AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0126080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126080 MtrunA17_Chr1g0188921 96.596 470 12 2 1 469 1 467 0.0 917
Msa0126080 MtrunA17_Chr4g0058781 37.883 359 199 6 122 466 22 370 8.64e-74 237
Msa0126080 MtrunA17_Chr4g0057301 36.667 180 91 5 290 467 421 579 3.26e-14 75.1
Msa0126080 MtrunA17_Chr8g0350381 30.625 160 96 3 309 467 389 534 3.06e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126080 AT4G10790.1 66.872 486 135 4 1 467 1 479 0.0 616
Msa0126080 AT4G23040.1 34.225 187 104 4 283 467 355 524 2.81e-14 75.5
Msa0126080 AT4G11740.1 32.222 180 110 3 290 467 394 563 6.61e-13 71.2

Find 142 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCCTCGCCGCTCATAAT+TGG 0.132781 1_3:+54991461 Msa0126080:CDS
TATGTATTCATAAGATTATT+TGG 0.208264 1_3:-54997372 None:intergenic
AATTGAATTGAATTGGAATT+TGG 0.209556 1_3:-54991280 None:intergenic
CATATATTATACTCTGTTTC+CGG 0.235845 1_3:+54997586 Msa0126080:three_prime_UTR
ACTCACAAAATTCGGCTTAA+AGG 0.251262 1_3:-54991890 None:intergenic
ATCTCAGGAGCAATCGGTTT+TGG 0.260770 1_3:+54991694 Msa0126080:CDS
CTACAAAACTCCGGTGTATC+AGG 0.293692 1_3:-54991991 None:intergenic
GTGATTGAATTGAATTGAAT+TGG 0.294130 1_3:-54991287 None:intergenic
GAGGGAGTGGTGGTTCTGAT+TGG 0.294892 1_3:-54991600 None:intergenic
TGTTCCAGATCTTTAGAGTA+TGG 0.296489 1_3:+54997618 Msa0126080:three_prime_UTR
AGCCTTGCTGCAACAAGAAC+TGG 0.308918 1_3:-54996451 None:intergenic
AACTTCCCTCGGGTTGTTTA+CGG 0.315174 1_3:+54997258 Msa0126080:CDS
TCTGCTGCTGCTTCCTCTGC+TGG 0.326865 1_3:+54991784 Msa0126080:CDS
CCGGGTGGTGGTGGAGGGAG+TGG 0.332080 1_3:-54991613 None:intergenic
CTTGGTGAAGAACCTGAAAA+AGG 0.335458 1_3:+54996913 Msa0126080:CDS
GGGTAATTTGATAAGCTTCC+AGG 0.342053 1_3:-54991641 None:intergenic
AGATCTTTAGAGTATGGTTT+TGG 0.342427 1_3:+54997624 Msa0126080:three_prime_UTR
CTTTCTTTGCGCACACCATT+GGG 0.343968 1_3:-54997144 None:intergenic
GCTAATCCGGGTGGTGGTGG+AGG 0.354614 1_3:-54991619 None:intergenic
CCTTTCTTTGCGCACACCAT+TGG 0.365652 1_3:-54997145 None:intergenic
AGGGAGTGGTGGTTCTGATT+GGG 0.377819 1_3:-54991599 None:intergenic
GTATGACTATGTTGATTCAT+TGG 0.383014 1_3:+54997200 Msa0126080:CDS
GCAGCAGCAGACGATGAGTT+TGG 0.387911 1_3:-54991772 None:intergenic
TACTTTACCTGTGTAACATT+AGG 0.391398 1_3:-54996937 None:intergenic
TTGAATTGTGAATTGTGAAT+TGG 0.393391 1_3:-54991215 None:intergenic
AGGAGTGTCGGTGGCGGTGG+TGG 0.395282 1_3:-54991515 None:intergenic
TATGACTATGTTGATTCATT+GGG 0.400057 1_3:+54997201 Msa0126080:CDS
AGTGTCGGTGGCGGTGGTGG+TGG 0.400129 1_3:-54991512 None:intergenic
AAACCCTCACTCACAAAATT+CGG 0.407434 1_3:-54991898 None:intergenic
GAGAATCGCGCTTCTTCAAC+AGG 0.409834 1_3:+54992170 Msa0126080:CDS
GCCAGTCTGTTTGTGGAGCT+CGG 0.410845 1_3:+54997330 Msa0126080:CDS
ACGAACTAATGCACGCTTAA+GGG 0.410986 1_3:+54996489 Msa0126080:CDS
AAGAGCAAGATGCTGCATAT+AGG 0.414768 1_3:+54996512 Msa0126080:CDS
GATAAGCTTCCAGGCTAATC+CGG 0.419470 1_3:-54991632 None:intergenic
TAAAGATGTGACCTGCAGAT+AGG 0.419579 1_3:+54997393 Msa0126080:three_prime_UTR
TCCTCAGGCCAGTCTGTTTG+TGG 0.421845 1_3:+54997323 Msa0126080:CDS
TCTTCTGAATTCTGAATTGT+CGG 0.422945 1_3:+54991332 Msa0126080:five_prime_UTR
GATCCTCGCCGCTCATAATT+GGG 0.423758 1_3:+54991462 Msa0126080:CDS
GGTGGTGGTGGAGGGAGTGG+TGG 0.427710 1_3:-54991610 None:intergenic
AGAGCAAGATGCTGCATATA+GGG 0.429045 1_3:+54996513 Msa0126080:CDS
GTTCTGATTGGGATGACGAT+TGG 0.429670 1_3:-54991588 None:intergenic
GACGAACTAATGCACGCTTA+AGG 0.429809 1_3:+54996488 Msa0126080:CDS
TTCTGATTGGGATGACGATT+GGG 0.430586 1_3:-54991587 None:intergenic
TCCGTTATTTCCGGTAGTCT+AGG 0.432887 1_3:+54991667 Msa0126080:CDS
CAGGCTAATCCGGGTGGTGG+TGG 0.434703 1_3:-54991622 None:intergenic
CTTGTAAACCGGTGATTGCT+TGG 0.437082 1_3:-54991420 None:intergenic
TCGCTTGGCTTCGTCGGCCT+CGG 0.437191 1_3:+54991748 Msa0126080:CDS
TTACCCGTCTCCGTTATTTC+CGG 0.441163 1_3:+54991658 Msa0126080:CDS
TAAGATGAGTAATAGTTTGA+AGG 0.444349 1_3:+54992101 Msa0126080:CDS
CCCTAGACTACCGGAAATAA+CGG 0.446307 1_3:-54991668 None:intergenic
TTCTGAATTGTCGGTGCTAA+GGG 0.446975 1_3:+54991341 Msa0126080:five_prime_UTR
AAAACCATACTCTAAAGATC+TGG 0.447693 1_3:-54997622 None:intergenic
AAAGATGTGACCTGCAGATA+GGG 0.448851 1_3:+54997394 Msa0126080:three_prime_UTR
GCCTAGTCTCTAACTTCCCT+CGG 0.451100 1_3:+54997247 Msa0126080:CDS
TGGAATTTGGAGGAAGAAGA+AGG 0.451435 1_3:-54991267 None:intergenic
TCCGGTGTATCAGGATGATC+AGG 0.452932 1_3:-54991982 None:intergenic
TTCCTCTGCTGGCACGCCGT+TGG 0.453850 1_3:+54991795 Msa0126080:CDS
TTGTAGAAGGACGCTTTGTT+CGG 0.456059 1_3:+54992008 Msa0126080:CDS
TCATATTCGCTTGGCTTCGT+CGG 0.456355 1_3:+54991742 Msa0126080:CDS
GGCTCGTGAAAGAGCAGCGC+AGG 0.457421 1_3:+54996834 Msa0126080:CDS
CCGTTATTTCCGGTAGTCTA+GGG 0.466311 1_3:+54991668 Msa0126080:CDS
TGAATTGAATTGGAATTTGG+AGG 0.472761 1_3:-54991277 None:intergenic
AGGATCTCGTTGCAGAGGTC+GGG 0.474470 1_3:-54991445 None:intergenic
GTGAGGAGTGTCGGTGGCGG+TGG 0.475194 1_3:-54991518 None:intergenic
GCCTTGCTGCAACAAGAACT+GGG 0.476016 1_3:-54996450 None:intergenic
GGTGTTCTTTCATATTCGCT+TGG 0.477722 1_3:+54991733 Msa0126080:CDS
CCCCAGTTCTTGTTGCAGCA+AGG 0.480156 1_3:+54996449 Msa0126080:CDS
GGGTTAATCTCAGGAGCAAT+CGG 0.482162 1_3:+54991688 Msa0126080:CDS
CACCACCACCCGGATTAGCC+TGG 0.483012 1_3:+54991623 Msa0126080:CDS
CTAATCCGGGTGGTGGTGGA+GGG 0.489939 1_3:-54991618 None:intergenic
AAAATTAGCACTCTCACTAA+AGG 0.498558 1_3:+54997287 Msa0126080:CDS
CCAATGGTGTGCGCAAAGAA+AGG 0.500885 1_3:+54997145 Msa0126080:CDS
TGGATGCGTTACAGCGGTCG+AGG 0.501906 1_3:+54991923 Msa0126080:CDS
CAAAATTGTAGGTGTTGGTA+CGG 0.502967 1_3:+54997118 Msa0126080:intron
ATTCTGAATTGTCGGTGCTA+AGG 0.504067 1_3:+54991340 Msa0126080:five_prime_UTR
GAAGAGAAAGCTCAATCTCT+TGG 0.505332 1_3:+54996895 Msa0126080:CDS
GCACTCTCACTAAAGGAAGC+TGG 0.514040 1_3:+54997294 Msa0126080:CDS
ATAAGCTTCCAGGCTAATCC+GGG 0.514955 1_3:-54991631 None:intergenic
GGGAATATTCGTGCTAGTGA+AGG 0.517235 1_3:+54992075 Msa0126080:CDS
GCGTGAAGTGAATAAATTCG+TGG 0.521629 1_3:-54991240 None:intergenic
AGTGTCACTAACATCTCCTC+GGG 0.521835 1_3:-54996403 None:intergenic
ATCAAGCATATAGCTTTACA+TGG 0.523072 1_3:+54997544 Msa0126080:three_prime_UTR
TCCTGATCATCCTGATACAC+CGG 0.529879 1_3:+54991981 Msa0126080:CDS
GGAATTTGGAGGAAGAAGAA+GGG 0.532027 1_3:-54991266 None:intergenic
AAGAGGAAGAACGTCTTGCA+AGG 0.535723 1_3:+54996770 Msa0126080:CDS
GAGGATCTCGTTGCAGAGGT+CGG 0.536796 1_3:-54991446 None:intergenic
AAGATGAGATGGCGAGTTCG+AGG 0.537458 1_3:-54991486 None:intergenic
GGAAGCTGGATTGCATCCTC+AGG 0.540277 1_3:+54997308 Msa0126080:CDS
AAGTGTCACTAACATCTCCT+CGG 0.548419 1_3:-54996404 None:intergenic
TTCCAGGCTAATCCGGGTGG+TGG 0.552711 1_3:-54991625 None:intergenic
GGAATATTCGTGCTAGTGAA+GGG 0.556663 1_3:+54992076 Msa0126080:CDS
AACCAACGGCGTGCCAGCAG+AGG 0.558001 1_3:-54991797 None:intergenic
TAGAAGGACGCTTTGTTCGG+AGG 0.560780 1_3:+54992011 Msa0126080:CDS
GCTTACTTCCAAGCAATCAC+CGG 0.561387 1_3:+54991412 Msa0126080:CDS
GAGGTCGGGATCTTGTAAAC+CGG 0.561487 1_3:-54991431 None:intergenic
GCCATGACAAGAGCACAAAA+CGG 0.562125 1_3:-54992135 None:intergenic
ATCGCCGCCGTGAGGAGTGT+CGG 0.565734 1_3:-54991527 None:intergenic
TTTGAGAGGGATTATGGCGG+TGG 0.568300 1_3:+54991865 Msa0126080:CDS
CCTAGTCTCTAACTTCCCTC+GGG 0.569165 1_3:+54997248 Msa0126080:CDS
CCACTCCCTCCACCACCACC+CGG 0.570650 1_3:+54991613 Msa0126080:CDS
ACCGAGCTCCACAAACAGAC+TGG 0.577057 1_3:-54997331 None:intergenic
GCCGTGAGGAGTGTCGGTGG+CGG 0.582211 1_3:-54991521 None:intergenic
TGAGATTAACCCTAGACTAC+CGG 0.583490 1_3:-54991677 None:intergenic
GGTAGTCTAGGGTTAATCTC+AGG 0.589893 1_3:+54991679 Msa0126080:CDS
CTACCGGAAATAACGGAGAC+GGG 0.589992 1_3:-54991661 None:intergenic
TGAAGCTGAGAGAAAGCTCA+AGG 0.590929 1_3:+54996801 Msa0126080:CDS
AAGATGTGACCTGCAGATAG+GGG 0.593089 1_3:+54997395 Msa0126080:three_prime_UTR
GAGAAAGCTCAAGGAAGAAG+AGG 0.595361 1_3:+54996810 Msa0126080:CDS
TTTGTGGAGCTCGGTTCATG+AGG 0.596829 1_3:+54997339 Msa0126080:CDS
GTGTTGGTACGGTTTCCCAA+TGG 0.600493 1_3:+54997129 Msa0126080:CDS
CCCGAGGGAAGTTAGAGACT+AGG 0.610507 1_3:-54997248 None:intergenic
AGAGGAAGAACGTCTTGCAA+GGG 0.610541 1_3:+54996771 Msa0126080:CDS
ACCGCCACCGACACTCCTCA+CGG 0.610598 1_3:+54991520 Msa0126080:CDS
AGATGTGACCTGCAGATAGG+GGG 0.615889 1_3:+54997396 Msa0126080:three_prime_UTR
AGCGTCCTTCTACAAAACTC+CGG 0.619964 1_3:-54992000 None:intergenic
GGAACGGCAGAGAAGAGAAG+AGG 0.621468 1_3:+54996753 Msa0126080:CDS
TTGGAATCATCGCCGCCGTG+AGG 0.624238 1_3:-54991535 None:intergenic
CGGCGAGGATCTCGTTGCAG+AGG 0.626530 1_3:-54991450 None:intergenic
AAAGCTCAAGGAAGAAGAGG+AGG 0.627771 1_3:+54996813 Msa0126080:CDS
TATATGTTCAGGCTAGGGAA+CGG 0.630989 1_3:+54996737 Msa0126080:intron
GCCGCCGTGAGGAGTGTCGG+TGG 0.632822 1_3:-54991524 None:intergenic
TCTTGTCCGTAAACAACCCG+AGG 0.633904 1_3:-54997264 None:intergenic
TTTGGATTATGGGCTGCTGG+TGG 0.636573 1_3:+54991712 Msa0126080:CDS
AAAAGGACCTAATGTTACAC+AGG 0.641329 1_3:+54996930 Msa0126080:CDS
ACTACCGGAAATAACGGAGA+CGG 0.647662 1_3:-54991662 None:intergenic
TTATAGATAATAGATTGCTG+TGG 0.652644 1_3:+54997483 Msa0126080:three_prime_UTR
GATGTGACCTGCAGATAGGG+GGG 0.655057 1_3:+54997397 Msa0126080:three_prime_UTR
ATGGTGTGCGCAAAGAAAGG+AGG 0.657288 1_3:+54997148 Msa0126080:CDS
GGTGGTGGTGAAAGATGAGA+TGG 0.662580 1_3:-54991497 None:intergenic
TCCACAAACAGACTGGCCTG+AGG 0.673911 1_3:-54997324 None:intergenic
GTAATAGTTTGAAGGCGTCG+AGG 0.675844 1_3:+54992109 Msa0126080:CDS
TTCGAGGTCCCAATTATGAG+CGG 0.679111 1_3:-54991470 None:intergenic
AGCTTCCAGGCTAATCCGGG+TGG 0.686477 1_3:-54991628 None:intergenic
CTTGTCCGTAAACAACCCGA+GGG 0.687473 1_3:-54997263 None:intergenic
GTGTCACTAACATCTCCTCG+GGG 0.689574 1_3:-54996402 None:intergenic
GTTTCATGGATGCGTTACAG+CGG 0.696327 1_3:+54991917 Msa0126080:CDS
CCTTGCTGCAACAAGAACTG+GGG 0.706366 1_3:-54996449 None:intergenic
GCAGCAGATACAGAAACCAA+CGG 0.708973 1_3:-54991811 None:intergenic
GGTCCCAATTATGAGCGGCG+AGG 0.724899 1_3:-54991465 None:intergenic
CAGACGATGAGTTTGGACCG+AGG 0.750492 1_3:-54991765 None:intergenic
TGTCACTAACATCTCCTCGG+GGG 0.758406 1_3:-54996401 None:intergenic
GCCACCGACACTCCTCACGG+CGG 0.780197 1_3:+54991523 Msa0126080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAGATATATATACAT+GGG - chr1_3:54993698-54993717 None:intergenic 10.0%
!!! TTTTAAAAGATATATATACA+TGG - chr1_3:54993699-54993718 None:intergenic 10.0%
!!! AAAATTTTGTTAATAAGTTT+AGG + chr1_3:54993715-54993734 Msa0126080:intron 10.0%
!! ATAATAATAAATATATCTAG+CGG - chr1_3:54994542-54994561 None:intergenic 10.0%
!!! ATTTTTTTTTTTTTTCTTTC+AGG + chr1_3:54995196-54995215 Msa0126080:intron 10.0%
!!! TTTTTTTTTTTTTTCTTTCA+GGG + chr1_3:54995197-54995216 Msa0126080:intron 10.0%
!!! AAAATATTTTAAAGTGATAA+AGG - chr1_3:54995930-54995949 None:intergenic 10.0%
!!! TTATTTTATGTGTATGTATT+TGG + chr1_3:54992297-54992316 Msa0126080:intron 15.0%
!! ATGGTAATAATTTAAGAAAA+TGG - chr1_3:54992555-54992574 None:intergenic 15.0%
!! AGATAATTAAGATTCAAATT+TGG + chr1_3:54992755-54992774 Msa0126080:intron 15.0%
!! TTTCTTAAAAACTAAAGATA+TGG - chr1_3:54993746-54993765 None:intergenic 15.0%
!! ACATTAACATAAAAATTATG+AGG + chr1_3:54994028-54994047 Msa0126080:intron 15.0%
!! AAAAAAAAAATAGAATGACA+CGG - chr1_3:54995187-54995206 None:intergenic 15.0%
!!! ATTTTATTAGTTTTGTTGTT+TGG + chr1_3:54995534-54995553 Msa0126080:intron 15.0%
!! AAACTACAATACTTAATAAT+TGG - chr1_3:54996150-54996169 None:intergenic 15.0%
!! AAACTACAATACTTAATAAT+TGG - chr1_3:54996150-54996169 None:intergenic 15.0%
!! AAAAAATGAGAAACTAAAAA+GGG - chr1_3:54997031-54997050 None:intergenic 15.0%
!!! TTTTTAGTTTCTCATTTTTT+CGG + chr1_3:54997031-54997050 Msa0126080:intron 15.0%
!! TATGTATTCATAAGATTATT+TGG - chr1_3:54997375-54997394 None:intergenic 15.0%
!! AATTGAATTGAATTGGAATT+TGG - chr1_3:54991283-54991302 None:intergenic 20.0%
!!! TTTTTTGATGTTGGATTTTT+TGG + chr1_3:54992208-54992227 Msa0126080:intron 20.0%
!!! AACTAAAACTTGTTATAGTT+AGG - chr1_3:54992433-54992452 None:intergenic 20.0%
!! GTAATAATTTAAGAAAATGG+AGG - chr1_3:54992552-54992571 None:intergenic 20.0%
!!! GTCTTATTAACTAATTTTGT+TGG + chr1_3:54993856-54993875 Msa0126080:intron 20.0%
!! ATGGTTTATTACACATAATA+TGG + chr1_3:54994377-54994396 Msa0126080:intron 20.0%
!! TATTACACATAATATGGTTA+CGG + chr1_3:54994383-54994402 Msa0126080:intron 20.0%
!! AGCATTATAATATTCAAACT+TGG - chr1_3:54994692-54994711 None:intergenic 20.0%
!! AATGAAAAGTCAAAATAGAA+AGG + chr1_3:54994884-54994903 Msa0126080:intron 20.0%
!! AAAAAAGATAACAACAATGT+TGG - chr1_3:54995892-54995911 None:intergenic 20.0%
!!! TTTTGTATATCATTTTTCTG+TGG + chr1_3:54996606-54996625 Msa0126080:intron 20.0%
!! GAAAAAATGAGAAACTAAAA+AGG - chr1_3:54997032-54997051 None:intergenic 20.0%
!! TGTTTCATTATGTATTAACT+TGG + chr1_3:54997063-54997082 Msa0126080:intron 20.0%
! TTGAATTGTGAATTGTGAAT+TGG - chr1_3:54991218-54991237 None:intergenic 25.0%
! GTGATTGAATTGAATTGAAT+TGG - chr1_3:54991290-54991309 None:intergenic 25.0%
!! ATTGTTGTTGTTGTTGTTAT+TGG - chr1_3:54991557-54991576 None:intergenic 25.0%
! TAAGATGAGTAATAGTTTGA+AGG + chr1_3:54992101-54992120 Msa0126080:CDS 25.0%
!! TCTTTTGCATTATATGTTTG+CGG + chr1_3:54992636-54992655 Msa0126080:intron 25.0%
!! CTTTACACGTATTGATAAAT+CGG - chr1_3:54992737-54992756 None:intergenic 25.0%
! TAACAATCAAATTACAGAAG+TGG - chr1_3:54992984-54993003 None:intergenic 25.0%
! CTTCTGTAATTTGATTGTTA+TGG + chr1_3:54992984-54993003 Msa0126080:intron 25.0%
! ATAGAAGATACAGAAAGTTA+AGG - chr1_3:54993364-54993383 None:intergenic 25.0%
! TTTATCTGTTCGTAACAAAT+GGG - chr1_3:54993479-54993498 None:intergenic 25.0%
!! TTTTATCTGTTCGTAACAAA+TGG - chr1_3:54993480-54993499 None:intergenic 25.0%
! TAAAAACTAAAGATATGGCA+CGG - chr1_3:54993741-54993760 None:intergenic 25.0%
! ATATCATACATCAAGCATTT+GGG + chr1_3:54993790-54993809 Msa0126080:intron 25.0%
! CGTAGAAATTTGAATTCAAT+CGG + chr1_3:54994058-54994077 Msa0126080:intron 25.0%
!! ACACAACTTTTTGACAATAA+GGG - chr1_3:54994335-54994354 None:intergenic 25.0%
!! TACACAACTTTTTGACAATA+AGG - chr1_3:54994336-54994355 None:intergenic 25.0%
! TGTTGTAAGATAGATATACA+TGG + chr1_3:54994358-54994377 Msa0126080:intron 25.0%
! TATTATAATGCTAGTAGCTT+AGG + chr1_3:54994700-54994719 Msa0126080:intron 25.0%
! ATGAGAGATGATATTATGAA+TGG + chr1_3:54994851-54994870 Msa0126080:intron 25.0%
! AAAGAAAAAAAAAAACAGCG+AGG + chr1_3:54995423-54995442 Msa0126080:intron 25.0%
! AGATGAAAAAATGGAAATCA+AGG - chr1_3:54995651-54995670 None:intergenic 25.0%
!! TAAAATATTTTCCTCACTCT+CGG + chr1_3:54995939-54995958 Msa0126080:intron 25.0%
! TATGAAAATAGTACAGTCTA+GGG - chr1_3:54996242-54996261 None:intergenic 25.0%
! ATATGAAAATAGTACAGTCT+AGG - chr1_3:54996243-54996262 None:intergenic 25.0%
!!! TATGACTATGTTGATTCATT+GGG + chr1_3:54997201-54997220 Msa0126080:CDS 25.0%
! TTATAGATAATAGATTGCTG+TGG + chr1_3:54997483-54997502 Msa0126080:three_prime_UTR 25.0%
! CATATATTATACTCTGTTTC+CGG + chr1_3:54997586-54997605 Msa0126080:three_prime_UTR 25.0%
TGAATTGAATTGGAATTTGG+AGG - chr1_3:54991280-54991299 None:intergenic 30.0%
TCTTCTGAATTCTGAATTGT+CGG + chr1_3:54991332-54991351 Msa0126080:five_prime_UTR 30.0%
! TGAATCAGAATTTTGTGTGT+TGG + chr1_3:54992049-54992068 Msa0126080:CDS 30.0%
! GAATCAGAATTTTGTGTGTT+GGG + chr1_3:54992050-54992069 Msa0126080:CDS 30.0%
! AATCAGAATTTTGTGTGTTG+GGG + chr1_3:54992051-54992070 Msa0126080:CDS 30.0%
!!! TCTTTAGGCTTTTTTGATGT+TGG + chr1_3:54992199-54992218 Msa0126080:intron 30.0%
!!! GTTGGATTTTTTGGTTGAAA+TGG + chr1_3:54992217-54992236 Msa0126080:intron 30.0%
! AGTTAATCCAAATCGCATTT+TGG - chr1_3:54992343-54992362 None:intergenic 30.0%
TTTAATGTAACCAGATGTGT+TGG - chr1_3:54992526-54992545 None:intergenic 30.0%
AACACAGGAAATTAATCTGA+TGG + chr1_3:54992664-54992683 Msa0126080:intron 30.0%
ACACAGGAAATTAATCTGAT+GGG + chr1_3:54992665-54992684 Msa0126080:intron 30.0%
! AATTTTTCTCCTTGGCATAT+TGG + chr1_3:54992701-54992720 Msa0126080:intron 30.0%
! AGAACTAATTTGCCTAAAGT+GGG - chr1_3:54993102-54993121 None:intergenic 30.0%
! AAGAACTAATTTGCCTAAAG+TGG - chr1_3:54993103-54993122 None:intergenic 30.0%
! ATACCAAGTTGACTATTCAT+TGG + chr1_3:54993249-54993268 Msa0126080:intron 30.0%
ATACCAATGAATAGTCAACT+TGG - chr1_3:54993255-54993274 None:intergenic 30.0%
TTGGTATTAGAGACAACAAA+TGG + chr1_3:54993268-54993287 Msa0126080:intron 30.0%
TAATGAATTCTGTTTGCATG+AGG - chr1_3:54993450-54993469 None:intergenic 30.0%
TACGAACAGATAAAAAGTGA+AGG + chr1_3:54993485-54993504 Msa0126080:intron 30.0%
ATAACTGTATCAGTAGAAGA+TGG - chr1_3:54993600-54993619 None:intergenic 30.0%
AATTCTTGTATTCTCATAGC+CGG + chr1_3:54993764-54993783 Msa0126080:intron 30.0%
CATATCATACATCAAGCATT+TGG + chr1_3:54993789-54993808 Msa0126080:intron 30.0%
!! AATAATAACTTGCTGTGAGT+TGG - chr1_3:54994098-54994117 None:intergenic 30.0%
AAATGCAAACACACATATTG+GGG - chr1_3:54994166-54994185 None:intergenic 30.0%
CAAATGCAAACACACATATT+GGG - chr1_3:54994167-54994186 None:intergenic 30.0%
ACAAATGCAAACACACATAT+TGG - chr1_3:54994168-54994187 None:intergenic 30.0%
ACAGTCTTGATCAATCATAA+TGG - chr1_3:54994208-54994227 None:intergenic 30.0%
!! TCCTGTGTTTTTCAAATTAG+CGG - chr1_3:54994511-54994530 None:intergenic 30.0%
ATAAATATATCTAGCGGTGT+CGG - chr1_3:54994536-54994555 None:intergenic 30.0%
TACAAGTAAGCAACTTTAAG+AGG - chr1_3:54994656-54994675 None:intergenic 30.0%
TATGTATTCCTAGTTTCTCA+CGG - chr1_3:54994745-54994764 None:intergenic 30.0%
CAAAATAGAAAGGTTACAGA+AGG + chr1_3:54994894-54994913 Msa0126080:intron 30.0%
! AAGGTTGATTCATATCAAAC+TGG + chr1_3:54994913-54994932 Msa0126080:intron 30.0%
! AGGTTGATTCATATCAAACT+GGG + chr1_3:54994914-54994933 Msa0126080:intron 30.0%
AAAGAAAGAAGCTCTATGTA+GGG + chr1_3:54995000-54995019 Msa0126080:intron 30.0%
! ATGATGAATTGCTGTTCTTT+AGG + chr1_3:54995033-54995052 Msa0126080:intron 30.0%
! TGATGAATTGCTGTTCTTTA+GGG + chr1_3:54995034-54995053 Msa0126080:intron 30.0%
TTTCAAAACGATTGCTATGT+AGG - chr1_3:54995078-54995097 None:intergenic 30.0%
TCAGATTCTGTTAAAAAACG+TGG + chr1_3:54995357-54995376 Msa0126080:intron 30.0%
ATTCTGTTAAAAAACGTGGA+TGG + chr1_3:54995361-54995380 Msa0126080:intron 30.0%
TAAATCTCCATGTTGTAAGT+AGG - chr1_3:54995780-54995799 None:intergenic 30.0%
ATGGAGATTTACTTGATGTA+TGG + chr1_3:54995789-54995808 Msa0126080:intron 30.0%
TGAATCAAACTGTTCATTTC+AGG - chr1_3:54995838-54995857 None:intergenic 30.0%
AATGAACAGTTTGATTCATG+TGG + chr1_3:54995840-54995859 Msa0126080:intron 30.0%
!!! ATCTTTTTTGTTGATCAGCA+TGG + chr1_3:54995903-54995922 Msa0126080:intron 30.0%
TTATTTGTGGCACAATCATT+TGG - chr1_3:54996006-54996025 None:intergenic 30.0%
GTTGATATTGAACCTATACA+TGG - chr1_3:54996040-54996059 None:intergenic 30.0%
! ACATTCATTTTACTCAATCC+AGG + chr1_3:54996199-54996218 Msa0126080:intron 30.0%
ATGAAAATAGTACAGTCTAG+GGG - chr1_3:54996241-54996260 None:intergenic 30.0%
! ACATTCATTTTACTGAATCC+AGG + chr1_3:54996363-54996382 Msa0126080:intron 30.0%
TTAATGCTGTGTATATGTTC+AGG + chr1_3:54996726-54996745 Msa0126080:intron 30.0%
TACTTTACCTGTGTAACATT+AGG - chr1_3:54996940-54996959 None:intergenic 30.0%
GGTTAAGATCTCACATAAAA+GGG - chr1_3:54996981-54997000 None:intergenic 30.0%
AGGTTAAGATCTCACATAAA+AGG - chr1_3:54996982-54997001 None:intergenic 30.0%
TCTTAACCTCAATTCATATG+TGG + chr1_3:54996993-54997012 Msa0126080:intron 30.0%
!! GTATGACTATGTTGATTCAT+TGG + chr1_3:54997200-54997219 Msa0126080:CDS 30.0%
AAAATTAGCACTCTCACTAA+AGG + chr1_3:54997287-54997306 Msa0126080:CDS 30.0%
! ATCAAGCATATAGCTTTACA+TGG + chr1_3:54997544-54997563 Msa0126080:three_prime_UTR 30.0%
!! ATCTGGAACACATTTTTAAC+CGG - chr1_3:54997608-54997627 None:intergenic 30.0%
! AAAACCATACTCTAAAGATC+TGG - chr1_3:54997625-54997644 None:intergenic 30.0%
!!! AGATCTTTAGAGTATGGTTT+TGG + chr1_3:54997624-54997643 Msa0126080:three_prime_UTR 30.0%
! TCTGCTACATCAGACATTTT+TGG - chr1_3:54991385-54991404 None:intergenic 35.0%
!!! AGCAATCGGTTTTGGATTAT+GGG + chr1_3:54991702-54991721 Msa0126080:CDS 35.0%
!!! AATTTGTAGCTGCTTTTGAG+AGG + chr1_3:54991851-54991870 Msa0126080:CDS 35.0%
!!! ATTTGTAGCTGCTTTTGAGA+GGG + chr1_3:54991852-54991871 Msa0126080:CDS 35.0%
ACTCACAAAATTCGGCTTAA+AGG - chr1_3:54991893-54991912 None:intergenic 35.0%
AAACCCTCACTCACAAAATT+CGG - chr1_3:54991901-54991920 None:intergenic 35.0%
TTCAACAGGTATGGTTCTTT+AGG + chr1_3:54992184-54992203 Msa0126080:intron 35.0%
TTGGTTGAAATGGATGCAAA+TGG + chr1_3:54992227-54992246 Msa0126080:intron 35.0%
TGGTTGAAATGGATGCAAAT+GGG + chr1_3:54992228-54992247 Msa0126080:intron 35.0%
!! AATGGATGCAAATGGGTTAA+TGG + chr1_3:54992235-54992254 Msa0126080:intron 35.0%
!! ATGGATGCAAATGGGTTAAT+GGG + chr1_3:54992236-54992255 Msa0126080:intron 35.0%
!! GGGTGTTATGTTTTTGTGTT+TGG + chr1_3:54992257-54992276 Msa0126080:intron 35.0%
TTATTACCATGTCTACGTGT+TGG + chr1_3:54992565-54992584 Msa0126080:intron 35.0%
TTTGCATTATATGTTTGCGG+TGG + chr1_3:54992639-54992658 Msa0126080:intron 35.0%
! TTCCTGTGAATTTTTCTCCT+TGG + chr1_3:54992693-54992712 Msa0126080:intron 35.0%
! TTAGAAAGTGACTGTTTCTC+TGG + chr1_3:54992889-54992908 Msa0126080:intron 35.0%
TCAAATTACAGAAGTGGAGA+AGG - chr1_3:54992978-54992997 None:intergenic 35.0%
AATAGTGCAAACAAGAGTGA+AGG - chr1_3:54993205-54993224 None:intergenic 35.0%
!! TATGACTTGGTCAAAGAGAA+AGG - chr1_3:54993407-54993426 None:intergenic 35.0%
ATTCTTGTATTCTCATAGCC+GGG + chr1_3:54993765-54993784 Msa0126080:intron 35.0%
TAGTTAATAAGACATCCCTG+TGG - chr1_3:54993849-54993868 None:intergenic 35.0%
ATACCCTTACTTCAAGAGTA+AGG - chr1_3:54994142-54994161 None:intergenic 35.0%
AATGCAAACACACATATTGG+GGG - chr1_3:54994165-54994184 None:intergenic 35.0%
GATTGATCAAGACTGTATGT+TGG + chr1_3:54994212-54994231 Msa0126080:intron 35.0%
TGTATTTCCTTTCTTAGCTC+AGG + chr1_3:54994262-54994281 Msa0126080:intron 35.0%
!!! TAGTTTTAGCCTTAGTCTCA+TGG + chr1_3:54994439-54994458 Msa0126080:intron 35.0%
ACCGCTAATTTGAAAAACAC+AGG + chr1_3:54994507-54994526 Msa0126080:intron 35.0%
! AAGTAAGCAACTTTAAGAGG+TGG - chr1_3:54994653-54994672 None:intergenic 35.0%
CTCATCTCTCGCAATATAAT+AGG - chr1_3:54994836-54994855 None:intergenic 35.0%
GAAAGAAAGAAGCTCTATGT+AGG + chr1_3:54994999-54995018 Msa0126080:intron 35.0%
CCAAAGAAAAGTAGAACAGT+GGG - chr1_3:54995105-54995124 None:intergenic 35.0%
!! CCACTGTTCTACTTTTCTTT+GGG + chr1_3:54995103-54995122 Msa0126080:intron 35.0%
!! CACTGTTCTACTTTTCTTTG+GGG + chr1_3:54995104-54995123 Msa0126080:intron 35.0%
!!! TACTTTTCTTTGGGGTGTAT+CGG + chr1_3:54995112-54995131 Msa0126080:intron 35.0%
TAAGTGTCTCTCTCTAATGA+CGG + chr1_3:54995475-54995494 Msa0126080:intron 35.0%
!! AATGACGGGTAAATGATTAC+AGG + chr1_3:54995490-54995509 Msa0126080:intron 35.0%
!! ATGACGGGTAAATGATTACA+GGG + chr1_3:54995491-54995510 Msa0126080:intron 35.0%
!! GCAGGTTCTAGATGAAAAAA+TGG - chr1_3:54995660-54995679 None:intergenic 35.0%
CAGTTGCTGCTATATGATAA+CGG - chr1_3:54995751-54995770 None:intergenic 35.0%
ATATTTCATAACCGAGAGTG+AGG - chr1_3:54995953-54995972 None:intergenic 35.0%
CTCTCGGTTATGAAATATCT+AGG + chr1_3:54995955-54995974 Msa0126080:intron 35.0%
TTGTGCCACAAATAACTTCA+TGG + chr1_3:54996011-54996030 Msa0126080:intron 35.0%
GGTTACCATGAAGTTATTTG+TGG - chr1_3:54996019-54996038 None:intergenic 35.0%
ACTTCATGGTAACCATGTAT+AGG + chr1_3:54996025-54996044 Msa0126080:intron 35.0%
AAATAGTAGTCTCGAATCTC+AGG - chr1_3:54996073-54996092 None:intergenic 35.0%
!! TTTTACTCAATCCAGGTTGA+AGG + chr1_3:54996206-54996225 Msa0126080:intron 35.0%
TGAAAATAGTACAGTCTAGG+GGG - chr1_3:54996240-54996259 None:intergenic 35.0%
!! TTTTACTGAATCCAGGTTGA+AGG + chr1_3:54996370-54996389 Msa0126080:intron 35.0%
ACAGGGAAAAACACAAATCA+TGG - chr1_3:54996640-54996659 None:intergenic 35.0%
CCAAATAAAAGCCTAAGCAA+GGG - chr1_3:54996675-54996694 None:intergenic 35.0%
!! CCTTGCTTAGGCTTTTATTT+GGG + chr1_3:54996673-54996692 Msa0126080:intron 35.0%
!! GGCTTTTATTTGGGAAATCT+TGG + chr1_3:54996682-54996701 Msa0126080:intron 35.0%
! GTAACATTAGGTCCTTTTTC+AGG - chr1_3:54996928-54996947 None:intergenic 35.0%
AAAAGGACCTAATGTTACAC+AGG + chr1_3:54996930-54996949 Msa0126080:CDS 35.0%
GGTAAACCACATATGAATTG+AGG - chr1_3:54997002-54997021 None:intergenic 35.0%
AGAAACTAAAAAGGGAGTGA+AGG - chr1_3:54997023-54997042 None:intergenic 35.0%
!!! CCTACAATTTTGATTGGAAG+TGG - chr1_3:54997110-54997129 None:intergenic 35.0%
CCACTTCCAATCAAAATTGT+AGG + chr1_3:54997107-54997126 Msa0126080:intron 35.0%
!! CCAACACCTACAATTTTGAT+TGG - chr1_3:54997116-54997135 None:intergenic 35.0%
CCAATCAAAATTGTAGGTGT+TGG + chr1_3:54997113-54997132 Msa0126080:intron 35.0%
!! CAAAATTGTAGGTGTTGGTA+CGG + chr1_3:54997118-54997137 Msa0126080:intron 35.0%
!! TGTTCCAGATCTTTAGAGTA+TGG + chr1_3:54997618-54997637 Msa0126080:three_prime_UTR 35.0%
GCGTGAAGTGAATAAATTCG+TGG - chr1_3:54991243-54991262 None:intergenic 40.0%
GGAATTTGGAGGAAGAAGAA+GGG - chr1_3:54991269-54991288 None:intergenic 40.0%
TGGAATTTGGAGGAAGAAGA+AGG - chr1_3:54991270-54991289 None:intergenic 40.0%
!! ATTCTGAATTGTCGGTGCTA+AGG + chr1_3:54991340-54991359 Msa0126080:five_prime_UTR 40.0%
!! TTCTGAATTGTCGGTGCTAA+GGG + chr1_3:54991341-54991360 Msa0126080:five_prime_UTR 40.0%
TTCTGATTGGGATGACGATT+GGG - chr1_3:54991590-54991609 None:intergenic 40.0%
GGGTAATTTGATAAGCTTCC+AGG - chr1_3:54991644-54991663 None:intergenic 40.0%
TGAGATTAACCCTAGACTAC+CGG - chr1_3:54991680-54991699 None:intergenic 40.0%
!!! GAGCAATCGGTTTTGGATTA+TGG + chr1_3:54991701-54991720 Msa0126080:CDS 40.0%
GGTGTTCTTTCATATTCGCT+TGG + chr1_3:54991733-54991752 Msa0126080:CDS 40.0%
! TAAGCCGAATTTTGTGAGTG+AGG + chr1_3:54991894-54991913 Msa0126080:CDS 40.0%
! AAGCCGAATTTTGTGAGTGA+GGG + chr1_3:54991895-54991914 Msa0126080:CDS 40.0%
! TTTTGTGAGTGAGGGTTTCA+TGG + chr1_3:54991903-54991922 Msa0126080:CDS 40.0%
!! ATACACCGGAGTTTTGTAGA+AGG + chr1_3:54991995-54992014 Msa0126080:CDS 40.0%
! TTGTAGAAGGACGCTTTGTT+CGG + chr1_3:54992008-54992027 Msa0126080:CDS 40.0%
! AGAATTTTGTGTGTTGGGGT+GGG + chr1_3:54992055-54992074 Msa0126080:CDS 40.0%
GGAATATTCGTGCTAGTGAA+GGG + chr1_3:54992076-54992095 Msa0126080:CDS 40.0%
!! TGGATGCAAATGGGTTAATG+GGG + chr1_3:54992237-54992256 Msa0126080:intron 40.0%
!! AACCAGATGTGTTGGTGTTA+GGG - chr1_3:54992518-54992537 None:intergenic 40.0%
! TAACCAGATGTGTTGGTGTT+AGG - chr1_3:54992519-54992538 None:intergenic 40.0%
GATACCTACGAAACACCAAA+GGG - chr1_3:54992612-54992631 None:intergenic 40.0%
TGATACCTACGAAACACCAA+AGG - chr1_3:54992613-54992632 None:intergenic 40.0%
TGCCAAGGAGAAAAATTCAC+AGG - chr1_3:54992698-54992717 None:intergenic 40.0%
TCACTTTCTAAATCACGCAG+GGG - chr1_3:54992880-54992899 None:intergenic 40.0%
! GTCACTTTCTAAATCACGCA+GGG - chr1_3:54992881-54992900 None:intergenic 40.0%
! AGTCACTTTCTAAATCACGC+AGG - chr1_3:54992882-54992901 None:intergenic 40.0%
CAGCTTTCTGTATAACACGA+AGG - chr1_3:54992946-54992965 None:intergenic 40.0%
AATTACAGAAGTGGAGAAGG+AGG - chr1_3:54992975-54992994 None:intergenic 40.0%
CTGATTGATTGTCCCACTTT+AGG + chr1_3:54993087-54993106 Msa0126080:intron 40.0%
! AGAGAGTTCAAGGTGTCATA+GGG - chr1_3:54993163-54993182 None:intergenic 40.0%
! AAGAGAGTTCAAGGTGTCAT+AGG - chr1_3:54993164-54993183 None:intergenic 40.0%
AGAAAGGCAAAGAGAGTTCA+AGG - chr1_3:54993173-54993192 None:intergenic 40.0%
AAACAAGAGTGAAGGTAGGT+AGG - chr1_3:54993197-54993216 None:intergenic 40.0%
TCAACTTGGTATTAGAGACC+CGG - chr1_3:54993241-54993260 None:intergenic 40.0%
AAATCATTCCTCTTGTGCCT+AGG - chr1_3:54993340-54993359 None:intergenic 40.0%
GATGGTCAACATGTAGATAC+AGG - chr1_3:54993582-54993601 None:intergenic 40.0%
GCTTGATGTATGATATGACC+CGG - chr1_3:54993786-54993805 None:intergenic 40.0%
TGGGAATCTATTTACTCCAC+AGG + chr1_3:54993830-54993849 Msa0126080:intron 40.0%
GGGAATCTATTTACTCCACA+GGG + chr1_3:54993831-54993850 Msa0126080:intron 40.0%
ACGCCTTACTCTTGAAGTAA+GGG + chr1_3:54994136-54994155 Msa0126080:intron 40.0%
! CAAGACTGTATGTTGGTTGT+CGG + chr1_3:54994219-54994238 Msa0126080:intron 40.0%
GTTGAGTGCTAATAGTTGAG+TGG + chr1_3:54994300-54994319 Msa0126080:intron 40.0%
CTACAAATGCCATGAGACTA+AGG - chr1_3:54994451-54994470 None:intergenic 40.0%
CTTAGTCTCATGGCATTTGT+AGG + chr1_3:54994449-54994468 Msa0126080:intron 40.0%
CATTTGTAGGCTATGAAGCA+CGG + chr1_3:54994462-54994481 Msa0126080:intron 40.0%
! CAACTTTAAGAGGTGGAGTT+TGG - chr1_3:54994646-54994665 None:intergenic 40.0%
CTTCTTTCTTTCCTGTCATG+TGG - chr1_3:54994991-54995010 None:intergenic 40.0%
!! CCCACTGTTCTACTTTTCTT+TGG + chr1_3:54995102-54995121 Msa0126080:intron 40.0%
CCCAAAGAAAAGTAGAACAG+TGG - chr1_3:54995106-54995125 None:intergenic 40.0%
AGAGAGACACTTAACGCATT+GGG - chr1_3:54995468-54995487 None:intergenic 40.0%
AAGTGTCTCTCTCTAATGAC+GGG + chr1_3:54995476-54995495 Msa0126080:intron 40.0%
GATTACCACTTTCCGACATT+AGG + chr1_3:54995556-54995575 Msa0126080:intron 40.0%
CTTCTTACGAGTCCTAATGT+CGG - chr1_3:54995571-54995590 None:intergenic 40.0%
TCACTACAACCTCAAAGCTA+TGG - chr1_3:54995601-54995620 None:intergenic 40.0%
! TCATCTAGAACCTGCTTTCT+AGG + chr1_3:54995665-54995684 Msa0126080:intron 40.0%
! CATCTAGAACCTGCTTTCTA+GGG + chr1_3:54995666-54995685 Msa0126080:intron 40.0%
! CTCTCAAGAGAGTTTTCTCA+TGG - chr1_3:54995716-54995735 None:intergenic 40.0%
CGTTATCATATAGCAGCAAC+TGG + chr1_3:54995749-54995768 Msa0126080:intron 40.0%
GGTGTTTCCTACTTACAACA+TGG + chr1_3:54995770-54995789 Msa0126080:intron 40.0%
GTTCATTTCAGGCTACTGAA+TGG - chr1_3:54995827-54995846 None:intergenic 40.0%
! AAGTGTCACTAACATCTCCT+CGG - chr1_3:54996407-54996426 None:intergenic 40.0%
ACGAACTAATGCACGCTTAA+GGG + chr1_3:54996489-54996508 Msa0126080:CDS 40.0%
AAGAGCAAGATGCTGCATAT+AGG + chr1_3:54996512-54996531 Msa0126080:CDS 40.0%
AGAGCAAGATGCTGCATATA+GGG + chr1_3:54996513-54996532 Msa0126080:CDS 40.0%
! AAGGGAACAAGTTGAGAACA+GGG - chr1_3:54996657-54996676 None:intergenic 40.0%
! CCCTTGCTTAGGCTTTTATT+TGG + chr1_3:54996672-54996691 Msa0126080:intron 40.0%
CCCAAATAAAAGCCTAAGCA+AGG - chr1_3:54996676-54996695 None:intergenic 40.0%
CTGTGTATATGTTCAGGCTA+GGG + chr1_3:54996732-54996751 Msa0126080:intron 40.0%
TATATGTTCAGGCTAGGGAA+CGG + chr1_3:54996737-54996756 Msa0126080:intron 40.0%
GAAGAGAAAGCTCAATCTCT+TGG + chr1_3:54996895-54996914 Msa0126080:CDS 40.0%
CTTGGTGAAGAACCTGAAAA+AGG + chr1_3:54996913-54996932 Msa0126080:CDS 40.0%
TAAAGATGTGACCTGCAGAT+AGG + chr1_3:54997393-54997412 Msa0126080:three_prime_UTR 40.0%
AAAGATGTGACCTGCAGATA+GGG + chr1_3:54997394-54997413 Msa0126080:three_prime_UTR 40.0%
GCTTACTTCCAAGCAATCAC+CGG + chr1_3:54991412-54991431 Msa0126080:CDS 45.0%
CTTGTAAACCGGTGATTGCT+TGG - chr1_3:54991423-54991442 None:intergenic 45.0%
TTCGAGGTCCCAATTATGAG+CGG - chr1_3:54991473-54991492 None:intergenic 45.0%
GTTCTGATTGGGATGACGAT+TGG - chr1_3:54991591-54991610 None:intergenic 45.0%
ATAAGCTTCCAGGCTAATCC+GGG - chr1_3:54991634-54991653 None:intergenic 45.0%
GATAAGCTTCCAGGCTAATC+CGG - chr1_3:54991635-54991654 None:intergenic 45.0%
! TTACCCGTCTCCGTTATTTC+CGG + chr1_3:54991658-54991677 Msa0126080:CDS 45.0%
! ACTACCGGAAATAACGGAGA+CGG - chr1_3:54991665-54991684 None:intergenic 45.0%
! TCCGTTATTTCCGGTAGTCT+AGG + chr1_3:54991667-54991686 Msa0126080:CDS 45.0%
CCCTAGACTACCGGAAATAA+CGG - chr1_3:54991671-54991690 None:intergenic 45.0%
! CCGTTATTTCCGGTAGTCTA+GGG + chr1_3:54991668-54991687 Msa0126080:CDS 45.0%
! GGTAGTCTAGGGTTAATCTC+AGG + chr1_3:54991679-54991698 Msa0126080:CDS 45.0%
GGGTTAATCTCAGGAGCAAT+CGG + chr1_3:54991688-54991707 Msa0126080:CDS 45.0%
!! ATCTCAGGAGCAATCGGTTT+TGG + chr1_3:54991694-54991713 Msa0126080:CDS 45.0%
TCATATTCGCTTGGCTTCGT+CGG + chr1_3:54991742-54991761 Msa0126080:CDS 45.0%
GCAGCAGATACAGAAACCAA+CGG - chr1_3:54991814-54991833 None:intergenic 45.0%
!!! GCTGCTTTTGAGAGGGATTA+TGG + chr1_3:54991859-54991878 Msa0126080:CDS 45.0%
!! GCTTTTGAGAGGGATTATGG+CGG + chr1_3:54991862-54991881 Msa0126080:CDS 45.0%
GTTTCATGGATGCGTTACAG+CGG + chr1_3:54991917-54991936 Msa0126080:CDS 45.0%
TCCTGATCATCCTGATACAC+CGG + chr1_3:54991981-54992000 Msa0126080:CDS 45.0%
CTACAAAACTCCGGTGTATC+AGG - chr1_3:54991994-54992013 None:intergenic 45.0%
AGCGTCCTTCTACAAAACTC+CGG - chr1_3:54992003-54992022 None:intergenic 45.0%
!! GCTTTGTTCGGAGGTTTTTG+TGG + chr1_3:54992020-54992039 Msa0126080:CDS 45.0%
! CAGAATTTTGTGTGTTGGGG+TGG + chr1_3:54992054-54992073 Msa0126080:CDS 45.0%
GGGAATATTCGTGCTAGTGA+AGG + chr1_3:54992075-54992094 Msa0126080:CDS 45.0%
!! GTAATAGTTTGAAGGCGTCG+AGG + chr1_3:54992109-54992128 Msa0126080:CDS 45.0%
! TCCGTTTTGTGCTCTTGTCA+TGG + chr1_3:54992134-54992153 Msa0126080:CDS 45.0%
! GCCATGACAAGAGCACAAAA+CGG - chr1_3:54992138-54992157 None:intergenic 45.0%
CACGTGTCCAAAATGCGATT+TGG + chr1_3:54992333-54992352 Msa0126080:intron 45.0%
ACAACACCAACACGTAGACA+TGG - chr1_3:54992574-54992593 None:intergenic 45.0%
ATGTTTGCGGTGGATAACAC+AGG + chr1_3:54992649-54992668 Msa0126080:intron 45.0%
CAGGTGTATCCAATATGCCA+AGG - chr1_3:54992713-54992732 None:intergenic 45.0%
CTTGGCATATTGGATACACC+TGG + chr1_3:54992711-54992730 Msa0126080:intron 45.0%
! CACGTATTGATAAATCGGCC+AGG - chr1_3:54992732-54992751 None:intergenic 45.0%
AAGAAAGCTGTGGGGAATTG+TGG - chr1_3:54993040-54993059 None:intergenic 45.0%
AGAGACAGAAGAAAGCTGTG+GGG - chr1_3:54993048-54993067 None:intergenic 45.0%
CAGAGACAGAAGAAAGCTGT+GGG - chr1_3:54993049-54993068 None:intergenic 45.0%
ACAGAGACAGAAGAAAGCTG+TGG - chr1_3:54993050-54993069 None:intergenic 45.0%
CAATGGAGAGACGCAAATGA+TGG - chr1_3:54993137-54993156 None:intergenic 45.0%
! AAGGTGTCATAGGGAGTCAA+TGG - chr1_3:54993154-54993173 None:intergenic 45.0%
GTGAAGGTAGGTAGGAAGAA+AGG - chr1_3:54993189-54993208 None:intergenic 45.0%
GTGCAAACAAGAGTGAAGGT+AGG - chr1_3:54993201-54993220 None:intergenic 45.0%
ACTATTCACGTATCACCGAC+CGG + chr1_3:54993219-54993238 Msa0126080:intron 45.0%
ATCAAGATCCTAGGCACAAG+AGG + chr1_3:54993329-54993348 Msa0126080:intron 45.0%
TTGACCAAGTCATACTTCCC+CGG + chr1_3:54993413-54993432 Msa0126080:intron 45.0%
TTCTGTTTGCATGAGGACTG+AGG - chr1_3:54993443-54993462 None:intergenic 45.0%
CACGCCTTACTCTTGAAGTA+AGG + chr1_3:54994135-54994154 Msa0126080:intron 45.0%
AATACAGACGCGCATATGTG+CGG - chr1_3:54994248-54994267 None:intergenic 45.0%
GGGCAAAGAGAGAATTTCAG+AGG + chr1_3:54994934-54994953 Msa0126080:intron 45.0%
!! TTCTTTGGGGTGTATCGGTT+TGG + chr1_3:54995117-54995136 Msa0126080:intron 45.0%
ATATGACGCTTGTCAGATGC+TGG - chr1_3:54995231-54995250 None:intergenic 45.0%
GCATCTGACAAGCGTCATAT+CGG + chr1_3:54995231-54995250 Msa0126080:intron 45.0%
AACGTGGATGGAAAAAGCCA+TGG + chr1_3:54995373-54995392 Msa0126080:intron 45.0%
ACGTGGATGGAAAAAGCCAT+GGG + chr1_3:54995374-54995393 Msa0126080:intron 45.0%
AAAAGCCATGGGGACTAAGT+AGG + chr1_3:54995385-54995404 Msa0126080:intron 45.0%
GAGAGAGACACTTAACGCAT+TGG - chr1_3:54995469-54995488 None:intergenic 45.0%
! AGTCCATCTCCATAGCTTTG+AGG + chr1_3:54995589-54995608 Msa0126080:intron 45.0%
CAACCTCAAAGCTATGGAGA+TGG - chr1_3:54995595-54995614 None:intergenic 45.0%
TTGCTCTATCCCTAGAAAGC+AGG - chr1_3:54995678-54995697 None:intergenic 45.0%
! AGTACAGTCTAGGGGGATTT+TGG - chr1_3:54996233-54996252 None:intergenic 45.0%
! AGTGTCACTAACATCTCCTC+GGG - chr1_3:54996406-54996425 None:intergenic 45.0%
GACGAACTAATGCACGCTTA+AGG + chr1_3:54996488-54996507 Msa0126080:CDS 45.0%
! CAAGGGAACAAGTTGAGAAC+AGG - chr1_3:54996658-54996677 None:intergenic 45.0%
! CTCAACTTGTTCCCTTGCTT+AGG + chr1_3:54996661-54996680 Msa0126080:intron 45.0%
GCTGTGTATATGTTCAGGCT+AGG + chr1_3:54996731-54996750 Msa0126080:intron 45.0%
AAGAGGAAGAACGTCTTGCA+AGG + chr1_3:54996770-54996789 Msa0126080:CDS 45.0%
AGAGGAAGAACGTCTTGCAA+GGG + chr1_3:54996771-54996790 Msa0126080:CDS 45.0%
TGAAGCTGAGAGAAAGCTCA+AGG + chr1_3:54996801-54996820 Msa0126080:CDS 45.0%
GAGAAAGCTCAAGGAAGAAG+AGG + chr1_3:54996810-54996829 Msa0126080:CDS 45.0%
AAAGCTCAAGGAAGAAGAGG+AGG + chr1_3:54996813-54996832 Msa0126080:CDS 45.0%
CTTTCTTTGCGCACACCATT+GGG - chr1_3:54997147-54997166 None:intergenic 45.0%
! AACTTCCCTCGGGTTGTTTA+CGG + chr1_3:54997258-54997277 Msa0126080:CDS 45.0%
AAGATGTGACCTGCAGATAG+GGG + chr1_3:54997395-54997414 Msa0126080:three_prime_UTR 45.0%
GAGGTCGGGATCTTGTAAAC+CGG - chr1_3:54991434-54991453 None:intergenic 50.0%
AGATCCTCGCCGCTCATAAT+TGG + chr1_3:54991461-54991480 Msa0126080:CDS 50.0%
GATCCTCGCCGCTCATAATT+GGG + chr1_3:54991462-54991481 Msa0126080:CDS 50.0%
AAGATGAGATGGCGAGTTCG+AGG - chr1_3:54991489-54991508 None:intergenic 50.0%
! GGTGGTGGTGAAAGATGAGA+TGG - chr1_3:54991500-54991519 None:intergenic 50.0%
!! AGGGAGTGGTGGTTCTGATT+GGG - chr1_3:54991602-54991621 None:intergenic 50.0%
! CTACCGGAAATAACGGAGAC+GGG - chr1_3:54991664-54991683 None:intergenic 50.0%
!!! GGTTTTGGATTATGGGCTGC+TGG + chr1_3:54991709-54991728 Msa0126080:CDS 50.0%
! TTTGGATTATGGGCTGCTGG+TGG + chr1_3:54991712-54991731 Msa0126080:CDS 50.0%
TTTGAGAGGGATTATGGCGG+TGG + chr1_3:54991865-54991884 Msa0126080:CDS 50.0%
TCCGGTGTATCAGGATGATC+AGG - chr1_3:54991985-54992004 None:intergenic 50.0%
! TAGAAGGACGCTTTGTTCGG+AGG + chr1_3:54992011-54992030 Msa0126080:CDS 50.0%
GAGAATCGCGCTTCTTCAAC+AGG + chr1_3:54992170-54992189 Msa0126080:CDS 50.0%
TCGCGCTTCTTCAACAGGTA+TGG + chr1_3:54992175-54992194 Msa0126080:intron 50.0%
TGCCCTAACACCAACACATC+TGG + chr1_3:54992513-54992532 Msa0126080:intron 50.0%
GTCTGCTGTATGTGTCCCTT+TGG + chr1_3:54992594-54992613 Msa0126080:intron 50.0%
!! GTGTCCCTTTGGTGTTTCGT+AGG + chr1_3:54992605-54992624 Msa0126080:intron 50.0%
! CAGGGGCACAGTAAATACAG+GGG - chr1_3:54992863-54992882 None:intergenic 50.0%
! GCAGGGGCACAGTAAATACA+GGG - chr1_3:54992864-54992883 None:intergenic 50.0%
TTGTGGTTAGGAGGCTGGAA+GGG - chr1_3:54993023-54993042 None:intergenic 50.0%
ATTGTGGTTAGGAGGCTGGA+AGG - chr1_3:54993024-54993043 None:intergenic 50.0%
TGTGGGGAATTGTGGTTAGG+AGG - chr1_3:54993032-54993051 None:intergenic 50.0%
AGCTGTGGGGAATTGTGGTT+AGG - chr1_3:54993035-54993054 None:intergenic 50.0%
! GGAGAGACGCAAATGATGGA+CGG - chr1_3:54993133-54993152 None:intergenic 50.0%
CTATTCACGTATCACCGACC+GGG + chr1_3:54993220-54993239 Msa0126080:intron 50.0%
CTTGGTATTAGAGACCCGGT+CGG - chr1_3:54993237-54993256 None:intergenic 50.0%
GAGAGAGCTCTTGACTAGCA+GGG + chr1_3:54993290-54993309 Msa0126080:intron 50.0%
AGAGAGCTCTTGACTAGCAG+GGG + chr1_3:54993291-54993310 Msa0126080:intron 50.0%
CCTAGGATCTTGATGTCAGG+AGG - chr1_3:54993323-54993342 None:intergenic 50.0%
CCTCCTGACATCAAGATCCT+AGG + chr1_3:54993320-54993339 Msa0126080:intron 50.0%
GTGCCTAGGATCTTGATGTC+AGG - chr1_3:54993326-54993345 None:intergenic 50.0%
! AGAAAGGTGCGTGACAGAGA+GGG - chr1_3:54993391-54993410 None:intergenic 50.0%
! AGAACCGGGGAAGTATGACT+TGG - chr1_3:54993420-54993439 None:intergenic 50.0%
GGTTTCACACACGCACAAGT+GGG + chr1_3:54993811-54993830 Msa0126080:intron 50.0%
CGAGCTTCCTGAGCTAAGAA+AGG - chr1_3:54994272-54994291 None:intergenic 50.0%
GTCACATGCCGTGAGAAACT+AGG + chr1_3:54994734-54994753 Msa0126080:intron 50.0%
GCTGTTCAGATCCACATGAC+AGG + chr1_3:54994977-54994996 Msa0126080:intron 50.0%
! AGAACGGGTTTGGAGAGACA+CGG - chr1_3:54995151-54995170 None:intergenic 50.0%
ACTAACACGTGTCCGACACT+GGG + chr1_3:54995273-54995292 Msa0126080:intron 50.0%
CGTGGATGGAAAAAGCCATG+GGG + chr1_3:54995375-54995394 Msa0126080:intron 50.0%
TCAAGCCTACTTAGTCCCCA+TGG - chr1_3:54995393-54995412 None:intergenic 50.0%
CGAGTCCTAATGTCGGAAAG+TGG - chr1_3:54995564-54995583 None:intergenic 50.0%
! GGGATTTTGGACCTTCAACC+TGG - chr1_3:54996220-54996239 None:intergenic 50.0%
! GGGATTTTGGACCTTCAACC+TGG - chr1_3:54996220-54996239 None:intergenic 50.0%
! AACATCTCCTCGGGGGATTT+TGG - chr1_3:54996397-54996416 None:intergenic 50.0%
TGTCACTAACATCTCCTCGG+GGG - chr1_3:54996404-54996423 None:intergenic 50.0%
! GTGTCACTAACATCTCCTCG+GGG - chr1_3:54996405-54996424 None:intergenic 50.0%
CCTTGCTGCAACAAGAACTG+GGG - chr1_3:54996452-54996471 None:intergenic 50.0%
GCCTTGCTGCAACAAGAACT+GGG - chr1_3:54996453-54996472 None:intergenic 50.0%
AGCCTTGCTGCAACAAGAAC+TGG - chr1_3:54996454-54996473 None:intergenic 50.0%
! GTGTTGGTACGGTTTCCCAA+TGG + chr1_3:54997129-54997148 Msa0126080:CDS 50.0%
CCTTTCTTTGCGCACACCAT+TGG - chr1_3:54997148-54997167 None:intergenic 50.0%
CCAATGGTGTGCGCAAAGAA+AGG + chr1_3:54997145-54997164 Msa0126080:CDS 50.0%
ATGGTGTGCGCAAAGAAAGG+AGG + chr1_3:54997148-54997167 Msa0126080:CDS 50.0%
GCCTAGTCTCTAACTTCCCT+CGG + chr1_3:54997247-54997266 Msa0126080:CDS 50.0%
CCTAGTCTCTAACTTCCCTC+GGG + chr1_3:54997248-54997267 Msa0126080:CDS 50.0%
CTTGTCCGTAAACAACCCGA+GGG - chr1_3:54997266-54997285 None:intergenic 50.0%
TCTTGTCCGTAAACAACCCG+AGG - chr1_3:54997267-54997286 None:intergenic 50.0%
GCACTCTCACTAAAGGAAGC+TGG + chr1_3:54997294-54997313 Msa0126080:CDS 50.0%
TTTGTGGAGCTCGGTTCATG+AGG + chr1_3:54997339-54997358 Msa0126080:CDS 50.0%
AGATGTGACCTGCAGATAGG+GGG + chr1_3:54997396-54997415 Msa0126080:three_prime_UTR 50.0%
AGGATCTCGTTGCAGAGGTC+GGG - chr1_3:54991448-54991467 None:intergenic 55.0%
GAGGATCTCGTTGCAGAGGT+CGG - chr1_3:54991449-54991468 None:intergenic 55.0%
!! GAGGGAGTGGTGGTTCTGAT+TGG - chr1_3:54991603-54991622 None:intergenic 55.0%
CAGACGATGAGTTTGGACCG+AGG - chr1_3:54991768-54991787 None:intergenic 55.0%
GCAGCAGCAGACGATGAGTT+TGG - chr1_3:54991775-54991794 None:intergenic 55.0%
GTTAGGGCAGTGTCAGGTGT+AGG - chr1_3:54992502-54992521 None:intergenic 55.0%
!! GTTGGTGTTAGGGCAGTGTC+AGG - chr1_3:54992508-54992527 None:intergenic 55.0%
! CGCAGGGGCACAGTAAATAC+AGG - chr1_3:54992865-54992884 None:intergenic 55.0%
TGTGGTTAGGAGGCTGGAAG+GGG - chr1_3:54993022-54993041 None:intergenic 55.0%
GGGAATTGTGGTTAGGAGGC+TGG - chr1_3:54993028-54993047 None:intergenic 55.0%
GGAGAGAGCTCTTGACTAGC+AGG + chr1_3:54993289-54993308 Msa0126080:intron 55.0%
! GAGAAAGGTGCGTGACAGAG+AGG - chr1_3:54993392-54993411 None:intergenic 55.0%
ATGAGGACTGAGGAGAACCG+GGG - chr1_3:54993433-54993452 None:intergenic 55.0%
CATGAGGACTGAGGAGAACC+GGG - chr1_3:54993434-54993453 None:intergenic 55.0%
GCATGAGGACTGAGGAGAAC+CGG - chr1_3:54993435-54993454 None:intergenic 55.0%
GGGTTTCACACACGCACAAG+TGG + chr1_3:54993810-54993829 Msa0126080:intron 55.0%
ATGAAGCACGGACTCCGACA+CGG + chr1_3:54994474-54994493 Msa0126080:intron 55.0%
!! CGGTGTTGTTGTGTCCGTGT+CGG - chr1_3:54994491-54994510 None:intergenic 55.0%
CACTAACACGTGTCCGACAC+TGG + chr1_3:54995272-54995291 Msa0126080:intron 55.0%
TGAAGCACGGACACTGCTTG+TGG - chr1_3:54995308-54995327 None:intergenic 55.0%
TGTCCGTGCTTCAGAGCTTG+TGG + chr1_3:54995315-54995334 Msa0126080:intron 55.0%
GTCCGTGCTTCAGAGCTTGT+GGG + chr1_3:54995316-54995335 Msa0126080:intron 55.0%
!! GTCCCACAAGCTCTGAAGCA+CGG - chr1_3:54995321-54995340 None:intergenic 55.0%
TGAAGGTCCAAAATCCCCCG+AGG + chr1_3:54996387-54996406 Msa0126080:CDS 55.0%
CCCCAGTTCTTGTTGCAGCA+AGG + chr1_3:54996449-54996468 Msa0126080:CDS 55.0%
GGAACGGCAGAGAAGAGAAG+AGG + chr1_3:54996753-54996772 Msa0126080:CDS 55.0%
CCCGAGGGAAGTTAGAGACT+AGG - chr1_3:54997251-54997270 None:intergenic 55.0%
GGAAGCTGGATTGCATCCTC+AGG + chr1_3:54997308-54997327 Msa0126080:CDS 55.0%
TCCTCAGGCCAGTCTGTTTG+TGG + chr1_3:54997323-54997342 Msa0126080:CDS 55.0%
!! TCCACAAACAGACTGGCCTG+AGG - chr1_3:54997327-54997346 None:intergenic 55.0%
GCCAGTCTGTTTGTGGAGCT+CGG + chr1_3:54997330-54997349 Msa0126080:CDS 55.0%
ACCGAGCTCCACAAACAGAC+TGG - chr1_3:54997334-54997353 None:intergenic 55.0%
GATGTGACCTGCAGATAGGG+GGG + chr1_3:54997397-54997416 Msa0126080:three_prime_UTR 55.0%
GGTCCCAATTATGAGCGGCG+AGG - chr1_3:54991468-54991487 None:intergenic 60.0%
TTGGAATCATCGCCGCCGTG+AGG - chr1_3:54991538-54991557 None:intergenic 60.0%
!! CTAATCCGGGTGGTGGTGGA+GGG - chr1_3:54991621-54991640 None:intergenic 60.0%
TTCCAGGCTAATCCGGGTGG+TGG - chr1_3:54991628-54991647 None:intergenic 60.0%
AGCTTCCAGGCTAATCCGGG+TGG - chr1_3:54991631-54991650 None:intergenic 60.0%
! TCTGCTGCTGCTTCCTCTGC+TGG + chr1_3:54991784-54991803 Msa0126080:CDS 60.0%
TGGATGCGTTACAGCGGTCG+AGG + chr1_3:54991923-54991942 Msa0126080:CDS 60.0%
AAGGTGCGTGACAGAGAGGG+AGG - chr1_3:54993388-54993407 None:intergenic 60.0%
ACGGGTTTGGAGAGACACGG+CGG - chr1_3:54995148-54995167 None:intergenic 60.0%
TGGTGAGCGTGTCCCAGTGT+CGG - chr1_3:54995288-54995307 None:intergenic 60.0%
CCATTGTCCCCCCTATCTGC+AGG - chr1_3:54997407-54997426 None:intergenic 60.0%
CCTGCAGATAGGGGGGACAA+TGG + chr1_3:54997404-54997423 Msa0126080:three_prime_UTR 60.0%
CGGCGAGGATCTCGTTGCAG+AGG - chr1_3:54991453-54991472 None:intergenic 65.0%
ACCGCCACCGACACTCCTCA+CGG + chr1_3:54991520-54991539 Msa0126080:CDS 65.0%
! ATCGCCGCCGTGAGGAGTGT+CGG - chr1_3:54991530-54991549 None:intergenic 65.0%
!! GCTAATCCGGGTGGTGGTGG+AGG - chr1_3:54991622-54991641 None:intergenic 65.0%
! CAGGCTAATCCGGGTGGTGG+TGG - chr1_3:54991625-54991644 None:intergenic 65.0%
!! CACCACCACCCGGATTAGCC+TGG + chr1_3:54991623-54991642 Msa0126080:CDS 65.0%
TCGCTTGGCTTCGTCGGCCT+CGG + chr1_3:54991748-54991767 Msa0126080:CDS 65.0%
TTCCTCTGCTGGCACGCCGT+TGG + chr1_3:54991795-54991814 Msa0126080:CDS 65.0%
AACCAACGGCGTGCCAGCAG+AGG - chr1_3:54991800-54991819 None:intergenic 65.0%
GGTTTGGAGAGACACGGCGG+AGG - chr1_3:54995145-54995164 None:intergenic 65.0%
GGCTCGTGAAAGAGCAGCGC+AGG + chr1_3:54996834-54996853 Msa0126080:CDS 65.0%
!! AGTGTCGGTGGCGGTGGTGG+TGG - chr1_3:54991515-54991534 None:intergenic 70.0%
!! AGGAGTGTCGGTGGCGGTGG+TGG - chr1_3:54991518-54991537 None:intergenic 70.0%
!! GTGAGGAGTGTCGGTGGCGG+TGG - chr1_3:54991521-54991540 None:intergenic 70.0%
!! GCCGTGAGGAGTGTCGGTGG+CGG - chr1_3:54991524-54991543 None:intergenic 70.0%
GCCACCGACACTCCTCACGG+CGG + chr1_3:54991523-54991542 Msa0126080:CDS 70.0%
!! GGTGGTGGTGGAGGGAGTGG+TGG - chr1_3:54991613-54991632 None:intergenic 70.0%
CCACTCCCTCCACCACCACC+CGG + chr1_3:54991613-54991632 Msa0126080:CDS 70.0%
!! GCCGCCGTGAGGAGTGTCGG+TGG - chr1_3:54991527-54991546 None:intergenic 75.0%
!! CCGGGTGGTGGTGGAGGGAG+TGG - chr1_3:54991616-54991635 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 54991174 54997653 54991174 ID=Msa0126080;Name=Msa0126080
chr1_3 mRNA 54991174 54997653 54991174 ID=Msa0126080-mRNA-1;Parent=Msa0126080;Name=Msa0126080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=214|1|1|1|1|1|4|294|469
chr1_3 exon 54991174 54992191 54991174 ID=Msa0126080-mRNA-1:exon:16992;Parent=Msa0126080-mRNA-1
chr1_3 exon 54996385 54996555 54996385 ID=Msa0126080-mRNA-1:exon:16993;Parent=Msa0126080-mRNA-1
chr1_3 exon 54996748 54996951 54996748 ID=Msa0126080-mRNA-1:exon:16994;Parent=Msa0126080-mRNA-1
chr1_3 exon 54997129 54997653 54997129 ID=Msa0126080-mRNA-1:exon:16995;Parent=Msa0126080-mRNA-1
chr1_3 five_prime_UTR 54991174 54991387 54991174 ID=Msa0126080-mRNA-1:five_prime_utr;Parent=Msa0126080-mRNA-1
chr1_3 CDS 54991388 54992191 54991388 ID=Msa0126080-mRNA-1:cds;Parent=Msa0126080-mRNA-1
chr1_3 CDS 54996385 54996555 54996385 ID=Msa0126080-mRNA-1:cds;Parent=Msa0126080-mRNA-1
chr1_3 CDS 54996748 54996951 54996748 ID=Msa0126080-mRNA-1:cds;Parent=Msa0126080-mRNA-1
chr1_3 CDS 54997129 54997359 54997129 ID=Msa0126080-mRNA-1:cds;Parent=Msa0126080-mRNA-1
chr1_3 three_prime_UTR 54997360 54997653 54997360 ID=Msa0126080-mRNA-1:three_prime_utr;Parent=Msa0126080-mRNA-1
Gene Sequence

>Msa0126080

ATGTCTGATGTAGCAGATAAACTCGCTTACTTCCAAGCAATCACCGGTTTACAAGATCCCGACCTCTGCAACGAGATCCTCGCCGCTCATAATTGGGACCTCGAACTCGCCATCTCATCTTTCACCACCACCACCGCCACCGACACTCCTCACGGCGGCGATGATTCCAATAACAACAACAACAACAATCATCTTCAATCCCAATCGTCATCCCAATCAGAACCACCACTCCCTCCACCACCACCCGGATTAGCCTGGAAGCTTATCAAATTACCCGTCTCCGTTATTTCCGGTAGTCTAGGGTTAATCTCAGGAGCAATCGGTTTTGGATTATGGGCTGCTGGTGGTGTTCTTTCATATTCGCTTGGCTTCGTCGGCCTCGGTCCAAACTCATCGTCTGCTGCTGCTTCCTCTGCTGGCACGCCGTTGGTTTCTGTATCTGCTGCGACGACAGAAGCGATGCAATTTGTAGCTGCTTTTGAGAGGGATTATGGCGGTGGTGCCTTTAAGCCGAATTTTGTGAGTGAGGGTTTCATGGATGCGTTACAGCGGTCGAGGAATTCGTTTAAGCTGTTGTTTGTTTACTTGCATTCTCCTGATCATCCTGATACACCGGAGTTTTGTAGAAGGACGCTTTGTTCGGAGGTTTTTGTGGAGTTTGTGAATCAGAATTTTGTGTGTTGGGGTGGGAATATTCGTGCTAGTGAAGGGTTTAAGATGAGTAATAGTTTGAAGGCGTCGAGGTTTCCGTTTTGTGCTCTTGTCATGGCTGCTACTAATCAGAGAATCGCGCTTCTTCAACAGGTTGAAGGTCCAAAATCCCCCGAGGAGATGTTAGTGACACTTCAGAGAGTGCTTGAAGAAAGTTCCCCAGTTCTTGTTGCAGCAAGGCTTGATGCAGAAGAAAGACGAACTAATGCACGCTTAAGGGAAGAGCAAGATGCTGCATATAGGGCTGCACTAGAAGCTGATCAAGCTAGGGAACGGCAGAGAAGAGAAGAGGAAGAACGTCTTGCAAGGGAAGCTGCTGAAGCTGAGAGAAAGCTCAAGGAAGAAGAGGAGGCTCGTGAAAGAGCAGCGCAGGAAGCTGCAGAGAAACAAGCAGCATTAGCTAAATTACGTGAAGAGAAAGCTCAATCTCTTGGTGAAGAACCTGAAAAAGGACCTAATGTTACACAGGTGTTGGTACGGTTTCCCAATGGTGTGCGCAAAGAAAGGAGGTTCAACAGCACAGTGACAATTCAATCTTTGTATGACTATGTTGATTCATTGGGTTGTTTAGAAGTCGAGAATTACAGCCTAGTCTCTAACTTCCCTCGGGTTGTTTACGGACAAGAAAAATTAGCACTCTCACTAAAGGAAGCTGGATTGCATCCTCAGGCCAGTCTGTTTGTGGAGCTCGGTTCATGA
Protein sequence

>Msa0126080

MSDVADKLAYFQAITGLQDPDLCNEILAAHNWDLELAISSFTTTTATDTPHGGDDSNNNNNNNHLQSQSSSQSEPPLPPPPPGLAWKLIKLPVSVISGSLGLISGAIGFGLWAAGGVLSYSLGFVGLGPNSSSAAASSAGTPLVSVSAATTEAMQFVAAFERDYGGGAFKPNFVSEGFMDALQRSRNSFKLLFVYLHSPDHPDTPEFCRRTLCSEVFVEFVNQNFVCWGGNIRASEGFKMSNSLKASRFPFCALVMAATNQRIALLQQVEGPKSPEEMLVTLQRVLEESSPVLVAARLDAEERRTNARLREEQDAAYRAALEADQARERQRREEEERLAREAAEAERKLKEEEEARERAAQEAAEKQAALAKLREEKAQSLGEEPEKGPNVTQVLVRFPNGVRKERRFNSTVTIQSLYDYVDSLGCLEVENYSLVSNFPRVVYGQEKLALSLKEAGLHPQASLFVELGS*