659004 None:intergenic 35.0%
ATCCAATACCAATAAGCTTG+AGG - chr1_3:51658986-51659005 None:intergenic 35.0%
! CAAGCTTATTGGTATTGGAT+TGG + chr1_3:51658986-51659005 Msa0124120:CDS 35.0%
! ATTGGAATTGGAGCTTTGAT+TGG + chr1_3:51659004-51659023 Msa0124120:CDS 35.0%
CTTATCTCAAGAGAAATTGC+AGG + chr1_3:51659201-51659220 Msa0124120:CDS 35.0%
ATATAGGGAGTGAAAAGTCA+AGG + chr1_3:51659655-51659674 Msa0124120:intron 35.0%
!!! ACTCTAATGGATGTTTTAGC+TGG + chr1_3:51659778-51659797 Msa0124120:CDS 35.0%
TTAGCTGGAAGAAAAACTAG+TGG + chr1_3:51659793-51659812 Msa0124120:CDS 35.0%
!! TTTTTGATTCTTCGGATAGC+CGG - chr1_3:51659845-51659864 None:intergenic 35.0%
AAAAACATTCGCTCGCATAT+CGG + chr1_3:51659861-51659880 Msa0124120:CDS 35.0%
TGAGATGCAGATGTTTATTG+AGG + chr1_3:51660080-51660099 Msa0124120:intron 35.0%
!! TCATTAAGAGAAGCACTTGT+TGG + chr1_3:51660129-51660148 Msa0124120:CDS 35.0%
TATATTTGACGCCTTTGATG+AGG + chr1_3:51660359-51660378 Msa0124120:CDS 35.0%
! CTCAAAGTACTCAATCAGAT+CGG - chr1_3:51660524-51660543 None:intergenic 35.0%
ATGGTTATAATCCTGCAACA+TGG + chr1_3:51660657-51660676 Msa0124120:CDS 35.0%
AGGAAAAGAGGCAAATCTTA+AGG + chr1_3:51660700-51660719 Msa0124120:CDS 35.0%
ACAAAAACTCAGAACTACAC+CGG + chr1_3:51660741-51660760 Msa0124120:CDS 35.0%
! GTTTTTACTAGGAGTCTAAC+CGG - chr1_3:51660763-51660782 None:intergenic 35.0%
CTAGTATCAAGATCTTTCTG+CGG - chr1_3:51660871-51660890 None:intergenic 35.0%
!! CACAATGTATAGCTTGTTTG+TGG + chr1_3:51661000-51661019 Msa0124120:CDS 35.0%
TATCAGGCCAAACAATATAC+CGG - chr1_3:51661093-51661112 None:intergenic 35.0%
! TTGTTTGGCCTGATATTTTG+GGG + chr1_3:51661098-51661117 Msa0124120:CDS 35.0%
GTTCTCTCAATTGCTACTAT+TGG - chr1_3:51661329-51661348 None:intergenic 35.0%
TTCAATGGAAAGAGTTGTCA+AGG + chr1_3:51661806-51661825 Msa0124120:intron 35.0%
TTGGTTCAAGCTGTTGTATA+TGG + chr1_3:51661904-51661923 Msa0124120:CDS 35.0%
TGGTTCAAGCTGTTGTATAT+GGG + chr1_3:51661905-51661924 Msa0124120:CDS 35.0%
GATCATAGTATATGCCATGA+TGG + chr1_3:51661927-51661946 Msa0124120:CDS 35.0%
! GGACAGCTTCAAAAATTTTG+TGG + chr1_3:51661959-51661978 Msa0124120:CDS 35.0%
! AACATGTGGATTTGGAGTTA+TGG - chr1_3:51662046-51662065 None:intergenic 35.0%
GAATAATGAAGCCTGAGAAA+AGG - chr1_3:51662107-51662126 None:intergenic 35.0%
TAGGTGTAACTCACAGATAA+GGG - chr1_3:51662129-51662148 None:intergenic 35.0%
TTAGGTGTAACTCACAGATA+AGG - chr1_3:51662130-51662149 None:intergenic 35.0%
! GAATACCAATATGGTGGAAA+TGG + chr1_3:51662260-51662279 Msa0124120:CDS 35.0%
TAGTACCATTTCCACCATAT+TGG - chr1_3:51662268-51662287 None:intergenic 35.0%
! TATGGTGGAAATGGTACTAT+TGG + chr1_3:51662269-51662288 Msa0124120:CDS 35.0%
GTTCATGTTGTGTCCATATT+GGG - chr1_3:51662335-51662354 None:intergenic 35.0%
TGTTCATGTTGTGTCCATAT+TGG - chr1_3:51662336-51662355 None:intergenic 35.0%
AACATGAACACACTTGACAA+TGG + chr1_3:51662346-51662365 Msa0124120:CDS 35.0%
TTTGCACTTATCTTCACCTT+TGG + chr1_3:51662463-51662482 Msa0124120:CDS 35.0%
GTTGAATGCTTTGATACCAA+AGG - chr1_3:51662482-51662501 None:intergenic 35.0%
!! AAGCTTTTGAAGAGAAGCAT+TGG - chr1_3:51662527-51662546 None:intergenic 35.0%
GAATTATGCCTAGTTACATG+AGG - chr1_3:51662627-51662646 None:intergenic 35.0%
AGAGGAGTGACACTAAAACA+TGG + chr1_3:51654499-51654518 Msa0124120:CDS 40.0%
AACATGGAAGAACCATTGCA+TGG + chr1_3:51654515-51654534 Msa0124120:CDS 40.0%
ATCTGAACGTGAAGATGATG+AGG + chr1_3:51654551-51654570 Msa0124120:CDS 40.0%
GAGAGCAAAGGAGAAGAAAA+AGG + chr1_3:51654636-51654655 Msa0124120:CDS 40.0%
AACTCAAGGAAAGAATGGAC+AGG + chr1_3:51654760-51654779 Msa0124120:CDS 40.0%
!!! GTTTTTTACTCGTGAGGTGT+CGG + chr1_3:51654946-51654965 Msa0124120:intron 40.0%
AACTAAACCTTGCACAGAGT+TGG + chr1_3:51655062-51655081 Msa0124120:intron 40.0%
! GTGGAAGCACAAGTTTATGT+TGG + chr1_3:51655128-51655147 Msa0124120:CDS 40.0%
GTGGAATCATAAAGCCTAGA+AGG + chr1_3:51655357-51655376 Msa0124120:CDS 40.0%
! TGGAAAGACCACTTTGTTGT+TGG + chr1_3:51655511-51655530 Msa0124120:CDS 40.0%
GAGACTTGGCAAAGATTTGA+AGG + chr1_3:51655544-51655563 Msa0124120:CDS 40.0%
!!! TCATTTTAGGGTAGAAAGGG+GGG + chr1_3:51655587-51655606 Msa0124120:intron 40.0%
! GTGTCTGAAATGGATTCATC+CGG - chr1_3:51655917-51655936 None:intergenic 40.0%
TCTGGGAGAGTAACATACAA+TGG + chr1_3:51656073-51656092 Msa0124120:CDS 40.0%
CTGGGAGAGTAACATACAAT+GGG + chr1_3:51656074-51656093 Msa0124120:CDS 40.0%
CTTTCTCAGCAAGATGTCAA+GGG + chr1_3:51656191-51656210 Msa0124120:CDS 40.0%
TTTCTCAGCAAGATGTCAAG+GGG + chr1_3:51656192-51656211 Msa0124120:CDS 40.0%
CAAGGGGTTGGACAAAATTA+CGG + chr1_3:51656208-51656227 Msa0124120:CDS 40.0%
TGAACTGCTGAGAAAAGAGA+AGG + chr1_3:51656330-51656349 Msa0124120:CDS 40.0%
TGAGCTTATGGACATGTCAT+AGG - chr1_3:51656493-51656512 None:intergenic 40.0%
!! GCTGTTTTCATAAGCTATCG+TGG - chr1_3:51656540-51656559 None:intergenic 40.0%
! TGATGTTTGTGCTGACACAA+TGG + chr1_3:51656931-51656950 Msa0124120:CDS 40.0%
GTAGGAGACCAAATGATAAG+AGG + chr1_3:51656953-51656972 Msa0124120:CDS 40.0%
!! ATGATAAGAGGTATCTCAGG+TGG + chr1_3:51656965-51656984 Msa0124120:CDS 40.0%
! ATTTTGTGAAGGTGAGATGC+TGG + chr1_3:51657098-51657117 Msa0124120:intron 40.0%
!! AGTTCATAAGTTTCTGGTGC+TGG - chr1_3:51657258-51657277 None:intergenic 40.0%
TTCAAGTGTCCCGAAAGAAA+AGG + chr1_3:51657366-51657385 Msa0124120:CDS 40.0%
! ATCAGCAACGCCTTTTCTTT+CGG - chr1_3:51657379-51657398 None:intergenic 40.0%
GTCACCTATTGCATTGCATT+AGG - chr1_3:51657497-51657516 None:intergenic 40.0%
AATGGTAGAGTGGTACATCT+TGG - chr1_3:51658019-51658038 None:intergenic 40.0%
GTATGTTTGTGCATCCTCAA+TGG - chr1_3:51658037-51658056 None:intergenic 40.0%
TGAGGATGCACAAACATACA+TGG + chr1_3:51658038-51658057 Msa0124120:CDS 40.0%
GAGGATGCACAAACATACAT+GGG + chr1_3:51658039-51658058 Msa0124120:CDS 40.0%
GTCACTGTGGCAATGTTTAA+TGG + chr1_3:51658078-51658097 Msa0124120:CDS 40.0%
GTAAGAGATGCATTCCCAAA+TGG - chr1_3:51658238-51658257 None:intergenic 40.0%
GCTTTGACCCAAATATTGGA+AGG + chr1_3:51658268-51658287 Msa0124120:CDS 40.0%
ACGCCATCTGATTAATGCAT+AGG - chr1_3:51658404-51658423 None:intergenic 40.0%
! GTCTGCGTTATTTCGGTTTA+TGG + chr1_3:51658422-51658441 Msa0124120:CDS 40.0%
TTTCGGTTTATGGCAGCATT+AGG + chr1_3:51658432-51658451 Msa0124120:CDS 40.0%
GTTTATGGCAGCATTAGGAA+GGG + chr1_3:51658437-51658456 Msa0124120:CDS 40.0%
ATTGTAGTGGCCAACACATT+TGG + chr1_3:51658462-51658481 Msa0124120:CDS 40.0%
GGAACAACCTGTAACATTCA+AGG - chr1_3:51658911-51658930 None:intergenic 40.0%
CGATACTCCCAATGTTTCAT+TGG - chr1_3:51658939-51658958 None:intergenic 40.0%
! GTATCGATACTGAAATCTCG+CGG + chr1_3:51658953-51658972 Msa0124120:CDS 40.0%
TCCCTCAAGCTTATTGGTAT+TGG + chr1_3:51658981-51659000 Msa0124120:CDS 40.0%
TGTCTTTGCAGCATTCAGAA+AGG + chr1_3:51659168-51659187 Msa0124120:intron 40.0%
TCTAAAGGACTCACTAGAAG+AGG - chr1_3:51659278-51659297 None:intergenic 40.0%
ACAAAGATGGATGAAGCAGT+TGG + chr1_3:51659378-51659397 Msa0124120:CDS 40.0%
GAAAACAAAGCTAGCAGTAG+TGG + chr1_3:51659402-51659421 Msa0124120:CDS 40.0%
! CAGTAGTGGAAGAAAAGGAA+TGG + chr1_3:51659416-51659435 Msa0124120:CDS 40.0%
TCATCAAAACTGAGGGATAG+AGG - chr1_3:51659456-51659475 None:intergenic 40.0%
!! CTTAACTAGAAAGGTACCTG+TGG - chr1_3:51659501-51659520 None:intergenic 40.0%
! GATCGTCTCGAACTTTTGAA+GGG + chr1_3:51659688-51659707 Msa0124120:CDS 40.0%
!!! GAACTTTTGAAGGGTGTTAG+TGG + chr1_3:51659697-51659716 Msa0124120:CDS 40.0%
ATAAGAGCTGTTAGTACTCC+TGG - chr1_3:51659733-51659752 None:intergenic 40.0%
!! AGGAGTACTAACAGCTCTTA+TGG + chr1_3:51659732-51659751 Msa0124120:CDS 40.0%
! GGAGTACTAACAGCTCTTAT+GGG + chr1_3:51659733-51659752 Msa0124120:CDS 40.0%
ACAGCTCTTATGGGTATAAG+TGG + chr1_3:51659742-51659761 Msa0124120:CDS 40.0%
TGCTGGAAAGACTACTCTAA+TGG + chr1_3:51659765-51659784 Msa0124120:CDS 40.0%
AAAACATTCGCTCGCATATC+GGG + chr1_3:51659862-51659881 Msa0124120:CDS 40.0%
!! TCAGCTGCTACTTCTGAAAT+TGG + chr1_3:51660456-51660475 Msa0124120:intron 40.0%
!! CAGCTGCTACTTCTGAAATT+GGG + chr1_3:51660457-51660476 Msa0124120:intron 40.0%
!! TGCTACTTCTGAAATTGGGA+GGG + chr1_3:51660461-51660480 Msa0124120:CDS 40.0%
CGATCTGATTGAGTACTTTG+AGG + chr1_3:51660522-51660541 Msa0124120:CDS 40.0%
GGAGTTCCTAAGATCAAAGA+TGG + chr1_3:51660638-51660657 Msa0124120:CDS 40.0%
TAATCCTGCAACATGGATGT+TGG + chr1_3:51660664-51660683 Msa0124120:CDS 40.0%
ATTTCCAACATCCATGTTGC+AGG - chr1_3:51660671-51660690 None:intergenic 40.0%
ATGTTGGAAATTACGTCAGC+AGG + chr1_3:51660680-51660699 Msa0124120:CDS 40.0%
AATTACGTCAGCAGGAAAAG+AGG + chr1_3:51660688-51660707 Msa0124120:CDS 40.0%
TATGCTGCTGTTACCTTCAT+AGG + chr1_3:51661278-51661297 Msa0124120:CDS 40.0%
ATGCTGCTGTTACCTTCATA+GGG + chr1_3:51661279-51661298 Msa0124120:CDS 40.0%
ACCTTCATAGGGGTTGTAAA+TGG + chr1_3:51661290-51661309 Msa0124120:CDS 40.0%
ACCATTTACAACCCCTATGA+AGG - chr1_3:51661294-51661313 None:intergenic 40.0%
! AATACCTGTGCAAGAGCATA+TGG - chr1_3:51661395-51661414 None:intergenic 40.0%
GAGTAGACTCTCAAACTTAG+AGG - chr1_3:51661693-51661712 None:intergenic 40.0%
AACAGCTTGAACCAAGATGT+GGG - chr1_3:51661899-51661918 None:intergenic 40.0%
GATAATATGCCAGCAACATG+TGG - chr1_3:51662060-51662079 None:intergenic 40.0%
CCATATTGCATAGAATGAGG+TGG - chr1_3:51662082-51662101 None:intergenic 40.0%
CCACCTCATTCTATGCAATA+TGG + chr1_3:51662079-51662098 Msa0124120:CDS 40.0%
GCACCATATTGCATAGAATG+AGG - chr1_3:51662085-51662104 None:intergenic 40.0%
GACAGAGAATACCAATATGG+TGG + chr1_3:51662254-51662273 Msa0124120:intron 40.0%
ATTGGATTTGTCCTGTTGCA+TGG + chr1_3:51662287-51662306 Msa0124120:CDS 40.0%
ACACACTTGACAATGGTCAA+AGG + chr1_3:51662353-51662372 Msa0124120:CDS 40.0%
CACACTTGACAATGGTCAAA+GGG + chr1_3:51662354-51662373 Msa0124120:CDS 40.0%
!!! GGTTTTGAACATGACTTCCT+AGG + chr1_3:51662403-51662422 Msa0124120:CDS 40.0%
TTCAAGTCCAACTCTGTGCA+AGG - chr1_3:51655072-51655091 None:intergenic 45.0%
AAAGTGGTCTTTCCAGAACC+AGG - chr1_3:51655506-51655525 None:intergenic 45.0%
!! GACCACTTTGTTGTTGGCAT+TGG + chr1_3:51655517-51655536 Msa0124120:CDS 45.0%
AGCCAATGCCAACAACAAAG+TGG - chr1_3:51655522-51655541 None:intergenic 45.0%
!! ACTTTGTTGTTGGCATTGGC+TGG + chr1_3:51655521-51655540 Msa0124120:CDS 45.0%
!! CTTTGTTGTTGGCATTGGCT+GGG + chr1_3:51655522-51655541 Msa0124120:CDS 45.0%
TGTATGTGTCAGCGATCCAT+AGG - chr1_3:51655663-51655682 None:intergenic 45.0%
CTTGTGTCTGCATTAGTGTC+AGG - chr1_3:51655763-51655782 None:intergenic 45.0%
GCTTTCTCAGCAAGATGTCA+AGG + chr1_3:51656190-51656209 Msa0124120:CDS 45.0%
AAGCTATCGTGGAGAGCTTA+TGG - chr1_3:51656529-51656548 None:intergenic 45.0%
ATGCAGGAAGCAGCAATAGA+AGG + chr1_3:51656779-51656798 Msa0124120:intron 45.0%
CAATGACCACACTGTTCTGA+TGG - chr1_3:51656805-51656824 None:intergenic 45.0%
! GTTTGTGCTGACACAATGGT+AGG + chr1_3:51656935-51656954 Msa0124120:CDS 45.0%
GAGAAAAAGCGACTCACTAC+AGG + chr1_3:51656989-51657008 Msa0124120:CDS 45.0%
! GATGCTGGTTGGACCTATAA+AGG + chr1_3:51657113-51657132 Msa0124120:CDS 45.0%
TCTTTCGGGACACTTGAAAC+CGG - chr1_3:51657364-51657383 None:intergenic 45.0%
! TCAGCAACGCCTTTTCTTTC+GGG - chr1_3:51657378-51657397 None:intergenic 45.0%
CAAACAACTTGGAGAAGAGC+TGG + chr1_3:51657619-51657638 Msa0124120:CDS 45.0%
GATGTACCACTCTACCATTG+AGG + chr1_3:51658020-51658039 Msa0124120:CDS 45.0%
!! CATGGGAGCACTATTCTTCA+CGG + chr1_3:51658056-51658075 Msa0124120:CDS 45.0%
ACTATTCTTCACGGTCACTG+TGG + chr1_3:51658065-51658084 Msa0124120:CDS 45.0%
GGAAGAGAATAAGCCCATGA+AGG - chr1_3:51658174-51658193 None:intergenic 45.0%
!! GGTATTTTGAGGATCCATGG+TGG - chr1_3:51658195-51658214 None:intergenic 45.0%
TGCATCTCTTACTACGCCAT+TGG + chr1_3:51658246-51658265 Msa0124120:CDS 45.0%
AGATGGCGTCTGCGTTATTT+CGG + chr1_3:51658415-51658434 Msa0124120:CDS 45.0%
GGTTTATGGCAGCATTAGGA+AGG + chr1_3:51658436-51658455 Msa0124120:CDS 45.0%
!!! CTTGCTGTTACTGTTTTGGG+AGG + chr1_3:51658498-51658517 Msa0124120:CDS 45.0%
TCTTGGACATGGTTGGAGAA+AGG + chr1_3:51658786-51658805 Msa0124120:CDS 45.0%
GCATTCAGAAAGGATCAAGC+AGG + chr1_3:51659178-51659197 Msa0124120:intron 45.0%
! GCTAGCAGTAGTGGAAGAAA+AGG + chr1_3:51659411-51659430 Msa0124120:CDS 45.0%
CTGAGGGATAGAGGTTGAAA+AGG - chr1_3:51659447-51659466 None:intergenic 45.0%
GAAAAGTCAAGGAGTTTCCG+AGG + chr1_3:51659666-51659685 Msa0124120:CDS 45.0%
CAAAAGTTCGAGACGATCCT+CGG - chr1_3:51659686-51659705 None:intergenic 45.0%
! GGATCGTCTCGAACTTTTGA+AGG + chr1_3:51659687-51659706 Msa0124120:CDS 45.0%
! GTTAGTGGTGCTTTTAGACC+AGG + chr1_3:51659712-51659731 Msa0124120:CDS 45.0%
CTTATGGGTATAAGTGGTGC+TGG + chr1_3:51659748-51659767 Msa0124120:CDS 45.0%
!! GAAGGAAGCATCACAATAGC+CGG + chr1_3:51659823-51659842 Msa0124120:CDS 45.0%
AGTCGATCGCTCAACTAGAA+AGG + chr1_3:51659972-51659991 Msa0124120:CDS 45.0%
TTCATGGATGAACCAACCTC+TGG + chr1_3:51660237-51660256 Msa0124120:CDS 45.0%
!! CTGCTACTTCTGAAATTGGG+AGG + chr1_3:51660460-51660479 Msa0124120:CDS 45.0%
!! GCTACTTCTGAAATTGGGAG+GGG + chr1_3:51660462-51660481 Msa0124120:CDS 45.0%
CAGATATACGCTGGTCCAAT+AGG + chr1_3:51660487-51660506 Msa0124120:CDS 45.0%
ACTCAATCAGATCGGAACAG+TGG - chr1_3:51660516-51660535 None:intergenic 45.0%
GAGAAGGAACACTAAGCTCT+TGG - chr1_3:51660929-51660948 None:intergenic 45.0%
TGCTGCTGTTACCTTCATAG+GGG + chr1_3:51661280-51661299 Msa0124120:CDS 45.0%
! TGCTACTATTGGTTGTACCG+AGG - chr1_3:51661318-51661337 None:intergenic 45.0%
TTCTACAGAGAAAGAGCTGC+AGG + chr1_3:51661353-51661372 Msa0124120:CDS 45.0%
TATGCCATATGCTCTTGCAC+AGG + chr1_3:51661388-51661407 Msa0124120:CDS 45.0%
! GTCTGAGACGTAGACACAAT+AGG - chr1_3:51661582-51661601 None:intergenic 45.0%
GACTCTCAAACTTAGAGGAC+CGG - chr1_3:51661688-51661707 None:intergenic 45.0%
CATAGAACTTCCCCACATCT+TGG + chr1_3:51661885-51661904 Msa0124120:CDS 45.0%
ACAGCTTGAACCAAGATGTG+GGG - chr1_3:51661898-51661917 None:intergenic 45.0%
CAACAGCTTGAACCAAGATG+TGG - chr1_3:51661900-51661919 None:intergenic 45.0%
! ATGCCATGATGGGATTTGAG+TGG + chr1_3:51661938-51661957 Msa0124120:CDS 45.0%
TGTCCACTCAAATCCCATCA+TGG - chr1_3:51661944-51661963 None:intergenic 45.0%
ACTCCAAATCCACATGTTGC+TGG + chr1_3:51662048-51662067 Msa0124120:CDS 45.0%
ATGCCAGCAACATGTGGATT+TGG - chr1_3:51662054-51662073 None:intergenic 45.0%
! GCAATATGGTGCCTTTTCTC+AGG + chr1_3:51662093-51662112 Msa0124120:CDS 45.0%
TGCATGGACCTTGAATGGAT+TGG + chr1_3:51662303-51662322 Msa0124120:CDS 45.0%
GGAAGTCACCAATCCATTCA+AGG - chr1_3:51662314-51662333 None:intergenic 45.0%
! GGATTGGTGACTTCCCAATA+TGG + chr1_3:51662319-51662338 Msa0124120:CDS 45.0%
TGAACATGACTTCCTAGGAG+TGG + chr1_3:51662408-51662427 Msa0124120:CDS 45.0%
CAACAATTGCAACCACTCCT+AGG - chr1_3:51662423-51662442 None:intergenic 45.0%
AGGAGTGGTTGCAATTGTTG+TGG + chr1_3:51662423-51662442 Msa0124120:CDS 45.0%
!! NNNNNTAATATTTCTTAATT+TGG + chr1_3:51654884-51654903 Msa0124120:intron 5.0%
!!! ACATTGCTTTTAGGGCCACC+TGG + chr1_3:51655485-51655504 Msa0124120:CDS 50.0%
TCAGCAAGATGTCAAGGGGT+TGG + chr1_3:51656196-51656215 Msa0124120:CDS 50.0%
AGAAGGCCATCAGAACAGTG+TGG + chr1_3:51656796-51656815 Msa0124120:CDS 50.0%
TGTGAAGGTGAGATGCTGGT+TGG + chr1_3:51657102-51657121 Msa0124120:intron 50.0%
GTGCATCCTCAATGGTAGAG+TGG - chr1_3:51658029-51658048 None:intergenic 50.0%
GGGCTTATTCTCTTCCACCA+TGG + chr1_3:51658178-51658197 Msa0124120:CDS 50.0%
TGGTCGTCGCCATTGATGTA+TGG + chr1_3:51658736-51658755 Msa0124120:CDS 50.0%
! CTAGTTGAGCGATCGACTTC+AGG - chr1_3:51659970-51659989 None:intergenic 50.0%
! GAAGCACTTGTTGGATTGCC+AGG + chr1_3:51660138-51660157 Msa0124120:CDS 50.0%
CTAGCATCAAGTCCAGAGGT+TGG - chr1_3:51660252-51660271 None:intergenic 50.0%
TGCTCTAGCATCAAGTCCAG+AGG - chr1_3:51660256-51660275 None:intergenic 50.0%
GAGAACAGTAAGGAACACCG+TGG + chr1_3:51660290-51660309 Msa0124120:CDS 50.0%
AGGGGTTGTAAATGGTGCCT+CGG + chr1_3:51661298-51661317 Msa0124120:CDS 50.0%
CCATTCAAGGTCCATGCAAC+AGG - chr1_3:51662301-51662320 None:intergenic 50.0%
CCTGTTGCATGGACCTTGAA+TGG + chr1_3:51662298-51662317 Msa0124120:CDS 50.0%
!!! CTTTTAGGGCCACCTGGTTC+TGG + chr1_3:51655491-51655510 Msa0124120:CDS 55.0%
GTGGTCTTTCCAGAACCAGG+TGG - chr1_3:51655503-51655522 None:intergenic 55.0%
!! TTGGCATTGGCTGGGAGACT+TGG + chr1_3:51655530-51655549 Msa0124120:CDS 55.0%
! GTTGAGCGATCGACTTCAGG+CGG - chr1_3:51659967-51659986 None:intergenic 55.0%
GTTGAAAGTCCACTCTCGCC+TGG - chr1_3:51660159-51660178 None:intergenic 55.0%
GTAAGGAACACCGTGGACAC+AGG + chr1_3:51660297-51660316 Msa0124120:CDS 55.0%
CACAGTACGTCCTGTGTCCA+CGG - chr1_3:51660310-51660329 None:intergenic 55.0%
TCGGAACAGTGGTCGCCTAT+TGG - chr1_3:51660505-51660524 None:intergenic 55.0%
!!! GGCCTGATATTTTGGGGCGT+TGG + chr1_3:51661104-51661123 Msa0124120:CDS 55.0%
CGCCAACGCCCCAAAATATC+AGG - chr1_3:51661109-51661128 None:intergenic 55.0%
!! CTCGTGAGGTGTCGGTTCAG+TGG + chr1_3:51654954-51654973 Msa0124120:intron 60.0%
GTTGGATTGCCAGGCGAGAG+TGG + chr1_3:51660147-51660166 Msa0124120:CDS 60.0%
CGTGGACACAGGACGTACTG+TGG + chr1_3:51660308-51660327 Msa0124120:CDS 60.0%
GGAGGGGAGCAGATATACGC+TGG + chr1_3:51660478-51660497 Msa0124120:CDS 60.0%
!! TTTGGGGCGTTGGCGCGAAA+AGG + chr1_3:51661114-51661133 Msa0124120:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 51654495 51662756 51654495 ID=Msa0124120;Name=Msa0124120
chr1_3 mRNA 51654495 51662756 51654495 ID=Msa0124120-mRNA-1;Parent=Msa0124120;Name=Msa0124120-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.65|0.58|1|1|1|24|240|1424
chr1_3 exon 51654495 51654781 51654495 ID=Msa0124120-mRNA-1:exon:15761;Parent=Msa0124120-mRNA-1
chr1_3 exon 51655079 51655199 51655079 ID=Msa0124120-mRNA-1:exon:15762;Parent=Msa0124120-mRNA-1
chr1_3 exon 51655290 51655378 51655290 ID=Msa0124120-mRNA-1:exon:15763;Parent=Msa0124120-mRNA-1
chr1_3 exon 51655481 51655565 51655481 ID=Msa0124120-mRNA-1:exon:15764;Parent=Msa0124120-mRNA-1
chr1_3 exon 51656070 51656229 51656070 ID=Msa0124120-mRNA-1:exon:15765;Parent=Msa0124120-mRNA-1
chr1_3 exon 51656320 51656396 51656320 ID=Msa0124120-mRNA-1:exon:15766;Parent=Msa0124120-mRNA-1
chr1_3 exon 51656785 51656838 51656785 ID=Msa0124120-mRNA-1:exon:15767;Parent=Msa0124120-mRNA-1
chr1_3 exon 51656920 51657010 51656920 ID=Msa0124120-mRNA-1:exon:15768;Parent=Msa0124120-mRNA-1
chr1_3 exon 51657109 51657410 51657109 ID=Msa0124120-mRNA-1:exon:15769;Parent=Msa0124120-mRNA-1
chr1_3 exon 51657512 51657793 51657512 ID=Msa0124120-mRNA-1:exon:15770;Parent=Msa0124120-mRNA-1
chr1_3 exon 51657973 51658289 51657973 ID=Msa0124120-mRNA-1:exon:15771;Parent=Msa0124120-mRNA-1
chr1_3 exon 51658377 51658537 51658377 ID=Msa0124120-mRNA-1:exon:15772;Parent=Msa0124120-mRNA-1
chr1_3 exon 51658704 51658807 51658704 ID=Msa0124120-mRNA-1:exon:15773;Parent=Msa0124120-mRNA-1
chr1_3 exon 51658923 51659079 51658923 ID=Msa0124120-mRNA-1:exon:15774;Parent=Msa0124120-mRNA-1
chr1_3 exon 51659179 51659283 51659179 ID=Msa0124120-mRNA-1:exon:15775;Parent=Msa0124120-mRNA-1
chr1_3 exon 51659376 51659503 51659376 ID=Msa0124120-mRNA-1:exon:15776;Parent=Msa0124120-mRNA-1
chr1_3 exon 51659661 51659993 51659661 ID=Msa0124120-mRNA-1:exon:15777;Parent=Msa0124120-mRNA-1
chr1_3 exon 51660090 51660380 51660090 ID=Msa0124120-mRNA-1:exon:15778;Parent=Msa0124120-mRNA-1
chr1_3 exon 51660460 51660543 51660460 ID=Msa0124120-mRNA-1:exon:15779;Parent=Msa0124120-mRNA-1
chr1_3 exon 51660629 51660762 51660629 ID=Msa0124120-mRNA-1:exon:15780;Parent=Msa0124120-mRNA-1
chr1_3 exon 51660908 51661135 51660908 ID=Msa0124120-mRNA-1:exon:15781;Parent=Msa0124120-mRNA-1
chr1_3 exon 51661238 51661409 51661238 ID=Msa0124120-mRNA-1:exon:15782;Parent=Msa0124120-mRNA-1
chr1_3 exon 51661880 51662134 51661880 ID=Msa0124120-mRNA-1:exon:15783;Parent=Msa0124120-mRNA-1
chr1_3 exon 51662259 51662756 51662259 ID=Msa0124120-mRNA-1:exon:15784;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51654495 51654781 51654495 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51655079 51655199 51655079 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51655290 51655378 51655290 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51655481 51655565 51655481 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51656070 51656229 51656070 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51656320 51656396 51656320 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51656785 51656838 51656785 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51656920 51657010 51656920 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51657109 51657410 51657109 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51657512 51657793 51657512 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51657973 51658289 51657973 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51658377 51658537 51658377 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51658704 51658807 51658704 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51658923 51659079 51658923 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51659179 51659283 51659179 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51659376 51659503 51659376 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51659661 51659993 51659661 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51660090 51660380 51660090 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51660460 51660543 51660460 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51660629 51660762 51660629 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51660908 51661135 51660908 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51661238 51661409 51661238 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51661880 51662134 51661880 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 CDS 51662259 51662516 51662259 ID=Msa0124120-mRNA-1:cds;Parent=Msa0124120-mRNA-1
chr1_3 three_prime_UTR 51662517 51662756 51662517 ID=Msa0124120-mRNA-1:three_prime_utr;Parent=Msa0124120-mRNA-1
Gene Sequence

>Msa0124120

ATGGAGAGGAGTGACACTAAAACATGGAAGAACCATTGCATGGATGTTTTCTCAAAATCTGAACGTGAAGATGATGAGGAAGCTCTAAAGTGTGTTGCAATAAAGAGAATTCTTACAAGTAAATGCTTTAAGAAAAATGTAGAGAGCAAAGGAGAAGAAAAAGGAAAAGATGTTGAAACAATTCAACTTAAATTGGTAGAGAAAAGAGCATTGTTAGAAAGACTTGTGAAGATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATGGACAGAGTTGGACTTGAACTTCCAACAATTGAAGTTAGATTTGAGGATATAAATGTGGAAGCACAAGTTTATGTTGGAAGTAGAGCATTACCTACATTATTTAACTTCTTTGTGAATGTGATAGAGGGGTGTTTAAATAATCTTCAAATAATTCCAAGTCCAAAGAAACAGTTACATATACTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGGATGACATTGCTTTTAGGGCCACCTGGTTCTGGAAAGACCACTTTGTTGTTGGCATTGGCTGGGAGACTTGGCAAAGATTTGAAGAAATCTGGGAGAGTAACATACAATGGGAAAGGACTAGAAGAGTTTGTTCCACAAAGAACATCGGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACTGTGAGAGAGACACTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACAAAATTACGAAATGTTGACTGAACTGCTGAGAAAAGAGAAGGAATCAAAGATTGAACCAGATCCTGATATTAATGCCTATATGAAGGAAGCAGCAATAGAAGGCCATCAGAACAGTGTGGTCATTGACTACATTCTTAAGATTTTGGGGCTTGATGTTTGTGCTGACACAATGGTAGGAGACCAAATGATAAGAGGTATCTCAGGTGGCGAGAAAAAGCGACTCACTACAGGTGAGATGCTGGTTGGACCTATAAAGGTGTTGTTCATGGATGAGATATCAAATGGTTTGGACAGTTCAACAACTTTTCAGATAATCAACTCAATCAAGCAATCTATTCATATTCTAAATGAAACTGCACTTGTTTCTCTTCTACAACCAGCACCAGAAACTTATGAACTATTTGATGATATACTACTTCTCACTGATGGACAAATTGTGTATCAAGGACCAAAAGAAAATGTACTTGAGTTTTTTGAATCGACCGGTTTCAAGTGTCCCGAAAGAAAAGGCGTTGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCTCGTGAAGATGAACCTTATAACTTTGTCACTGTCAAGGATTTTGCTCGAGCCTTCGAATTATTTCATGTAGGCAAACAACTTGGAGAAGAGCTGGCCGATCCATTTGACAAGTCTAAATTTCATTCAAATGTCTTGATCACAAAGAAATATGGGATTAACAAAAAGGAGCTGCTAAGGGCTTGTGCTAGCAGAGAGTTATTGCTTATGAAGAGAAATTCTTTTGTCTACATATTCAAAGCCACACAACTTACTTATTTAGCTATCTTGACGACGACATTATTTCTACGAACCAAGATGTACCACTCTACCATTGAGGATGCACAAACATACATGGGAGCACTATTCTTCACGGTCACTGTGGCAATGTTTAATGGAATATCAGAGCTAAATATGACTATCATGAAACTTCCTATCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAATAACTATCATTGAAGTTGCCATTTGGGAATGCATCTCTTACTACGCCATTGGCTTTGACCCAAATATTGGAAGGTTTTTTAAACAGTCGTTGGTAGTCCTATGCATTAATCAGATGGCGTCTGCGTTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTGGCCAACACATTTGGAACATTTTCACTACTTGCTGTTACTGTTTTGGGAGGATTTGTTATTTCAAGAGAGGATGTGCATAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAAAATGCTATAGCTGTGAATGAATTTCTTGGACATGGTTGGAGAAAGGTTGTTCCTAATTCCAATGAAACATTGGGAGTATCGATACTGAAATCTCGCGGATTTTTCCCTCAAGCTTATTGGTATTGGATTGGAATTGGAGCTTTGATTGGTTATGTTTTTCTATTTAATTTTCTCTTTGCATTGGCTTTGCACTATCTCAGTCCATTCAGAAAGGATCAAGCAGGCTTATCTCAAGAGAAATTGCAGGAGAGAAATGATTCAACAGCTGAAGAGTTCATTCAATCACAGACACAAAAAACCTCTTCTAATACAAAGATGGATGAAGCAGTTGGCGAAAACAAAGCTAGCAGTAGTGGAAGAAAAGGAATGGTTCTTCCTTTTCAACCTCTATCCCTCAGTTTTGATGATATCAAATATTCTGTTGACATGCCACAGGGAGTGAAAAGTCAAGGAGTTTCCGAGGATCGTCTCGAACTTTTGAAGGGTGTTAGTGGTGCTTTTAGACCAGGAGTACTAACAGCTCTTATGGGTATAAGTGGTGCTGGAAAGACTACTCTAATGGATGTTTTAGCTGGAAGAAAAACTAGTGGATATATTGAAGGAAGCATCACAATAGCCGGCTATCCGAAGAATCAAAAAACATTCGCTCGCATATCGGGATATTGCGAACAATTTGACATACATTCACCTAATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGTTTACCGCCTGAAGTCGATCGCTCAACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAGAGTGGACTTTCAACAGAACAACGCAAGAGACTTACAATTGCAGTTGAACTTGTAGCGAATCCATCGATAATATTCATGGATGAACCAACCTCTGGACTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTAAGGAACACCGTGGACACAGGACGTACTGTGGTGTGCACGATCCATCAGCCAAGTATAGATATATTTGACGCCTTTGATGAGCTGCTACTTCTGAAATTGGGAGGGGAGCAGATATACGCTGGTCCAATAGGCGACCACTGTTCCGATCTGATTGAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAATTACGTCAGCAGGAAAAGAGGCAAATCTTAAGGTCAATTTCAGTGATGTGTACAAAAACTCAGAACTACACCGGAGAAATAAACAATTGATCCAAGAGCTTAGTGTTCCTTCTCAAAGTTCAAAAGATCTATACTTTGATGCTCAATATTCACAGACATTTGTAGCACAATGTATAGCTTGTTTGTGGAAACAACATTTATCATATTGGAGGAATACATCATATACAGCTGTTAGACTCCTATTTACTATAATGACCGGTATATTGTTTGGCCTGATATTTTGGGGCGTTGGCGCGAAAAGTAAAAAGGAGCAAGATTTATTCAATGCAATGGGGTCAATGTATGCTGCTGTTACCTTCATAGGGGTTGTAAATGGTGCCTCGGTACAACCAATAGTAGCAATTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCAGGAATGTATTCAGCTATGCCATATGCTCTTGCACAGGTTATCATAGAACTTCCCCACATCTTGGTTCAAGCTGTTGTATATGGGATCATAGTATATGCCATGATGGGATTTGAGTGGACAGCTTCAAAAATTTTGTGGAATCTCTTCTTCACTTACTTTAGTTTCTTATACTATACATACTATGGTATGATGACAATGGCCATAACTCCAAATCCACATGTTGCTGGCATATTATCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCAATATGGTGGAAATGGTACTATTGGATTTGTCCTGTTGCATGGACCTTGAATGGATTGGTGACTTCCCAATATGGACACAACATGAACACACTTGACAATGGTCAAAGGGTTGAAGAATTTGTTAGGAATTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGCTAGTTTCTCAGTGTTGTTTGCACTTATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA
Protein sequence

>Msa0124120

MERSDTKTWKNHCMDVFSKSEREDDEEALKCVAIKRILTSKCFKKNVESKGEEKGKDVETIQLKLVEKRALLERLVKIAEEDNEKFLLKLKERMDRVGLELPTIEVRFEDINVEAQVYVGSRALPTLFNFFVNVIEGCLNNLQIIPSPKKQLHILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKKSGRVTYNGKGLEEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRKEKESKIEPDPDINAYMKEAAIEGHQNSVVIDYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHILNETALVSLLQPAPETYELFDDILLLTDGQIVYQGPKENVLEFFESTGFKCPERKGVADFLQEVTSRKDQWQYWAREDEPYNFVTVKDFARAFELFHVGKQLGEELADPFDKSKFHSNVLITKKYGINKKELLRACASRELLLMKRNSFVYIFKATQLTYLAILTTTLFLRTKMYHSTIEDAQTYMGALFFTVTVAMFNGISELNMTIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFKQSLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVVPNSNETLGVSILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFALALHYLSPFRKDQAGLSQEKLQERNDSTAEEFIQSQTQKTSSNTKMDEAVGENKASSSGRKGMVLPFQPLSLSFDDIKYSVDMPQGVKSQGVSEDRLELLKGVSGAFRPGVLTALMGISGAGKTTLMDVLAGRKTSGYIEGSITIAGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDRSTRKMFIEEVMELVELNSLREALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPIGDHCSDLIEYFEAIQGVPKIKDGYNPATWMLEITSAGKEANLKVNFSDVYKNSELHRRNKQLIQELSVPSQSSKDLYFDAQYSQTFVAQCIACLWKQHLSYWRNTSYTAVRLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKILWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGHNMNTLDNGQRVEEFVRNYFGFEHDFLGVVAIVVASFSVLFALIFTFGIKAFNFQKR*