AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0127470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127470 MtrunA17_Chr1g0191741 87.943 423 17 1 305 693 1 423 0.0 755
Msa0127470 MtrunA17_Chr1g0191731 95.736 258 10 1 1 257 1 258 0.0 522
Msa0127470 MtrunA17_Chr8g0393041 45.455 396 181 2 332 693 64 458 1.64e-108 341
Msa0127470 MtrunA17_Chr4g0050371 44.313 422 195 3 310 693 48 467 7.87e-106 334
Msa0127470 MtrunA17_Chr2g0279961 25.672 409 248 13 324 687 189 586 1.71e-21 99.4
Msa0127470 MtrunA17_Chr8g0384851 42.754 138 78 1 331 468 203 339 9.97e-18 87.4
Msa0127470 MtrunA17_Chr8g0385461 30.612 147 95 3 330 475 225 365 4.02e-15 79.0
Msa0127470 MtrunA17_Chr3g0130801 37.681 138 84 1 331 468 267 402 5.60e-15 78.6
Msa0127470 MtrunA17_Chr3g0097801 46.903 113 59 1 367 479 141 252 2.06e-14 76.6
Msa0127470 MtrunA17_Chr8g0377651 39.474 114 63 2 367 475 140 252 3.41e-13 72.8
Msa0127470 MtrunA17_Chr8g0377641 38.596 114 64 2 367 475 137 249 7.22e-13 71.6
Msa0127470 MtrunA17_Chr8g0377681 39.474 114 63 3 367 475 137 249 1.19e-12 70.9
Msa0127470 MtrunA17_Chr8g0377701 40.000 105 57 3 376 475 150 253 2.82e-12 69.7
Msa0127470 MtrunA17_Chr8g0377691 40.952 105 56 3 376 475 149 252 8.18e-12 68.2
Msa0127470 MtrunA17_Chr4g0037521 30.814 172 105 4 331 493 97 263 3.43e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127470 AT1G08980.1 60.333 421 129 4 305 687 1 421 2.02e-168 489
Msa0127470 AT5G09420.1 42.731 454 217 5 278 692 17 466 9.74e-109 342
Msa0127470 AT3G17970.2 44.697 396 180 3 334 693 61 453 1.03e-104 330
Msa0127470 AT3G17970.1 44.697 396 180 3 334 693 61 453 4.56e-104 330
Msa0127470 AT3G05250.1 53.968 252 104 4 15 257 22 270 1.92e-87 276
Msa0127470 AT3G05250.3 50.249 201 90 3 66 257 2 201 2.12e-59 199
Msa0127470 AT3G05250.2 50.249 201 90 3 66 257 2 201 2.12e-59 199
Msa0127470 AT5G64440.1 35.849 159 88 3 331 479 197 351 2.11e-19 93.2
Msa0127470 AT5G07360.1 32.484 157 92 4 330 478 267 417 1.99e-15 80.5
Msa0127470 AT5G07360.3 32.484 157 92 4 330 478 267 417 1.99e-15 80.5
Msa0127470 AT3G25660.1 39.610 154 82 3 330 479 107 253 2.45e-14 76.6
Msa0127470 AT5G07360.2 31.210 157 87 5 330 478 267 410 9.38e-12 68.9

Find 182 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCAATTGTTGGAGTTTC+TGG -0.035785 1_3:-56821051 Msa0127470:CDS
ATGTGAAAATTTCAGGATTT+TGG 0.174447 1_3:-56821168 Msa0127470:intron
ATCATCTTCCTTCTGTTAAA+AGG 0.175024 1_3:-56827073 None:intergenic
TCTCTCATCCTTCTATAATT+TGG 0.189742 1_3:+56820594 None:intergenic
GATGCTCTTACTTCTCTTCT+TGG 0.224914 1_3:-56821656 Msa0127470:CDS
ATATCTGTCATTCTATAATA+AGG 0.252585 1_3:-56821688 Msa0127470:CDS
AATCATCTTGTCAGCTTTGC+TGG 0.254185 1_3:+56820807 None:intergenic
AAACTTACAATGATTGATTA+AGG 0.260467 1_3:+56824245 None:intergenic
TTCTACTGCTCCAACAGTTT+TGG 0.268666 1_3:-56823828 Msa0127470:CDS
ATTCAACTATTTCTTGCTTC+AGG 0.278541 1_3:-56825141 Msa0127470:CDS
GTGACTGTGCCACTGACTTT+TGG 0.278621 1_3:-56824350 Msa0127470:CDS
AAATGCAATTGAAGCAAAAT+TGG 0.282588 1_3:+56826836 None:intergenic
ATGCTCTTACTTCTCTTCTT+GGG 0.283942 1_3:-56821655 Msa0127470:CDS
ATGAAGGGTCCAAGGCAAAT+TGG 0.286497 1_3:+56826889 None:intergenic
GAATTCATCTGCACCATTCT+TGG 0.287853 1_3:+56820878 None:intergenic
TCATGGATGAAATGGCTTAC+AGG 0.289533 1_3:-56823766 Msa0127470:intron
GATGAGTTTGTTTGTAGTTT+AGG 0.294097 1_3:+56821111 None:intergenic
GCCAATCAAAATTTGATGTT+TGG 0.299933 1_3:-56824323 Msa0127470:CDS
TCTTCTGCACAAGGATTTCT+AGG 0.310065 1_3:+56823179 None:intergenic
CAGAAGAAGGTGGAGGAGTA+TGG 0.321798 1_3:+56826779 None:intergenic
TATTCAATGTATCACAATAT+TGG 0.322770 1_3:-56826256 Msa0127470:CDS
GCGGTTTATATTCAACGATT+AGG 0.330129 1_3:-56825096 Msa0127470:CDS
CTTTGCAGCATAAACCGATT+AGG 0.343533 1_3:-56826973 Msa0127470:five_prime_UTR
TGAAGTTTCTCAAAATGAAT+TGG 0.351292 1_3:-56825049 Msa0127470:CDS
ATGGAAACAGCCTCAGAATA+TGG 0.351788 1_3:-56824150 Msa0127470:CDS
AATGCAGTCAAACCTGATTT+AGG 0.352459 1_3:-56821767 Msa0127470:CDS
CATTGGAACAACTCCTGATT+TGG 0.352802 1_3:+56822866 None:intergenic
ATCATTGTGCACCATATCTT+TGG 0.356487 1_3:-56825405 Msa0127470:CDS
GATTAAGGAGCTTCTCTTCT+CGG 0.357039 1_3:+56824260 None:intergenic
CTACTGCAGATGGTGTATTA+AGG 0.359791 1_3:-56822075 Msa0127470:intron
AAAGGGTATGTAGCTGGATT+CGG 0.360080 1_3:-56823887 Msa0127470:CDS
ATACCAATCTTCAAGATGAT+TGG 0.360771 1_3:-56826575 Msa0127470:intron
CTCATGATCCCCACAGTTCC+AGG 0.370995 1_3:-56821141 Msa0127470:CDS
GAAATTCCCGGACCTAAATC+AGG 0.371160 1_3:+56821755 None:intergenic
ATACATGAAGGCCAAAGTTC+CGG 0.379495 1_3:-56822035 Msa0127470:CDS
CTTTCTCCTCTAATCCTAAT+CGG 0.381538 1_3:+56826959 None:intergenic
TACATGAAGGCCAAAGTTCC+GGG 0.381544 1_3:-56822034 Msa0127470:CDS
GAGAGAGAGTAAAATATGAT+TGG 0.386926 1_3:-56820571 Msa0127470:three_prime_UTR
TTTAGCCTTCTGTCAATTGT+TGG 0.387937 1_3:-56821060 Msa0127470:CDS
TGAAGGGTCCAAGGCAAATT+GGG 0.389515 1_3:+56826890 None:intergenic
GCAAATGGAATCATGCGAAT+TGG 0.390646 1_3:+56826912 None:intergenic
TCCATTTGCCCAATTTGCCT+TGG 0.397118 1_3:-56826898 Msa0127470:CDS
CATGTTTGAAGCCAGTTGTT+TGG 0.403516 1_3:+56826212 None:intergenic
ATGCTTCAAACCCGGAACTT+TGG 0.405620 1_3:+56822024 None:intergenic
CTCTGCTCTGGCAGTATAAA+CGG 0.415014 1_3:-56823224 Msa0127470:intron
TAAGAAGTCACAAAATTGAT+TGG 0.415192 1_3:+56820641 None:intergenic
CATAAACCGATTAGGATTAG+AGG 0.415618 1_3:-56826965 Msa0127470:five_prime_UTR
CAAATGGAATCATGCGAATT+GGG 0.418412 1_3:+56826913 None:intergenic
AGTGAATTCAGAGGAAGATC+AGG 0.421144 1_3:+56824084 None:intergenic
AAGGGTATGTAGCTGGATTC+GGG 0.422066 1_3:-56823886 Msa0127470:CDS
CTGGATTCGGGAATCCTGAT+TGG 0.427101 1_3:-56823874 Msa0127470:CDS
TGGAGGAGTATGGTGGCGTT+TGG 0.427207 1_3:+56826789 None:intergenic
TTGCATAGCCAAATTATAGA+AGG 0.428413 1_3:-56820602 Msa0127470:three_prime_UTR
AACGGAGAAAATATACACTA+TGG 0.428548 1_3:-56823206 Msa0127470:CDS
TTGGTGTGGTCAAAACATTA+TGG 0.428857 1_3:-56825386 Msa0127470:CDS
CTCAGAATATGGAGCATTCA+TGG 0.429020 1_3:-56824139 Msa0127470:CDS
TGATGAGTCCTTGCCCAATC+AGG 0.432179 1_3:+56823860 None:intergenic
CGATTAGGATGGAGCTCACC+CGG 0.432663 1_3:-56825081 Msa0127470:CDS
TCCAAGGCAAATTGGGCAAA+TGG 0.433126 1_3:+56826897 None:intergenic
TCTCCCTGCATCAGTTTCTC+TGG 0.435603 1_3:-56820904 Msa0127470:CDS
AAGCTTGTGGATTTCTCTCT+AGG 0.437688 1_3:-56823107 Msa0127470:intron
AAAAGAACCTGAAAAGAAAC+AGG 0.438715 1_3:-56825238 Msa0127470:CDS
TCGGTTCTTGCTCCCAGAAA+AGG 0.439473 1_3:+56825180 None:intergenic
CATGGCAGAATCTCCAAATC+AGG 0.442265 1_3:-56822879 Msa0127470:CDS
ACACAGCAGGACAAAACAAT+TGG 0.444513 1_3:-56824376 Msa0127470:intron
AAACCAATCATCTTGAAGAT+TGG 0.452758 1_3:+56826572 None:intergenic
AGATCAGGGGAAGAAGAAGT+TGG 0.455048 1_3:+56824099 None:intergenic
TGTGCAGAAGACCGAGTACC+TGG 0.460107 1_3:-56823167 Msa0127470:CDS
GTATCAAAACTCTGTGCCAT+TGG 0.464094 1_3:+56822849 None:intergenic
AGTATAATCAGCCAAACAAC+TGG 0.467015 1_3:-56826223 Msa0127470:CDS
TCAAACAGATTTGATGTGAA+AGG 0.469333 1_3:-56823905 Msa0127470:intron
TTTGTTTGTAGTTTAGGTGG+AGG 0.469512 1_3:+56821117 None:intergenic
TGCTCTTACTTCTCTTCTTG+GGG 0.470760 1_3:-56821654 Msa0127470:intron
AAAGCAATACAGAAGTTGTA+TGG 0.471747 1_3:-56822254 Msa0127470:CDS
TATCTGTCATTCTATAATAA+GGG 0.472049 1_3:-56821687 Msa0127470:CDS
TAAAACTGTCATGGATGAAA+TGG 0.474000 1_3:-56823774 Msa0127470:CDS
GTCAAACCTGATTTAGGTCC+GGG 0.474511 1_3:-56821761 Msa0127470:CDS
AGTGGCTCTGCTGTTGCAGT+TGG 0.475708 1_3:-56823134 Msa0127470:CDS
AAAATCATAGGGACTGATAC+AGG 0.476501 1_3:-56822957 Msa0127470:intron
TTCGGATTTCGTCCTTCTCA+TGG 0.478963 1_3:-56822897 Msa0127470:CDS
CAAACAGATTTGATGTGAAA+GGG 0.481734 1_3:-56823904 Msa0127470:intron
TTAAGAATAACCATGGTGAA+TGG 0.483366 1_3:-56821793 Msa0127470:CDS
ATTCTCCTCTGTTGTGCGTA+GGG 0.484217 1_3:+56821715 None:intergenic
ATTTGTGAAACTACATTGAA+AGG 0.487229 1_3:+56822284 None:intergenic
TGAATTCTTGCTTCACCTTG+TGG 0.490557 1_3:-56820862 Msa0127470:CDS
GATACGCGTTCTGAAATTCC+CGG 0.490711 1_3:+56821743 None:intergenic
GTTTCTCTGGTGGCCAAGAA+TGG 0.492568 1_3:-56820891 Msa0127470:CDS
GAGTTTGTTTGTAGTTTAGG+TGG 0.495250 1_3:+56821114 None:intergenic
TCATCAAATATGTACAGGTA+TGG 0.500375 1_3:+56825006 None:intergenic
GAGTTCCTGCATCATATTGT+GGG 0.502454 1_3:-56822923 Msa0127470:CDS
AAATAAGCAAACCTTACAAA+GGG 0.505617 1_3:+56826747 None:intergenic
TGCAGTTGGTGCAAAGCTTG+TGG 0.505836 1_3:-56823120 Msa0127470:CDS
TGATTGGGCAAGGACTCATC+AGG 0.506790 1_3:-56823858 Msa0127470:CDS
TCTATCATACATGGAGTTGA+CGG 0.507468 1_3:-56826624 Msa0127470:CDS
TTTATATTCAACGATTAGGA+TGG 0.507524 1_3:-56825092 Msa0127470:CDS
AGTCAAACCTGATTTAGGTC+CGG 0.508658 1_3:-56821762 Msa0127470:CDS
AGGTGGAGGACCTGGAACTG+TGG 0.511646 1_3:+56821131 None:intergenic
CTTGAAAGTGCAGCCAGTGA+TGG 0.511834 1_3:+56821962 None:intergenic
TGTAGTTTAGGTGGAGGACC+TGG 0.515140 1_3:+56821123 None:intergenic
TGGATTCGGGAATCCTGATT+GGG 0.516288 1_3:-56823873 Msa0127470:CDS
GGTGGAGGACCTGGAACTGT+GGG 0.520381 1_3:+56821132 None:intergenic
GCCACCAGAGAAACTGATGC+AGG 0.523962 1_3:+56820900 None:intergenic
GGCTTCAAACATGGTTGAGA+CGG 0.524284 1_3:-56826202 Msa0127470:CDS
TCTTGCTCCCAGAAAAGGCC+TGG 0.525582 1_3:+56825185 None:intergenic
CAATGCTATTATACTCAACA+AGG 0.528031 1_3:-56826421 Msa0127470:intron
CTCAGGACAGCCAAAACTGT+TGG 0.528096 1_3:+56823818 None:intergenic
TTATCTTGCTCTGTGTCAGT+GGG 0.528642 1_3:+56827002 None:intergenic
ATTTATATAATGACGTTGAA+AGG 0.530393 1_3:+56826596 None:intergenic
TATTCTCCTCTGTTGTGCGT+AGG 0.530597 1_3:+56821714 None:intergenic
CAAACAACTGGCTTCAAACA+TGG 0.534179 1_3:-56826211 Msa0127470:CDS
GATGTGAAAGGGTATGTAGC+TGG 0.535739 1_3:-56823893 Msa0127470:CDS
GTGCCATGCGATTGCTTCAG+AGG 0.540124 1_3:-56821940 Msa0127470:intron
TTACATGTCTTTGACTGCAA+AGG 0.544281 1_3:+56824059 None:intergenic
TGTCAGTCTCTGAAGCAGCC+AGG 0.547615 1_3:-56825203 Msa0127470:CDS
TTGGAGATTCTGCCATGAGA+AGG 0.548028 1_3:+56822885 None:intergenic
ACAAACAAACTCATCAGACT+TGG 0.548935 1_3:-56821103 Msa0127470:CDS
GCTTCAAACATGGTTGAGAC+GGG 0.549730 1_3:-56826201 Msa0127470:CDS
CCCTGCATCAGTTTCTCTGG+TGG 0.555780 1_3:-56820901 Msa0127470:CDS
ATTATCTTGCTCTGTGTCAG+TGG 0.557147 1_3:+56827001 None:intergenic
AGGATTAGAGGAGAAAGCGA+TGG 0.557455 1_3:-56826953 Msa0127470:exon
AAAATCCCACAATATGATGC+AGG 0.558950 1_3:+56822918 None:intergenic
GAGGTAGGAAGGTTGAATGA+AGG 0.559769 1_3:+56826873 None:intergenic
GAGCCACTAGAAGATCCTCC+AGG 0.564074 1_3:+56823149 None:intergenic
TAGAAGATCCTCCAGGTACT+CGG 0.570948 1_3:+56823156 None:intergenic
AGAGTTCCTGCATCATATTG+TGG 0.574916 1_3:-56822924 Msa0127470:CDS
AGTATACAACATTCCATCAC+TGG 0.575077 1_3:-56821975 Msa0127470:CDS
CTCATGAAATGCTTCAAACC+CGG 0.575467 1_3:+56822016 None:intergenic
TCAGGGGAAGAAGAAGTTGG+TGG 0.576808 1_3:+56824102 None:intergenic
GAAATAAGCAAACCTTACAA+AGG 0.577442 1_3:+56826746 None:intergenic
GATTAGGATGGAGCTCACCC+GGG 0.584372 1_3:-56825080 Msa0127470:CDS
AGTGCAGGTGCCACTTGTGT+TGG 0.587175 1_3:-56823797 Msa0127470:CDS
AGGTAGGAAGGTTGAATGAA+GGG 0.590579 1_3:+56826874 None:intergenic
CAAATCAGGAGTTGTTCCAA+TGG 0.592624 1_3:-56822865 Msa0127470:CDS
CATGAATGCTCCATATTCTG+AGG 0.594444 1_3:+56824140 None:intergenic
TCGGGAATCCTGATTGGGCA+AGG 0.594720 1_3:-56823868 Msa0127470:CDS
GTATTAAGGCATGAAATCCT+TGG 0.599364 1_3:-56822061 Msa0127470:CDS
CACAAGTGGCACCTGCACTC+AGG 0.599971 1_3:+56823801 None:intergenic
TTGCAGGTAAGCATACCACT+AGG 0.600924 1_3:-56820939 Msa0127470:intron
GTGTAAACAGTGATCGAGGT+AGG 0.602534 1_3:+56826858 None:intergenic
GAATATTGAAGCTTATGATG+CGG 0.603295 1_3:-56825115 Msa0127470:CDS
GTGAATTCAGAGGAAGATCA+GGG 0.603806 1_3:+56824085 None:intergenic
AAACAGTGATCGAGGTAGGA+AGG 0.604655 1_3:+56826862 None:intergenic
AAGGTTGAATGAAGGGTCCA+AGG 0.608490 1_3:+56826881 None:intergenic
ATCCTCAAAACTCAATCACA+CGG 0.608657 1_3:-56824298 Msa0127470:CDS
GGAAATTCAAGCTCTTACCC+AGG 0.610935 1_3:-56826180 Msa0127470:intron
TTGTGTTGGTAAAACTGTCA+TGG 0.611411 1_3:-56823783 Msa0127470:CDS
AATAAGCAAACCTTACAAAG+GGG 0.618535 1_3:+56826748 None:intergenic
GGTACTCGGTCTTCTGCACA+AGG 0.622489 1_3:+56823170 None:intergenic
GTACCTGGAGGATCTTCTAG+TGG 0.622763 1_3:-56823152 Msa0127470:CDS
CATTTAACAGAAGAAGGTGG+AGG 0.624245 1_3:+56826772 None:intergenic
CTGCATTGATCCATTCACCA+TGG 0.629877 1_3:+56821783 None:intergenic
AGCAGGACAAAACAATTGGA+AGG 0.629905 1_3:-56824372 Msa0127470:intron
TGGTCAAAACATTATGGACA+AGG 0.631128 1_3:-56825380 Msa0127470:intron
TGTGCACCATATCTTTGGTG+TGG 0.633296 1_3:-56825400 Msa0127470:CDS
AATCCTTGGTGAATACATGA+AGG 0.634346 1_3:-56822047 Msa0127470:CDS
TATGAATTTAAGAATAACCA+TGG 0.640782 1_3:-56821800 Msa0127470:CDS
AAAACGTAATACAGTAGACA+TGG 0.641014 1_3:-56824169 Msa0127470:intron
AAACTCCAACAATTGACAGA+AGG 0.641345 1_3:+56821055 None:intergenic
CCACCAGAGAAACTGATGCA+GGG 0.643035 1_3:+56820901 None:intergenic
ATTGGTGTAAACAGTGATCG+AGG 0.649781 1_3:+56826854 None:intergenic
TGAATTCAGAGGAAGATCAG+GGG 0.649996 1_3:+56824086 None:intergenic
ATACCTCTGAAGCAATCGCA+TGG 0.654077 1_3:+56821937 None:intergenic
TGCAGGTAAGCATACCACTA+GGG 0.654224 1_3:-56820938 Msa0127470:intron
CTTTGTCTGAGTAGGTTGCG+TGG 0.654688 1_3:-56826285 Msa0127470:intron
AATCTCATACACAAATCTGT+CGG 0.662448 1_3:+56825161 None:intergenic
AAGAAGGTGGAGGAGTATGG+TGG 0.662680 1_3:+56826782 None:intergenic
TGGCCTTCATGTATTCACCA+AGG 0.668980 1_3:+56822044 None:intergenic
GCAATACAGAAGTTGTATGG+AGG 0.669443 1_3:-56822251 Msa0127470:intron
TCCTCAAAACTCAATCACAC+GGG 0.670896 1_3:-56824297 Msa0127470:CDS
AGATGCCCTACGCACAACAG+AGG 0.683377 1_3:-56821720 Msa0127470:CDS
ATAAGCAAACCTTACAAAGG+GGG 0.683848 1_3:+56826749 None:intergenic
TTGGCCAATCCAAAAGTCAG+TGG 0.685056 1_3:+56824341 None:intergenic
AGAACCTGAAAAGAAACAGG+AGG 0.686534 1_3:-56825235 Msa0127470:CDS
GTGGAGGACCTGGAACTGTG+GGG 0.688610 1_3:+56821133 None:intergenic
ATCATAGGGACTGATACAGG+AGG 0.690646 1_3:-56822954 Msa0127470:intron
ATTAGGATGGAGCTCACCCG+GGG 0.691130 1_3:-56825079 Msa0127470:CDS
GCAAAGGTGAGTGAATTCAG+AGG 0.693265 1_3:+56824075 None:intergenic
TATCTTGCTCTGTGTCAGTG+GGG 0.693945 1_3:+56827003 None:intergenic
GGGCATTTAACAGAAGAAGG+TGG 0.695817 1_3:+56826769 None:intergenic
AGATCATTATACATCCCTAG+TGG 0.705039 1_3:+56820924 None:intergenic
TATCATAAATACTCTCCACA+AGG 0.718171 1_3:+56820847 None:intergenic
GCAGAAGACCGAGTACCTGG+AGG 0.734688 1_3:-56823164 Msa0127470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAAATATCATATTTTTAT+TGG - chr1_3:56822082-56822101 Msa0127470:intron 10.0%
!! TAAGAAATTAGTTAAATGAA+AGG + chr1_3:56821255-56821274 None:intergenic 15.0%
!! ATATAATAGTATACAATTGT+TGG - chr1_3:56822304-56822323 Msa0127470:CDS 15.0%
!!! TTGTTTACATATACTTTTAA+TGG - chr1_3:56822816-56822835 Msa0127470:intron 15.0%
!!! TGTTTACATATACTTTTAAT+GGG - chr1_3:56822817-56822836 Msa0127470:intron 15.0%
!!! CATTATTTTTCATTTTCTAA+GGG - chr1_3:56823978-56823997 Msa0127470:intron 15.0%
!!! TTAGTTTTTGTTAAAATCAT+AGG - chr1_3:56824666-56824685 Msa0127470:intron 15.0%
!!! TAGTTTTTGTTAAAATCATA+GGG - chr1_3:56824667-56824686 Msa0127470:intron 15.0%
!!! TCTATTAAATCTCTTTTTTT+GGG - chr1_3:56824838-56824857 Msa0127470:intron 15.0%
!!! TATAATTTTTATCGTGAAAA+TGG + chr1_3:56826334-56826353 None:intergenic 15.0%
!! TACTTAAATAATGAAGAAAT+AGG + chr1_3:56826655-56826674 None:intergenic 15.0%
!! TTATGATAACATTGAAAAAT+AGG - chr1_3:56826803-56826822 Msa0127470:CDS 15.0%
!!! GATAATTTTTCTATCATACA+TGG - chr1_3:56821002-56821021 Msa0127470:intron 20.0%
!! ATTTATATAATGACGTTGAA+AGG + chr1_3:56821042-56821061 None:intergenic 20.0%
!! TATTCAATGTATCACAATAT+TGG - chr1_3:56821379-56821398 Msa0127470:intron 20.0%
!! ATAAGATTTGATTCACAATA+TGG - chr1_3:56822126-56822145 Msa0127470:intron 20.0%
!! ATGAGAAAAATAAAACAAAC+AGG + chr1_3:56822680-56822699 None:intergenic 20.0%
!! TTATTTCAACTTCACAAAAT+TGG - chr1_3:56823011-56823030 Msa0127470:intron 20.0%
!! GAATGCAATAAAGAATAATA+TGG - chr1_3:56823206-56823225 Msa0127470:CDS 20.0%
!! AAACTTACAATGATTGATTA+AGG + chr1_3:56823393-56823412 None:intergenic 20.0%
!!! TTCTTTTTTTCTTTTTCTGT+TGG - chr1_3:56823905-56823924 Msa0127470:intron 20.0%
!!! GCATTATTTTTCATTTTCTA+AGG - chr1_3:56823977-56823996 Msa0127470:intron 20.0%
!!! ATCTGTAGGTATTTTTTATT+AGG - chr1_3:56824297-56824316 Msa0127470:CDS 20.0%
!!! TATGTTTTTCCTTTAAATGT+AGG - chr1_3:56824612-56824631 Msa0127470:intron 20.0%
!!! CTCTATTAAATCTCTTTTTT+TGG - chr1_3:56824837-56824856 Msa0127470:intron 20.0%
!! ATATCTAAATTGATGTCATT+AGG + chr1_3:56824972-56824991 None:intergenic 20.0%
!! TCACAAATAGTAAAAAATCA+AGG + chr1_3:56825809-56825828 None:intergenic 20.0%
!!! TTTTTTACTATTTGTGACAT+AGG - chr1_3:56825812-56825831 Msa0127470:intron 20.0%
!! TATGAATTTAAGAATAACCA+TGG - chr1_3:56825835-56825854 Msa0127470:intron 20.0%
!! ATATCTGTCATTCTATAATA+AGG - chr1_3:56825947-56825966 Msa0127470:intron 20.0%
!! TATCTGTCATTCTATAATAA+GGG - chr1_3:56825948-56825967 Msa0127470:intron 20.0%
!! TTCACGATAAAAATTATAGT+AGG - chr1_3:56826336-56826355 Msa0127470:intron 20.0%
!!! TTACTTTTTTTATTACTGCA+AGG - chr1_3:56826854-56826873 Msa0127470:CDS 20.0%
!!! TACTTTTTTTATTACTGCAA+GGG - chr1_3:56826855-56826874 Msa0127470:CDS 20.0%
!! TTTCTTTTCCTTTTAACAGA+AGG + chr1_3:56820573-56820592 None:intergenic 25.0%
! AAATGCAATTGAAGCAAAAT+TGG + chr1_3:56820802-56820821 None:intergenic 25.0%
! AAATAAGCAAACCTTACAAA+GGG + chr1_3:56820891-56820910 None:intergenic 25.0%
! GAAATTAGTTAAATGAAAGG+TGG + chr1_3:56821252-56821271 None:intergenic 25.0%
!!! TAGTTAATTTGTCAGATTAG+TGG - chr1_3:56821479-56821498 Msa0127470:intron 25.0%
!!! TCAAACACAAGATTTTAAGT+AGG - chr1_3:56821658-56821677 Msa0127470:CDS 25.0%
!!! AGATTACACTAAACTAGTTT+TGG + chr1_3:56821922-56821941 None:intergenic 25.0%
! TTTATATTCAACGATTAGGA+TGG - chr1_3:56822543-56822562 Msa0127470:intron 25.0%
! TGAAGTTTCTCAAAATGAAT+TGG - chr1_3:56822586-56822605 Msa0127470:intron 25.0%
! AAGTATATGTAAACAACTTC+TGG + chr1_3:56822812-56822831 None:intergenic 25.0%
!!! TACATATACTTTTAATGGGT+TGG - chr1_3:56822821-56822840 Msa0127470:intron 25.0%
!! TTTTCACTTTCTTGATCTTA+TGG - chr1_3:56822858-56822877 Msa0127470:CDS 25.0%
!! CAATATTGTTTGTTAGAACT+TGG + chr1_3:56822888-56822907 None:intergenic 25.0%
!!! AGGCTTTAAATATTCAATAG+CGG + chr1_3:56822927-56822946 None:intergenic 25.0%
!! ATTTTCATTTTCCAAAGACT+TGG + chr1_3:56823160-56823179 None:intergenic 25.0%
! AAAAAACGCAATATCTTTGT+TGG - chr1_3:56823234-56823253 Msa0127470:intron 25.0%
! TGAAATATGAGTAAACTTTG+AGG + chr1_3:56823650-56823669 None:intergenic 25.0%
! AAGAAGTAGGTTATGTTATA+AGG - chr1_3:56824127-56824146 Msa0127470:CDS 25.0%
!!! AGATTAGATACACTTTTTAG+TGG + chr1_3:56824189-56824208 None:intergenic 25.0%
! TACCTTTAAATCTAATCACA+AGG - chr1_3:56824235-56824254 Msa0127470:intron 25.0%
! ACCTTTAAATCTAATCACAA+GGG - chr1_3:56824236-56824255 Msa0127470:intron 25.0%
! TTACTTATAAGCTTATCTGT+AGG - chr1_3:56824283-56824302 Msa0127470:CDS 25.0%
! CTTCTGTTAATTGTATAACA+CGG - chr1_3:56824386-56824405 Msa0127470:intron 25.0%
! ACTAAAGATTATTAATCCCA+CGG + chr1_3:56824651-56824670 None:intergenic 25.0%
!!! TTGGTAATAATCCACAATTT+TGG - chr1_3:56824811-56824830 Msa0127470:intron 25.0%
! AATATCAATCTAGAGAACAA+GGG + chr1_3:56825081-56825100 None:intergenic 25.0%
! CTTATTCTCATATTCAATCT+AGG - chr1_3:56825101-56825120 Msa0127470:CDS 25.0%
! ATTTGTGAAACTACATTGAA+AGG + chr1_3:56825354-56825373 None:intergenic 25.0%
! ATACATGTCAAACATCATTA+TGG + chr1_3:56825497-56825516 None:intergenic 25.0%
! AATGATGTTTGACATGTATT+TGG - chr1_3:56825498-56825517 Msa0127470:intron 25.0%
! AGGACTTAAACTTAAACTAA+AGG + chr1_3:56825789-56825808 None:intergenic 25.0%
! TGCTACATATCAAAAACAAA+AGG + chr1_3:56826237-56826256 None:intergenic 25.0%
!!! TGAAGATAACTTTTTGAAGA+AGG + chr1_3:56826391-56826410 None:intergenic 25.0%
! ACAGTTTATGTGAAAATTTC+AGG - chr1_3:56826460-56826479 Msa0127470:intron 25.0%
!! ATGTGAAAATTTCAGGATTT+TGG - chr1_3:56826467-56826486 Msa0127470:intron 25.0%
! TAAGAAGTCACAAAATTGAT+TGG + chr1_3:56826997-56827016 None:intergenic 25.0%
AATAAGCAAACCTTACAAAG+GGG + chr1_3:56820890-56820909 None:intergenic 30.0%
GAAATAAGCAAACCTTACAA+AGG + chr1_3:56820892-56820911 None:intergenic 30.0%
AATCTCTATGATTATGCAGA+CGG - chr1_3:56820980-56820999 Msa0127470:intron 30.0%
ATACCAATCTTCAAGATGAT+TGG - chr1_3:56821060-56821079 Msa0127470:CDS 30.0%
AAACCAATCATCTTGAAGAT+TGG + chr1_3:56821066-56821085 None:intergenic 30.0%
CTAGACAAAATAAAACTGCA+AGG + chr1_3:56821175-56821194 None:intergenic 30.0%
CAATGCTATTATACTCAACA+AGG - chr1_3:56821214-56821233 Msa0127470:intron 30.0%
TAGTTAAATGAAAGGTGGTA+GGG + chr1_3:56821247-56821266 None:intergenic 30.0%
TTAGTTAAATGAAAGGTGGT+AGG + chr1_3:56821248-56821267 None:intergenic 30.0%
! ATTTTTACCTTTGTCTGAGT+AGG - chr1_3:56821342-56821361 Msa0127470:intron 30.0%
TCTGACAAATTAACTAACCT+GGG + chr1_3:56821475-56821494 None:intergenic 30.0%
ATCTGACAAATTAACTAACC+TGG + chr1_3:56821476-56821495 None:intergenic 30.0%
CACATACTATATAACTGGTT+AGG + chr1_3:56821549-56821568 None:intergenic 30.0%
CTAACCAGTTATATAGTATG+TGG - chr1_3:56821547-56821566 Msa0127470:intron 30.0%
GAATCCACATACTATATAAC+TGG + chr1_3:56821554-56821573 None:intergenic 30.0%
CCAAGAAAATGCAACATAAT+GGG + chr1_3:56821579-56821598 None:intergenic 30.0%
! CCATTATGTTGCATTTTCTT+GGG - chr1_3:56821577-56821596 Msa0127470:intron 30.0%
! ATTGGTGATACTAGTTATGA+AGG + chr1_3:56821634-56821653 None:intergenic 30.0%
TCGTACAAAACAAACGATTT+GGG + chr1_3:56821835-56821854 None:intergenic 30.0%
ATCGTACAAAACAAACGATT+TGG + chr1_3:56821836-56821855 None:intergenic 30.0%
GTCAACAACAACAAAAAAAG+TGG + chr1_3:56821946-56821965 None:intergenic 30.0%
CCTAAAGATTAAGCAAAATG+AGG + chr1_3:56822196-56822215 None:intergenic 30.0%
! CCTCATTTTGCTTAATCTTT+AGG - chr1_3:56822193-56822212 Msa0127470:intron 30.0%
! CATTTTGCTTAATCTTTAGG+AGG - chr1_3:56822196-56822215 Msa0127470:intron 30.0%
AAAAGAACCTGAAAAGAAAC+AGG - chr1_3:56822397-56822416 Msa0127470:intron 30.0%
AATCTCATACACAAATCTGT+CGG + chr1_3:56822477-56822496 None:intergenic 30.0%
! ATTCAACTATTTCTTGCTTC+AGG - chr1_3:56822494-56822513 Msa0127470:intron 30.0%
GAATATTGAAGCTTATGATG+CGG - chr1_3:56822520-56822539 Msa0127470:intron 30.0%
TCATCAAATATGTACAGGTA+TGG + chr1_3:56822632-56822651 None:intergenic 30.0%
AGTCATCATCAAATATGTAC+AGG + chr1_3:56822637-56822656 None:intergenic 30.0%
!! ATATTTGATGATGACTCTGA+TGG - chr1_3:56822641-56822660 Msa0127470:intron 30.0%
TATACGAAAGAGCGATATAA+TGG - chr1_3:56822743-56822762 Msa0127470:intron 30.0%
ATACGAAAGAGCGATATAAT+GGG - chr1_3:56822744-56822763 Msa0127470:intron 30.0%
GTTCTAACAAACAATATTGC+TGG - chr1_3:56822889-56822908 Msa0127470:CDS 30.0%
TGGTAAAAGCTTAAAGAATC+AGG + chr1_3:56822947-56822966 None:intergenic 30.0%
AGCTAACAATATTTGCTTAG+AGG - chr1_3:56822970-56822989 Msa0127470:intron 30.0%
! TTAGAGGCTAACTTAGATTT+TGG - chr1_3:56822986-56823005 Msa0127470:intron 30.0%
GTGAAAAAAAACCAAGTCTT+TGG - chr1_3:56823146-56823165 Msa0127470:CDS 30.0%
GCCAATCAAAATTTGATGTT+TGG - chr1_3:56823312-56823331 Msa0127470:intron 30.0%
!! GCCAAACATCAAATTTTGAT+TGG + chr1_3:56823316-56823335 None:intergenic 30.0%
AAAACGTAATACAGTAGACA+TGG - chr1_3:56823466-56823485 Msa0127470:intron 30.0%
TCAAACAGATTTGATGTGAA+AGG - chr1_3:56823730-56823749 Msa0127470:intron 30.0%
CAAACAGATTTGATGTGAAA+GGG - chr1_3:56823731-56823750 Msa0127470:intron 30.0%
TAAAACTGTCATGGATGAAA+TGG - chr1_3:56823861-56823880 Msa0127470:CDS 30.0%
! TTTTCACTCAGTCTAAAGAA+TGG - chr1_3:56823934-56823953 Msa0127470:intron 30.0%
CTTTCTTGTCTAAATCAAGT+TGG - chr1_3:56824080-56824099 Msa0127470:CDS 30.0%
ACCCTTGTGATTAGATTTAA+AGG + chr1_3:56824240-56824259 None:intergenic 30.0%
TTTAAATCTAATCACAAGGG+TGG - chr1_3:56824239-56824258 Msa0127470:intron 30.0%
CAAAAGATACAACTACTCTT+CGG + chr1_3:56824334-56824353 None:intergenic 30.0%
AACGGAGAAAATATACACTA+TGG - chr1_3:56824429-56824448 Msa0127470:intron 30.0%
!! GAAGAGTATCCTACATTTAA+AGG + chr1_3:56824624-56824643 None:intergenic 30.0%
! GTAATAATCCACAATTTTGG+TGG - chr1_3:56824814-56824833 Msa0127470:intron 30.0%
GAATATCAATCTAGAGAACA+AGG + chr1_3:56825082-56825101 None:intergenic 30.0%
TTCTCATATTCAATCTAGGA+TGG - chr1_3:56825105-56825124 Msa0127470:CDS 30.0%
! NNNNNNCTAATGGGTGTGAT+GGG + chr1_3:56825188-56825207 None:intergenic 30.0%
! NNNNNNNCTAATGGGTGTGA+TGG + chr1_3:56825189-56825208 None:intergenic 30.0%
AAAGCAATACAGAAGTTGTA+TGG - chr1_3:56825381-56825400 Msa0127470:CDS 30.0%
TTAAGAATAACCATGGTGAA+TGG - chr1_3:56825842-56825861 Msa0127470:intron 30.0%
TTTGCTTCTTTGCATGATTA+AGG + chr1_3:56826028-56826047 None:intergenic 30.0%
TTGTTTATCAGTATGTCTTG+AGG + chr1_3:56826061-56826080 None:intergenic 30.0%
!! TTAGTCTTCAATCTCACTTT+TGG - chr1_3:56826131-56826150 Msa0127470:intron 30.0%
CTTCTACATATGAAGATTGT+AGG - chr1_3:56826281-56826300 Msa0127470:intron 30.0%
! AATGAGTTGAAGACAAAGAA+TGG + chr1_3:56826437-56826456 None:intergenic 30.0%
! GATGAGTTTGTTTGTAGTTT+AGG + chr1_3:56826527-56826546 None:intergenic 30.0%
!! TGCAAAGTGTTGAGAAAAAA+AGG + chr1_3:56826681-56826700 None:intergenic 30.0%
!!! TTTTTTTCTCAACACTTTGC+AGG - chr1_3:56826680-56826699 Msa0127470:intron 30.0%
TATCATAAATACTCTCCACA+AGG + chr1_3:56826791-56826810 None:intergenic 30.0%
!!! TGAAGAAGTTTTTTGAAGTC+TGG - chr1_3:56826915-56826934 Msa0127470:CDS 30.0%
TTGCATAGCCAAATTATAGA+AGG - chr1_3:56827033-56827052 Msa0127470:five_prime_UTR 30.0%
TCTCTCATCCTTCTATAATT+TGG + chr1_3:56827044-56827063 None:intergenic 30.0%
GAGAGAGAGTAAAATATGAT+TGG - chr1_3:56827064-56827083 Msa0127470:five_prime_UTR 30.0%
CATAAACCGATTAGGATTAG+AGG - chr1_3:56820670-56820689 Msa0127470:three_prime_UTR 35.0%
CTTTCTCCTCTAATCCTAAT+CGG + chr1_3:56820679-56820698 None:intergenic 35.0%
CAAATGGAATCATGCGAATT+GGG + chr1_3:56820725-56820744 None:intergenic 35.0%
ATAAGCAAACCTTACAAAGG+GGG + chr1_3:56820889-56820908 None:intergenic 35.0%
TCTATCATACATGGAGTTGA+CGG - chr1_3:56821011-56821030 Msa0127470:intron 35.0%
!! TCTGCGTCATTTGATTTGAA+TGG - chr1_3:56821281-56821300 Msa0127470:intron 35.0%
AGTATAATCAGCCAAACAAC+TGG - chr1_3:56821412-56821431 Msa0127470:intron 35.0%
! CCCATTATGTTGCATTTTCT+TGG - chr1_3:56821576-56821595 Msa0127470:intron 35.0%
CCCAAGAAAATGCAACATAA+TGG + chr1_3:56821580-56821599 None:intergenic 35.0%
AATCTTGTGTTTGACTGCAT+TGG + chr1_3:56821652-56821671 None:intergenic 35.0%
!! AGATTTTAAGTAGGAGCAGT+AGG - chr1_3:56821667-56821686 Msa0127470:CDS 35.0%
TTGAAAGATCGTAAACACGA+GGG - chr1_3:56821693-56821712 Msa0127470:CDS 35.0%
ATCCATAGAAACAACTCCAA+TGG - chr1_3:56821805-56821824 Msa0127470:intron 35.0%
!!! GTTTTGGTAGTGATTCACAA+AGG + chr1_3:56821906-56821925 None:intergenic 35.0%
! TTTGCTTAATCTTTAGGAGG+AGG - chr1_3:56822199-56822218 Msa0127470:intron 35.0%
ATCATTGTGCACCATATCTT+TGG - chr1_3:56822230-56822249 Msa0127470:intron 35.0%
! TTTTGACCACACCAAAGATA+TGG + chr1_3:56822244-56822263 None:intergenic 35.0%
TTGGTGTGGTCAAAACATTA+TGG - chr1_3:56822249-56822268 Msa0127470:intron 35.0%
TGGTCAAAACATTATGGACA+AGG - chr1_3:56822255-56822274 Msa0127470:CDS 35.0%
GCGGTTTATATTCAACGATT+AGG - chr1_3:56822539-56822558 Msa0127470:intron 35.0%
!! TGTTTGTTGTAATCCTCGAA+TGG - chr1_3:56822701-56822720 Msa0127470:intron 35.0%
!! AAAGAGCGATATAATGGGTT+TGG - chr1_3:56822749-56822768 Msa0127470:intron 35.0%
GAACTGTACTATAACTAGAG+AGG + chr1_3:56822777-56822796 None:intergenic 35.0%
CTAACAAACAATATTGCTGG+AGG - chr1_3:56822892-56822911 Msa0127470:CDS 35.0%
AGCAAATATTGTTAGCTAGC+TGG + chr1_3:56822967-56822986 None:intergenic 35.0%
TAGATAAGCCATATCTCTGT+TGG - chr1_3:56823074-56823093 Msa0127470:intron 35.0%
TTAACGTTCCAACAGAGATA+TGG + chr1_3:56823085-56823104 None:intergenic 35.0%
ATCCTCAAAACTCAATCACA+CGG - chr1_3:56823337-56823356 Msa0127470:intron 35.0%
AGTTTGTAACCCACAAAACA+AGG - chr1_3:56823408-56823427 Msa0127470:intron 35.0%
GTTTGTAACCCACAAAACAA+GGG - chr1_3:56823409-56823428 Msa0127470:intron 35.0%
TTACATGTCTTTGACTGCAA+AGG + chr1_3:56823579-56823598 None:intergenic 35.0%
!! TATGAGTAAACTTTGAGGTC+AGG + chr1_3:56823645-56823664 None:intergenic 35.0%
!! TCCATGTATTTTGAACTCGA+TGG - chr1_3:56823688-56823707 Msa0127470:intron 35.0%
TCCATCGAGTTCAAAATACA+TGG + chr1_3:56823692-56823711 None:intergenic 35.0%
! TTGTGTTGGTAAAACTGTCA+TGG - chr1_3:56823852-56823871 Msa0127470:CDS 35.0%
CTAATTCTGACTGAAGAAGT+AGG - chr1_3:56824114-56824133 Msa0127470:CDS 35.0%
GTAGGTTATGTTATAAGGAC+AGG - chr1_3:56824132-56824151 Msa0127470:CDS 35.0%
! CGAAGAGTAGTTGTATCTTT+TGG - chr1_3:56824332-56824351 Msa0127470:CDS 35.0%
! TAGTTGTATCTTTTGGCGTT+GGG - chr1_3:56824339-56824358 Msa0127470:CDS 35.0%
AGCACCACTCAGTTAATAAT+CGG - chr1_3:56824583-56824602 Msa0127470:intron 35.0%
ACTTCCGATTATTAACTGAG+TGG + chr1_3:56824590-56824609 None:intergenic 35.0%
AAAATCATAGGGACTGATAC+AGG - chr1_3:56824678-56824697 Msa0127470:intron 35.0%
AAAATCCCACAATATGATGC+AGG + chr1_3:56824720-56824739 None:intergenic 35.0%
! GCATCATATTGTGGGATTTT+CGG - chr1_3:56824720-56824739 Msa0127470:intron 35.0%
TAATAGAGCCACCAAAATTG+TGG + chr1_3:56824825-56824844 None:intergenic 35.0%
!! ATTCGTTGTTCTAGAGGATA+TGG - chr1_3:56824864-56824883 Msa0127470:intron 35.0%
CTAGAGGATATGGAGAATAA+CGG - chr1_3:56824874-56824893 Msa0127470:intron 35.0%
CCAACTGCACTTAAAATCTT+TGG + chr1_3:56825143-56825162 None:intergenic 35.0%
!! CCAAAGATTTTAAGTGCAGT+TGG - chr1_3:56825140-56825159 Msa0127470:CDS 35.0%
TCTGCAATGATAATCTGAGT+AGG + chr1_3:56825306-56825325 None:intergenic 35.0%
TACTCAGATTATCATTGCAG+AGG - chr1_3:56825305-56825324 Msa0127470:intron 35.0%
GTATTAAGGCATGAAATCCT+TGG - chr1_3:56825574-56825593 Msa0127470:intron 35.0%
AATCCTTGGTGAATACATGA+AGG - chr1_3:56825588-56825607 Msa0127470:intron 35.0%
AGTATACAACATTCCATCAC+TGG - chr1_3:56825660-56825679 Msa0127470:intron 35.0%
AAGTCATCTTTGCTGAAGTA+GGG + chr1_3:56825739-56825758 None:intergenic 35.0%
AAAGTCATCTTTGCTGAAGT+AGG + chr1_3:56825740-56825759 None:intergenic 35.0%
AATGCAGTCAAACCTGATTT+AGG - chr1_3:56825868-56825887 Msa0127470:intron 35.0%
ATGCTCTTACTTCTCTTCTT+GGG - chr1_3:56825980-56825999 Msa0127470:intron 35.0%
TCGTGAAAATGGTTGCATAA+AGG + chr1_3:56826323-56826342 None:intergenic 35.0%
TTTGTTTGTAGTTTAGGTGG+AGG + chr1_3:56826521-56826540 None:intergenic 35.0%
! GAGTTTGTTTGTAGTTTAGG+TGG + chr1_3:56826524-56826543 None:intergenic 35.0%
ACAAACAAACTCATCAGACT+TGG - chr1_3:56826532-56826551 Msa0127470:intron 35.0%
! TTTAGCCTTCTGTCAATTGT+TGG - chr1_3:56826575-56826594 Msa0127470:intron 35.0%
AAACTCCAACAATTGACAGA+AGG + chr1_3:56826583-56826602 None:intergenic 35.0%
AGATCATTATACATCCCTAG+TGG + chr1_3:56826714-56826733 None:intergenic 35.0%
TTATCTTGCTCTGTGTCAGT+GGG + chr1_3:56820636-56820655 None:intergenic 40.0%
ATTATCTTGCTCTGTGTCAG+TGG + chr1_3:56820637-56820656 None:intergenic 40.0%
CTTTGCAGCATAAACCGATT+AGG - chr1_3:56820662-56820681 Msa0127470:three_prime_UTR 40.0%
GCAAATGGAATCATGCGAAT+TGG + chr1_3:56820726-56820745 None:intergenic 40.0%
AGGTAGGAAGGTTGAATGAA+GGG + chr1_3:56820764-56820783 None:intergenic 40.0%
ATTGGTGTAAACAGTGATCG+AGG + chr1_3:56820784-56820803 None:intergenic 40.0%
! GCTTCAATTGCATTTTACGC+TGG - chr1_3:56820807-56820826 Msa0127470:three_prime_UTR 40.0%
CATTTAACAGAAGAAGGTGG+AGG + chr1_3:56820866-56820885 None:intergenic 40.0%
TGTTAAATGCCCCCTTTGTA+AGG - chr1_3:56820877-56820896 Msa0127470:CDS 40.0%
! CATGTTTGAAGCCAGTTGTT+TGG + chr1_3:56821426-56821445 None:intergenic 40.0%
! CAAACAACTGGCTTCAAACA+TGG - chr1_3:56821424-56821443 Msa0127470:intron 40.0%
GTTGAAAGATCGTAAACACG+AGG - chr1_3:56821692-56821711 Msa0127470:CDS 40.0%
GTAACACGATTTGTAGGACA+GGG - chr1_3:56821718-56821737 Msa0127470:CDS 40.0%
! ACAAAACAAACGATTTGGGC+TGG + chr1_3:56821831-56821850 None:intergenic 40.0%
!!! TCGTTTGTTTTGTACGATCC+TGG - chr1_3:56821838-56821857 Msa0127470:intron 40.0%
!!! CTTTTGCAGATTTTGAGGTC+AGG + chr1_3:56821879-56821898 None:intergenic 40.0%
!! GTTCGCTTTTGCAGATTTTG+AGG + chr1_3:56821884-56821903 None:intergenic 40.0%
AGAACCTGAAAAGAAACAGG+AGG - chr1_3:56822400-56822419 Msa0127470:intron 40.0%
!! AACTCCTCCTGTTTCTTTTC+AGG + chr1_3:56822407-56822426 None:intergenic 40.0%
! AGAAACTTCAGTGTTTTCCC+CGG + chr1_3:56822576-56822595 None:intergenic 40.0%
TGTAAACAACTTCTGGTCCT+TGG + chr1_3:56822805-56822824 None:intergenic 40.0%
ATCTTTGTTGGATACACAGC+AGG - chr1_3:56823246-56823265 Msa0127470:intron 40.0%
ACACAGCAGGACAAAACAAT+TGG - chr1_3:56823259-56823278 Msa0127470:intron 40.0%
AGCAGGACAAAACAATTGGA+AGG - chr1_3:56823263-56823282 Msa0127470:intron 40.0%
TCCTCAAAACTCAATCACAC+GGG - chr1_3:56823338-56823357 Msa0127470:intron 40.0%
GATTAAGGAGCTTCTCTTCT+CGG + chr1_3:56823378-56823397 None:intergenic 40.0%
ATGGAAACAGCCTCAGAATA+TGG - chr1_3:56823485-56823504 Msa0127470:intron 40.0%
CATGAATGCTCCATATTCTG+AGG + chr1_3:56823498-56823517 None:intergenic 40.0%
! CTCAGAATATGGAGCATTCA+TGG - chr1_3:56823496-56823515 Msa0127470:intron 40.0%
TGAATTCAGAGGAAGATCAG+GGG + chr1_3:56823552-56823571 None:intergenic 40.0%
GTGAATTCAGAGGAAGATCA+GGG + chr1_3:56823553-56823572 None:intergenic 40.0%
AGTGAATTCAGAGGAAGATC+AGG + chr1_3:56823554-56823573 None:intergenic 40.0%
! AAAGGGTATGTAGCTGGATT+CGG - chr1_3:56823748-56823767 Msa0127470:intron 40.0%
! TTCTACTGCTCCAACAGTTT+TGG - chr1_3:56823807-56823826 Msa0127470:CDS 40.0%
! GACAGTTTTACCAACACAAG+TGG + chr1_3:56823851-56823870 None:intergenic 40.0%
TCATGGATGAAATGGCTTAC+AGG - chr1_3:56823869-56823888 Msa0127470:CDS 40.0%
GATGAAATGGCTTACAGGTT+TGG - chr1_3:56823874-56823893 Msa0127470:CDS 40.0%
! GTAGTTGTATCTTTTGGCGT+TGG - chr1_3:56824338-56824357 Msa0127470:CDS 40.0%
TCTTCTGCACAAGGATTTCT+AGG + chr1_3:56824459-56824478 None:intergenic 40.0%
AAGCTTGTGGATTTCTCTCT+AGG - chr1_3:56824528-56824547 Msa0127470:intron 40.0%
AGAGTTCCTGCATCATATTG+TGG - chr1_3:56824711-56824730 Msa0127470:intron 40.0%
GAGTTCCTGCATCATATTGT+GGG - chr1_3:56824712-56824731 Msa0127470:intron 40.0%
CATTGGAACAACTCCTGATT+TGG + chr1_3:56824772-56824791 None:intergenic 40.0%
CAAATCAGGAGTTGTTCCAA+TGG - chr1_3:56824770-56824789 Msa0127470:intron 40.0%
GTATCAAAACTCTGTGCCAT+TGG + chr1_3:56824789-56824808 None:intergenic 40.0%
!! GCACAGAGTTTTGATACTGT+TGG - chr1_3:56824792-56824811 Msa0127470:intron 40.0%
! TTGTGAGGCTACATTTTCGA+AGG + chr1_3:56825049-56825068 None:intergenic 40.0%
!! TCAATCTAGGATGGTTTGCT+AGG - chr1_3:56825114-56825133 Msa0127470:CDS 40.0%
!! CAATCTAGGATGGTTTGCTA+GGG - chr1_3:56825115-56825134 Msa0127470:CDS 40.0%
GCAATACAGAAGTTGTATGG+AGG - chr1_3:56825384-56825403 Msa0127470:CDS 40.0%
CTACTGCAGATGGTGTATTA+AGG - chr1_3:56825560-56825579 Msa0127470:intron 40.0%
ATACATGAAGGCCAAAGTTC+CGG - chr1_3:56825600-56825619 Msa0127470:intron 40.0%
CTCATGAAATGCTTCAAACC+CGG + chr1_3:56825622-56825641 None:intergenic 40.0%
AGTCAAACCTGATTTAGGTC+CGG - chr1_3:56825873-56825892 Msa0127470:intron 40.0%
GATGCTCTTACTTCTCTTCT+TGG - chr1_3:56825979-56825998 Msa0127470:intron 40.0%
TGCTCTTACTTCTCTTCTTG+GGG - chr1_3:56825981-56826000 Msa0127470:intron 40.0%
! ACTTGGAAATTTTTCGCGCT+AGG - chr1_3:56826549-56826568 Msa0127470:intron 40.0%
! CTTGGAAATTTTTCGCGCTA+GGG - chr1_3:56826550-56826569 Msa0127470:intron 40.0%
CTGTCAATTGTTGGAGTTTC+TGG - chr1_3:56826584-56826603 Msa0127470:CDS 40.0%
!! TGGAGTTTCTGGATTTTGTC+AGG - chr1_3:56826595-56826614 Msa0127470:CDS 40.0%
AGTGTTTCACAAACACGCAT+AGG + chr1_3:56826626-56826645 None:intergenic 40.0%
GAATTCATCTGCACCATTCT+TGG + chr1_3:56826760-56826779 None:intergenic 40.0%
TGAATTCTTGCTTCACCTTG+TGG - chr1_3:56826773-56826792 Msa0127470:CDS 40.0%
AATCATCTTGTCAGCTTTGC+TGG + chr1_3:56826831-56826850 None:intergenic 40.0%
TATCTTGCTCTGTGTCAGTG+GGG + chr1_3:56820635-56820654 None:intergenic 45.0%
AGGATTAGAGGAGAAAGCGA+TGG - chr1_3:56820682-56820701 Msa0127470:three_prime_UTR 45.0%
TCCATTTGCCCAATTTGCCT+TGG - chr1_3:56820737-56820756 Msa0127470:three_prime_UTR 45.0%
TCCAAGGCAAATTGGGCAAA+TGG + chr1_3:56820741-56820760 None:intergenic 45.0%
TGAAGGGTCCAAGGCAAATT+GGG + chr1_3:56820748-56820767 None:intergenic 45.0%
ATGAAGGGTCCAAGGCAAAT+TGG + chr1_3:56820749-56820768 None:intergenic 45.0%
AAGGTTGAATGAAGGGTCCA+AGG + chr1_3:56820757-56820776 None:intergenic 45.0%
GAGGTAGGAAGGTTGAATGA+AGG + chr1_3:56820765-56820784 None:intergenic 45.0%
AAACAGTGATCGAGGTAGGA+AGG + chr1_3:56820776-56820795 None:intergenic 45.0%
GTGTAAACAGTGATCGAGGT+AGG + chr1_3:56820780-56820799 None:intergenic 45.0%
GGGCATTTAACAGAAGAAGG+TGG + chr1_3:56820869-56820888 None:intergenic 45.0%
!! AGGGGGCATTTAACAGAAGA+AGG + chr1_3:56820872-56820891 None:intergenic 45.0%
GGCTTCAAACATGGTTGAGA+CGG - chr1_3:56821433-56821452 Msa0127470:intron 45.0%
GCTTCAAACATGGTTGAGAC+GGG - chr1_3:56821434-56821453 Msa0127470:intron 45.0%
GGAAATTCAAGCTCTTACCC+AGG - chr1_3:56821455-56821474 Msa0127470:intron 45.0%
AGGGTCGTAACACGATTTGT+AGG - chr1_3:56821712-56821731 Msa0127470:CDS 45.0%
CGTAACACGATTTGTAGGAC+AGG - chr1_3:56821717-56821736 Msa0127470:CDS 45.0%
!! GGCCATTGGAGTTGTTTCTA+TGG + chr1_3:56821810-56821829 None:intergenic 45.0%
! AGGATCGAGAGTTTTCTACC+AGG + chr1_3:56821859-56821878 None:intergenic 45.0%
TGTGCACCATATCTTTGGTG+TGG - chr1_3:56822235-56822254 Msa0127470:intron 45.0%
GTGAGACTTCTGCTCTCTAA+TGG + chr1_3:56822375-56822394 None:intergenic 45.0%
! GAAACTTCAGTGTTTTCCCC+GGG + chr1_3:56822575-56822594 None:intergenic 45.0%
ATTTACTACCACGCCATTCG+AGG + chr1_3:56822717-56822736 None:intergenic 45.0%
ATAGTACAGTTCCCCATCCA+AGG - chr1_3:56822785-56822804 Msa0127470:intron 45.0%
ACAACTTCTGGTCCTTGGAT+GGG + chr1_3:56822800-56822819 None:intergenic 45.0%
AACAACTTCTGGTCCTTGGA+TGG + chr1_3:56822801-56822820 None:intergenic 45.0%
!!! TGTGCCACTGACTTTTGGAT+TGG - chr1_3:56823290-56823309 Msa0127470:intron 45.0%
TTGGCCAATCCAAAAGTCAG+TGG + chr1_3:56823297-56823316 None:intergenic 45.0%
AACCCACAAAACAAGGGAAG+AGG - chr1_3:56823415-56823434 Msa0127470:intron 45.0%
!!! TGCCTCTTCCCTTGTTTTGT+GGG + chr1_3:56823420-56823439 None:intergenic 45.0%
GCACTGCTGTTATCATCTGT+GGG - chr1_3:56823437-56823456 Msa0127470:intron 45.0%
AGATCAGGGGAAGAAGAAGT+TGG + chr1_3:56823539-56823558 None:intergenic 45.0%
GCAAAGGTGAGTGAATTCAG+AGG + chr1_3:56823563-56823582 None:intergenic 45.0%
! GATGTGAAAGGGTATGTAGC+TGG - chr1_3:56823742-56823761 Msa0127470:intron 45.0%
! AAGGGTATGTAGCTGGATTC+GGG - chr1_3:56823749-56823768 Msa0127470:intron 45.0%
TGGATTCGGGAATCCTGATT+GGG - chr1_3:56823762-56823781 Msa0127470:intron 45.0%
TATAACACGGTACTCTGCTC+TGG - chr1_3:56824399-56824418 Msa0127470:intron 45.0%
CTCTGCTCTGGCAGTATAAA+CGG - chr1_3:56824411-56824430 Msa0127470:intron 45.0%
TAGAAGATCCTCCAGGTACT+CGG + chr1_3:56824482-56824501 None:intergenic 45.0%
ATCATAGGGACTGATACAGG+AGG - chr1_3:56824681-56824700 Msa0127470:intron 45.0%
TTCGGATTTCGTCCTTCTCA+TGG - chr1_3:56824738-56824757 Msa0127470:intron 45.0%
TTGGAGATTCTGCCATGAGA+AGG + chr1_3:56824753-56824772 None:intergenic 45.0%
CATGGCAGAATCTCCAAATC+AGG - chr1_3:56824756-56824775 Msa0127470:intron 45.0%
GGGTGAATTCGTTGTTCTAG+AGG - chr1_3:56824858-56824877 Msa0127470:intron 45.0%
! NNNCTAATGGGTGTGATGGG+TGG + chr1_3:56825185-56825204 None:intergenic 45.0%
GCTGTATACACTACTGCAGA+TGG - chr1_3:56825550-56825569 Msa0127470:intron 45.0%
TGGCCTTCATGTATTCACCA+AGG + chr1_3:56825594-56825613 None:intergenic 45.0%
TACATGAAGGCCAAAGTTCC+GGG - chr1_3:56825601-56825620 Msa0127470:intron 45.0%
ATGCTTCAAACCCGGAACTT+TGG + chr1_3:56825614-56825633 None:intergenic 45.0%
!! ATACCTCTGAAGCAATCGCA+TGG + chr1_3:56825701-56825720 None:intergenic 45.0%
CATCTTTGCTGAAGTAGGGA+TGG + chr1_3:56825735-56825754 None:intergenic 45.0%
! CTGCATTGATCCATTCACCA+TGG + chr1_3:56825855-56825874 None:intergenic 45.0%
GTCAAACCTGATTTAGGTCC+GGG - chr1_3:56825874-56825893 Msa0127470:intron 45.0%
GAAATTCCCGGACCTAAATC+AGG + chr1_3:56825883-56825902 None:intergenic 45.0%
!! GATACGCGTTCTGAAATTCC+CGG + chr1_3:56825895-56825914 None:intergenic 45.0%
ATTCTCCTCTGTTGTGCGTA+GGG + chr1_3:56825923-56825942 None:intergenic 45.0%
TATTCTCCTCTGTTGTGCGT+AGG + chr1_3:56825924-56825943 None:intergenic 45.0%
TTGCAGGTAAGCATACCACT+AGG - chr1_3:56826696-56826715 Msa0127470:intron 45.0%
TGCAGGTAAGCATACCACTA+GGG - chr1_3:56826697-56826716 Msa0127470:intron 45.0%
! AAGAAGGTGGAGGAGTATGG+TGG + chr1_3:56820856-56820875 None:intergenic 50.0%
CAGAAGAAGGTGGAGGAGTA+TGG + chr1_3:56820859-56820878 None:intergenic 50.0%
CACGCAACCTACTCAGACAA+AGG + chr1_3:56821352-56821371 None:intergenic 50.0%
CTTTGTCTGAGTAGGTTGCG+TGG - chr1_3:56821350-56821369 Msa0127470:intron 50.0%
!! AAACGATTTGGGCTGGCCAT+TGG + chr1_3:56821824-56821843 None:intergenic 50.0%
TCGGTTCTTGCTCCCAGAAA+AGG + chr1_3:56822458-56822477 None:intergenic 50.0%
GTTGTAATCCTCGAATGGCG+TGG - chr1_3:56822706-56822725 Msa0127470:intron 50.0%
CAACTTCTGGTCCTTGGATG+GGG + chr1_3:56822799-56822818 None:intergenic 50.0%
!!! GTGACTGTGCCACTGACTTT+TGG - chr1_3:56823285-56823304 Msa0127470:intron 50.0%
! GCCCGTGTGATTGAGTTTTG+AGG + chr1_3:56823342-56823361 None:intergenic 50.0%
!!! GTGCCTCTTCCCTTGTTTTG+TGG + chr1_3:56823421-56823440 None:intergenic 50.0%
GGCACTGCTGTTATCATCTG+TGG - chr1_3:56823436-56823455 Msa0127470:intron 50.0%
CTGCTGTTATCATCTGTGGG+TGG - chr1_3:56823440-56823459 Msa0127470:intron 50.0%
TCAGGGGAAGAAGAAGTTGG+TGG + chr1_3:56823536-56823555 None:intergenic 50.0%
CTGGATTCGGGAATCCTGAT+TGG - chr1_3:56823761-56823780 Msa0127470:intron 50.0%
TGATGAGTCCTTGCCCAATC+AGG + chr1_3:56823778-56823797 None:intergenic 50.0%
TGATTGGGCAAGGACTCATC+AGG - chr1_3:56823777-56823796 Msa0127470:CDS 50.0%
CTCAGGACAGCCAAAACTGT+TGG + chr1_3:56823820-56823839 None:intergenic 50.0%
GTACCTGGAGGATCTTCTAG+TGG - chr1_3:56824483-56824502 Msa0127470:intron 50.0%
! TGCAGTTGGTGCAAAGCTTG+TGG - chr1_3:56824515-56824534 Msa0127470:intron 50.0%
TAGGATACTCTTCTGCTCCG+TGG - chr1_3:56824631-56824650 Msa0127470:intron 50.0%
AGGATACTCTTCTGCTCCGT+GGG - chr1_3:56824632-56824651 Msa0127470:intron 50.0%
CAAGGGCTCAACAACTTGTG+AGG + chr1_3:56825064-56825083 None:intergenic 50.0%
! CTTGAAAGTGCAGCCAGTGA+TGG + chr1_3:56825676-56825695 None:intergenic 50.0%
TGTAGTTTAGGTGGAGGACC+TGG + chr1_3:56826515-56826534 None:intergenic 50.0%
TCTCCCTGCATCAGTTTCTC+TGG - chr1_3:56826731-56826750 Msa0127470:intron 50.0%
CCACCAGAGAAACTGATGCA+GGG + chr1_3:56826737-56826756 None:intergenic 50.0%
GTTTCTCTGGTGGCCAAGAA+TGG - chr1_3:56826744-56826763 Msa0127470:intron 50.0%
! TGGAGGAGTATGGTGGCGTT+TGG + chr1_3:56820849-56820868 None:intergenic 55.0%
!! TGTCAGTCTCTGAAGCAGCC+AGG - chr1_3:56822432-56822451 Msa0127470:intron 55.0%
! TGAAGCAGCCAGGCCTTTTC+TGG - chr1_3:56822442-56822461 Msa0127470:intron 55.0%
! GAAGCAGCCAGGCCTTTTCT+GGG - chr1_3:56822443-56822462 Msa0127470:intron 55.0%
TCTTGCTCCCAGAAAAGGCC+TGG + chr1_3:56822453-56822472 None:intergenic 55.0%
CGATTAGGATGGAGCTCACC+CGG - chr1_3:56822554-56822573 Msa0127470:intron 55.0%
GATTAGGATGGAGCTCACCC+GGG - chr1_3:56822555-56822574 Msa0127470:intron 55.0%
ATTAGGATGGAGCTCACCCG+GGG - chr1_3:56822556-56822575 Msa0127470:intron 55.0%
TCGGGAATCCTGATTGGGCA+AGG - chr1_3:56823767-56823786 Msa0127470:CDS 55.0%
!!! GTTTTGGCTGTCCTGAGTGC+AGG - chr1_3:56823823-56823842 Msa0127470:CDS 55.0%
!! AGTGCAGGTGCCACTTGTGT+TGG - chr1_3:56823838-56823857 Msa0127470:CDS 55.0%
GGTACTCGGTCTTCTGCACA+AGG + chr1_3:56824468-56824487 None:intergenic 55.0%
TGTGCAGAAGACCGAGTACC+TGG - chr1_3:56824468-56824487 Msa0127470:intron 55.0%
GAGCCACTAGAAGATCCTCC+AGG + chr1_3:56824489-56824508 None:intergenic 55.0%
! AGTGGCTCTGCTGTTGCAGT+TGG - chr1_3:56824501-56824520 Msa0127470:intron 55.0%
GTGCCATGCGATTGCTTCAG+AGG - chr1_3:56825695-56825714 Msa0127470:intron 55.0%
AGATGCCCTACGCACAACAG+AGG - chr1_3:56825915-56825934 Msa0127470:intron 55.0%
CTCATGATCCCCACAGTTCC+AGG - chr1_3:56826494-56826513 Msa0127470:intron 55.0%
CCCTGCATCAGTTTCTCTGG+TGG - chr1_3:56826734-56826753 Msa0127470:intron 55.0%
GCCACCAGAGAAACTGATGC+AGG + chr1_3:56826738-56826757 None:intergenic 55.0%
CACAAGTGGCACCTGCACTC+AGG + chr1_3:56823837-56823856 None:intergenic 60.0%
GCAGAAGACCGAGTACCTGG+AGG - chr1_3:56824471-56824490 Msa0127470:intron 60.0%
GTGGAGGACCTGGAACTGTG+GGG + chr1_3:56826505-56826524 None:intergenic 60.0%
GGTGGAGGACCTGGAACTGT+GGG + chr1_3:56826506-56826525 None:intergenic 60.0%
AGGTGGAGGACCTGGAACTG+TGG + chr1_3:56826507-56826526 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 56820569 56827088 56820569 ID=Msa0127470;Name=Msa0127470
chr1_3 mRNA 56820569 56827088 56820569 ID=Msa0127470-mRNA-1;Parent=Msa0127470;Name=Msa0127470-mRNA-1;_AED=0.19;_eAED=0.19;_QI=132|0.8|0.75|1|1|1|16|264|693
chr1_3 exon 56820569 56820955 56820569 ID=Msa0127470-mRNA-1:exon:18007;Parent=Msa0127470-mRNA-1
chr1_3 exon 56821041 56821175 56821041 ID=Msa0127470-mRNA-1:exon:18006;Parent=Msa0127470-mRNA-1
chr1_3 exon 56821655 56821823 56821655 ID=Msa0127470-mRNA-1:exon:18005;Parent=Msa0127470-mRNA-1
chr1_3 exon 56821941 56822088 56821941 ID=Msa0127470-mRNA-1:exon:18004;Parent=Msa0127470-mRNA-1
chr1_3 exon 56822252 56822332 56822252 ID=Msa0127470-mRNA-1:exon:18003;Parent=Msa0127470-mRNA-1
chr1_3 exon 56822844 56822969 56822844 ID=Msa0127470-mRNA-1:exon:18002;Parent=Msa0127470-mRNA-1
chr1_3 exon 56823108 56823232 56823108 ID=Msa0127470-mRNA-1:exon:18001;Parent=Msa0127470-mRNA-1
chr1_3 exon 56823767 56823919 56823767 ID=Msa0127470-mRNA-1:exon:18000;Parent=Msa0127470-mRNA-1
chr1_3 exon 56824063 56824177 56824063 ID=Msa0127470-mRNA-1:exon:17999;Parent=Msa0127470-mRNA-1
chr1_3 exon 56824253 56824389 56824253 ID=Msa0127470-mRNA-1:exon:17998;Parent=Msa0127470-mRNA-1
chr1_3 exon 56825021 56825278 56825021 ID=Msa0127470-mRNA-1:exon:17997;Parent=Msa0127470-mRNA-1
chr1_3 exon 56825381 56825442 56825381 ID=Msa0127470-mRNA-1:exon:17996;Parent=Msa0127470-mRNA-1
chr1_3 exon 56826181 56826293 56826181 ID=Msa0127470-mRNA-1:exon:17995;Parent=Msa0127470-mRNA-1
chr1_3 exon 56826422 56826477 56826422 ID=Msa0127470-mRNA-1:exon:17994;Parent=Msa0127470-mRNA-1
chr1_3 exon 56826576 56826658 56826576 ID=Msa0127470-mRNA-1:exon:17993;Parent=Msa0127470-mRNA-1
chr1_3 exon 56826759 56827088 56826759 ID=Msa0127470-mRNA-1:exon:17992;Parent=Msa0127470-mRNA-1
chr1_3 five_prime_UTR 56826957 56827088 56826957 ID=Msa0127470-mRNA-1:five_prime_utr;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56826759 56826956 56826759 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56826576 56826658 56826576 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56826422 56826477 56826422 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56826181 56826293 56826181 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56825381 56825442 56825381 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56825021 56825278 56825021 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56824253 56824389 56824253 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56824063 56824177 56824063 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56823767 56823919 56823767 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56823108 56823232 56823108 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56822844 56822969 56822844 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56822252 56822332 56822252 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56821941 56822088 56821941 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56821655 56821823 56821655 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56821041 56821175 56821041 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 CDS 56820833 56820955 56820833 ID=Msa0127470-mRNA-1:cds;Parent=Msa0127470-mRNA-1
chr1_3 three_prime_UTR 56820569 56820832 56820569 ID=Msa0127470-mRNA-1:three_prime_utr;Parent=Msa0127470-mRNA-1
Gene Sequence

>Msa0127470

ATGGAAAATGAATCATCAGCTCCCAATTCGCATGATTCCATTTGCCCAATTTGCCTTGGACCCTTCATTCAACCTTCCTACCTCGATCACTGTTTACACCAATTTTGCTTCAATTGCATTTTACGCTGGATCAAAGTTGTGTCTTCCAAACGCCACCATACTCCTCCACCTTCTTCTGTTAAATGCCCCCTTTGTAAGACGGATAATTTTTCTATCATACATGGAGTTGACGGAACTTCCTTTCAACGTCATTATATAAATACCAATCTTCAAGATGATTGTTTTATTTTGTCTAGAGCACACAGATATAGATTACAATGCTATTATACTCAACAAGGTTGCGTGGAAGACATATTCAATGTATCACAATATTGGAAATCTTACAAGTATAATCAGCCAAACAACTGGCTTCAAACATGGTTGAGACGGGAAATTCAAGCTCTTACCCAGGAGGAGGATGTTGACATCATTGTGCACCATATCTTTGGTGTGGTCAAAACATTATGGACAAGAGAGCAGAAGTCTCACATAAAAGAACCTGAAAAGAAACAGGAGGAGTTCATGATGTCAGTCTCTGAAGCAGCCAGGCCTTTTCTGGGAGCAAGAACCGACAGATTTGTGTATGAGATTCAACTATTTCTTGCTTCAGGATTGAATATTGAAGCTTATGATGCGGTTTATATTCAACGATTAGGATGGAGCTCACCCGGGGAAAACACTGAAGTTTCTCAAAATGAATTGGTTGATCGCACTACTGTGATTCCATACCTGACAAAACAATTGGAAGGTGACTGTGCCACTGACTTTTGGATTGGCCAATCAAAATTTGATGTTTGGCTATCCTCAAAACTCAATCACACGGGCAGTGAAATTTGTACCGAGAAGAGAAGCTCCTTAATCAATCATTTAGACATGGAAACAGCCTCAGAATATGGAGCATTCATGGAGAAATTTATTTTACCACCAACTTCTTCTTCCCCTGATCTTCCTCTGAATTCACTCACCTTTGCAGTCAAAGACATATTTGATGTGAAAGGGTATGTAGCTGGATTCGGGAATCCTGATTGGGCAAGGACTCATCAGGCTGCTACTTCTACTGCTCCAACAGTTTTGGCTGTCCTGAGTGCAGGTGCCACTTGTGTTGGTAAAACTGTCATGGATGAAATGGCTTACAGTATAAACGGAGAAAATATACACTATGGCACGCCTAGAAATCCTTGTGCAGAAGACCGAGTACCTGGAGGATCTTCTAGTGGCTCTGCTGTTGCAGTTGGTGCAAAGCTTGTGGATTTCTCTCTAGGGACTGATACAGGAGGAAGTGTAAGAGTTCCTGCATCATATTGTGGGATTTTCGGATTTCGTCCTTCTCATGGCAGAATCTCCAAATCAGGAGTTGTTCCAATGGCACAGAGTTTTGATACTGTTGAGGATTGTTTTCAGCTTTCAAGTGTTCCTTTCAATGTAGTTTCACAAATTGTCATCAAAGCAATACAGAAGTTGTATGGAGATGGTGTATTAAGGCATGAAATCCTTGGTGAATACATGAAGGCCAAAGTTCCGGGTTTGAAGCATTTCATGAGTGAAGAGAAAACAGACGAAGTATACAACATTCCATCACTGGCTGCACTTTCAAGTGCCATGCGATTGCTTCAGAGGTATGAATTTAAGAATAACCATGGTGAATGGATCAATGCAGTCAAACCTGATTTAGGTCCGGGAATTTCAGAACGCGTATCAGATGCCCTACGCACAACAGAGGAGAATATTGATATCTGTCATTCTATAATAAGGGAGTTGCGTGATGCTCTTACTTCTCTTCTTGGGGATTTTGGCGTTCTCATGATCCCCACAGTTCCAGGTCCTCCACCTAAACTACAAACAAACTCATCAGACTTGGAAATTTTTCGCGCTAGGGCTTTTAGCCTTCTGTCAATTGTTGGAGTTTCTGGATTTTGTCAGGTAAGCATACCACTAGGGATGTATAATGATCTCCCTGCATCAGTTTCTCTGGTGGCCAAGAATGGTGCAGATGAATTCTTGCTTCACCTTGTGGAGAGTATTTATGATAACATTGAAAAATAG
Protein sequence

>Msa0127470

MENESSAPNSHDSICPICLGPFIQPSYLDHCLHQFCFNCILRWIKVVSSKRHHTPPPSSVKCPLCKTDNFSIIHGVDGTSFQRHYINTNLQDDCFILSRAHRYRLQCYYTQQGCVEDIFNVSQYWKSYKYNQPNNWLQTWLRREIQALTQEEDVDIIVHHIFGVVKTLWTREQKSHIKEPEKKQEEFMMSVSEAARPFLGARTDRFVYEIQLFLASGLNIEAYDAVYIQRLGWSSPGENTEVSQNELVDRTTVIPYLTKQLEGDCATDFWIGQSKFDVWLSSKLNHTGSEICTEKRSSLINHLDMETASEYGAFMEKFILPPTSSSPDLPLNSLTFAVKDIFDVKGYVAGFGNPDWARTHQAATSTAPTVLAVLSAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAEDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGRISKSGVVPMAQSFDTVEDCFQLSSVPFNVVSQIVIKAIQKLYGDGVLRHEILGEYMKAKVPGLKHFMSEEKTDEVYNIPSLAALSSAMRLLQRYEFKNNHGEWINAVKPDLGPGISERVSDALRTTEENIDICHSIIRELRDALTSLLGDFGVLMIPTVPGPPPKLQTNSSDLEIFRARAFSLLSIVGVSGFCQVSIPLGMYNDLPASVSLVAKNGADEFLLHLVESIYDNIEK*