AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171230 MtrunA17_Chr1g0189211 98.132 1231 23 0 42 1272 1 1231 0.0 2514
Msa0171230 MtrunA17_Chr8g0380981 56.838 563 236 2 173 731 25 584 0.0 661
Msa0171230 MtrunA17_Chr8g0380981 33.613 238 130 4 1059 1268 816 1053 1.28e-32 137
Msa0171230 MtrunA17_Chr7g0261401 47.845 696 324 9 61 738 3 677 0.0 651
Msa0171230 MtrunA17_Chr2g0303101 56.441 590 249 4 166 753 27 610 0.0 650
Msa0171230 MtrunA17_Chr2g0303101 36.929 241 140 3 1039 1268 762 1001 4.65e-35 145
Msa0171230 MtrunA17_Chr5g0397501 40.380 421 210 7 300 711 295 683 4.98e-88 313
Msa0171230 MtrunA17_Chr5g0397501 58.108 74 27 1 186 259 23 92 1.14e-17 89.4
Msa0171230 MtrunA17_Chr5g0410721 30.199 553 293 15 187 724 85 559 3.74e-59 220
Msa0171230 MtrunA17_Chr1g0164731 29.705 542 280 16 188 711 42 500 4.66e-51 191
Msa0171230 MtrunA17_Chr3g0116441 33.773 379 169 12 191 553 18 330 1.88e-50 196
Msa0171230 MtrunA17_Chr1g0164761 27.273 616 327 17 189 789 6 515 5.32e-45 172
Msa0171230 MtrunA17_Chr1g0199511 43.784 185 91 2 402 578 295 474 7.33e-39 158
Msa0171230 MtrunA17_Chr7g0214951 38.760 129 62 5 412 538 88 201 3.20e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171230 AT1G08620.3 55.016 1256 483 22 45 1267 14 1220 0.0 1233
Msa0171230 AT1G08620.2 55.060 1255 482 22 46 1267 1 1206 0.0 1231
Msa0171230 AT1G08620.4 55.060 1255 482 22 46 1267 1 1206 0.0 1231
Msa0171230 AT1G08620.1 55.060 1255 482 22 46 1267 1 1206 0.0 1231
Msa0171230 AT4G20400.1 57.246 552 230 4 173 721 38 586 0.0 660
Msa0171230 AT4G20400.1 41.667 192 101 2 1059 1246 746 930 6.77e-38 155
Msa0171230 AT1G30810.3 57.857 560 225 6 172 727 40 592 0.0 649
Msa0171230 AT1G30810.3 48.299 147 70 1 1043 1189 648 788 7.73e-35 144
Msa0171230 AT1G30810.2 57.857 560 225 6 172 727 40 592 0.0 649
Msa0171230 AT1G30810.2 48.299 147 70 1 1043 1189 648 788 7.73e-35 144
Msa0171230 AT1G30810.1 57.857 560 225 6 172 727 40 592 0.0 649
Msa0171230 AT1G30810.1 48.299 147 70 1 1043 1189 648 788 7.73e-35 144
Msa0171230 AT4G20400.2 57.224 526 219 4 199 721 7 529 0.0 624
Msa0171230 AT4G20400.2 41.667 192 101 2 1059 1246 689 873 7.94e-38 154
Msa0171230 AT2G34880.1 55.080 561 216 11 173 720 43 580 0.0 613
Msa0171230 AT2G34880.1 45.333 150 78 1 1046 1195 636 781 2.26e-32 136
Msa0171230 AT2G38950.1 42.669 682 321 12 46 724 1 615 7.01e-167 514
Msa0171230 AT1G63490.1 41.568 421 204 7 300 711 39 426 2.32e-93 327
Msa0171230 AT1G63490.4 41.568 421 204 7 300 711 292 679 1.65e-92 328
Msa0171230 AT1G63490.4 54.930 71 28 1 191 261 31 97 2.29e-15 82.4
Msa0171230 AT1G63490.2 41.568 421 204 7 300 711 292 679 1.78e-92 328
Msa0171230 AT1G63490.2 54.930 71 28 1 191 261 31 97 2.29e-15 82.4
Msa0171230 AT5G46910.2 32.613 509 246 18 187 680 99 525 4.87e-59 216
Msa0171230 AT5G46910.1 32.613 509 246 18 187 680 99 525 2.26e-58 217
Msa0171230 AT3G48430.1 34.309 376 197 11 191 553 20 358 1.49e-45 180
Msa0171230 AT1G63490.3 39.662 237 122 5 479 711 1 220 2.57e-42 169
Msa0171230 AT5G04240.1 49.032 155 76 1 402 553 263 417 1.02e-40 164

Find 339 sgRNAs with CRISPR-Local

Find 827 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTACCTTCACTATTTC+TGG 0.085763 1_4:+55867768 None:intergenic
CGTAAGATCTTTGCTATTAA+AGG 0.127451 1_4:-55869595 Msa0171230:CDS
ACATACTTCTAGGTGCTTTA+TGG 0.157721 1_4:-55873651 Msa0171230:intron
GAATTTGGAGTTGTGCTTTC+TGG 0.173881 1_4:-55868842 Msa0171230:CDS
ACGTGGTTCGCCTCTATTTA+TGG 0.180896 1_4:-55868609 Msa0171230:intron
CCGGCCATTATTATTCATTT+TGG 0.192280 1_4:-55866254 Msa0171230:three_prime_UTR
ACCCTAGGTGATCGATTATT+TGG 0.199603 1_4:-55866554 Msa0171230:exon
GAGATATGCAGACGAGTTTA+AGG 0.201979 1_4:-55873907 Msa0171230:CDS
TAGAAAATAAAATTAGAAAA+AGG 0.211399 1_4:-55866389 Msa0171230:three_prime_UTR
CCCCTTAATCAAACCTGATT+TGG 0.215749 1_4:+55878278 None:intergenic
AATGTTTCCAAGGTAAATTC+TGG 0.245334 1_4:+55873933 None:intergenic
CTTCGTCCAACCTTAGTCTT+TGG 0.257535 1_4:-55866462 Msa0171230:three_prime_UTR
GAATAAAGTCCCCAGGGTTT+TGG 0.264163 1_4:+55872066 None:intergenic
GCCCAAATCAGGTTTGATTA+AGG 0.270581 1_4:-55878280 Msa0171230:CDS
ACACTTCGGATAATCTAAAA+TGG 0.273299 1_4:-55871824 Msa0171230:CDS
GATCTGGAAACTGGGAGTTT+TGG 0.275624 1_4:-55873624 Msa0171230:CDS
CATCCTGCTGGCAGCCTTGA+TGG 0.277204 1_4:-55867816 Msa0171230:CDS
CTACTGAGATATAAGAAGTT+AGG 0.295203 1_4:+55869809 None:intergenic
TATAATTCAATGAATATAAA+TGG 0.296555 1_4:+55872602 None:intergenic
TACAATGAGTTCAATTCTTC+CGG 0.298568 1_4:+55866661 None:intergenic
CCAAAGGTGTGCCAGTTTAT+AGG 0.298758 1_4:-55872094 Msa0171230:CDS
GAATTTGCTTGATCCACTAT+TGG 0.299776 1_4:+55869688 None:intergenic
TTCATTGAATTATATGCATC+TGG 0.305508 1_4:-55872593 Msa0171230:CDS
CCAACCTTCCAGCACTATTA+AGG 0.311202 1_4:-55869035 Msa0171230:CDS
GTCGAGTTTGTCATGAATAC+TGG 0.316021 1_4:-55866831 Msa0171230:CDS
CCCTTAATCAAACCTGATTT+GGG 0.321911 1_4:+55878279 None:intergenic
GCTGGCCAGACCAGTGTAAA+TGG 0.326405 1_4:-55866775 Msa0171230:CDS
GTGGTTCCTCATATGCTTGC+TGG 0.327847 1_4:-55869376 Msa0171230:CDS
ACTTCACAAAATCCTGCATT+AGG 0.330109 1_4:+55873981 None:intergenic
AATTAAGTGCAGTTTATAGA+TGG 0.330862 1_4:-55869855 Msa0171230:CDS
TGCAAAAGATGCATGCAAAT+TGG 0.331245 1_4:-55872542 Msa0171230:CDS
CTTAATAGTGCTGGAAGGTT+GGG 0.335439 1_4:+55869036 None:intergenic
CCTTTCTGACGGGAATTGTT+TGG 0.341322 1_4:+55868917 None:intergenic
AATGTTGAGCCTTTGGAATT+TGG 0.347465 1_4:-55868857 Msa0171230:CDS
TACGAGCAGTACATAAAATC+TGG 0.350384 1_4:-55873561 Msa0171230:CDS
TATGGAGCTGATCTGGAAAC+TGG 0.355790 1_4:-55873633 Msa0171230:CDS
TGTGGTCTACGAGCATCTTC+TGG 0.356321 1_4:+55874435 None:intergenic
CCTTTGCATGAGGTCATTGA+TGG 0.356999 1_4:-55875332 Msa0171230:CDS
CAACTGCAATGTTGAGCCTT+TGG 0.357071 1_4:-55868864 Msa0171230:CDS
CCGACTCGTCTCATTCTTCC+AGG 0.358823 1_4:-55869747 Msa0171230:CDS
TTGATGAGGGAAGTTGGGCT+TGG 0.359288 1_4:-55878302 Msa0171230:CDS
CTTGATGGCATCGAAATGTT+TGG 0.361417 1_4:-55867801 Msa0171230:CDS
AGCAACAAAATGCTGGGATA+TGG 0.363018 1_4:-55867907 Msa0171230:CDS
TTTCTCTATAACCTCCATTC+AGG 0.363260 1_4:+55866426 None:intergenic
GCGGTGCTTCGTGAAGATTC+AGG 0.363884 1_4:-55869256 Msa0171230:CDS
CCCAAATCAGGTTTGATTAA+GGG 0.368167 1_4:-55878279 Msa0171230:CDS
CTAAGAAGTATGATATCTTT+AGG 0.371235 1_4:+55869448 None:intergenic
TGAACCAAAATGAATAATAA+TGG 0.372299 1_4:+55866250 None:intergenic
ACTGGGGTAGAAGGTATAAT+TGG 0.374779 1_4:+55869178 None:intergenic
TATGAAACCAGTGATATATC+TGG 0.375280 1_4:-55873492 Msa0171230:CDS
CGGGTTTGATGAGGGAAGTT+GGG 0.376351 1_4:-55878307 Msa0171230:CDS
GAGGTTATAGAGAAAGAAAA+AGG 0.376925 1_4:-55866418 Msa0171230:three_prime_UTR
AAAGTCATGGTGCAGCATTC+AGG 0.377547 1_4:-55868819 Msa0171230:CDS
CCTTTGGACTTAAGAATAGA+AGG 0.379081 1_4:+55872110 None:intergenic
CATCCTCTGAGGACTCCTTT+AGG 0.379777 1_4:+55874858 None:intergenic
TTTGTGAAGTTGAAACATTT+GGG 0.380131 1_4:-55873968 Msa0171230:CDS
AGTTGGGCTTGGCCCAAATC+AGG 0.381899 1_4:-55878291 Msa0171230:CDS
TTCGTCCAACCTTAGTCTTT+GGG 0.384099 1_4:-55866461 Msa0171230:three_prime_UTR
GAAAGATCTACTGGGGTAGA+AGG 0.389159 1_4:+55869169 None:intergenic
CCTTTGCACTATCACTCAAT+TGG 0.389769 1_4:+55875116 None:intergenic
CCTATAAACTGGCACACCTT+TGG 0.390004 1_4:+55872094 None:intergenic
GTTCTCCACAGAAGGCTCTA+AGG 0.393810 1_4:+55873821 None:intergenic
GACTCTGAGATAAGAGAAAC+CGG 0.394344 1_4:-55878327 Msa0171230:CDS
AGCAATTGTGTTCATGCTCT+TGG 0.396351 1_4:-55869948 Msa0171230:CDS
ATTTCAGAAATTCTTGATGC+TGG 0.398808 1_4:-55868632 Msa0171230:CDS
GATAATCATGAGAGGTTTGA+TGG 0.404141 1_4:-55869001 Msa0171230:CDS
GGTGGGTGTGTGCTGATTCA+TGG 0.407700 1_4:+55866726 None:intergenic
GGTGGAGGTGGAAGTGATCA+AGG 0.407845 1_4:-55866754 Msa0171230:CDS
GGTGCTTTATGGAGCTGATC+TGG 0.412536 1_4:-55873640 Msa0171230:CDS
CTCATGATAAGCTATTGCTT+GGG 0.417910 1_4:-55871899 Msa0171230:CDS
TCTTGATTGAATTCACAAAC+AGG 0.420350 1_4:+55869538 None:intergenic
CGCTCCAGAGCTGAACCATA+TGG 0.422499 1_4:-55874221 Msa0171230:CDS
TTGTACAGGGAAGACGAATC+AGG 0.423546 1_4:-55875372 Msa0171230:intron
CCGGGTTTGATGAGGGAAGT+TGG 0.424987 1_4:-55878308 Msa0171230:CDS
CAGTTTAAGCTGGGAAGAAA+AGG 0.426603 1_4:-55867852 Msa0171230:CDS
ATATGAAAAGAAAGATCTAC+TGG 0.426723 1_4:+55869160 None:intergenic
TTGTGGAAAAGACGGTCTTT+TGG 0.428369 1_4:-55871793 Msa0171230:CDS
ATCGATCACCTAGGGTGGTT+GGG 0.430189 1_4:+55866561 None:intergenic
CAGTCAACTCAGGTTGGAAA+TGG 0.432685 1_4:-55875142 Msa0171230:CDS
AAATATTCTTGTTGAGGCAT+TGG 0.435779 1_4:-55869884 Msa0171230:CDS
CAAGGGCAGCTTTCACAAGC+TGG 0.435829 1_4:-55866793 Msa0171230:CDS
CACAGATAGATATGCTTGCT+TGG 0.436336 1_4:-55869980 Msa0171230:CDS
CCTTAATAGTGCTGGAAGGT+TGG 0.436594 1_4:+55869035 None:intergenic
TCTTCAGTGGGGTAGAAAAC+AGG 0.437666 1_4:+55874399 None:intergenic
ACAAGAATGGGAGTGGATAA+TGG 0.438444 1_4:-55874017 Msa0171230:CDS
TTTCTTTAATCAGGCTATTG+AGG 0.440771 1_4:-55866866 Msa0171230:intron
TTAATGTAGCTCCCGTTGAC+TGG 0.442935 1_4:-55871983 Msa0171230:CDS
AATAACTTTGCAAGGTTACC+AGG 0.445094 1_4:-55873528 Msa0171230:CDS
CTCATTATTCACATTGCTCC+TGG 0.445885 1_4:+55869729 None:intergenic
CTCGTATTGCAAAGGTTGTC+CGG 0.447988 1_4:-55868892 Msa0171230:CDS
GATAGCAAAACAGTTTAAGC+TGG 0.448678 1_4:-55867862 Msa0171230:CDS
GGGACTTCCGTCGGCCTCAA+GGG 0.449299 1_4:-55866810 Msa0171230:CDS
TCGGGCAGGTCATTGCTAGA+TGG 0.451167 1_4:-55874461 Msa0171230:intron
TTATTTAAAGTGACAGTGTT+TGG 0.453216 1_4:-55866335 Msa0171230:three_prime_UTR
ATGTTTCCAAGGTAAATTCT+GGG 0.454986 1_4:+55873934 None:intergenic
ACAGGAGCATTCTCAATTTG+TGG 0.457135 1_4:+55874417 None:intergenic
TACTGAGATATAAGAAGTTA+GGG 0.459115 1_4:+55869810 None:intergenic
TTAATAGTGCTGGAAGGTTG+GGG 0.459758 1_4:+55869037 None:intergenic
GACAATGCAAGAGCTGTTAA+CGG 0.461353 1_4:-55868956 Msa0171230:CDS
CGCTAATATCATAACGAAAG+AGG 0.463912 1_4:+55869911 None:intergenic
CTCCACCATTTACACTGGTC+TGG 0.464172 1_4:+55866770 None:intergenic
TGATGGGGACCGAGCTTATG+AGG 0.464713 1_4:-55875315 Msa0171230:CDS
AGATGTCAGATTCAAATAGA+AGG 0.468081 1_4:-55869402 Msa0171230:CDS
ATTGGGATCTGTTCAGCCGC+TGG 0.469647 1_4:+55866616 None:intergenic
CTTCCTCCTTTACATCCTGC+TGG 0.470384 1_4:-55867828 Msa0171230:CDS
GAAACATTTGGGTTTGAACC+TGG 0.471947 1_4:-55873957 Msa0171230:CDS
GTGACAGATGCTTCTGTGAC+GGG 0.472904 1_4:-55869295 Msa0171230:CDS
TTTCCTCGAGCCTACCACTC+TGG 0.473140 1_4:-55872038 Msa0171230:CDS
GTTCTTAGCCTTAATAGTGC+TGG 0.474222 1_4:+55869027 None:intergenic
CTAGAACCAGCAAGCATATG+AGG 0.475030 1_4:+55869370 None:intergenic
ACCAGCTTATGAAGCAAGTC+AGG 0.476038 1_4:+55872475 None:intergenic
AAGGAGAAGATGCACAAGAA+TGG 0.478896 1_4:-55874030 Msa0171230:CDS
TTAAAGTGACAGTGTTTGGA+TGG 0.479784 1_4:-55866331 Msa0171230:three_prime_UTR
ATATGTCAGCAACAAAATGC+TGG 0.483599 1_4:-55867914 Msa0171230:CDS
TATAGAGCTGTACCGGGAGC+AGG 0.483687 1_4:-55871940 Msa0171230:CDS
TCCAAGGTAAATTCTGGGCC+AGG 0.485498 1_4:+55873939 None:intergenic
AACCGCTATCGCACTTTCCA+TGG 0.488021 1_4:+55875059 None:intergenic
TCCCTAGGCACGTGTTGAGA+TGG 0.488807 1_4:-55870139 Msa0171230:intron
TGGGACTTCCGTCGGCCTCA+AGG 0.488914 1_4:-55866811 Msa0171230:CDS
GATGCTGCATTCCCTTTCAC+TGG 0.491538 1_4:+55870047 None:intergenic
CCATGTGGAAGCCAGTCAAC+GGG 0.493014 1_4:+55871972 None:intergenic
AGCTATTGCTTGGGGCTGCT+AGG 0.493060 1_4:-55871890 Msa0171230:CDS
ACAATACGGCAGATTCCATA+TGG 0.494785 1_4:+55874206 None:intergenic
TACCACTCTGGGTTCAATTG+TGG 0.495819 1_4:-55872026 Msa0171230:CDS
AAAATAATATGAAAAGGAAA+AGG 0.496493 1_4:-55874049 Msa0171230:CDS
TTCCTCGAGCCTACCACTCT+GGG 0.496688 1_4:-55872037 Msa0171230:CDS
ACCTGACTTGCTTCATAAGC+TGG 0.496715 1_4:-55872476 Msa0171230:intron
AGAACATTGAGGGTGAATAC+TGG 0.497381 1_4:-55873803 Msa0171230:CDS
CGGCGGTGATAAAGCATATG+AGG 0.497390 1_4:+55869510 None:intergenic
CTTTGCATGAGGTCATTGAT+GGG 0.497772 1_4:-55875331 Msa0171230:CDS
AGGAGAAGATGCACAAGAAT+GGG 0.499164 1_4:-55874029 Msa0171230:CDS
CCAAATCAGGTTTGATTAAG+GGG 0.500644 1_4:-55878278 Msa0171230:CDS
AATCGATCACCTAGGGTGGT+TGG 0.501638 1_4:+55866560 None:intergenic
GGAATTTAAATAACTTTGCA+AGG 0.501860 1_4:-55873536 Msa0171230:CDS
GATGGGCAAAATTAGACCTT+GGG 0.502818 1_4:-55869837 Msa0171230:CDS
TCTCATGATAAGCTATTGCT+TGG 0.503200 1_4:-55871900 Msa0171230:CDS
ATTAAGTGCAGTTTATAGAT+GGG 0.503880 1_4:-55869854 Msa0171230:CDS
CTAAAATGGAAAGATGTTTG+TGG 0.503920 1_4:-55871810 Msa0171230:CDS
GCTATTGCTTGGGGCTGCTA+GGG 0.503959 1_4:-55871889 Msa0171230:CDS
ATATTGCTATAGAGCTGTAC+CGG 0.504818 1_4:-55871947 Msa0171230:CDS
TAATCCATCTTCTTCGTCGA+AGG 0.506262 1_4:+55875083 None:intergenic
GCATCCGCTCTTGTAGAAGC+TGG 0.507863 1_4:+55869103 None:intergenic
CAGTACTGCAACAGCTCCGG+TGG 0.508016 1_4:+55866708 None:intergenic
AGCCATCTCACACGTAGGTA+TGG 0.509185 1_4:+55869621 None:intergenic
AGATGGGCAAAATTAGACCT+TGG 0.509421 1_4:-55869838 Msa0171230:CDS
TTTGACAGATGTTCCAATAG+TGG 0.510658 1_4:-55869701 Msa0171230:CDS
TGCTTATTGCCCTTTGCATG+AGG 0.511863 1_4:-55875342 Msa0171230:CDS
TCTATAACCTCCATTCAGGC+GGG 0.512309 1_4:+55866430 None:intergenic
ATTTCTCTGCAGTTCTTCAA+AGG 0.513564 1_4:-55870100 Msa0171230:CDS
ACCAGTGTAAATGGTGGAGG+TGG 0.513681 1_4:-55866766 Msa0171230:CDS
GATCCCTTCGACGAAGAAGA+TGG 0.514849 1_4:-55875087 Msa0171230:CDS
GGTGAAAGTACCATAAATAG+AGG 0.514863 1_4:+55868599 None:intergenic
GATTCCATATGGTTCAGCTC+TGG 0.515067 1_4:+55874217 None:intergenic
AGTGACAGGCAGCAGCAGAT+AGG 0.515405 1_4:+55870007 None:intergenic
ATATGAATGAAAACCTCCCT+TGG 0.515694 1_4:+55867933 None:intergenic
CTCTATAACCTCCATTCAGG+CGG 0.517340 1_4:+55866429 None:intergenic
TCATAAGAGAGCAGAGATCC+TGG 0.517816 1_4:+55873510 None:intergenic
CTTCAGTACTGCAACAGCTC+CGG 0.518315 1_4:+55866705 None:intergenic
GTCACAGAAGCATCTGTCAC+AGG 0.518594 1_4:+55869298 None:intergenic
TGAGATGGAGCGGGTAAGAA+GGG 0.519970 1_4:-55870124 Msa0171230:CDS
TTGAGATGGAGCGGGTAAGA+AGG 0.520449 1_4:-55870125 Msa0171230:CDS
CATCAATGACCTCATGCAAA+GGG 0.522361 1_4:+55875333 None:intergenic
ACCTGGCCCAGAATTTACCT+TGG 0.522610 1_4:-55873940 Msa0171230:CDS
ATGGGAGTGGATAATGGCAC+TGG 0.522790 1_4:-55874011 Msa0171230:CDS
CGAACTAAATATTCTTGTTG+AGG 0.522912 1_4:-55869890 Msa0171230:CDS
AGGCTGCCAGCAGGATGTAA+AGG 0.525653 1_4:+55867822 None:intergenic
GAAATTCTTGATGCTGGACG+TGG 0.526135 1_4:-55868626 Msa0171230:CDS
AAAGTTTCAAAGCGTCACTT+TGG 0.528451 1_4:-55866308 Msa0171230:three_prime_UTR
CCTTCTATTCTTAAGTCCAA+AGG 0.529594 1_4:-55872110 Msa0171230:CDS
GGATTCAAAATAATATGAAA+AGG 0.530544 1_4:-55874055 Msa0171230:CDS
TCAGCAAAGTAATCTCCCAC+TGG 0.533185 1_4:+55871853 None:intergenic
AAGTCTTACGCCCCTGCTCC+CGG 0.533537 1_4:+55871928 None:intergenic
CCCTCAATGTTCTCCACAGA+AGG 0.534758 1_4:+55873813 None:intergenic
GTGGAGGTGGAAGTGATCAA+GGG 0.537026 1_4:-55866753 Msa0171230:CDS
ATTCTTGTTGAGGCATTGGA+AGG 0.540387 1_4:-55869880 Msa0171230:CDS
GGCAAAATTAGACCTTGGGC+TGG 0.540388 1_4:-55869833 Msa0171230:CDS
TCGAGACCTTGTCTTCCTAA+AGG 0.541010 1_4:-55874873 Msa0171230:CDS
TCAAAACCCGGTGGAACTGA+CGG 0.542029 1_4:+55875265 None:intergenic
CCTTCTGTGGAGAACATTGA+GGG 0.542353 1_4:-55873813 Msa0171230:CDS
TATAGGTGTGTCCAAAACCC+TGG 0.542698 1_4:-55872077 Msa0171230:CDS
ATTCTGAAAGGCAAGGCTAC+CGG 0.543318 1_4:-55866273 Msa0171230:three_prime_UTR
AAAATTGCTGTATTAGCACT+TGG 0.543740 1_4:+55873852 None:intergenic
GTGGGTGTGTGCTGATTCAT+GGG 0.544169 1_4:+55866727 None:intergenic
GTGACCTCAATTTCTTCAGT+AGG 0.545384 1_4:+55873765 None:intergenic
GAATCACAGTCAACTCAGGT+TGG 0.545907 1_4:-55875148 Msa0171230:CDS
ATGCCATCAAGGCTGCCAGC+AGG 0.547470 1_4:+55867813 None:intergenic
TCCAAATAATCGATCACCTA+GGG 0.547893 1_4:+55866553 None:intergenic
ATAGGTGTGTCCAAAACCCT+GGG 0.549131 1_4:-55872076 Msa0171230:CDS
ATAGAGCTGTACCGGGAGCA+GGG 0.549215 1_4:-55871939 Msa0171230:CDS
ATCAGGTTTGATTAAGGGGA+GGG 0.549312 1_4:-55878274 Msa0171230:intron
TTCAGGTAACTGCTTTCTCA+TGG 0.551566 1_4:+55872513 None:intergenic
TGTCCTTACCCAACAAAATG+AGG 0.552174 1_4:+55873431 None:intergenic
GTAGTGCCATGGTTGTATAT+AGG 0.552380 1_4:-55873465 Msa0171230:CDS
CCAAAATGAATAATAATGGC+CGG 0.552514 1_4:+55866254 None:intergenic
GGAAGCAGTACGAGCCCAGT+GGG 0.554824 1_4:-55871868 Msa0171230:CDS
CCAAACAATTCCCGTCAGAA+AGG 0.556450 1_4:-55868917 Msa0171230:CDS
CCCGTTGACTGGCTTCCACA+TGG 0.556697 1_4:-55871972 Msa0171230:CDS
CTCCATACCTACGTGTGAGA+TGG 0.557699 1_4:-55869623 Msa0171230:CDS
AGCAAATTCTGCAAATAGCA+AGG 0.558046 1_4:-55869674 Msa0171230:CDS
TCACAAAACCCAACCACCCT+AGG 0.559107 1_4:-55866569 Msa0171230:exon
TGTGACAGATGCTTCTGTGA+CGG 0.559586 1_4:-55869296 Msa0171230:CDS
TATAACCTCCATTCAGGCGG+GGG 0.560107 1_4:+55866432 None:intergenic
TCATTGAATTATATGCATCT+GGG 0.560710 1_4:-55872592 Msa0171230:CDS
AATGTTAGAATAAAGTCCCC+AGG 0.560998 1_4:+55872059 None:intergenic
TAACTAATTAAATCCAACAT+AGG 0.561731 1_4:+55866163 None:intergenic
AGATGCATGCAAATTGGAAG+AGG 0.562156 1_4:-55872536 Msa0171230:CDS
TATGTCAGCAACAAAATGCT+GGG 0.562554 1_4:-55867913 Msa0171230:CDS
AAGATGCACAAGAATGGGAG+TGG 0.562719 1_4:-55874024 Msa0171230:CDS
AATTCACAAACAGGGACACT+CGG 0.563265 1_4:+55869547 None:intergenic
GAAACTTGACTAGACTTGCT+AGG 0.565216 1_4:+55873591 None:intergenic
TGTTTGTGAATTCAATCAAG+AGG 0.565218 1_4:-55869536 Msa0171230:CDS
CTATAACCTCCATTCAGGCG+GGG 0.566019 1_4:+55866431 None:intergenic
ATATCTCTTAAATGTTTCCA+AGG 0.567445 1_4:+55873923 None:intergenic
TACATCTTTCGCACTGAAGA+GGG 0.567635 1_4:-55875236 Msa0171230:CDS
CAACATTGCAGTTGATGCGC+CGG 0.567962 1_4:+55868873 None:intergenic
AACACATATCCTCATAAGCT+CGG 0.567984 1_4:+55875306 None:intergenic
ATAGCAAAACAGTTTAAGCT+GGG 0.568094 1_4:-55867861 Msa0171230:CDS
AATCCATCTTCTTCGTCGAA+GGG 0.569125 1_4:+55875084 None:intergenic
CATTCAGGCTATATTTCCAA+AGG 0.569460 1_4:-55868804 Msa0171230:CDS
GAGTCCTACTGAAGAAATTG+AGG 0.569540 1_4:-55873769 Msa0171230:intron
TAATAGTGCTGGAAGGTTGG+GGG 0.571266 1_4:+55869038 None:intergenic
CCAACTTCCCTCATCAAACC+CGG 0.572060 1_4:+55878308 None:intergenic
AAACTTCAGAATCGTAACTC+AGG 0.572137 1_4:-55874092 Msa0171230:CDS
GGGAAGCAGTACGAGCCCAG+TGG 0.572739 1_4:-55871869 Msa0171230:CDS
CCATCAATGACCTCATGCAA+AGG 0.572971 1_4:+55875332 None:intergenic
CAAACATTTCGATGCCATCA+AGG 0.573152 1_4:+55867802 None:intergenic
TTTCCTTGGAAAATAATCCA+AGG 0.574213 1_4:-55867950 Msa0171230:CDS
TGTAAATTGTAGTTCATCTG+AGG 0.576556 1_4:-55866497 Msa0171230:three_prime_UTR
CAATACGAGGACCTTTCTGA+CGG 0.576853 1_4:+55868906 None:intergenic
AGATTGCCGTAATTGCCAAA+AGG 0.576897 1_4:-55874832 Msa0171230:intron
AAGAGAAACCGGGTTTGATG+AGG 0.577566 1_4:-55878316 Msa0171230:CDS
AAAGCTGCCCTTGAGGCCGA+CGG 0.577930 1_4:+55866803 None:intergenic
TGGACTCTAGGTGCCTATGT+TGG 0.578284 1_4:-55866176 Msa0171230:three_prime_UTR
TTGTGCTTTCTGGAAAGTCA+TGG 0.580340 1_4:-55868832 Msa0171230:CDS
ACGAGCAGTACATAAAATCT+GGG 0.580564 1_4:-55873560 Msa0171230:CDS
TCCATGTGGAAGCCAGTCAA+CGG 0.581948 1_4:+55871971 None:intergenic
TCCACCTCCACCATTTACAC+TGG 0.582141 1_4:+55866765 None:intergenic
CGAAGAAGATGGATTAACCA+TGG 0.582944 1_4:-55875076 Msa0171230:CDS
ACAATTGAACCCAGAGTGGT+AGG 0.583128 1_4:+55872028 None:intergenic
ATGAATCAGCACACACCCAC+CGG 0.584252 1_4:-55866724 Msa0171230:CDS
ATTCAGGCTATATTTCCAAA+GGG 0.585259 1_4:-55868803 Msa0171230:intron
ATTGTCTGCTACATTAGAAG+TGG 0.585964 1_4:+55868973 None:intergenic
TTAGCCTTAATAGTGCTGGA+AGG 0.587065 1_4:+55869031 None:intergenic
CAGGAGCAATGTGAATAATG+AGG 0.587090 1_4:-55869728 Msa0171230:CDS
ATACATCTTTCGCACTGAAG+AGG 0.587392 1_4:-55875237 Msa0171230:CDS
ATCTGAATCACAGTCAACTC+AGG 0.588426 1_4:-55875152 Msa0171230:CDS
TGCTTCTGTGACGGGTGAGA+AGG 0.589664 1_4:-55869287 Msa0171230:CDS
TCGAGTTTGTCATGAATACT+GGG 0.589756 1_4:-55866830 Msa0171230:CDS
TCTATCTGTGAAACAGTGAC+AGG 0.589876 1_4:+55869993 None:intergenic
GTCAGATTCAAATAGAAGGA+AGG 0.590620 1_4:-55869398 Msa0171230:CDS
AATTCGCTACTCGTGTTCAG+AGG 0.591578 1_4:-55874121 Msa0171230:CDS
TTCTTCACCAGAAATAGTGA+AGG 0.593991 1_4:-55867775 Msa0171230:intron
TTTGCATGAGGTCATTGATG+GGG 0.595739 1_4:-55875330 Msa0171230:CDS
ATATAGTAACATGTACTGCA+TGG 0.596328 1_4:+55868653 None:intergenic
TTCCTTGGAAAATAATCCAA+GGG 0.597322 1_4:-55867949 Msa0171230:CDS
ATGAATACTGGGACTTCCGT+CGG 0.597512 1_4:-55866819 Msa0171230:CDS
GCTTGTGAAAGCTGCCCTTG+AGG 0.598677 1_4:+55866796 None:intergenic
TATCTTCTATATCACTACAC+AGG 0.598796 1_4:+55869335 None:intergenic
CTTGGAAAATAATCCAAGGG+AGG 0.599181 1_4:-55867946 Msa0171230:CDS
TATCTGGTGTTGTAGTGCCA+TGG 0.599195 1_4:-55873476 Msa0171230:CDS
CCAATTGAGTGATAGTGCAA+AGG 0.601500 1_4:-55875116 Msa0171230:CDS
CTGCCAGCAGGATGTAAAGG+AGG 0.603312 1_4:+55867825 None:intergenic
AGAGAAACCGGGTTTGATGA+GGG 0.606699 1_4:-55878315 Msa0171230:CDS
TACAACACCAGATATATCAC+TGG 0.607854 1_4:+55873485 None:intergenic
AAGAGCGAGACCTCTTCAGT+GGG 0.608555 1_4:+55874387 None:intergenic
GGCACGTGTTGAGATGGAGC+GGG 0.608670 1_4:-55870133 Msa0171230:CDS
TCATGAAATTCTGAAAGGCA+AGG 0.609387 1_4:-55866280 Msa0171230:three_prime_UTR
TTGTGGCTTCAACTGTGCTG+AGG 0.610989 1_4:-55872009 Msa0171230:CDS
TCATGATAAGCTATTGCTTG+GGG 0.611636 1_4:-55871898 Msa0171230:CDS
CAGCAGGATGTAAAGGAGGA+AGG 0.611904 1_4:+55867829 None:intergenic
AGAAGCATCTGTCACAGGGA+TGG 0.613181 1_4:+55869303 None:intergenic
CCTGGAAGAATGAGACGAGT+CGG 0.613416 1_4:+55869747 None:intergenic
GCCTTCTGTGGAGAACATTG+AGG 0.614923 1_4:-55873814 Msa0171230:CDS
TTGCCTCATGAAATTCTGAA+AGG 0.615001 1_4:-55866285 Msa0171230:three_prime_UTR
CAGCAAAGTAATCTCCCACT+GGG 0.615095 1_4:+55871854 None:intergenic
AGATGCACTTGTCGTCGTCG+AGG 0.617027 1_4:+55875171 None:intergenic
AACCATGGAAAGTGCGATAG+CGG 0.617465 1_4:-55875061 Msa0171230:CDS
TCACAGAAGCATCTGTCACA+GGG 0.618605 1_4:+55869299 None:intergenic
GATGTATATGACTCAAAACC+CGG 0.620565 1_4:+55875253 None:intergenic
CGATTAGCCATCTCACACGT+AGG 0.621187 1_4:+55869616 None:intergenic
AAAGATGTTTGTGGAAAAGA+CGG 0.621650 1_4:-55871801 Msa0171230:CDS
AATACGAGGACCTTTCTGAC+GGG 0.621688 1_4:+55868907 None:intergenic
TATGAAAAGAAAGATCTACT+GGG 0.623133 1_4:+55869161 None:intergenic
TGGTACCTTAGAGCCTTCTG+TGG 0.624238 1_4:-55873826 Msa0171230:CDS
AACTTCAGAATCGTAACTCA+GGG 0.624826 1_4:-55874091 Msa0171230:CDS
CACTATTAAGGCTAAGAACG+AGG 0.625779 1_4:-55869023 Msa0171230:CDS
TAGAGCTGTACCGGGAGCAG+GGG 0.626804 1_4:-55871938 Msa0171230:CDS
CTTGATTGAATTCACAAACA+GGG 0.626972 1_4:+55869539 None:intergenic
ACTGGAACAGAACCTAATGC+AGG 0.626995 1_4:-55873993 Msa0171230:CDS
AATCAGGTTTGATTAAGGGG+AGG 0.627244 1_4:-55878275 Msa0171230:CDS
ATGGAGCTGATCTGGAAACT+GGG 0.628046 1_4:-55873632 Msa0171230:CDS
ACTCAGGGACAAAGAAGTCA+AGG 0.628732 1_4:-55874076 Msa0171230:CDS
AACCCAGAGTGGTAGGCTCG+AGG 0.628756 1_4:+55872035 None:intergenic
CAAGAGCGAGACCTCTTCAG+TGG 0.630677 1_4:+55874386 None:intergenic
GAAAGGTCCTCGTATTGCAA+AGG 0.632795 1_4:-55868900 Msa0171230:CDS
CAGACCAGTGTAAATGGTGG+AGG 0.632859 1_4:-55866769 Msa0171230:CDS
AGCACAACTCCAAATTCCAA+AGG 0.636931 1_4:+55868848 None:intergenic
TCATCTCCGTGTTGAGCTAG+CGG 0.637957 1_4:+55869490 None:intergenic
CGGACAACCTTTGCAATACG+AGG 0.638052 1_4:+55868893 None:intergenic
AAAGTGCGATAGCGGTTCAG+AGG 0.639762 1_4:-55875053 Msa0171230:CDS
CACATTCCTATATACAACCA+TGG 0.639807 1_4:+55873459 None:intergenic
TTGCCTTTCAGAATTTCATG+AGG 0.640614 1_4:+55866282 None:intergenic
TTTAGGAAGACAAGGTCTCG+AGG 0.642351 1_4:+55874875 None:intergenic
GTCCAAATAATCGATCACCT+AGG 0.648766 1_4:+55866552 None:intergenic
GGCCAGACCAGTGTAAATGG+TGG 0.649543 1_4:-55866772 Msa0171230:CDS
AGGAAGACGCTGATTGTGAG+CGG 0.649584 1_4:-55875033 Msa0171230:CDS
ATGTTAGAATAAAGTCCCCA+GGG 0.650078 1_4:+55872060 None:intergenic
GGGTGAGAAGGATGCTATTG+CGG 0.650154 1_4:-55869275 Msa0171230:CDS
CATTCCAGCTTCTACAAGAG+CGG 0.652805 1_4:-55869107 Msa0171230:CDS
AGTACTGCAACAGCTCCGGT+GGG 0.653516 1_4:+55866709 None:intergenic
AGGACTCCTTTAGGAAGACA+AGG 0.655074 1_4:+55874867 None:intergenic
TATTGCTATAGAGCTGTACC+GGG 0.656325 1_4:-55871946 Msa0171230:CDS
AAGAAGTTAGGGCCAGCCCA+AGG 0.657435 1_4:+55869821 None:intergenic
TCTACAAGAGCGGATGCCAG+CGG 0.657634 1_4:-55869097 Msa0171230:CDS
AGGCACGTGTTGAGATGGAG+CGG 0.659804 1_4:-55870134 Msa0171230:CDS
AAATAATCGATCACCTAGGG+TGG 0.660486 1_4:+55866556 None:intergenic
AGATATTTATGTATCGAACA+CGG 0.665293 1_4:+55868681 None:intergenic
GTCGTCGTCGAGGAACTCGT+CGG 0.668539 1_4:+55875181 None:intergenic
AGATTCAAATAGAAGGAAGG+TGG 0.669361 1_4:-55869395 Msa0171230:CDS
CTTCCTAAAGGAGTCCTCAG+AGG 0.671328 1_4:-55874861 Msa0171230:CDS
GGCAATCTGGACATCCTCTG+AGG 0.675158 1_4:+55874847 None:intergenic
GAGCAATGTGAATAATGAGG+CGG 0.679381 1_4:-55869725 Msa0171230:CDS
AGCAGTACATAAAATCTGGG+TGG 0.681653 1_4:-55873557 Msa0171230:CDS
TGGAGGTGGAAGTGATCAAG+GGG 0.683131 1_4:-55866752 Msa0171230:CDS
ATGAAAAGAAAGATCTACTG+GGG 0.686955 1_4:+55869162 None:intergenic
TCTCCGTGTTGAGCTAGCGG+CGG 0.687733 1_4:+55869493 None:intergenic
ACATTGAGGGTGAATACTGG+CGG 0.689031 1_4:-55873800 Msa0171230:CDS
TCACCGCCGCTAGCTCAACA+CGG 0.689367 1_4:-55869496 Msa0171230:CDS
AGAACGAGGATAATCATGAG+AGG 0.690743 1_4:-55869009 Msa0171230:CDS
GTTAACGGAAACATCTCTTG+TGG 0.691193 1_4:-55868941 Msa0171230:CDS
TGAGGGTGAATACTGGCGGA+TGG 0.693563 1_4:-55873796 Msa0171230:CDS
AGCCACAATTGAACCCAGAG+TGG 0.697023 1_4:+55872024 None:intergenic
ACTCTGAGATAAGAGAAACC+GGG 0.718637 1_4:-55878326 Msa0171230:CDS
TCTTACTGACAATAAGCCAG+CGG 0.719232 1_4:-55866632 Msa0171230:CDS
GTATATGACTCAAAACCCGG+TGG 0.733791 1_4:+55875256 None:intergenic
TCTATAGCAATATGTCCATG+TGG 0.743255 1_4:+55871957 None:intergenic
TTACTGGTGCAGAATCAGCG+AGG 0.757137 1_4:-55869132 Msa0171230:CDS
TAGGTGTGTCCAAAACCCTG+GGG 0.771641 1_4:-55872075 Msa0171230:CDS
AGAGCGAGACCTCTTCAGTG+GGG 0.777129 1_4:+55874388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTATAAAAATTAATT+AGG - chr1_4:55877142-55877161 Msa0171230:intron 0.0%
!!! TGAATTTTTTTTTTGTTTTT+TGG + chr1_4:55866894-55866913 None:intergenic 10.0%
!!! TCTGTTATTTTTTATTTTTT+TGG - chr1_4:55868571-55868590 Msa0171230:intron 10.0%
!! TATAATTCAATGAATATAAA+TGG + chr1_4:55871861-55871880 None:intergenic 10.0%
!! TAGAAAATAAAATTAGAAAA+AGG - chr1_4:55878071-55878090 Msa0171230:intron 10.0%
!! AGAAAATAAAATTAGAAAAA+GGG - chr1_4:55878072-55878091 Msa0171230:intron 10.0%
!! TAAATAAGCAAAAAATTAAA+GGG + chr1_4:55878112-55878131 None:intergenic 10.0%
!! TTAAATAAGCAAAAAATTAA+AGG + chr1_4:55878113-55878132 None:intergenic 10.0%
!!! AATTTTTGAGATATATTTGA+GGG + chr1_4:55866329-55866348 None:intergenic 15.0%
!!! AAATTTTTGAGATATATTTG+AGG + chr1_4:55866330-55866349 None:intergenic 15.0%
!!! TTTTTAGGTTTTTAGAAATT+TGG + chr1_4:55867075-55867094 None:intergenic 15.0%
!!! TGGTCAAATTATTAATTTTA+GGG + chr1_4:55868033-55868052 None:intergenic 15.0%
!!! TTGGTCAAATTATTAATTTT+AGG + chr1_4:55868034-55868053 None:intergenic 15.0%
!!! TTTTTTTCTTTCTTTTGTTT+TGG + chr1_4:55868053-55868072 None:intergenic 15.0%
!! AAAAATTCACATTAATTTAG+AGG - chr1_4:55868071-55868090 Msa0171230:intron 15.0%
!!! GTAATATTATTGACTAATTA+AGG - chr1_4:55868400-55868419 Msa0171230:intron 15.0%
!!! TATTATTGTTATTATTTGCT+AGG - chr1_4:55868425-55868444 Msa0171230:intron 15.0%
!!! ATTTTTACATCTAGATTATT+AGG - chr1_4:55868496-55868515 Msa0171230:intron 15.0%
!!! ATAGTAATTTTGATGATATT+AGG - chr1_4:55868809-55868828 Msa0171230:CDS 15.0%
!!! GTACACTTTTATATTTATTA+CGG + chr1_4:55869522-55869541 None:intergenic 15.0%
!!! TTGTTTATAATTTTTTTCTC+AGG - chr1_4:55870181-55870200 Msa0171230:intron 15.0%
!! AAAATAATATGAAAAGGAAA+AGG - chr1_4:55870411-55870430 Msa0171230:intron 15.0%
!!! ATTATCATTTTTGAAGTATT+CGG + chr1_4:55870579-55870598 None:intergenic 15.0%
!! AATCTATATTCTATATAGAT+AGG + chr1_4:55871588-55871607 None:intergenic 15.0%
!!! TGTTTTTAATGGTTTAATTT+TGG - chr1_4:55871815-55871834 Msa0171230:CDS 15.0%
!!! GTTTTTAATGGTTTAATTTT+GGG - chr1_4:55871816-55871835 Msa0171230:CDS 15.0%
!!! ATCATGTTAACTATTTTAAT+TGG - chr1_4:55872755-55872774 Msa0171230:intron 15.0%
!!! ACTAAAATCACTTAAATTTT+GGG + chr1_4:55873166-55873185 None:intergenic 15.0%
!!! AACTAAAATCACTTAAATTT+TGG + chr1_4:55873167-55873186 None:intergenic 15.0%
!!! ATTTTATATGTACTGATTTA+TGG - chr1_4:55873804-55873823 Msa0171230:CDS 15.0%
!! TTTAATAAACTAATGAAGTT+AGG + chr1_4:55874007-55874026 None:intergenic 15.0%
!!! TAACTTCATTAGTTTATTAA+AGG - chr1_4:55874006-55874025 Msa0171230:CDS 15.0%
!!! TTCAAAATCAATATTGATTA+CGG - chr1_4:55874238-55874257 Msa0171230:CDS 15.0%
!!! TTAAAGTATTTACTTTTTGT+TGG - chr1_4:55875921-55875940 Msa0171230:intron 15.0%
!!! CAAGATTTTAAAACTATTTT+AGG - chr1_4:55876355-55876374 Msa0171230:intron 15.0%
!! TTTGTAAAATAACTAAATCT+TGG - chr1_4:55876474-55876493 Msa0171230:intron 15.0%
!! AAAGATATGTATTATAATTC+AGG + chr1_4:55877115-55877134 None:intergenic 15.0%
!! TTAAAAATATGTTAAACAAC+TGG + chr1_4:55877453-55877472 None:intergenic 15.0%
!! AAGAACACTTACTTATATTT+GGG - chr1_4:55866772-55866791 Msa0171230:CDS 20.0%
!!! TGAAGAAATTAGACATTTTT+AGG + chr1_4:55867090-55867109 None:intergenic 20.0%
!! TAAACAAAATGATTGATGTT+TGG - chr1_4:55867547-55867566 Msa0171230:intron 20.0%
!! TAAAGAATGAGAATTGATAA+AGG - chr1_4:55867637-55867656 Msa0171230:intron 20.0%
!! AAAGAATGAGAATTGATAAA+GGG - chr1_4:55867638-55867657 Msa0171230:intron 20.0%
!!! TATTGTAGAGAATTGATTTT+GGG - chr1_4:55867847-55867866 Msa0171230:CDS 20.0%
!!! AATTTGGTAATCTTATAGAT+TGG + chr1_4:55868207-55868226 None:intergenic 20.0%
!! ACTATAATTAAGCAAATTTG+CGG + chr1_4:55868382-55868401 None:intergenic 20.0%
!!! TTTTTTTGGATTTTTTTCAG+TGG - chr1_4:55868585-55868604 Msa0171230:intron 20.0%
!! TGGTTGTTAAAATGTAATAA+TGG - chr1_4:55868644-55868663 Msa0171230:CDS 20.0%
!! ATATTAGGAAAGAAAAAGTA+CGG - chr1_4:55868824-55868843 Msa0171230:CDS 20.0%
!!! CTTCTATTGATTTCATTTAT+AGG - chr1_4:55868960-55868979 Msa0171230:CDS 20.0%
!!! ATTGATTTCATTTATAGGTA+CGG - chr1_4:55868965-55868984 Msa0171230:CDS 20.0%
!! TCCTTTGGTATTAATATTAT+TGG - chr1_4:55869660-55869679 Msa0171230:CDS 20.0%
!! TAAATGTTAATATAGGCATA+TGG - chr1_4:55869831-55869850 Msa0171230:CDS 20.0%
!!! GTTTTAATATACAACAGTAA+CGG + chr1_4:55869903-55869922 None:intergenic 20.0%
!! TGTAGAAGTAAACATATAAA+TGG + chr1_4:55870129-55870148 None:intergenic 20.0%
!! ATTTATATGTTTACTTCTAC+AGG - chr1_4:55870128-55870147 Msa0171230:CDS 20.0%
!! GGATTCAAAATAATATGAAA+AGG - chr1_4:55870405-55870424 Msa0171230:intron 20.0%
!! AGATTATATTCTCCATAAAT+AGG + chr1_4:55871132-55871151 None:intergenic 20.0%
!!! AATACAAAATAGTTTGCTTA+GGG - chr1_4:55871282-55871301 Msa0171230:intron 20.0%
!!! TTATATAGCGTCTTTATTTT+AGG - chr1_4:55871778-55871797 Msa0171230:intron 20.0%
!!! TGCTTTATCTTTGTTTTTAA+TGG - chr1_4:55871804-55871823 Msa0171230:CDS 20.0%
!!! TCTTTCTAAAATACATAAAC+TGG - chr1_4:55872845-55872864 Msa0171230:intron 20.0%
!!! CTTTCTAAAATACATAAACT+GGG - chr1_4:55872846-55872865 Msa0171230:intron 20.0%
!! ATTTATACTTCAATCTCAAT+AGG + chr1_4:55872883-55872902 None:intergenic 20.0%
!!! AAAAAGTTGTATTTTGTGTA+AGG - chr1_4:55872927-55872946 Msa0171230:intron 20.0%
!! AAGGTTAAATATAATTTCAG+TGG - chr1_4:55873115-55873134 Msa0171230:intron 20.0%
!!! ATTTAAGTGATTTTAGTTGA+AGG - chr1_4:55873169-55873188 Msa0171230:intron 20.0%
!! TGTTCAATTCAATTAAGAAA+AGG - chr1_4:55873273-55873292 Msa0171230:intron 20.0%
!! GTTCAATTCAATTAAGAAAA+GGG - chr1_4:55873274-55873293 Msa0171230:intron 20.0%
!! TTCAATTCAATTAAGAAAAG+GGG - chr1_4:55873275-55873294 Msa0171230:intron 20.0%
!! CAAAGATGAAAATCATAATT+GGG + chr1_4:55873422-55873441 None:intergenic 20.0%
!! AGAAGTTCAATTTATAACTT+TGG - chr1_4:55873653-55873672 Msa0171230:intron 20.0%
!! AATATATACGAACAAAGAAT+CGG + chr1_4:55873754-55873773 None:intergenic 20.0%
!! ATATAAAATAATTCTTCGAG+AGG + chr1_4:55873793-55873812 None:intergenic 20.0%
!!! ATTGAAAATTTCCTGATTTT+TGG - chr1_4:55873952-55873971 Msa0171230:CDS 20.0%
!! TTCTAGTATTAAAACTTCTA+AGG - chr1_4:55874105-55874124 Msa0171230:CDS 20.0%
!! TCTAGTATTAAAACTTCTAA+GGG - chr1_4:55874106-55874125 Msa0171230:CDS 20.0%
!! ATTACGGAATGAAAATATAT+GGG - chr1_4:55874254-55874273 Msa0171230:CDS 20.0%
!! TAGATAAAAAAACAGTATGT+CGG - chr1_4:55874671-55874690 Msa0171230:intron 20.0%
!! CATATTAAATTAATTGATGC+AGG - chr1_4:55875747-55875766 Msa0171230:intron 20.0%
!! ATTTACATCAGAAATATGAA+AGG + chr1_4:55875961-55875980 None:intergenic 20.0%
!! TTCTTTACAAAAGAAAAAGT+AGG - chr1_4:55876943-55876962 Msa0171230:intron 20.0%
!! TCTTTACAAAAGAAAAAGTA+GGG - chr1_4:55876944-55876963 Msa0171230:intron 20.0%
!! AAAATTAATTAGGCCTAAAA+AGG - chr1_4:55877152-55877171 Msa0171230:intron 20.0%
!! AGGTTGTATATGAATAAATT+TGG + chr1_4:55877241-55877260 None:intergenic 20.0%
!!! TGTTTAACATATTTTTAACC+TGG - chr1_4:55877455-55877474 Msa0171230:intron 20.0%
!! CAAGAAAAGAAATTCAAATT+GGG + chr1_4:55877536-55877555 None:intergenic 20.0%
!! TCAAGAAAAGAAATTCAAAT+TGG + chr1_4:55877537-55877556 None:intergenic 20.0%
!! ATAAAATTAGAAAAAGGGAA+AGG - chr1_4:55878077-55878096 Msa0171230:intron 20.0%
!! TGAACCAAAATGAATAATAA+TGG + chr1_4:55878213-55878232 None:intergenic 20.0%
!!! CATTTTAGATTTTTTTTTGC+TGG - chr1_4:55878264-55878283 Msa0171230:intron 20.0%
!! TAACTAATTAAATCCAACAT+AGG + chr1_4:55878300-55878319 None:intergenic 20.0%
! ATTGGCATTTGTGAATTTAT+TGG + chr1_4:55866637-55866656 None:intergenic 25.0%
!! TATCTGATTCATTTGATGAT+TGG + chr1_4:55866655-55866674 None:intergenic 25.0%
! CAAGAACACTTACTTATATT+TGG - chr1_4:55866771-55866790 Msa0171230:CDS 25.0%
! TGATGGAATTAGTTAGAATA+TGG + chr1_4:55866863-55866882 None:intergenic 25.0%
! TTTGGTGGAATTTGAAAAAA+TGG - chr1_4:55867205-55867224 Msa0171230:intron 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr1_4:55867503-55867522 Msa0171230:intron 25.0%
! ACTAAAATAGACATAGCTAA+AGG - chr1_4:55867606-55867625 Msa0171230:intron 25.0%
!!! GTATTGTAGAGAATTGATTT+TGG - chr1_4:55867846-55867865 Msa0171230:CDS 25.0%
! TTATACAAACCCTAATAACA+AGG + chr1_4:55868149-55868168 None:intergenic 25.0%
! TCAAATAAGCAAGGATAATT+TGG + chr1_4:55868223-55868242 None:intergenic 25.0%
! GATATCTAAACAAAATCTGA+AGG + chr1_4:55868309-55868328 None:intergenic 25.0%
! TTGTTTAGATATCTCATCTT+AGG - chr1_4:55868316-55868335 Msa0171230:intron 25.0%
! TGTTTAGATATCTCATCTTA+GGG - chr1_4:55868317-55868336 Msa0171230:intron 25.0%
!!! TGGATTTTCGTTTTTTTGTT+CGG - chr1_4:55868342-55868361 Msa0171230:intron 25.0%
!! TGTTATTATTTGCTAGGTTT+AGG - chr1_4:55868431-55868450 Msa0171230:intron 25.0%
! AAATAACAGATCCATTACAA+AGG + chr1_4:55868561-55868580 None:intergenic 25.0%
!! AGTTACTTCTTTATTTGTAC+AGG - chr1_4:55869074-55869093 Msa0171230:CDS 25.0%
!! GTTACTTCTTTATTTGTACA+GGG - chr1_4:55869075-55869094 Msa0171230:CDS 25.0%
! GCCAATAATATTAATACCAA+AGG + chr1_4:55869664-55869683 None:intergenic 25.0%
!! TCTTCCTTTGTCATTATTTT+CGG - chr1_4:55869726-55869745 Msa0171230:CDS 25.0%
!!! CATTTCCAAGTTTTATGAAT+CGG - chr1_4:55869871-55869890 Msa0171230:CDS 25.0%
!!! ATTTCCAAGTTTTATGAATC+GGG - chr1_4:55869872-55869891 Msa0171230:CDS 25.0%
!!! ACCTTAAGAGCTTATTTTAT+TGG - chr1_4:55869938-55869957 Msa0171230:CDS 25.0%
!!! CCTTAAGAGCTTATTTTATT+GGG - chr1_4:55869939-55869958 Msa0171230:CDS 25.0%
!! TCTCAAGGAAAAAAGTATAT+GGG - chr1_4:55870307-55870326 Msa0171230:intron 25.0%
!! TTTTGTGAAGTTGAAACATT+TGG - chr1_4:55870491-55870510 Msa0171230:intron 25.0%
! TTTGTGAAGTTGAAACATTT+GGG - chr1_4:55870492-55870511 Msa0171230:intron 25.0%
! ATATCTCTTAAATGTTTCCA+AGG + chr1_4:55870540-55870559 None:intergenic 25.0%
!! GCTAATACAGCAATTTTAAA+TGG - chr1_4:55870614-55870633 Msa0171230:intron 25.0%
! TATGTCCAAAACAAAATGTA+AGG + chr1_4:55870794-55870813 None:intergenic 25.0%
! GGAATTTAAATAACTTTGCA+AGG - chr1_4:55870924-55870943 Msa0171230:intron 25.0%
!!! CAATACAAAATAGTTTGCTT+AGG - chr1_4:55871281-55871300 Msa0171230:intron 25.0%
! TAATGGAAAGAACAAAACTA+AGG + chr1_4:55871376-55871395 None:intergenic 25.0%
! TGTAATTCTTATTCTTGAGA+TGG + chr1_4:55871469-55871488 None:intergenic 25.0%
! AGTATAGACAACAAATACAA+AGG + chr1_4:55871520-55871539 None:intergenic 25.0%
!!! ATTTGTTGTCTATACTCTAT+AGG - chr1_4:55871524-55871543 Msa0171230:intron 25.0%
! CAAGTTTACTTAGAAAAACA+GGG + chr1_4:55871711-55871730 None:intergenic 25.0%
! TCAAGTTTACTTAGAAAAAC+AGG + chr1_4:55871712-55871731 None:intergenic 25.0%
! TTCATTGAATTATATGCATC+TGG - chr1_4:55871867-55871886 Msa0171230:CDS 25.0%
! TCATTGAATTATATGCATCT+GGG - chr1_4:55871868-55871887 Msa0171230:CDS 25.0%
!!! CACTTAAATTTTGGGAAAAT+TGG + chr1_4:55873158-55873177 None:intergenic 25.0%
! TCAATTCAATTAAGAAAAGG+GGG - chr1_4:55873276-55873295 Msa0171230:intron 25.0%
! CCAAAGATGAAAATCATAAT+TGG + chr1_4:55873423-55873442 None:intergenic 25.0%
!! CCAATTATGATTTTCATCTT+TGG - chr1_4:55873420-55873439 Msa0171230:intron 25.0%
!!! AATTTCCTGATTTTTGGAAA+AGG - chr1_4:55873958-55873977 Msa0171230:CDS 25.0%
!!! GGATCATTTATTTTACTTGA+TGG - chr1_4:55873979-55873998 Msa0171230:CDS 25.0%
!! TTCTATTTGCTTTGAATTTG+TGG - chr1_4:55874076-55874095 Msa0171230:CDS 25.0%
! CTAGTATTAAAACTTCTAAG+GGG - chr1_4:55874107-55874126 Msa0171230:CDS 25.0%
! GATTACGGAATGAAAATATA+TGG - chr1_4:55874253-55874272 Msa0171230:CDS 25.0%
!!! TTTTTTTGTCTTTTTTCCCT+AGG - chr1_4:55874306-55874325 Msa0171230:intron 25.0%
!!! TTCTTCAAAGGCATTAAAAA+TGG - chr1_4:55874372-55874391 Msa0171230:intron 25.0%
! ATAACGAAAGAGGAAAAATT+TGG + chr1_4:55874542-55874561 None:intergenic 25.0%
! AATTAAGTGCAGTTTATAGA+TGG - chr1_4:55874605-55874624 Msa0171230:intron 25.0%
! ATTAAGTGCAGTTTATAGAT+GGG - chr1_4:55874606-55874625 Msa0171230:intron 25.0%
! TACTGAGATATAAGAAGTTA+GGG + chr1_4:55874653-55874672 None:intergenic 25.0%
! AGATAAAAAAACAGTATGTC+GGG - chr1_4:55874672-55874691 Msa0171230:intron 25.0%
!! CTAAGAAGTATGATATCTTT+AGG + chr1_4:55875015-55875034 None:intergenic 25.0%
! TATGAAAAGAAAGATCTACT+GGG + chr1_4:55875302-55875321 None:intergenic 25.0%
! ATATGAAAAGAAAGATCTAC+TGG + chr1_4:55875303-55875322 None:intergenic 25.0%
!! GTAGATCTTTCTTTTCATAT+AGG - chr1_4:55875303-55875322 Msa0171230:CDS 25.0%
! TCATAGTTTAAAAAGTTTGG+AGG - chr1_4:55875386-55875405 Msa0171230:intron 25.0%
! AGATATTTATGTATCGAACA+CGG + chr1_4:55875782-55875801 None:intergenic 25.0%
! TCTATAACATTAACGTCATA+GGG + chr1_4:55876146-55876165 None:intergenic 25.0%
! ATCTTAAAAATTTAGTCGTG+AGG - chr1_4:55876236-55876255 Msa0171230:intron 25.0%
!! AGTCACATGTTTAACTTATT+GGG - chr1_4:55876306-55876325 Msa0171230:intron 25.0%
! CTGTTAGTTGAAAATTACTT+TGG - chr1_4:55876389-55876408 Msa0171230:intron 25.0%
! AAAATTACCTTCACTATTTC+TGG + chr1_4:55876695-55876714 None:intergenic 25.0%
! CTTTACAAAAGAAAAAGTAG+GGG - chr1_4:55876945-55876964 Msa0171230:intron 25.0%
!! AAAAAATCAAGAGCCTTTTT+AGG + chr1_4:55877168-55877187 None:intergenic 25.0%
!!! CTAAAACGAATTTTAAGTTG+AGG + chr1_4:55877217-55877236 None:intergenic 25.0%
!! CTCAACTTAAAATTCGTTTT+AGG - chr1_4:55877215-55877234 Msa0171230:intron 25.0%
!!! TTCATGTGATTTTTTCATGA+AGG + chr1_4:55877325-55877344 None:intergenic 25.0%
!!! TTAATTTTGTTTATTCAGCC+TGG - chr1_4:55877401-55877420 Msa0171230:intron 25.0%
!!! TATTTTTAACCTGGTGTTTT+AGG - chr1_4:55877464-55877483 Msa0171230:intron 25.0%
!! ATTTTTAACCTGGTGTTTTA+GGG - chr1_4:55877465-55877484 Msa0171230:intron 25.0%
!! CATAGAGAATTTTTGCAATT+GGG + chr1_4:55877864-55877883 None:intergenic 25.0%
!! TCATAGAGAATTTTTGCAAT+TGG + chr1_4:55877865-55877884 None:intergenic 25.0%
! TTACATGTCAAGAAAAAGTT+AGG + chr1_4:55877948-55877967 None:intergenic 25.0%
!! TTATTTAAAGTGACAGTGTT+TGG - chr1_4:55878125-55878144 Msa0171230:intron 25.0%
!!! GTTCACATTTTGAAACAATT+AGG - chr1_4:55878239-55878258 Msa0171230:intron 25.0%
!! TGTTCTTGTTGTTGAATTGT+TGG + chr1_4:55866759-55866778 None:intergenic 30.0%
!!! GTTTTTTGGATTGCTAATGA+TGG + chr1_4:55866880-55866899 None:intergenic 30.0%
! TAGACATTTTACCAAACACA+TGG - chr1_4:55866916-55866935 Msa0171230:intron 30.0%
! ATGTTGTTTAGAGTACAATG+TGG + chr1_4:55866994-55867013 None:intergenic 30.0%
! TGGTGTGAAAAATCGTATTT+TGG - chr1_4:55867225-55867244 Msa0171230:intron 30.0%
ATATTCAAAGCTGAACCAAA+CGG + chr1_4:55867429-55867448 None:intergenic 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG - chr1_4:55867824-55867843 Msa0171230:CDS 30.0%
ATAAACTTTCCAGTTTGGTT+TGG + chr1_4:55867893-55867912 None:intergenic 30.0%
GTATCATAAACTTTCCAGTT+TGG + chr1_4:55867898-55867917 None:intergenic 30.0%
!!! GTTTTTGGGTTACTTAATCA+AGG + chr1_4:55867946-55867965 None:intergenic 30.0%
!!! ATTGAGTACAAGGGTATTTT+GGG + chr1_4:55867979-55867998 None:intergenic 30.0%
!!! TATTGAGTACAAGGGTATTT+TGG + chr1_4:55867980-55867999 None:intergenic 30.0%
CATGAAGTTATTGAGTACAA+GGG + chr1_4:55867988-55868007 None:intergenic 30.0%
! GTAATCTTATAGATTGGTTC+TGG + chr1_4:55868201-55868220 None:intergenic 30.0%
TGAATATATGAAAAACGCGT+TGG + chr1_4:55868262-55868281 None:intergenic 30.0%
CAAAGGATCTTCACAAAATT+AGG + chr1_4:55868544-55868563 None:intergenic 30.0%
TTTGTGAAGATCCTTTGTAA+TGG - chr1_4:55868547-55868566 Msa0171230:intron 30.0%
! GAATTTTTGATCTCATGATC+TGG - chr1_4:55868624-55868643 Msa0171230:CDS 30.0%
TGGACTTAAGTTTAAAGATC+TGG - chr1_4:55868664-55868683 Msa0171230:CDS 30.0%
!!! TATGCATTTGCTTTTTGATC+TGG - chr1_4:55868719-55868738 Msa0171230:intron 30.0%
GTCGTTGAAAATGTATTTGT+TGG - chr1_4:55868774-55868793 Msa0171230:intron 30.0%
! ACGTGGATTCATTTAAGATT+TGG - chr1_4:55869468-55869487 Msa0171230:CDS 30.0%
GTAACCGAAAATAATGACAA+AGG + chr1_4:55869733-55869752 None:intergenic 30.0%
CCCAATAAAATAAGCTCTTA+AGG + chr1_4:55869942-55869961 None:intergenic 30.0%
GTAATTGACAATCGAAGTTT+CGG - chr1_4:55869980-55869999 Msa0171230:CDS 30.0%
TAATTGACAATCGAAGTTTC+GGG - chr1_4:55869981-55870000 Msa0171230:CDS 30.0%
!!! CATATACTTTTTTCCTTGAG+AGG + chr1_4:55870308-55870327 None:intergenic 30.0%
! CTCTCAAGGAAAAAAGTATA+TGG - chr1_4:55870306-55870325 Msa0171230:intron 30.0%
! AAGGAAAAAAGTATATGGGA+GGG - chr1_4:55870311-55870330 Msa0171230:intron 30.0%
ATGTTTCCAAGGTAAATTCT+GGG + chr1_4:55870529-55870548 None:intergenic 30.0%
AATGTTTCCAAGGTAAATTC+TGG + chr1_4:55870530-55870549 None:intergenic 30.0%
AAAATTGCTGTATTAGCACT+TGG + chr1_4:55870611-55870630 None:intergenic 30.0%
CCAAAACAAAATGTAAGGAA+GGG + chr1_4:55870789-55870808 None:intergenic 30.0%
TCCAAAACAAAATGTAAGGA+AGG + chr1_4:55870790-55870809 None:intergenic 30.0%
!!! TTTGTTTTGGACATACTTCT+AGG - chr1_4:55870799-55870818 Msa0171230:intron 30.0%
TATGAAACCAGTGATATATC+TGG - chr1_4:55870968-55870987 Msa0171230:intron 30.0%
ATACAAACACAATATGCACA+TGG + chr1_4:55871563-55871582 None:intergenic 30.0%
!!! GTTTGTTTTACTTGCTAGAT+AGG - chr1_4:55872118-55872137 Msa0171230:CDS 30.0%
AACTATCGATATCTTCACAT+TGG - chr1_4:55872157-55872176 Msa0171230:intron 30.0%
ACTATCGATATCTTCACATT+GGG - chr1_4:55872158-55872177 Msa0171230:intron 30.0%
AGAAATGAAATATGGAAGGT+GGG + chr1_4:55872222-55872241 None:intergenic 30.0%
AGTCAGAAATGAAATATGGA+AGG + chr1_4:55872226-55872245 None:intergenic 30.0%
TTTGCTGAAGAAAAACACTT+CGG - chr1_4:55872622-55872641 Msa0171230:intron 30.0%
ACACTTCGGATAATCTAAAA+TGG - chr1_4:55872636-55872655 Msa0171230:intron 30.0%
CTAAAATGGAAAGATGTTTG+TGG - chr1_4:55872650-55872669 Msa0171230:intron 30.0%
AAAGATGTTTGTGGAAAAGA+CGG - chr1_4:55872659-55872678 Msa0171230:intron 30.0%
CTCCATATAATACTGTAGAA+CGG - chr1_4:55872717-55872736 Msa0171230:intron 30.0%
TCCATATAATACTGTAGAAC+GGG - chr1_4:55872718-55872737 Msa0171230:intron 30.0%
ATTAGAAGATAGAAGCAGTT+GGG + chr1_4:55872907-55872926 None:intergenic 30.0%
TATTAGAAGATAGAAGCAGT+TGG + chr1_4:55872908-55872927 None:intergenic 30.0%
! TGTATTTTGTGTAAGGTAAG+TGG - chr1_4:55872934-55872953 Msa0171230:intron 30.0%
! GTATTTTGTGTAAGGTAAGT+GGG - chr1_4:55872935-55872954 Msa0171230:intron 30.0%
CCTAAAGAAATCTTGAATGA+AGG + chr1_4:55873223-55873242 None:intergenic 30.0%
CCTTCATTCAAGATTTCTTT+AGG - chr1_4:55873220-55873239 Msa0171230:intron 30.0%
TTTCAACTTCATTGGAAGTA+AGG - chr1_4:55873513-55873532 Msa0171230:CDS 30.0%
TTCAACTTCATTGGAAGTAA+GGG - chr1_4:55873514-55873533 Msa0171230:CDS 30.0%
CAGAAAAATGGTTAGAAGTT+TGG + chr1_4:55873552-55873571 None:intergenic 30.0%
TTGGAAGATATTCTTGAATC+AGG - chr1_4:55873672-55873691 Msa0171230:intron 30.0%
ACAGCAAATGTTAACTACAA+AGG - chr1_4:55873700-55873719 Msa0171230:intron 30.0%
TGTTAACTACAAAGGAATGA+AGG - chr1_4:55873708-55873727 Msa0171230:intron 30.0%
ACAAGTGAAAACTAATGAGT+TGG + chr1_4:55873915-55873934 None:intergenic 30.0%
! TAGTTTTCACTTGTCTTCAT+TGG - chr1_4:55873921-55873940 Msa0171230:CDS 30.0%
! AGTTTTCACTTGTCTTCATT+GGG - chr1_4:55873922-55873941 Msa0171230:CDS 30.0%
! ATGATCCTTTTCCAAAAATC+AGG + chr1_4:55873966-55873985 None:intergenic 30.0%
!! TGATTTTGAAAGTGAGAAGT+CGG + chr1_4:55874228-55874247 None:intergenic 30.0%
CGAACTAAATATTCTTGTTG+AGG - chr1_4:55874570-55874589 Msa0171230:intron 30.0%
AAATATTCTTGTTGAGGCAT+TGG - chr1_4:55874576-55874595 Msa0171230:intron 30.0%
CTACTGAGATATAAGAAGTT+AGG + chr1_4:55874654-55874673 None:intergenic 30.0%
!! CGTAAGATCTTTGCTATTAA+AGG - chr1_4:55874865-55874884 Msa0171230:CDS 30.0%
CTTGATTGAATTCACAAACA+GGG + chr1_4:55874924-55874943 None:intergenic 30.0%
TCTTGATTGAATTCACAAAC+AGG + chr1_4:55874925-55874944 None:intergenic 30.0%
TGTTTGTGAATTCAATCAAG+AGG - chr1_4:55874924-55874943 Msa0171230:intron 30.0%
AGATGTCAGATTCAAATAGA+AGG - chr1_4:55875058-55875077 Msa0171230:CDS 30.0%
TATCTTCTATATCACTACAC+AGG + chr1_4:55875128-55875147 None:intergenic 30.0%
ATGAAAAGAAAGATCTACTG+GGG + chr1_4:55875301-55875320 None:intergenic 30.0%
! TCTTTTCATATAGGTCTTAC+TGG - chr1_4:55875312-55875331 Msa0171230:CDS 30.0%
CGGTCATAGTTTAAAAAGTT+TGG - chr1_4:55875383-55875402 Msa0171230:intron 30.0%
ATTCAGGCTATATTTCCAAA+GGG - chr1_4:55875657-55875676 Msa0171230:intron 30.0%
ATATAGTAACATGTACTGCA+TGG + chr1_4:55875810-55875829 None:intergenic 30.0%
ATTTCAGAAATTCTTGATGC+TGG - chr1_4:55875828-55875847 Msa0171230:intron 30.0%
AAAGATTGCAGTTAAGCATA+AGG + chr1_4:55875885-55875904 None:intergenic 30.0%
!! TGACAAGATTTTAGCACAAA+GGG + chr1_4:55876008-55876027 None:intergenic 30.0%
!! TTGACAAGATTTTAGCACAA+AGG + chr1_4:55876009-55876028 None:intergenic 30.0%
TTTGTGCTAAAATCTTGTCA+AGG - chr1_4:55876008-55876027 Msa0171230:intron 30.0%
AATTCTTGCCCACATAATAA+GGG + chr1_4:55876039-55876058 None:intergenic 30.0%
AAATTCTTGCCCACATAATA+AGG + chr1_4:55876040-55876059 None:intergenic 30.0%
AGAATTTGATGGAAGATTCT+TGG - chr1_4:55876053-55876072 Msa0171230:intron 30.0%
CTCTATAACATTAACGTCAT+AGG + chr1_4:55876147-55876166 None:intergenic 30.0%
AAGATTATATGTGCCCATAA+TGG + chr1_4:55876221-55876240 None:intergenic 30.0%
! CAGTCACATGTTTAACTTAT+TGG - chr1_4:55876305-55876324 Msa0171230:intron 30.0%
GTTGAAAATTACTTTGGACA+TGG - chr1_4:55876395-55876414 Msa0171230:intron 30.0%
! ATTATTTTCCAAGGAAACCT+GGG + chr1_4:55876507-55876526 None:intergenic 30.0%
TTTCCTTGGAAAATAATCCA+AGG - chr1_4:55876510-55876529 Msa0171230:intron 30.0%
TTCCTTGGAAAATAATCCAA+GGG - chr1_4:55876511-55876530 Msa0171230:intron 30.0%
ATAGCAAAACAGTTTAAGCT+GGG - chr1_4:55876599-55876618 Msa0171230:intron 30.0%
! ATTTTCATAATGTGCAACTC+AGG - chr1_4:55876847-55876866 Msa0171230:intron 30.0%
! TTTTCAGTAGATCACAAAAC+AGG + chr1_4:55876884-55876903 None:intergenic 30.0%
! GTTTTGTGATCTACTGAAAA+TGG - chr1_4:55876884-55876903 Msa0171230:intron 30.0%
ACTCGGATTAAAAAGAAGAA+AGG + chr1_4:55877500-55877519 None:intergenic 30.0%
CTTATCTGCTTTCTTTAATC+AGG - chr1_4:55877585-55877604 Msa0171230:intron 30.0%
TTTCTTTAATCAGGCTATTG+AGG - chr1_4:55877594-55877613 Msa0171230:intron 30.0%
CCTATTTAAAAAAGCGAATC+CGG - chr1_4:55877780-55877799 Msa0171230:intron 30.0%
TACAATGAGTTCAATTCTTC+CGG + chr1_4:55877802-55877821 None:intergenic 30.0%
TGTAAATTGTAGTTCATCTG+AGG - chr1_4:55877963-55877982 Msa0171230:intron 30.0%
GAGGTTATAGAGAAAGAAAA+AGG - chr1_4:55878042-55878061 Msa0171230:intron 30.0%
CCAAAATGAATAATAATGGC+CGG + chr1_4:55878209-55878228 None:intergenic 30.0%
!!! ATTTTTTTTTGCTGGACTCT+AGG - chr1_4:55878272-55878291 Msa0171230:intron 30.0%
CCCTTAATCAAACCTGATTT+GGG + chr1_4:55866184-55866203 None:intergenic 35.0%
CCCAAATCAGGTTTGATTAA+GGG - chr1_4:55866181-55866200 Msa0171230:three_prime_UTR 35.0%
CCAAATCAGGTTTGATTAAG+GGG - chr1_4:55866182-55866201 Msa0171230:three_prime_UTR 35.0%
TAGTATGTTTGACTGCAATG+TGG + chr1_4:55866823-55866842 None:intergenic 35.0%
AAAATTGCACTCCATGTGTT+TGG + chr1_4:55866930-55866949 None:intergenic 35.0%
GAGTACAATGTGGTAGTTTA+TGG + chr1_4:55866984-55867003 None:intergenic 35.0%
TGTCAGTGATGAATTAAGTC+AGG + chr1_4:55867030-55867049 None:intergenic 35.0%
!!! TGGCTTGCATGTTAGTTTTT+AGG + chr1_4:55867055-55867074 None:intergenic 35.0%
!! GATGATGATTTGCTTGAGTT+TGG - chr1_4:55867187-55867206 Msa0171230:intron 35.0%
TGGTGAAGTTTGAAAGTGAA+TGG - chr1_4:55867245-55867264 Msa0171230:intron 35.0%
GGTGAAGTTTGAAAGTGAAT+GGG - chr1_4:55867246-55867265 Msa0171230:intron 35.0%
! GCATACTTGTCATTTCAGTT+GGG - chr1_4:55867358-55867377 Msa0171230:intron 35.0%
!! AATTCTTTTAAGTGCCCGTT+TGG - chr1_4:55867411-55867430 Msa0171230:intron 35.0%
TATTCAAAGCTGAACCAAAC+GGG + chr1_4:55867428-55867447 None:intergenic 35.0%
CTATCAGAATCAATTCTCTC+AGG + chr1_4:55867459-55867478 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG - chr1_4:55867700-55867719 Msa0171230:intron 35.0%
TATCCTTGAACAACGTGTAT+AGG + chr1_4:55867706-55867725 None:intergenic 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr1_4:55867731-55867750 Msa0171230:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG - chr1_4:55867808-55867827 Msa0171230:CDS 35.0%
GGGTTACTTAATCAAGGTTT+GGG + chr1_4:55867940-55867959 None:intergenic 35.0%
TGGGTTACTTAATCAAGGTT+TGG + chr1_4:55867941-55867960 None:intergenic 35.0%
! TGGGGTTTTCAGATGTTTTT+GGG + chr1_4:55867960-55867979 None:intergenic 35.0%
! TTGGGGTTTTCAGATGTTTT+TGG + chr1_4:55867961-55867980 None:intergenic 35.0%
!!! TTGAGTACAAGGGTATTTTG+GGG + chr1_4:55867978-55867997 None:intergenic 35.0%
GCATGAAGTTATTGAGTACA+AGG + chr1_4:55867989-55868008 None:intergenic 35.0%
!! TCATCCTCTACCTTGTTATT+AGG - chr1_4:55868136-55868155 Msa0171230:intron 35.0%
!! CATCCTCTACCTTGTTATTA+GGG - chr1_4:55868137-55868156 Msa0171230:intron 35.0%
AAACCCTAATAACAAGGTAG+AGG + chr1_4:55868143-55868162 None:intergenic 35.0%
GTGAATCAGTCAAATAAGCA+AGG + chr1_4:55868232-55868251 None:intergenic 35.0%
AGATATCTCATCTTAGGGTA+TGG - chr1_4:55868322-55868341 Msa0171230:intron 35.0%
CGAGCTATTTATGAAGTTAG+CGG - chr1_4:55868924-55868943 Msa0171230:CDS 35.0%
AACACATATCCTCATAAGCT+CGG + chr1_4:55869157-55869176 None:intergenic 35.0%
GATGTATATGACTCAAAACC+CGG + chr1_4:55869210-55869229 None:intergenic 35.0%
!! AAAGCACCTTTTGGCAATTA+CGG + chr1_4:55869637-55869656 None:intergenic 35.0%
ACATCCCGATTCATAAAACT+TGG + chr1_4:55869879-55869898 None:intergenic 35.0%
!!! TTTTTTCCTTGAGAGGACAA+GGG + chr1_4:55870301-55870320 None:intergenic 35.0%
! CAAGGAAAAAAGTATATGGG+AGG - chr1_4:55870310-55870329 Msa0171230:intron 35.0%
AAACTTCAGAATCGTAACTC+AGG - chr1_4:55870368-55870387 Msa0171230:intron 35.0%
AACTTCAGAATCGTAACTCA+GGG - chr1_4:55870369-55870388 Msa0171230:intron 35.0%
ACTTCACAAAATCCTGCATT+AGG + chr1_4:55870482-55870501 None:intergenic 35.0%
!! CCCTTCCTTACATTTTGTTT+TGG - chr1_4:55870786-55870805 Msa0171230:intron 35.0%
ACATACTTCTAGGTGCTTTA+TGG - chr1_4:55870809-55870828 Msa0171230:intron 35.0%
TACGAGCAGTACATAAAATC+TGG - chr1_4:55870899-55870918 Msa0171230:intron 35.0%
ACGAGCAGTACATAAAATCT+GGG - chr1_4:55870900-55870919 Msa0171230:intron 35.0%
AATAACTTTGCAAGGTTACC+AGG - chr1_4:55870932-55870951 Msa0171230:intron 35.0%
TACAACACCAGATATATCAC+TGG + chr1_4:55870978-55870997 None:intergenic 35.0%
CACATTCCTATATACAACCA+TGG + chr1_4:55871004-55871023 None:intergenic 35.0%
! TGTGCTTTTCCTCATTTTGT+TGG - chr1_4:55871020-55871039 Msa0171230:intron 35.0%
! GTGCTTTTCCTCATTTTGTT+GGG - chr1_4:55871021-55871040 Msa0171230:intron 35.0%
! TTTCCTCATTTTGTTGGGTA+AGG - chr1_4:55871026-55871045 Msa0171230:intron 35.0%
!!! ATGTTTTTTATTTGCCGCTG+TGG - chr1_4:55871247-55871266 Msa0171230:intron 35.0%
ATATGCAATTGATTGTGCTC+CGG - chr1_4:55871424-55871443 Msa0171230:intron 35.0%
ACTTAGAAAAACAGGGCAAA+AGG + chr1_4:55871704-55871723 None:intergenic 35.0%
! ATTTGCATGCATCTTTTGCA+GGG + chr1_4:55871918-55871937 None:intergenic 35.0%
! AATTTGCATGCATCTTTTGC+AGG + chr1_4:55871919-55871938 None:intergenic 35.0%
TGCAAAAGATGCATGCAAAT+TGG - chr1_4:55871918-55871937 Msa0171230:CDS 35.0%
GGTTGTTCTTCAAAAAGTTC+AGG + chr1_4:55871967-55871986 None:intergenic 35.0%
CAAACAAGACGATAAACAAG+AGG + chr1_4:55872103-55872122 None:intergenic 35.0%
GAAATGAAATATGGAAGGTG+GGG + chr1_4:55872221-55872240 None:intergenic 35.0%
CAGAAATGAAATATGGAAGG+TGG + chr1_4:55872223-55872242 None:intergenic 35.0%
GCTCAGTCAGAAATGAAATA+TGG + chr1_4:55872230-55872249 None:intergenic 35.0%
ACTTTCTAACTTTCGCTTAC+AGG - chr1_4:55872313-55872332 Msa0171230:intron 35.0%
CCTTTGGACTTAAGAATAGA+AGG + chr1_4:55872353-55872372 None:intergenic 35.0%
CCTTCTATTCTTAAGTCCAA+AGG - chr1_4:55872350-55872369 Msa0171230:intron 35.0%
! TTTTGGACACACCTATAAAC+TGG + chr1_4:55872380-55872399 None:intergenic 35.0%
ATGTTAGAATAAAGTCCCCA+GGG + chr1_4:55872403-55872422 None:intergenic 35.0%
AATGTTAGAATAAAGTCCCC+AGG + chr1_4:55872404-55872423 None:intergenic 35.0%
TCTATAGCAATATGTCCATG+TGG + chr1_4:55872506-55872525 None:intergenic 35.0%
ATATTGCTATAGAGCTGTAC+CGG - chr1_4:55872513-55872532 Msa0171230:CDS 35.0%
TCTCATGATAAGCTATTGCT+TGG - chr1_4:55872560-55872579 Msa0171230:CDS 35.0%
CTCATGATAAGCTATTGCTT+GGG - chr1_4:55872561-55872580 Msa0171230:CDS 35.0%
TCATGATAAGCTATTGCTTG+GGG - chr1_4:55872562-55872581 Msa0171230:CDS 35.0%
!!! TCTTTTGGCAAAAGCATTCA+AGG - chr1_4:55872682-55872701 Msa0171230:intron 35.0%
TCCCGTTCTACAGTATTATA+TGG + chr1_4:55872722-55872741 None:intergenic 35.0%
TTAGAAGATAGAAGCAGTTG+GGG + chr1_4:55872906-55872925 None:intergenic 35.0%
CTGTCATCACCTAACTATTT+AGG - chr1_4:55873034-55873053 Msa0171230:intron 35.0%
TCTCGAAAGCCTAAATAGTT+AGG + chr1_4:55873046-55873065 None:intergenic 35.0%
ATTTAGGCTTTCGAGATAGT+TGG - chr1_4:55873050-55873069 Msa0171230:intron 35.0%
AGCTTATTGTGCTTAAAGTG+TGG - chr1_4:55873460-55873479 Msa0171230:CDS 35.0%
!! TTCTAACCATTTTTCTGTCG+AGG - chr1_4:55873555-55873574 Msa0171230:CDS 35.0%
! CTGCTTGATAAGTTGAAGTT+AGG - chr1_4:55873588-55873607 Msa0171230:CDS 35.0%
! CTTGATAAGTTGAAGTTAGG+TGG - chr1_4:55873591-55873610 Msa0171230:CDS 35.0%
TAACTACAAAGGAATGAAGG+TGG - chr1_4:55873711-55873730 Msa0171230:intron 35.0%
! GTTTTCACTTGTCTTCATTG+GGG - chr1_4:55873923-55873942 Msa0171230:CDS 35.0%
! TTTTCACTTGTCTTCATTGG+GGG - chr1_4:55873924-55873943 Msa0171230:CDS 35.0%
! TCTTTTTCTTGCCAGTTTGA+GGG + chr1_4:55874200-55874219 None:intergenic 35.0%
! ATCTTTTTCTTGCCAGTTTG+AGG + chr1_4:55874201-55874220 None:intergenic 35.0%
ATTTCTCTGCAGTTCTTCAA+AGG - chr1_4:55874360-55874379 Msa0171230:intron 35.0%
! TTTTGATGCTACCAGTGAAA+GGG - chr1_4:55874402-55874421 Msa0171230:CDS 35.0%
CGCTAATATCATAACGAAAG+AGG + chr1_4:55874552-55874571 None:intergenic 35.0%
TTTGACAGATGTTCCAATAG+TGG - chr1_4:55874759-55874778 Msa0171230:intron 35.0%
! GAATTTGCTTGATCCACTAT+TGG + chr1_4:55874775-55874794 None:intergenic 35.0%
AGCAAATTCTGCAAATAGCA+AGG - chr1_4:55874786-55874805 Msa0171230:intron 35.0%
GTCAGATTCAAATAGAAGGA+AGG - chr1_4:55875062-55875081 Msa0171230:CDS 35.0%
AGATTCAAATAGAAGGAAGG+TGG - chr1_4:55875065-55875084 Msa0171230:CDS 35.0%
! ACTTTTTAAACTATGACCGC+TGG + chr1_4:55875382-55875401 None:intergenic 35.0%
GATAATCATGAGAGGTTTGA+TGG - chr1_4:55875459-55875478 Msa0171230:intron 35.0%
ATTGTCTGCTACATTAGAAG+TGG + chr1_4:55875490-55875509 None:intergenic 35.0%
!! AATGTTGAGCCTTTGGAATT+TGG - chr1_4:55875603-55875622 Msa0171230:intron 35.0%
CATTCAGGCTATATTTCCAA+AGG - chr1_4:55875656-55875675 Msa0171230:intron 35.0%
!! GGTGAAAGTACCATAAATAG+AGG + chr1_4:55875864-55875883 None:intergenic 35.0%
AAGGTTTACCCCTTATTATG+TGG - chr1_4:55876027-55876046 Msa0171230:intron 35.0%
AGGTTTACCCCTTATTATGT+GGG - chr1_4:55876028-55876047 Msa0171230:intron 35.0%
ATTCTTGCCCACATAATAAG+GGG + chr1_4:55876038-55876057 None:intergenic 35.0%
TTATGTGGGCAAGAATTTGA+TGG - chr1_4:55876042-55876061 Msa0171230:intron 35.0%
AAAGCCATGAACTGGAAAAT+AGG + chr1_4:55876083-55876102 None:intergenic 35.0%
AATGAACAATGTCCATCTCA+GGG + chr1_4:55876192-55876211 None:intergenic 35.0%
TTGAAAAAGCAGTTGTGATC+TGG - chr1_4:55876264-55876283 Msa0171230:intron 35.0%
!! AATCTTGATTTTGATCCGAC+AGG + chr1_4:55876342-55876361 None:intergenic 35.0%
AAATTACTTTGGACATGGAG+AGG - chr1_4:55876400-55876419 Msa0171230:intron 35.0%
TTCCAGCCAATTGAATAACT+CGG + chr1_4:55876440-55876459 None:intergenic 35.0%
GTTATTCAATTGGCTGGAAT+TGG - chr1_4:55876441-55876460 Msa0171230:intron 35.0%
AATTGGCTGGAATTGGAAAT+AGG - chr1_4:55876448-55876467 Msa0171230:intron 35.0%
! GATTATTTTCCAAGGAAACC+TGG + chr1_4:55876508-55876527 None:intergenic 35.0%
ATATGAATGAAAACCTCCCT+TGG + chr1_4:55876530-55876549 None:intergenic 35.0%
ATATGTCAGCAACAAAATGC+TGG - chr1_4:55876546-55876565 Msa0171230:intron 35.0%
TATGTCAGCAACAAAATGCT+GGG - chr1_4:55876547-55876566 Msa0171230:intron 35.0%
GATAGCAAAACAGTTTAAGC+TGG - chr1_4:55876598-55876617 Msa0171230:intron 35.0%
TTCTTCACCAGAAATAGTGA+AGG - chr1_4:55876685-55876704 Msa0171230:intron 35.0%
! AAGCAACTAAAGCATTTGCT+CGG - chr1_4:55876981-55877000 Msa0171230:intron 35.0%
TGGGCATAACAAAACTAACT+CGG + chr1_4:55877517-55877536 None:intergenic 35.0%
!!! CATAGTTTTGATAGCTCTCA+AGG - chr1_4:55877558-55877577 Msa0171230:intron 35.0%
TCGAGTTTGTCATGAATACT+GGG - chr1_4:55877630-55877649 Msa0171230:intron 35.0%
!!! CCGGATTCGCTTTTTTAAAT+AGG + chr1_4:55877783-55877802 None:intergenic 35.0%
TCCAAATAATCGATCACCTA+GGG + chr1_4:55877910-55877929 None:intergenic 35.0%
AAAAACCCAAAGACTAAGGT+TGG + chr1_4:55878007-55878026 None:intergenic 35.0%
TTTCTCTATAACCTCCATTC+AGG + chr1_4:55878037-55878056 None:intergenic 35.0%
TTAAAGTGACAGTGTTTGGA+TGG - chr1_4:55878129-55878148 Msa0171230:intron 35.0%
! AAAGTTTCAAAGCGTCACTT+TGG - chr1_4:55878152-55878171 Msa0171230:intron 35.0%
TTGCCTCATGAAATTCTGAA+AGG - chr1_4:55878175-55878194 Msa0171230:intron 35.0%
TTGCCTTTCAGAATTTCATG+AGG + chr1_4:55878181-55878200 None:intergenic 35.0%
! TCATGAAATTCTGAAAGGCA+AGG - chr1_4:55878180-55878199 Msa0171230:intron 35.0%
! CCGGCCATTATTATTCATTT+TGG - chr1_4:55878206-55878225 Msa0171230:intron 35.0%
!! GACTCTGAGATAAGAGAAAC+CGG - chr1_4:55866133-55866152 Msa0171230:three_prime_UTR 40.0%
!! ACTCTGAGATAAGAGAAACC+GGG - chr1_4:55866134-55866153 Msa0171230:three_prime_UTR 40.0%
GCCCAAATCAGGTTTGATTA+AGG - chr1_4:55866180-55866199 Msa0171230:three_prime_UTR 40.0%
CCCCTTAATCAAACCTGATT+TGG + chr1_4:55866185-55866204 None:intergenic 40.0%
AATCAGGTTTGATTAAGGGG+AGG - chr1_4:55866185-55866204 Msa0171230:three_prime_UTR 40.0%
ATCAGGTTTGATTAAGGGGA+GGG - chr1_4:55866186-55866205 Msa0171230:three_prime_UTR 40.0%
! GCGCTTATAGAACAAGCTTT+TGG + chr1_4:55866593-55866612 None:intergenic 40.0%
GACTGCAATGTGGTAGTTTA+CGG + chr1_4:55866813-55866832 None:intergenic 40.0%
!! GATGATTTGCTTGAGTTTGG+TGG - chr1_4:55867190-55867209 Msa0171230:intron 40.0%
AGTTAACTAGCGCACCTTAT+AGG + chr1_4:55867329-55867348 None:intergenic 40.0%
TGCGCTAGTTAACTAATGCA+GGG - chr1_4:55867335-55867354 Msa0171230:intron 40.0%
! GGCATACTTGTCATTTCAGT+TGG - chr1_4:55867357-55867376 Msa0171230:intron 40.0%
AGCTAGGATTTGTAGCTTCA+TGG - chr1_4:55867747-55867766 Msa0171230:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG - chr1_4:55867761-55867780 Msa0171230:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG - chr1_4:55867764-55867783 Msa0171230:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG + chr1_4:55867815-55867834 None:intergenic 40.0%
! TGAAAAACGCGTTGGTACAA+TGG + chr1_4:55868254-55868273 None:intergenic 40.0%
CCAGAGAGTTAGTTCAGTTA+AGG + chr1_4:55868885-55868904 None:intergenic 40.0%
CCTTAACTGAACTAACTCTC+TGG - chr1_4:55868882-55868901 Msa0171230:CDS 40.0%
CATCAATGACCTCATGCAAA+GGG + chr1_4:55869130-55869149 None:intergenic 40.0%
CTTTGCATGAGGTCATTGAT+GGG - chr1_4:55869129-55869148 Msa0171230:CDS 40.0%
TTTGCATGAGGTCATTGATG+GGG - chr1_4:55869130-55869149 Msa0171230:CDS 40.0%
ATACATCTTTCGCACTGAAG+AGG - chr1_4:55869223-55869242 Msa0171230:CDS 40.0%
TACATCTTTCGCACTGAAGA+GGG - chr1_4:55869224-55869243 Msa0171230:CDS 40.0%
ATCTGAATCACAGTCAACTC+AGG - chr1_4:55869308-55869327 Msa0171230:CDS 40.0%
CCTTTGCACTATCACTCAAT+TGG + chr1_4:55869347-55869366 None:intergenic 40.0%
! CCAATTGAGTGATAGTGCAA+AGG - chr1_4:55869344-55869363 Msa0171230:CDS 40.0%
AATCCATCTTCTTCGTCGAA+GGG + chr1_4:55869379-55869398 None:intergenic 40.0%
TAATCCATCTTCTTCGTCGA+AGG + chr1_4:55869380-55869399 None:intergenic 40.0%
!! CGAAGAAGATGGATTAACCA+TGG - chr1_4:55869384-55869403 Msa0171230:CDS 40.0%
! ATGATCAAGTTAGTCTCACG+TGG - chr1_4:55869451-55869470 Msa0171230:CDS 40.0%
! TTTTGGCAATTACGGCAATC+TGG + chr1_4:55869629-55869648 None:intergenic 40.0%
AGATTGCCGTAATTGCCAAA+AGG - chr1_4:55869628-55869647 Msa0171230:CDS 40.0%
!! AAAGGAAGCAAAGCACCTTT+TGG + chr1_4:55869646-55869665 None:intergenic 40.0%
!! AAAAGGTGCTTTGCTTCCTT+TGG - chr1_4:55869645-55869664 Msa0171230:CDS 40.0%
!! ACAGGAGCATTCTCAATTTG+TGG + chr1_4:55870046-55870065 None:intergenic 40.0%
ACAATACGGCAGATTCCATA+TGG + chr1_4:55870257-55870276 None:intergenic 40.0%
! TTTTTCCTTGAGAGGACAAG+GGG + chr1_4:55870300-55870319 None:intergenic 40.0%
!!! CTTTTTTCCTTGAGAGGACA+AGG + chr1_4:55870302-55870321 None:intergenic 40.0%
AAGGAGAAGATGCACAAGAA+TGG - chr1_4:55870430-55870449 Msa0171230:intron 40.0%
AGGAGAAGATGCACAAGAAT+GGG - chr1_4:55870431-55870450 Msa0171230:intron 40.0%
ACAAGAATGGGAGTGGATAA+TGG - chr1_4:55870443-55870462 Msa0171230:intron 40.0%
! GAAACATTTGGGTTTGAACC+TGG - chr1_4:55870503-55870522 Msa0171230:intron 40.0%
GAGATATGCAGACGAGTTTA+AGG - chr1_4:55870553-55870572 Msa0171230:intron 40.0%
AGAACATTGAGGGTGAATAC+TGG - chr1_4:55870657-55870676 Msa0171230:intron 40.0%
GAGTCCTACTGAAGAAATTG+AGG - chr1_4:55870691-55870710 Msa0171230:intron 40.0%
GTGACCTCAATTTCTTCAGT+AGG + chr1_4:55870698-55870717 None:intergenic 40.0%
TAAGGAAGGGTCATGTACAA+AGG + chr1_4:55870776-55870795 None:intergenic 40.0%
! ATCTGGAAACTGGGAGTTTT+GGG - chr1_4:55870837-55870856 Msa0171230:intron 40.0%
! GAAACTTGACTAGACTTGCT+AGG + chr1_4:55870872-55870891 None:intergenic 40.0%
AGCAGTACATAAAATCTGGG+TGG - chr1_4:55870903-55870922 Msa0171230:intron 40.0%
GTAGTGCCATGGTTGTATAT+AGG - chr1_4:55870995-55871014 Msa0171230:intron 40.0%
TGTCCTTACCCAACAAAATG+AGG + chr1_4:55871032-55871051 None:intergenic 40.0%
TATGCAATTGATTGTGCTCC+GGG - chr1_4:55871425-55871444 Msa0171230:intron 40.0%
TATGCACATGGACAAGCATA+AGG + chr1_4:55871551-55871570 None:intergenic 40.0%
GTGAGAATAAAGAACCCATC+TGG - chr1_4:55871671-55871690 Msa0171230:intron 40.0%
CAAAAGGATGTCAACCAGAT+GGG + chr1_4:55871688-55871707 None:intergenic 40.0%
!! TTAATTTTGGGTGCAGCATG+TGG - chr1_4:55871828-55871847 Msa0171230:CDS 40.0%
AGATGCATGCAAATTGGAAG+AGG - chr1_4:55871924-55871943 Msa0171230:CDS 40.0%
TTCAGGTAACTGCTTTCTCA+TGG + chr1_4:55871950-55871969 None:intergenic 40.0%
GATCAAATGAACTTGTGCAG+TGG + chr1_4:55872027-55872046 None:intergenic 40.0%
CTGCACAAGTTCATTTGATC+AGG - chr1_4:55872027-55872046 Msa0171230:CDS 40.0%
TTTGATCAGGATGTTGCAGA+TGG - chr1_4:55872040-55872059 Msa0171230:CDS 40.0%
TTGATCAGGATGTTGCAGAT+GGG - chr1_4:55872041-55872060 Msa0171230:CDS 40.0%
TATCATGTGAAGTGAGAGAC+AGG + chr1_4:55872075-55872094 None:intergenic 40.0%
ATCGATATCTTCACATTGGG+TGG - chr1_4:55872161-55872180 Msa0171230:intron 40.0%
TCGATATCTTCACATTGGGT+GGG - chr1_4:55872162-55872181 Msa0171230:intron 40.0%
TATTGCTATAGAGCTGTACC+GGG - chr1_4:55872514-55872533 Msa0171230:CDS 40.0%
! TTGTGGAAAAGACGGTCTTT+TGG - chr1_4:55872667-55872686 Msa0171230:intron 40.0%
GTAGAACGGGATAACGTTTA+TGG - chr1_4:55872731-55872750 Msa0171230:intron 40.0%
TTAAGAAAAGGGGGTTACTC+AGG - chr1_4:55873285-55873304 Msa0171230:intron 40.0%
GCTGACATTTCTTAAAGCCT+TGG - chr1_4:55873382-55873401 Msa0171230:intron 40.0%
! TTCTTAAAGCCTTGGCTCTT+AGG - chr1_4:55873390-55873409 Msa0171230:intron 40.0%
ACAATAAGCTCTTGCATGAG+AGG + chr1_4:55873450-55873469 None:intergenic 40.0%
ATAAGCCTGTTTACTGTGTG+CGG - chr1_4:55873490-55873509 Msa0171230:CDS 40.0%
TCAAAGCCTCGACAGAAAAA+TGG + chr1_4:55873564-55873583 None:intergenic 40.0%
GTTAGGTGGATGTCAAAGAA+TGG - chr1_4:55873605-55873624 Msa0171230:CDS 40.0%
CAGAATGGACAATAAGGAAC+AGG + chr1_4:55873844-55873863 None:intergenic 40.0%
AGGCTTCAGAATGGACAATA+AGG + chr1_4:55873850-55873869 None:intergenic 40.0%
TCAAATGACCAACCAATGCA+AGG + chr1_4:55873870-55873889 None:intergenic 40.0%
!! TGCATTGGTTGGTCATTTGA+AGG - chr1_4:55873870-55873889 Msa0171230:CDS 40.0%
! TTGGTGACTAACACAGATTG+TGG + chr1_4:55873896-55873915 None:intergenic 40.0%
TTGAGGGTCACTCATAAATC+AGG + chr1_4:55874184-55874203 None:intergenic 40.0%
TTTATGAGTGACCCTCAAAC+TGG - chr1_4:55874186-55874205 Msa0171230:CDS 40.0%
!! GTTTTGATGCTACCAGTGAA+AGG - chr1_4:55874401-55874420 Msa0171230:CDS 40.0%
TCTATCTGTGAAACAGTGAC+AGG + chr1_4:55874470-55874489 None:intergenic 40.0%
CACAGATAGATATGCTTGCT+TGG - chr1_4:55874480-55874499 Msa0171230:intron 40.0%
AGCAATTGTGTTCATGCTCT+TGG - chr1_4:55874512-55874531 Msa0171230:intron 40.0%
!! ATTCTTGTTGAGGCATTGGA+AGG - chr1_4:55874580-55874599 Msa0171230:intron 40.0%
AGATGGGCAAAATTAGACCT+TGG - chr1_4:55874622-55874641 Msa0171230:intron 40.0%
GATGGGCAAAATTAGACCTT+GGG - chr1_4:55874623-55874642 Msa0171230:intron 40.0%
CTCATTATTCACATTGCTCC+TGG + chr1_4:55874734-55874753 None:intergenic 40.0%
CAGGAGCAATGTGAATAATG+AGG - chr1_4:55874732-55874751 Msa0171230:intron 40.0%
GAGCAATGTGAATAATGAGG+CGG - chr1_4:55874735-55874754 Msa0171230:intron 40.0%
AATTCACAAACAGGGACACT+CGG + chr1_4:55874916-55874935 None:intergenic 40.0%
! ACTGGGGTAGAAGGTATAAT+TGG + chr1_4:55875285-55875304 None:intergenic 40.0%
! TTAATAGTGCTGGAAGGTTG+GGG + chr1_4:55875426-55875445 None:intergenic 40.0%
! CTTAATAGTGCTGGAAGGTT+GGG + chr1_4:55875427-55875446 None:intergenic 40.0%
!! TTAGCCTTAATAGTGCTGGA+AGG + chr1_4:55875432-55875451 None:intergenic 40.0%
!! GTTCTTAGCCTTAATAGTGC+TGG + chr1_4:55875436-55875455 None:intergenic 40.0%
CACTATTAAGGCTAAGAACG+AGG - chr1_4:55875437-55875456 Msa0171230:intron 40.0%
AGAACGAGGATAATCATGAG+AGG - chr1_4:55875451-55875470 Msa0171230:intron 40.0%
GACAATGCAAGAGCTGTTAA+CGG - chr1_4:55875504-55875523 Msa0171230:intron 40.0%
GTTAACGGAAACATCTCTTG+TGG - chr1_4:55875519-55875538 Msa0171230:intron 40.0%
AGCACAACTCCAAATTCCAA+AGG + chr1_4:55875615-55875634 None:intergenic 40.0%
! GAATTTGGAGTTGTGCTTTC+TGG - chr1_4:55875618-55875637 Msa0171230:intron 40.0%
! TTGTGCTTTCTGGAAAGTCA+TGG - chr1_4:55875628-55875647 Msa0171230:intron 40.0%
! TTCCAAAGGGTGCGTATATT+TGG - chr1_4:55875670-55875689 Msa0171230:intron 40.0%
! CTCACCTATTTTCCAGTTCA+TGG - chr1_4:55876076-55876095 Msa0171230:intron 40.0%
GAATGAACAATGTCCATCTC+AGG + chr1_4:55876193-55876212 None:intergenic 40.0%
GATGGACATTGTTCATTCTC+AGG - chr1_4:55876195-55876214 Msa0171230:intron 40.0%
TGTTCATTCTCAGGCCATTA+TGG - chr1_4:55876204-55876223 Msa0171230:intron 40.0%
GTTCATTCTCAGGCCATTAT+GGG - chr1_4:55876205-55876224 Msa0171230:intron 40.0%
TTGGGTGACTTATTTCCTGT+CGG - chr1_4:55876324-55876343 Msa0171230:intron 40.0%
AAGTCGCCGAGTTATTCAAT+TGG - chr1_4:55876431-55876450 Msa0171230:intron 40.0%
!! TAAATCTTGGTTTTCCTCCC+AGG - chr1_4:55876487-55876506 Msa0171230:intron 40.0%
! CTCCCTTGGATTATTTTCCA+AGG + chr1_4:55876516-55876535 None:intergenic 40.0%
CTTGGAAAATAATCCAAGGG+AGG - chr1_4:55876514-55876533 Msa0171230:intron 40.0%
AGCAACAAAATGCTGGGATA+TGG - chr1_4:55876553-55876572 Msa0171230:intron 40.0%
CAGTTTAAGCTGGGAAGAAA+AGG - chr1_4:55876608-55876627 Msa0171230:intron 40.0%
CAAACATTTCGATGCCATCA+AGG + chr1_4:55876661-55876680 None:intergenic 40.0%
! CTTGATGGCATCGAAATGTT+TGG - chr1_4:55876659-55876678 Msa0171230:intron 40.0%
TAACCCTTTGCAGCTAATAC+TGG - chr1_4:55876802-55876821 Msa0171230:intron 40.0%
ACACCAGTATTAGCTGCAAA+GGG + chr1_4:55876808-55876827 None:intergenic 40.0%
AACACCAGTATTAGCTGCAA+AGG + chr1_4:55876809-55876828 None:intergenic 40.0%
! TGCAGCTAATACTGGTGTTA+AGG - chr1_4:55876810-55876829 Msa0171230:intron 40.0%
TCACAAACAATGCATGCTCT+TGG - chr1_4:55876916-55876935 Msa0171230:intron 40.0%
! AGCAACTAAAGCATTTGCTC+GGG - chr1_4:55876982-55877001 Msa0171230:intron 40.0%
ATGAAAGAGTCGTAGCAAGA+TGG + chr1_4:55877041-55877060 None:intergenic 40.0%
TCATATACAACCTGCCAAGA+AGG - chr1_4:55877248-55877267 Msa0171230:intron 40.0%
AGTATTTGCTCTCATGTACC+AGG + chr1_4:55877422-55877441 None:intergenic 40.0%
GTCGAGTTTGTCATGAATAC+TGG - chr1_4:55877629-55877648 Msa0171230:intron 40.0%
TCTTACTGACAATAAGCCAG+CGG - chr1_4:55877828-55877847 Msa0171230:intron 40.0%
AAATAATCGATCACCTAGGG+TGG + chr1_4:55877907-55877926 None:intergenic 40.0%
ACCCTAGGTGATCGATTATT+TGG - chr1_4:55877906-55877925 Msa0171230:intron 40.0%
GTCCAAATAATCGATCACCT+AGG + chr1_4:55877911-55877930 None:intergenic 40.0%
! TTCGTCCAACCTTAGTCTTT+GGG - chr1_4:55877999-55878018 Msa0171230:intron 40.0%
GGGAAAAAACCCAAAGACTA+AGG + chr1_4:55878011-55878030 None:intergenic 40.0%
AAGAGAAACCGGGTTTGATG+AGG - chr1_4:55866144-55866163 Msa0171230:three_prime_UTR 45.0%
AGAGAAACCGGGTTTGATGA+GGG - chr1_4:55866145-55866164 Msa0171230:three_prime_UTR 45.0%
GGTGTGTAACAGTCAAACGA+TGG - chr1_4:55866207-55866226 Msa0171230:three_prime_UTR 45.0%
TAAGTCACGCAGAGCCTATA+AGG - chr1_4:55867312-55867331 Msa0171230:intron 45.0%
GTGCGCTAGTTAACTAATGC+AGG - chr1_4:55867334-55867353 Msa0171230:intron 45.0%
GCGCTAGTTAACTAATGCAG+GGG - chr1_4:55867336-55867355 Msa0171230:intron 45.0%
TCTCAGAAGCCAAACCAAAC+TGG - chr1_4:55867881-55867900 Msa0171230:CDS 45.0%
!! CAAGGTTTGGGTTGATGTCA+GGG + chr1_4:55867928-55867947 None:intergenic 45.0%
!! TCAAGGTTTGGGTTGATGTC+AGG + chr1_4:55867929-55867948 None:intergenic 45.0%
AACTCTCTGGCTGTTCAGAT+TGG - chr1_4:55868895-55868914 Msa0171230:CDS 45.0%
TTGTACAGGGAAGACGAATC+AGG - chr1_4:55869088-55869107 Msa0171230:CDS 45.0%
TGCTTATTGCCCTTTGCATG+AGG - chr1_4:55869118-55869137 Msa0171230:CDS 45.0%
CCATCAATGACCTCATGCAA+AGG + chr1_4:55869131-55869150 None:intergenic 45.0%
CCTTTGCATGAGGTCATTGA+TGG - chr1_4:55869128-55869147 Msa0171230:CDS 45.0%
! TGATTTTCCGTCAGTTCCAC+CGG - chr1_4:55869188-55869207 Msa0171230:CDS 45.0%
GTATATGACTCAAAACCCGG+TGG + chr1_4:55869207-55869226 None:intergenic 45.0%
GAATCACAGTCAACTCAGGT+TGG - chr1_4:55869312-55869331 Msa0171230:CDS 45.0%
!! CAGTCAACTCAGGTTGGAAA+TGG - chr1_4:55869318-55869337 Msa0171230:CDS 45.0%
! AACCATGGAAAGTGCGATAG+CGG - chr1_4:55869399-55869418 Msa0171230:CDS 45.0%
TTTAGGAAGACAAGGTCTCG+AGG + chr1_4:55869588-55869607 None:intergenic 45.0%
TCGAGACCTTGTCTTCCTAA+AGG - chr1_4:55869587-55869606 Msa0171230:CDS 45.0%
! AGGACTCCTTTAGGAAGACA+AGG + chr1_4:55869596-55869615 None:intergenic 45.0%
TCTTCAGTGGGGTAGAAAAC+AGG + chr1_4:55870064-55870083 None:intergenic 45.0%
! TGTTTTCTACCCCACTGAAG+AGG - chr1_4:55870063-55870082 Msa0171230:CDS 45.0%
GATTCCATATGGTTCAGCTC+TGG + chr1_4:55870246-55870265 None:intergenic 45.0%
ATGAACGTGGGGGAACAATA+CGG + chr1_4:55870271-55870290 None:intergenic 45.0%
! TTTTCCTTGAGAGGACAAGG+GGG + chr1_4:55870299-55870318 None:intergenic 45.0%
AATTCGCTACTCGTGTTCAG+AGG - chr1_4:55870339-55870358 Msa0171230:intron 45.0%
ACTCAGGGACAAAGAAGTCA+AGG - chr1_4:55870384-55870403 Msa0171230:intron 45.0%
AAGATGCACAAGAATGGGAG+TGG - chr1_4:55870436-55870455 Msa0171230:intron 45.0%
ACTGGAACAGAACCTAATGC+AGG - chr1_4:55870467-55870486 Msa0171230:intron 45.0%
CCTTCTGTGGAGAACATTGA+GGG - chr1_4:55870647-55870666 Msa0171230:intron 45.0%
ACATTGAGGGTGAATACTGG+CGG - chr1_4:55870660-55870679 Msa0171230:intron 45.0%
TATGGAGCTGATCTGGAAAC+TGG - chr1_4:55870827-55870846 Msa0171230:intron 45.0%
ATGGAGCTGATCTGGAAACT+GGG - chr1_4:55870828-55870847 Msa0171230:intron 45.0%
! GATCTGGAAACTGGGAGTTT+TGG - chr1_4:55870836-55870855 Msa0171230:intron 45.0%
TCATAAGAGAGCAGAGATCC+TGG + chr1_4:55870953-55870972 None:intergenic 45.0%
!! TATCTGGTGTTGTAGTGCCA+TGG - chr1_4:55870984-55871003 Msa0171230:intron 45.0%
GAAAGACGTGCTAGAAGACA+AGG + chr1_4:55871064-55871083 None:intergenic 45.0%
CAGCAGGTATAAGCATGAGT+TGG + chr1_4:55871099-55871118 None:intergenic 45.0%
CAACTCATGCTTATACCTGC+TGG - chr1_4:55871097-55871116 Msa0171230:intron 45.0%
TTGCTAAGAATGTGCCACAG+CGG + chr1_4:55871264-55871283 None:intergenic 45.0%
TCTACATGCTTGAGGAATCC+CGG + chr1_4:55871446-55871465 None:intergenic 45.0%
TGAGATGGTCTACATGCTTG+AGG + chr1_4:55871454-55871473 None:intergenic 45.0%
ATATGCAACACACCCTTCGA+GGG - chr1_4:55871619-55871638 Msa0171230:intron 45.0%
GCAAAAGGATGTCAACCAGA+TGG + chr1_4:55871689-55871708 None:intergenic 45.0%
ATCTGGGTGCTCCAAAAATG+TGG - chr1_4:55871884-55871903 Msa0171230:CDS 45.0%
GGTGCTCCAAAAATGTGGTA+TGG - chr1_4:55871889-55871908 Msa0171230:CDS 45.0%
! GGGACACCATACCACATTTT+TGG + chr1_4:55871898-55871917 None:intergenic 45.0%
!! ACCTGACTTGCTTCATAAGC+TGG - chr1_4:55871984-55872003 Msa0171230:CDS 45.0%
ACCAGCTTATGAAGCAAGTC+AGG + chr1_4:55871988-55872007 None:intergenic 45.0%
CGATATCTTCACATTGGGTG+GGG - chr1_4:55872163-55872182 Msa0171230:intron 45.0%
CCTATAAACTGGCACACCTT+TGG + chr1_4:55872369-55872388 None:intergenic 45.0%
! CCAAAGGTGTGCCAGTTTAT+AGG - chr1_4:55872366-55872385 Msa0171230:intron 45.0%
TATAGGTGTGTCCAAAACCC+TGG - chr1_4:55872383-55872402 Msa0171230:intron 45.0%
ATAGGTGTGTCCAAAACCCT+GGG - chr1_4:55872384-55872403 Msa0171230:intron 45.0%
! GAATAAAGTCCCCAGGGTTT+TGG + chr1_4:55872397-55872416 None:intergenic 45.0%
ACAATTGAACCCAGAGTGGT+AGG + chr1_4:55872435-55872454 None:intergenic 45.0%
TACCACTCTGGGTTCAATTG+TGG - chr1_4:55872434-55872453 Msa0171230:intron 45.0%
TTAATGTAGCTCCCGTTGAC+TGG - chr1_4:55872477-55872496 Msa0171230:CDS 45.0%
CAGCAAAGTAATCTCCCACT+GGG + chr1_4:55872609-55872628 None:intergenic 45.0%
TCAGCAAAGTAATCTCCCAC+TGG + chr1_4:55872610-55872629 None:intergenic 45.0%
TCCCAAAAGGCTCTTAAGTG+AGG - chr1_4:55872980-55872999 Msa0171230:intron 45.0%
! CCCTCACTTAAGAGCCTTTT+GGG + chr1_4:55872984-55873003 None:intergenic 45.0%
CCCAAAAGGCTCTTAAGTGA+GGG - chr1_4:55872981-55873000 Msa0171230:intron 45.0%
CCAAAAGGCTCTTAAGTGAG+GGG - chr1_4:55872982-55873001 Msa0171230:intron 45.0%
GCTTGAACTGTAAACAACGC+AGG - chr1_4:55873242-55873261 Msa0171230:intron 45.0%
! TTAAAGCCTTGGCTCTTAGG+TGG - chr1_4:55873393-55873412 Msa0171230:intron 45.0%
GCACACAGTAAACAGGCTTA+TGG + chr1_4:55873491-55873510 None:intergenic 45.0%
TGAAACCGCACACAGTAAAC+AGG + chr1_4:55873498-55873517 None:intergenic 45.0%
GTGTGCGGTTTCAACTTCAT+TGG - chr1_4:55873505-55873524 Msa0171230:CDS 45.0%
TTCATTGGAAGTAAGGGCAG+TGG - chr1_4:55873520-55873539 Msa0171230:CDS 45.0%
AAAGGAATGAAGGTGGAGAG+AGG - chr1_4:55873718-55873737 Msa0171230:intron 45.0%
AAGGAATGAAGGTGGAGAGA+GGG - chr1_4:55873719-55873738 Msa0171230:intron 45.0%
!! TCCATTCTGAAGCCTTGCAT+TGG - chr1_4:55873855-55873874 Msa0171230:CDS 45.0%
ACCAATGCAAGGCTTCAGAA+TGG + chr1_4:55873859-55873878 None:intergenic 45.0%
!! TTCTGAAGCCTTGCATTGGT+TGG - chr1_4:55873859-55873878 Msa0171230:CDS 45.0%
CTAGAACCAGCAAGCATATG+AGG + chr1_4:55875093-55875112 None:intergenic 45.0%
!! TCACAGAAGCATCTGTCACA+GGG + chr1_4:55875164-55875183 None:intergenic 45.0%
TGTGACAGATGCTTCTGTGA+CGG - chr1_4:55875164-55875183 Msa0171230:CDS 45.0%
GAAAGATCTACTGGGGTAGA+AGG + chr1_4:55875294-55875313 None:intergenic 45.0%
CATTCCAGCTTCTACAAGAG+CGG - chr1_4:55875353-55875372 Msa0171230:CDS 45.0%
! TAATAGTGCTGGAAGGTTGG+GGG + chr1_4:55875425-55875444 None:intergenic 45.0%
! CCTTAATAGTGCTGGAAGGT+TGG + chr1_4:55875428-55875447 None:intergenic 45.0%
CCAACCTTCCAGCACTATTA+AGG - chr1_4:55875425-55875444 Msa0171230:intron 45.0%
CCTTTCTGACGGGAATTGTT+TGG + chr1_4:55875546-55875565 None:intergenic 45.0%
CCAAACAATTCCCGTCAGAA+AGG - chr1_4:55875543-55875562 Msa0171230:intron 45.0%
AATACGAGGACCTTTCTGAC+GGG + chr1_4:55875556-55875575 None:intergenic 45.0%
CAATACGAGGACCTTTCTGA+CGG + chr1_4:55875557-55875576 None:intergenic 45.0%
GAAAGGTCCTCGTATTGCAA+AGG - chr1_4:55875560-55875579 Msa0171230:intron 45.0%
CTCGTATTGCAAAGGTTGTC+CGG - chr1_4:55875568-55875587 Msa0171230:intron 45.0%
CAACTGCAATGTTGAGCCTT+TGG - chr1_4:55875596-55875615 Msa0171230:intron 45.0%
AAAGTCATGGTGCAGCATTC+AGG - chr1_4:55875641-55875660 Msa0171230:intron 45.0%
GACCAAATATACGCACCCTT+TGG + chr1_4:55875675-55875694 None:intergenic 45.0%
GAAATTCTTGATGCTGGACG+TGG - chr1_4:55875834-55875853 Msa0171230:intron 45.0%
ACGTGGTTCGCCTCTATTTA+TGG - chr1_4:55875851-55875870 Msa0171230:intron 45.0%
ACAATGTCCATCTCAGGGAT+GGG + chr1_4:55876187-55876206 None:intergenic 45.0%
AACAATGTCCATCTCAGGGA+TGG + chr1_4:55876188-55876207 None:intergenic 45.0%
! ATTTTCCAAGGAAACCTGGG+AGG + chr1_4:55876504-55876523 None:intergenic 45.0%
GCTTTAGTTGCTTCACCCTT+GGG + chr1_4:55876974-55876993 None:intergenic 45.0%
TGCTTTAGTTGCTTCACCCT+TGG + chr1_4:55876975-55876994 None:intergenic 45.0%
AAAGAGTCGTAGCAAGATGG+TGG + chr1_4:55877038-55877057 None:intergenic 45.0%
AACCTGCCAAGAAGGAAAGT+GGG - chr1_4:55877256-55877275 Msa0171230:intron 45.0%
CAAACTCCCACTTTCCTTCT+TGG + chr1_4:55877265-55877284 None:intergenic 45.0%
!!! CGTGTCACTTGTTTTACGTC+TGG - chr1_4:55877363-55877382 Msa0171230:intron 45.0%
GTTTACAGCCCTAAAACACC+AGG + chr1_4:55877476-55877495 None:intergenic 45.0%
ATGAATACTGGGACTTCCGT+CGG - chr1_4:55877641-55877660 Msa0171230:intron 45.0%
! CTTCGTCCAACCTTAGTCTT+TGG - chr1_4:55877998-55878017 Msa0171230:intron 45.0%
TCTATAACCTCCATTCAGGC+GGG + chr1_4:55878033-55878052 None:intergenic 45.0%
CTCTATAACCTCCATTCAGG+CGG + chr1_4:55878034-55878053 None:intergenic 45.0%
! ATTCTGAAAGGCAAGGCTAC+CGG - chr1_4:55878187-55878206 Msa0171230:intron 45.0%
!! TATTAATTAAATGTTAATAT+AGG - chr1_4:55869824-55869843 Msa0171230:CDS 5.0%
!!! AAAATTTTACAATTTAATAA+TGG + chr1_4:55871393-55871412 None:intergenic 5.0%
!! TTTAATAGTATTATAATTAT+AGG + chr1_4:55873095-55873114 None:intergenic 5.0%
!! TAATTATAATACTATTAAAA+AGG - chr1_4:55873096-55873115 Msa0171230:intron 5.0%
CCAACTTCCCTCATCAAACC+CGG + chr1_4:55866155-55866174 None:intergenic 50.0%
CGGGTTTGATGAGGGAAGTT+GGG - chr1_4:55866153-55866172 Msa0171230:three_prime_UTR 50.0%
TTGATGAGGGAAGTTGGGCT+TGG - chr1_4:55866158-55866177 Msa0171230:three_prime_UTR 50.0%
TGGGTGCGAGCAAAATGTGT+TGG - chr1_4:55867377-55867396 Msa0171230:intron 50.0%
GGGTGCGAGCAAAATGTGTT+GGG - chr1_4:55867378-55867397 Msa0171230:intron 50.0%
! GATTTTCCGTCAGTTCCACC+GGG - chr1_4:55869189-55869208 Msa0171230:CDS 50.0%
TCAAAACCCGGTGGAACTGA+CGG + chr1_4:55869198-55869217 None:intergenic 50.0%
GATCCCTTCGACGAAGAAGA+TGG - chr1_4:55869373-55869392 Msa0171230:CDS 50.0%
AACCGCTATCGCACTTTCCA+TGG + chr1_4:55869404-55869423 None:intergenic 50.0%
! AAAGTGCGATAGCGGTTCAG+AGG - chr1_4:55869407-55869426 Msa0171230:CDS 50.0%
! AGGAAGACGCTGATTGTGAG+CGG - chr1_4:55869427-55869446 Msa0171230:CDS 50.0%
CTTCCTAAAGGAGTCCTCAG+AGG - chr1_4:55869599-55869618 Msa0171230:CDS 50.0%
! CATCCTCTGAGGACTCCTTT+AGG + chr1_4:55869605-55869624 None:intergenic 50.0%
TGACAATCGAAGTTTCGGGC+AGG - chr1_4:55869985-55870004 Msa0171230:CDS 50.0%
TGTGGTCTACGAGCATCTTC+TGG + chr1_4:55870028-55870047 None:intergenic 50.0%
AAGAGCGAGACCTCTTCAGT+GGG + chr1_4:55870076-55870095 None:intergenic 50.0%
GTATTGTTCCCCCACGTTCA+TGG - chr1_4:55870270-55870289 Msa0171230:intron 50.0%
AAGGGGGTTTCCATGAACGT+GGG + chr1_4:55870283-55870302 None:intergenic 50.0%
! ATGGGAGTGGATAATGGCAC+TGG - chr1_4:55870449-55870468 Msa0171230:intron 50.0%
ACCTGGCCCAGAATTTACCT+TGG - chr1_4:55870520-55870539 Msa0171230:intron 50.0%
TCCAAGGTAAATTCTGGGCC+AGG + chr1_4:55870524-55870543 None:intergenic 50.0%
TGGTACCTTAGAGCCTTCTG+TGG - chr1_4:55870634-55870653 Msa0171230:intron 50.0%
GTTCTCCACAGAAGGCTCTA+AGG + chr1_4:55870642-55870661 None:intergenic 50.0%
GCCTTCTGTGGAGAACATTG+AGG - chr1_4:55870646-55870665 Msa0171230:intron 50.0%
CCCTCAATGTTCTCCACAGA+AGG + chr1_4:55870650-55870669 None:intergenic 50.0%
GGTGCTTTATGGAGCTGATC+TGG - chr1_4:55870820-55870839 Msa0171230:intron 50.0%
!!! GAAACTGGGAGTTTTGGGAG+TGG - chr1_4:55870842-55870861 Msa0171230:intron 50.0%
CATATGCAACACACCCTTCG+AGG - chr1_4:55871618-55871637 Msa0171230:intron 50.0%
TAGGTGTGTCCAAAACCCTG+GGG - chr1_4:55872385-55872404 Msa0171230:intron 50.0%
AGCCACAATTGAACCCAGAG+TGG + chr1_4:55872439-55872458 None:intergenic 50.0%
TTGTGGCTTCAACTGTGCTG+AGG - chr1_4:55872451-55872470 Msa0171230:intron 50.0%
TCCATGTGGAAGCCAGTCAA+CGG + chr1_4:55872492-55872511 None:intergenic 50.0%
GTCCACGCTTCAATCCCAAA+AGG - chr1_4:55872967-55872986 Msa0171230:intron 50.0%
!!! AGCCTTTTGGGATTGAAGCG+TGG + chr1_4:55872972-55872991 None:intergenic 50.0%
! CCCCTCACTTAAGAGCCTTT+TGG + chr1_4:55872985-55873004 None:intergenic 50.0%
GGGGTTACTCAGGATCAAAC+TGG - chr1_4:55873295-55873314 Msa0171230:intron 50.0%
GGATCAAACTGGCAACCACT+TGG - chr1_4:55873306-55873325 Msa0171230:intron 50.0%
AACTGGCAACCACTTGGTCA+TGG - chr1_4:55873312-55873331 Msa0171230:intron 50.0%
ACAAGACAGCCATGACCAAG+TGG + chr1_4:55873324-55873343 None:intergenic 50.0%
CACTTGACAACTGTAGACGC+TGG + chr1_4:55873363-55873382 None:intergenic 50.0%
AGGAATGAAGGTGGAGAGAG+GGG - chr1_4:55873720-55873739 Msa0171230:intron 50.0%
TCACTTGTCTTCATTGGGGG+TGG - chr1_4:55873927-55873946 Msa0171230:CDS 50.0%
TCCATCTCAACACGTGCCTA+GGG + chr1_4:55874325-55874344 None:intergenic 50.0%
TTGAGATGGAGCGGGTAAGA+AGG - chr1_4:55874335-55874354 Msa0171230:intron 50.0%
TGAGATGGAGCGGGTAAGAA+GGG - chr1_4:55874336-55874355 Msa0171230:intron 50.0%
GATGCTGCATTCCCTTTCAC+TGG + chr1_4:55874416-55874435 None:intergenic 50.0%
GGCAAAATTAGACCTTGGGC+TGG - chr1_4:55874627-55874646 Msa0171230:intron 50.0%
CCTGGAAGAATGAGACGAGT+CGG + chr1_4:55874716-55874735 None:intergenic 50.0%
CTCCATACCTACGTGTGAGA+TGG - chr1_4:55874837-55874856 Msa0171230:CDS 50.0%
AGCCATCTCACACGTAGGTA+TGG + chr1_4:55874842-55874861 None:intergenic 50.0%
! CGATTAGCCATCTCACACGT+AGG + chr1_4:55874847-55874866 None:intergenic 50.0%
CGGCGGTGATAAAGCATATG+AGG + chr1_4:55874953-55874972 None:intergenic 50.0%
TCATCTCCGTGTTGAGCTAG+CGG + chr1_4:55874973-55874992 None:intergenic 50.0%
GTGGTTCCTCATATGCTTGC+TGG - chr1_4:55875084-55875103 Msa0171230:CDS 50.0%
!! AGAAGCATCTGTCACAGGGA+TGG + chr1_4:55875160-55875179 None:intergenic 50.0%
!! GTCACAGAAGCATCTGTCAC+AGG + chr1_4:55875165-55875184 None:intergenic 50.0%
GTGACAGATGCTTCTGTGAC+GGG - chr1_4:55875165-55875184 Msa0171230:CDS 50.0%
GGGTGAGAAGGATGCTATTG+CGG - chr1_4:55875185-55875204 Msa0171230:CDS 50.0%
TTACTGGTGCAGAATCAGCG+AGG - chr1_4:55875328-55875347 Msa0171230:CDS 50.0%
CGGACAACCTTTGCAATACG+AGG + chr1_4:55875570-55875589 None:intergenic 50.0%
! CAACATTGCAGTTGATGCGC+CGG + chr1_4:55875590-55875609 None:intergenic 50.0%
CACACGGTAAAGCCATGAAC+TGG + chr1_4:55876091-55876110 None:intergenic 50.0%
CATCTCAGGGATGGGTAAAG+AGG + chr1_4:55876179-55876198 None:intergenic 50.0%
CTCTTTACCCATCCCTGAGA+TGG - chr1_4:55876177-55876196 Msa0171230:intron 50.0%
CGCCGAGTTATTCAATTGGC+TGG - chr1_4:55876435-55876454 Msa0171230:intron 50.0%
! GTTTTCCTCCCAGGTTTCCT+TGG - chr1_4:55876496-55876515 Msa0171230:intron 50.0%
CAGCAGGATGTAAAGGAGGA+AGG + chr1_4:55876634-55876653 None:intergenic 50.0%
CTTCCTCCTTTACATCCTGC+TGG - chr1_4:55876632-55876651 Msa0171230:intron 50.0%
AAAAAGTAGGGGCTGCCCAA+GGG - chr1_4:55876956-55876975 Msa0171230:intron 50.0%
CAACCTGCCAAGAAGGAAAG+TGG - chr1_4:55877255-55877274 Msa0171230:intron 50.0%
GAAGGAAAGTGGGAGTTTGC+TGG - chr1_4:55877266-55877285 Msa0171230:intron 50.0%
CTCCACCATTTACACTGGTC+TGG + chr1_4:55877693-55877712 None:intergenic 50.0%
CAGACCAGTGTAAATGGTGG+AGG - chr1_4:55877691-55877710 Msa0171230:intron 50.0%
! ACCAGTGTAAATGGTGGAGG+TGG - chr1_4:55877694-55877713 Msa0171230:intron 50.0%
TCCACCTCCACCATTTACAC+TGG + chr1_4:55877698-55877717 None:intergenic 50.0%
GTGGAGGTGGAAGTGATCAA+GGG - chr1_4:55877707-55877726 Msa0171230:intron 50.0%
TGGAGGTGGAAGTGATCAAG+GGG - chr1_4:55877708-55877727 Msa0171230:intron 50.0%
!! GTGGGTGTGTGCTGATTCAT+GGG + chr1_4:55877736-55877755 None:intergenic 50.0%
ATGAATCAGCACACACCCAC+CGG - chr1_4:55877736-55877755 Msa0171230:intron 50.0%
CTTCAGTACTGCAACAGCTC+CGG + chr1_4:55877758-55877777 None:intergenic 50.0%
TCACAAAACCCAACCACCCT+AGG - chr1_4:55877891-55877910 Msa0171230:intron 50.0%
ATCGATCACCTAGGGTGGTT+GGG + chr1_4:55877902-55877921 None:intergenic 50.0%
AATCGATCACCTAGGGTGGT+TGG + chr1_4:55877903-55877922 None:intergenic 50.0%
TATAACCTCCATTCAGGCGG+GGG + chr1_4:55878031-55878050 None:intergenic 50.0%
CTATAACCTCCATTCAGGCG+GGG + chr1_4:55878032-55878051 None:intergenic 50.0%
TGGACTCTAGGTGCCTATGT+TGG - chr1_4:55878284-55878303 Msa0171230:CDS 50.0%
CCGGGTTTGATGAGGGAAGT+TGG - chr1_4:55866152-55866171 Msa0171230:three_prime_UTR 55.0%
AGTTGGGCTTGGCCCAAATC+AGG - chr1_4:55866169-55866188 Msa0171230:three_prime_UTR 55.0%
TGATGGGGACCGAGCTTATG+AGG - chr1_4:55869145-55869164 Msa0171230:CDS 55.0%
AGATGCACTTGTCGTCGTCG+AGG + chr1_4:55869292-55869311 None:intergenic 55.0%
GGCAATCTGGACATCCTCTG+AGG + chr1_4:55869616-55869635 None:intergenic 55.0%
TCGGGCAGGTCATTGCTAGA+TGG - chr1_4:55869999-55870018 Msa0171230:CDS 55.0%
AGAGCGAGACCTCTTCAGTG+GGG + chr1_4:55870075-55870094 None:intergenic 55.0%
CAAGAGCGAGACCTCTTCAG+TGG + chr1_4:55870077-55870096 None:intergenic 55.0%
CTGAAGAGGTCTCGCTCTTG+TGG - chr1_4:55870077-55870096 Msa0171230:CDS 55.0%
CGCTCCAGAGCTGAACCATA+TGG - chr1_4:55870239-55870258 Msa0171230:intron 55.0%
AGGGGGTTTCCATGAACGTG+GGG + chr1_4:55870282-55870301 None:intergenic 55.0%
CAAGGGGGTTTCCATGAACG+TGG + chr1_4:55870284-55870303 None:intergenic 55.0%
GAAACCCCCTTGTCCTCTCA+AGG - chr1_4:55870292-55870311 Msa0171230:intron 55.0%
TGAGGGTGAATACTGGCGGA+TGG - chr1_4:55870664-55870683 Msa0171230:intron 55.0%
ATGGAAGGTGGGGTGAAGTC+TGG + chr1_4:55872211-55872230 None:intergenic 55.0%
TTTCCTCGAGCCTACCACTC+TGG - chr1_4:55872422-55872441 Msa0171230:intron 55.0%
TTCCTCGAGCCTACCACTCT+GGG - chr1_4:55872423-55872442 Msa0171230:intron 55.0%
CCATGTGGAAGCCAGTCAAC+GGG + chr1_4:55872491-55872510 None:intergenic 55.0%
TATAGAGCTGTACCGGGAGC+AGG - chr1_4:55872520-55872539 Msa0171230:CDS 55.0%
ATAGAGCTGTACCGGGAGCA+GGG - chr1_4:55872521-55872540 Msa0171230:CDS 55.0%
AGCTATTGCTTGGGGCTGCT+AGG - chr1_4:55872570-55872589 Msa0171230:CDS 55.0%
GCTATTGCTTGGGGCTGCTA+GGG - chr1_4:55872571-55872590 Msa0171230:CDS 55.0%
! AAGCCTTGGCTCTTAGGTGG+AGG - chr1_4:55873396-55873415 Msa0171230:intron 55.0%
TGGAAGTAAGGGCAGTGGCA+AGG - chr1_4:55873525-55873544 Msa0171230:CDS 55.0%
TCCCTAGGCACGTGTTGAGA+TGG - chr1_4:55874321-55874340 Msa0171230:intron 55.0%
CTCCATCTCAACACGTGCCT+AGG + chr1_4:55874326-55874345 None:intergenic 55.0%
AGGCACGTGTTGAGATGGAG+CGG - chr1_4:55874326-55874345 Msa0171230:intron 55.0%
AGTGACAGGCAGCAGCAGAT+AGG + chr1_4:55874456-55874475 None:intergenic 55.0%
AAGAAGTTAGGGCCAGCCCA+AGG + chr1_4:55874642-55874661 None:intergenic 55.0%
! CCGACTCGTCTCATTCTTCC+AGG - chr1_4:55874713-55874732 Msa0171230:intron 55.0%
!! TGCTTCTGTGACGGGTGAGA+AGG - chr1_4:55875173-55875192 Msa0171230:CDS 55.0%
GCGGTGCTTCGTGAAGATTC+AGG - chr1_4:55875204-55875223 Msa0171230:CDS 55.0%
GCATCCGCTCTTGTAGAAGC+TGG + chr1_4:55875360-55875379 None:intergenic 55.0%
TCTACAAGAGCGGATGCCAG+CGG - chr1_4:55875363-55875382 Msa0171230:CDS 55.0%
CTGGAAGGTTGGGGGTTTGA+AGG + chr1_4:55875417-55875436 None:intergenic 55.0%
CTGCCAGCAGGATGTAAAGG+AGG + chr1_4:55876638-55876657 None:intergenic 55.0%
AGGCTGCCAGCAGGATGTAA+AGG + chr1_4:55876641-55876660 None:intergenic 55.0%
GAAAAAGTAGGGGCTGCCCA+AGG - chr1_4:55876955-55876974 Msa0171230:intron 55.0%
CTCCCACTTTCCTTCTTGGC+AGG + chr1_4:55877261-55877280 None:intergenic 55.0%
GCTTGTGAAAGCTGCCCTTG+AGG + chr1_4:55877667-55877686 None:intergenic 55.0%
CAAGGGCAGCTTTCACAAGC+TGG - chr1_4:55877667-55877686 Msa0171230:intron 55.0%
GCTGGCCAGACCAGTGTAAA+TGG - chr1_4:55877685-55877704 Msa0171230:intron 55.0%
GGCCAGACCAGTGTAAATGG+TGG - chr1_4:55877688-55877707 Msa0171230:intron 55.0%
GGTGGAGGTGGAAGTGATCA+AGG - chr1_4:55877706-55877725 Msa0171230:intron 55.0%
!! GGTGGGTGTGTGCTGATTCA+TGG + chr1_4:55877737-55877756 None:intergenic 55.0%
AGTACTGCAACAGCTCCGGT+GGG + chr1_4:55877754-55877773 None:intergenic 55.0%
ATTGGGATCTGTTCAGCCGC+TGG + chr1_4:55877847-55877866 None:intergenic 55.0%
!!! GGTTTTTTCCCCCGCCTGAA+TGG - chr1_4:55878020-55878039 Msa0171230:intron 55.0%
! TTTTTCCCCCGCCTGAATGG+AGG - chr1_4:55878023-55878042 Msa0171230:intron 55.0%
GTCGTCGTCGAGGAACTCGT+CGG + chr1_4:55869282-55869301 None:intergenic 60.0%
GGGGGTTTCCATGAACGTGG+GGG + chr1_4:55870281-55870300 None:intergenic 60.0%
TGCAACACACCCTTCGAGGG+TGG - chr1_4:55871622-55871641 Msa0171230:intron 60.0%
GCAACACACCCTTCGAGGGT+GGG - chr1_4:55871623-55871642 Msa0171230:intron 60.0%
AGGGTGGGAGGGGATGCTAT+GGG - chr1_4:55871638-55871657 Msa0171230:intron 60.0%
AACCCAGAGTGGTAGGCTCG+AGG + chr1_4:55872428-55872447 None:intergenic 60.0%
!! CCCGTTGACTGGCTTCCACA+TGG - chr1_4:55872488-55872507 Msa0171230:CDS 60.0%
TAGAGCTGTACCGGGAGCAG+GGG - chr1_4:55872522-55872541 Msa0171230:CDS 60.0%
AAGTCTTACGCCCCTGCTCC+CGG + chr1_4:55872535-55872554 None:intergenic 60.0%
GGAAGCAGTACGAGCCCAGT+GGG - chr1_4:55872592-55872611 Msa0171230:CDS 60.0%
GGCACGTGTTGAGATGGAGC+GGG - chr1_4:55874327-55874346 Msa0171230:intron 60.0%
TCACCGCCGCTAGCTCAACA+CGG - chr1_4:55874964-55874983 Msa0171230:intron 60.0%
TCTCCGTGTTGAGCTAGCGG+CGG + chr1_4:55874970-55874989 None:intergenic 60.0%
CATCCTGCTGGCAGCCTTGA+TGG - chr1_4:55876644-55876663 Msa0171230:intron 60.0%
ATGCCATCAAGGCTGCCAGC+AGG + chr1_4:55876650-55876669 None:intergenic 60.0%
AAAGCTGCCCTTGAGGCCGA+CGG + chr1_4:55877660-55877679 None:intergenic 60.0%
CAGTACTGCAACAGCTCCGG+TGG + chr1_4:55877755-55877774 None:intergenic 60.0%
ACACACCCTTCGAGGGTGGG+AGG - chr1_4:55871626-55871645 Msa0171230:intron 65.0%
CACACCCTTCGAGGGTGGGA+GGG - chr1_4:55871627-55871646 Msa0171230:intron 65.0%
ACACCCTTCGAGGGTGGGAG+GGG - chr1_4:55871628-55871647 Msa0171230:intron 65.0%
CATCCCCTCCCACCCTCGAA+GGG + chr1_4:55871634-55871653 None:intergenic 65.0%
GAGGGTGGGAGGGGATGCTA+TGG - chr1_4:55871637-55871656 Msa0171230:intron 65.0%
GGGAAGCAGTACGAGCCCAG+TGG - chr1_4:55872591-55872610 Msa0171230:CDS 65.0%
GGGCCTCCACCTAAGAGCCA+AGG + chr1_4:55873402-55873421 None:intergenic 65.0%
TGGGACTTCCGTCGGCCTCA+AGG - chr1_4:55877649-55877668 Msa0171230:intron 65.0%
GGGACTTCCGTCGGCCTCAA+GGG - chr1_4:55877650-55877669 Msa0171230:intron 65.0%
GCATCCCCTCCCACCCTCGA+AGG + chr1_4:55871635-55871654 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 55866124 55878358 55866124 ID=Msa0171230;Name=Msa0171230
chr1_4 mRNA 55866124 55878358 55866124 ID=Msa0171230-mRNA-1;Parent=Msa0171230;Name=Msa0171230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.90|0.91|0.91|1|1|12|446|1272
chr1_4 exon 55866124 55866875 55866124 ID=Msa0171230-mRNA-1:exon:16775;Parent=Msa0171230-mRNA-1
chr1_4 exon 55867776 55867973 55867776 ID=Msa0171230-mRNA-1:exon:16774;Parent=Msa0171230-mRNA-1
chr1_4 exon 55868610 55868713 55868610 ID=Msa0171230-mRNA-1:exon:16773;Parent=Msa0171230-mRNA-1
chr1_4 exon 55868804 55870154 55868804 ID=Msa0171230-mRNA-1:exon:16772;Parent=Msa0171230-mRNA-1
chr1_4 exon 55871779 55872147 55871779 ID=Msa0171230-mRNA-1:exon:16771;Parent=Msa0171230-mRNA-1
chr1_4 exon 55872477 55872638 55872477 ID=Msa0171230-mRNA-1:exon:16770;Parent=Msa0171230-mRNA-1
chr1_4 exon 55873440 55873661 55873440 ID=Msa0171230-mRNA-1:exon:16769;Parent=Msa0171230-mRNA-1
chr1_4 exon 55873770 55874279 55873770 ID=Msa0171230-mRNA-1:exon:16768;Parent=Msa0171230-mRNA-1
chr1_4 exon 55874398 55874475 55874398 ID=Msa0171230-mRNA-1:exon:16767;Parent=Msa0171230-mRNA-1
chr1_4 exon 55874833 55874904 55874833 ID=Msa0171230-mRNA-1:exon:16766;Parent=Msa0171230-mRNA-1
chr1_4 exon 55875024 55875386 55875024 ID=Msa0171230-mRNA-1:exon:16765;Parent=Msa0171230-mRNA-1
chr1_4 exon 55878275 55878358 55878275 ID=Msa0171230-mRNA-1:exon:16764;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55878275 55878358 55878275 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55875024 55875386 55875024 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55874833 55874904 55874833 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55874398 55874475 55874398 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55873770 55874279 55873770 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55873440 55873661 55873440 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55872477 55872638 55872477 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55871779 55872147 55871779 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55868804 55870154 55868804 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55868610 55868713 55868610 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55867776 55867973 55867776 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 CDS 55866570 55866875 55866570 ID=Msa0171230-mRNA-1:cds;Parent=Msa0171230-mRNA-1
chr1_4 three_prime_UTR 55866124 55866569 55866124 ID=Msa0171230-mRNA-1:three_prime_utr;Parent=Msa0171230-mRNA-1
Gene Sequence

>Msa0171230

ATGACAGATGACTCTGAGATAAGAGAAACCGGGTTTGATGAGGGAAGTTGGGCTTGGCCCAAATCAGGTTTGATTAAGGGGAGGGGAAGACGAATCAGGACATTATTGCTTATTGCCCTTTGCATGAGGTCATTGATGGGGACCGAGCTTATGAGGATATGTGTTAAAGAAGATGATGATTTTCCGTCAGTTCCACCGGGTTTTGAGTCATATACATCTTTCGCACTGAAGAGGGTAGAAGAGAATGAGAAAAACAATGATAAAAATCCGACGAGTTCCTCGACGACGACAAGTGCATCTGAATCACAGTCAACTCAGGTTGGAAATGGTGTCCAATTGAGTGATAGTGCAAAGGTTTCTAGATCCCTTCGACGAAGAAGATGGATTAACCATGGAAAGTGCGATAGCGGTTCAGAGGAAGACGCTGATTGTGAGCGGCATGATCAAAATTTCTCCTCGAGACCTTGTCTTCCTAAAGGAGTCCTCAGAGGATGTCCAGATTGCCGTAATTGCCAAAAGGTCATTGCTAGATGGCGACCAGAAGATGCTCGTAGACCACAAATTGAGAATGCTCCTGTTTTCTACCCCACTGAAGAGGAATTTCAAGATACTTTGAAATATATATCGAAGATTCGCTCCAGAGCTGAACCATATGGAATCTGCCGTATTGTTCCCCCACGTTCATGGAAACCCCCTTGTCCTCTCAAGGAAAAAAGTATATGGGAGGGTTCTAAATTCGCTACTCGTGTTCAGAGGATTGACAAACTTCAGAATCGTAACTCAGGGACAAAGAAGTCAAGGATTCAAAATAATATGAAAAGGAAAAGGAGAAGATGCACAAGAATGGGAGTGGATAATGGCACTGGAACAGAACCTAATGCAGGATTTTGTGAAGTTGAAACATTTGGGTTTGAACCTGGCCCAGAATTTACCTTGGAAACATTTAAGAGATATGCAGACGAGTTTAAGGCCGAATACTTCAAAAATGATAATTTATCTCATCCAAGTGCTAATACAGCAATTTTAAATGGTACCTTAGAGCCTTCTGTGGAGAACATTGAGGGTGAATACTGGCGGATGGTTGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACTGGGAGTTTTGGGAGTGGTTTTCCTAGCAAGTCTAGTCAAGTTTCTGTTTCATACGAGCAGTACATAAAATCTGGGTGGAATTTAAATAACTTTGCAAGGTTACCAGGATCTCTGCTCTCTTATGAAACCAGTGATATATCTGGTGTTGTAGTGCCATGGTTGTATATAGGAATGTGCTTTTCCTCATTTTGTTGGCATGTGGAAGATCACCATTTATATTCATTGAATTATATGCATCTGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGCAAAAGATGCATGCAAATTGGAAGAGGCCATGAGAAAGCAGTTACCTGAACTTTTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACACAGCTTTCTCCTTCTATTCTTAAGTCCAAAGGTGTGCCAGTTTATAGGTGTGTCCAAAACCCTGGGGACTTTATTCTAACATTTCCTCGAGCCTACCACTCTGGGTTCAATTGTGGCTTCAACTGTGCTGAGGCTGTTAATGTAGCTCCCGTTGACTGGCTTCCACATGGACATATTGCTATAGAGCTGTACCGGGAGCAGGGGCGTAAGACTTCTGTATCTCATGATAAGCTATTGCTTGGGGCTGCTAGGGAAGCAGTACGAGCCCAGTGGGAGATTACTTTGCTGAAGAAAAACACTTCGGATAATCTAAAATGGAAAGATGTTTGTGGAAAAGACGGTCTTTTGGCAAAAGCATTCAAGGCACGTGTTGAGATGGAGCGGGTAAGAAGGGAATTTCTCTGCAGTTCTTCAAAGGCATTAAAAATGGAGAGTAGTTTTGATGCTACCAGTGAAAGGGAATGCAGCATCTGCTTCTTTGATTTACACCTATCTGCTGCTGCCTGTCACTGTTTCACAGATAGATATGCTTGCTTGGATCATGCTAAGCAATTGTGTTCATGCTCTTGGAGCTCCAAATTTTTCCTCTTTCGTTATGATATTAGCGAACTAAATATTCTTGTTGAGGCATTGGAAGGAAAATTAAGTGCAGTTTATAGATGGGCAAAATTAGACCTTGGGCTGGCCCTAACTTCTTATATCTCAGTAGATAAAAAAACAGTATGTCGGGAATTGAAATTGCATTCATCCGACTCGTCTCATTCTTCCAGGAGCAATGTGAATAATGAGGCGGCTTTGACAGATGTTCCAATAGTGGATCAAGCAAATTCTGCAAATAGCAAGGATCAGAGCTATCTTAAACAGAAGAATAGCTCCATACCTACGTGTGAGATGGCTAATCGTAAGATCTTTGCTATTAAAGGAGAGTCTATCATTTGTAGATCAAAGCCGAGTGTCCCTGTTTGTGAATTCAATCAAGAGGATTCCTCATATGCTTTATCACCGCCGCTAGCTCAACACGGAGATGAGAAAAGTACACATTCAAGACCTAAAGATATCATACTTCTTAGCGACGACGAAGATGATGAAATGAAGATGTCAGATTCAAATAGAAGGAAGGTGGTTCCTCATATGCTTGCTGGTTCTAGAAATAAAGCAAGCCTGTGTAGTGATATAGAAGATAAAAGCTTGACCATCCCTGTGACAGATGCTTCTGTGACGGGTGAGAAGGATGCTATTGCGGTGCTTCGTGAAGATTCAGGCTCAAATTCAACTCAGCTTTTACAAGTAAAACAAGAATGTCACGAGCAGAGAAGACCAATTATACCTTCTACCCCAGTAGATCTTTCTTTTCATATAGGTCTTACTGGTGCAGAATCAGCGAGGAACATTCCAGCTTCTACAAGAGCGGATGCCAGCGGTCATAGTTTAAAAAGTTTGGAGGTTTGTCCTTCAAACCCCCAACCTTCCAGCACTATTAAGGCTAAGAACGAGGATAATCATGAGAGGTTTGATGGATGTTCCACTTCTAATGTAGCAGACAATGCAAGAGCTGTTAACGGAAACATCTCTTGTGGTCCAAACAATTCCCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTTTGGAATTTGGAGTTGTGCTTTCTGGAAAGTCATGGTGCAGCATTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGTGTTCGATACATAAATATCTTAGATCCATGCAGTACATGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTCGCCTCTATTTATGGTTTCCTTGGAAAATAATCCAAGGGAGGTTTTCATTCATATGTCAGCAACAAAATGCTGGGATATGGTAAGAGAGAGAGTGAATCTAGAGATAGCAAAACAGTTTAAGCTGGGAAGAAAAGGCCTTCCTCCTTTACATCCTGCTGGCAGCCTTGATGGCATCGAAATGTTTGGATTTTCTTCACCAGAAATAGTGAAGGCTATTGAGGCACTAGATCGTAGTCGAGTTTGTCATGAATACTGGGACTTCCGTCGGCCTCAAGGGCAGCTTTCACAAGCTGGCCAGACCAGTGTAAATGGTGGAGGTGGAAGTGATCAAGGGGTTCCCATGAATCAGCACACACCCACCGGAGCTGTTGCAGTACTGAAGAGCCTATTTAAAAAAGCGAATCCGGAAGAATTGAACTCATTGTACAACATTCTTACTGACAATAAGCCAGCGGCTGAACAGATCCCAATTGCAAAAATTCTCTATGAAGAAATTCACAAAACCCAACCACCCTAG
Protein sequence

>Msa0171230

MTDDSEIRETGFDEGSWAWPKSGLIKGRGRRIRTLLLIALCMRSLMGTELMRICVKEDDDFPSVPPGFESYTSFALKRVEENEKNNDKNPTSSSTTTSASESQSTQVGNGVQLSDSAKVSRSLRRRRWINHGKCDSGSEEDADCERHDQNFSSRPCLPKGVLRGCPDCRNCQKVIARWRPEDARRPQIENAPVFYPTEEEFQDTLKYISKIRSRAEPYGICRIVPPRSWKPPCPLKEKSIWEGSKFATRVQRIDKLQNRNSGTKKSRIQNNMKRKRRRCTRMGVDNGTGTEPNAGFCEVETFGFEPGPEFTLETFKRYADEFKAEYFKNDNLSHPSANTAILNGTLEPSVENIEGEYWRMVESPTEEIEVLYGADLETGSFGSGFPSKSSQVSVSYEQYIKSGWNLNNFARLPGSLLSYETSDISGVVVPWLYIGMCFSSFCWHVEDHHLYSLNYMHLGAPKMWYGVPAKDACKLEEAMRKQLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYRCVQNPGDFILTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGHIAIELYREQGRKTSVSHDKLLLGAAREAVRAQWEITLLKKNTSDNLKWKDVCGKDGLLAKAFKARVEMERVRREFLCSSSKALKMESSFDATSERECSICFFDLHLSAAACHCFTDRYACLDHAKQLCSCSWSSKFFLFRYDISELNILVEALEGKLSAVYRWAKLDLGLALTSYISVDKKTVCRELKLHSSDSSHSSRSNVNNEAALTDVPIVDQANSANSKDQSYLKQKNSSIPTCEMANRKIFAIKGESIICRSKPSVPVCEFNQEDSSYALSPPLAQHGDEKSTHSRPKDIILLSDDEDDEMKMSDSNRRKVVPHMLAGSRNKASLCSDIEDKSLTIPVTDASVTGEKDAIAVLREDSGSNSTQLLQVKQECHEQRRPIIPSTPVDLSFHIGLTGAESARNIPASTRADASGHSLKSLEVCPSNPQPSSTIKAKNEDNHERFDGCSTSNVADNARAVNGNISCGPNNSRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSIQAIFPKGFRSRVRYINILDPCSTCYYISEILDAGRGSPLFMVSLENNPREVFIHMSATKCWDMVRERVNLEIAKQFKLGRKGLPPLHPAGSLDGIEMFGFSSPEIVKAIEALDRSRVCHEYWDFRRPQGQLSQAGQTSVNGGGGSDQGVPMNQHTPTGAVAVLKSLFKKANPEELNSLYNILTDNKPAAEQIPIAKILYEEIHKTQPP*