AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0010870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010870 MtrunA17_Chr1g0148811 95.114 880 43 0 1 880 545 1424 0.0 1739
Msa0010870 MtrunA17_Chr1g0148811 22.928 567 381 14 305 824 149 706 1.26e-27 120
Msa0010870 MtrunA17_Chr1g0148841 82.267 891 147 1 1 880 557 1447 0.0 1563
Msa0010870 MtrunA17_Chr1g0148841 23.360 625 416 16 308 879 164 778 6.95e-32 134
Msa0010870 MtrunA17_Chr4g0003981 67.727 880 276 2 2 880 565 1437 0.0 1245
Msa0010870 MtrunA17_Chr4g0003981 22.446 646 416 17 231 822 108 722 3.37e-31 132
Msa0010870 MtrunA17_Chr3g0138261 66.741 893 275 4 1 880 557 1440 0.0 1243
Msa0010870 MtrunA17_Chr3g0138261 22.857 560 379 10 308 822 164 715 1.69e-32 136
Msa0010870 MtrunA17_Chr2g0332221 65.267 881 292 5 2 880 559 1427 0.0 1240
Msa0010870 MtrunA17_Chr2g0332221 23.601 572 369 13 307 825 164 720 4.14e-36 148
Msa0010870 MtrunA17_Chr2g0332241 65.494 881 291 5 2 880 559 1428 0.0 1239
Msa0010870 MtrunA17_Chr2g0332241 23.726 628 397 17 307 870 164 773 3.03e-36 148
Msa0010870 MtrunA17_Chr7g0262231 63.164 904 309 3 1 880 553 1456 0.0 1230
Msa0010870 MtrunA17_Chr7g0262231 24.168 571 370 14 305 825 157 714 6.10e-35 144
Msa0010870 MtrunA17_Chr2g0332211 64.739 882 298 5 2 880 640 1511 0.0 1228
Msa0010870 MtrunA17_Chr2g0332211 23.509 570 371 13 307 825 245 800 4.62e-36 148
Msa0010870 MtrunA17_Chr7g0262241 62.930 901 313 5 1 880 553 1453 0.0 1206
Msa0010870 MtrunA17_Chr7g0262241 23.818 571 372 14 305 825 157 714 3.71e-32 135
Msa0010870 MtrunA17_Chr7g0261951 64.000 900 304 3 1 880 553 1452 0.0 1192
Msa0010870 MtrunA17_Chr7g0261951 23.785 576 366 18 305 825 157 714 1.47e-31 133
Msa0010870 MtrunA17_Chr7g0261971 63.333 900 310 3 1 880 549 1448 0.0 1190
Msa0010870 MtrunA17_Chr7g0261971 24.394 578 360 18 305 825 153 710 1.07e-31 134
Msa0010870 MtrunA17_Chr7g0262221 60.931 924 296 6 1 880 536 1438 0.0 1183
Msa0010870 MtrunA17_Chr7g0262221 24.150 588 361 17 305 825 158 727 9.68e-32 134
Msa0010870 MtrunA17_Chr7g0261981 61.155 883 313 3 1 880 553 1408 0.0 1164
Msa0010870 MtrunA17_Chr7g0261981 23.643 571 373 14 305 825 157 714 1.73e-32 136
Msa0010870 MtrunA17_Chr4g0003971 63.750 880 282 4 2 880 553 1396 0.0 1163
Msa0010870 MtrunA17_Chr4g0003971 23.652 575 368 18 305 825 156 713 2.61e-33 139
Msa0010870 MtrunA17_Chr7g0262261 60.291 894 310 3 2 880 525 1388 0.0 1119
Msa0010870 MtrunA17_Chr7g0262261 22.828 587 386 16 289 822 110 682 1.81e-32 136
Msa0010870 MtrunA17_Chr7g0262261 51.111 90 41 1 794 880 1535 1624 5.12e-24 109
Msa0010870 MtrunA17_Chr7g0265981 59.820 891 337 6 2 880 576 1457 0.0 1104
Msa0010870 MtrunA17_Chr7g0265981 23.855 633 401 18 307 876 181 795 2.92e-32 135
Msa0010870 MtrunA17_Chr7g0262251 59.091 880 311 6 2 863 549 1397 0.0 1103
Msa0010870 MtrunA17_Chr7g0262251 25.090 558 357 15 305 822 170 706 4.60e-35 144
Msa0010870 MtrunA17_Chr1g0171351 57.714 901 359 8 2 880 568 1468 0.0 1097
Msa0010870 MtrunA17_Chr1g0171351 23.077 637 389 20 309 872 175 783 1.89e-31 133
Msa0010870 MtrunA17_Chr1g0198291 57.335 893 362 6 2 880 581 1468 0.0 1075
Msa0010870 MtrunA17_Chr1g0198291 23.810 567 365 17 308 822 187 738 6.90e-28 121
Msa0010870 MtrunA17_Chr4g0062871 56.918 889 363 5 1 880 541 1418 0.0 1070
Msa0010870 MtrunA17_Chr4g0062871 23.418 632 407 18 305 876 145 759 1.12e-27 120
Msa0010870 MtrunA17_Chr7g0265971 57.317 902 354 6 2 880 570 1463 0.0 1066
Msa0010870 MtrunA17_Chr7g0265971 25.000 568 359 16 307 822 175 727 9.07e-34 140
Msa0010870 MtrunA17_Chr4g0004021 69.705 713 204 3 2 712 563 1265 0.0 1009
Msa0010870 MtrunA17_Chr4g0004021 22.821 631 411 18 305 876 166 779 6.94e-31 131
Msa0010870 MtrunA17_Chr2g0331081 55.407 897 383 3 1 880 570 1466 0.0 1009
Msa0010870 MtrunA17_Chr2g0331081 24.382 566 363 16 307 821 176 727 7.72e-37 150
Msa0010870 MtrunA17_Chr8g0340651 54.098 915 382 8 1 880 569 1480 0.0 991
Msa0010870 MtrunA17_Chr8g0340651 24.006 629 396 19 307 870 175 786 1.35e-35 146
Msa0010870 MtrunA17_Chr7g0262321 56.614 892 335 10 3 880 278 1131 0.0 973
Msa0010870 MtrunA17_Chr7g0262321 24.661 442 287 12 410 822 17 441 3.88e-20 96.7
Msa0010870 MtrunA17_Chr7g0265961 53.604 888 330 6 2 880 574 1388 0.0 953
Msa0010870 MtrunA17_Chr7g0265961 23.387 620 406 16 308 876 180 781 1.75e-34 142
Msa0010870 MtrunA17_Chr5g0429871 52.531 889 400 5 1 880 370 1245 0.0 942
Msa0010870 MtrunA17_Chr5g0429871 23.764 526 328 12 352 822 21 528 1.85e-33 139
Msa0010870 MtrunA17_Chr0c20g0493841 51.131 884 418 5 1 880 558 1431 0.0 937
Msa0010870 MtrunA17_Chr0c20g0493841 24.515 567 366 15 305 822 163 716 2.52e-37 152
Msa0010870 MtrunA17_Chr3g0104621 50.941 903 420 4 1 880 446 1348 0.0 926
Msa0010870 MtrunA17_Chr3g0104621 25.085 590 368 17 290 822 32 604 3.92e-39 157
Msa0010870 MtrunA17_Chr7g0265991 60.093 644 237 3 257 880 1 644 0.0 815
Msa0010870 MtrunA17_Chr7g0215001 63.830 376 114 1 458 811 1 376 3.04e-178 519
Msa0010870 MtrunA17_Chr4g0069211 51.779 506 233 4 1 505 546 1041 3.23e-170 522
Msa0010870 MtrunA17_Chr4g0069211 24.168 571 352 18 305 822 162 704 5.55e-32 134
Msa0010870 MtrunA17_Chr4g0069221 50.000 376 185 1 508 880 1 376 2.29e-136 411
Msa0010870 MtrunA17_Chr6g0472481 72.470 247 56 1 298 532 1 247 3.17e-121 367
Msa0010870 MtrunA17_Chr7g0266001 53.604 222 96 2 2 218 455 674 6.46e-76 261
Msa0010870 MtrunA17_Chr7g0266001 24.803 633 401 19 304 876 57 674 2.05e-37 150
Msa0010870 MtrunA17_Chr4g0004001 62.069 174 65 1 708 880 15 188 2.65e-72 236
Msa0010870 MtrunA17_Chr7g0238421 48.659 261 91 5 318 577 12 230 4.18e-66 220
Msa0010870 MtrunA17_Chr1g0176441 28.167 600 361 16 277 836 143 712 3.38e-61 221
Msa0010870 MtrunA17_Chr1g0198931 28.893 578 367 15 275 825 66 626 1.36e-59 216
Msa0010870 MtrunA17_Chr1g0176451 27.939 587 360 16 283 836 1 557 5.64e-59 212
Msa0010870 MtrunA17_Chr2g0316301 28.624 545 354 12 310 840 73 596 5.11e-56 204
Msa0010870 MtrunA17_Chr1g0208391 26.109 586 384 12 257 822 50 606 1.28e-53 199
Msa0010870 MtrunA17_Chr4g0050221 28.678 537 349 12 305 822 26 547 6.65e-52 192
Msa0010870 MtrunA17_Chr7g0267971 27.922 616 393 16 253 836 105 701 7.22e-52 194
Msa0010870 MtrunA17_Chr8g0359931 27.778 558 373 12 280 825 34 573 5.38e-51 190
Msa0010870 MtrunA17_Chr1g0200651 24.961 637 408 14 256 848 15 625 1.06e-50 189
Msa0010870 MtrunA17_Chr1g0213091 24.480 625 397 15 259 822 48 658 1.65e-50 190
Msa0010870 MtrunA17_Chr5g0408061 29.072 485 286 14 280 736 44 498 1.77e-50 188
Msa0010870 MtrunA17_Chr8g0390471 79.798 99 20 0 310 408 5 103 5.23e-50 171
Msa0010870 MtrunA17_Chr7g0263351 25.690 580 386 9 280 822 82 653 7.43e-50 188
Msa0010870 MtrunA17_Chr4g0050251 26.134 551 371 12 310 839 73 608 1.86e-49 186
Msa0010870 MtrunA17_Chr4g0039251 28.832 548 325 14 309 816 92 614 4.09e-49 186
Msa0010870 MtrunA17_Chr4g0039261 26.471 612 388 17 309 877 50 642 7.34e-48 181
Msa0010870 MtrunA17_Chr6g0477811 27.207 555 345 15 309 829 65 594 2.09e-47 180
Msa0010870 MtrunA17_Chr3g0102731 27.505 549 346 15 280 792 54 586 2.23e-47 178
Msa0010870 MtrunA17_Chr5g0446901 26.667 555 354 15 277 792 61 601 1.01e-46 177
Msa0010870 MtrunA17_Chr4g0050291 25.613 652 407 22 259 867 10 626 1.46e-44 171
Msa0010870 MtrunA17_Chr4g0050261 24.237 590 374 16 310 839 73 649 1.47e-44 172
Msa0010870 MtrunA17_Chr1g0202431 26.930 531 335 20 310 823 50 544 2.06e-44 170
Msa0010870 MtrunA17_Chr1g0199471 27.447 470 274 13 309 730 516 966 2.18e-44 174
Msa0010870 MtrunA17_Chr7g0264441 26.025 561 338 14 309 818 278 812 7.44e-44 171
Msa0010870 MtrunA17_Chr2g0318061 34.875 281 165 7 281 556 1 268 9.44e-44 163
Msa0010870 MtrunA17_Chr4g0065231 25.405 555 379 14 283 822 44 578 1.28e-42 165
Msa0010870 MtrunA17_Chr8g0384391 23.419 585 394 15 277 830 25 586 2.57e-42 164
Msa0010870 MtrunA17_Chr1g0180971 36.437 247 151 3 307 553 410 650 2.77e-42 166
Msa0010870 MtrunA17_Chr5g0411621 35.531 273 163 5 283 553 25 286 9.12e-41 160
Msa0010870 MtrunA17_Chr4g0028621 26.539 471 280 9 309 725 506 964 1.63e-40 161
Msa0010870 MtrunA17_Chr3g0130331 24.252 602 402 17 259 830 9 586 4.79e-40 157
Msa0010870 MtrunA17_Chr8g0393191 33.099 284 180 5 283 565 43 317 3.27e-39 156
Msa0010870 MtrunA17_Chr8g0393191 22.174 230 163 6 601 825 518 736 2.80e-12 70.9
Msa0010870 MtrunA17_Chr4g0050201 26.273 491 327 14 352 822 5 480 1.60e-36 145
Msa0010870 MtrunA17_Chr4g0026731 23.540 565 373 16 352 867 22 576 1.68e-35 143
Msa0010870 MtrunA17_Chr4g0039231 24.916 598 340 16 370 875 19 599 1.45e-32 134
Msa0010870 MtrunA17_Chr2g0327241 22.847 569 367 18 293 822 111 646 5.81e-28 120
Msa0010870 MtrunA17_Chr8g0390461 38.776 147 78 4 139 280 2 141 5.62e-27 108
Msa0010870 MtrunA17_Chr8g0390481 85.714 56 7 1 440 494 7 62 1.50e-24 97.8
Msa0010870 MtrunA17_Chr3g0093331 33.871 186 119 4 329 511 17 201 1.43e-22 98.2
Msa0010870 MtrunA17_Chr7g0238411 37.500 88 44 2 43 130 27 103 4.10e-13 66.6
Msa0010870 MtrunA17_Chr4g0047831 40.244 82 49 0 427 508 1 82 1.66e-12 64.3
Msa0010870 MtrunA17_Chr7g0261961 60.417 48 19 0 833 880 23 70 3.55e-12 62.4
Msa0010870 MtrunA17_Chr3g0132711 29.474 190 111 7 311 492 210 384 4.57e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010870 AT1G15520.1 66.477 880 277 3 2 880 561 1423 0.0 1245
Msa0010870 AT1G15520.1 22.997 574 374 15 305 825 164 722 3.71e-33 139
Msa0010870 AT2G26910.1 58.286 887 356 5 1 880 541 1420 0.0 1100
Msa0010870 AT2G26910.1 24.451 638 399 20 302 876 142 759 3.25e-35 145
Msa0010870 AT1G66950.1 57.593 889 351 5 2 880 582 1454 0.0 1091
Msa0010870 AT1G66950.1 23.824 638 395 21 307 876 187 801 2.86e-30 129
Msa0010870 AT2G36380.1 57.432 888 355 4 2 880 580 1453 0.0 1077
Msa0010870 AT2G36380.1 23.539 633 403 16 307 876 185 799 1.37e-33 140
Msa0010870 AT3G16340.1 55.982 886 362 4 1 880 553 1416 0.0 1038
Msa0010870 AT3G16340.1 24.645 633 394 21 307 876 159 771 7.37e-35 144
Msa0010870 AT3G16340.2 55.982 886 362 4 1 880 548 1411 0.0 1038
Msa0010870 AT3G16340.2 24.487 633 390 22 307 876 159 766 6.57e-33 138
Msa0010870 AT1G15520.2 68.495 711 207 2 2 712 561 1254 0.0 1027
Msa0010870 AT1G15520.2 22.997 574 374 15 305 825 164 722 9.31e-33 137
Msa0010870 AT1G15210.1 56.659 886 360 4 1 880 575 1442 0.0 1026
Msa0010870 AT1G15210.1 24.912 570 355 16 307 821 181 732 6.26e-37 151
Msa0010870 AT1G59870.1 56.313 895 374 7 1 880 577 1469 0.0 1011
Msa0010870 AT1G59870.1 24.062 640 402 18 301 876 177 796 3.60e-39 158
Msa0010870 AT3G30842.1 54.082 882 388 4 1 880 552 1418 0.0 997
Msa0010870 AT3G30842.1 24.339 567 368 16 305 822 156 710 1.98e-40 162
Msa0010870 AT2G29940.1 53.228 883 387 3 1 880 567 1426 0.0 990
Msa0010870 AT2G29940.1 24.405 672 391 20 237 822 85 725 2.01e-40 162
Msa0010870 AT3G53480.1 48.471 883 441 3 1 880 579 1450 0.0 920
Msa0010870 AT3G53480.1 24.642 629 392 21 305 872 184 791 2.57e-37 152
Msa0010870 AT2G37280.4 48.471 883 439 4 1 880 386 1255 0.0 901
Msa0010870 AT2G37280.4 24.457 552 349 15 323 822 9 544 8.44e-35 144
Msa0010870 AT2G37280.3 48.471 883 439 4 1 880 573 1442 0.0 900
Msa0010870 AT2G37280.3 23.810 609 363 17 298 822 140 731 3.09e-35 145
Msa0010870 AT2G37280.1 48.471 883 439 4 1 880 544 1413 0.0 899
Msa0010870 AT2G37280.1 24.825 572 360 16 304 822 148 702 1.12e-38 156
Msa0010870 AT4G15233.8 47.678 883 424 5 1 880 536 1383 0.0 870
Msa0010870 AT4G15233.8 22.320 569 363 16 307 822 152 694 1.48e-27 121
Msa0010870 AT4G15233.1 47.678 883 424 5 1 880 545 1392 0.0 870
Msa0010870 AT4G15233.1 22.847 569 369 15 307 822 152 703 3.26e-31 132
Msa0010870 AT4G15233.7 47.678 883 424 5 1 880 527 1374 0.0 870
Msa0010870 AT4G15233.7 23.593 551 369 14 307 822 152 685 2.12e-33 139
Msa0010870 AT4G15233.3 47.678 883 424 5 1 880 483 1330 0.0 870
Msa0010870 AT4G15233.3 22.847 569 369 15 307 822 90 641 2.66e-31 133
Msa0010870 AT4G15233.6 47.678 883 424 5 1 880 483 1330 0.0 870
Msa0010870 AT4G15233.6 22.847 569 369 15 307 822 90 641 2.66e-31 133
Msa0010870 AT4G15236.1 47.225 883 428 6 1 880 543 1390 0.0 860
Msa0010870 AT4G15236.1 22.880 625 408 17 305 870 148 757 8.72e-33 137
Msa0010870 AT4G15230.4 46.886 883 438 6 1 880 467 1321 0.0 848
Msa0010870 AT4G15230.4 24.650 572 359 18 305 822 72 625 8.52e-35 144
Msa0010870 AT4G15230.3 46.999 883 437 7 1 880 546 1400 0.0 847
Msa0010870 AT4G15230.3 24.650 572 359 18 305 822 151 704 1.71e-34 143
Msa0010870 AT4G15230.1 46.999 883 437 7 1 880 546 1400 0.0 847
Msa0010870 AT4G15230.1 24.650 572 359 18 305 822 151 704 1.71e-34 143
Msa0010870 AT4G15215.1 46.319 883 443 6 1 880 536 1390 0.0 844
Msa0010870 AT4G15215.1 24.120 568 360 16 305 822 148 694 5.05e-36 148
Msa0010870 AT4G15215.8 46.319 883 443 6 1 880 533 1387 0.0 843
Msa0010870 AT4G15215.8 24.120 568 360 16 305 822 145 691 5.64e-36 148
Msa0010870 AT4G15215.10 46.319 883 443 6 1 880 533 1387 0.0 843
Msa0010870 AT4G15215.10 24.120 568 360 16 305 822 145 691 5.64e-36 148
Msa0010870 AT4G15215.11 46.319 883 443 6 1 880 543 1397 0.0 843
Msa0010870 AT4G15215.11 23.944 568 368 15 305 822 148 701 4.35e-37 151
Msa0010870 AT4G15215.6 46.319 883 443 6 1 880 533 1387 0.0 843
Msa0010870 AT4G15215.6 24.120 568 360 16 305 822 145 691 5.64e-36 148
Msa0010870 AT4G15215.7 46.319 883 443 6 1 880 533 1387 0.0 843
Msa0010870 AT4G15215.7 24.120 568 360 16 305 822 145 691 5.64e-36 148
Msa0010870 AT4G15215.9 46.319 883 443 6 1 880 540 1394 0.0 843
Msa0010870 AT4G15215.9 23.944 568 368 15 305 822 145 698 5.69e-37 151
Msa0010870 AT4G15215.4 46.319 883 443 6 1 880 540 1394 0.0 843
Msa0010870 AT4G15215.4 23.944 568 368 15 305 822 145 698 5.69e-37 151
Msa0010870 AT4G15215.5 46.319 883 443 6 1 880 540 1394 0.0 843
Msa0010870 AT4G15215.5 23.944 568 368 15 305 822 145 698 5.69e-37 151
Msa0010870 AT4G15215.3 46.319 883 443 6 1 880 540 1394 0.0 843
Msa0010870 AT4G15215.3 23.944 568 368 15 305 822 145 698 5.69e-37 151
Msa0010870 AT4G15215.2 46.319 883 443 6 1 880 540 1394 0.0 843
Msa0010870 AT4G15215.2 23.944 568 368 15 305 822 145 698 5.69e-37 151
Msa0010870 AT2G37280.2 49.433 793 388 3 1 793 544 1323 0.0 821
Msa0010870 AT2G37280.2 24.825 572 360 16 304 822 148 702 1.31e-38 156
Msa0010870 AT4G15233.2 47.344 847 387 5 1 823 545 1356 0.0 819
Msa0010870 AT4G15233.2 22.847 569 369 15 307 822 152 703 4.02e-31 132
Msa0010870 AT4G15230.2 48.000 800 387 7 1 799 546 1317 0.0 775
Msa0010870 AT4G15230.2 24.650 572 359 18 305 822 151 704 1.59e-34 143
Msa0010870 AT4G15233.5 53.509 570 262 1 314 880 680 1249 0.0 647
Msa0010870 AT4G15233.5 41.935 217 125 1 1 217 465 680 2.97e-51 196
Msa0010870 AT4G15233.5 23.593 551 369 14 307 822 90 623 1.55e-33 140
Msa0010870 AT4G15233.4 53.509 570 262 1 314 880 680 1249 0.0 647
Msa0010870 AT4G15233.4 41.935 217 125 1 1 217 465 680 2.97e-51 196
Msa0010870 AT4G15233.4 23.593 551 369 14 307 822 90 623 1.55e-33 140
Msa0010870 AT3G25620.2 29.215 599 376 16 254 822 37 617 1.98e-59 215
Msa0010870 AT2G01320.8 27.174 552 357 11 310 835 90 622 1.02e-57 210
Msa0010870 AT2G01320.5 27.174 552 357 11 310 835 90 622 1.02e-57 210
Msa0010870 AT2G01320.2 27.013 559 365 10 310 844 90 629 1.44e-57 211
Msa0010870 AT3G55100.1 24.315 584 399 9 276 835 15 579 1.49e-57 210
Msa0010870 AT3G55100.2 24.315 584 399 9 276 835 15 579 1.49e-57 210
Msa0010870 AT2G01320.3 27.013 559 365 10 310 844 90 629 1.88e-57 211
Msa0010870 AT2G01320.1 27.013 559 365 10 310 844 90 629 2.12e-57 211
Msa0010870 AT2G01320.4 27.013 559 365 10 310 844 90 629 2.12e-57 211
Msa0010870 AT5G06530.2 28.056 638 379 18 258 846 131 737 7.37e-57 209
Msa0010870 AT5G06530.1 28.056 638 379 18 258 846 131 737 7.37e-57 209
Msa0010870 AT3G55130.1 25.041 607 399 13 280 854 70 652 1.65e-54 202
Msa0010870 AT5G06530.3 28.571 581 343 15 258 795 131 682 3.01e-54 201
Msa0010870 AT2G37360.1 26.481 574 382 9 280 822 95 659 6.65e-54 201
Msa0010870 AT4G27420.1 27.674 589 386 17 279 847 33 601 1.10e-53 198
Msa0010870 AT3G55090.1 23.195 651 421 13 250 851 40 660 1.67e-53 199
Msa0010870 AT5G13580.1 25.169 592 395 11 280 835 65 644 7.72e-52 194
Msa0010870 AT2G01320.7 29.204 452 281 9 310 741 90 522 3.16e-51 189
Msa0010870 AT2G01320.6 29.204 452 281 9 310 741 90 522 3.16e-51 189
Msa0010870 AT3G55110.1 23.481 609 405 14 280 857 60 638 3.96e-51 192
Msa0010870 AT3G21090.1 27.152 604 388 15 309 874 44 633 1.55e-50 190
Msa0010870 AT1G53270.1 26.493 536 329 10 310 822 50 543 4.62e-50 187
Msa0010870 AT2G39350.1 23.802 605 401 10 280 835 64 657 1.46e-49 188
Msa0010870 AT3G13220.1 25.812 585 375 14 280 825 62 626 2.88e-49 186
Msa0010870 AT1G17840.1 28.034 585 346 19 283 829 50 597 5.37e-49 186
Msa0010870 AT1G71960.1 29.569 487 294 13 280 733 37 507 5.88e-49 185
Msa0010870 AT3G25620.1 32.311 424 246 13 254 647 37 449 6.71e-49 181
Msa0010870 AT1G31770.1 27.686 484 318 12 269 736 39 506 1.68e-48 183
Msa0010870 AT3G53510.1 25.345 580 396 11 310 873 126 684 3.73e-48 184
Msa0010870 AT1G53390.1 28.138 494 275 17 281 725 505 967 2.54e-47 183
Msa0010870 AT5G06530.4 27.129 505 314 10 327 795 1 487 6.90e-47 175
Msa0010870 AT2G13610.1 25.214 583 376 16 279 832 40 591 7.42e-47 178
Msa0010870 AT1G51500.1 26.446 605 393 18 309 874 43 634 5.90e-46 176
Msa0010870 AT4G25750.1 26.742 531 328 19 310 825 30 514 7.10e-46 174
Msa0010870 AT5G52860.1 26.565 527 326 17 310 823 44 522 1.67e-44 170
Msa0010870 AT1G51460.1 28.494 551 333 16 309 816 29 561 1.42e-41 163
Msa0010870 AT2G37010.2 25.494 557 344 14 309 821 499 1028 3.41e-41 164
Msa0010870 AT2G37010.1 25.494 557 344 14 309 821 499 1028 3.41e-41 164
Msa0010870 AT5G60740.1 27.801 482 255 13 309 725 514 967 1.38e-38 156
Msa0010870 AT5G19410.2 24.908 542 366 14 310 835 75 591 1.02e-35 144
Msa0010870 AT5G19410.1 24.723 542 367 14 310 835 66 582 1.06e-35 144
Msa0010870 AT2G28070.2 21.860 613 422 18 236 822 72 653 1.79e-24 110
Msa0010870 AT2G28070.1 21.860 613 422 18 236 822 72 653 1.79e-24 110
Msa0010870 AT3G47750.1 30.573 157 97 6 313 466 638 785 2.09e-11 68.6
Msa0010870 AT3G47730.1 28.877 187 116 6 311 492 547 721 7.22e-11 66.6

Find 188 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTTGGCCTGATATTT+TGG 0.064855 1_1:-16436972 Msa0010870:CDS
TCAAGGTACCTTCCAATATT+TGG 0.098023 1_1:+16439792 None:intergenic
TCAGCTGCTACTTCTGAAAT+TGG 0.136581 1_1:-16437612 Msa0010870:intron
GTCTGCGTTATTTCGGTTTA+TGG 0.198480 1_1:-16439646 Msa0010870:CDS
ACTACTTGCTCTTACTGTTT+TGG 0.202865 1_1:-16439574 Msa0010870:CDS
CCCAATGTTTCATTGGAATT+AGG 0.212431 1_1:+16439139 None:intergenic
GCAACTTCAATGATAGTTAT+TGG 0.226588 1_1:+16439855 None:intergenic
TATGCTGCTGTTACCTTCAT+AGG 0.240386 1_1:-16436790 Msa0010870:CDS
TTATAACCATCTTTGATCTT+AGG 0.264625 1_1:+16437424 None:intergenic
TTGGTTCAAGCTGTTGTATA+TGG 0.273066 1_1:-16436164 Msa0010870:CDS
AGGAGTACTAACAGCTCTTA+TGG 0.273999 1_1:-16438336 Msa0010870:CDS
GGAAACAACATTTATCATAT+TGG 0.292807 1_1:-16437047 Msa0010870:CDS
CATTAGAGGATGTGCATAAA+TGG 0.292953 1_1:-16439370 Msa0010870:intron
ATTGGCTTTGACCCAAATAT+TGG 0.293514 1_1:-16439804 Msa0010870:CDS
TCCCTCAAGCTTATTGGTAT+TGG 0.304856 1_1:-16439087 Msa0010870:CDS
GTTCTCTCAATTGCTACTAT+TGG 0.306445 1_1:+16436742 None:intergenic
CTAGTTGAGCGATCGACTTC+AGG 0.306760 1_1:+16438101 None:intergenic
AATGGTTTCTTTGGGGTTAT+TGG 0.309634 1_1:-16439352 Msa0010870:CDS
ATAGCTGTGAATGAATTTCT+TGG 0.311083 1_1:-16439299 Msa0010870:CDS
ATGTGCATAAATGGTTTCTT+TGG 0.311277 1_1:-16439361 Msa0010870:CDS
CAAGGTACCTTCCAATATTT+GGG 0.317610 1_1:+16439793 None:intergenic
TTCTTATACTATACATACTA+TGG 0.326457 1_1:-16436062 Msa0010870:CDS
CGCCAACGCCCCAAAATATC+AGG 0.328024 1_1:+16436962 None:intergenic
ACCTTCATAGGGGTTGTAAA+TGG 0.328796 1_1:-16436778 Msa0010870:CDS
AAAACATTCGCTCGCATATT+GGG 0.332483 1_1:-16438206 Msa0010870:CDS
CATTAATAATCACAGTAAAA+AGG 0.337646 1_1:-16436845 Msa0010870:intron
AGATGGCGTCTGCGTTATTT+CGG 0.339586 1_1:-16439653 Msa0010870:CDS
TGTGCATAAATGGTTTCTTT+GGG 0.341235 1_1:-16439360 Msa0010870:CDS
TATCATTGAAGTTGCCATTT+GGG 0.342696 1_1:-16439847 Msa0010870:CDS
TATTGGTATTGGATTGGAAT+TGG 0.345237 1_1:-16439076 Msa0010870:CDS
AAAGGGTTGAAGAATTTGTT+AGG 0.345327 1_1:-16435697 Msa0010870:CDS
CCACCTCATTCTATGCAATA+TGG 0.349574 1_1:-16435989 Msa0010870:CDS
TGTTCATGTTGTGTCCATAT+TGG 0.356943 1_1:+16435735 None:intergenic
ATTGTAGTGGCCAACACATT+TGG 0.361218 1_1:-16439606 Msa0010870:CDS
ATGCCAGCAACATGTGGATT+TGG 0.364822 1_1:+16436017 None:intergenic
TTTCGGTTTATGGCAGCATT+AGG 0.365866 1_1:-16439636 Msa0010870:CDS
TCATTAAGAGAAGCACTTGT+TGG 0.366983 1_1:-16437939 Msa0010870:CDS
CCTGTTGCATGGACCTTGAA+TGG 0.367493 1_1:-16435770 Msa0010870:CDS
ATTTCCAACATCCATGTTGC+AGG 0.370680 1_1:+16437400 None:intergenic
CGATACTCCCAATGTTTCAT+TGG 0.370803 1_1:+16439132 None:intergenic
TCTCTTTGCTTGTAAAAGAT+AGG 0.371953 1_1:+16439933 None:intergenic
CGATCTGATTGAGTACTTTG+AGG 0.374293 1_1:-16437546 Msa0010870:intron
CTATCATTGAAGTTGCCATT+TGG 0.374934 1_1:-16439848 Msa0010870:CDS
GGATTGGTGACTTCCCAATA+TGG 0.375732 1_1:-16435749 Msa0010870:CDS
TATGGTGGAAATGGTACTAT+TGG 0.381479 1_1:-16435799 Msa0010870:CDS
CAAGATTTATTCAATGCAAT+GGG 0.382322 1_1:-16436820 Msa0010870:CDS
TTTGCACTTATCTTCACCTT+TGG 0.384316 1_1:-16435605 Msa0010870:CDS
CAGATATACGCTGGTCCAAT+AGG 0.385688 1_1:-16437581 Msa0010870:CDS
TCGGAACAGTGGTCGCCTAT+TGG 0.387035 1_1:+16437566 None:intergenic
GTTCATGTTGTGTCCATATT+GGG 0.387495 1_1:+16435736 None:intergenic
TAGTACCATTTCCACCATAT+TGG 0.389489 1_1:+16435803 None:intergenic
ATAATGACCGGTATATTGTT+TGG 0.398657 1_1:-16436985 Msa0010870:CDS
GCTAGCAGTAGTGGAAGAAA+AGG 0.405961 1_1:-16438657 Msa0010870:CDS
CAAGCTTATTGGTATTGGAT+TGG 0.406340 1_1:-16439082 Msa0010870:CDS
TACCGGTCATTATAGTAAAT+AGG 0.410616 1_1:+16436995 None:intergenic
ATGCTGCTGTTACCTTCATA+GGG 0.412546 1_1:-16436789 Msa0010870:CDS
CACAATGTATAGCTTGTTTG+TGG 0.415149 1_1:-16437068 Msa0010870:CDS
GATTCATAAACTGTAACATT+AGG 0.416530 1_1:+16438155 None:intergenic
CATAGAACTTCCCCACATCT+TGG 0.416674 1_1:-16436183 Msa0010870:CDS
GATGTTTATTGAGGAAGTTA+TGG 0.419820 1_1:-16437979 Msa0010870:CDS
CCATTCAAGGTCCATGCAAC+AGG 0.425055 1_1:+16435770 None:intergenic
AATACCTGTGCAAGAGCATA+TGG 0.427325 1_1:+16436676 None:intergenic
TGGTCGTCGCCATTGATGTA+TGG 0.428069 1_1:-16439332 Msa0010870:CDS
GAGAAGGAACACTAAGCTCT+TGG 0.428866 1_1:+16437142 None:intergenic
ACTCCAAATCCACATGTTGC+TGG 0.429832 1_1:-16436020 Msa0010870:CDS
GAATACCAATATGGTGGAAA+TGG 0.431960 1_1:-16435808 Msa0010870:CDS
GGAGTACTAACAGCTCTTAT+GGG 0.432309 1_1:-16438335 Msa0010870:CDS
CCTAATTCCAATGAAACATT+GGG 0.432343 1_1:-16439139 Msa0010870:CDS
GAAGCACTTGTTGGATTGCC+AGG 0.432435 1_1:-16437930 Msa0010870:CDS
GAATCCATCGATAATATTCA+TGG 0.433230 1_1:-16437847 Msa0010870:CDS
TTTGGGGCGTTGGCGCGAAA+AGG 0.437367 1_1:-16436954 Msa0010870:intron
CTTATCTCAAGAGAAATTGC+AGG 0.439884 1_1:-16438867 Msa0010870:CDS
AACATGTGGATTTGGAGTTA+TGG 0.448272 1_1:+16436025 None:intergenic
CTGAGGGATAGAGGTTGAAA+AGG 0.449181 1_1:+16438624 None:intergenic
CAGCTGCTACTTCTGAAATT+GGG 0.452289 1_1:-16437611 Msa0010870:CDS
ATTGGAATTGGAGCTTTGAT+TGG 0.452326 1_1:-16439064 Msa0010870:CDS
TGGTTCAAGCTGTTGTATAT+GGG 0.452429 1_1:-16436163 Msa0010870:CDS
GAATTTGTTAGGAATTACTT+TGG 0.453039 1_1:-16435686 Msa0010870:CDS
AGGAAAAGAGGCAAATCTTA+AGG 0.463908 1_1:-16437368 Msa0010870:CDS
TCCTAATTCCAATGAAACAT+TGG 0.465001 1_1:-16439140 Msa0010870:CDS
AATGGCAGAGAATACCAATA+TGG 0.472097 1_1:-16435817 Msa0010870:intron
TTCTACAGAGAAAGAGCTGC+AGG 0.473026 1_1:-16436715 Msa0010870:CDS
TCCAATACCAATAAGCTTGA+GGG 0.475720 1_1:+16439086 None:intergenic
ATAAGAGCTGTTAGTACTCC+TGG 0.476561 1_1:+16438338 None:intergenic
TCTTGGACATGGTTGGAGAA+AGG 0.478610 1_1:-16439282 Msa0010870:intron
AAAACTAGTGGATATATTGA+AGG 0.485153 1_1:-16438263 Msa0010870:CDS
GTCACAGTAGCAATGTTCAA+TGG 0.494283 1_1:-16439990 Msa0010870:CDS
ATTGGATTTGTCCTGTTGCA+TGG 0.496066 1_1:-16435781 Msa0010870:CDS
GCAAGATTTATTCAATGCAA+TGG 0.500297 1_1:-16436821 Msa0010870:CDS
CACACTTGACAATGGTCAAA+GGG 0.501753 1_1:-16435714 Msa0010870:CDS
GATCATAGTATATGCCATGA+TGG 0.503566 1_1:-16436141 Msa0010870:CDS
TTAGGTGTAACTCACAGATA+AGG 0.505524 1_1:+16435941 None:intergenic
TGCATCTCTTACTACGCCAT+TGG 0.505723 1_1:-16439822 Msa0010870:CDS
CTTATGGGTATAAGTGGTGC+TGG 0.507028 1_1:-16438320 Msa0010870:CDS
TTCATGGATGAACCAACCTC+TGG 0.510856 1_1:-16437831 Msa0010870:CDS
GTTGAAAGTCCACTCTCGCC+TGG 0.511181 1_1:+16437912 None:intergenic
CAACAATTGCAACCACTCCT+AGG 0.513061 1_1:+16435648 None:intergenic
CAAAAGTTCGAGACGATCCT+CGG 0.515276 1_1:+16438385 None:intergenic
GCGTCAAATATATCTATACT+TGG 0.516815 1_1:+16437720 None:intergenic
GAATAATGAAGCCTGAGAAA+AGG 0.516857 1_1:+16435964 None:intergenic
TAGGTGTAACTCACAGATAA+GGG 0.517022 1_1:+16435942 None:intergenic
TGAGATGCAGATGTTTATTG+AGG 0.517449 1_1:-16437988 Msa0010870:intron
TGAATACAATAGGCTATTCA+AGG 0.517533 1_1:-16437451 Msa0010870:intron
TCATCAAAACTGAGGGATAG+AGG 0.520684 1_1:+16438615 None:intergenic
ACCATTTACAACCCCTATGA+AGG 0.523911 1_1:+16436777 None:intergenic
GGAGGATTTGTTATTTCAAG+AGG 0.524012 1_1:-16439552 Msa0010870:intron
AACAACATTTATCATATTGG+AGG 0.526283 1_1:-16437044 Msa0010870:CDS
CTCCTATTTACTATAATGAC+CGG 0.528662 1_1:-16436997 Msa0010870:CDS
ATGTTGGAAATTACGTCAGC+AGG 0.528711 1_1:-16437388 Msa0010870:CDS
AATCTTTGCTATATTCTGCA+TGG 0.531112 1_1:-16438136 Msa0010870:CDS
GGAAGTCACCAATCCATTCA+AGG 0.531272 1_1:+16435757 None:intergenic
GTAAGAGATGCATTCCCAAA+TGG 0.532442 1_1:+16439833 None:intergenic
TAATCCTGCAACATGGATGT+TGG 0.532590 1_1:-16437404 Msa0010870:CDS
AGTCGATCGCTCAACTAGAA+AGG 0.533548 1_1:-16438096 Msa0010870:intron
TGCTGGAAAGACTACTCTAA+TGG 0.537176 1_1:-16438303 Msa0010870:CDS
ATATATCTATACTTGGCTGA+TGG 0.538406 1_1:+16437727 None:intergenic
GGTTTATGGCAGCATTAGGA+AGG 0.541213 1_1:-16439632 Msa0010870:CDS
GAAGGAAGCATCACAATAGC+CGG 0.541263 1_1:-16438245 Msa0010870:CDS
CACAGTACGTCCTGTGTCCA+CGG 0.541483 1_1:+16437761 None:intergenic
TGTCTTTGCAGCATTCAGAA+AGG 0.546428 1_1:-16438900 Msa0010870:intron
GGAGTTCCTAAGATCAAAGA+TGG 0.547330 1_1:-16437430 Msa0010870:CDS
ATCCAATACCAATAAGCTTG+AGG 0.556389 1_1:+16439085 None:intergenic
GATAATATGCCAGCAACATG+TGG 0.557494 1_1:+16436011 None:intergenic
ATGAATTTCTTGGACATGGT+TGG 0.558558 1_1:-16439289 Msa0010870:CDS
TATCAGGCCAAACAATATAC+CGG 0.559518 1_1:+16436978 None:intergenic
TGCTACTTCTGAAATTGGGA+GGG 0.560556 1_1:-16437607 Msa0010870:CDS
TCATCCATGAATATTATCGA+TGG 0.562283 1_1:+16437843 None:intergenic
GAAAATTCTTACCTCATCAA+AGG 0.564517 1_1:+16437698 None:intergenic
GCTACTTCTGAAATTGGGAG+GGG 0.567895 1_1:-16437606 Msa0010870:CDS
GTTGAATGCTTTGATACCAA+AGG 0.570906 1_1:+16435589 None:intergenic
AATATTTGGGTCAAAGCCAA+TGG 0.571211 1_1:+16439806 None:intergenic
AATTACGTCAGCAGGAAAAG+AGG 0.571244 1_1:-16437380 Msa0010870:CDS
GTTGGATTGCCAGGCGAGAG+TGG 0.571903 1_1:-16437921 Msa0010870:CDS
ACGCCATCTGATTAATGCAT+AGG 0.575515 1_1:+16439667 None:intergenic
ACAGCTCTTATGGGTATAAG+TGG 0.575581 1_1:-16438326 Msa0010870:CDS
GCTTTGACCCAAATATTGGA+AGG 0.578074 1_1:-16439800 Msa0010870:intron
GGGCTTATTCTCTTCCACCA+TGG 0.578746 1_1:-16439890 Msa0010870:CDS
ATCATAGTATATGCCATGAT+GGG 0.579894 1_1:-16436140 Msa0010870:CDS
ATATAGGGAGTGAAAAGTCA+AGG 0.580011 1_1:-16438413 Msa0010870:intron
TGAACATGACTTCCTAGGAG+TGG 0.581126 1_1:-16435660 Msa0010870:CDS
AGGAGTGGTTGCAATTGTTG+TGG 0.583205 1_1:-16435645 Msa0010870:CDS
AGGGGTTGTAAATGGTGCCT+CGG 0.587490 1_1:-16436770 Msa0010870:CDS
ACACACTTGACAATGGTCAA+AGG 0.589771 1_1:-16435715 Msa0010870:CDS
TGCATGGACCTTGAATGGAT+TGG 0.590662 1_1:-16435765 Msa0010870:CDS
AACAGCTTGAACCAAGATGT+GGG 0.591715 1_1:+16436172 None:intergenic
TTTGATATCATCAAAACTGA+GGG 0.592217 1_1:+16438608 None:intergenic
CAGTAGTGGAAGAAAAGGAA+TGG 0.592511 1_1:-16438652 Msa0010870:CDS
GGCAGAGAATACCAATATGG+TGG 0.594386 1_1:-16435814 Msa0010870:intron
GAAAACAAAGCTAGCAGTAG+TGG 0.595836 1_1:-16438666 Msa0010870:CDS
ACAAAGATGGATGAAGCAGT+TGG 0.595919 1_1:-16438690 Msa0010870:CDS
AGTCCTATGCATTAATCAGA+TGG 0.595979 1_1:-16439670 Msa0010870:CDS
TCTAAAGGACTCACTAGAAG+AGG 0.596533 1_1:+16438793 None:intergenic
GTGAATGAATTTCTTGGACA+TGG 0.598840 1_1:-16439293 Msa0010870:CDS
TATATTTGACGCCTTTGATG+AGG 0.599328 1_1:-16437709 Msa0010870:intron
GCATTCAGAAAGGATCAAGC+AGG 0.599799 1_1:-16438890 Msa0010870:CDS
ATTTGATATCATCAAAACTG+AGG 0.604736 1_1:+16438607 None:intergenic
CTGCTACTTCTGAAATTGGG+AGG 0.605948 1_1:-16437608 Msa0010870:CDS
TGTCCACTCAAATCCCATCA+TGG 0.606589 1_1:+16436127 None:intergenic
GTGCATAAATGGTTTCTTTG+GGG 0.608849 1_1:-16439359 Msa0010870:CDS
CTCAAAGTACTCAATCAGAT+CGG 0.609339 1_1:+16437547 None:intergenic
CAACAGCTTGAACCAAGATG+TGG 0.610125 1_1:+16436171 None:intergenic
GTTTATGGCAGCATTAGGAA+GGG 0.610521 1_1:-16439631 Msa0010870:CDS
TATGCCATATGCTCTTGCAC+AGG 0.612244 1_1:-16436680 Msa0010870:intron
GCACCATATTGCATAGAATG+AGG 0.612531 1_1:+16435986 None:intergenic
GTAAGGAACACCGTGGACAC+AGG 0.613149 1_1:-16437771 Msa0010870:CDS
TGAAAATGTTCCAAATGTGT+TGG 0.615705 1_1:+16439596 None:intergenic
GGAAGAGAATAAGCCCATGA+AGG 0.624504 1_1:+16439897 None:intergenic
CCATATTGCATAGAATGAGG+TGG 0.626247 1_1:+16435989 None:intergenic
ATATTCTGTTGACATGCCAC+AGG 0.634473 1_1:-16438586 Msa0010870:intron
ATGGTTATAATCCTGCAACA+TGG 0.635121 1_1:-16437411 Msa0010870:CDS
AACATGAACACACTTGACAA+TGG 0.635524 1_1:-16435722 Msa0010870:CDS
TGCTCTAGCATCAAGTCCAG+AGG 0.639684 1_1:+16437815 None:intergenic
CTAGCATCAAGTCCAGAGGT+TGG 0.639863 1_1:+16437819 None:intergenic
ATTAGGAAGGGATATTGTAG+TGG 0.647301 1_1:-16439619 Msa0010870:CDS
ATACTATGGTATGATGACAA+TGG 0.651111 1_1:-16436048 Msa0010870:CDS
GGAGGGGAGCAGATATACGC+TGG 0.653420 1_1:-16437590 Msa0010870:CDS
CAATTGTAATGAGAACAGTA+AGG 0.662386 1_1:-16437788 Msa0010870:CDS
ATGCCATGATGGGATTTGAG+TGG 0.663142 1_1:-16436130 Msa0010870:CDS
GAAAAGTCAAGGAGTTTCCG+AGG 0.664009 1_1:-16438402 Msa0010870:CDS
TGCTACTATTGGTTGTACCG+AGG 0.671410 1_1:+16436753 None:intergenic
TGCTGCTGTTACCTTCATAG+GGG 0.677062 1_1:-16436788 Msa0010870:CDS
CGTGGACACAGGACGTACTG+TGG 0.685468 1_1:-16437760 Msa0010870:CDS
ACTCAATCAGATCGGAACAG+TGG 0.688149 1_1:+16437555 None:intergenic
GTATCGATACTGAAATCTCG+CGG 0.706769 1_1:-16439115 Msa0010870:CDS
AAGATTTATTCAATGCAATG+GGG 0.709593 1_1:-16436819 Msa0010870:CDS
ACAGCTTGAACCAAGATGTG+GGG 0.710152 1_1:+16436173 None:intergenic
GTTGAGCGATCGACTTCAGG+CGG 0.723649 1_1:+16438104 None:intergenic
GAGAACAGTAAGGAACACCG+TGG 0.806802 1_1:-16437778 Msa0010870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAACATTAAAAACAAAA+GGG + chr1_1:16436337-16436356 None:intergenic 10.0%
!! ATAAAAACATTAAAAACAAA+AGG + chr1_1:16436338-16436357 None:intergenic 10.0%
!! AAAAACATTAAAAACAAAAG+GGG + chr1_1:16436336-16436355 None:intergenic 15.0%
!! TAAATGATAAAAAAATCATG+TGG + chr1_1:16436659-16436678 None:intergenic 15.0%
!! ACAATACTAATTTACATAAA+TGG - chr1_1:16437090-16437109 Msa0010870:CDS 15.0%
!! AATTTACATAAATGGAAATA+AGG - chr1_1:16437098-16437117 Msa0010870:CDS 15.0%
!!! ACTGAAATTTAATATTTTGA+AGG - chr1_1:16438358-16438377 Msa0010870:CDS 15.0%
!! TGATTATTAATGATATAACA+TGG + chr1_1:16438732-16438751 None:intergenic 15.0%
!! ATAACAATGAAAATGAATAA+TGG + chr1_1:16438942-16438961 None:intergenic 15.0%
!! ATCATATAATAGATGTTATT+AGG + chr1_1:16439678-16439697 None:intergenic 15.0%
!!! ACTTTAAAAATTGATAACAA+TGG - chr1_1:16439750-16439769 Msa0010870:intron 15.0%
!!! TTTCATATGATTTAGTTTCA+AGG + chr1_1:16435813-16435832 None:intergenic 20.0%
!! TAGTTGTTTATTTGTATTTG+AGG - chr1_1:16436108-16436127 Msa0010870:CDS 20.0%
!! ATGTACTAGATAAGTAAAAA+TGG - chr1_1:16436131-16436150 Msa0010870:CDS 20.0%
!! TAAGAAAGATTCAATACATT+AGG + chr1_1:16436176-16436195 None:intergenic 20.0%
!!! ATTTAATTTTCTCTTTGCAT+TGG - chr1_1:16436556-16436575 Msa0010870:intron 20.0%
!! TCATCAAAATCATTATGTTA+TGG + chr1_1:16436865-16436884 None:intergenic 20.0%
!!! TGTCTATATGTTGATTATAT+AGG - chr1_1:16437156-16437175 Msa0010870:CDS 20.0%
!!! GTCTATATGTTGATTATATA+GGG - chr1_1:16437157-16437176 Msa0010870:CDS 20.0%
!!! TTTTCTTTGTTTCAAATTAG+AGG - chr1_1:16437520-16437539 Msa0010870:intron 20.0%
!! TGTAGTACTTAAAAACAAAA+TGG + chr1_1:16437918-16437937 None:intergenic 20.0%
!!! AAAATATGTGAGTTTTTACT+AGG + chr1_1:16438291-16438310 None:intergenic 20.0%
!!! ATATCTTTATTCTTTTGAAC+CGG - chr1_1:16438312-16438331 Msa0010870:CDS 20.0%
!! AATTATTAAAACAGAAAGTC+CGG + chr1_1:16438334-16438353 None:intergenic 20.0%
!! CAAAATATTAAATTTCAGTG+AGG + chr1_1:16438357-16438376 None:intergenic 20.0%
!! ATTAATGATATAACATGGTA+AGG + chr1_1:16438727-16438746 None:intergenic 20.0%
!! CATTAATAATCACAGTAAAA+AGG - chr1_1:16438740-16438759 Msa0010870:intron 20.0%
!!! TTTTCTATTATGAAATGCAT+AGG - chr1_1:16439139-16439158 Msa0010870:CDS 20.0%
!! TTTCTATTATGAAATGCATA+GGG - chr1_1:16439140-16439159 Msa0010870:CDS 20.0%
!! AATGTTGCATTTAAATAATC+CGG - chr1_1:16439183-16439202 Msa0010870:intron 20.0%
!!! TTTTGTGTATTATTTATCGA+CGG + chr1_1:16439268-16439287 None:intergenic 20.0%
!! AATTGTTTATTATGAATTGC+AGG - chr1_1:16439375-16439394 Msa0010870:intron 20.0%
!! TTCTTATACTATACATACTA+TGG - chr1_1:16439523-16439542 Msa0010870:intron 20.0%
!! ATAATAGATGTTATTAGGAA+AGG + chr1_1:16439673-16439692 None:intergenic 20.0%
!! TGATAGTTATTGGTATTTTG+AGG + chr1_1:16435723-16435742 None:intergenic 25.0%
! TTATAGTGTAACTCTAAACT+TGG - chr1_1:16436063-16436082 Msa0010870:CDS 25.0%
!!! ACATTGTTATTTTGCATTAG+AGG - chr1_1:16436201-16436220 Msa0010870:intron 25.0%
! TAGTTAAGAAATCTTCTGAT+AGG - chr1_1:16436357-16436376 Msa0010870:intron 25.0%
! TAAATTTCCTTGAATGTTAC+AGG - chr1_1:16436418-16436437 Msa0010870:intron 25.0%
! GATAAAAAAATCATGTGGTA+AGG + chr1_1:16436654-16436673 None:intergenic 25.0%
! TAAGTACATTAACTATGTCT+TGG + chr1_1:16436819-16436838 None:intergenic 25.0%
! TGAAAAATCAGATACAAAGA+TGG - chr1_1:16436882-16436901 Msa0010870:intron 25.0%
! TTTGATATCATCAAAACTGA+GGG + chr1_1:16436980-16436999 None:intergenic 25.0%
! ATTTGATATCATCAAAACTG+AGG + chr1_1:16436981-16437000 None:intergenic 25.0%
! TGTTGATATCTTAACTAGAA+AGG + chr1_1:16437027-16437046 None:intergenic 25.0%
! AACATATAGACAAAATGCTA+TGG + chr1_1:16437148-16437167 None:intergenic 25.0%
!! AAAACTAGTGGATATATTGA+AGG - chr1_1:16437322-16437341 Msa0010870:intron 25.0%
! GATTCATAAACTGTAACATT+AGG + chr1_1:16437433-16437452 None:intergenic 25.0%
! TTATAACCATCTTTGATCTT+AGG + chr1_1:16438164-16438183 None:intergenic 25.0%
!!! ACTAGTATTTTCCATTTTTC+AGG - chr1_1:16438403-16438422 Msa0010870:CDS 25.0%
!! TGTTTATTTCTCCTGAAAAA+TGG + chr1_1:16438417-16438436 None:intergenic 25.0%
! GGAAACAACATTTATCATAT+TGG - chr1_1:16438538-16438557 Msa0010870:intron 25.0%
! AACAACATTTATCATATTGG+AGG - chr1_1:16438541-16438560 Msa0010870:intron 25.0%
! CAAGATTTATTCAATGCAAT+GGG - chr1_1:16438765-16438784 Msa0010870:intron 25.0%
! AAGATTTATTCAATGCAATG+GGG - chr1_1:16438766-16438785 Msa0010870:intron 25.0%
! ATGAATCGTTAAGTAGATAT+TGG - chr1_1:16438979-16438998 Msa0010870:intron 25.0%
! TTAAACCGTTTATCTAAACA+TGG - chr1_1:16439723-16439742 Msa0010870:intron 25.0%
! TTAGACCATGTTTAGATAAA+CGG + chr1_1:16439731-16439750 None:intergenic 25.0%
!!! GAATTTGTTAGGAATTACTT+TGG - chr1_1:16439899-16439918 Msa0010870:CDS 25.0%
TCTCTTTGCTTGTAAAAGAT+AGG + chr1_1:16435655-16435674 None:intergenic 30.0%
! ATCTTCTTTTCTATCCTTCA+TGG - chr1_1:16435674-16435693 Msa0010870:CDS 30.0%
! TCTTCTTTTCTATCCTTCAT+GGG - chr1_1:16435675-16435694 Msa0010870:CDS 30.0%
GCAACTTCAATGATAGTTAT+TGG + chr1_1:16435733-16435752 None:intergenic 30.0%
! TATCATTGAAGTTGCCATTT+GGG - chr1_1:16435738-16435757 Msa0010870:CDS 30.0%
CATATGAAACTTTCTTAGCT+AGG - chr1_1:16435824-16435843 Msa0010870:intron 30.0%
AGCCTAATGATAAATCTGAT+TGG - chr1_1:16435868-16435887 Msa0010870:intron 30.0%
TGCCAATCAGATTTATCATT+AGG + chr1_1:16435873-16435892 None:intergenic 30.0%
TAATGATAAATCTGATTGGC+AGG - chr1_1:16435872-16435891 Msa0010870:intron 30.0%
TGAAAATGTTCCAAATGTGT+TGG + chr1_1:16435992-16436011 None:intergenic 30.0%
ATGTGCATAAATGGTTTCTT+TGG - chr1_1:16436224-16436243 Msa0010870:intron 30.0%
TGTGCATAAATGGTTTCTTT+GGG - chr1_1:16436225-16436244 Msa0010870:intron 30.0%
ATAGCTGTGAATGAATTTCT+TGG - chr1_1:16436286-16436305 Msa0010870:intron 30.0%
ACATTAAAAACAAAAGGGGT+TGG + chr1_1:16436332-16436351 None:intergenic 30.0%
ATAGGCAATTCAATGATCTT+TGG - chr1_1:16436375-16436394 Msa0010870:intron 30.0%
TCCTAATTCCAATGAAACAT+TGG - chr1_1:16436445-16436464 Msa0010870:intron 30.0%
CCTAATTCCAATGAAACATT+GGG - chr1_1:16436446-16436465 Msa0010870:intron 30.0%
! TATTGGTATTGGATTGGAAT+TGG - chr1_1:16436509-16436528 Msa0010870:intron 30.0%
TAACTATGTCTTGGATCTAA+AGG + chr1_1:16436810-16436829 None:intergenic 30.0%
!!! GCGAATGTTTTTTGATTCTT+CGG + chr1_1:16437370-16437389 None:intergenic 30.0%
! AATCTTTGCTATATTCTGCA+TGG - chr1_1:16437449-16437468 Msa0010870:intron 30.0%
GATGTTTATTGAGGAAGTTA+TGG - chr1_1:16437606-16437625 Msa0010870:CDS 30.0%
GAATCCATCGATAATATTCA+TGG - chr1_1:16437738-16437757 Msa0010870:CDS 30.0%
TCATCCATGAATATTATCGA+TGG + chr1_1:16437745-16437764 None:intergenic 30.0%
CAATTGTAATGAGAACAGTA+AGG - chr1_1:16437797-16437816 Msa0010870:CDS 30.0%
ATATATCTATACTTGGCTGA+TGG + chr1_1:16437861-16437880 None:intergenic 30.0%
GCGTCAAATATATCTATACT+TGG + chr1_1:16437868-16437887 None:intergenic 30.0%
GAAAATTCTTACCTCATCAA+AGG + chr1_1:16437890-16437909 None:intergenic 30.0%
ACTTAGTGCATGAATACAAT+AGG - chr1_1:16438124-16438143 Msa0010870:CDS 30.0%
TGAATACAATAGGCTATTCA+AGG - chr1_1:16438134-16438153 Msa0010870:CDS 30.0%
!! AGATCTTTTGAACTTTGAGA+AGG + chr1_1:16438462-16438481 None:intergenic 30.0%
CTCCTATTTACTATAATGAC+CGG - chr1_1:16438588-16438607 Msa0010870:CDS 30.0%
TACCGGTCATTATAGTAAAT+AGG + chr1_1:16438593-16438612 None:intergenic 30.0%
ATAATGACCGGTATATTGTT+TGG - chr1_1:16438600-16438619 Msa0010870:CDS 30.0%
! TATTGTTTGGCCTGATATTT+TGG - chr1_1:16438613-16438632 Msa0010870:CDS 30.0%
! ATTGTTTGGCCTGATATTTT+GGG - chr1_1:16438614-16438633 Msa0010870:CDS 30.0%
GCAAGATTTATTCAATGCAA+TGG - chr1_1:16438764-16438783 Msa0010870:intron 30.0%
CAACGATTGATCACAAAATT+CGG - chr1_1:16439073-16439092 Msa0010870:CDS 30.0%
AATATGAGTCATACACAACA+TGG - chr1_1:16439241-16439260 Msa0010870:intron 30.0%
TCGATAAACGAATCATTCAA+TGG - chr1_1:16439308-16439327 Msa0010870:CDS 30.0%
ATCATAGTATATGCCATGAT+GGG - chr1_1:16439445-16439464 Msa0010870:intron 30.0%
ATACTATGGTATGATGACAA+TGG - chr1_1:16439537-16439556 Msa0010870:intron 30.0%
TGTTATTAGGAAAGGTTGTT+AGG + chr1_1:16439665-16439684 None:intergenic 30.0%
! AAAGGGTTGAAGAATTTGTT+AGG - chr1_1:16439888-16439907 Msa0010870:CDS 30.0%
!! ATTGGTATTTTGAGGATCCA+TGG + chr1_1:16435715-16435734 None:intergenic 35.0%
CTATCATTGAAGTTGCCATT+TGG - chr1_1:16435737-16435756 Msa0010870:CDS 35.0%
AATATTTGGGTCAAAGCCAA+TGG + chr1_1:16435782-16435801 None:intergenic 35.0%
!! ATTGGCTTTGACCCAAATAT+TGG - chr1_1:16435781-16435800 Msa0010870:CDS 35.0%
! CAAGGTACCTTCCAATATTT+GGG + chr1_1:16435795-16435814 None:intergenic 35.0%
! TCAAGGTACCTTCCAATATT+TGG + chr1_1:16435796-16435815 None:intergenic 35.0%
!!! CAGGTTTTTTAAACAGTCGT+TGG - chr1_1:16435891-16435910 Msa0010870:intron 35.0%
AGTCCTATGCATTAATCAGA+TGG - chr1_1:16435915-16435934 Msa0010870:intron 35.0%
ATTAGGAAGGGATATTGTAG+TGG - chr1_1:16435966-16435985 Msa0010870:CDS 35.0%
! ACTACTTGCTCTTACTGTTT+TGG - chr1_1:16436011-16436030 Msa0010870:CDS 35.0%
! CTACTTGCTCTTACTGTTTT+GGG - chr1_1:16436012-16436031 Msa0010870:CDS 35.0%
!! GGAGGATTTGTTATTTCAAG+AGG - chr1_1:16436033-16436052 Msa0010870:CDS 35.0%
CATTAGAGGATGTGCATAAA+TGG - chr1_1:16436215-16436234 Msa0010870:intron 35.0%
GTGCATAAATGGTTTCTTTG+GGG - chr1_1:16436226-16436245 Msa0010870:intron 35.0%
!! AATGGTTTCTTTGGGGTTAT+TGG - chr1_1:16436233-16436252 Msa0010870:intron 35.0%
! GCATTTTGTCCATACATCAA+TGG + chr1_1:16436265-16436284 None:intergenic 35.0%
GTGAATGAATTTCTTGGACA+TGG - chr1_1:16436292-16436311 Msa0010870:intron 35.0%
ATGAATTTCTTGGACATGGT+TGG - chr1_1:16436296-16436315 Msa0010870:intron 35.0%
CCCAATGTTTCATTGGAATT+AGG + chr1_1:16436449-16436468 None:intergenic 35.0%
! GATTTTTCCCTCAAGCTTAT+TGG - chr1_1:16436492-16436511 Msa0010870:intron 35.0%
TCCAATACCAATAAGCTTGA+GGG + chr1_1:16436502-16436521 None:intergenic 35.0%
ATCCAATACCAATAAGCTTG+AGG + chr1_1:16436503-16436522 None:intergenic 35.0%
! CAAGCTTATTGGTATTGGAT+TGG - chr1_1:16436503-16436522 Msa0010870:intron 35.0%
! ATTGGAATTGGAGCTTTGAT+TGG - chr1_1:16436521-16436540 Msa0010870:intron 35.0%
CTTATCTCAAGAGAAATTGC+AGG - chr1_1:16436718-16436737 Msa0010870:CDS 35.0%
ATATAGGGAGTGAAAAGTCA+AGG - chr1_1:16437172-16437191 Msa0010870:intron 35.0%
!!! ACTCTAATGGATGTTTTAGC+TGG - chr1_1:16437295-16437314 Msa0010870:intron 35.0%
TTAGCTGGAAGAAAAACTAG+TGG - chr1_1:16437310-16437329 Msa0010870:intron 35.0%
!! TTTTTGATTCTTCGGATAGC+CGG + chr1_1:16437362-16437381 None:intergenic 35.0%
AAAAACATTCGCTCGCATAT+TGG - chr1_1:16437378-16437397 Msa0010870:CDS 35.0%
AAAACATTCGCTCGCATATT+GGG - chr1_1:16437379-16437398 Msa0010870:CDS 35.0%
TGAGATGCAGATGTTTATTG+AGG - chr1_1:16437597-16437616 Msa0010870:CDS 35.0%
!! TCATTAAGAGAAGCACTTGT+TGG - chr1_1:16437646-16437665 Msa0010870:intron 35.0%
TATATTTGACGCCTTTGATG+AGG - chr1_1:16437876-16437895 Msa0010870:CDS 35.0%
! CTCAAAGTACTCAATCAGAT+CGG + chr1_1:16438041-16438060 None:intergenic 35.0%
ATGGTTATAATCCTGCAACA+TGG - chr1_1:16438174-16438193 Msa0010870:CDS 35.0%
AGGAAAAGAGGCAAATCTTA+AGG - chr1_1:16438217-16438236 Msa0010870:CDS 35.0%
ACAAAAACTCAGAACTACAC+CGG - chr1_1:16438258-16438277 Msa0010870:CDS 35.0%
! GTTTTTACTAGGAGTCTAAC+CGG + chr1_1:16438280-16438299 None:intergenic 35.0%
CTAGTATCAAGATCTTTCTG+CGG + chr1_1:16438388-16438407 None:intergenic 35.0%
!! CACAATGTATAGCTTGTTTG+TGG - chr1_1:16438517-16438536 Msa0010870:intron 35.0%
TATCAGGCCAAACAATATAC+CGG + chr1_1:16438610-16438629 None:intergenic 35.0%
! TTGTTTGGCCTGATATTTTG+GGG - chr1_1:16438615-16438634 Msa0010870:CDS 35.0%
GTTCTCTCAATTGCTACTAT+TGG + chr1_1:16438846-16438865 None:intergenic 35.0%
TTCAATGGAAAGAGTTGTCA+AGG - chr1_1:16439323-16439342 Msa0010870:CDS 35.0%
TTGGTTCAAGCTGTTGTATA+TGG - chr1_1:16439421-16439440 Msa0010870:intron 35.0%
TGGTTCAAGCTGTTGTATAT+GGG - chr1_1:16439422-16439441 Msa0010870:intron 35.0%
GATCATAGTATATGCCATGA+TGG - chr1_1:16439444-16439463 Msa0010870:intron 35.0%
! AACATGTGGATTTGGAGTTA+TGG + chr1_1:16439563-16439582 None:intergenic 35.0%
GAATAATGAAGCCTGAGAAA+AGG + chr1_1:16439624-16439643 None:intergenic 35.0%
TAGGTGTAACTCACAGATAA+GGG + chr1_1:16439646-16439665 None:intergenic 35.0%
TTAGGTGTAACTCACAGATA+AGG + chr1_1:16439647-16439666 None:intergenic 35.0%
AATGGCAGAGAATACCAATA+TGG - chr1_1:16439768-16439787 Msa0010870:intron 35.0%
! GAATACCAATATGGTGGAAA+TGG - chr1_1:16439777-16439796 Msa0010870:intron 35.0%
TAGTACCATTTCCACCATAT+TGG + chr1_1:16439785-16439804 None:intergenic 35.0%
! TATGGTGGAAATGGTACTAT+TGG - chr1_1:16439786-16439805 Msa0010870:intron 35.0%
GTTCATGTTGTGTCCATATT+GGG + chr1_1:16439852-16439871 None:intergenic 35.0%
TGTTCATGTTGTGTCCATAT+TGG + chr1_1:16439853-16439872 None:intergenic 35.0%
AACATGAACACACTTGACAA+TGG - chr1_1:16439863-16439882 Msa0010870:CDS 35.0%
TTTGCACTTATCTTCACCTT+TGG - chr1_1:16439980-16439999 Msa0010870:CDS 35.0%
GTTGAATGCTTTGATACCAA+AGG + chr1_1:16439999-16440018 None:intergenic 35.0%
GTCACAGTAGCAATGTTCAA+TGG - chr1_1:16435595-16435614 Msa0010870:CDS 40.0%
GTAAGAGATGCATTCCCAAA+TGG + chr1_1:16435755-16435774 None:intergenic 40.0%
GCTTTGACCCAAATATTGGA+AGG - chr1_1:16435785-16435804 Msa0010870:CDS 40.0%
ACGCCATCTGATTAATGCAT+AGG + chr1_1:16435921-16435940 None:intergenic 40.0%
! GTCTGCGTTATTTCGGTTTA+TGG - chr1_1:16435939-16435958 Msa0010870:intron 40.0%
TTTCGGTTTATGGCAGCATT+AGG - chr1_1:16435949-16435968 Msa0010870:intron 40.0%
GTTTATGGCAGCATTAGGAA+GGG - chr1_1:16435954-16435973 Msa0010870:intron 40.0%
ATTGTAGTGGCCAACACATT+TGG - chr1_1:16435979-16435998 Msa0010870:CDS 40.0%
GGAACAACCTGTAACATTCA+AGG + chr1_1:16436428-16436447 None:intergenic 40.0%
CGATACTCCCAATGTTTCAT+TGG + chr1_1:16436456-16436475 None:intergenic 40.0%
! GTATCGATACTGAAATCTCG+CGG - chr1_1:16436470-16436489 Msa0010870:intron 40.0%
TCCCTCAAGCTTATTGGTAT+TGG - chr1_1:16436498-16436517 Msa0010870:intron 40.0%
TGTCTTTGCAGCATTCAGAA+AGG - chr1_1:16436685-16436704 Msa0010870:CDS 40.0%
TCTAAAGGACTCACTAGAAG+AGG + chr1_1:16436795-16436814 None:intergenic 40.0%
ACAAAGATGGATGAAGCAGT+TGG - chr1_1:16436895-16436914 Msa0010870:intron 40.0%
GAAAACAAAGCTAGCAGTAG+TGG - chr1_1:16436919-16436938 Msa0010870:intron 40.0%
! CAGTAGTGGAAGAAAAGGAA+TGG - chr1_1:16436933-16436952 Msa0010870:intron 40.0%
TCATCAAAACTGAGGGATAG+AGG + chr1_1:16436973-16436992 None:intergenic 40.0%
ATATTCTGTTGACATGCCAC+AGG - chr1_1:16436999-16437018 Msa0010870:CDS 40.0%
!! CTTAACTAGAAAGGTACCTG+TGG + chr1_1:16437018-16437037 None:intergenic 40.0%
! GATCGTCTCGAACTTTTGAA+GGG - chr1_1:16437205-16437224 Msa0010870:intron 40.0%
!!! GAACTTTTGAAGGGTGTTAG+TGG - chr1_1:16437214-16437233 Msa0010870:intron 40.0%
ATAAGAGCTGTTAGTACTCC+TGG + chr1_1:16437250-16437269 None:intergenic 40.0%
!! AGGAGTACTAACAGCTCTTA+TGG - chr1_1:16437249-16437268 Msa0010870:intron 40.0%
! GGAGTACTAACAGCTCTTAT+GGG - chr1_1:16437250-16437269 Msa0010870:intron 40.0%
ACAGCTCTTATGGGTATAAG+TGG - chr1_1:16437259-16437278 Msa0010870:intron 40.0%
TGCTGGAAAGACTACTCTAA+TGG - chr1_1:16437282-16437301 Msa0010870:intron 40.0%
!! TCAGCTGCTACTTCTGAAAT+TGG - chr1_1:16437973-16437992 Msa0010870:CDS 40.0%
!! CAGCTGCTACTTCTGAAATT+GGG - chr1_1:16437974-16437993 Msa0010870:CDS 40.0%
!! TGCTACTTCTGAAATTGGGA+GGG - chr1_1:16437978-16437997 Msa0010870:CDS 40.0%
CGATCTGATTGAGTACTTTG+AGG - chr1_1:16438039-16438058 Msa0010870:intron 40.0%
GGAGTTCCTAAGATCAAAGA+TGG - chr1_1:16438155-16438174 Msa0010870:CDS 40.0%
TAATCCTGCAACATGGATGT+TGG - chr1_1:16438181-16438200 Msa0010870:CDS 40.0%
ATTTCCAACATCCATGTTGC+AGG + chr1_1:16438188-16438207 None:intergenic 40.0%
ATGTTGGAAATTACGTCAGC+AGG - chr1_1:16438197-16438216 Msa0010870:CDS 40.0%
AATTACGTCAGCAGGAAAAG+AGG - chr1_1:16438205-16438224 Msa0010870:CDS 40.0%
TATGCTGCTGTTACCTTCAT+AGG - chr1_1:16438795-16438814 Msa0010870:intron 40.0%
ATGCTGCTGTTACCTTCATA+GGG - chr1_1:16438796-16438815 Msa0010870:intron 40.0%
ACCTTCATAGGGGTTGTAAA+TGG - chr1_1:16438807-16438826 Msa0010870:CDS 40.0%
ACCATTTACAACCCCTATGA+AGG + chr1_1:16438811-16438830 None:intergenic 40.0%
! AATACCTGTGCAAGAGCATA+TGG + chr1_1:16438912-16438931 None:intergenic 40.0%
GAGTAGACTCTCAAACTTAG+AGG + chr1_1:16439210-16439229 None:intergenic 40.0%
AACAGCTTGAACCAAGATGT+GGG + chr1_1:16439416-16439435 None:intergenic 40.0%
! GGACAGCATCAAAAGTTTTG+TGG - chr1_1:16439476-16439495 Msa0010870:intron 40.0%
GATAATATGCCAGCAACATG+TGG + chr1_1:16439577-16439596 None:intergenic 40.0%
CCATATTGCATAGAATGAGG+TGG + chr1_1:16439599-16439618 None:intergenic 40.0%
CCACCTCATTCTATGCAATA+TGG - chr1_1:16439596-16439615 Msa0010870:CDS 40.0%
GCACCATATTGCATAGAATG+AGG + chr1_1:16439602-16439621 None:intergenic 40.0%
ATTGGATTTGTCCTGTTGCA+TGG - chr1_1:16439804-16439823 Msa0010870:CDS 40.0%
ACACACTTGACAATGGTCAA+AGG - chr1_1:16439870-16439889 Msa0010870:CDS 40.0%
CACACTTGACAATGGTCAAA+GGG - chr1_1:16439871-16439890 Msa0010870:CDS 40.0%
!!! GGTTTTGAACATGACTTCCT+AGG - chr1_1:16439920-16439939 Msa0010870:CDS 40.0%
GGAAGAGAATAAGCCCATGA+AGG + chr1_1:16435691-16435710 None:intergenic 45.0%
!! GGTATTTTGAGGATCCATGG+TGG + chr1_1:16435712-16435731 None:intergenic 45.0%
TGCATCTCTTACTACGCCAT+TGG - chr1_1:16435763-16435782 Msa0010870:CDS 45.0%
AGATGGCGTCTGCGTTATTT+CGG - chr1_1:16435932-16435951 Msa0010870:intron 45.0%
GGTTTATGGCAGCATTAGGA+AGG - chr1_1:16435953-16435972 Msa0010870:intron 45.0%
!! CTTGCTCTTACTGTTTTGGG+AGG - chr1_1:16436015-16436034 Msa0010870:CDS 45.0%
TCTTGGACATGGTTGGAGAA+AGG - chr1_1:16436303-16436322 Msa0010870:intron 45.0%
GCATTCAGAAAGGATCAAGC+AGG - chr1_1:16436695-16436714 Msa0010870:CDS 45.0%
! GCTAGCAGTAGTGGAAGAAA+AGG - chr1_1:16436928-16436947 Msa0010870:intron 45.0%
CTGAGGGATAGAGGTTGAAA+AGG + chr1_1:16436964-16436983 None:intergenic 45.0%
GAAAAGTCAAGGAGTTTCCG+AGG - chr1_1:16437183-16437202 Msa0010870:intron 45.0%
CAAAAGTTCGAGACGATCCT+CGG + chr1_1:16437203-16437222 None:intergenic 45.0%
! GGATCGTCTCGAACTTTTGA+AGG - chr1_1:16437204-16437223 Msa0010870:intron 45.0%
! GTTAGTGGTGCTTTTAGACC+AGG - chr1_1:16437229-16437248 Msa0010870:intron 45.0%
CTTATGGGTATAAGTGGTGC+TGG - chr1_1:16437265-16437284 Msa0010870:intron 45.0%
!! GAAGGAAGCATCACAATAGC+CGG - chr1_1:16437340-16437359 Msa0010870:CDS 45.0%
AGTCGATCGCTCAACTAGAA+AGG - chr1_1:16437489-16437508 Msa0010870:intron 45.0%
TTCATGGATGAACCAACCTC+TGG - chr1_1:16437754-16437773 Msa0010870:CDS 45.0%
!! CTGCTACTTCTGAAATTGGG+AGG - chr1_1:16437977-16437996 Msa0010870:CDS 45.0%
!! GCTACTTCTGAAATTGGGAG+GGG - chr1_1:16437979-16437998 Msa0010870:CDS 45.0%
CAGATATACGCTGGTCCAAT+AGG - chr1_1:16438004-16438023 Msa0010870:intron 45.0%
ACTCAATCAGATCGGAACAG+TGG + chr1_1:16438033-16438052 None:intergenic 45.0%
GAGAAGGAACACTAAGCTCT+TGG + chr1_1:16438446-16438465 None:intergenic 45.0%
TGCTGCTGTTACCTTCATAG+GGG - chr1_1:16438797-16438816 Msa0010870:intron 45.0%
! TGCTACTATTGGTTGTACCG+AGG + chr1_1:16438835-16438854 None:intergenic 45.0%
TTCTACAGAGAAAGAGCTGC+AGG - chr1_1:16438870-16438889 Msa0010870:CDS 45.0%
TATGCCATATGCTCTTGCAC+AGG - chr1_1:16438905-16438924 Msa0010870:intron 45.0%
! GTCTGAGACGTAGACACAAT+AGG + chr1_1:16439099-16439118 None:intergenic 45.0%
GACTCTCAAACTTAGAGGAC+CGG + chr1_1:16439205-16439224 None:intergenic 45.0%
CATAGAACTTCCCCACATCT+TGG - chr1_1:16439402-16439421 Msa0010870:intron 45.0%
ACAGCTTGAACCAAGATGTG+GGG + chr1_1:16439415-16439434 None:intergenic 45.0%
CAACAGCTTGAACCAAGATG+TGG + chr1_1:16439417-16439436 None:intergenic 45.0%
! ATGCCATGATGGGATTTGAG+TGG - chr1_1:16439455-16439474 Msa0010870:intron 45.0%
TGTCCACTCAAATCCCATCA+TGG + chr1_1:16439461-16439480 None:intergenic 45.0%
ACTCCAAATCCACATGTTGC+TGG - chr1_1:16439565-16439584 Msa0010870:CDS 45.0%
ATGCCAGCAACATGTGGATT+TGG + chr1_1:16439571-16439590 None:intergenic 45.0%
! GCAATATGGTGCCTTTTCTC+AGG - chr1_1:16439610-16439629 Msa0010870:CDS 45.0%
GGCAGAGAATACCAATATGG+TGG - chr1_1:16439771-16439790 Msa0010870:intron 45.0%
TGCATGGACCTTGAATGGAT+TGG - chr1_1:16439820-16439839 Msa0010870:CDS 45.0%
GGAAGTCACCAATCCATTCA+AGG + chr1_1:16439831-16439850 None:intergenic 45.0%
! GGATTGGTGACTTCCCAATA+TGG - chr1_1:16439836-16439855 Msa0010870:CDS 45.0%
TGAACATGACTTCCTAGGAG+TGG - chr1_1:16439925-16439944 Msa0010870:CDS 45.0%
CAACAATTGCAACCACTCCT+AGG + chr1_1:16439940-16439959 None:intergenic 45.0%
AGGAGTGGTTGCAATTGTTG+TGG - chr1_1:16439940-16439959 Msa0010870:CDS 45.0%
GGGCTTATTCTCTTCCACCA+TGG - chr1_1:16435695-16435714 Msa0010870:CDS 50.0%
TGGTCGTCGCCATTGATGTA+TGG - chr1_1:16436253-16436272 Msa0010870:intron 50.0%
! CTAGTTGAGCGATCGACTTC+AGG + chr1_1:16437487-16437506 None:intergenic 50.0%
! GAAGCACTTGTTGGATTGCC+AGG - chr1_1:16437655-16437674 Msa0010870:intron 50.0%
CTAGCATCAAGTCCAGAGGT+TGG + chr1_1:16437769-16437788 None:intergenic 50.0%
TGCTCTAGCATCAAGTCCAG+AGG + chr1_1:16437773-16437792 None:intergenic 50.0%
GAGAACAGTAAGGAACACCG+TGG - chr1_1:16437807-16437826 Msa0010870:CDS 50.0%
AGGGGTTGTAAATGGTGCCT+CGG - chr1_1:16438815-16438834 Msa0010870:CDS 50.0%
CCATTCAAGGTCCATGCAAC+AGG + chr1_1:16439818-16439837 None:intergenic 50.0%
CCTGTTGCATGGACCTTGAA+TGG - chr1_1:16439815-16439834 Msa0010870:CDS 50.0%
! GTTGAGCGATCGACTTCAGG+CGG + chr1_1:16437484-16437503 None:intergenic 55.0%
GTTGAAAGTCCACTCTCGCC+TGG + chr1_1:16437676-16437695 None:intergenic 55.0%
GTAAGGAACACCGTGGACAC+AGG - chr1_1:16437814-16437833 Msa0010870:CDS 55.0%
CACAGTACGTCCTGTGTCCA+CGG + chr1_1:16437827-16437846 None:intergenic 55.0%
TCGGAACAGTGGTCGCCTAT+TGG + chr1_1:16438022-16438041 None:intergenic 55.0%
!!! GGCCTGATATTTTGGGGCGT+TGG - chr1_1:16438621-16438640 Msa0010870:CDS 55.0%
CGCCAACGCCCCAAAATATC+AGG + chr1_1:16438626-16438645 None:intergenic 55.0%
GTTGGATTGCCAGGCGAGAG+TGG - chr1_1:16437664-16437683 Msa0010870:intron 60.0%
CGTGGACACAGGACGTACTG+TGG - chr1_1:16437825-16437844 Msa0010870:CDS 60.0%
GGAGGGGAGCAGATATACGC+TGG - chr1_1:16437995-16438014 Msa0010870:intron 60.0%
!! TTTGGGGCGTTGGCGCGAAA+AGG - chr1_1:16438631-16438650 Msa0010870:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 16435574 16440033 16435574 ID=Msa0010870;Name=Msa0010870
chr1_1 mRNA 16435574 16440033 16435574 ID=Msa0010870-mRNA-1;Parent=Msa0010870;Name=Msa0010870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|14|0|880
chr1_1 exon 16439801 16440033 16439801 ID=Msa0010870-mRNA-1:exon:6025;Parent=Msa0010870-mRNA-1
chr1_1 exon 16439553 16439713 16439553 ID=Msa0010870-mRNA-1:exon:6024;Parent=Msa0010870-mRNA-1
chr1_1 exon 16439283 16439386 16439283 ID=Msa0010870-mRNA-1:exon:6023;Parent=Msa0010870-mRNA-1
chr1_1 exon 16439011 16439167 16439011 ID=Msa0010870-mRNA-1:exon:6022;Parent=Msa0010870-mRNA-1
chr1_1 exon 16438807 16438911 16438807 ID=Msa0010870-mRNA-1:exon:6021;Parent=Msa0010870-mRNA-1
chr1_1 exon 16438587 16438714 16438587 ID=Msa0010870-mRNA-1:exon:6020;Parent=Msa0010870-mRNA-1
chr1_1 exon 16438097 16438429 16438097 ID=Msa0010870-mRNA-1:exon:6019;Parent=Msa0010870-mRNA-1
chr1_1 exon 16437710 16438000 16437710 ID=Msa0010870-mRNA-1:exon:6018;Parent=Msa0010870-mRNA-1
chr1_1 exon 16437547 16437630 16437547 ID=Msa0010870-mRNA-1:exon:6017;Parent=Msa0010870-mRNA-1
chr1_1 exon 16437328 16437461 16437328 ID=Msa0010870-mRNA-1:exon:6016;Parent=Msa0010870-mRNA-1
chr1_1 exon 16436955 16437182 16436955 ID=Msa0010870-mRNA-1:exon:6015;Parent=Msa0010870-mRNA-1
chr1_1 exon 16436681 16436852 16436681 ID=Msa0010870-mRNA-1:exon:6014;Parent=Msa0010870-mRNA-1
chr1_1 exon 16435956 16436210 16435956 ID=Msa0010870-mRNA-1:exon:6013;Parent=Msa0010870-mRNA-1
chr1_1 exon 16435574 16435831 16435574 ID=Msa0010870-mRNA-1:exon:6012;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16439801 16440033 16439801 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16439553 16439713 16439553 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16439283 16439386 16439283 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16439011 16439167 16439011 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16438807 16438911 16438807 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16438587 16438714 16438587 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16438097 16438429 16438097 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16437710 16438000 16437710 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16437547 16437630 16437547 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16437328 16437461 16437328 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16436955 16437182 16436955 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16436681 16436852 16436681 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16435956 16436210 16435956 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
chr1_1 CDS 16435574 16435831 16435574 ID=Msa0010870-mRNA-1:cds;Parent=Msa0010870-mRNA-1
Gene Sequence

>Msa0010870

ATGGGAGCACTATTTTTCACAGTCACAGTAGCAATGTTCAATGGAATATCAGAGCTAAATATGACTATCATGAAACTTCCTATCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAATAACTATCATTGAAGTTGCCATTTGGGAATGCATCTCTTACTACGCCATTGGCTTTGACCCAAATATTGGAAGGTTTTTTAAACAGTCGTTGGTAGTCCTATGCATTAATCAGATGGCGTCTGCGTTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTGGCCAACACATTTGGAACATTTTCACTACTTGCTCTTACTGTTTTGGGAGGATTTGTTATTTCAAGAGAGGATGTGCATAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAAAATGCTATAGCTGTGAATGAATTTCTTGGACATGGTTGGAGAAAGGTTGTTCCTAATTCCAATGAAACATTGGGAGTATCGATACTGAAATCTCGCGGATTTTTCCCTCAAGCTTATTGGTATTGGATTGGAATTGGAGCTTTGATTGGTTATGTTTTTCTATTTAATTTTCTCTTTGCATTGGCTTTGCACTATCTCAGTCCATTCAGAAAGGATCAAGCAGGCTTATCTCAAGAGAAATTGCAGGAGAGAAATGATTCAACAGCTGAAGAGTTCATTCAATCACAGACACAAAAAACCTCTTCTAATACAAAGATGGATGAAGCAGTTGGCGAAAACAAAGCTAGCAGTAGTGGAAGAAAAGGAATGGTTCTTCCTTTTCAACCTCTATCCCTCAGTTTTGATGATATCAAATATTCTGTTGACATGCCACAGGGAGTGAAAAGTCAAGGAGTTTCCGAGGATCGTCTCGAACTTTTGAAGGGTGTTAGTGGTGCTTTTAGACCAGGAGTACTAACAGCTCTTATGGGTATAAGTGGTGCTGGAAAGACTACTCTAATGGATGTTTTAGCTGGAAGAAAAACTAGTGGATATATTGAAGGAAGCATCACAATAGCCGGCTATCCGAAGAATCAAAAAACATTCGCTCGCATATTGGGATATTGCGAACAATTTGACATACATTCACCTAATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGTTTACCGCCTGAAGTCGATCGCTCAACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAGAGTGGACTTTCAACAGAACAACGCAAGAGACTTACAATTGCAGTTGAACTTGTAGCGAATCCATCGATAATATTCATGGATGAACCAACCTCTGGACTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTAAGGAACACCGTGGACACAGGACGTACTGTGGTGTGCACGATCCATCAGCCAAGTATAGATATATTTGACGCCTTTGATGAGCTGCTACTTCTGAAATTGGGAGGGGAGCAGATATACGCTGGTCCAATAGGCGACCACTGTTCCGATCTGATTGAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAATTACGTCAGCAGGAAAAGAGGCAAATCTTAAGGTCAATTTCAGTGATGTGTACAAAAACTCAGAACTACACCGGAGAAATAAACAATTGATCCAAGAGCTTAGTGTTCCTTCTCAAAGTTCAAAAGATCTATACTTTGATGCTCAATATTCACAGACATTTGTAGCACAATGTATAGCTTGTTTGTGGAAACAACATTTATCATATTGGAGGAATACATCATATACAGCTGTTAGACTCCTATTTACTATAATGACCGGTATATTGTTTGGCCTGATATTTTGGGGCGTTGGCGCGAAAAGTAAAAAGGAGCAAGATTTATTCAATGCAATGGGGTCAATGTATGCTGCTGTTACCTTCATAGGGGTTGTAAATGGTGCCTCGGTACAACCAATAGTAGCAATTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCAGGAATGTATTCAGCTATGCCATATGCTCTTGCACAGGTTATCATAGAACTTCCCCACATCTTGGTTCAAGCTGTTGTATATGGGATCATAGTATATGCCATGATGGGATTTGAGTGGACAGCATCAAAAGTTTTGTGGAATCTCTTCTTCACTTATTTTAGTTTCTTATACTATACATACTATGGTATGATGACAATGGCCATAACTCCAAATCCACATGTTGCTGGCATATTATCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCAATATGGTGGAAATGGTACTATTGGATTTGTCCTGTTGCATGGACCTTGAATGGATTGGTGACTTCCCAATATGGACACAACATGAACACACTTGACAATGGTCAAAGGGTTGAAGAATTTGTTAGGAATTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGCTAGTTTCTCAGTGTTGTTTGCACTTATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA
Protein sequence

>Msa0010870

MGALFFTVTVAMFNGISELNMTIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFKQSLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLALTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVVPNSNETLGVSILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFALALHYLSPFRKDQAGLSQEKLQERNDSTAEEFIQSQTQKTSSNTKMDEAVGENKASSSGRKGMVLPFQPLSLSFDDIKYSVDMPQGVKSQGVSEDRLELLKGVSGAFRPGVLTALMGISGAGKTTLMDVLAGRKTSGYIEGSITIAGYPKNQKTFARILGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDRSTRKMFIEEVMELVELNSLREALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPIGDHCSDLIEYFEAIQGVPKIKDGYNPATWMLEITSAGKEANLKVNFSDVYKNSELHRRNKQLIQELSVPSQSSKDLYFDAQYSQTFVAQCIACLWKQHLSYWRNTSYTAVRLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGHNMNTLDNGQRVEEFVRNYFGFEHDFLGVVAIVVASFSVLFALIFTFGIKAFNFQKR*