AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0126330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126330 MtrunA17_Chr1g0189211 98.132 1231 23 0 59 1289 1 1231 0.0 2511
Msa0126330 MtrunA17_Chr8g0380981 56.661 563 237 2 190 748 25 584 0.0 657
Msa0126330 MtrunA17_Chr8g0380981 33.613 238 130 4 1076 1285 816 1053 1.35e-32 137
Msa0126330 MtrunA17_Chr7g0261401 47.989 696 323 9 78 755 3 677 0.0 654
Msa0126330 MtrunA17_Chr2g0303101 56.610 590 248 4 183 770 27 610 0.0 653
Msa0126330 MtrunA17_Chr2g0303101 36.929 241 140 3 1056 1285 762 1001 4.86e-35 145
Msa0126330 MtrunA17_Chr5g0397501 40.380 421 210 7 317 728 295 683 3.72e-88 313
Msa0126330 MtrunA17_Chr5g0397501 58.108 74 27 1 203 276 23 92 1.09e-17 89.4
Msa0126330 MtrunA17_Chr5g0410721 30.199 553 293 15 204 741 85 559 2.82e-59 220
Msa0126330 MtrunA17_Chr1g0164731 29.705 542 280 16 205 728 42 500 2.58e-51 191
Msa0126330 MtrunA17_Chr3g0116441 33.773 379 169 12 208 570 18 330 1.97e-50 196
Msa0126330 MtrunA17_Chr1g0164761 27.273 616 327 17 206 806 6 515 2.04e-44 170
Msa0126330 MtrunA17_Chr1g0199511 43.784 185 91 2 419 595 295 474 8.37e-39 158
Msa0126330 MtrunA17_Chr7g0214951 38.760 129 62 5 429 555 88 201 3.25e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126330 AT1G08620.3 55.096 1256 482 22 62 1284 14 1220 0.0 1234
Msa0126330 AT1G08620.2 55.139 1255 481 22 63 1284 1 1206 0.0 1234
Msa0126330 AT1G08620.4 55.139 1255 481 22 63 1284 1 1206 0.0 1234
Msa0126330 AT1G08620.1 55.139 1255 481 22 63 1284 1 1206 0.0 1234
Msa0126330 AT4G20400.1 57.428 552 229 4 190 738 38 586 0.0 663
Msa0126330 AT4G20400.1 41.667 192 101 2 1076 1263 746 930 6.72e-38 155
Msa0126330 AT1G30810.3 58.036 560 224 6 189 744 40 592 0.0 652
Msa0126330 AT1G30810.3 48.299 147 70 2 1060 1206 648 788 7.32e-35 144
Msa0126330 AT1G30810.2 58.036 560 224 6 189 744 40 592 0.0 652
Msa0126330 AT1G30810.2 48.299 147 70 2 1060 1206 648 788 7.32e-35 144
Msa0126330 AT1G30810.1 58.036 560 224 6 189 744 40 592 0.0 652
Msa0126330 AT1G30810.1 48.299 147 70 2 1060 1206 648 788 7.32e-35 144
Msa0126330 AT4G20400.2 57.414 526 218 4 216 738 7 529 0.0 626
Msa0126330 AT4G20400.2 41.667 192 101 2 1076 1263 689 873 8.44e-38 154
Msa0126330 AT2G34880.1 55.258 561 215 11 190 737 43 580 0.0 615
Msa0126330 AT2G34880.1 45.333 150 78 1 1063 1212 636 781 2.24e-32 136
Msa0126330 AT2G38950.1 42.815 682 320 12 63 741 1 615 1.19e-167 516
Msa0126330 AT1G63490.1 41.568 421 204 7 317 728 39 426 1.73e-93 328
Msa0126330 AT1G63490.2 41.805 421 203 7 317 728 292 679 1.37e-92 328
Msa0126330 AT1G63490.2 54.930 71 28 1 208 278 31 97 2.41e-15 82.4
Msa0126330 AT1G63490.4 41.805 421 203 7 317 728 292 679 1.40e-92 328
Msa0126330 AT1G63490.4 54.930 71 28 1 208 278 31 97 2.39e-15 82.4
Msa0126330 AT5G46910.2 32.613 509 246 18 204 697 99 525 1.92e-58 214
Msa0126330 AT5G46910.1 32.613 509 246 18 204 697 99 525 9.31e-58 215
Msa0126330 AT3G48430.1 34.309 376 197 11 208 570 20 358 1.49e-45 180
Msa0126330 AT1G63490.3 39.662 237 122 5 496 728 1 220 1.49e-42 170
Msa0126330 AT5G04240.1 49.032 155 76 1 419 570 263 417 9.30e-41 165

Find 347 sgRNAs with CRISPR-Local

Find 1113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTACCTTCACTATTTC+TGG 0.085763 1_3:+55328829 None:intergenic
CGTAAGATCTTTGCTATTAA+AGG 0.127451 1_3:-55330656 Msa0126330:CDS
ACATACTTCTAGGTGCTTTA+TGG 0.157721 1_3:-55334722 Msa0126330:intron
GAATTTGGAGTTGTGCTTTC+TGG 0.173881 1_3:-55329903 Msa0126330:CDS
ACGTGGTTCGCCTCTATTTA+TGG 0.180896 1_3:-55329670 Msa0126330:intron
CCGGCCATTATTATTCATTT+TGG 0.192280 1_3:-55327323 Msa0126330:three_prime_UTR
ACCCTAGGTGATCGATTATT+TGG 0.199603 1_3:-55327623 Msa0126330:exon
GAGATATGCAGACGAGTTTA+AGG 0.201979 1_3:-55334978 Msa0126330:CDS
TAGAAAATAAAATTAGAAAA+AGG 0.211399 1_3:-55327458 Msa0126330:three_prime_UTR
CCCCTTAATCAAACCTGATT+TGG 0.215749 1_3:+55340545 None:intergenic
AATGTTTCCAAGGTAAATTC+TGG 0.245334 1_3:+55335004 None:intergenic
CTTCGTCCAACCTTAGTCTT+TGG 0.257535 1_3:-55327531 Msa0126330:three_prime_UTR
GAATAAAGTCCCCAGGGTTT+TGG 0.264163 1_3:+55333127 None:intergenic
GCCCAAATCAGGTTTGATTA+AGG 0.270581 1_3:-55340547 Msa0126330:CDS
ACACTTCGGATAATCTAAAA+TGG 0.273299 1_3:-55332885 Msa0126330:CDS
GATCTGGAAACTGGGAGTTT+TGG 0.275624 1_3:-55334695 Msa0126330:CDS
CATCCTGCTGGCAGCCTTGA+TGG 0.277204 1_3:-55328877 Msa0126330:CDS
CTACTGAGATATAAGAAGTT+AGG 0.295203 1_3:+55330870 None:intergenic
TATAATTCAATGAATATAAA+TGG 0.296555 1_3:+55333663 None:intergenic
TACAATGAGTTCAATTCTTC+CGG 0.298568 1_3:+55327730 None:intergenic
CCAAAGGTGTGCCAGTTTAT+AGG 0.298758 1_3:-55333155 Msa0126330:CDS
GAATTTGCTTGATCCACTAT+TGG 0.299776 1_3:+55330749 None:intergenic
TTCATTGAATTATATGCATC+TGG 0.305508 1_3:-55333654 Msa0126330:CDS
CCAACCTTCCAGCACTATTA+AGG 0.311202 1_3:-55330096 Msa0126330:CDS
GTCGAGTTTGTCATGAATAC+TGG 0.316021 1_3:-55327900 Msa0126330:CDS
CCCTTAATCAAACCTGATTT+GGG 0.321911 1_3:+55340546 None:intergenic
GCTGGCCAGACCAGTGTAAA+TGG 0.326405 1_3:-55327844 Msa0126330:CDS
GTGGTTCCTCATATGCTTGC+TGG 0.327847 1_3:-55330437 Msa0126330:CDS
ACTTCACAAAATCCTGCATT+AGG 0.330109 1_3:+55335052 None:intergenic
AATTAAGTGCAGTTTATAGA+TGG 0.330862 1_3:-55330916 Msa0126330:CDS
TGCAAAAGATGCATGCAAAT+TGG 0.331245 1_3:-55333603 Msa0126330:CDS
CTTAATAGTGCTGGAAGGTT+GGG 0.335439 1_3:+55330097 None:intergenic
CCTTTCTGACGGGAATTGTT+TGG 0.341322 1_3:+55329978 None:intergenic
AATGTTGAGCCTTTGGAATT+TGG 0.347465 1_3:-55329918 Msa0126330:CDS
TACGAGCAGTACATAAAATC+TGG 0.350384 1_3:-55334632 Msa0126330:CDS
TATGGAGCTGATCTGGAAAC+TGG 0.355790 1_3:-55334704 Msa0126330:CDS
TGTGGTCTACGAGCATCTTC+TGG 0.356321 1_3:+55335506 None:intergenic
CCTTTGCATGAGGTCATTGA+TGG 0.356999 1_3:-55336400 Msa0126330:CDS
CAACTGCAATGTTGAGCCTT+TGG 0.357071 1_3:-55329925 Msa0126330:CDS
CCGACTCGTCTCATTCTTCC+AGG 0.358823 1_3:-55330808 Msa0126330:CDS
TTGATGAGGGAAGTTGGGCT+TGG 0.359288 1_3:-55340569 Msa0126330:CDS
CTTGATGGCATCGAAATGTT+TGG 0.361417 1_3:-55328862 Msa0126330:CDS
AGCAACAAAATGCTGGGATA+TGG 0.363018 1_3:-55328968 Msa0126330:CDS
TTTCTCTATAACCTCCATTC+AGG 0.363260 1_3:+55327495 None:intergenic
GCGGTGCTTCGTGAAGATTC+AGG 0.363884 1_3:-55330317 Msa0126330:CDS
CCCAAATCAGGTTTGATTAA+GGG 0.368167 1_3:-55340546 Msa0126330:CDS
CTAAGAAGTATGATATCTTT+AGG 0.371235 1_3:+55330509 None:intergenic
TGAACCAAAATGAATAATAA+TGG 0.372299 1_3:+55327319 None:intergenic
ACTGGGGTAGAAGGTATAAT+TGG 0.374779 1_3:+55330239 None:intergenic
TATGAAACCAGTGATATATC+TGG 0.375280 1_3:-55334563 Msa0126330:CDS
CGGGTTTGATGAGGGAAGTT+GGG 0.376351 1_3:-55340574 Msa0126330:CDS
GAGGTTATAGAGAAAGAAAA+AGG 0.376925 1_3:-55327487 Msa0126330:three_prime_UTR
AAAGTCATGGTGCAGCATTC+AGG 0.377547 1_3:-55329880 Msa0126330:CDS
CCTTTGGACTTAAGAATAGA+AGG 0.379081 1_3:+55333171 None:intergenic
CATCCTCTGAGGACTCCTTT+AGG 0.379777 1_3:+55335926 None:intergenic
TTTGTGAAGTTGAAACATTT+GGG 0.380131 1_3:-55335039 Msa0126330:CDS
AGTTGGGCTTGGCCCAAATC+AGG 0.381899 1_3:-55340558 Msa0126330:CDS
TTCGTCCAACCTTAGTCTTT+GGG 0.384099 1_3:-55327530 Msa0126330:three_prime_UTR
GAAAGATCTACTGGGGTAGA+AGG 0.389159 1_3:+55330230 None:intergenic
CCTTTGCACTATCACTCAAT+TGG 0.389769 1_3:+55336184 None:intergenic
CCTATAAACTGGCACACCTT+TGG 0.390004 1_3:+55333155 None:intergenic
GTTCTCCACAGAAGGCTCTA+AGG 0.393810 1_3:+55334892 None:intergenic
GACTCTGAGATAAGAGAAAC+CGG 0.394344 1_3:-55340594 Msa0126330:CDS
AGCAATTGTGTTCATGCTCT+TGG 0.396351 1_3:-55331009 Msa0126330:CDS
ATTTCAGAAATTCTTGATGC+TGG 0.398808 1_3:-55329693 Msa0126330:CDS
GATAATCATGAGAGGTTTGA+TGG 0.404141 1_3:-55330062 Msa0126330:CDS
GGTGGGTGTGTGCTGATTCA+TGG 0.407700 1_3:+55327795 None:intergenic
GGTGGAGGTGGAAGTGATCA+AGG 0.407845 1_3:-55327823 Msa0126330:CDS
GGTGCTTTATGGAGCTGATC+TGG 0.412536 1_3:-55334711 Msa0126330:CDS
CTCATGATAAGCTATTGCTT+GGG 0.417910 1_3:-55332960 Msa0126330:CDS
TCTTGATTGAATTCACAAAC+AGG 0.420350 1_3:+55330599 None:intergenic
CGCTCCAGAGCTGAACCATA+TGG 0.422499 1_3:-55335292 Msa0126330:CDS
TTGTACAGGGAAGACGAATC+AGG 0.423546 1_3:-55336440 Msa0126330:intron
CCGGGTTTGATGAGGGAAGT+TGG 0.424987 1_3:-55340575 Msa0126330:CDS
CAGTTTAAGCTGGGAAGAAA+AGG 0.426603 1_3:-55328913 Msa0126330:CDS
ATATGAAAAGAAAGATCTAC+TGG 0.426723 1_3:+55330221 None:intergenic
TTGTGGAAAAGACGGTCTTT+TGG 0.428369 1_3:-55332854 Msa0126330:CDS
ATCGATCACCTAGGGTGGTT+GGG 0.430189 1_3:+55327630 None:intergenic
CAGTCAACTCAGGTTGGAAA+TGG 0.432685 1_3:-55336210 Msa0126330:CDS
AAATATTCTTGTTGAGGCAT+TGG 0.435779 1_3:-55330945 Msa0126330:CDS
CAAGGGCAGCTTTCACAAGC+TGG 0.435829 1_3:-55327862 Msa0126330:CDS
CCTTAATAGTGCTGGAAGGT+TGG 0.436594 1_3:+55330096 None:intergenic
TCTTCAGTGGGGTAGAAAAC+AGG 0.437666 1_3:+55335470 None:intergenic
ACAAGAATGGGAGTGGATAA+TGG 0.438444 1_3:-55335088 Msa0126330:CDS
TTTCTTTAATCAGGCTATTG+AGG 0.440771 1_3:-55327935 Msa0126330:intron
TTAATGTAGCTCCCGTTGAC+TGG 0.442935 1_3:-55333044 Msa0126330:CDS
GCCTTTCTTCCTCCTCTCAC+AGG 0.444777 1_3:+55344666 None:intergenic
AATAACTTTGCAAGGTTACC+AGG 0.445094 1_3:-55334599 Msa0126330:CDS
CTCATTATTCACATTGCTCC+TGG 0.445885 1_3:+55330790 None:intergenic
CTCGTATTGCAAAGGTTGTC+CGG 0.447988 1_3:-55329953 Msa0126330:CDS
GATAGCAAAACAGTTTAAGC+TGG 0.448678 1_3:-55328923 Msa0126330:CDS
GGGACTTCCGTCGGCCTCAA+GGG 0.449299 1_3:-55327879 Msa0126330:CDS
TCGGGCAGGTCATTGCTAGA+TGG 0.451167 1_3:-55335532 Msa0126330:intron
TTATTTAAAGTGACAGTGTT+TGG 0.453216 1_3:-55327404 Msa0126330:three_prime_UTR
ATGTTTCCAAGGTAAATTCT+GGG 0.454986 1_3:+55335005 None:intergenic
ACAGGAGCATTCTCAATTTG+TGG 0.457135 1_3:+55335488 None:intergenic
TACTGAGATATAAGAAGTTA+GGG 0.459115 1_3:+55330871 None:intergenic
TTAATAGTGCTGGAAGGTTG+GGG 0.459758 1_3:+55330098 None:intergenic
GACAATGCAAGAGCTGTTAA+CGG 0.461353 1_3:-55330017 Msa0126330:CDS
GCGAGGAACGGCTATGGCGG+AGG 0.461431 1_3:-55344691 None:intergenic
CGCTAATATCATAACGAAAG+AGG 0.463912 1_3:+55330972 None:intergenic
CTCCACCATTTACACTGGTC+TGG 0.464172 1_3:+55327839 None:intergenic
TGATGGGGACCGAGCTTATG+AGG 0.464713 1_3:-55336383 Msa0126330:CDS
CACAGATAGATATGCTTGCT+TGG 0.465453 1_3:-55331041 Msa0126330:CDS
AGATGTCAGATTCAAATAGA+AGG 0.468081 1_3:-55330463 Msa0126330:CDS
ATTGGGATCTGTTCAGCCGC+TGG 0.469647 1_3:+55327685 None:intergenic
CTTCCTCCTTTACATCCTGC+TGG 0.470384 1_3:-55328889 Msa0126330:CDS
GAAACATTTGGGTTTGAACC+TGG 0.471947 1_3:-55335028 Msa0126330:CDS
GCCTGTGAGAGGAGGAAGAA+AGG 0.472098 1_3:-55344667 Msa0126330:CDS
GTGACAGATGCTTCTGTGAC+GGG 0.472904 1_3:-55330356 Msa0126330:CDS
TTTCCTCGAGCCTACCACTC+TGG 0.473140 1_3:-55333099 Msa0126330:CDS
GTTCTTAGCCTTAATAGTGC+TGG 0.474222 1_3:+55330088 None:intergenic
CTAGAACCAGCAAGCATATG+AGG 0.475030 1_3:+55330431 None:intergenic
AGCCATCTCACGCGTAGGTA+TGG 0.475075 1_3:+55330682 None:intergenic
ACCAGCTTATGAAGCAAGTC+AGG 0.476038 1_3:+55333536 None:intergenic
AAGGAGAAGATGCACAAGAA+TGG 0.478896 1_3:-55335101 Msa0126330:CDS
TTAAAGTGACAGTGTTTGGA+TGG 0.479784 1_3:-55327400 Msa0126330:three_prime_UTR
ATATGTCAGCAACAAAATGC+TGG 0.483599 1_3:-55328975 Msa0126330:CDS
TATAGAGCTGTACCGGGAGC+AGG 0.483687 1_3:-55333001 Msa0126330:CDS
TCCAAGGTAAATTCTGGGCC+AGG 0.485498 1_3:+55335010 None:intergenic
AACCGCTATCGCACTTTCCA+TGG 0.488021 1_3:+55336127 None:intergenic
TCCCTAGGCACGTGTTGAGA+TGG 0.488807 1_3:-55331200 Msa0126330:intron
TGGGACTTCCGTCGGCCTCA+AGG 0.488914 1_3:-55327880 Msa0126330:CDS
GATGCTGCATTCCCTTTCAC+TGG 0.491538 1_3:+55331108 None:intergenic
CCATGTGGAAGCCAGTCAAC+GGG 0.493014 1_3:+55333033 None:intergenic
AGCTATTGCTTGGGGCTGCT+AGG 0.493060 1_3:-55332951 Msa0126330:CDS
ACAATACGGCAGATTCCATA+TGG 0.494785 1_3:+55335277 None:intergenic
TACCACTCTGGGTTCAATTG+TGG 0.495819 1_3:-55333087 Msa0126330:CDS
AAAATAATATGAAAAGGAAA+AGG 0.496493 1_3:-55335120 Msa0126330:CDS
TTCCTCGAGCCTACCACTCT+GGG 0.496688 1_3:-55333098 Msa0126330:CDS
ACCTGACTTGCTTCATAAGC+TGG 0.496715 1_3:-55333537 Msa0126330:intron
AGAACATTGAGGGTGAATAC+TGG 0.497381 1_3:-55334874 Msa0126330:CDS
CGGCGGTGATAAAGCATATG+AGG 0.497390 1_3:+55330571 None:intergenic
CTTTGCATGAGGTCATTGAT+GGG 0.497772 1_3:-55336399 Msa0126330:CDS
AGGAGAAGATGCACAAGAAT+GGG 0.499164 1_3:-55335100 Msa0126330:CDS
CCAAATCAGGTTTGATTAAG+GGG 0.500644 1_3:-55340545 Msa0126330:CDS
AATCGATCACCTAGGGTGGT+TGG 0.501638 1_3:+55327629 None:intergenic
GGAATTTAAATAACTTTGCA+AGG 0.501860 1_3:-55334607 Msa0126330:CDS
GATGGGCAAAATTAGACCTT+GGG 0.502818 1_3:-55330898 Msa0126330:CDS
ATGGCGGAGGCGCCTGTGAG+AGG 0.503165 1_3:-55344678 Msa0126330:CDS
TCTCATGATAAGCTATTGCT+TGG 0.503200 1_3:-55332961 Msa0126330:CDS
ATTAAGTGCAGTTTATAGAT+GGG 0.503880 1_3:-55330915 Msa0126330:CDS
CTAAAATGGAAAGATGTTTG+TGG 0.503920 1_3:-55332871 Msa0126330:CDS
GCTATTGCTTGGGGCTGCTA+GGG 0.503959 1_3:-55332950 Msa0126330:CDS
ATATTGCTATAGAGCTGTAC+CGG 0.504818 1_3:-55333008 Msa0126330:CDS
TAATCCATCTTCTTCGTCGA+AGG 0.506262 1_3:+55336151 None:intergenic
GCATCCGCTCTTGTAGAAGC+TGG 0.507863 1_3:+55330164 None:intergenic
CAGTACTGCAACAGCTCCGG+TGG 0.508016 1_3:+55327777 None:intergenic
AGATGGGCAAAATTAGACCT+TGG 0.509421 1_3:-55330899 Msa0126330:CDS
TTTGACAGATGTTCCAATAG+TGG 0.510658 1_3:-55330762 Msa0126330:CDS
TGCTTATTGCCCTTTGCATG+AGG 0.511863 1_3:-55336410 Msa0126330:CDS
TCTATAACCTCCATTCAGGC+GGG 0.512309 1_3:+55327499 None:intergenic
TCTATCTGTGGAACAGTGAC+AGG 0.513239 1_3:+55331054 None:intergenic
ATTTCTCTGCAGTTCTTCAA+AGG 0.513564 1_3:-55331161 Msa0126330:CDS
ACCAGTGTAAATGGTGGAGG+TGG 0.513681 1_3:-55327835 Msa0126330:CDS
GATCCCTTCGACGAAGAAGA+TGG 0.514849 1_3:-55336155 Msa0126330:CDS
GGTGAAAGTACCATAAATAG+AGG 0.514863 1_3:+55329660 None:intergenic
GATTCCATATGGTTCAGCTC+TGG 0.515067 1_3:+55335288 None:intergenic
AGTGACAGGCAGCAGCAGAT+AGG 0.515405 1_3:+55331068 None:intergenic
ATATGAATGAAAACCTCCCT+TGG 0.515694 1_3:+55328994 None:intergenic
CTCTATAACCTCCATTCAGG+CGG 0.517340 1_3:+55327498 None:intergenic
TCATAAGAGAGCAGAGATCC+TGG 0.517816 1_3:+55334581 None:intergenic
CTTCAGTACTGCAACAGCTC+CGG 0.518315 1_3:+55327774 None:intergenic
GTCACAGAAGCATCTGTCAC+AGG 0.518594 1_3:+55330359 None:intergenic
TGAGATGGAGCGGGTAAGAA+GGG 0.519970 1_3:-55331185 Msa0126330:CDS
TTGAGATGGAGCGGGTAAGA+AGG 0.520449 1_3:-55331186 Msa0126330:CDS
CATCAATGACCTCATGCAAA+GGG 0.522361 1_3:+55336401 None:intergenic
ACCTGGCCCAGAATTTACCT+TGG 0.522610 1_3:-55335011 Msa0126330:CDS
ATGGGAGTGGATAATGGCAC+TGG 0.522790 1_3:-55335082 Msa0126330:CDS
CGAACTAAATATTCTTGTTG+AGG 0.522912 1_3:-55330951 Msa0126330:CDS
AGGCTGCCAGCAGGATGTAA+AGG 0.525653 1_3:+55328883 None:intergenic
GAAATTCTTGATGCTGGACG+TGG 0.526135 1_3:-55329687 Msa0126330:CDS
AAAGTTTCAAAGCGTCACTT+TGG 0.528451 1_3:-55327377 Msa0126330:three_prime_UTR
CCTTCTATTCTTAAGTCCAA+AGG 0.529594 1_3:-55333171 Msa0126330:CDS
GGATTCAAAATAATATGAAA+AGG 0.530544 1_3:-55335126 Msa0126330:CDS
TCAGCAAAGTAATCTCCCAC+TGG 0.533185 1_3:+55332914 None:intergenic
AAGTCTTACGCCCCTGCTCC+CGG 0.533537 1_3:+55332989 None:intergenic
CTCCATACCTACGCGTGAGA+TGG 0.533772 1_3:-55330684 Msa0126330:CDS
CCCTCAATGTTCTCCACAGA+AGG 0.534758 1_3:+55334884 None:intergenic
GTGGAGGTGGAAGTGATCAA+GGG 0.537026 1_3:-55327822 Msa0126330:CDS
ATTCTTGTTGAGGCATTGGA+AGG 0.540387 1_3:-55330941 Msa0126330:CDS
GGCAAAATTAGACCTTGGGC+TGG 0.540388 1_3:-55330894 Msa0126330:CDS
TCGAGACCTTGTCTTCCTAA+AGG 0.541010 1_3:-55335941 Msa0126330:CDS
TCAAAACCCGGTGGAACTGA+CGG 0.542029 1_3:+55336333 None:intergenic
CCTTCTGTGGAGAACATTGA+GGG 0.542353 1_3:-55334884 Msa0126330:CDS
TATAGGTGTGTCCAAAACCC+TGG 0.542698 1_3:-55333138 Msa0126330:CDS
ATTCTGAAAGGCAAGGCTAC+CGG 0.543318 1_3:-55327342 Msa0126330:three_prime_UTR
AAAATTGCTGTATTAGCACT+TGG 0.543740 1_3:+55334923 None:intergenic
GTGGGTGTGTGCTGATTCAT+GGG 0.544169 1_3:+55327796 None:intergenic
GTGACCTCAATTTCTTCAGT+AGG 0.545384 1_3:+55334836 None:intergenic
GAATCACAGTCAACTCAGGT+TGG 0.545907 1_3:-55336216 Msa0126330:CDS
ATGCCATCAAGGCTGCCAGC+AGG 0.547470 1_3:+55328874 None:intergenic
TCCAAATAATCGATCACCTA+GGG 0.547893 1_3:+55327622 None:intergenic
ATAGGTGTGTCCAAAACCCT+GGG 0.549131 1_3:-55333137 Msa0126330:CDS
ATAGAGCTGTACCGGGAGCA+GGG 0.549215 1_3:-55333000 Msa0126330:CDS
ATCAGGTTTGATTAAGGGGA+GGG 0.549312 1_3:-55340541 Msa0126330:intron
TTCAGGTAACTGCTTTCTCA+TGG 0.551566 1_3:+55333574 None:intergenic
TGTCCTTACCCAACAAAATG+AGG 0.552174 1_3:+55334502 None:intergenic
GTAGTGCCATGGTTGTATAT+AGG 0.552380 1_3:-55334536 Msa0126330:CDS
CCAAAATGAATAATAATGGC+CGG 0.552514 1_3:+55327323 None:intergenic
GGAAGCAGTACGAGCCCAGT+GGG 0.554824 1_3:-55332929 Msa0126330:CDS
CCAAACAATTCCCGTCAGAA+AGG 0.556450 1_3:-55329978 Msa0126330:CDS
CCCGTTGACTGGCTTCCACA+TGG 0.556697 1_3:-55333033 Msa0126330:CDS
AGCAAATTCTGCAAATAGCA+AGG 0.558046 1_3:-55330735 Msa0126330:CDS
TCACAAAACCCAACCACCCT+AGG 0.559107 1_3:-55327638 Msa0126330:exon
TGTGACAGATGCTTCTGTGA+CGG 0.559586 1_3:-55330357 Msa0126330:CDS
TATAACCTCCATTCAGGCGG+GGG 0.560107 1_3:+55327501 None:intergenic
TCATTGAATTATATGCATCT+GGG 0.560710 1_3:-55333653 Msa0126330:CDS
AATGTTAGAATAAAGTCCCC+AGG 0.560998 1_3:+55333120 None:intergenic
TAACTAATTAAATCCAACAT+AGG 0.561731 1_3:+55327232 None:intergenic
AGATGCATGCAAATTGGAAG+AGG 0.562156 1_3:-55333597 Msa0126330:CDS
TATGTCAGCAACAAAATGCT+GGG 0.562554 1_3:-55328974 Msa0126330:CDS
AAGATGCACAAGAATGGGAG+TGG 0.562719 1_3:-55335095 Msa0126330:CDS
AATTCACAAACAGGGACACT+CGG 0.563265 1_3:+55330608 None:intergenic
GAAACTTGACTAGACTTGCT+AGG 0.565216 1_3:+55334662 None:intergenic
TGTTTGTGAATTCAATCAAG+AGG 0.565218 1_3:-55330597 Msa0126330:CDS
CTATAACCTCCATTCAGGCG+GGG 0.566019 1_3:+55327500 None:intergenic
ATATCTCTTAAATGTTTCCA+AGG 0.567445 1_3:+55334994 None:intergenic
TACATCTTTCGCACTGAAGA+GGG 0.567635 1_3:-55336304 Msa0126330:CDS
CAACATTGCAGTTGATGCGC+CGG 0.567962 1_3:+55329934 None:intergenic
AACACATATCCTCATAAGCT+CGG 0.567984 1_3:+55336374 None:intergenic
ATAGCAAAACAGTTTAAGCT+GGG 0.568094 1_3:-55328922 Msa0126330:CDS
AATCCATCTTCTTCGTCGAA+GGG 0.569125 1_3:+55336152 None:intergenic
CATTCAGGCTATATTTCCAA+AGG 0.569460 1_3:-55329865 Msa0126330:CDS
GAGTCCTACTGAAGAAATTG+AGG 0.569540 1_3:-55334840 Msa0126330:intron
TAATAGTGCTGGAAGGTTGG+GGG 0.571266 1_3:+55330099 None:intergenic
CCAACTTCCCTCATCAAACC+CGG 0.572060 1_3:+55340575 None:intergenic
AAACTTCAGAATCGTAACTC+AGG 0.572137 1_3:-55335163 Msa0126330:CDS
GGGAAGCAGTACGAGCCCAG+TGG 0.572739 1_3:-55332930 Msa0126330:CDS
CCATCAATGACCTCATGCAA+AGG 0.572971 1_3:+55336400 None:intergenic
CAAACATTTCGATGCCATCA+AGG 0.573152 1_3:+55328863 None:intergenic
TTTCCTTGGAAAATAATCCA+AGG 0.574213 1_3:-55329011 Msa0126330:CDS
TGTAAATTGTAGTTCATCTG+AGG 0.576556 1_3:-55327566 Msa0126330:three_prime_UTR
CAATACGAGGACCTTTCTGA+CGG 0.576853 1_3:+55329967 None:intergenic
AGATTGCCGTAATTGCCAAA+AGG 0.576897 1_3:-55335900 Msa0126330:intron
AAGAGAAACCGGGTTTGATG+AGG 0.577566 1_3:-55340583 Msa0126330:CDS
AAAGCTGCCCTTGAGGCCGA+CGG 0.577930 1_3:+55327872 None:intergenic
TGGACTCTAGGTGCCTATGT+TGG 0.578284 1_3:-55327245 Msa0126330:three_prime_UTR
TTGTGCTTTCTGGAAAGTCA+TGG 0.580340 1_3:-55329893 Msa0126330:CDS
ACGAGCAGTACATAAAATCT+GGG 0.580564 1_3:-55334631 Msa0126330:CDS
TCCATGTGGAAGCCAGTCAA+CGG 0.581948 1_3:+55333032 None:intergenic
TCCACCTCCACCATTTACAC+TGG 0.582141 1_3:+55327834 None:intergenic
CGAAGAAGATGGATTAACCA+TGG 0.582944 1_3:-55336144 Msa0126330:CDS
ACAATTGAACCCAGAGTGGT+AGG 0.583128 1_3:+55333089 None:intergenic
ATGAATCAGCACACACCCAC+CGG 0.584252 1_3:-55327793 Msa0126330:CDS
ATTCAGGCTATATTTCCAAA+GGG 0.585259 1_3:-55329864 Msa0126330:intron
ATTGTCTGCTACATTAGAAG+TGG 0.585964 1_3:+55330034 None:intergenic
TTAGCCTTAATAGTGCTGGA+AGG 0.587065 1_3:+55330092 None:intergenic
CAGGAGCAATGTGAATAATG+AGG 0.587090 1_3:-55330789 Msa0126330:CDS
ATACATCTTTCGCACTGAAG+AGG 0.587392 1_3:-55336305 Msa0126330:CDS
ATCTGAATCACAGTCAACTC+AGG 0.588426 1_3:-55336220 Msa0126330:CDS
TGCTTCTGTGACGGGTGAGA+AGG 0.589664 1_3:-55330348 Msa0126330:CDS
TCGAGTTTGTCATGAATACT+GGG 0.589756 1_3:-55327899 Msa0126330:CDS
GTCAGATTCAAATAGAAGGA+AGG 0.590620 1_3:-55330459 Msa0126330:CDS
AATTCGCTACTCGTGTTCAG+AGG 0.591578 1_3:-55335192 Msa0126330:CDS
TTCTTCACCAGAAATAGTGA+AGG 0.593991 1_3:-55328836 Msa0126330:intron
TTTGCATGAGGTCATTGATG+GGG 0.595739 1_3:-55336398 Msa0126330:CDS
ATATAGTAACATGTACTGCA+TGG 0.596328 1_3:+55329714 None:intergenic
TTCCTTGGAAAATAATCCAA+GGG 0.597322 1_3:-55329010 Msa0126330:CDS
ATGAATACTGGGACTTCCGT+CGG 0.597512 1_3:-55327888 Msa0126330:CDS
GCTTGTGAAAGCTGCCCTTG+AGG 0.598677 1_3:+55327865 None:intergenic
TATCTTCTATATCACTACAC+AGG 0.598796 1_3:+55330396 None:intergenic
CTTGGAAAATAATCCAAGGG+AGG 0.599181 1_3:-55329007 Msa0126330:CDS
TATCTGGTGTTGTAGTGCCA+TGG 0.599195 1_3:-55334547 Msa0126330:CDS
CCAATTGAGTGATAGTGCAA+AGG 0.601500 1_3:-55336184 Msa0126330:CDS
CTGCCAGCAGGATGTAAAGG+AGG 0.603312 1_3:+55328886 None:intergenic
AGAGAAACCGGGTTTGATGA+GGG 0.606699 1_3:-55340582 Msa0126330:CDS
TACAACACCAGATATATCAC+TGG 0.607854 1_3:+55334556 None:intergenic
AAGAGCGAGACCTCTTCAGT+GGG 0.608555 1_3:+55335458 None:intergenic
GGCACGTGTTGAGATGGAGC+GGG 0.608670 1_3:-55331194 Msa0126330:CDS
GCGGAGGCGCCTGTGAGAGG+AGG 0.608967 1_3:-55344675 Msa0126330:CDS
TCATGAAATTCTGAAAGGCA+AGG 0.609387 1_3:-55327349 Msa0126330:three_prime_UTR
TTGTGGCTTCAACTGTGCTG+AGG 0.610989 1_3:-55333070 Msa0126330:CDS
TCATGATAAGCTATTGCTTG+GGG 0.611636 1_3:-55332959 Msa0126330:CDS
CAGCAGGATGTAAAGGAGGA+AGG 0.611904 1_3:+55328890 None:intergenic
AGAAGCATCTGTCACAGGGA+TGG 0.613181 1_3:+55330364 None:intergenic
CCTGGAAGAATGAGACGAGT+CGG 0.613416 1_3:+55330808 None:intergenic
GCCTTCTGTGGAGAACATTG+AGG 0.614923 1_3:-55334885 Msa0126330:CDS
TTGCCTCATGAAATTCTGAA+AGG 0.615001 1_3:-55327354 Msa0126330:three_prime_UTR
CAGCAAAGTAATCTCCCACT+GGG 0.615095 1_3:+55332915 None:intergenic
AGATGCACTTGTCGTCGTCG+AGG 0.617027 1_3:+55336239 None:intergenic
AACCATGGAAAGTGCGATAG+CGG 0.617465 1_3:-55336129 Msa0126330:CDS
TCACAGAAGCATCTGTCACA+GGG 0.618605 1_3:+55330360 None:intergenic
GATGTATATGACTCAAAACC+CGG 0.620565 1_3:+55336321 None:intergenic
AAAGATGTTTGTGGAAAAGA+CGG 0.621650 1_3:-55332862 Msa0126330:CDS
AATACGAGGACCTTTCTGAC+GGG 0.621688 1_3:+55329968 None:intergenic
CGATTAGCCATCTCACGCGT+AGG 0.622030 1_3:+55330677 None:intergenic
TATGAAAAGAAAGATCTACT+GGG 0.623133 1_3:+55330222 None:intergenic
TGGTACCTTAGAGCCTTCTG+TGG 0.624238 1_3:-55334897 Msa0126330:CDS
AACTTCAGAATCGTAACTCA+GGG 0.624826 1_3:-55335162 Msa0126330:CDS
CACTATTAAGGCTAAGAACG+AGG 0.625779 1_3:-55330084 Msa0126330:CDS
TAGAGCTGTACCGGGAGCAG+GGG 0.626804 1_3:-55332999 Msa0126330:CDS
CTTGATTGAATTCACAAACA+GGG 0.626972 1_3:+55330600 None:intergenic
ACTGGAACAGAACCTAATGC+AGG 0.626995 1_3:-55335064 Msa0126330:CDS
AATCAGGTTTGATTAAGGGG+AGG 0.627244 1_3:-55340542 Msa0126330:CDS
ATGGAGCTGATCTGGAAACT+GGG 0.628046 1_3:-55334703 Msa0126330:CDS
ACTCAGGGACAAAGAAGTCA+AGG 0.628732 1_3:-55335147 Msa0126330:CDS
AACCCAGAGTGGTAGGCTCG+AGG 0.628756 1_3:+55333096 None:intergenic
CAAGAGCGAGACCTCTTCAG+TGG 0.630677 1_3:+55335457 None:intergenic
GAAAGGTCCTCGTATTGCAA+AGG 0.632795 1_3:-55329961 Msa0126330:CDS
CAGACCAGTGTAAATGGTGG+AGG 0.632859 1_3:-55327838 Msa0126330:CDS
TGAGAGGAGGAAGAAAGGCG+TGG 0.635210 1_3:-55344662 Msa0126330:CDS
AGCACAACTCCAAATTCCAA+AGG 0.636931 1_3:+55329909 None:intergenic
TCATCTCCGTGTTGAGCTAG+CGG 0.637957 1_3:+55330551 None:intergenic
CGGACAACCTTTGCAATACG+AGG 0.638052 1_3:+55329954 None:intergenic
AAAGTGCGATAGCGGTTCAG+AGG 0.639762 1_3:-55336121 Msa0126330:CDS
CACATTCCTATATACAACCA+TGG 0.639807 1_3:+55334530 None:intergenic
TTGCCTTTCAGAATTTCATG+AGG 0.640614 1_3:+55327351 None:intergenic
GAGAGGAGGAAGAAAGGCGT+GGG 0.640655 1_3:-55344661 Msa0126330:intron
TTTAGGAAGACAAGGTCTCG+AGG 0.642351 1_3:+55335943 None:intergenic
CAAGCAAGCATATCTATCTG+TGG 0.642693 1_3:+55331042 None:intergenic
GTCCAAATAATCGATCACCT+AGG 0.648766 1_3:+55327621 None:intergenic
GGCCAGACCAGTGTAAATGG+TGG 0.649543 1_3:-55327841 Msa0126330:CDS
AGGAAGACGCTGATTGTGAG+CGG 0.649584 1_3:-55336101 Msa0126330:CDS
ATGTTAGAATAAAGTCCCCA+GGG 0.650078 1_3:+55333121 None:intergenic
GGGTGAGAAGGATGCTATTG+CGG 0.650154 1_3:-55330336 Msa0126330:CDS
CATTCCAGCTTCTACAAGAG+CGG 0.652805 1_3:-55330168 Msa0126330:CDS
AGTACTGCAACAGCTCCGGT+GGG 0.653516 1_3:+55327778 None:intergenic
AGGACTCCTTTAGGAAGACA+AGG 0.655074 1_3:+55335935 None:intergenic
TATTGCTATAGAGCTGTACC+GGG 0.656325 1_3:-55333007 Msa0126330:CDS
AAGAAGTTAGGGCCAGCCCA+AGG 0.657435 1_3:+55330882 None:intergenic
TCTACAAGAGCGGATGCCAG+CGG 0.657634 1_3:-55330158 Msa0126330:CDS
AGGCACGTGTTGAGATGGAG+CGG 0.659804 1_3:-55331195 Msa0126330:CDS
AAATAATCGATCACCTAGGG+TGG 0.660486 1_3:+55327625 None:intergenic
AGATATTTATGTATCGAACA+CGG 0.665293 1_3:+55329742 None:intergenic
GTCGTCGTCGAGGAACTCGT+CGG 0.668539 1_3:+55336249 None:intergenic
AGATTCAAATAGAAGGAAGG+TGG 0.669361 1_3:-55330456 Msa0126330:CDS
CTTCCTAAAGGAGTCCTCAG+AGG 0.671328 1_3:-55335929 Msa0126330:CDS
GGCAATCTGGACATCCTCTG+AGG 0.675158 1_3:+55335915 None:intergenic
GAGCAATGTGAATAATGAGG+CGG 0.679381 1_3:-55330786 Msa0126330:CDS
AGCAGTACATAAAATCTGGG+TGG 0.681653 1_3:-55334628 Msa0126330:CDS
TGGAGGTGGAAGTGATCAAG+GGG 0.683131 1_3:-55327821 Msa0126330:CDS
ATGAAAAGAAAGATCTACTG+GGG 0.686955 1_3:+55330223 None:intergenic
TCTCCGTGTTGAGCTAGCGG+CGG 0.687733 1_3:+55330554 None:intergenic
ACATTGAGGGTGAATACTGG+CGG 0.689031 1_3:-55334871 Msa0126330:CDS
TCACCGCCGCTAGCTCAACA+CGG 0.689367 1_3:-55330557 Msa0126330:CDS
AGAACGAGGATAATCATGAG+AGG 0.690743 1_3:-55330070 Msa0126330:CDS
GTTAACGGAAACATCTCTTG+TGG 0.691193 1_3:-55330002 Msa0126330:CDS
TGAGGGTGAATACTGGCGGA+TGG 0.693563 1_3:-55334867 Msa0126330:CDS
AGCCACAATTGAACCCAGAG+TGG 0.697023 1_3:+55333085 None:intergenic
ACTCTGAGATAAGAGAAACC+GGG 0.718637 1_3:-55340593 Msa0126330:CDS
TCTTACTGACAATAAGCCAG+CGG 0.719232 1_3:-55327701 Msa0126330:CDS
GTATATGACTCAAAACCCGG+TGG 0.733791 1_3:+55336324 None:intergenic
TCTATAGCAATATGTCCATG+TGG 0.743255 1_3:+55333018 None:intergenic
TTACTGGTGCAGAATCAGCG+AGG 0.757137 1_3:-55330193 Msa0126330:CDS
TAGGTGTGTCCAAAACCCTG+GGG 0.771641 1_3:-55333136 Msa0126330:CDS
AGAGCGAGACCTCTTCAGTG+GGG 0.777129 1_3:+55335459 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTAAATAATTAATAT+TGG + chr1_3:55329343-55329362 None:intergenic 0.0%
!! TAATATTATAAAAATTAATT+AGG - chr1_3:55343492-55343511 Msa0126330:intron 0.0%
!!! TTTTTTTTTAATAAACTAAG+CGG + chr1_3:55327865-55327884 None:intergenic 10.0%
!!! ATATATATATTTTTTTTGTG+TGG + chr1_3:55329073-55329092 None:intergenic 10.0%
!! TTTAAATAATTAATATTGGT+AGG + chr1_3:55329339-55329358 None:intergenic 10.0%
!! ATAAATAAATAAATTGAGTT+GGG + chr1_3:55329686-55329705 None:intergenic 10.0%
!! AATAAATAAATAAATTGAGT+TGG + chr1_3:55329687-55329706 None:intergenic 10.0%
!!! TTTTTTTACCAATATTATAA+GGG + chr1_3:55330122-55330141 None:intergenic 10.0%
!!! TTTTTTTTACCAATATTATA+AGG + chr1_3:55330123-55330142 None:intergenic 10.0%
!! ATTATTATTATTGAAAACAT+TGG + chr1_3:55330474-55330493 None:intergenic 10.0%
!!! AATGAATTTTTTTTGTTTTT+TGG + chr1_3:55332038-55332057 None:intergenic 10.0%
!!! TCTGTTATTTTTTATTTTTT+TGG - chr1_3:55334914-55334933 Msa0126330:CDS 10.0%
!! TATAATTCAATGAATATAAA+TGG + chr1_3:55338211-55338230 None:intergenic 10.0%
!! TAGAAAATAAAATTAGAAAA+AGG - chr1_3:55344413-55344432 Msa0126330:intron 10.0%
!! AGAAAATAAAATTAGAAAAA+GGG - chr1_3:55344414-55344433 Msa0126330:intron 10.0%
!! TAAATAAGCAAAAAATTAAA+GGG + chr1_3:55344454-55344473 None:intergenic 10.0%
!! TTAAATAAGCAAAAAATTAA+AGG + chr1_3:55344455-55344474 None:intergenic 10.0%
!! AATAGTTAATAAGGATAATT+TGG + chr1_3:55328527-55328546 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr1_3:55328526-55328545 Msa0126330:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr1_3:55328550-55328569 Msa0126330:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr1_3:55328653-55328672 Msa0126330:intron 15.0%
!! CATTATCTAATAATTCATTT+GGG + chr1_3:55328832-55328851 None:intergenic 15.0%
!! TCATTATCTAATAATTCATT+TGG + chr1_3:55328833-55328852 None:intergenic 15.0%
!! AAATATAACTCATATTTACA+GGG + chr1_3:55329282-55329301 None:intergenic 15.0%
!! AAAATATAACTCATATTTAC+AGG + chr1_3:55329283-55329302 None:intergenic 15.0%
!! ATAAACAAAAAATATACGAA+TGG + chr1_3:55329915-55329934 None:intergenic 15.0%
!!! TATTTTTTGTTTATAACATG+AGG - chr1_3:55329921-55329940 Msa0126330:CDS 15.0%
!!! AAATTGTATTAAAGTGTTTA+AGG + chr1_3:55330202-55330221 None:intergenic 15.0%
!!! AAGATTTATGATTTTCTTTT+TGG + chr1_3:55330336-55330355 None:intergenic 15.0%
!!! TTAAAAAGACAGTTTTTTTA+GGG + chr1_3:55331060-55331079 None:intergenic 15.0%
!!! AATTTTTGAGATATATTTGA+GGG + chr1_3:55331473-55331492 None:intergenic 15.0%
!!! AAATTTTTGAGATATATTTG+AGG + chr1_3:55331474-55331493 None:intergenic 15.0%
!!! TTTTTAGGTTTTTAGAAATT+TGG + chr1_3:55332217-55332236 None:intergenic 15.0%
!! AAAACTTCTTAAAGTTTATA+AGG + chr1_3:55333153-55333172 None:intergenic 15.0%
!! ATCAATAGTAAATGTTAATA+AGG - chr1_3:55333467-55333486 Msa0126330:intron 15.0%
!!! TGGTCAAATTATTAATTTTA+GGG + chr1_3:55334376-55334395 None:intergenic 15.0%
!!! TTGGTCAAATTATTAATTTT+AGG + chr1_3:55334377-55334396 None:intergenic 15.0%
!!! TTTTTTTCTTTCTTTTGTTT+TGG + chr1_3:55334396-55334415 None:intergenic 15.0%
!! AAAAATTCACATTAATTTAG+AGG - chr1_3:55334414-55334433 Msa0126330:intron 15.0%
!!! GTAATATTATTGACTAATTA+AGG - chr1_3:55334743-55334762 Msa0126330:intron 15.0%
!!! TATTATTGTTATTATTTGCT+AGG - chr1_3:55334768-55334787 Msa0126330:intron 15.0%
!!! ATTTTTACATCTAGATTATT+AGG - chr1_3:55334839-55334858 Msa0126330:intron 15.0%
!!! ATAGTAATTTTGATGATATT+AGG - chr1_3:55335152-55335171 Msa0126330:CDS 15.0%
!!! GTACACTTTTATATTTATTA+CGG + chr1_3:55335865-55335884 None:intergenic 15.0%
!!! TTGTTTATAATTTTTTTCTC+AGG - chr1_3:55336521-55336540 Msa0126330:intron 15.0%
!! AAAATAATATGAAAAGGAAA+AGG - chr1_3:55336751-55336770 Msa0126330:intron 15.0%
!!! ATTATCATTTTTGAAGTATT+CGG + chr1_3:55336919-55336938 None:intergenic 15.0%
!! AATCTATATTCTATATAGAT+AGG + chr1_3:55337938-55337957 None:intergenic 15.0%
!!! TGTTTTTAATGGTTTAATTT+TGG - chr1_3:55338165-55338184 Msa0126330:intron 15.0%
!!! GTTTTTAATGGTTTAATTTT+GGG - chr1_3:55338166-55338185 Msa0126330:intron 15.0%
!!! ATCATGTTAACTATTTTAAT+TGG - chr1_3:55339105-55339124 Msa0126330:intron 15.0%
!!! ACTAAAATCACTTAAATTTT+GGG + chr1_3:55339516-55339535 None:intergenic 15.0%
!!! AACTAAAATCACTTAAATTT+TGG + chr1_3:55339517-55339536 None:intergenic 15.0%
!!! ATTTTATATGTACTGATTTA+TGG - chr1_3:55340154-55340173 Msa0126330:intron 15.0%
!! TTTAATAAACTAATGAAGTT+AGG + chr1_3:55340357-55340376 None:intergenic 15.0%
!!! TAACTTCATTAGTTTATTAA+AGG - chr1_3:55340356-55340375 Msa0126330:intron 15.0%
!!! TTCAAAATCAATATTGATTA+CGG - chr1_3:55340588-55340607 Msa0126330:CDS 15.0%
!!! TTAAAGTATTTACTTTTTGT+TGG - chr1_3:55342271-55342290 Msa0126330:intron 15.0%
!!! CAAGATTTTAAAACTATTTT+AGG - chr1_3:55342705-55342724 Msa0126330:intron 15.0%
!! TTTGTAAAATAACTAAATCT+TGG - chr1_3:55342824-55342843 Msa0126330:intron 15.0%
!! AAAGATATGTATTATAATTC+AGG + chr1_3:55343465-55343484 None:intergenic 15.0%
!! TTAAAAATATGTTAAACAAC+TGG + chr1_3:55343803-55343822 None:intergenic 15.0%
!! ATACATCAATAAAGTGAAAA+GGG - chr1_3:55327345-55327364 Msa0126330:three_prime_UTR 20.0%
!!! CTTTTTCAATTTTTTAGGTT+TGG + chr1_3:55327913-55327932 None:intergenic 20.0%
!!! GTTGTCTTTTTCAATTTTTT+AGG + chr1_3:55327918-55327937 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr1_3:55328536-55328555 None:intergenic 20.0%
!! TAGACATTATATGTAAGTTA+TGG + chr1_3:55328807-55328826 None:intergenic 20.0%
!!! ATCAATTATTTTTCTCGATT+TGG + chr1_3:55329168-55329187 None:intergenic 20.0%
!! AATCGAGAAAAATAATTGAT+AGG - chr1_3:55329168-55329187 Msa0126330:intron 20.0%
!!! TGAATTAATGTTTAGTCTTT+CGG - chr1_3:55329646-55329665 Msa0126330:intron 20.0%
!!! TATTAAATTTTACAGAGAGA+CGG - chr1_3:55329814-55329833 Msa0126330:intron 20.0%
!!! ACAATCTAAAATATATCCTA+CGG - chr1_3:55330042-55330061 Msa0126330:CDS 20.0%
!!! TATTTTAACTTCAATCTACA+AGG - chr1_3:55330381-55330400 Msa0126330:CDS 20.0%
!!! ACCACAAATATAATTGTTTT+AGG + chr1_3:55330551-55330570 None:intergenic 20.0%
!!! GTTAAAAAGACAGTTTTTTT+AGG + chr1_3:55331061-55331080 None:intergenic 20.0%
!!! AATTAGTTTTCCTAAATTAG+TGG + chr1_3:55331110-55331129 None:intergenic 20.0%
!! AAGAACACTTACTTATATTT+GGG - chr1_3:55331916-55331935 Msa0126330:intron 20.0%
!!! TGAAGAAATTAGACATTTTT+AGG + chr1_3:55332232-55332251 None:intergenic 20.0%
!! TAAACAAAATGATTGATGTT+TGG - chr1_3:55332689-55332708 Msa0126330:intron 20.0%
!! TAAAGAATGAGAATTGATAA+AGG - chr1_3:55332779-55332798 Msa0126330:intron 20.0%
!! AAAGAATGAGAATTGATAAA+GGG - chr1_3:55332780-55332799 Msa0126330:intron 20.0%
!! TTTCTTACATTGTACTAATA+TGG - chr1_3:55333040-55333059 Msa0126330:CDS 20.0%
!! AACTAATAATGTAACCTTAA+TGG - chr1_3:55333328-55333347 Msa0126330:intron 20.0%
!!! TTTATATGCTGATTATTGTT+CGG + chr1_3:55333440-55333459 None:intergenic 20.0%
!! CTTATTTGTATCCTATAAAT+AGG + chr1_3:55333734-55333753 None:intergenic 20.0%
!! ACAATTGTTATGAATATTAG+TGG + chr1_3:55333907-55333926 None:intergenic 20.0%
!!! TATTGTAGAGAATTGATTTT+GGG - chr1_3:55334190-55334209 Msa0126330:intron 20.0%
!!! AATTTGGTAATCTTATAGAT+TGG + chr1_3:55334550-55334569 None:intergenic 20.0%
!! ACTATAATTAAGCAAATTTG+CGG + chr1_3:55334725-55334744 None:intergenic 20.0%
!!! TTTTTTTGGATTTTTTTCAG+TGG - chr1_3:55334928-55334947 Msa0126330:CDS 20.0%
!! TGGTTGTTAAAATGTAATAA+TGG - chr1_3:55334987-55335006 Msa0126330:CDS 20.0%
!! ATATTAGGAAAGAAAAAGTA+CGG - chr1_3:55335167-55335186 Msa0126330:CDS 20.0%
!!! CTTCTATTGATTTCATTTAT+AGG - chr1_3:55335303-55335322 Msa0126330:CDS 20.0%
!!! ATTGATTTCATTTATAGGTA+CGG - chr1_3:55335308-55335327 Msa0126330:CDS 20.0%
!! TCCTTTGGTATTAATATTAT+TGG - chr1_3:55336003-55336022 Msa0126330:intron 20.0%
!!! GTTTTAATATACAACAGTAA+CGG + chr1_3:55336243-55336262 None:intergenic 20.0%
!! TGTAGAAGTAAACATATAAA+TGG + chr1_3:55336469-55336488 None:intergenic 20.0%
!! ATTTATATGTTTACTTCTAC+AGG - chr1_3:55336468-55336487 Msa0126330:intron 20.0%
!! GGATTCAAAATAATATGAAA+AGG - chr1_3:55336745-55336764 Msa0126330:intron 20.0%
!! AGATTATATTCTCCATAAAT+AGG + chr1_3:55337472-55337491 None:intergenic 20.0%
!!! AATACAAAATAGTTTGCTTA+GGG - chr1_3:55337632-55337651 Msa0126330:intron 20.0%
!!! TTATATAGCGTCTTTATTTT+AGG - chr1_3:55338128-55338147 Msa0126330:intron 20.0%
!!! TGCTTTATCTTTGTTTTTAA+TGG - chr1_3:55338154-55338173 Msa0126330:intron 20.0%
!!! TCTTTCTAAAATACATAAAC+TGG - chr1_3:55339195-55339214 Msa0126330:intron 20.0%
!!! CTTTCTAAAATACATAAACT+GGG - chr1_3:55339196-55339215 Msa0126330:intron 20.0%
!! ATTTATACTTCAATCTCAAT+AGG + chr1_3:55339233-55339252 None:intergenic 20.0%
!!! AAAAAGTTGTATTTTGTGTA+AGG - chr1_3:55339277-55339296 Msa0126330:intron 20.0%
!! AAGGTTAAATATAATTTCAG+TGG - chr1_3:55339465-55339484 Msa0126330:intron 20.0%
!!! ATTTAAGTGATTTTAGTTGA+AGG - chr1_3:55339519-55339538 Msa0126330:intron 20.0%
!! TGTTCAATTCAATTAAGAAA+AGG - chr1_3:55339623-55339642 Msa0126330:intron 20.0%
!! GTTCAATTCAATTAAGAAAA+GGG - chr1_3:55339624-55339643 Msa0126330:intron 20.0%
!! TTCAATTCAATTAAGAAAAG+GGG - chr1_3:55339625-55339644 Msa0126330:intron 20.0%
!! CAAAGATGAAAATCATAATT+GGG + chr1_3:55339772-55339791 None:intergenic 20.0%
!! AGAAGTTCAATTTATAACTT+TGG - chr1_3:55340003-55340022 Msa0126330:intron 20.0%
!! AATATATACGAACAAAGAAT+CGG + chr1_3:55340104-55340123 None:intergenic 20.0%
!! ATATAAAATAATTCTTCGAG+AGG + chr1_3:55340143-55340162 None:intergenic 20.0%
!!! ATTGAAAATTTCCTGATTTT+TGG - chr1_3:55340302-55340321 Msa0126330:intron 20.0%
!! TTCTAGTATTAAAACTTCTA+AGG - chr1_3:55340455-55340474 Msa0126330:intron 20.0%
!! TCTAGTATTAAAACTTCTAA+GGG - chr1_3:55340456-55340475 Msa0126330:intron 20.0%
!! ATTACGGAATGAAAATATAT+GGG - chr1_3:55340604-55340623 Msa0126330:CDS 20.0%
!! TAGATAAAAAAACAGTATGT+CGG - chr1_3:55341021-55341040 Msa0126330:intron 20.0%
!! CATATTAAATTAATTGATGC+AGG - chr1_3:55342097-55342116 Msa0126330:intron 20.0%
!! ATTTACATCAGAAATATGAA+AGG + chr1_3:55342311-55342330 None:intergenic 20.0%
!! TTCTTTACAAAAGAAAAAGT+AGG - chr1_3:55343293-55343312 Msa0126330:intron 20.0%
!! TCTTTACAAAAGAAAAAGTA+GGG - chr1_3:55343294-55343313 Msa0126330:intron 20.0%
!! AAAATTAATTAGGCCTAAAA+AGG - chr1_3:55343502-55343521 Msa0126330:intron 20.0%
!! AGGTTGTATATGAATAAATT+TGG + chr1_3:55343591-55343610 None:intergenic 20.0%
!!! TGTTTAACATATTTTTAACC+TGG - chr1_3:55343805-55343824 Msa0126330:intron 20.0%
!! ATAAAATTAGAAAAAGGGAA+AGG - chr1_3:55344419-55344438 Msa0126330:intron 20.0%
!! TGAACCAAAATGAATAATAA+TGG + chr1_3:55344555-55344574 None:intergenic 20.0%
!!! CATTTTAGATTTTTTTTTGC+TGG - chr1_3:55344606-55344625 Msa0126330:intron 20.0%
!! TAACTAATTAAATCCAACAT+AGG + chr1_3:55344642-55344661 None:intergenic 20.0%
! TGTGGCAAATATAAAACTAA+GGG + chr1_3:55327321-55327340 None:intergenic 25.0%
! ATGTGGCAAATATAAAACTA+AGG + chr1_3:55327322-55327341 None:intergenic 25.0%
! CATACATCAATAAAGTGAAA+AGG - chr1_3:55327344-55327363 Msa0126330:three_prime_UTR 25.0%
! ATAAAGTGAAAAGGGATAAA+TGG - chr1_3:55327353-55327372 Msa0126330:three_prime_UTR 25.0%
!!! ATAAATGGAGTGTTGTTAAA+TGG - chr1_3:55327368-55327387 Msa0126330:three_prime_UTR 25.0%
! ACAATTTGTCCAATTGTTTA+CGG + chr1_3:55327410-55327429 None:intergenic 25.0%
!! AAATCCCTTATGTTGTTTAT+AGG - chr1_3:55327711-55327730 Msa0126330:CDS 25.0%
! ACAACCTATAAACAACATAA+GGG + chr1_3:55327718-55327737 None:intergenic 25.0%
!! AATGTTTGTTCTTGTTTCTT+TGG - chr1_3:55327744-55327763 Msa0126330:CDS 25.0%
! GAGTTAATTACAATACAGTA+AGG + chr1_3:55327780-55327799 None:intergenic 25.0%
!! TAGTACCAAGAAATTTTCTT+TGG - chr1_3:55328068-55328087 Msa0126330:intron 25.0%
!!! TAGAACAACAACTTTTTCAT+AGG - chr1_3:55328311-55328330 Msa0126330:intron 25.0%
! ATGTAAGTTATGGTTCATAA+TGG + chr1_3:55328797-55328816 None:intergenic 25.0%
! TTGAATTGGAAACATGAATT+GGG - chr1_3:55329531-55329550 Msa0126330:intron 25.0%
!! GAATTAATGTTTAGTCTTTC+GGG - chr1_3:55329647-55329666 Msa0126330:intron 25.0%
! AAGAAGAAAACCTTAATGTT+AGG - chr1_3:55329839-55329858 Msa0126330:intron 25.0%
! AGAAGAAAACCTTAATGTTA+GGG - chr1_3:55329840-55329859 Msa0126330:intron 25.0%
!!! ATTTTGATACCCTAACATTA+AGG + chr1_3:55329852-55329871 None:intergenic 25.0%
!! AAGCTTTTCCCTTATAATAT+TGG - chr1_3:55330111-55330130 Msa0126330:CDS 25.0%
!!! TTTTGGAAGTACAAATTTCT+TGG + chr1_3:55330319-55330338 None:intergenic 25.0%
! GATTTGTGTTTATTGGAATT+TGG + chr1_3:55330414-55330433 None:intergenic 25.0%
!! TGATTTGGATTTGTGTTTAT+TGG + chr1_3:55330421-55330440 None:intergenic 25.0%
! AACACAAATCCAAATCATTT+AGG - chr1_3:55330424-55330443 Msa0126330:CDS 25.0%
! GCCTAAAACAATTATATTTG+TGG - chr1_3:55330547-55330566 Msa0126330:CDS 25.0%
!!! ACTTGTTACTCGATAATTTT+TGG - chr1_3:55331010-55331029 Msa0126330:CDS 25.0%
! ATGCAATTTACCACTAATTT+AGG - chr1_3:55331097-55331116 Msa0126330:CDS 25.0%
! ATTGGCATTTGTGAATTTAT+TGG + chr1_3:55331781-55331800 None:intergenic 25.0%
!! TATCTGATTCATTTGATGAT+TGG + chr1_3:55331799-55331818 None:intergenic 25.0%
! CAAGAACACTTACTTATATT+TGG - chr1_3:55331915-55331934 Msa0126330:intron 25.0%
! TGATGGAATTAGTTAGAATA+TGG + chr1_3:55332007-55332026 None:intergenic 25.0%
! TTTGGTGGAATTTGAAAAAA+TGG - chr1_3:55332347-55332366 Msa0126330:intron 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr1_3:55332645-55332664 Msa0126330:intron 25.0%
! ACTAAAATAGACATAGCTAA+AGG - chr1_3:55332748-55332767 Msa0126330:intron 25.0%
!!! CAAATGATATTTGGTTTTAG+TGG + chr1_3:55333083-55333102 None:intergenic 25.0%
!!! CAATTTAGCTTTTCAATTGT+TGG + chr1_3:55333230-55333249 None:intergenic 25.0%
!!! CTTAAAGTTTTATAACGTAG+TGG + chr1_3:55333279-55333298 None:intergenic 25.0%
! TAATAATGTAACCTTAATGG+TGG - chr1_3:55333331-55333350 Msa0126330:intron 25.0%
! CCAACTAAGATTCAAAATTT+CGG + chr1_3:55333560-55333579 None:intergenic 25.0%
! AAAACATGAGTCCTATTTAT+AGG - chr1_3:55333720-55333739 Msa0126330:intron 25.0%
!!! GTATTGTAGAGAATTGATTT+TGG - chr1_3:55334189-55334208 Msa0126330:intron 25.0%
! TTATACAAACCCTAATAACA+AGG + chr1_3:55334492-55334511 None:intergenic 25.0%
! TCAAATAAGCAAGGATAATT+TGG + chr1_3:55334566-55334585 None:intergenic 25.0%
! GATATCTAAACAAAATCTGA+AGG + chr1_3:55334652-55334671 None:intergenic 25.0%
! TTGTTTAGATATCTCATCTT+AGG - chr1_3:55334659-55334678 Msa0126330:CDS 25.0%
! TGTTTAGATATCTCATCTTA+GGG - chr1_3:55334660-55334679 Msa0126330:CDS 25.0%
!!! TGGATTTTCGTTTTTTTGTT+CGG - chr1_3:55334685-55334704 Msa0126330:CDS 25.0%
!! TGTTATTATTTGCTAGGTTT+AGG - chr1_3:55334774-55334793 Msa0126330:intron 25.0%
! AAATAACAGATCCATTACAA+AGG + chr1_3:55334904-55334923 None:intergenic 25.0%
!! AGTTACTTCTTTATTTGTAC+AGG - chr1_3:55335417-55335436 Msa0126330:intron 25.0%
!! GTTACTTCTTTATTTGTACA+GGG - chr1_3:55335418-55335437 Msa0126330:intron 25.0%
! GCCAATAATATTAATACCAA+AGG + chr1_3:55336007-55336026 None:intergenic 25.0%
!! TCTTCCTTTGTCATTATTTT+CGG - chr1_3:55336069-55336088 Msa0126330:intron 25.0%
!!! CATTTCCAAGTTTTATGAAT+CGG - chr1_3:55336211-55336230 Msa0126330:CDS 25.0%
!!! ATTTCCAAGTTTTATGAATC+GGG - chr1_3:55336212-55336231 Msa0126330:CDS 25.0%
!!! ACCTTAAGAGCTTATTTTAT+TGG - chr1_3:55336278-55336297 Msa0126330:CDS 25.0%
!!! CCTTAAGAGCTTATTTTATT+GGG - chr1_3:55336279-55336298 Msa0126330:CDS 25.0%
!! TCTCAAGGAAAAAAGTATAT+GGG - chr1_3:55336647-55336666 Msa0126330:intron 25.0%
!! TTTTGTGAAGTTGAAACATT+TGG - chr1_3:55336831-55336850 Msa0126330:intron 25.0%
! TTTGTGAAGTTGAAACATTT+GGG - chr1_3:55336832-55336851 Msa0126330:intron 25.0%
! ATATCTCTTAAATGTTTCCA+AGG + chr1_3:55336880-55336899 None:intergenic 25.0%
!! GCTAATACAGCAATTTTAAA+TGG - chr1_3:55336954-55336973 Msa0126330:intron 25.0%
! TATGTCCAAAACAAAATGTA+AGG + chr1_3:55337134-55337153 None:intergenic 25.0%
! GGAATTTAAATAACTTTGCA+AGG - chr1_3:55337264-55337283 Msa0126330:intron 25.0%
! TGGAAAATATCTCCTATTTA+TGG - chr1_3:55337457-55337476 Msa0126330:intron 25.0%
!!! CAATACAAAATAGTTTGCTT+AGG - chr1_3:55337631-55337650 Msa0126330:intron 25.0%
! TAATGGAAAGAACAAAACTA+AGG + chr1_3:55337726-55337745 None:intergenic 25.0%
! TGTAATTCTTATTCTTGAGA+TGG + chr1_3:55337819-55337838 None:intergenic 25.0%
! AGTATAGACAACAAATACAA+AGG + chr1_3:55337870-55337889 None:intergenic 25.0%
!!! ATTTGTTGTCTATACTCTAT+AGG - chr1_3:55337874-55337893 Msa0126330:intron 25.0%
! CAAGTTTACTTAGAAAAACA+GGG + chr1_3:55338061-55338080 None:intergenic 25.0%
! TCAAGTTTACTTAGAAAAAC+AGG + chr1_3:55338062-55338081 None:intergenic 25.0%
! TTCATTGAATTATATGCATC+TGG - chr1_3:55338217-55338236 Msa0126330:intron 25.0%
! TCATTGAATTATATGCATCT+GGG - chr1_3:55338218-55338237 Msa0126330:intron 25.0%
!!! CACTTAAATTTTGGGAAAAT+TGG + chr1_3:55339508-55339527 None:intergenic 25.0%
! TCAATTCAATTAAGAAAAGG+GGG - chr1_3:55339626-55339645 Msa0126330:intron 25.0%
! CCAAAGATGAAAATCATAAT+TGG + chr1_3:55339773-55339792 None:intergenic 25.0%
!! CCAATTATGATTTTCATCTT+TGG - chr1_3:55339770-55339789 Msa0126330:intron 25.0%
!!! AATTTCCTGATTTTTGGAAA+AGG - chr1_3:55340308-55340327 Msa0126330:intron 25.0%
!!! GGATCATTTATTTTACTTGA+TGG - chr1_3:55340329-55340348 Msa0126330:intron 25.0%
!! TTCTATTTGCTTTGAATTTG+TGG - chr1_3:55340426-55340445 Msa0126330:intron 25.0%
! CTAGTATTAAAACTTCTAAG+GGG - chr1_3:55340457-55340476 Msa0126330:intron 25.0%
! GATTACGGAATGAAAATATA+TGG - chr1_3:55340603-55340622 Msa0126330:CDS 25.0%
!!! TTTTTTTGTCTTTTTTCCCT+AGG - chr1_3:55340656-55340675 Msa0126330:intron 25.0%
!!! TTCTTCAAAGGCATTAAAAA+TGG - chr1_3:55340722-55340741 Msa0126330:intron 25.0%
! ATAACGAAAGAGGAAAAATT+TGG + chr1_3:55340892-55340911 None:intergenic 25.0%
! AATTAAGTGCAGTTTATAGA+TGG - chr1_3:55340955-55340974 Msa0126330:intron 25.0%
! ATTAAGTGCAGTTTATAGAT+GGG - chr1_3:55340956-55340975 Msa0126330:intron 25.0%
! TACTGAGATATAAGAAGTTA+GGG + chr1_3:55341003-55341022 None:intergenic 25.0%
! AGATAAAAAAACAGTATGTC+GGG - chr1_3:55341022-55341041 Msa0126330:intron 25.0%
!! CTAAGAAGTATGATATCTTT+AGG + chr1_3:55341365-55341384 None:intergenic 25.0%
! TATGAAAAGAAAGATCTACT+GGG + chr1_3:55341652-55341671 None:intergenic 25.0%
! ATATGAAAAGAAAGATCTAC+TGG + chr1_3:55341653-55341672 None:intergenic 25.0%
!! GTAGATCTTTCTTTTCATAT+AGG - chr1_3:55341653-55341672 Msa0126330:intron 25.0%
! TCATAGTTTAAAAAGTTTGG+AGG - chr1_3:55341736-55341755 Msa0126330:intron 25.0%
! AGATATTTATGTATCGAACA+CGG + chr1_3:55342132-55342151 None:intergenic 25.0%
!! AAAACATTGCTTTAAACACA+CGG + chr1_3:55342457-55342476 None:intergenic 25.0%
! TCTATAACATTAACGTCATA+GGG + chr1_3:55342496-55342515 None:intergenic 25.0%
! ATCTTAAAAATTTAGTCGTG+AGG - chr1_3:55342586-55342605 Msa0126330:intron 25.0%
!! AGTCACATGTTTAACTTATT+GGG - chr1_3:55342656-55342675 Msa0126330:intron 25.0%
! CTGTTAGTTGAAAATTACTT+TGG - chr1_3:55342739-55342758 Msa0126330:intron 25.0%
! AAAATTACCTTCACTATTTC+TGG + chr1_3:55343045-55343064 None:intergenic 25.0%
! CTTTACAAAAGAAAAAGTAG+GGG - chr1_3:55343295-55343314 Msa0126330:intron 25.0%
!! AAAAAATCAAGAGCCTTTTT+AGG + chr1_3:55343518-55343537 None:intergenic 25.0%
!!! CTAAAACGAATTTTAAGTTG+AGG + chr1_3:55343567-55343586 None:intergenic 25.0%
!! CTCAACTTAAAATTCGTTTT+AGG - chr1_3:55343565-55343584 Msa0126330:intron 25.0%
!!! TTCATGTGATTTTTTCATGA+AGG + chr1_3:55343675-55343694 None:intergenic 25.0%
!!! TTAATTTTGTTTATTCAGCC+TGG - chr1_3:55343751-55343770 Msa0126330:intron 25.0%
!!! TATTTTTAACCTGGTGTTTT+AGG - chr1_3:55343814-55343833 Msa0126330:intron 25.0%
!! ATTTTTAACCTGGTGTTTTA+GGG - chr1_3:55343815-55343834 Msa0126330:intron 25.0%
! ACTATGTTCAAGAAAAGAAT+GGG + chr1_3:55343886-55343905 None:intergenic 25.0%
! AACTATGTTCAAGAAAAGAA+TGG + chr1_3:55343887-55343906 None:intergenic 25.0%
!! CATAGAGAATTTTTGCAATT+GGG + chr1_3:55344206-55344225 None:intergenic 25.0%
!! TCATAGAGAATTTTTGCAAT+TGG + chr1_3:55344207-55344226 None:intergenic 25.0%
! TTACATGTCAAGAAAAAGTT+AGG + chr1_3:55344290-55344309 None:intergenic 25.0%
!! TTATTTAAAGTGACAGTGTT+TGG - chr1_3:55344467-55344486 Msa0126330:intron 25.0%
!!! GTTCACATTTTGAAACAATT+AGG - chr1_3:55344581-55344600 Msa0126330:intron 25.0%
CAAATATAAAACTAAGGGCT+GGG + chr1_3:55327316-55327335 None:intergenic 30.0%
CTTTATTGATGTATGACATG+TGG + chr1_3:55327339-55327358 None:intergenic 30.0%
ACATGTTGAAATTGTATGCA+TGG + chr1_3:55327448-55327467 None:intergenic 30.0%
TATGTGCAAGTAATACATGT+TGG + chr1_3:55327508-55327527 None:intergenic 30.0%
! CACTTTGATTGACTTTGATA+TGG + chr1_3:55327568-55327587 None:intergenic 30.0%
CATATCAAAGTCAATCAAAG+TGG - chr1_3:55327566-55327585 Msa0126330:three_prime_UTR 30.0%
AGTGTGAACATTGGAAAAAA+AGG + chr1_3:55327598-55327617 None:intergenic 30.0%
CACAACCTATAAACAACATA+AGG + chr1_3:55327719-55327738 None:intergenic 30.0%
AAAAGAGAGCTACAATCATA+AGG - chr1_3:55327938-55327957 Msa0126330:intron 30.0%
AAAGAGAGCTACAATCATAA+GGG - chr1_3:55327939-55327958 Msa0126330:intron 30.0%
ATGTTTCATGTCAAATAGCT+CGG + chr1_3:55327995-55328014 None:intergenic 30.0%
GACATGAAACATAAGAGAAT+AGG - chr1_3:55328003-55328022 Msa0126330:intron 30.0%
TGTGACCAAAGAAAATTTCT+TGG + chr1_3:55328076-55328095 None:intergenic 30.0%
TGTTTATTTGTGAAGAGAGA+AGG - chr1_3:55328147-55328166 Msa0126330:intron 30.0%
! GAAAAAGTTGTTGTTCTAGA+AGG + chr1_3:55328309-55328328 None:intergenic 30.0%
! AGTAAGATTTTGTATCTCCT+GGG + chr1_3:55328417-55328436 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_3:55328444-55328463 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr1_3:55328445-55328464 Msa0126330:intron 30.0%
GTACTTATTTGCAAAGTCAT+CGG - chr1_3:55328744-55328763 Msa0126330:intron 30.0%
TACTTATTTGCAAAGTCATC+GGG - chr1_3:55328745-55328764 Msa0126330:intron 30.0%
TCTCTACAAAATCTAAGTGT+TGG - chr1_3:55328942-55328961 Msa0126330:CDS 30.0%
!! ACAAAATCTAAGTGTTGGTT+TGG - chr1_3:55328947-55328966 Msa0126330:CDS 30.0%
TTGGTACATTGGAAAAAGAA+AGG - chr1_3:55328966-55328985 Msa0126330:CDS 30.0%
TGGTACATTGGAAAAAGAAA+GGG - chr1_3:55328967-55328986 Msa0126330:CDS 30.0%
AAGAATGTGCTTATCTGATT+TGG - chr1_3:55329009-55329028 Msa0126330:CDS 30.0%
TGATAGGAGAAATTAGAAAG+TGG - chr1_3:55329184-55329203 Msa0126330:intron 30.0%
ATTGGTAGGTCATATTTGAA+AGG + chr1_3:55329325-55329344 None:intergenic 30.0%
TGAACCGACAAATATACTTA+TGG - chr1_3:55329459-55329478 Msa0126330:intron 30.0%
GAAGCCATAAGTATATTTGT+CGG + chr1_3:55329466-55329485 None:intergenic 30.0%
CTTGAATTGGAAACATGAAT+TGG - chr1_3:55329530-55329549 Msa0126330:intron 30.0%
TTGGTTATTGTTTCAGGAAT+TGG - chr1_3:55329566-55329585 Msa0126330:intron 30.0%
CAAAAAATATACGAATGGTG+TGG + chr1_3:55329910-55329929 None:intergenic 30.0%
TATGTAGTACGAAAAACCTA+CGG - chr1_3:55329949-55329968 Msa0126330:CDS 30.0%
ATTATAAGGGAAAAGCTTCT+TGG + chr1_3:55330109-55330128 None:intergenic 30.0%
ATTTCTAATGTCGAGTTTGA+AGG + chr1_3:55330227-55330246 None:intergenic 30.0%
TTGTGTTTATTGGAATTTGG+TGG + chr1_3:55330411-55330430 None:intergenic 30.0%
AAGCTCAAAATAAGTCCAAA+TGG + chr1_3:55330618-55330637 None:intergenic 30.0%
CAAAATAAGCCTAATCCAAA+GGG - chr1_3:55330844-55330863 Msa0126330:CDS 30.0%
AAAATAAGCCTAATCCAAAG+GGG - chr1_3:55330845-55330864 Msa0126330:CDS 30.0%
AATCCGTTATGATACCATTA+AGG + chr1_3:55330871-55330890 None:intergenic 30.0%
! ACGCTTATGTTTCACATTTT+AGG - chr1_3:55331234-55331253 Msa0126330:intron 30.0%
! CGCTTATGTTTCACATTTTA+GGG - chr1_3:55331235-55331254 Msa0126330:intron 30.0%
!!! GTTTCACATTTTAGGGTTTT+AGG - chr1_3:55331242-55331261 Msa0126330:intron 30.0%
!! TGTTCTTGTTGTTGAATTGT+TGG + chr1_3:55331903-55331922 None:intergenic 30.0%
!!! GTTTTTTGGATTGCTAATGA+TGG + chr1_3:55332024-55332043 None:intergenic 30.0%
! TAGACATTTTACCAAACACA+TGG - chr1_3:55332058-55332077 Msa0126330:intron 30.0%
! ATGTTGTTTAGAGTACAATG+TGG + chr1_3:55332136-55332155 None:intergenic 30.0%
! TGGTGTGAAAAATCGTATTT+TGG - chr1_3:55332367-55332386 Msa0126330:intron 30.0%
ATATTCAAAGCTGAACCAAA+CGG + chr1_3:55332571-55332590 None:intergenic 30.0%
!!! TGATATTTGGTTTTAGTGGA+TGG + chr1_3:55333079-55333098 None:intergenic 30.0%
TGCTCTCATCAAATGATATT+TGG + chr1_3:55333092-55333111 None:intergenic 30.0%
GGATTACATCTATGATCTAA+TGG + chr1_3:55333209-55333228 None:intergenic 30.0%
CAATTATGTGTGGTATGATT+CGG - chr1_3:55333401-55333420 Msa0126330:intron 30.0%
! CCGAAATTTTGAATCTTAGT+TGG - chr1_3:55333557-55333576 Msa0126330:CDS 30.0%
TAGTAGAGAGAAAGAGATAA+AGG - chr1_3:55333649-55333668 Msa0126330:CDS 30.0%
AGTAGAGAGAAAGAGATAAA+GGG - chr1_3:55333650-55333669 Msa0126330:CDS 30.0%
AATTCATTCATTCCACTAGT+GGG - chr1_3:55333790-55333809 Msa0126330:intron 30.0%
AAAAATTGTGTGACATGCTA+CGG - chr1_3:55333946-55333965 Msa0126330:intron 30.0%
!! ATTTTGGTAATCTCAATGCA+AGG - chr1_3:55333974-55333993 Msa0126330:intron 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG - chr1_3:55334167-55334186 Msa0126330:intron 30.0%
ATAAACTTTCCAGTTTGGTT+TGG + chr1_3:55334236-55334255 None:intergenic 30.0%
GTATCATAAACTTTCCAGTT+TGG + chr1_3:55334241-55334260 None:intergenic 30.0%
!!! GTTTTTGGGTTACTTAATCA+AGG + chr1_3:55334289-55334308 None:intergenic 30.0%
!!! ATTGAGTACAAGGGTATTTT+GGG + chr1_3:55334322-55334341 None:intergenic 30.0%
!!! TATTGAGTACAAGGGTATTT+TGG + chr1_3:55334323-55334342 None:intergenic 30.0%
CATGAAGTTATTGAGTACAA+GGG + chr1_3:55334331-55334350 None:intergenic 30.0%
! GTAATCTTATAGATTGGTTC+TGG + chr1_3:55334544-55334563 None:intergenic 30.0%
TGAATATATGAAAAACGCGT+TGG + chr1_3:55334605-55334624 None:intergenic 30.0%
CAAAGGATCTTCACAAAATT+AGG + chr1_3:55334887-55334906 None:intergenic 30.0%
TTTGTGAAGATCCTTTGTAA+TGG - chr1_3:55334890-55334909 Msa0126330:CDS 30.0%
! GAATTTTTGATCTCATGATC+TGG - chr1_3:55334967-55334986 Msa0126330:CDS 30.0%
TGGACTTAAGTTTAAAGATC+TGG - chr1_3:55335007-55335026 Msa0126330:CDS 30.0%
!!! TATGCATTTGCTTTTTGATC+TGG - chr1_3:55335062-55335081 Msa0126330:CDS 30.0%
GTCGTTGAAAATGTATTTGT+TGG - chr1_3:55335117-55335136 Msa0126330:CDS 30.0%
! ACGTGGATTCATTTAAGATT+TGG - chr1_3:55335811-55335830 Msa0126330:intron 30.0%
GTAACCGAAAATAATGACAA+AGG + chr1_3:55336076-55336095 None:intergenic 30.0%
CCCAATAAAATAAGCTCTTA+AGG + chr1_3:55336282-55336301 None:intergenic 30.0%
GTAATTGACAATCGAAGTTT+CGG - chr1_3:55336320-55336339 Msa0126330:CDS 30.0%
TAATTGACAATCGAAGTTTC+GGG - chr1_3:55336321-55336340 Msa0126330:CDS 30.0%
!!! CATATACTTTTTTCCTTGAG+AGG + chr1_3:55336648-55336667 None:intergenic 30.0%
! CTCTCAAGGAAAAAAGTATA+TGG - chr1_3:55336646-55336665 Msa0126330:intron 30.0%
! AAGGAAAAAAGTATATGGGA+GGG - chr1_3:55336651-55336670 Msa0126330:intron 30.0%
ATGTTTCCAAGGTAAATTCT+GGG + chr1_3:55336869-55336888 None:intergenic 30.0%
AATGTTTCCAAGGTAAATTC+TGG + chr1_3:55336870-55336889 None:intergenic 30.0%
AAAATTGCTGTATTAGCACT+TGG + chr1_3:55336951-55336970 None:intergenic 30.0%
CCAAAACAAAATGTAAGGAA+GGG + chr1_3:55337129-55337148 None:intergenic 30.0%
TCCAAAACAAAATGTAAGGA+AGG + chr1_3:55337130-55337149 None:intergenic 30.0%
!!! TTTGTTTTGGACATACTTCT+AGG - chr1_3:55337139-55337158 Msa0126330:intron 30.0%
TATGAAACCAGTGATATATC+TGG - chr1_3:55337308-55337327 Msa0126330:intron 30.0%
ATACAAACACAATATGCACA+TGG + chr1_3:55337913-55337932 None:intergenic 30.0%
!!! GTTTGTTTTACTTGCTAGAT+AGG - chr1_3:55338468-55338487 Msa0126330:intron 30.0%
AACTATCGATATCTTCACAT+TGG - chr1_3:55338507-55338526 Msa0126330:intron 30.0%
ACTATCGATATCTTCACATT+GGG - chr1_3:55338508-55338527 Msa0126330:intron 30.0%
AGAAATGAAATATGGAAGGT+GGG + chr1_3:55338572-55338591 None:intergenic 30.0%
AGTCAGAAATGAAATATGGA+AGG + chr1_3:55338576-55338595 None:intergenic 30.0%
TTTGCTGAAGAAAAACACTT+CGG - chr1_3:55338972-55338991 Msa0126330:intron 30.0%
ACACTTCGGATAATCTAAAA+TGG - chr1_3:55338986-55339005 Msa0126330:intron 30.0%
CTAAAATGGAAAGATGTTTG+TGG - chr1_3:55339000-55339019 Msa0126330:intron 30.0%
AAAGATGTTTGTGGAAAAGA+CGG - chr1_3:55339009-55339028 Msa0126330:intron 30.0%
CTCCATATAATACTGTAGAA+CGG - chr1_3:55339067-55339086 Msa0126330:intron 30.0%
TCCATATAATACTGTAGAAC+GGG - chr1_3:55339068-55339087 Msa0126330:intron 30.0%
ATTAGAAGATAGAAGCAGTT+GGG + chr1_3:55339257-55339276 None:intergenic 30.0%
TATTAGAAGATAGAAGCAGT+TGG + chr1_3:55339258-55339277 None:intergenic 30.0%
! TGTATTTTGTGTAAGGTAAG+TGG - chr1_3:55339284-55339303 Msa0126330:intron 30.0%
! GTATTTTGTGTAAGGTAAGT+GGG - chr1_3:55339285-55339304 Msa0126330:intron 30.0%
CCTAAAGAAATCTTGAATGA+AGG + chr1_3:55339573-55339592 None:intergenic 30.0%
CCTTCATTCAAGATTTCTTT+AGG - chr1_3:55339570-55339589 Msa0126330:intron 30.0%
TTTCAACTTCATTGGAAGTA+AGG - chr1_3:55339863-55339882 Msa0126330:intron 30.0%
TTCAACTTCATTGGAAGTAA+GGG - chr1_3:55339864-55339883 Msa0126330:intron 30.0%
CAGAAAAATGGTTAGAAGTT+TGG + chr1_3:55339902-55339921 None:intergenic 30.0%
TTGGAAGATATTCTTGAATC+AGG - chr1_3:55340022-55340041 Msa0126330:intron 30.0%
ACAGCAAATGTTAACTACAA+AGG - chr1_3:55340050-55340069 Msa0126330:intron 30.0%
TGTTAACTACAAAGGAATGA+AGG - chr1_3:55340058-55340077 Msa0126330:intron 30.0%
ACAAGTGAAAACTAATGAGT+TGG + chr1_3:55340265-55340284 None:intergenic 30.0%
! TAGTTTTCACTTGTCTTCAT+TGG - chr1_3:55340271-55340290 Msa0126330:intron 30.0%
! AGTTTTCACTTGTCTTCATT+GGG - chr1_3:55340272-55340291 Msa0126330:intron 30.0%
! ATGATCCTTTTCCAAAAATC+AGG + chr1_3:55340316-55340335 None:intergenic 30.0%
!! TGATTTTGAAAGTGAGAAGT+CGG + chr1_3:55340578-55340597 None:intergenic 30.0%
CGAACTAAATATTCTTGTTG+AGG - chr1_3:55340920-55340939 Msa0126330:intron 30.0%
AAATATTCTTGTTGAGGCAT+TGG - chr1_3:55340926-55340945 Msa0126330:intron 30.0%
CTACTGAGATATAAGAAGTT+AGG + chr1_3:55341004-55341023 None:intergenic 30.0%
!! CGTAAGATCTTTGCTATTAA+AGG - chr1_3:55341215-55341234 Msa0126330:intron 30.0%
CTTGATTGAATTCACAAACA+GGG + chr1_3:55341274-55341293 None:intergenic 30.0%
TCTTGATTGAATTCACAAAC+AGG + chr1_3:55341275-55341294 None:intergenic 30.0%
TGTTTGTGAATTCAATCAAG+AGG - chr1_3:55341274-55341293 Msa0126330:intron 30.0%
AGATGTCAGATTCAAATAGA+AGG - chr1_3:55341408-55341427 Msa0126330:intron 30.0%
TATCTTCTATATCACTACAC+AGG + chr1_3:55341478-55341497 None:intergenic 30.0%
ATGAAAAGAAAGATCTACTG+GGG + chr1_3:55341651-55341670 None:intergenic 30.0%
! TCTTTTCATATAGGTCTTAC+TGG - chr1_3:55341662-55341681 Msa0126330:intron 30.0%
CGGTCATAGTTTAAAAAGTT+TGG - chr1_3:55341733-55341752 Msa0126330:intron 30.0%
ATTCAGGCTATATTTCCAAA+GGG - chr1_3:55342007-55342026 Msa0126330:intron 30.0%
ATATAGTAACATGTACTGCA+TGG + chr1_3:55342160-55342179 None:intergenic 30.0%
ATTTCAGAAATTCTTGATGC+TGG - chr1_3:55342178-55342197 Msa0126330:intron 30.0%
AAAGATTGCAGTTAAGCATA+AGG + chr1_3:55342235-55342254 None:intergenic 30.0%
!! TGACAAGATTTTAGCACAAA+GGG + chr1_3:55342358-55342377 None:intergenic 30.0%
!! TTGACAAGATTTTAGCACAA+AGG + chr1_3:55342359-55342378 None:intergenic 30.0%
TTTGTGCTAAAATCTTGTCA+AGG - chr1_3:55342358-55342377 Msa0126330:intron 30.0%
AATTCTTGCCCACATAATAA+GGG + chr1_3:55342389-55342408 None:intergenic 30.0%
AAATTCTTGCCCACATAATA+AGG + chr1_3:55342390-55342409 None:intergenic 30.0%
AGAATTTGATGGAAGATTCT+TGG - chr1_3:55342403-55342422 Msa0126330:intron 30.0%
CTCTATAACATTAACGTCAT+AGG + chr1_3:55342497-55342516 None:intergenic 30.0%
AAGATTATATGTGCCCATAA+TGG + chr1_3:55342571-55342590 None:intergenic 30.0%
! CAGTCACATGTTTAACTTAT+TGG - chr1_3:55342655-55342674 Msa0126330:intron 30.0%
GTTGAAAATTACTTTGGACA+TGG - chr1_3:55342745-55342764 Msa0126330:intron 30.0%
! ATTATTTTCCAAGGAAACCT+GGG + chr1_3:55342857-55342876 None:intergenic 30.0%
TTTCCTTGGAAAATAATCCA+AGG - chr1_3:55342860-55342879 Msa0126330:intron 30.0%
TTCCTTGGAAAATAATCCAA+GGG - chr1_3:55342861-55342880 Msa0126330:intron 30.0%
ATAGCAAAACAGTTTAAGCT+GGG - chr1_3:55342949-55342968 Msa0126330:intron 30.0%
! ATTTTCATAATGTGCAACTC+AGG - chr1_3:55343197-55343216 Msa0126330:intron 30.0%
! TTTTCAGTAGATCACAAAAC+AGG + chr1_3:55343234-55343253 None:intergenic 30.0%
! GTTTTGTGATCTACTGAAAA+TGG - chr1_3:55343234-55343253 Msa0126330:intron 30.0%
ACTCGGATTAAAAAGAAGAA+AGG + chr1_3:55343850-55343869 None:intergenic 30.0%
CTTATCTGCTTTCTTTAATC+AGG - chr1_3:55343927-55343946 Msa0126330:intron 30.0%
TTTCTTTAATCAGGCTATTG+AGG - chr1_3:55343936-55343955 Msa0126330:intron 30.0%
CCTATTTAAAAAAGCGAATC+CGG - chr1_3:55344122-55344141 Msa0126330:intron 30.0%
TACAATGAGTTCAATTCTTC+CGG + chr1_3:55344144-55344163 None:intergenic 30.0%
TGTAAATTGTAGTTCATCTG+AGG - chr1_3:55344305-55344324 Msa0126330:intron 30.0%
GAGGTTATAGAGAAAGAAAA+AGG - chr1_3:55344384-55344403 Msa0126330:intron 30.0%
CCAAAATGAATAATAATGGC+CGG + chr1_3:55344551-55344570 None:intergenic 30.0%
!!! ATTTTTTTTTGCTGGACTCT+AGG - chr1_3:55344614-55344633 Msa0126330:intron 30.0%
GCAAATATAAAACTAAGGGC+TGG + chr1_3:55327317-55327336 None:intergenic 35.0%
GCAATATGAAGTATGAAACG+TGG + chr1_3:55327540-55327559 None:intergenic 35.0%
! ACTTGCAACTCTTCTAGAAA+GGG - chr1_3:55327615-55327634 Msa0126330:three_prime_UTR 35.0%
TGAAACATAAGAGAATAGGC+AGG - chr1_3:55328007-55328026 Msa0126330:intron 35.0%
TCTTCTCTCTCTTCTTTCTT+TGG + chr1_3:55328100-55328119 None:intergenic 35.0%
TGTGACCAAACCAAATTTCT+TGG - chr1_3:55328183-55328202 Msa0126330:intron 35.0%
TCAAACAAGAGTTTCTCCTA+CGG - chr1_3:55328213-55328232 Msa0126330:intron 35.0%
TTAAACATGGACGACTTGAT+TGG - chr1_3:55328282-55328301 Msa0126330:intron 35.0%
! AGGTCTCTACAAATACCTTT+TGG - chr1_3:55328331-55328350 Msa0126330:intron 35.0%
! GAGTAAGATTTTGTATCTCC+TGG + chr1_3:55328418-55328437 None:intergenic 35.0%
! GTAATACTTTGGAAGTAGTG+TGG - chr1_3:55328561-55328580 Msa0126330:intron 35.0%
!! GTAGTGTGGAGAGTATTAAT+TGG - chr1_3:55328575-55328594 Msa0126330:intron 35.0%
!! TGTGGAGAGTATTAATTGGA+GGG - chr1_3:55328579-55328598 Msa0126330:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr1_3:55328643-55328662 Msa0126330:intron 35.0%
GTTCATAATGGTTGTCGTTA+AGG + chr1_3:55328785-55328804 None:intergenic 35.0%
!! TAAGTGTTGGTTTGGTACAT+TGG - chr1_3:55328955-55328974 Msa0126330:CDS 35.0%
TACATTGGAAAAAGAAAGGG+TGG - chr1_3:55328970-55328989 Msa0126330:CDS 35.0%
!! TGCTTATCTGATTTGGTTGA+AGG - chr1_3:55329016-55329035 Msa0126330:intron 35.0%
!! GCTTATCTGATTTGGTTGAA+GGG - chr1_3:55329017-55329036 Msa0126330:intron 35.0%
!! CTTATCTGATTTGGTTGAAG+GGG - chr1_3:55329018-55329037 Msa0126330:intron 35.0%
CTCATATTTACAGGGACTAA+AGG + chr1_3:55329274-55329293 None:intergenic 35.0%
TGAAAGGATCAGTAAGTTCA+GGG + chr1_3:55329309-55329328 None:intergenic 35.0%
TTGAAAGGATCAGTAAGTTC+AGG + chr1_3:55329310-55329329 None:intergenic 35.0%
CATGTTGAGTCAGCAAAATT+TGG - chr1_3:55329434-55329453 Msa0126330:intron 35.0%
TTCAAGAGAAGATGAAGAGA+GGG + chr1_3:55329516-55329535 None:intergenic 35.0%
ATTCAAGAGAAGATGAAGAG+AGG + chr1_3:55329517-55329536 None:intergenic 35.0%
CTCTTCATCTTCTCTTGAAT+TGG - chr1_3:55329517-55329536 Msa0126330:intron 35.0%
GAAACATGAATTGGGAAACT+GGG - chr1_3:55329539-55329558 Msa0126330:intron 35.0%
AAACATGAATTGGGAAACTG+GGG - chr1_3:55329540-55329559 Msa0126330:intron 35.0%
! CCATAGTCTTGGTTATTGTT+TGG + chr1_3:55329604-55329623 None:intergenic 35.0%
CCAAACAATAACCAAGACTA+TGG - chr1_3:55329601-55329620 Msa0126330:intron 35.0%
ATAAGACTGAACCATAGTCT+TGG + chr1_3:55329615-55329634 None:intergenic 35.0%
AACGAATGTATATAAGCCGT+AGG + chr1_3:55330061-55330080 None:intergenic 35.0%
AATGGAGAGCAATTCTTGTA+TGG + chr1_3:55330579-55330598 None:intergenic 35.0%
CTCTCCATTTAGATACTACT+AGG - chr1_3:55330590-55330609 Msa0126330:CDS 35.0%
GCAAAATAAGCCTAATCCAA+AGG - chr1_3:55330843-55330862 Msa0126330:CDS 35.0%
! TTTTATAAGTCACGTTCACG+CGG + chr1_3:55330952-55330971 None:intergenic 35.0%
CCCTTAATCAAACCTGATTT+GGG + chr1_3:55331328-55331347 None:intergenic 35.0%
CCCAAATCAGGTTTGATTAA+GGG - chr1_3:55331325-55331344 Msa0126330:intron 35.0%
CCAAATCAGGTTTGATTAAG+GGG - chr1_3:55331326-55331345 Msa0126330:intron 35.0%
TAGTATGTTTGACTGCAATG+TGG + chr1_3:55331967-55331986 None:intergenic 35.0%
AAAATTGCACTCCATGTGTT+TGG + chr1_3:55332072-55332091 None:intergenic 35.0%
GAGTACAATGTGGTAGTTTA+TGG + chr1_3:55332126-55332145 None:intergenic 35.0%
TGTCAGTGATGAATTAAGTC+AGG + chr1_3:55332172-55332191 None:intergenic 35.0%
!!! TGGCTTGCATGTTAGTTTTT+AGG + chr1_3:55332197-55332216 None:intergenic 35.0%
!! GATGATGATTTGCTTGAGTT+TGG - chr1_3:55332329-55332348 Msa0126330:intron 35.0%
TGGTGAAGTTTGAAAGTGAA+TGG - chr1_3:55332387-55332406 Msa0126330:intron 35.0%
GGTGAAGTTTGAAAGTGAAT+GGG - chr1_3:55332388-55332407 Msa0126330:intron 35.0%
! GCATACTTGTCATTTCAGTT+GGG - chr1_3:55332500-55332519 Msa0126330:intron 35.0%
!! AATTCTTTTAAGTGCCCGTT+TGG - chr1_3:55332553-55332572 Msa0126330:intron 35.0%
TATTCAAAGCTGAACCAAAC+GGG + chr1_3:55332570-55332589 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG - chr1_3:55332842-55332861 Msa0126330:CDS 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr1_3:55332873-55332892 Msa0126330:CDS 35.0%
!! CCTTTTATGATGCTTTGTTG+AGG + chr1_3:55333116-55333135 None:intergenic 35.0%
! CCTCAACAAAGCATCATAAA+AGG - chr1_3:55333113-55333132 Msa0126330:CDS 35.0%
! TGTAACCTTAATGGTGGAAT+CGG - chr1_3:55333337-55333356 Msa0126330:intron 35.0%
CAATTCATTCATTCCACTAG+TGG - chr1_3:55333789-55333808 Msa0126330:intron 35.0%
TTCTATAGTTACCTGCTAGT+GGG + chr1_3:55333859-55333878 None:intergenic 35.0%
TAGCAGGTAACTATAGAACT+TGG - chr1_3:55333861-55333880 Msa0126330:intron 35.0%
AACTTGGAAGATCAAGAATG+TGG - chr1_3:55333877-55333896 Msa0126330:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG - chr1_3:55334151-55334170 Msa0126330:intron 35.0%
GGGTTACTTAATCAAGGTTT+GGG + chr1_3:55334283-55334302 None:intergenic 35.0%
TGGGTTACTTAATCAAGGTT+TGG + chr1_3:55334284-55334303 None:intergenic 35.0%
! TGGGGTTTTCAGATGTTTTT+GGG + chr1_3:55334303-55334322 None:intergenic 35.0%
! TTGGGGTTTTCAGATGTTTT+TGG + chr1_3:55334304-55334323 None:intergenic 35.0%
!!! TTGAGTACAAGGGTATTTTG+GGG + chr1_3:55334321-55334340 None:intergenic 35.0%
GCATGAAGTTATTGAGTACA+AGG + chr1_3:55334332-55334351 None:intergenic 35.0%
!! TCATCCTCTACCTTGTTATT+AGG - chr1_3:55334479-55334498 Msa0126330:intron 35.0%
!! CATCCTCTACCTTGTTATTA+GGG - chr1_3:55334480-55334499 Msa0126330:intron 35.0%
AAACCCTAATAACAAGGTAG+AGG + chr1_3:55334486-55334505 None:intergenic 35.0%
GTGAATCAGTCAAATAAGCA+AGG + chr1_3:55334575-55334594 None:intergenic 35.0%
AGATATCTCATCTTAGGGTA+TGG - chr1_3:55334665-55334684 Msa0126330:CDS 35.0%
CGAGCTATTTATGAAGTTAG+CGG - chr1_3:55335267-55335286 Msa0126330:CDS 35.0%
AACACATATCCTCATAAGCT+CGG + chr1_3:55335500-55335519 None:intergenic 35.0%
GATGTATATGACTCAAAACC+CGG + chr1_3:55335553-55335572 None:intergenic 35.0%
!! AAAGCACCTTTTGGCAATTA+CGG + chr1_3:55335980-55335999 None:intergenic 35.0%
ACATCCCGATTCATAAAACT+TGG + chr1_3:55336219-55336238 None:intergenic 35.0%
!!! TTTTTTCCTTGAGAGGACAA+GGG + chr1_3:55336641-55336660 None:intergenic 35.0%
! CAAGGAAAAAAGTATATGGG+AGG - chr1_3:55336650-55336669 Msa0126330:intron 35.0%
AAACTTCAGAATCGTAACTC+AGG - chr1_3:55336708-55336727 Msa0126330:intron 35.0%
AACTTCAGAATCGTAACTCA+GGG - chr1_3:55336709-55336728 Msa0126330:intron 35.0%
ACTTCACAAAATCCTGCATT+AGG + chr1_3:55336822-55336841 None:intergenic 35.0%
!! CCCTTCCTTACATTTTGTTT+TGG - chr1_3:55337126-55337145 Msa0126330:intron 35.0%
ACATACTTCTAGGTGCTTTA+TGG - chr1_3:55337149-55337168 Msa0126330:intron 35.0%
TACGAGCAGTACATAAAATC+TGG - chr1_3:55337239-55337258 Msa0126330:intron 35.0%
ACGAGCAGTACATAAAATCT+GGG - chr1_3:55337240-55337259 Msa0126330:intron 35.0%
AATAACTTTGCAAGGTTACC+AGG - chr1_3:55337272-55337291 Msa0126330:intron 35.0%
TACAACACCAGATATATCAC+TGG + chr1_3:55337318-55337337 None:intergenic 35.0%
CACATTCCTATATACAACCA+TGG + chr1_3:55337344-55337363 None:intergenic 35.0%
! TGTGCTTTTCCTCATTTTGT+TGG - chr1_3:55337360-55337379 Msa0126330:intron 35.0%
! GTGCTTTTCCTCATTTTGTT+GGG - chr1_3:55337361-55337380 Msa0126330:intron 35.0%
! TTTCCTCATTTTGTTGGGTA+AGG - chr1_3:55337366-55337385 Msa0126330:intron 35.0%
! AATAGGAGATATTTTCCAGC+AGG + chr1_3:55337455-55337474 None:intergenic 35.0%
!!! ATGTTTTTTATTTGCCGCTG+TGG - chr1_3:55337597-55337616 Msa0126330:intron 35.0%
ATATGCAATTGATTGTGCTC+CGG - chr1_3:55337774-55337793 Msa0126330:intron 35.0%
ACTTAGAAAAACAGGGCAAA+AGG + chr1_3:55338054-55338073 None:intergenic 35.0%
! ATTTGCATGCATCTTTTGCA+GGG + chr1_3:55338268-55338287 None:intergenic 35.0%
! AATTTGCATGCATCTTTTGC+AGG + chr1_3:55338269-55338288 None:intergenic 35.0%
TGCAAAAGATGCATGCAAAT+TGG - chr1_3:55338268-55338287 Msa0126330:intron 35.0%
GGTTGTTCTTCAAAAAGTTC+AGG + chr1_3:55338317-55338336 None:intergenic 35.0%
CAAACAAGACGATAAACAAG+AGG + chr1_3:55338453-55338472 None:intergenic 35.0%
GAAATGAAATATGGAAGGTG+GGG + chr1_3:55338571-55338590 None:intergenic 35.0%
CAGAAATGAAATATGGAAGG+TGG + chr1_3:55338573-55338592 None:intergenic 35.0%
GCTCAGTCAGAAATGAAATA+TGG + chr1_3:55338580-55338599 None:intergenic 35.0%
ACTTTCTAACTTTCGCTTAC+AGG - chr1_3:55338663-55338682 Msa0126330:intron 35.0%
CCTTTGGACTTAAGAATAGA+AGG + chr1_3:55338703-55338722 None:intergenic 35.0%
CCTTCTATTCTTAAGTCCAA+AGG - chr1_3:55338700-55338719 Msa0126330:intron 35.0%
! TTTTGGACACACCTATAAAC+TGG + chr1_3:55338730-55338749 None:intergenic 35.0%
ATGTTAGAATAAAGTCCCCA+GGG + chr1_3:55338753-55338772 None:intergenic 35.0%
AATGTTAGAATAAAGTCCCC+AGG + chr1_3:55338754-55338773 None:intergenic 35.0%
TCTATAGCAATATGTCCATG+TGG + chr1_3:55338856-55338875 None:intergenic 35.0%
ATATTGCTATAGAGCTGTAC+CGG - chr1_3:55338863-55338882 Msa0126330:intron 35.0%
TCTCATGATAAGCTATTGCT+TGG - chr1_3:55338910-55338929 Msa0126330:intron 35.0%
CTCATGATAAGCTATTGCTT+GGG - chr1_3:55338911-55338930 Msa0126330:intron 35.0%
TCATGATAAGCTATTGCTTG+GGG - chr1_3:55338912-55338931 Msa0126330:intron 35.0%
!!! TCTTTTGGCAAAAGCATTCA+AGG - chr1_3:55339032-55339051 Msa0126330:intron 35.0%
TCCCGTTCTACAGTATTATA+TGG + chr1_3:55339072-55339091 None:intergenic 35.0%
TTAGAAGATAGAAGCAGTTG+GGG + chr1_3:55339256-55339275 None:intergenic 35.0%
CTGTCATCACCTAACTATTT+AGG - chr1_3:55339384-55339403 Msa0126330:intron 35.0%
TCTCGAAAGCCTAAATAGTT+AGG + chr1_3:55339396-55339415 None:intergenic 35.0%
ATTTAGGCTTTCGAGATAGT+TGG - chr1_3:55339400-55339419 Msa0126330:intron 35.0%
AGCTTATTGTGCTTAAAGTG+TGG - chr1_3:55339810-55339829 Msa0126330:intron 35.0%
!! TTCTAACCATTTTTCTGTCG+AGG - chr1_3:55339905-55339924 Msa0126330:intron 35.0%
! CTGCTTGATAAGTTGAAGTT+AGG - chr1_3:55339938-55339957 Msa0126330:intron 35.0%
! CTTGATAAGTTGAAGTTAGG+TGG - chr1_3:55339941-55339960 Msa0126330:intron 35.0%
TAACTACAAAGGAATGAAGG+TGG - chr1_3:55340061-55340080 Msa0126330:intron 35.0%
! GTTTTCACTTGTCTTCATTG+GGG - chr1_3:55340273-55340292 Msa0126330:intron 35.0%
! TTTTCACTTGTCTTCATTGG+GGG - chr1_3:55340274-55340293 Msa0126330:intron 35.0%
! TCTTTTTCTTGCCAGTTTGA+GGG + chr1_3:55340550-55340569 None:intergenic 35.0%
! ATCTTTTTCTTGCCAGTTTG+AGG + chr1_3:55340551-55340570 None:intergenic 35.0%
ATTTCTCTGCAGTTCTTCAA+AGG - chr1_3:55340710-55340729 Msa0126330:intron 35.0%
! TTTTGATGCTACCAGTGAAA+GGG - chr1_3:55340752-55340771 Msa0126330:intron 35.0%
CGCTAATATCATAACGAAAG+AGG + chr1_3:55340902-55340921 None:intergenic 35.0%
TTTGACAGATGTTCCAATAG+TGG - chr1_3:55341109-55341128 Msa0126330:intron 35.0%
! GAATTTGCTTGATCCACTAT+TGG + chr1_3:55341125-55341144 None:intergenic 35.0%
AGCAAATTCTGCAAATAGCA+AGG - chr1_3:55341136-55341155 Msa0126330:intron 35.0%
GTCAGATTCAAATAGAAGGA+AGG - chr1_3:55341412-55341431 Msa0126330:intron 35.0%
AGATTCAAATAGAAGGAAGG+TGG - chr1_3:55341415-55341434 Msa0126330:intron 35.0%
! ACTTTTTAAACTATGACCGC+TGG + chr1_3:55341732-55341751 None:intergenic 35.0%
GATAATCATGAGAGGTTTGA+TGG - chr1_3:55341809-55341828 Msa0126330:intron 35.0%
ATTGTCTGCTACATTAGAAG+TGG + chr1_3:55341840-55341859 None:intergenic 35.0%
!! AATGTTGAGCCTTTGGAATT+TGG - chr1_3:55341953-55341972 Msa0126330:intron 35.0%
CATTCAGGCTATATTTCCAA+AGG - chr1_3:55342006-55342025 Msa0126330:intron 35.0%
!! GGTGAAAGTACCATAAATAG+AGG + chr1_3:55342214-55342233 None:intergenic 35.0%
AAGGTTTACCCCTTATTATG+TGG - chr1_3:55342377-55342396 Msa0126330:intron 35.0%
AGGTTTACCCCTTATTATGT+GGG - chr1_3:55342378-55342397 Msa0126330:intron 35.0%
ATTCTTGCCCACATAATAAG+GGG + chr1_3:55342388-55342407 None:intergenic 35.0%
TTATGTGGGCAAGAATTTGA+TGG - chr1_3:55342392-55342411 Msa0126330:intron 35.0%
AAAGCCATGAACTGGAAAAT+AGG + chr1_3:55342433-55342452 None:intergenic 35.0%
AATGAACAATGTCCATCTCA+GGG + chr1_3:55342542-55342561 None:intergenic 35.0%
TTGAAAAAGCAGTTGTGATC+TGG - chr1_3:55342614-55342633 Msa0126330:intron 35.0%
!! AATCTTGATTTTGATCCGAC+AGG + chr1_3:55342692-55342711 None:intergenic 35.0%
AAATTACTTTGGACATGGAG+AGG - chr1_3:55342750-55342769 Msa0126330:intron 35.0%
TTCCAGCCAATTGAATAACT+CGG + chr1_3:55342790-55342809 None:intergenic 35.0%
GTTATTCAATTGGCTGGAAT+TGG - chr1_3:55342791-55342810 Msa0126330:intron 35.0%
AATTGGCTGGAATTGGAAAT+AGG - chr1_3:55342798-55342817 Msa0126330:intron 35.0%
! GATTATTTTCCAAGGAAACC+TGG + chr1_3:55342858-55342877 None:intergenic 35.0%
ATATGAATGAAAACCTCCCT+TGG + chr1_3:55342880-55342899 None:intergenic 35.0%
ATATGTCAGCAACAAAATGC+TGG - chr1_3:55342896-55342915 Msa0126330:intron 35.0%
TATGTCAGCAACAAAATGCT+GGG - chr1_3:55342897-55342916 Msa0126330:intron 35.0%
GATAGCAAAACAGTTTAAGC+TGG - chr1_3:55342948-55342967 Msa0126330:intron 35.0%
TTCTTCACCAGAAATAGTGA+AGG - chr1_3:55343035-55343054 Msa0126330:intron 35.0%
! AAGCAACTAAAGCATTTGCT+CGG - chr1_3:55343331-55343350 Msa0126330:intron 35.0%
TGGGCATAACAAAACTAACT+CGG + chr1_3:55343867-55343886 None:intergenic 35.0%
!!! CATAGTTTTGATAGCTCTCA+AGG - chr1_3:55343900-55343919 Msa0126330:intron 35.0%
TCGAGTTTGTCATGAATACT+GGG - chr1_3:55343972-55343991 Msa0126330:intron 35.0%
!!! CCGGATTCGCTTTTTTAAAT+AGG + chr1_3:55344125-55344144 None:intergenic 35.0%
TCCAAATAATCGATCACCTA+GGG + chr1_3:55344252-55344271 None:intergenic 35.0%
AAAAACCCAAAGACTAAGGT+TGG + chr1_3:55344349-55344368 None:intergenic 35.0%
TTTCTCTATAACCTCCATTC+AGG + chr1_3:55344379-55344398 None:intergenic 35.0%
TTAAAGTGACAGTGTTTGGA+TGG - chr1_3:55344471-55344490 Msa0126330:intron 35.0%
! AAAGTTTCAAAGCGTCACTT+TGG - chr1_3:55344494-55344513 Msa0126330:intron 35.0%
TTGCCTCATGAAATTCTGAA+AGG - chr1_3:55344517-55344536 Msa0126330:intron 35.0%
TTGCCTTTCAGAATTTCATG+AGG + chr1_3:55344523-55344542 None:intergenic 35.0%
! TCATGAAATTCTGAAAGGCA+AGG - chr1_3:55344522-55344541 Msa0126330:intron 35.0%
! CCGGCCATTATTATTCATTT+TGG - chr1_3:55344548-55344567 Msa0126330:intron 35.0%
GTTGTTAAATGGAGCGAAGT+CGG - chr1_3:55327379-55327398 Msa0126330:three_prime_UTR 40.0%
AGAGTTGCAAGTGTGAACAT+TGG + chr1_3:55327607-55327626 None:intergenic 40.0%
! CACTTGCAACTCTTCTAGAA+AGG - chr1_3:55327614-55327633 Msa0126330:three_prime_UTR 40.0%
! TCGACTTTGACTATCCCTTT+TGG - chr1_3:55327683-55327702 Msa0126330:CDS 40.0%
! ACTTTGACTATCCCTTTTGG+AGG - chr1_3:55327686-55327705 Msa0126330:CDS 40.0%
! AAGGGATTTTGCCTCCAAAA+GGG + chr1_3:55327700-55327719 None:intergenic 40.0%
! TAAGGGATTTTGCCTCCAAA+AGG + chr1_3:55327701-55327720 None:intergenic 40.0%
! CAAATAGCTCGGTTTTCGAT+CGG + chr1_3:55327984-55328003 None:intergenic 40.0%
CTACGGGATGAGAAATTCTT+AGG - chr1_3:55328040-55328059 Msa0126330:intron 40.0%
CAGGACCAAGAAATTTGGTT+TGG + chr1_3:55328191-55328210 None:intergenic 40.0%
CAAACCAAATTTCTTGGTCC+TGG - chr1_3:55328189-55328208 Msa0126330:intron 40.0%
TGAACCAGGACCAAGAAATT+TGG + chr1_3:55328196-55328215 None:intergenic 40.0%
! GAGAAACTCTTGTTTGAACC+AGG + chr1_3:55328210-55328229 None:intergenic 40.0%
CAAACAAGAGTTTCTCCTAC+GGG - chr1_3:55328214-55328233 Msa0126330:intron 40.0%
TTAAAGACCCTTGCAAGGAT+TGG + chr1_3:55328266-55328285 None:intergenic 40.0%
CATGTTTAAAGACCCTTGCA+AGG + chr1_3:55328271-55328290 None:intergenic 40.0%
CTTGCAAGGGTCTTTAAACA+TGG - chr1_3:55328269-55328288 Msa0126330:intron 40.0%
! TACCTTTTGGACCAGCTAAA+AGG - chr1_3:55328344-55328363 Msa0126330:intron 40.0%
! ACCTTTTGGACCAGCTAAAA+GGG - chr1_3:55328345-55328364 Msa0126330:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_3:55328683-55328702 None:intergenic 40.0%
!! GTGTGGAGAGTATTAATTGG+AGG - chr1_3:55328578-55328597 Msa0126330:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:55328683-55328702 Msa0126330:intron 40.0%
AACGGAGGGAGTAATTTAGT+TGG - chr1_3:55328697-55328716 Msa0126330:intron 40.0%
AAAGTCATCGGGATAGCAAT+CGG - chr1_3:55328756-55328775 Msa0126330:intron 40.0%
TTGGAAAAAGAAAGGGTGGA+AGG - chr1_3:55328974-55328993 Msa0126330:CDS 40.0%
TGGAAAAAGAAAGGGTGGAA+GGG - chr1_3:55328975-55328994 Msa0126330:CDS 40.0%
TCTCTCAACCCAGTTAATGA+CGG - chr1_3:55329365-55329384 Msa0126330:intron 40.0%
TCAAGAGAAGATGAAGAGAG+GGG + chr1_3:55329515-55329534 None:intergenic 40.0%
GGAAACATGAATTGGGAAAC+TGG - chr1_3:55329538-55329557 Msa0126330:intron 40.0%
GGGATCTTGGTTATTGTTTC+AGG - chr1_3:55329560-55329579 Msa0126330:intron 40.0%
TGTGGCTGCAATATACGATT+AGG + chr1_3:55329892-55329911 None:intergenic 40.0%
AAGGGAAAAGCTTCTTGGTA+CGG + chr1_3:55330104-55330123 None:intergenic 40.0%
GTGTGTGTGCCTAAATGATT+TGG + chr1_3:55330436-55330455 None:intergenic 40.0%
GGAGCCTAGTAGTATCTAAA+TGG + chr1_3:55330597-55330616 None:intergenic 40.0%
AGATACTACTAGGCTCCATT+TGG - chr1_3:55330600-55330619 Msa0126330:CDS 40.0%
GGGCCTTAATGGTATCATAA+CGG - chr1_3:55330865-55330884 Msa0126330:CDS 40.0%
! TCGACGAAATCGATCTCTTT+TGG + chr1_3:55331171-55331190 None:intergenic 40.0%
! AAAGAGATCGATTTCGTCGA+TGG - chr1_3:55331171-55331190 Msa0126330:CDS 40.0%
!! GACTCTGAGATAAGAGAAAC+CGG - chr1_3:55331277-55331296 Msa0126330:intron 40.0%
!! ACTCTGAGATAAGAGAAACC+GGG - chr1_3:55331278-55331297 Msa0126330:intron 40.0%
GCCCAAATCAGGTTTGATTA+AGG - chr1_3:55331324-55331343 Msa0126330:intron 40.0%
CCCCTTAATCAAACCTGATT+TGG + chr1_3:55331329-55331348 None:intergenic 40.0%
AATCAGGTTTGATTAAGGGG+AGG - chr1_3:55331329-55331348 Msa0126330:intron 40.0%
ATCAGGTTTGATTAAGGGGA+GGG - chr1_3:55331330-55331349 Msa0126330:intron 40.0%
! GCGCTTATAGAACAAGCTTT+TGG + chr1_3:55331737-55331756 None:intergenic 40.0%
GACTGCAATGTGGTAGTTTA+CGG + chr1_3:55331957-55331976 None:intergenic 40.0%
!! GATGATTTGCTTGAGTTTGG+TGG - chr1_3:55332332-55332351 Msa0126330:intron 40.0%
AGTTAACTAGCGCACCTTAT+AGG + chr1_3:55332471-55332490 None:intergenic 40.0%
TGCGCTAGTTAACTAATGCA+GGG - chr1_3:55332477-55332496 Msa0126330:intron 40.0%
! GGCATACTTGTCATTTCAGT+TGG - chr1_3:55332499-55332518 Msa0126330:intron 40.0%
TCTCCTTGAACAACGTGTAT+AGG + chr1_3:55332848-55332867 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG - chr1_3:55332889-55332908 Msa0126330:CDS 40.0%
CGGTCACAAAGAAGAAACAA+AGG - chr1_3:55333357-55333376 Msa0126330:intron 40.0%
CACAAAGAAGAAACAAAGGC+TGG - chr1_3:55333361-55333380 Msa0126330:intron 40.0%
ACAAAGGCTGGAATGTTGAT+TGG - chr1_3:55333373-55333392 Msa0126330:intron 40.0%
ATTGGAACGGCAATTATGTG+TGG - chr1_3:55333391-55333410 Msa0126330:intron 40.0%
ACTAGTGGGATGGAATGAAA+GGG - chr1_3:55333804-55333823 Msa0126330:intron 40.0%
ACAATCTTAAACCCACTAGC+AGG - chr1_3:55333845-55333864 Msa0126330:intron 40.0%
GTTCTATAGTTACCTGCTAG+TGG + chr1_3:55333860-55333879 None:intergenic 40.0%
! ACATGCTACGGAGGTTATTT+TGG - chr1_3:55333958-55333977 Msa0126330:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG + chr1_3:55334158-55334177 None:intergenic 40.0%
! TGAAAAACGCGTTGGTACAA+TGG + chr1_3:55334597-55334616 None:intergenic 40.0%
CCAGAGAGTTAGTTCAGTTA+AGG + chr1_3:55335228-55335247 None:intergenic 40.0%
CCTTAACTGAACTAACTCTC+TGG - chr1_3:55335225-55335244 Msa0126330:CDS 40.0%
CATCAATGACCTCATGCAAA+GGG + chr1_3:55335473-55335492 None:intergenic 40.0%
CTTTGCATGAGGTCATTGAT+GGG - chr1_3:55335472-55335491 Msa0126330:CDS 40.0%
TTTGCATGAGGTCATTGATG+GGG - chr1_3:55335473-55335492 Msa0126330:CDS 40.0%
ATACATCTTTCGCACTGAAG+AGG - chr1_3:55335566-55335585 Msa0126330:intron 40.0%
TACATCTTTCGCACTGAAGA+GGG - chr1_3:55335567-55335586 Msa0126330:intron 40.0%
ATCTGAATCACAGTCAACTC+AGG - chr1_3:55335651-55335670 Msa0126330:intron 40.0%
CCTTTGCACTATCACTCAAT+TGG + chr1_3:55335690-55335709 None:intergenic 40.0%
! CCAATTGAGTGATAGTGCAA+AGG - chr1_3:55335687-55335706 Msa0126330:intron 40.0%
AATCCATCTTCTTCGTCGAA+GGG + chr1_3:55335722-55335741 None:intergenic 40.0%
TAATCCATCTTCTTCGTCGA+AGG + chr1_3:55335723-55335742 None:intergenic 40.0%
!! CGAAGAAGATGGATTAACCA+TGG - chr1_3:55335727-55335746 Msa0126330:intron 40.0%
! ATGATCAAGTTAGTCTCACG+TGG - chr1_3:55335794-55335813 Msa0126330:intron 40.0%
! TTTTGGCAATTACGGCAATC+TGG + chr1_3:55335972-55335991 None:intergenic 40.0%
AGATTGCCGTAATTGCCAAA+AGG - chr1_3:55335971-55335990 Msa0126330:intron 40.0%
!! AAAGGAAGCAAAGCACCTTT+TGG + chr1_3:55335989-55336008 None:intergenic 40.0%
!! AAAAGGTGCTTTGCTTCCTT+TGG - chr1_3:55335988-55336007 Msa0126330:intron 40.0%
!! ACAGGAGCATTCTCAATTTG+TGG + chr1_3:55336386-55336405 None:intergenic 40.0%
ACAATACGGCAGATTCCATA+TGG + chr1_3:55336597-55336616 None:intergenic 40.0%
! TTTTTCCTTGAGAGGACAAG+GGG + chr1_3:55336640-55336659 None:intergenic 40.0%
!!! CTTTTTTCCTTGAGAGGACA+AGG + chr1_3:55336642-55336661 None:intergenic 40.0%
AAGGAGAAGATGCACAAGAA+TGG - chr1_3:55336770-55336789 Msa0126330:intron 40.0%
AGGAGAAGATGCACAAGAAT+GGG - chr1_3:55336771-55336790 Msa0126330:intron 40.0%
ACAAGAATGGGAGTGGATAA+TGG - chr1_3:55336783-55336802 Msa0126330:intron 40.0%
! GAAACATTTGGGTTTGAACC+TGG - chr1_3:55336843-55336862 Msa0126330:intron 40.0%
GAGATATGCAGACGAGTTTA+AGG - chr1_3:55336893-55336912 Msa0126330:intron 40.0%
AGAACATTGAGGGTGAATAC+TGG - chr1_3:55336997-55337016 Msa0126330:intron 40.0%
GAGTCCTACTGAAGAAATTG+AGG - chr1_3:55337031-55337050 Msa0126330:intron 40.0%
GTGACCTCAATTTCTTCAGT+AGG + chr1_3:55337038-55337057 None:intergenic 40.0%
TAAGGAAGGGTCATGTACAA+AGG + chr1_3:55337116-55337135 None:intergenic 40.0%
! ATCTGGAAACTGGGAGTTTT+GGG - chr1_3:55337177-55337196 Msa0126330:intron 40.0%
! GAAACTTGACTAGACTTGCT+AGG + chr1_3:55337212-55337231 None:intergenic 40.0%
AGCAGTACATAAAATCTGGG+TGG - chr1_3:55337243-55337262 Msa0126330:intron 40.0%
GTAGTGCCATGGTTGTATAT+AGG - chr1_3:55337335-55337354 Msa0126330:intron 40.0%
TGTCCTTACCCAACAAAATG+AGG + chr1_3:55337372-55337391 None:intergenic 40.0%
TATGCAATTGATTGTGCTCC+GGG - chr1_3:55337775-55337794 Msa0126330:intron 40.0%
TATGCACATGGACAAGCATA+AGG + chr1_3:55337901-55337920 None:intergenic 40.0%
GTGAGAATAAAGAACCCATC+TGG - chr1_3:55338021-55338040 Msa0126330:intron 40.0%
CAAAAGGATGTCAACCAGAT+GGG + chr1_3:55338038-55338057 None:intergenic 40.0%
!! TTAATTTTGGGTGCAGCATG+TGG - chr1_3:55338178-55338197 Msa0126330:intron 40.0%
AGATGCATGCAAATTGGAAG+AGG - chr1_3:55338274-55338293 Msa0126330:intron 40.0%
TTCAGGTAACTGCTTTCTCA+TGG + chr1_3:55338300-55338319 None:intergenic 40.0%
GATCAAATGAACTTGTGCAG+TGG + chr1_3:55338377-55338396 None:intergenic 40.0%
CTGCACAAGTTCATTTGATC+AGG - chr1_3:55338377-55338396 Msa0126330:intron 40.0%
TTTGATCAGGATGTTGCAGA+TGG - chr1_3:55338390-55338409 Msa0126330:intron 40.0%
TTGATCAGGATGTTGCAGAT+GGG - chr1_3:55338391-55338410 Msa0126330:intron 40.0%
ATCGATATCTTCACATTGGG+TGG - chr1_3:55338511-55338530 Msa0126330:intron 40.0%
TCGATATCTTCACATTGGGT+GGG - chr1_3:55338512-55338531 Msa0126330:intron 40.0%
TATTGCTATAGAGCTGTACC+GGG - chr1_3:55338864-55338883 Msa0126330:intron 40.0%
! TTGTGGAAAAGACGGTCTTT+TGG - chr1_3:55339017-55339036 Msa0126330:intron 40.0%
GTAGAACGGGATAACGTTTA+TGG - chr1_3:55339081-55339100 Msa0126330:intron 40.0%
TTAAGAAAAGGGGGTTACTC+AGG - chr1_3:55339635-55339654 Msa0126330:intron 40.0%
GCTGACATTTCTTAAAGCCT+TGG - chr1_3:55339732-55339751 Msa0126330:intron 40.0%
! TTCTTAAAGCCTTGGCTCTT+AGG - chr1_3:55339740-55339759 Msa0126330:intron 40.0%
ACAATAAGCTCTTGCATGAG+AGG + chr1_3:55339800-55339819 None:intergenic 40.0%
ATAAGCCTGTTTACTGTGTG+CGG - chr1_3:55339840-55339859 Msa0126330:intron 40.0%
TCAAAGCCTCGACAGAAAAA+TGG + chr1_3:55339914-55339933 None:intergenic 40.0%
GTTAGGTGGATGTCAAAGAA+TGG - chr1_3:55339955-55339974 Msa0126330:intron 40.0%
CAGAATGGACAATAAGGAAC+AGG + chr1_3:55340194-55340213 None:intergenic 40.0%
AGGCTTCAGAATGGACAATA+AGG + chr1_3:55340200-55340219 None:intergenic 40.0%
TCAAATGACCAACCAATGCA+AGG + chr1_3:55340220-55340239 None:intergenic 40.0%
!! TGCATTGGTTGGTCATTTGA+AGG - chr1_3:55340220-55340239 Msa0126330:intron 40.0%
! TTGGTGACTAACACAGATTG+TGG + chr1_3:55340246-55340265 None:intergenic 40.0%
TTGAGGGTCACTCATAAATC+AGG + chr1_3:55340534-55340553 None:intergenic 40.0%
TTTATGAGTGACCCTCAAAC+TGG - chr1_3:55340536-55340555 Msa0126330:intron 40.0%
!! GTTTTGATGCTACCAGTGAA+AGG - chr1_3:55340751-55340770 Msa0126330:intron 40.0%
CAAGCAAGCATATCTATCTG+TGG + chr1_3:55340832-55340851 None:intergenic 40.0%
CACAGATAGATATGCTTGCT+TGG - chr1_3:55340830-55340849 Msa0126330:intron 40.0%
AGCAATTGTGTTCATGCTCT+TGG - chr1_3:55340862-55340881 Msa0126330:intron 40.0%
!! ATTCTTGTTGAGGCATTGGA+AGG - chr1_3:55340930-55340949 Msa0126330:intron 40.0%
AGATGGGCAAAATTAGACCT+TGG - chr1_3:55340972-55340991 Msa0126330:intron 40.0%
GATGGGCAAAATTAGACCTT+GGG - chr1_3:55340973-55340992 Msa0126330:intron 40.0%
CTCATTATTCACATTGCTCC+TGG + chr1_3:55341084-55341103 None:intergenic 40.0%
CAGGAGCAATGTGAATAATG+AGG - chr1_3:55341082-55341101 Msa0126330:intron 40.0%
GAGCAATGTGAATAATGAGG+CGG - chr1_3:55341085-55341104 Msa0126330:intron 40.0%
AATTCACAAACAGGGACACT+CGG + chr1_3:55341266-55341285 None:intergenic 40.0%
! ACTGGGGTAGAAGGTATAAT+TGG + chr1_3:55341635-55341654 None:intergenic 40.0%
! TTAATAGTGCTGGAAGGTTG+GGG + chr1_3:55341776-55341795 None:intergenic 40.0%
! CTTAATAGTGCTGGAAGGTT+GGG + chr1_3:55341777-55341796 None:intergenic 40.0%
!! TTAGCCTTAATAGTGCTGGA+AGG + chr1_3:55341782-55341801 None:intergenic 40.0%
!! GTTCTTAGCCTTAATAGTGC+TGG + chr1_3:55341786-55341805 None:intergenic 40.0%
CACTATTAAGGCTAAGAACG+AGG - chr1_3:55341787-55341806 Msa0126330:intron 40.0%
AGAACGAGGATAATCATGAG+AGG - chr1_3:55341801-55341820 Msa0126330:intron 40.0%
GACAATGCAAGAGCTGTTAA+CGG - chr1_3:55341854-55341873 Msa0126330:intron 40.0%
GTTAACGGAAACATCTCTTG+TGG - chr1_3:55341869-55341888 Msa0126330:intron 40.0%
AGCACAACTCCAAATTCCAA+AGG + chr1_3:55341965-55341984 None:intergenic 40.0%
! GAATTTGGAGTTGTGCTTTC+TGG - chr1_3:55341968-55341987 Msa0126330:intron 40.0%
! TTGTGCTTTCTGGAAAGTCA+TGG - chr1_3:55341978-55341997 Msa0126330:intron 40.0%
! TTCCAAAGGGTGCGTATATT+TGG - chr1_3:55342020-55342039 Msa0126330:intron 40.0%
! CTCACCTATTTTCCAGTTCA+TGG - chr1_3:55342426-55342445 Msa0126330:intron 40.0%
GAATGAACAATGTCCATCTC+AGG + chr1_3:55342543-55342562 None:intergenic 40.0%
GATGGACATTGTTCATTCTC+AGG - chr1_3:55342545-55342564 Msa0126330:intron 40.0%
TGTTCATTCTCAGGCCATTA+TGG - chr1_3:55342554-55342573 Msa0126330:intron 40.0%
GTTCATTCTCAGGCCATTAT+GGG - chr1_3:55342555-55342574 Msa0126330:intron 40.0%
TTGGGTGACTTATTTCCTGT+CGG - chr1_3:55342674-55342693 Msa0126330:intron 40.0%
AAGTCGCCGAGTTATTCAAT+TGG - chr1_3:55342781-55342800 Msa0126330:intron 40.0%
!! TAAATCTTGGTTTTCCTCCC+AGG - chr1_3:55342837-55342856 Msa0126330:intron 40.0%
! CTCCCTTGGATTATTTTCCA+AGG + chr1_3:55342866-55342885 None:intergenic 40.0%
CTTGGAAAATAATCCAAGGG+AGG - chr1_3:55342864-55342883 Msa0126330:intron 40.0%
AGCAACAAAATGCTGGGATA+TGG - chr1_3:55342903-55342922 Msa0126330:intron 40.0%
CAGTTTAAGCTGGGAAGAAA+AGG - chr1_3:55342958-55342977 Msa0126330:intron 40.0%
CAAACATTTCGATGCCATCA+AGG + chr1_3:55343011-55343030 None:intergenic 40.0%
! CTTGATGGCATCGAAATGTT+TGG - chr1_3:55343009-55343028 Msa0126330:intron 40.0%
TAACCCTTTGCAGCTAATAC+TGG - chr1_3:55343152-55343171 Msa0126330:intron 40.0%
ACACCAGTATTAGCTGCAAA+GGG + chr1_3:55343158-55343177 None:intergenic 40.0%
AACACCAGTATTAGCTGCAA+AGG + chr1_3:55343159-55343178 None:intergenic 40.0%
! TGCAGCTAATACTGGTGTTA+AGG - chr1_3:55343160-55343179 Msa0126330:intron 40.0%
TCACAAACAATGCATGCTCT+TGG - chr1_3:55343266-55343285 Msa0126330:intron 40.0%
! AGCAACTAAAGCATTTGCTC+GGG - chr1_3:55343332-55343351 Msa0126330:intron 40.0%
ATGAAAGAGTCGTAGCAAGA+TGG + chr1_3:55343391-55343410 None:intergenic 40.0%
TCATATACAACCTGCCAAGA+AGG - chr1_3:55343598-55343617 Msa0126330:intron 40.0%
AGTATTTGCTCTCATGTACC+AGG + chr1_3:55343772-55343791 None:intergenic 40.0%
GTCGAGTTTGTCATGAATAC+TGG - chr1_3:55343971-55343990 Msa0126330:intron 40.0%
TCTTACTGACAATAAGCCAG+CGG - chr1_3:55344170-55344189 Msa0126330:intron 40.0%
AAATAATCGATCACCTAGGG+TGG + chr1_3:55344249-55344268 None:intergenic 40.0%
ACCCTAGGTGATCGATTATT+TGG - chr1_3:55344248-55344267 Msa0126330:intron 40.0%
GTCCAAATAATCGATCACCT+AGG + chr1_3:55344253-55344272 None:intergenic 40.0%
! TTCGTCCAACCTTAGTCTTT+GGG - chr1_3:55344341-55344360 Msa0126330:intron 40.0%
GGGAAAAAACCCAAAGACTA+AGG + chr1_3:55344353-55344372 None:intergenic 40.0%
TCGGACTCACCGTAAACAAT+TGG - chr1_3:55327398-55327417 Msa0126330:three_prime_UTR 45.0%
TTAAACTCCAGACGCATTGG+TGG - chr1_3:55327638-55327657 Msa0126330:exon 45.0%
GAGAGCTACAATCATAAGGG+TGG - chr1_3:55327942-55327961 Msa0126330:intron 45.0%
CGGGATGAGAAATTCTTAGG+TGG - chr1_3:55328043-55328062 Msa0126330:intron 45.0%
GAGTTTCTCCTACGGGATAT+CGG - chr1_3:55328221-55328240 Msa0126330:intron 45.0%
AGTTTCTCCTACGGGATATC+GGG - chr1_3:55328222-55328241 Msa0126330:intron 45.0%
!! TCCCTTTTAGCTGGTCCAAA+AGG + chr1_3:55328349-55328368 None:intergenic 45.0%
! TCGACGTATTCCCTTTTAGC+TGG + chr1_3:55328358-55328377 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_3:55328682-55328701 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_3:55328682-55328701 Msa0126330:intron 45.0%
AAGTCATCGGGATAGCAATC+GGG - chr1_3:55328757-55328776 Msa0126330:intron 45.0%
ATTTGGTTGAAGGGGACACA+AGG - chr1_3:55329026-55329045 Msa0126330:intron 45.0%
! GGCACTACTGATTGGTTAAG+TGG - chr1_3:55329411-55329430 Msa0126330:intron 45.0%
GGCTTCTCAGACAAACTCAA+AGG - chr1_3:55329480-55329499 Msa0126330:intron 45.0%
AATTGGGAAACTGGGGATCT+TGG - chr1_3:55329547-55329566 Msa0126330:intron 45.0%
GTACGAAAAACCTACGGTAC+AGG - chr1_3:55329955-55329974 Msa0126330:CDS 45.0%
TTGTGTGAATCCTGTACCGT+AGG + chr1_3:55329968-55329987 None:intergenic 45.0%
ATTCACACAATGCACGTGGA+CGG - chr1_3:55329978-55329997 Msa0126330:CDS 45.0%
AGGGAAAAGCTTCTTGGTAC+GGG + chr1_3:55330103-55330122 None:intergenic 45.0%
CATTAAGGCCCCTTTGGATT+AGG + chr1_3:55330856-55330875 None:intergenic 45.0%
CTAATCCAAAGGGGCCTTAA+TGG - chr1_3:55330854-55330873 Msa0126330:CDS 45.0%
TGATACCATTAAGGCCCCTT+TGG + chr1_3:55330862-55330881 None:intergenic 45.0%
CGCGCACACACACATATATA+GGG + chr1_3:55330914-55330933 None:intergenic 45.0%
! ATCGATTTCGTCGATGGTGA+GGG - chr1_3:55331177-55331196 Msa0126330:CDS 45.0%
TCGATGGTGAGGGAAAGAAA+AGG - chr1_3:55331187-55331206 Msa0126330:CDS 45.0%
ATGGTGAGGGAAAGAAAAGG+TGG - chr1_3:55331190-55331209 Msa0126330:CDS 45.0%
AGGGAAAGAAAAGGTGGTTG+TGG - chr1_3:55331196-55331215 Msa0126330:CDS 45.0%
AAGAGAAACCGGGTTTGATG+AGG - chr1_3:55331288-55331307 Msa0126330:intron 45.0%
AGAGAAACCGGGTTTGATGA+GGG - chr1_3:55331289-55331308 Msa0126330:intron 45.0%
GGTGTGTAACAGTCAAACGA+TGG - chr1_3:55331351-55331370 Msa0126330:intron 45.0%
TAAGTCACGCAGAGCCTATA+AGG - chr1_3:55332454-55332473 Msa0126330:intron 45.0%
GTGCGCTAGTTAACTAATGC+AGG - chr1_3:55332476-55332495 Msa0126330:intron 45.0%
GCGCTAGTTAACTAATGCAG+GGG - chr1_3:55332478-55332497 Msa0126330:intron 45.0%
! TGTGACCGATTCCACCATTA+AGG + chr1_3:55333345-55333364 None:intergenic 45.0%
! GGCTGGAATGTTGATTGGAA+CGG - chr1_3:55333378-55333397 Msa0126330:intron 45.0%
CATTCATTCCACTAGTGGGA+TGG - chr1_3:55333794-55333813 Msa0126330:intron 45.0%
CTTTCATTCCATCCCACTAG+TGG + chr1_3:55333805-55333824 None:intergenic 45.0%
CACTAGTGGGATGGAATGAA+AGG - chr1_3:55333803-55333822 Msa0126330:intron 45.0%
CTAGTGGGATGGAATGAAAG+GGG - chr1_3:55333805-55333824 Msa0126330:intron 45.0%
AATTGTGTGACATGCTACGG+AGG - chr1_3:55333949-55333968 Msa0126330:intron 45.0%
TCTCAGAAGCCAAACCAAAC+TGG - chr1_3:55334224-55334243 Msa0126330:intron 45.0%
!! CAAGGTTTGGGTTGATGTCA+GGG + chr1_3:55334271-55334290 None:intergenic 45.0%
!! TCAAGGTTTGGGTTGATGTC+AGG + chr1_3:55334272-55334291 None:intergenic 45.0%
AACTCTCTGGCTGTTCAGAT+TGG - chr1_3:55335238-55335257 Msa0126330:CDS 45.0%
TTGTACAGGGAAGACGAATC+AGG - chr1_3:55335431-55335450 Msa0126330:intron 45.0%
TGCTTATTGCCCTTTGCATG+AGG - chr1_3:55335461-55335480 Msa0126330:intron 45.0%
CCATCAATGACCTCATGCAA+AGG + chr1_3:55335474-55335493 None:intergenic 45.0%
CCTTTGCATGAGGTCATTGA+TGG - chr1_3:55335471-55335490 Msa0126330:CDS 45.0%
! TGATTTTCCGTCAGTTCCAC+CGG - chr1_3:55335531-55335550 Msa0126330:intron 45.0%
GTATATGACTCAAAACCCGG+TGG + chr1_3:55335550-55335569 None:intergenic 45.0%
GAATCACAGTCAACTCAGGT+TGG - chr1_3:55335655-55335674 Msa0126330:intron 45.0%
!! CAGTCAACTCAGGTTGGAAA+TGG - chr1_3:55335661-55335680 Msa0126330:intron 45.0%
! AACCATGGAAAGTGCGATAG+CGG - chr1_3:55335742-55335761 Msa0126330:intron 45.0%
TTTAGGAAGACAAGGTCTCG+AGG + chr1_3:55335931-55335950 None:intergenic 45.0%
TCGAGACCTTGTCTTCCTAA+AGG - chr1_3:55335930-55335949 Msa0126330:CDS 45.0%
! AGGACTCCTTTAGGAAGACA+AGG + chr1_3:55335939-55335958 None:intergenic 45.0%
TCTTCAGTGGGGTAGAAAAC+AGG + chr1_3:55336404-55336423 None:intergenic 45.0%
! TGTTTTCTACCCCACTGAAG+AGG - chr1_3:55336403-55336422 Msa0126330:CDS 45.0%
GATTCCATATGGTTCAGCTC+TGG + chr1_3:55336586-55336605 None:intergenic 45.0%
ATGAACGTGGGGGAACAATA+CGG + chr1_3:55336611-55336630 None:intergenic 45.0%
! TTTTCCTTGAGAGGACAAGG+GGG + chr1_3:55336639-55336658 None:intergenic 45.0%
AATTCGCTACTCGTGTTCAG+AGG - chr1_3:55336679-55336698 Msa0126330:intron 45.0%
ACTCAGGGACAAAGAAGTCA+AGG - chr1_3:55336724-55336743 Msa0126330:intron 45.0%
AAGATGCACAAGAATGGGAG+TGG - chr1_3:55336776-55336795 Msa0126330:intron 45.0%
ACTGGAACAGAACCTAATGC+AGG - chr1_3:55336807-55336826 Msa0126330:intron 45.0%
CCTTCTGTGGAGAACATTGA+GGG - chr1_3:55336987-55337006 Msa0126330:intron 45.0%
ACATTGAGGGTGAATACTGG+CGG - chr1_3:55337000-55337019 Msa0126330:intron 45.0%
TATGGAGCTGATCTGGAAAC+TGG - chr1_3:55337167-55337186 Msa0126330:intron 45.0%
ATGGAGCTGATCTGGAAACT+GGG - chr1_3:55337168-55337187 Msa0126330:intron 45.0%
! GATCTGGAAACTGGGAGTTT+TGG - chr1_3:55337176-55337195 Msa0126330:intron 45.0%
TCATAAGAGAGCAGAGATCC+TGG + chr1_3:55337293-55337312 None:intergenic 45.0%
!! TATCTGGTGTTGTAGTGCCA+TGG - chr1_3:55337324-55337343 Msa0126330:intron 45.0%
GAAAGACGTGCTAGAAGACA+AGG + chr1_3:55337404-55337423 None:intergenic 45.0%
CAGCAGGTATAAGCATGAGT+TGG + chr1_3:55337439-55337458 None:intergenic 45.0%
CAACTCATGCTTATACCTGC+TGG - chr1_3:55337437-55337456 Msa0126330:intron 45.0%
TTGCTAAGAATGTGCCACAG+CGG + chr1_3:55337614-55337633 None:intergenic 45.0%
TCTACATGCTTGAGGAATCC+CGG + chr1_3:55337796-55337815 None:intergenic 45.0%
TGAGATGGTCTACATGCTTG+AGG + chr1_3:55337804-55337823 None:intergenic 45.0%
ATATGCAACACACCCTTCGA+GGG - chr1_3:55337969-55337988 Msa0126330:intron 45.0%
GCAAAAGGATGTCAACCAGA+TGG + chr1_3:55338039-55338058 None:intergenic 45.0%
ATCTGGGTGCTCCAAAAATG+TGG - chr1_3:55338234-55338253 Msa0126330:intron 45.0%
GGTGCTCCAAAAATGTGGTA+TGG - chr1_3:55338239-55338258 Msa0126330:intron 45.0%
! GGGACACCATACCACATTTT+TGG + chr1_3:55338248-55338267 None:intergenic 45.0%
!! ACCTGACTTGCTTCATAAGC+TGG - chr1_3:55338334-55338353 Msa0126330:intron 45.0%
ACCAGCTTATGAAGCAAGTC+AGG + chr1_3:55338338-55338357 None:intergenic 45.0%
CGATATCTTCACATTGGGTG+GGG - chr1_3:55338513-55338532 Msa0126330:intron 45.0%
CCTATAAACTGGCACACCTT+TGG + chr1_3:55338719-55338738 None:intergenic 45.0%
! CCAAAGGTGTGCCAGTTTAT+AGG - chr1_3:55338716-55338735 Msa0126330:intron 45.0%
TATAGGTGTGTCCAAAACCC+TGG - chr1_3:55338733-55338752 Msa0126330:intron 45.0%
ATAGGTGTGTCCAAAACCCT+GGG - chr1_3:55338734-55338753 Msa0126330:intron 45.0%
! GAATAAAGTCCCCAGGGTTT+TGG + chr1_3:55338747-55338766 None:intergenic 45.0%
ACAATTGAACCCAGAGTGGT+AGG + chr1_3:55338785-55338804 None:intergenic 45.0%
TACCACTCTGGGTTCAATTG+TGG - chr1_3:55338784-55338803 Msa0126330:intron 45.0%
TTAATGTAGCTCCCGTTGAC+TGG - chr1_3:55338827-55338846 Msa0126330:intron 45.0%
CAGCAAAGTAATCTCCCACT+GGG + chr1_3:55338959-55338978 None:intergenic 45.0%
TCAGCAAAGTAATCTCCCAC+TGG + chr1_3:55338960-55338979 None:intergenic 45.0%
TCCCAAAAGGCTCTTAAGTG+AGG - chr1_3:55339330-55339349 Msa0126330:intron 45.0%
! CCCTCACTTAAGAGCCTTTT+GGG + chr1_3:55339334-55339353 None:intergenic 45.0%
CCCAAAAGGCTCTTAAGTGA+GGG - chr1_3:55339331-55339350 Msa0126330:intron 45.0%
CCAAAAGGCTCTTAAGTGAG+GGG - chr1_3:55339332-55339351 Msa0126330:intron 45.0%
GCTTGAACTGTAAACAACGC+AGG - chr1_3:55339592-55339611 Msa0126330:intron 45.0%
! TTAAAGCCTTGGCTCTTAGG+TGG - chr1_3:55339743-55339762 Msa0126330:intron 45.0%
GCACACAGTAAACAGGCTTA+TGG + chr1_3:55339841-55339860 None:intergenic 45.0%
TGAAACCGCACACAGTAAAC+AGG + chr1_3:55339848-55339867 None:intergenic 45.0%
GTGTGCGGTTTCAACTTCAT+TGG - chr1_3:55339855-55339874 Msa0126330:intron 45.0%
TTCATTGGAAGTAAGGGCAG+TGG - chr1_3:55339870-55339889 Msa0126330:intron 45.0%
AAAGGAATGAAGGTGGAGAG+AGG - chr1_3:55340068-55340087 Msa0126330:intron 45.0%
AAGGAATGAAGGTGGAGAGA+GGG - chr1_3:55340069-55340088 Msa0126330:intron 45.0%
!! TCCATTCTGAAGCCTTGCAT+TGG - chr1_3:55340205-55340224 Msa0126330:intron 45.0%
ACCAATGCAAGGCTTCAGAA+TGG + chr1_3:55340209-55340228 None:intergenic 45.0%
!! TTCTGAAGCCTTGCATTGGT+TGG - chr1_3:55340209-55340228 Msa0126330:intron 45.0%
TCTATCTGTGGAACAGTGAC+AGG + chr1_3:55340820-55340839 None:intergenic 45.0%
CTAGAACCAGCAAGCATATG+AGG + chr1_3:55341443-55341462 None:intergenic 45.0%
!! TCACAGAAGCATCTGTCACA+GGG + chr1_3:55341514-55341533 None:intergenic 45.0%
TGTGACAGATGCTTCTGTGA+CGG - chr1_3:55341514-55341533 Msa0126330:intron 45.0%
GAAAGATCTACTGGGGTAGA+AGG + chr1_3:55341644-55341663 None:intergenic 45.0%
CATTCCAGCTTCTACAAGAG+CGG - chr1_3:55341703-55341722 Msa0126330:intron 45.0%
! TAATAGTGCTGGAAGGTTGG+GGG + chr1_3:55341775-55341794 None:intergenic 45.0%
! CCTTAATAGTGCTGGAAGGT+TGG + chr1_3:55341778-55341797 None:intergenic 45.0%
CCAACCTTCCAGCACTATTA+AGG - chr1_3:55341775-55341794 Msa0126330:intron 45.0%
CCTTTCTGACGGGAATTGTT+TGG + chr1_3:55341896-55341915 None:intergenic 45.0%
CCAAACAATTCCCGTCAGAA+AGG - chr1_3:55341893-55341912 Msa0126330:intron 45.0%
AATACGAGGACCTTTCTGAC+GGG + chr1_3:55341906-55341925 None:intergenic 45.0%
CAATACGAGGACCTTTCTGA+CGG + chr1_3:55341907-55341926 None:intergenic 45.0%
GAAAGGTCCTCGTATTGCAA+AGG - chr1_3:55341910-55341929 Msa0126330:intron 45.0%
CTCGTATTGCAAAGGTTGTC+CGG - chr1_3:55341918-55341937 Msa0126330:intron 45.0%
CAACTGCAATGTTGAGCCTT+TGG - chr1_3:55341946-55341965 Msa0126330:intron 45.0%
AAAGTCATGGTGCAGCATTC+AGG - chr1_3:55341991-55342010 Msa0126330:intron 45.0%
GACCAAATATACGCACCCTT+TGG + chr1_3:55342025-55342044 None:intergenic 45.0%
GAAATTCTTGATGCTGGACG+TGG - chr1_3:55342184-55342203 Msa0126330:intron 45.0%
ACGTGGTTCGCCTCTATTTA+TGG - chr1_3:55342201-55342220 Msa0126330:intron 45.0%
ACAATGTCCATCTCAGGGAT+GGG + chr1_3:55342537-55342556 None:intergenic 45.0%
AACAATGTCCATCTCAGGGA+TGG + chr1_3:55342538-55342557 None:intergenic 45.0%
! ATTTTCCAAGGAAACCTGGG+AGG + chr1_3:55342854-55342873 None:intergenic 45.0%
GCTTTAGTTGCTTCACCCTT+GGG + chr1_3:55343324-55343343 None:intergenic 45.0%
TGCTTTAGTTGCTTCACCCT+TGG + chr1_3:55343325-55343344 None:intergenic 45.0%
AAAGAGTCGTAGCAAGATGG+TGG + chr1_3:55343388-55343407 None:intergenic 45.0%
AACCTGCCAAGAAGGAAAGT+GGG - chr1_3:55343606-55343625 Msa0126330:intron 45.0%
CAAACTCCCACTTTCCTTCT+TGG + chr1_3:55343615-55343634 None:intergenic 45.0%
!!! CGTGTCACTTGTTTTACGTC+TGG - chr1_3:55343713-55343732 Msa0126330:intron 45.0%
GTTTACAGCCCTAAAACACC+AGG + chr1_3:55343826-55343845 None:intergenic 45.0%
ATGAATACTGGGACTTCCGT+CGG - chr1_3:55343983-55344002 Msa0126330:intron 45.0%
! CTTCGTCCAACCTTAGTCTT+TGG - chr1_3:55344340-55344359 Msa0126330:intron 45.0%
TCTATAACCTCCATTCAGGC+GGG + chr1_3:55344375-55344394 None:intergenic 45.0%
CTCTATAACCTCCATTCAGG+CGG + chr1_3:55344376-55344395 None:intergenic 45.0%
! ATTCTGAAAGGCAAGGCTAC+CGG - chr1_3:55344529-55344548 Msa0126330:intron 45.0%
!!! TATTTCATATTATTATTTTA+TGG - chr1_3:55329238-55329257 Msa0126330:intron 5.0%
!!! ATCTTTAAAATAAATTAAAA+AGG - chr1_3:55330351-55330370 Msa0126330:CDS 5.0%
!!! TCTTTAAAATAAATTAAAAA+GGG - chr1_3:55330352-55330371 Msa0126330:CDS 5.0%
!!! TTTTTTTTTAGTATATATAT+AGG + chr1_3:55333512-55333531 None:intergenic 5.0%
!! TATTAATTAAATGTTAATAT+AGG - chr1_3:55336164-55336183 Msa0126330:CDS 5.0%
!!! AAAATTTTACAATTTAATAA+TGG + chr1_3:55337743-55337762 None:intergenic 5.0%
!! TTTAATAGTATTATAATTAT+AGG + chr1_3:55339445-55339464 None:intergenic 5.0%
!! TAATTATAATACTATTAAAA+AGG - chr1_3:55339446-55339465 Msa0126330:intron 5.0%
GGGTTAAACTCCAGACGCAT+TGG - chr1_3:55327635-55327654 Msa0126330:exon 50.0%
CTTTCAACCACCAATGCGTC+TGG + chr1_3:55327648-55327667 None:intergenic 50.0%
TAACTCTCTTCAGCTCCCTC+TGG - chr1_3:55327794-55327813 Msa0126330:CDS 50.0%
! TCGGTTTTCGATCGGTTAGG+GGG + chr1_3:55327976-55327995 None:intergenic 50.0%
! CTCGGTTTTCGATCGGTTAG+GGG + chr1_3:55327977-55327996 None:intergenic 50.0%
! GCTCGGTTTTCGATCGGTTA+GGG + chr1_3:55327978-55327997 None:intergenic 50.0%
! AGCTCGGTTTTCGATCGGTT+AGG + chr1_3:55327979-55327998 None:intergenic 50.0%
AGGCAGGTTCTTGCAGTCTA+CGG - chr1_3:55328023-55328042 Msa0126330:intron 50.0%
GTTTCTCCTACGGGATATCG+GGG - chr1_3:55328223-55328242 Msa0126330:intron 50.0%
TCAATACCCCGATATCCCGT+AGG + chr1_3:55328232-55328251 None:intergenic 50.0%
TGCACCAACCAATCCTTGCA+AGG - chr1_3:55328255-55328274 Msa0126330:intron 50.0%
GCACCAACCAATCCTTGCAA+GGG - chr1_3:55328256-55328275 Msa0126330:intron 50.0%
! AGACCCTTGCAAGGATTGGT+TGG + chr1_3:55328262-55328281 None:intergenic 50.0%
CTGTCTTTGACGAACGGTCA+TGG + chr1_3:55328391-55328410 None:intergenic 50.0%
GGGATGCTGTCTTTGACGAA+CGG + chr1_3:55328397-55328416 None:intergenic 50.0%
TTCGTCAAAGACAGCATCCC+AGG - chr1_3:55328397-55328416 Msa0126330:intron 50.0%
TGGCGTAGCCGTCATTAACT+GGG + chr1_3:55329376-55329395 None:intergenic 50.0%
GCTACGCCACTAATCTGATG+AGG - chr1_3:55329387-55329406 Msa0126330:intron 50.0%
ACGCCACTAATCTGATGAGG+TGG - chr1_3:55329390-55329409 Msa0126330:intron 50.0%
GTGCCACCTCATCAGATTAG+TGG + chr1_3:55329396-55329415 None:intergenic 50.0%
GATGAGGTGGCACTACTGAT+TGG - chr1_3:55329403-55329422 Msa0126330:intron 50.0%
CAGGATTCACACAATGCACG+TGG - chr1_3:55329974-55329993 Msa0126330:CDS 50.0%
GCGCGCACACACACATATAT+AGG + chr1_3:55330915-55330934 None:intergenic 50.0%
! GATCGATTTCGTCGATGGTG+AGG - chr1_3:55331176-55331195 Msa0126330:CDS 50.0%
CCAACTTCCCTCATCAAACC+CGG + chr1_3:55331299-55331318 None:intergenic 50.0%
CGGGTTTGATGAGGGAAGTT+GGG - chr1_3:55331297-55331316 Msa0126330:intron 50.0%
TTGATGAGGGAAGTTGGGCT+TGG - chr1_3:55331302-55331321 Msa0126330:intron 50.0%
TGGGTGCGAGCAAAATGTGT+TGG - chr1_3:55332519-55332538 Msa0126330:intron 50.0%
GGGTGCGAGCAAAATGTGTT+GGG - chr1_3:55332520-55332539 Msa0126330:intron 50.0%
GCAAGGTGTGTGTACTGTGT+AGG - chr1_3:55333991-55334010 Msa0126330:intron 50.0%
! GATTTTCCGTCAGTTCCACC+GGG - chr1_3:55335532-55335551 Msa0126330:intron 50.0%
TCAAAACCCGGTGGAACTGA+CGG + chr1_3:55335541-55335560 None:intergenic 50.0%
GATCCCTTCGACGAAGAAGA+TGG - chr1_3:55335716-55335735 Msa0126330:intron 50.0%
AACCGCTATCGCACTTTCCA+TGG + chr1_3:55335747-55335766 None:intergenic 50.0%
! AAAGTGCGATAGCGGTTCAG+AGG - chr1_3:55335750-55335769 Msa0126330:intron 50.0%
! AGGAAGACGCTGATTGTGAG+CGG - chr1_3:55335770-55335789 Msa0126330:intron 50.0%
CTTCCTAAAGGAGTCCTCAG+AGG - chr1_3:55335942-55335961 Msa0126330:CDS 50.0%
! CATCCTCTGAGGACTCCTTT+AGG + chr1_3:55335948-55335967 None:intergenic 50.0%
TGACAATCGAAGTTTCGGGC+AGG - chr1_3:55336325-55336344 Msa0126330:CDS 50.0%
TGTGGTCTACGAGCATCTTC+TGG + chr1_3:55336368-55336387 None:intergenic 50.0%
AAGAGCGAGACCTCTTCAGT+GGG + chr1_3:55336416-55336435 None:intergenic 50.0%
GTATTGTTCCCCCACGTTCA+TGG - chr1_3:55336610-55336629 Msa0126330:intron 50.0%
AAGGGGGTTTCCATGAACGT+GGG + chr1_3:55336623-55336642 None:intergenic 50.0%
! ATGGGAGTGGATAATGGCAC+TGG - chr1_3:55336789-55336808 Msa0126330:intron 50.0%
ACCTGGCCCAGAATTTACCT+TGG - chr1_3:55336860-55336879 Msa0126330:intron 50.0%
TCCAAGGTAAATTCTGGGCC+AGG + chr1_3:55336864-55336883 None:intergenic 50.0%
TGGTACCTTAGAGCCTTCTG+TGG - chr1_3:55336974-55336993 Msa0126330:intron 50.0%
GTTCTCCACAGAAGGCTCTA+AGG + chr1_3:55336982-55337001 None:intergenic 50.0%
GCCTTCTGTGGAGAACATTG+AGG - chr1_3:55336986-55337005 Msa0126330:intron 50.0%
CCCTCAATGTTCTCCACAGA+AGG + chr1_3:55336990-55337009 None:intergenic 50.0%
GGTGCTTTATGGAGCTGATC+TGG - chr1_3:55337160-55337179 Msa0126330:intron 50.0%
!!! GAAACTGGGAGTTTTGGGAG+TGG - chr1_3:55337182-55337201 Msa0126330:intron 50.0%
CATATGCAACACACCCTTCG+AGG - chr1_3:55337968-55337987 Msa0126330:intron 50.0%
TAGGTGTGTCCAAAACCCTG+GGG - chr1_3:55338735-55338754 Msa0126330:intron 50.0%
AGCCACAATTGAACCCAGAG+TGG + chr1_3:55338789-55338808 None:intergenic 50.0%
TTGTGGCTTCAACTGTGCTG+AGG - chr1_3:55338801-55338820 Msa0126330:intron 50.0%
TCCATGTGGAAGCCAGTCAA+CGG + chr1_3:55338842-55338861 None:intergenic 50.0%
GTCCACGCTTCAATCCCAAA+AGG - chr1_3:55339317-55339336 Msa0126330:intron 50.0%
!!! AGCCTTTTGGGATTGAAGCG+TGG + chr1_3:55339322-55339341 None:intergenic 50.0%
! CCCCTCACTTAAGAGCCTTT+TGG + chr1_3:55339335-55339354 None:intergenic 50.0%
GGGGTTACTCAGGATCAAAC+TGG - chr1_3:55339645-55339664 Msa0126330:intron 50.0%
GGATCAAACTGGCAACCACT+TGG - chr1_3:55339656-55339675 Msa0126330:intron 50.0%
AACTGGCAACCACTTGGTCA+TGG - chr1_3:55339662-55339681 Msa0126330:intron 50.0%
ACAAGACAGCCATGACCAAG+TGG + chr1_3:55339674-55339693 None:intergenic 50.0%
CACTTGACAACTGTAGACGC+TGG + chr1_3:55339713-55339732 None:intergenic 50.0%
AGGAATGAAGGTGGAGAGAG+GGG - chr1_3:55340070-55340089 Msa0126330:intron 50.0%
TCACTTGTCTTCATTGGGGG+TGG - chr1_3:55340277-55340296 Msa0126330:intron 50.0%
GATGCTGCATTCCCTTTCAC+TGG + chr1_3:55340766-55340785 None:intergenic 50.0%
GGCAAAATTAGACCTTGGGC+TGG - chr1_3:55340977-55340996 Msa0126330:intron 50.0%
CCTGGAAGAATGAGACGAGT+CGG + chr1_3:55341066-55341085 None:intergenic 50.0%
CGGCGGTGATAAAGCATATG+AGG + chr1_3:55341303-55341322 None:intergenic 50.0%
TCATCTCCGTGTTGAGCTAG+CGG + chr1_3:55341323-55341342 None:intergenic 50.0%
GTGGTTCCTCATATGCTTGC+TGG - chr1_3:55341434-55341453 Msa0126330:intron 50.0%
!! AGAAGCATCTGTCACAGGGA+TGG + chr1_3:55341510-55341529 None:intergenic 50.0%
!! GTCACAGAAGCATCTGTCAC+AGG + chr1_3:55341515-55341534 None:intergenic 50.0%
GTGACAGATGCTTCTGTGAC+GGG - chr1_3:55341515-55341534 Msa0126330:intron 50.0%
GGGTGAGAAGGATGCTATTG+CGG - chr1_3:55341535-55341554 Msa0126330:intron 50.0%
TTACTGGTGCAGAATCAGCG+AGG - chr1_3:55341678-55341697 Msa0126330:intron 50.0%
CGGACAACCTTTGCAATACG+AGG + chr1_3:55341920-55341939 None:intergenic 50.0%
! CAACATTGCAGTTGATGCGC+CGG + chr1_3:55341940-55341959 None:intergenic 50.0%
CACACGGTAAAGCCATGAAC+TGG + chr1_3:55342441-55342460 None:intergenic 50.0%
CATCTCAGGGATGGGTAAAG+AGG + chr1_3:55342529-55342548 None:intergenic 50.0%
CTCTTTACCCATCCCTGAGA+TGG - chr1_3:55342527-55342546 Msa0126330:intron 50.0%
CGCCGAGTTATTCAATTGGC+TGG - chr1_3:55342785-55342804 Msa0126330:intron 50.0%
! GTTTTCCTCCCAGGTTTCCT+TGG - chr1_3:55342846-55342865 Msa0126330:intron 50.0%
CAGCAGGATGTAAAGGAGGA+AGG + chr1_3:55342984-55343003 None:intergenic 50.0%
CTTCCTCCTTTACATCCTGC+TGG - chr1_3:55342982-55343001 Msa0126330:intron 50.0%
AAAAAGTAGGGGCTGCCCAA+GGG - chr1_3:55343306-55343325 Msa0126330:intron 50.0%
CAACCTGCCAAGAAGGAAAG+TGG - chr1_3:55343605-55343624 Msa0126330:intron 50.0%
GAAGGAAAGTGGGAGTTTGC+TGG - chr1_3:55343616-55343635 Msa0126330:intron 50.0%
CTCCACCATTTACACTGGTC+TGG + chr1_3:55344035-55344054 None:intergenic 50.0%
CAGACCAGTGTAAATGGTGG+AGG - chr1_3:55344033-55344052 Msa0126330:intron 50.0%
! ACCAGTGTAAATGGTGGAGG+TGG - chr1_3:55344036-55344055 Msa0126330:intron 50.0%
TCCACCTCCACCATTTACAC+TGG + chr1_3:55344040-55344059 None:intergenic 50.0%
GTGGAGGTGGAAGTGATCAA+GGG - chr1_3:55344049-55344068 Msa0126330:intron 50.0%
TGGAGGTGGAAGTGATCAAG+GGG - chr1_3:55344050-55344069 Msa0126330:intron 50.0%
!! GTGGGTGTGTGCTGATTCAT+GGG + chr1_3:55344078-55344097 None:intergenic 50.0%
ATGAATCAGCACACACCCAC+CGG - chr1_3:55344078-55344097 Msa0126330:intron 50.0%
CTTCAGTACTGCAACAGCTC+CGG + chr1_3:55344100-55344119 None:intergenic 50.0%
TCACAAAACCCAACCACCCT+AGG - chr1_3:55344233-55344252 Msa0126330:intron 50.0%
ATCGATCACCTAGGGTGGTT+GGG + chr1_3:55344244-55344263 None:intergenic 50.0%
AATCGATCACCTAGGGTGGT+TGG + chr1_3:55344245-55344264 None:intergenic 50.0%
TATAACCTCCATTCAGGCGG+GGG + chr1_3:55344373-55344392 None:intergenic 50.0%
CTATAACCTCCATTCAGGCG+GGG + chr1_3:55344374-55344393 None:intergenic 50.0%
TGGACTCTAGGTGCCTATGT+TGG - chr1_3:55344626-55344645 Msa0126330:intron 50.0%
GCCTGTGAGAGGAGGAAGAA+AGG - chr1_3:55327204-55327223 Msa0126330:three_prime_UTR 55.0%
GCCTTTCTTCCTCCTCTCAC+AGG + chr1_3:55327208-55327227 None:intergenic 55.0%
TGAGAGGAGGAAGAAAGGCG+TGG - chr1_3:55327209-55327228 Msa0126330:three_prime_UTR 55.0%
! GAGAGGAGGAAGAAAGGCGT+GGG - chr1_3:55327210-55327229 Msa0126330:three_prime_UTR 55.0%
CAAGCACAAGACGTGCCAGA+GGG + chr1_3:55327812-55327831 None:intergenic 55.0%
TCAAGCACAAGACGTGCCAG+AGG + chr1_3:55327813-55327832 None:intergenic 55.0%
TCTGGCACGTCTTGTGCTTG+AGG - chr1_3:55327812-55327831 Msa0126330:CDS 55.0%
CTGGCACGTCTTGTGCTTGA+GGG - chr1_3:55327813-55327832 Msa0126330:CDS 55.0%
! CGGTTTTCGATCGGTTAGGG+GGG + chr1_3:55327975-55327994 None:intergenic 55.0%
GGCAGGTTCTTGCAGTCTAC+GGG - chr1_3:55328024-55328043 Msa0126330:intron 55.0%
GTGGCGTAGCCGTCATTAAC+TGG + chr1_3:55329377-55329396 None:intergenic 55.0%
CCGGGTTTGATGAGGGAAGT+TGG - chr1_3:55331296-55331315 Msa0126330:intron 55.0%
AGTTGGGCTTGGCCCAAATC+AGG - chr1_3:55331313-55331332 Msa0126330:intron 55.0%
TGATGGGGACCGAGCTTATG+AGG - chr1_3:55335488-55335507 Msa0126330:CDS 55.0%
AGATGCACTTGTCGTCGTCG+AGG + chr1_3:55335635-55335654 None:intergenic 55.0%
GGCAATCTGGACATCCTCTG+AGG + chr1_3:55335959-55335978 None:intergenic 55.0%
TCGGGCAGGTCATTGCTAGA+TGG - chr1_3:55336339-55336358 Msa0126330:CDS 55.0%
AGAGCGAGACCTCTTCAGTG+GGG + chr1_3:55336415-55336434 None:intergenic 55.0%
CAAGAGCGAGACCTCTTCAG+TGG + chr1_3:55336417-55336436 None:intergenic 55.0%
CTGAAGAGGTCTCGCTCTTG+TGG - chr1_3:55336417-55336436 Msa0126330:CDS 55.0%
CGCTCCAGAGCTGAACCATA+TGG - chr1_3:55336579-55336598 Msa0126330:intron 55.0%
AGGGGGTTTCCATGAACGTG+GGG + chr1_3:55336622-55336641 None:intergenic 55.0%
CAAGGGGGTTTCCATGAACG+TGG + chr1_3:55336624-55336643 None:intergenic 55.0%
GAAACCCCCTTGTCCTCTCA+AGG - chr1_3:55336632-55336651 Msa0126330:intron 55.0%
TGAGGGTGAATACTGGCGGA+TGG - chr1_3:55337004-55337023 Msa0126330:intron 55.0%
ATGGAAGGTGGGGTGAAGTC+TGG + chr1_3:55338561-55338580 None:intergenic 55.0%
TTTCCTCGAGCCTACCACTC+TGG - chr1_3:55338772-55338791 Msa0126330:intron 55.0%
TTCCTCGAGCCTACCACTCT+GGG - chr1_3:55338773-55338792 Msa0126330:intron 55.0%
CCATGTGGAAGCCAGTCAAC+GGG + chr1_3:55338841-55338860 None:intergenic 55.0%
TATAGAGCTGTACCGGGAGC+AGG - chr1_3:55338870-55338889 Msa0126330:intron 55.0%
ATAGAGCTGTACCGGGAGCA+GGG - chr1_3:55338871-55338890 Msa0126330:intron 55.0%
AGCTATTGCTTGGGGCTGCT+AGG - chr1_3:55338920-55338939 Msa0126330:intron 55.0%
GCTATTGCTTGGGGCTGCTA+GGG - chr1_3:55338921-55338940 Msa0126330:intron 55.0%
! AAGCCTTGGCTCTTAGGTGG+AGG - chr1_3:55339746-55339765 Msa0126330:intron 55.0%
TGGAAGTAAGGGCAGTGGCA+AGG - chr1_3:55339875-55339894 Msa0126330:intron 55.0%
AGTGACAGGCAGCAGCAGAT+AGG + chr1_3:55340806-55340825 None:intergenic 55.0%
AAGAAGTTAGGGCCAGCCCA+AGG + chr1_3:55340992-55341011 None:intergenic 55.0%
! CCGACTCGTCTCATTCTTCC+AGG - chr1_3:55341063-55341082 Msa0126330:intron 55.0%
CTCCATACCTACGCGTGAGA+TGG - chr1_3:55341187-55341206 Msa0126330:intron 55.0%
AGCCATCTCACGCGTAGGTA+TGG + chr1_3:55341192-55341211 None:intergenic 55.0%
! CGATTAGCCATCTCACGCGT+AGG + chr1_3:55341197-55341216 None:intergenic 55.0%
!! TGCTTCTGTGACGGGTGAGA+AGG - chr1_3:55341523-55341542 Msa0126330:intron 55.0%
GCGGTGCTTCGTGAAGATTC+AGG - chr1_3:55341554-55341573 Msa0126330:intron 55.0%
GCATCCGCTCTTGTAGAAGC+TGG + chr1_3:55341710-55341729 None:intergenic 55.0%
TCTACAAGAGCGGATGCCAG+CGG - chr1_3:55341713-55341732 Msa0126330:intron 55.0%
CTGGAAGGTTGGGGGTTTGA+AGG + chr1_3:55341767-55341786 None:intergenic 55.0%
CTGCCAGCAGGATGTAAAGG+AGG + chr1_3:55342988-55343007 None:intergenic 55.0%
AGGCTGCCAGCAGGATGTAA+AGG + chr1_3:55342991-55343010 None:intergenic 55.0%
GAAAAAGTAGGGGCTGCCCA+AGG - chr1_3:55343305-55343324 Msa0126330:intron 55.0%
CTCCCACTTTCCTTCTTGGC+AGG + chr1_3:55343611-55343630 None:intergenic 55.0%
GCTTGTGAAAGCTGCCCTTG+AGG + chr1_3:55344009-55344028 None:intergenic 55.0%
CAAGGGCAGCTTTCACAAGC+TGG - chr1_3:55344009-55344028 Msa0126330:intron 55.0%
GCTGGCCAGACCAGTGTAAA+TGG - chr1_3:55344027-55344046 Msa0126330:intron 55.0%
GGCCAGACCAGTGTAAATGG+TGG - chr1_3:55344030-55344049 Msa0126330:intron 55.0%
GGTGGAGGTGGAAGTGATCA+AGG - chr1_3:55344048-55344067 Msa0126330:intron 55.0%
!! GGTGGGTGTGTGCTGATTCA+TGG + chr1_3:55344079-55344098 None:intergenic 55.0%
AGTACTGCAACAGCTCCGGT+GGG + chr1_3:55344096-55344115 None:intergenic 55.0%
ATTGGGATCTGTTCAGCCGC+TGG + chr1_3:55344189-55344208 None:intergenic 55.0%
!!! GGTTTTTTCCCCCGCCTGAA+TGG - chr1_3:55344362-55344381 Msa0126330:intron 55.0%
! TTTTTCCCCCGCCTGAATGG+AGG - chr1_3:55344365-55344384 Msa0126330:intron 55.0%
GTCGTCGTCGAGGAACTCGT+CGG + chr1_3:55335625-55335644 None:intergenic 60.0%
GGGGGTTTCCATGAACGTGG+GGG + chr1_3:55336621-55336640 None:intergenic 60.0%
TGCAACACACCCTTCGAGGG+TGG - chr1_3:55337972-55337991 Msa0126330:intron 60.0%
GCAACACACCCTTCGAGGGT+GGG - chr1_3:55337973-55337992 Msa0126330:intron 60.0%
AGGGTGGGAGGGGATGCTAT+GGG - chr1_3:55337988-55338007 Msa0126330:intron 60.0%
AACCCAGAGTGGTAGGCTCG+AGG + chr1_3:55338778-55338797 None:intergenic 60.0%
!! CCCGTTGACTGGCTTCCACA+TGG - chr1_3:55338838-55338857 Msa0126330:intron 60.0%
TAGAGCTGTACCGGGAGCAG+GGG - chr1_3:55338872-55338891 Msa0126330:intron 60.0%
AAGTCTTACGCCCCTGCTCC+CGG + chr1_3:55338885-55338904 None:intergenic 60.0%
GGAAGCAGTACGAGCCCAGT+GGG - chr1_3:55338942-55338961 Msa0126330:intron 60.0%
TCACCGCCGCTAGCTCAACA+CGG - chr1_3:55341314-55341333 Msa0126330:intron 60.0%
TCTCCGTGTTGAGCTAGCGG+CGG + chr1_3:55341320-55341339 None:intergenic 60.0%
CATCCTGCTGGCAGCCTTGA+TGG - chr1_3:55342994-55343013 Msa0126330:intron 60.0%
ATGCCATCAAGGCTGCCAGC+AGG + chr1_3:55343000-55343019 None:intergenic 60.0%
AAAGCTGCCCTTGAGGCCGA+CGG + chr1_3:55344002-55344021 None:intergenic 60.0%
CAGTACTGCAACAGCTCCGG+TGG + chr1_3:55344097-55344116 None:intergenic 60.0%
ACACACCCTTCGAGGGTGGG+AGG - chr1_3:55337976-55337995 Msa0126330:intron 65.0%
CACACCCTTCGAGGGTGGGA+GGG - chr1_3:55337977-55337996 Msa0126330:intron 65.0%
ACACCCTTCGAGGGTGGGAG+GGG - chr1_3:55337978-55337997 Msa0126330:intron 65.0%
CATCCCCTCCCACCCTCGAA+GGG + chr1_3:55337984-55338003 None:intergenic 65.0%
GAGGGTGGGAGGGGATGCTA+TGG - chr1_3:55337987-55338006 Msa0126330:intron 65.0%
GGGAAGCAGTACGAGCCCAG+TGG - chr1_3:55338941-55338960 Msa0126330:intron 65.0%
GGGCCTCCACCTAAGAGCCA+AGG + chr1_3:55339752-55339771 None:intergenic 65.0%
TGGGACTTCCGTCGGCCTCA+AGG - chr1_3:55343991-55344010 Msa0126330:intron 65.0%
GGGACTTCCGTCGGCCTCAA+GGG - chr1_3:55343992-55344011 Msa0126330:intron 65.0%
!! ATGGCGGAGGCGCCTGTGAG+AGG - chr1_3:55327193-55327212 Msa0126330:three_prime_UTR 70.0%
GCATCCCCTCCCACCCTCGA+AGG + chr1_3:55337985-55338004 None:intergenic 70.0%
!! GCGGAGGCGCCTGTGAGAGG+AGG - chr1_3:55327196-55327215 Msa0126330:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 55327193 55344700 55327193 ID=Msa0126330;Name=Msa0126330
chr1_3 mRNA 55327193 55344700 55327193 ID=Msa0126330-mRNA-1;Parent=Msa0126330;Name=Msa0126330-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.83|0.84|0.84|1|1|13|446|1289
chr1_3 exon 55327193 55327944 55327193 ID=Msa0126330-mRNA-1:exon:17190;Parent=Msa0126330-mRNA-1
chr1_3 exon 55328837 55329034 55328837 ID=Msa0126330-mRNA-1:exon:17189;Parent=Msa0126330-mRNA-1
chr1_3 exon 55329671 55329774 55329671 ID=Msa0126330-mRNA-1:exon:17188;Parent=Msa0126330-mRNA-1
chr1_3 exon 55329865 55331215 55329865 ID=Msa0126330-mRNA-1:exon:17187;Parent=Msa0126330-mRNA-1
chr1_3 exon 55332840 55333208 55332840 ID=Msa0126330-mRNA-1:exon:17186;Parent=Msa0126330-mRNA-1
chr1_3 exon 55333538 55333699 55333538 ID=Msa0126330-mRNA-1:exon:17185;Parent=Msa0126330-mRNA-1
chr1_3 exon 55334511 55334732 55334511 ID=Msa0126330-mRNA-1:exon:17184;Parent=Msa0126330-mRNA-1
chr1_3 exon 55334841 55335350 55334841 ID=Msa0126330-mRNA-1:exon:17183;Parent=Msa0126330-mRNA-1
chr1_3 exon 55335469 55335546 55335469 ID=Msa0126330-mRNA-1:exon:17182;Parent=Msa0126330-mRNA-1
chr1_3 exon 55335901 55335972 55335901 ID=Msa0126330-mRNA-1:exon:17181;Parent=Msa0126330-mRNA-1
chr1_3 exon 55336092 55336454 55336092 ID=Msa0126330-mRNA-1:exon:17180;Parent=Msa0126330-mRNA-1
chr1_3 exon 55340542 55340637 55340542 ID=Msa0126330-mRNA-1:exon:17179;Parent=Msa0126330-mRNA-1
chr1_3 exon 55344662 55344700 55344662 ID=Msa0126330-mRNA-1:exon:17178;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55344662 55344700 55344662 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55340542 55340637 55340542 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55336092 55336454 55336092 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55335901 55335972 55335901 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55335469 55335546 55335469 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55334841 55335350 55334841 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55334511 55334732 55334511 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55333538 55333699 55333538 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55332840 55333208 55332840 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55329865 55331215 55329865 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55329671 55329774 55329671 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55328837 55329034 55328837 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 CDS 55327639 55327944 55327639 ID=Msa0126330-mRNA-1:cds;Parent=Msa0126330-mRNA-1
chr1_3 three_prime_UTR 55327193 55327638 55327193 ID=Msa0126330-mRNA-1:three_prime_utr;Parent=Msa0126330-mRNA-1
Gene Sequence

>Msa0126330

ATGGCGGAGGCGCCTGTGAGAGGAGGAAGAAAGGCGTGGGGTTTTAGGAGAATGACAGATGACTCTGAGATAAGAGAAACCGGGTTTGATGAGGGAAGTTGGGCTTGGCCCAAATCAGGTTTGATTAAGGGGAGGGGAAGACGAATCAGGACATTATTGCTTATTGCCCTTTGCATGAGGTCATTGATGGGGACCGAGCTTATGAGGATATGTGTTAAAGAAGATGATGATTTTCCGTCAGTTCCACCGGGTTTTGAGTCATATACATCTTTCGCACTGAAGAGGGTAGAAGAGAATGAGAAAAACAATGATAAAAATCCGACGAGTTCCTCGACGACGACAAGTGCATCTGAATCACAGTCAACTCAGGTTGGAAATGGTGTCCAATTGAGTGATAGTGCAAAGGTTTCTAGATCCCTTCGACGAAGAAGATGGATTAACCATGGAAAGTGCGATAGCGGTTCAGAGGAAGACGCTGATTGTGAGCGGCATGATCAAAATTTCTCCTCGAGACCTTGTCTTCCTAAAGGAGTCCTCAGAGGATGTCCAGATTGCCGTAATTGCCAAAAGGTCATTGCTAGATGGCGACCAGAAGATGCTCGTAGACCACAAATTGAGAATGCTCCTGTTTTCTACCCCACTGAAGAGGAATTTCAAGATACTTTGAAATATATATCGAAGATTCGCTCCAGAGCTGAACCATATGGAATCTGCCGTATTGTTCCCCCACGTTCATGGAAACCCCCTTGTCCTCTCAAGGAAAAAAGTATATGGGAGGGTTCTAAATTCGCTACTCGTGTTCAGAGGATTGACAAACTTCAGAATCGTAACTCAGGGACAAAGAAGTCAAGGATTCAAAATAATATGAAAAGGAAAAGGAGAAGATGCACAAGAATGGGAGTGGATAATGGCACTGGAACAGAACCTAATGCAGGATTTTGTGAAGTTGAAACATTTGGGTTTGAACCTGGCCCAGAATTTACCTTGGAAACATTTAAGAGATATGCAGACGAGTTTAAGGCCGAATACTTCAAAAATGATAATTTATCTCATCCAAGTGCTAATACAGCAATTTTAAATGGTACCTTAGAGCCTTCTGTGGAGAACATTGAGGGTGAATACTGGCGGATGGTTGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACTGGGAGTTTTGGGAGTGGTTTTCCTAGCAAGTCTAGTCAAGTTTCTGTTTCATACGAGCAGTACATAAAATCTGGGTGGAATTTAAATAACTTTGCAAGGTTACCAGGATCTCTGCTCTCTTATGAAACCAGTGATATATCTGGTGTTGTAGTGCCATGGTTGTATATAGGAATGTGCTTTTCCTCATTTTGTTGGCATGTGGAAGATCACCATTTATATTCATTGAATTATATGCATCTGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGCAAAAGATGCATGCAAATTGGAAGAGGCCATGAGAAAGCAGTTACCTGAACTTTTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACACAGCTTTCTCCTTCTATTCTTAAGTCCAAAGGTGTGCCAGTTTATAGGTGTGTCCAAAACCCTGGGGACTTTATTCTAACATTTCCTCGAGCCTACCACTCTGGGTTCAATTGTGGCTTCAACTGTGCTGAGGCTGTTAATGTAGCTCCCGTTGACTGGCTTCCACATGGACATATTGCTATAGAGCTGTACCGGGAGCAGGGGCGTAAGACTTCTGTATCTCATGATAAGCTATTGCTTGGGGCTGCTAGGGAAGCAGTACGAGCCCAGTGGGAGATTACTTTGCTGAAGAAAAACACTTCGGATAATCTAAAATGGAAAGATGTTTGTGGAAAAGACGGTCTTTTGGCAAAAGCATTCAAGGCACGTGTTGAGATGGAGCGGGTAAGAAGGGAATTTCTCTGCAGTTCTTCAAAGGCATTAAAAATGGAGAGTAGTTTTGATGCTACCAGTGAAAGGGAATGCAGCATCTGCTTCTTTGATTTACACCTATCTGCTGCTGCCTGTCACTGTTCCACAGATAGATATGCTTGCTTGGATCATGCTAAGCAATTGTGTTCATGCTCTTGGAGCTCCAAATTTTTCCTCTTTCGTTATGATATTAGCGAACTAAATATTCTTGTTGAGGCATTGGAAGGAAAATTAAGTGCAGTTTATAGATGGGCAAAATTAGACCTTGGGCTGGCCCTAACTTCTTATATCTCAGTAGATAAAAAAACAGTATGTCGGGAATTGAAATTGCATTCATCCGACTCGTCTCATTCTTCCAGGAGCAATGTGAATAATGAGGCGGCTTTGACAGATGTTCCAATAGTGGATCAAGCAAATTCTGCAAATAGCAAGGATCAGAGCTATCTTAAACAGAAGAATAGCTCCATACCTACGCGTGAGATGGCTAATCGTAAGATCTTTGCTATTAAAGGAGAGTCTATCATTTGTAGATCAAAGCCGAGTGTCCCTGTTTGTGAATTCAATCAAGAGGATTCCTCATATGCTTTATCACCGCCGCTAGCTCAACACGGAGATGAGAAAAGTACACATTCAAGACCTAAAGATATCATACTTCTTAGTGACGACGAAGATGATGAAATGAAGATGTCAGATTCAAATAGAAGGAAGGTGGTTCCTCATATGCTTGCTGGTTCTAGAAATAAAGCAAGCCTGTGTAGTGATATAGAAGATAAAAGCTTGACCATCCCTGTGACAGATGCTTCTGTGACGGGTGAGAAGGATGCTATTGCGGTGCTTCGTGAAGATTCAGGCTCAAATTCAACTCAGCTTTTACAAGTAAAACAAGAATGTCACGAGCAGAGAAGACCAATTATACCTTCTACCCCAGTAGATCTTTCTTTTCATATAGGTCTTACTGGTGCAGAATCAGCGAGGAACATTCCAGCTTCTACAAGAGCGGATGCCAGCGGTCATAGTTTAAAAAGTTTGGAGGTTTGTCCTTCAAACCCCCAACCTTCCAGCACTATTAAGGCTAAGAACGAGGATAATCATGAGAGGTTTGATGGATGTTCCACTTCTAATGTAGCAGACAATGCAAGAGCTGTTAACGGAAACATCTCTTGTGGTCCAAACAATTCCCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTTTGGAATTTGGAGTTGTGCTTTCTGGAAAGTCATGGTGCAGCATTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGTGTTCGATACATAAATATCTTAGATCCATGCAGTACATGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTCGCCTCTATTTATGGTTTCCTTGGAAAATAATCCAAGGGAGGTTTTCATTCATATGTCAGCAACAAAATGCTGGGATATGGTAAGAGAGAGAGTGAATCTAGAGATAGCAAAACAGTTTAAGCTGGGAAGAAAAGGCCTTCCTCCTTTACATCCTGCTGGCAGCCTTGATGGCATCGAAATGTTTGGATTTTCTTCACCAGAAATAGTGAAGGCTATTGAGGCACTAGATCGTAGTCGAGTTTGTCATGAATACTGGGACTTCCGTCGGCCTCAAGGGCAGCTTTCACAAGCTGGCCAGACCAGTGTAAATGGTGGAGGTGGAAGTGATCAAGGGGTTCCCATGAATCAGCACACACCCACCGGAGCTGTTGCAGTACTGAAGAGCCTATTTAAAAAAGCGAATCCGGAAGAATTGAACTCATTGTACAACATTCTTACTGACAATAAGCCAGCGGCTGAACAGATCCCAATTGCAAAAATTCTCTATGAAGAAATTCACAAAACCCAACCACCCTAG
Protein sequence

>Msa0126330

MAEAPVRGGRKAWGFRRMTDDSEIRETGFDEGSWAWPKSGLIKGRGRRIRTLLLIALCMRSLMGTELMRICVKEDDDFPSVPPGFESYTSFALKRVEENEKNNDKNPTSSSTTTSASESQSTQVGNGVQLSDSAKVSRSLRRRRWINHGKCDSGSEEDADCERHDQNFSSRPCLPKGVLRGCPDCRNCQKVIARWRPEDARRPQIENAPVFYPTEEEFQDTLKYISKIRSRAEPYGICRIVPPRSWKPPCPLKEKSIWEGSKFATRVQRIDKLQNRNSGTKKSRIQNNMKRKRRRCTRMGVDNGTGTEPNAGFCEVETFGFEPGPEFTLETFKRYADEFKAEYFKNDNLSHPSANTAILNGTLEPSVENIEGEYWRMVESPTEEIEVLYGADLETGSFGSGFPSKSSQVSVSYEQYIKSGWNLNNFARLPGSLLSYETSDISGVVVPWLYIGMCFSSFCWHVEDHHLYSLNYMHLGAPKMWYGVPAKDACKLEEAMRKQLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYRCVQNPGDFILTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYREQGRKTSVSHDKLLLGAAREAVRAQWEITLLKKNTSDNLKWKDVCGKDGLLAKAFKARVEMERVRREFLCSSSKALKMESSFDATSERECSICFFDLHLSAAACHCSTDRYACLDHAKQLCSCSWSSKFFLFRYDISELNILVEALEGKLSAVYRWAKLDLGLALTSYISVDKKTVCRELKLHSSDSSHSSRSNVNNEAALTDVPIVDQANSANSKDQSYLKQKNSSIPTREMANRKIFAIKGESIICRSKPSVPVCEFNQEDSSYALSPPLAQHGDEKSTHSRPKDIILLSDDEDDEMKMSDSNRRKVVPHMLAGSRNKASLCSDIEDKSLTIPVTDASVTGEKDAIAVLREDSGSNSTQLLQVKQECHEQRRPIIPSTPVDLSFHIGLTGAESARNIPASTRADASGHSLKSLEVCPSNPQPSSTIKAKNEDNHERFDGCSTSNVADNARAVNGNISCGPNNSRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSIQAIFPKGFRSRVRYINILDPCSTCYYISEILDAGRGSPLFMVSLENNPREVFIHMSATKCWDMVRERVNLEIAKQFKLGRKGLPPLHPAGSLDGIEMFGFSSPEIVKAIEALDRSRVCHEYWDFRRPQGQLSQAGQTSVNGGGGSDQGVPMNQHTPTGAVAVLKSLFKKANPEELNSLYNILTDNKPAAEQIPIAKILYEEIHKTQPP*