AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0129090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129090 MtrunA17_Chr1g0195731 97.902 1239 21 2 1 1234 1 1239 0.0 2484
Msa0129090 MtrunA17_Chr1g0195741 71.313 1234 314 15 27 1234 24 1243 0.0 1722
Msa0129090 MtrunA17_Chr3g0116131 57.042 1136 423 17 112 1234 124 1207 0.0 1159
Msa0129090 MtrunA17_Chr5g0397121 43.178 623 254 8 673 1234 245 828 1.61e-156 489
Msa0129090 MtrunA17_Chr5g0397121 45.238 84 44 1 418 501 54 135 2.33e-14 78.2
Msa0129090 MtrunA17_Chr8g0387641 41.022 646 258 8 673 1234 241 847 1.13e-152 480
Msa0129090 MtrunA17_Chr6g0462581 42.439 615 261 9 673 1234 239 813 1.49e-150 473
Msa0129090 MtrunA17_Chr6g0462581 40.426 94 54 1 408 501 45 136 4.51e-14 77.4
Msa0129090 MtrunA17_Chr4g0038101 48.786 453 220 2 780 1232 573 1013 2.19e-144 463
Msa0129090 MtrunA17_Chr4g0038101 29.902 204 97 6 315 502 85 258 2.43e-11 68.6
Msa0129090 MtrunA17_Chr1g0202381 39.967 608 276 8 673 1234 221 785 3.39e-133 426
Msa0129090 MtrunA17_Chr1g0202371 46.830 489 235 10 764 1234 232 713 3.67e-129 413
Msa0129090 MtrunA17_Chr1g0202371 41.860 86 48 1 418 501 49 134 1.51e-11 68.9
Msa0129090 MtrunA17_Chr1g0204031 49.468 376 169 4 872 1234 507 874 3.16e-111 369
Msa0129090 MtrunA17_Chr3g0127401 51.211 289 133 4 896 1183 47 328 2.78e-89 294
Msa0129090 MtrunA17_Chr3g0127431 51.111 270 129 2 905 1174 60 326 3.61e-87 288
Msa0129090 MtrunA17_Chr6g0459561 44.816 299 142 7 926 1220 379 658 2.59e-68 243
Msa0129090 MtrunA17_Chr6g0459541 41.433 321 140 9 929 1220 42 343 1.98e-64 223
Msa0129090 MtrunA17_Chr4g0004121 41.946 298 156 5 912 1203 226 512 8.43e-64 226
Msa0129090 MtrunA17_Chr7g0246111 42.000 300 159 7 929 1220 212 504 1.87e-61 219
Msa0129090 MtrunA17_Chr4g0052271 45.560 259 131 5 929 1183 119 371 8.27e-60 211
Msa0129090 MtrunA17_Chr6g0459551 38.580 324 143 9 929 1219 102 402 7.34e-54 194
Msa0129090 MtrunA17_Chr2g0321241 45.205 219 115 4 929 1146 132 346 3.57e-53 193
Msa0129090 MtrunA17_Chr4g0026631 44.749 219 116 4 929 1146 127 341 1.25e-52 191
Msa0129090 MtrunA17_Chr6g0459531 38.435 294 135 10 929 1220 67 316 1.08e-47 173
Msa0129090 MtrunA17_Chr1g0180791 37.294 303 173 8 929 1220 478 774 1.57e-46 181
Msa0129090 MtrunA17_Chr1g0180791 42.672 232 127 4 929 1158 205 432 7.86e-45 175
Msa0129090 MtrunA17_Chr7g0264521 41.667 240 132 6 930 1164 480 716 8.26e-46 178
Msa0129090 MtrunA17_Chr7g0264521 42.241 232 128 4 929 1158 206 433 2.23e-44 174
Msa0129090 MtrunA17_Chr2g0327121 41.909 241 132 6 929 1164 480 717 1.49e-45 177
Msa0129090 MtrunA17_Chr2g0327121 40.948 232 131 4 929 1158 207 434 7.74e-42 166
Msa0129090 MtrunA17_Chr3g0145011 37.118 229 139 4 929 1154 139 365 2.30e-41 157
Msa0129090 MtrunA17_Chr1g0182711 38.961 231 132 5 930 1155 189 415 2.34e-41 158
Msa0129090 MtrunA17_Chr7g0262801 39.394 231 131 5 930 1155 188 414 2.36e-41 158
Msa0129090 MtrunA17_Chr7g0255641 37.729 273 140 6 929 1198 658 903 3.23e-41 165
Msa0129090 MtrunA17_Chr7g0255641 32.210 267 150 10 963 1221 423 666 8.20e-27 119
Msa0129090 MtrunA17_Chr3g0141901 36.364 231 138 5 929 1154 136 362 1.10e-40 155
Msa0129090 MtrunA17_Chr1g0192151 38.428 229 132 5 931 1154 169 393 1.35e-40 155
Msa0129090 MtrunA17_Chr4g0014731 38.428 229 132 5 931 1154 170 394 1.53e-40 155
Msa0129090 MtrunA17_Chr7g0255721 38.696 230 135 4 929 1155 685 911 3.33e-40 161
Msa0129090 MtrunA17_Chr7g0255721 31.273 275 165 6 968 1221 422 693 1.06e-28 124
Msa0129090 MtrunA17_Chr8g0362771 33.225 307 169 7 921 1223 229 503 8.40e-39 155
Msa0129090 MtrunA17_Chr4g0050561 36.207 232 138 5 930 1155 157 384 8.73e-38 147
Msa0129090 MtrunA17_Chr7g0255651 38.235 238 140 4 929 1162 282 516 1.11e-37 150
Msa0129090 MtrunA17_Chr7g0255651 27.007 274 171 7 954 1220 38 289 1.50e-13 75.1
Msa0129090 MtrunA17_Chr3g0135721 34.354 294 169 9 862 1149 166 441 1.33e-37 152
Msa0129090 MtrunA17_Chr8g0345461 36.364 231 138 5 929 1154 165 391 2.65e-37 146
Msa0129090 MtrunA17_Chr2g0277831 34.539 304 183 8 928 1220 242 540 3.62e-37 151
Msa0129090 MtrunA17_Chr2g0277831 34.335 233 145 5 929 1157 533 761 2.85e-32 135
Msa0129090 MtrunA17_Chr3g0135761 36.131 274 151 9 882 1149 184 439 3.30e-36 147
Msa0129090 MtrunA17_Chr7g0217421 37.975 237 137 6 928 1159 38 269 4.42e-36 142
Msa0129090 MtrunA17_Chr1g0200081 36.364 231 137 6 929 1154 175 400 1.73e-35 141
Msa0129090 MtrunA17_Chr4g0052411 38.767 227 129 6 928 1149 228 449 5.34e-35 143
Msa0129090 MtrunA17_Chr5g0429571 38.224 259 140 9 929 1172 313 566 9.08e-35 143
Msa0129090 MtrunA17_Chr3g0104211 39.574 235 129 7 929 1155 304 533 1.49e-34 143
Msa0129090 MtrunA17_Chr2g0297281 38.326 227 130 6 928 1149 285 506 1.69e-34 142
Msa0129090 MtrunA17_Chr4g0043381 34.008 247 150 6 931 1170 839 1079 2.81e-34 143
Msa0129090 MtrunA17_Chr6g0456351 38.723 235 135 6 924 1154 312 541 7.87e-34 139
Msa0129090 MtrunA17_Chr7g0255901 36.444 225 135 6 929 1148 639 860 8.32e-34 141
Msa0129090 MtrunA17_Chr3g0143721 36.400 250 147 7 922 1166 244 486 8.77e-34 140
Msa0129090 MtrunA17_Chr7g0248361 37.607 234 133 7 929 1154 192 420 3.15e-33 137
Msa0129090 MtrunA17_Chr5g0432631 36.245 229 139 4 923 1149 223 446 1.16e-32 137
Msa0129090 MtrunA17_Chr2g0331161 36.752 234 138 6 927 1155 413 641 3.21e-32 135
Msa0129090 MtrunA17_Chr3g0094871 34.766 256 154 8 929 1177 11 260 3.90e-32 131
Msa0129090 MtrunA17_Chr4g0031821 36.481 233 137 6 929 1154 320 548 6.05e-32 134
Msa0129090 MtrunA17_Chr7g0260601 36.481 233 137 6 929 1154 240 468 7.41e-32 134
Msa0129090 MtrunA17_Chr1g0158881 36.402 239 139 7 915 1149 316 545 9.88e-32 134
Msa0129090 MtrunA17_Chr4g0033451 36.546 249 143 7 926 1166 377 618 1.74e-31 134
Msa0129090 MtrunA17_Chr7g0255691 35.931 231 141 4 929 1155 286 513 1.93e-31 131
Msa0129090 MtrunA17_Chr7g0255691 31.250 288 161 9 944 1220 32 293 4.94e-22 102
Msa0129090 MtrunA17_Chr2g0327231 43.293 164 88 4 929 1090 346 506 5.35e-31 129
Msa0129090 MtrunA17_Chr2g0327231 43.956 91 46 2 929 1019 153 238 1.21e-12 72.0
Msa0129090 MtrunA17_Chr3g0108321 39.362 188 107 4 929 1112 159 343 7.34e-31 125
Msa0129090 MtrunA17_Chr3g0086411 31.061 264 158 7 929 1172 215 474 8.29e-31 128
Msa0129090 MtrunA17_Chr3g0086411 28.037 214 141 6 1018 1218 7 220 6.04e-14 76.3
Msa0129090 MtrunA17_Chr6g0476861 35.622 233 139 6 929 1154 197 425 6.04e-30 127
Msa0129090 MtrunA17_Chr8g0388371 34.440 241 140 6 928 1155 403 638 9.03e-30 128
Msa0129090 MtrunA17_Chr2g0289231 32.328 232 135 7 929 1148 297 518 4.32e-29 124
Msa0129090 MtrunA17_Chr5g0432641 35.470 234 140 6 920 1149 182 408 6.95e-29 124
Msa0129090 MtrunA17_Chr8g0357301 36.842 228 124 8 939 1154 480 699 1.44e-27 121
Msa0129090 MtrunA17_Chr3g0135781 37.427 171 98 5 923 1091 49 212 1.78e-25 105
Msa0129090 MtrunA17_Chr3g0129971 34.167 240 146 6 928 1158 295 531 2.00e-25 114
Msa0129090 MtrunA17_Chr3g0086401 29.181 281 173 8 850 1119 308 573 3.82e-25 112
Msa0129090 MtrunA17_Chr3g0086401 31.068 309 180 11 931 1218 94 390 3.62e-21 99.8
Msa0129090 MtrunA17_Chr2g0316851 30.000 310 177 12 901 1177 549 851 6.49e-25 113
Msa0129090 MtrunA17_Chr1g0204051 52.632 76 35 1 1059 1134 1 75 2.05e-20 86.7
Msa0129090 MtrunA17_Chr4g0047411 32.843 204 113 7 965 1149 211 409 1.05e-19 95.1
Msa0129090 MtrunA17_Chr1g0168321 33.974 156 92 5 1007 1154 203 355 9.74e-17 85.1
Msa0129090 MtrunA17_Chr6g0450161 29.665 209 113 6 966 1147 362 563 4.14e-15 80.1
Msa0129090 MtrunA17_Chr1g0190401 30.729 192 116 8 929 1111 677 860 5.00e-15 80.5
Msa0129090 MtrunA17_Chr4g0039781 29.048 210 114 6 966 1147 368 570 8.81e-14 75.9
Msa0129090 MtrunA17_Chr5g0432391 33.566 143 90 3 1009 1149 82 221 1.18e-13 74.7
Msa0129090 MtrunA17_Chr5g0404291 32.414 145 88 5 966 1107 387 524 6.59e-13 73.2
Msa0129090 MtrunA17_Chr4g0062081 44.048 84 45 2 928 1010 6 88 1.17e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129090 AT4G02480.1 63.492 1134 386 17 116 1234 145 1265 0.0 1382
Msa0129090 AT1G02890.1 58.805 1272 460 23 1 1234 1 1246 0.0 1364
Msa0129090 AT1G02890.2 56.604 1272 460 24 1 1234 1 1218 0.0 1290
Msa0129090 AT4G24860.4 50.539 928 384 13 338 1233 210 1094 0.0 812
Msa0129090 AT4G24860.2 49.682 942 394 13 338 1233 210 1117 0.0 803
Msa0129090 AT1G62130.2 50.060 835 321 16 407 1234 291 1036 0.0 739
Msa0129090 AT1G62130.2 28.502 207 109 3 8 213 22 190 8.86e-13 73.6
Msa0129090 AT1G62130.1 49.940 835 329 15 407 1234 291 1043 0.0 738
Msa0129090 AT1G62130.1 28.502 207 109 3 8 213 22 190 8.30e-13 73.9
Msa0129090 AT4G24860.1 58.517 634 225 6 607 1233 519 1121 0.0 707
Msa0129090 AT4G24860.1 39.037 187 99 3 338 509 201 387 5.49e-24 110
Msa0129090 AT4G24860.3 58.360 634 224 6 607 1233 519 1119 0.0 706
Msa0129090 AT4G24860.3 39.037 187 99 3 338 509 201 387 5.21e-24 110
Msa0129090 AT1G64110.1 42.557 618 260 8 673 1234 246 824 9.81e-156 488
Msa0129090 AT1G64110.1 44.706 85 45 1 417 501 50 132 1.50e-14 79.3
Msa0129090 AT1G64110.5 42.557 618 260 8 673 1234 249 827 1.07e-155 488
Msa0129090 AT1G64110.5 44.706 85 45 1 417 501 55 137 1.38e-14 79.3
Msa0129090 AT1G64110.3 42.557 618 260 8 673 1234 249 827 1.07e-155 488
Msa0129090 AT1G64110.3 44.706 85 45 1 417 501 55 137 1.38e-14 79.3
Msa0129090 AT1G64110.2 42.557 618 260 8 673 1234 251 829 1.11e-155 488
Msa0129090 AT1G64110.2 44.706 85 45 1 417 501 55 137 1.37e-14 79.3
Msa0129090 AT1G64110.4 42.557 618 260 8 673 1234 251 829 1.11e-155 488
Msa0129090 AT1G64110.4 44.706 85 45 1 417 501 55 137 1.37e-14 79.3
Msa0129090 AT3G19740.1 35.964 887 460 21 406 1232 155 993 1.10e-153 487
Msa0129090 AT5G52882.1 42.697 623 255 11 673 1234 248 829 4.46e-151 475
Msa0129090 AT5G52882.1 40.426 94 54 1 408 501 44 135 5.49e-13 74.3
Msa0129090 AT4G28000.2 42.147 624 261 10 673 1234 247 832 1.44e-150 474
Msa0129090 AT4G28000.2 41.489 94 53 1 408 501 44 135 6.95e-14 77.0
Msa0129090 AT4G28000.1 42.122 622 262 10 673 1234 247 830 6.24e-150 473
Msa0129090 AT4G28000.1 41.489 94 53 1 408 501 44 135 6.88e-14 77.0
Msa0129090 AT1G50140.2 35.892 886 464 22 406 1232 141 981 4.18e-147 469
Msa0129090 AT1G50140.5 35.892 886 464 22 406 1232 141 981 4.18e-147 469
Msa0129090 AT1G50140.3 46.916 454 229 3 779 1232 562 1003 1.18e-132 431
Msa0129090 AT1G50140.3 40.816 98 57 1 406 502 141 238 4.69e-12 71.2
Msa0129090 AT1G50140.1 46.916 454 229 3 779 1232 562 1003 1.18e-132 431
Msa0129090 AT1G50140.1 40.816 98 57 1 406 502 141 238 4.69e-12 71.2
Msa0129090 AT1G50140.4 46.916 454 229 3 779 1232 562 1003 1.18e-132 431
Msa0129090 AT1G50140.4 40.816 98 57 1 406 502 141 238 4.69e-12 71.2
Msa0129090 AT4G28000.3 40.816 588 248 10 673 1198 247 796 8.69e-132 423
Msa0129090 AT4G28000.3 41.489 94 53 1 408 501 44 135 5.86e-14 77.4
Msa0129090 AT4G27680.1 50.735 272 133 1 891 1162 43 313 4.12e-89 294
Msa0129090 AT5G53540.1 49.632 272 136 1 891 1162 46 316 2.02e-87 290
Msa0129090 AT3G27120.1 44.108 297 147 7 926 1220 397 676 2.18e-65 236
Msa0129090 AT1G80350.1 41.196 301 155 5 928 1220 235 521 9.48e-64 226
Msa0129090 AT2G45500.4 40.614 293 153 6 929 1220 80 352 1.36e-62 218
Msa0129090 AT2G45500.3 40.614 293 153 6 929 1220 80 352 1.36e-62 218
Msa0129090 AT2G45500.2 40.614 293 153 6 929 1220 213 485 3.18e-61 218
Msa0129090 AT2G45500.1 40.614 293 153 6 929 1220 217 489 3.85e-61 218
Msa0129090 AT2G45500.5 40.614 293 153 6 929 1220 223 495 6.68e-61 218
Msa0129090 AT2G34560.1 47.619 231 116 4 929 1157 100 327 6.87e-59 208
Msa0129090 AT2G34560.2 47.619 231 116 4 929 1157 109 336 8.48e-59 208
Msa0129090 AT2G27600.1 44.344 221 114 5 929 1146 129 343 1.38e-51 189
Msa0129090 AT3G09840.1 37.667 300 176 6 929 1220 477 773 3.38e-48 186
Msa0129090 AT3G09840.1 42.241 232 128 4 929 1158 204 431 5.54e-44 173
Msa0129090 AT3G53230.1 42.213 244 133 5 929 1167 478 718 1.90e-47 184
Msa0129090 AT3G53230.1 42.241 232 128 4 929 1158 205 432 4.19e-44 173
Msa0129090 AT5G03340.1 41.525 236 131 4 929 1160 477 709 1.45e-46 181
Msa0129090 AT5G03340.1 42.241 232 128 4 929 1158 204 431 3.80e-44 173
Msa0129090 AT2G20140.1 40.260 231 129 5 930 1155 186 412 2.32e-42 162
Msa0129090 AT4G29040.1 39.827 231 130 5 930 1155 186 412 6.11e-42 160
Msa0129090 AT3G56690.1 41.772 237 130 5 929 1161 721 953 7.34e-42 167
Msa0129090 AT3G56690.1 37.688 199 116 5 965 1159 416 610 3.74e-31 133
Msa0129090 AT5G43010.1 36.364 231 138 5 929 1154 136 362 9.96e-41 155
Msa0129090 AT3G05530.1 38.865 229 131 5 931 1154 170 394 1.15e-40 156
Msa0129090 AT1G45000.1 36.245 229 141 4 929 1154 136 362 3.81e-40 154
Msa0129090 AT2G26140.1 37.591 274 147 8 882 1149 186 441 8.43e-40 159
Msa0129090 AT1G09100.1 37.991 229 133 5 931 1154 169 393 8.32e-39 150
Msa0129090 AT3G01610.1 32.353 306 192 5 928 1220 229 532 1.16e-37 153
Msa0129090 AT3G01610.1 36.207 232 140 5 929 1157 525 751 9.09e-32 134
Msa0129090 AT3G01610.2 32.353 306 192 5 928 1220 229 532 1.19e-37 153
Msa0129090 AT3G01610.2 36.207 232 140 5 929 1157 525 751 9.21e-32 134
Msa0129090 AT5G19990.2 36.638 232 137 5 930 1155 101 328 1.35e-37 145
Msa0129090 AT5G19990.1 36.638 232 137 5 930 1155 159 386 1.72e-37 147
Msa0129090 AT5G19990.3 36.638 232 137 5 930 1155 159 386 1.72e-37 147
Msa0129090 AT5G20000.1 36.638 232 137 5 930 1155 159 386 2.04e-37 147
Msa0129090 AT1G53750.1 36.364 231 138 5 929 1154 165 391 5.59e-37 145
Msa0129090 AT5G58290.1 37.229 231 138 4 929 1155 152 379 8.06e-37 144
Msa0129090 AT1G03000.1 30.086 349 225 8 873 1214 597 933 1.33e-35 147
Msa0129090 AT2G30950.1 38.767 227 129 6 928 1149 223 444 2.34e-35 145
Msa0129090 AT2G30950.2 38.767 227 129 6 928 1149 223 444 2.34e-35 145
Msa0129090 AT2G30950.3 38.767 227 129 6 928 1149 223 444 2.34e-35 145
Msa0129090 AT3G47060.1 39.474 228 127 6 929 1149 322 545 2.47e-35 145
Msa0129090 AT2G30950.4 38.767 227 129 6 928 1149 227 448 2.63e-35 145
Msa0129090 AT5G08470.3 34.855 241 147 5 929 1165 832 1066 5.80e-35 145
Msa0129090 AT5G08470.1 34.855 241 147 5 929 1165 841 1075 7.51e-35 145
Msa0129090 AT1G06430.1 38.326 227 130 6 928 1149 216 437 2.03e-34 142
Msa0129090 AT1G06430.3 38.326 227 130 6 928 1149 216 437 2.03e-34 142
Msa0129090 AT1G06430.2 38.326 227 130 6 928 1149 216 437 2.03e-34 142
Msa0129090 AT1G53780.2 34.498 229 141 5 930 1153 359 583 2.05e-34 141
Msa0129090 AT1G53780.3 34.498 229 141 5 930 1153 337 561 2.11e-34 141
Msa0129090 AT1G53780.1 34.498 229 141 5 930 1153 338 562 2.17e-34 141
Msa0129090 AT1G53780.4 34.498 229 141 5 930 1153 338 562 2.17e-34 141
Msa0129090 AT1G50250.1 37.549 253 145 8 922 1168 254 499 3.66e-34 141
Msa0129090 AT5G42270.1 36.759 253 147 8 922 1168 242 487 1.34e-33 139
Msa0129090 AT5G15250.1 37.885 227 131 6 928 1149 220 441 1.46e-33 139
Msa0129090 AT5G58870.1 37.719 228 131 6 929 1149 326 549 2.35e-33 139
Msa0129090 AT5G53170.1 36.820 239 138 7 915 1149 346 575 7.62e-33 138
Msa0129090 AT1G07510.1 36.910 233 136 6 929 1154 324 552 1.95e-32 137
Msa0129090 AT3G16290.1 36.402 239 132 6 927 1155 405 633 6.03e-32 135
Msa0129090 AT3G02450.1 36.820 239 142 6 929 1163 331 564 6.36e-32 134
Msa0129090 AT1G05910.1 36.585 246 141 7 929 1166 378 616 1.36e-31 135
Msa0129090 AT4G04180.2 29.225 284 185 7 929 1203 311 587 1.83e-30 129
Msa0129090 AT4G04180.1 29.225 284 185 7 929 1203 316 592 2.10e-30 129
Msa0129090 AT2G29080.1 36.207 232 138 6 929 1154 319 546 2.52e-30 130
Msa0129090 AT2G03670.2 32.226 301 172 6 933 1227 23 297 2.70e-30 125
Msa0129090 AT2G03670.2 39.474 114 68 1 929 1042 283 395 4.47e-15 79.7
Msa0129090 AT5G15250.2 34.127 252 133 7 926 1149 218 464 3.45e-30 127
Msa0129090 AT2G03670.1 34.914 232 143 4 929 1155 283 511 1.20e-29 126
Msa0129090 AT2G03670.1 32.226 301 172 6 933 1227 23 297 2.42e-29 125
Msa0129090 AT4G23940.1 34.855 241 139 6 928 1155 426 661 2.04e-29 127
Msa0129090 AT1G79560.3 34.649 228 131 7 939 1155 500 720 5.11e-27 119
Msa0129090 AT1G79560.2 34.649 228 131 7 939 1155 500 720 6.06e-27 119
Msa0129090 AT1G79560.1 34.649 228 131 7 939 1155 500 720 6.22e-27 119
Msa0129090 AT1G45000.2 39.286 140 80 3 929 1065 136 273 7.16e-26 110
Msa0129090 AT3G15120.2 32.159 227 142 7 931 1149 728 950 2.22e-24 112
Msa0129090 AT3G15120.1 32.159 227 142 7 931 1149 718 940 2.35e-24 112
Msa0129090 AT5G64580.1 32.800 250 146 7 928 1163 312 553 1.47e-23 108
Msa0129090 AT4G04910.1 32.512 203 113 7 965 1148 248 445 1.01e-18 92.8
Msa0129090 AT5G08470.2 32.680 153 95 4 929 1079 841 987 2.79e-18 91.7
Msa0129090 AT3G04340.1 29.442 197 120 8 923 1111 779 964 1.05e-14 80.1
Msa0129090 AT5G16930.1 33.117 154 95 4 966 1117 397 544 1.46e-13 75.9
Msa0129090 AT3G03060.1 33.766 154 94 4 966 1117 385 532 3.84e-13 74.3
Msa0129090 AT2G18330.1 31.944 144 90 4 966 1107 384 521 1.45e-12 72.4
Msa0129090 AT4G36580.1 27.358 212 116 6 966 1146 381 585 7.47e-12 70.1

Find 324 sgRNAs with CRISPR-Local

Find 1014 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAAATCTTCCATCTTTA+AGG 0.032648 1_3:+58895176 None:intergenic
CCATTATTGCACAAGCTTTC+TGG 0.082182 1_3:-58903492 Msa0129090:CDS
CATCTGTAAGCTATCCTTTA+AGG 0.090387 1_3:+58903347 None:intergenic
AGCCTTCTGTTTACAAAATT+TGG 0.139794 1_3:-58900797 Msa0129090:CDS
TTCTCCAAGATCTCCCTTAT+TGG 0.143414 1_3:+58896443 None:intergenic
CCACAGAATGTTGTAGTAAT+TGG 0.183954 1_3:-58900973 Msa0129090:CDS
TAAAATGAAGAATGAGTTTA+TGG 0.190912 1_3:-58896946 Msa0129090:CDS
CTAGATGTGGAGAAGATTAT+TGG 0.196808 1_3:-58899355 Msa0129090:intron
TATTTGCACCTTAGATAATA+TGG 0.203021 1_3:+58903279 None:intergenic
TTCAGTTTAATTTAATATTC+TGG 0.206154 1_3:-58894338 None:intergenic
AGAATGAGTTTATGGTTAAT+TGG 0.207336 1_3:-58896938 Msa0129090:CDS
TTGAGTTGCTTCATTACTTT+GGG 0.207730 1_3:+58900489 None:intergenic
ATGTGGATCCACCTATAATT+TGG 0.208109 1_3:+58902373 None:intergenic
AAGGCACTTGCAAAGCATTT+TGG 0.225785 1_3:-58902788 Msa0129090:CDS
AAGCATGACCAATTCCTTTA+AGG 0.225791 1_3:+58898779 None:intergenic
ATCTGTATTGTAACTTTGTT+TGG 0.230826 1_3:+58900456 None:intergenic
GTTATTCCACCAACTGATAT+TGG 0.238629 1_3:-58898846 Msa0129090:CDS
GCCCAAGCAACAAGCCTTAA+AGG 0.243418 1_3:-58903361 Msa0129090:CDS
GAAGTTGTCTTTGGTGTTTC+CGG 0.243873 1_3:-58904178 Msa0129090:CDS
TTGGGGTATCAACATCTTTA+AGG 0.244546 1_3:+58903397 None:intergenic
TGTTGCTGGAGCTTCATTAT+TGG 0.246217 1_3:-58903817 Msa0129090:CDS
TCTATCTGGTTCGTCATTAA+TGG 0.260881 1_3:+58903650 None:intergenic
TGTCCTTTGCAAAATAATTC+AGG 0.261823 1_3:+58898744 None:intergenic
AGATTATTCACTTTCTATAA+TGG 0.277491 1_3:+58894373 None:intergenic
TCCTTTAAGGCTTGTTGCTT+GGG 0.278495 1_3:+58903360 None:intergenic
ATCACAGGCTTTGATTCTTC+AGG 0.286755 1_3:+58899289 None:intergenic
TGTTAGAGTTTGATCTTTGA+TGG 0.305050 1_3:+58899470 None:intergenic
TAGTTTCTACGTCACGTTCT+AGG 0.306149 1_3:+58900307 None:intergenic
TTATTCCACCAACTGATATT+GGG 0.306831 1_3:-58898845 Msa0129090:CDS
GAGGGGTGCCTGCCCTATGC+TGG 0.310428 1_3:-58894646 Msa0129090:three_prime_UTR
GCAATAAATTCTACAATGAT+AGG 0.316065 1_3:+58894888 None:intergenic
ATTCAGGTGCTCAACAAGTT+TGG 0.316901 1_3:-58899522 Msa0129090:intron
CTTACGTTCTTCCAATATCT+TGG 0.317901 1_3:+58903434 None:intergenic
CCTCAGATGAATGCATAAAA+TGG 0.319488 1_3:+58899317 None:intergenic
AAATGTTAAGGACACCTTAA+AGG 0.320502 1_3:-58898793 Msa0129090:CDS
GTTCTTTCAGTCCTTGGAAT+TGG 0.321363 1_3:+58902474 None:intergenic
AAAGTTTCCCATATTATCTA+AGG 0.321609 1_3:-58903287 Msa0129090:intron
TGCCTTATCATCCCCATTGC+TGG 0.323971 1_3:+58903695 None:intergenic
TTAAAATCTTCCATCTTTAA+GGG 0.327751 1_3:+58895177 None:intergenic
CAATTGTGCAGCATTCAGTA+TGG 0.327950 1_3:-58899125 Msa0129090:intron
CATTCCTTGTGACGCAGTTT+AGG 0.330790 1_3:+58894846 None:intergenic
TGTGGTGCTGTGAAAGTTAA+TGG 0.332291 1_3:-58904247 Msa0129090:CDS
GGAGACCTGTCGTCTGTTGC+TGG 0.332943 1_3:-58903831 Msa0129090:CDS
ATGGAAAGAGTCTCAAGTTC+AGG 0.333247 1_3:+58899489 None:intergenic
GTTGAGTTGCTTCATTACTT+TGG 0.333362 1_3:+58900488 None:intergenic
CCAGAAAGCTTGTGCAATAA+TGG 0.334461 1_3:+58903492 None:intergenic
GGAAGAACGTAAGGAATTAA+AGG 0.335163 1_3:-58903424 Msa0129090:CDS
AGGTTCATCTGTTGCATTGC+TGG 0.338194 1_3:-58904284 Msa0129090:CDS
TGTAGGCTCTGAAATATATC+AGG 0.339494 1_3:-58902822 Msa0129090:intron
CTGCAGCGCACTGTCCAATA+AGG 0.340976 1_3:-58896457 Msa0129090:CDS
GGGGTCTCATTCAATGATAT+TGG 0.344937 1_3:-58898825 Msa0129090:CDS
AGTGTTGATGCCCAAATTAT+AGG 0.346504 1_3:-58902384 Msa0129090:CDS
ATCTAATTCTAAGTCAGCTT+GGG 0.347117 1_3:-58907549 Msa0129090:CDS
ATCTTGATGAGGCTGTTATT+AGG 0.349168 1_3:-58896851 Msa0129090:CDS
ACTTCTACAGCAACAACATT+TGG 0.350121 1_3:+58903573 None:intergenic
TTCATACAAACTTACCTTGA+AGG 0.355496 1_3:+58902089 None:intergenic
GTGGATTCTCTTTCACCTCC+TGG 0.355796 1_3:-58902749 Msa0129090:CDS
ATAGATGTTCTTTCAGTCCT+TGG 0.357740 1_3:+58902468 None:intergenic
ATCCTTTAAGGCTTGTTGCT+TGG 0.358220 1_3:+58903359 None:intergenic
TCTTAGCAAATATGAGATAT+AGG 0.360043 1_3:-58894720 Msa0129090:three_prime_UTR
GCCCAGGGTGCTTCAATAAC+TGG 0.361825 1_3:-58903876 Msa0129090:CDS
TGGCAACATTGCCAAGATAT+TGG 0.363175 1_3:-58903445 Msa0129090:CDS
ACCTTCTCTTTACGATTGTC+CGG 0.363587 1_3:+58900937 None:intergenic
TAAGGACACCTTAAAGGAAT+TGG 0.369223 1_3:-58898787 Msa0129090:CDS
TGGCAGGTTGATAGTATGTT+GGG 0.371515 1_3:-58897005 Msa0129090:intron
AATCATTTGGTACTGGTAGA+TGG 0.376647 1_3:-58901245 Msa0129090:CDS
TTGCCACTCAAATCAAATTC+AGG 0.378643 1_3:+58903462 None:intergenic
AGGAGAAGAGAGAGGACGTT+TGG 0.379522 1_3:+58908068 None:intergenic
TCACCGTTGGTCAACGAATC+TGG 0.380371 1_3:-58907875 Msa0129090:CDS
AAGTTGTCTTTGGTGTTTCC+GGG 0.382490 1_3:-58904177 Msa0129090:CDS
AGCACCCTGGGCTTCTAAAA+TGG 0.383102 1_3:+58903887 None:intergenic
CACAACCTTTAGGTCACTTC+CGG 0.383773 1_3:+58896586 None:intergenic
GAGGAAACTCTACCTCTATA+TGG 0.389268 1_3:+58904557 None:intergenic
CTCCAATGGAATGACCTCTA+TGG 0.389872 1_3:-58894958 Msa0129090:CDS
GTAGAATCAACTTCCTTCAA+TGG 0.391373 1_3:+58902507 None:intergenic
GTTGCATTGCTGGAAATCAT+AGG 0.391606 1_3:-58904274 Msa0129090:CDS
GGCAGGCACCCCTCAATGAC+AGG 0.395207 1_3:+58894655 None:intergenic
CTTTGGTGTTTCCGGGAAGC+AGG 0.396949 1_3:-58904170 Msa0129090:CDS
ATGAGGCTTTACTTTCTGAT+TGG 0.397144 1_3:-58900338 Msa0129090:CDS
AATGTCGTCAATGTAATTTA+TGG 0.397217 1_3:-58904621 Msa0129090:CDS
CGCATAGCCTCGTGCTCACC+AGG 0.399699 1_3:+58896969 None:intergenic
GATATAGAGAAGGGTGTGGC+TGG 0.400694 1_3:-58901033 Msa0129090:CDS
GTGTCTCCTCCTCAGTGTAT+AGG 0.404471 1_3:-58907758 Msa0129090:intron
AAGGGAAGAGTTGGATCAGC+AGG 0.406798 1_3:+58894683 None:intergenic
AACATTTGGATCTTCATTAA+CGG 0.409088 1_3:+58903587 None:intergenic
TCCAAACGAAGATGAAGCTT+TGG 0.410208 1_3:-58907780 Msa0129090:CDS
TGTGGATCCACCTATAATTT+GGG 0.412098 1_3:+58902374 None:intergenic
TCTGTATTGTAACTTTGTTT+GGG 0.412866 1_3:+58900457 None:intergenic
GAATGAGTTTATGGTTAATT+GGG 0.413193 1_3:-58896937 Msa0129090:CDS
TTTGTCTGCAGCCAATCATT+TGG 0.414264 1_3:-58901258 Msa0129090:intron
ACCAAAGCTTCATCTTCGTT+TGG 0.414472 1_3:+58907779 None:intergenic
CATCACTACCTGCCAGCAAT+GGG 0.417101 1_3:-58903707 Msa0129090:CDS
TGCTATTAATGAAATCTTTG+AGG 0.419404 1_3:-58901195 Msa0129090:intron
GGGACCAAGTTATGGCTGCC+GGG 0.422070 1_3:-58901506 Msa0129090:CDS
AATCTAATTCTAAGTCAGCT+TGG 0.423340 1_3:-58907550 Msa0129090:CDS
GGATACATAAGCCTGCTTCC+CGG 0.424494 1_3:+58904159 None:intergenic
TGGAGCTTTAGAAAATGTTA+AGG 0.425250 1_3:-58898805 Msa0129090:CDS
TCCCCACGGATATTGTTATC+TGG 0.425700 1_3:-58902953 Msa0129090:CDS
TACATCATTTGCAGGTGATC+GGG 0.427726 1_3:-58902162 Msa0129090:intron
CATTGTAGAATTTATTGCTT+AGG 0.428689 1_3:-58894883 Msa0129090:three_prime_UTR
ACCATCTGATCTGTCAGAAA+TGG 0.429158 1_3:-58907837 Msa0129090:CDS
CATTTGAAGTGCAATGGCTC+TGG 0.431023 1_3:-58903004 Msa0129090:CDS
CCTATGGTAATATACAATAA+AGG 0.433810 1_3:+58894801 None:intergenic
GGAGGTGATGAAGTTGTCTT+TGG 0.434036 1_3:-58904187 Msa0129090:CDS
TTGTTCTTGCTGCCACGAAC+AGG 0.435916 1_3:-58896881 Msa0129090:CDS
GTATGGGTTTAACATTCTAC+AGG 0.438580 1_3:-58899108 Msa0129090:CDS
ATTCCAGATGGAAATGATCT+TGG 0.439599 1_3:-58901418 Msa0129090:CDS
GGTCACAGGAGAAGGTATAT+TGG 0.441217 1_3:+58903908 None:intergenic
ACTTTACGAGGCTACATGAT+AGG 0.441619 1_3:-58900524 Msa0129090:CDS
CTGTCCAATAAGGGAGATCT+TGG 0.447558 1_3:-58896447 Msa0129090:CDS
AAACAGAAGGCTGCCAGGTT+GGG 0.449432 1_3:+58900808 None:intergenic
CGGAAAATACATGCAGGGGA+GGG 0.451332 1_3:+58894455 None:intergenic
TACTGGTAGATGGTTGTGGA+GGG 0.454538 1_3:-58901235 Msa0129090:CDS
ACGCAACTTGATGCAAGATC+TGG 0.456954 1_3:-58903852 Msa0129090:CDS
TGGGCGATGTCAATAGTGTT+GGG 0.457218 1_3:+58903379 None:intergenic
GAGTTTGAAGGAGATGATGA+AGG 0.458380 1_3:+58908048 None:intergenic
ATTTGCACCTTAGATAATAT+GGG 0.459182 1_3:+58903280 None:intergenic
TTGCCCCGGCAGCCATAACT+TGG 0.461201 1_3:+58901502 None:intergenic
CCTTTATTGTATATTACCAT+AGG 0.461866 1_3:-58894801 Msa0129090:three_prime_UTR
AAGTAATGAAGCAACTCAAC+AGG 0.461980 1_3:-58900485 Msa0129090:CDS
CAATAATGGTCTCAATTTGC+AGG 0.464240 1_3:+58903506 None:intergenic
TGCCAGCAATGGGGATGATA+AGG 0.467937 1_3:-58903697 Msa0129090:CDS
ACATAACATGTTTACCTTCG+CGG 0.471242 1_3:+58896822 None:intergenic
AAGGCGGTAGCAACTGAAGC+TGG 0.471387 1_3:-58898525 Msa0129090:CDS
TCTAGTTTCAACCATGATGA+TGG 0.471514 1_3:+58908107 None:intergenic
TTACATCATTTGCAGGTGAT+CGG 0.472566 1_3:-58902163 Msa0129090:intron
GAAGATAGAAAGATGATGGT+AGG 0.474523 1_3:+58894759 None:intergenic
GCCTCTAGTCTGAGTAAAAG+TGG 0.475923 1_3:-58901078 Msa0129090:CDS
GTCATTCCATTGGAGTAGTT+CGG 0.476821 1_3:+58894966 None:intergenic
GGAAAATACATGCAGGGGAG+GGG 0.479811 1_3:+58894456 None:intergenic
AAGATAGAAAGATGATGGTA+GGG 0.480378 1_3:+58894760 None:intergenic
GCTGAGAACAAGCCTTTACC+TGG 0.480563 1_3:-58895225 Msa0129090:CDS
ATCTACCAGTACCAAATGAT+TGG 0.481031 1_3:+58901247 None:intergenic
ATCTTCATTAACGGTGGTAG+AGG 0.482174 1_3:+58903596 None:intergenic
TCCAGTTATTGAAGCACCCT+GGG 0.482949 1_3:+58903875 None:intergenic
GGCAGAAGATAGAAAGATGA+TGG 0.484540 1_3:+58894755 None:intergenic
CTCCATAGAGGTCATTCCAT+TGG 0.485285 1_3:+58894956 None:intergenic
GGGGACCAAGTTATGGCTGC+CGG 0.487323 1_3:-58901507 Msa0129090:CDS
TTCCAGTTATTGAAGCACCC+TGG 0.490670 1_3:+58903874 None:intergenic
TCTAAAATGGTCACAGGAGA+AGG 0.491145 1_3:+58903900 None:intergenic
AGGGGTGCCTGCCCTATGCT+GGG 0.492427 1_3:-58894645 Msa0129090:three_prime_UTR
AATAAAGGAAGGGCCGATGA+TGG 0.494197 1_3:+58894816 None:intergenic
CTTCTGTTTACAAAATTTGG+AGG 0.495032 1_3:-58900794 Msa0129090:CDS
TGCAGCGCACTGTCCAATAA+GGG 0.495974 1_3:-58896456 Msa0129090:CDS
CCAGATGGAAATGATCTTGG+AGG 0.498269 1_3:-58901415 Msa0129090:CDS
TTGAGCAGGGGACCAAGTTA+TGG 0.499326 1_3:-58901514 Msa0129090:intron
TTGCAAAGGACAACTAACTA+AGG 0.500266 1_3:-58898733 Msa0129090:intron
GTTTCAACCATGATGATGGA+TGG 0.500807 1_3:+58908111 None:intergenic
GTGGCAGGTTGATAGTATGT+TGG 0.501167 1_3:-58897006 Msa0129090:intron
TAAACAGAAGGCTGCCAGGT+TGG 0.501360 1_3:+58900807 None:intergenic
ACAGCCTCATCAAGATCAAA+AGG 0.502213 1_3:+58896858 None:intergenic
TTTGTAAACAGAAGGCTGCC+AGG 0.505631 1_3:+58900803 None:intergenic
TGGTCATGCTTCCTCTTCAA+AGG 0.505751 1_3:-58898767 Msa0129090:CDS
AGGTGTTACCTCCGTTAGCT+CGG 0.508029 1_3:-58907592 Msa0129090:CDS
GTGCAAATTGAGCCATATAG+AGG 0.509938 1_3:-58904569 Msa0129090:intron
TTGGGCGATGTCAATAGTGT+TGG 0.511370 1_3:+58903378 None:intergenic
ATAAATTACATTGACGACAT+TGG 0.511735 1_3:+58904623 None:intergenic
ATTTCTACGGCATCATCAAA+AGG 0.511918 1_3:-58902321 Msa0129090:CDS
CAAGATATTGGAAGAACGTA+AGG 0.511980 1_3:-58903433 Msa0129090:CDS
GGTGCTCAACAAGTTTGGAC+TGG 0.512177 1_3:-58899517 Msa0129090:CDS
TGCAGCCAATCATTTGGTAC+TGG 0.512480 1_3:-58901252 Msa0129090:intron
CTCAAAGAATGTTTCATCCA+AGG 0.514064 1_3:-58907906 Msa0129090:CDS
CATTGGCCAACAGTGTAGAT+AGG 0.515955 1_3:+58904640 None:intergenic
TGGAGCGTGGCTACTAATTG+TGG 0.516394 1_3:-58902768 Msa0129090:CDS
GATCTTGGAGAAGGAAAAGA+AGG 0.516560 1_3:-58896432 Msa0129090:intron
ACTGGTAGATGGTTGTGGAG+GGG 0.517417 1_3:-58901234 Msa0129090:CDS
TTATCATCCCCATTGCTGGC+AGG 0.517463 1_3:+58903699 None:intergenic
TACATTCATTTGAAGTGCAA+TGG 0.517785 1_3:-58903010 Msa0129090:CDS
AATGCTTCTAAATTAACATC+AGG 0.518572 1_3:+58896632 None:intergenic
TCATCACTACCTGCCAGCAA+TGG 0.521375 1_3:-58903708 Msa0129090:CDS
GGTTGTGGAGGGGATGACTC+TGG 0.521742 1_3:-58901224 Msa0129090:CDS
TTGTTGCAGTGGTTTGGTGA+AGG 0.522165 1_3:-58898377 Msa0129090:intron
GAGTTTATGGTTAATTGGGA+TGG 0.522278 1_3:-58896933 Msa0129090:CDS
TCCATACGGAAAATACATGC+AGG 0.523526 1_3:+58894449 None:intergenic
AGATAGGATCGCACATGGGC+AGG 0.523794 1_3:+58904656 None:intergenic
CAAGTCATCAACCACAGTTA+TGG 0.524233 1_3:+58894416 None:intergenic
GTTAGAAGCAGGTGAAATCA+TGG 0.524709 1_3:+58903764 None:intergenic
GGCTCTGCGAAGATGACCGT+GGG 0.525867 1_3:-58901393 Msa0129090:CDS
AGAAAATCCCAGCATAGGGC+AGG 0.526519 1_3:+58894638 None:intergenic
TTTCAACCATGATGATGGAT+GGG 0.527199 1_3:+58908112 None:intergenic
TTGGTACTGGTAGATGGTTG+TGG 0.527288 1_3:-58901239 Msa0129090:CDS
TTCTTGCTAGTGTTAGAAGC+AGG 0.527488 1_3:+58903753 None:intergenic
CTGTCAGAAATGGCTGTTGA+TGG 0.527659 1_3:-58907827 Msa0129090:CDS
TGCGATCCTATCTACACTGT+TGG 0.528033 1_3:-58904646 Msa0129090:CDS
GAGAGGACGTTTGGAAGAAG+AGG 0.528081 1_3:+58908077 None:intergenic
TGGGCATCAACACTAGAAGC+TGG 0.530453 1_3:+58902393 None:intergenic
CAACGTTGTCAGCATTCGCT+TGG 0.533139 1_3:-58900271 Msa0129090:intron
ATGTGGAGAAGATTATTGGC+TGG 0.533396 1_3:-58899351 Msa0129090:CDS
CCTTCTCTTTACGATTGTCC+GGG 0.535959 1_3:+58900938 None:intergenic
CCTCCAAGATCATTTCCATC+TGG 0.536452 1_3:+58901415 None:intergenic
TATCTTTAATCAACAACACT+AGG 0.537312 1_3:+58901052 None:intergenic
AGATAGAAAGATGATGGTAG+GGG 0.537494 1_3:+58894761 None:intergenic
TTGATTAAAGATATAGAGAA+GGG 0.539386 1_3:-58901042 Msa0129090:CDS
CATGTCTAGCATTACTTCGA+AGG 0.539965 1_3:-58898481 Msa0129090:intron
ATACTGATTTATTATTTACA+AGG 0.540172 1_3:+58894615 None:intergenic
TCAGGAGAGAACCTCTGCAT+TGG 0.540828 1_3:-58895247 Msa0129090:intron
TGAGTTGCTTCATTACTTTG+GGG 0.541759 1_3:+58900490 None:intergenic
CGTTTCTTCGACCGAGCTAA+CGG 0.543662 1_3:+58907581 None:intergenic
TTGATCCACCTTCTCCATAG+AGG 0.543836 1_3:+58894944 None:intergenic
AATTGTGCAGCATTCAGTAT+GGG 0.544177 1_3:-58899124 Msa0129090:intron
AACTTCCGTCGCTGTCCCCA+CGG 0.544191 1_3:-58902967 Msa0129090:CDS
CAAGGAGAAAATCCCAGCAT+AGG 0.545830 1_3:+58894633 None:intergenic
ACCTCCACTTAAAATATGAC+GGG 0.546727 1_3:+58904204 None:intergenic
CACCTCCACTTAAAATATGA+CGG 0.548270 1_3:+58904203 None:intergenic
GCATTAGCAAATATGACTGA+TGG 0.548831 1_3:-58896614 Msa0129090:CDS
CTGCTACAGAGTCCAGGTAA+AGG 0.549013 1_3:+58895213 None:intergenic
TGGTAATATACAATAAAGGA+AGG 0.552050 1_3:+58894805 None:intergenic
TGTGGAGAAGATTATTGGCT+GGG 0.552790 1_3:-58899350 Msa0129090:CDS
TTGATGAGGCTGTTATTAGG+AGG 0.553766 1_3:-58896848 Msa0129090:CDS
ATATGACCGAACTACTCCAA+TGG 0.554821 1_3:-58894972 Msa0129090:CDS
CATCTTTAAGGGACGAATGT+CGG 0.555800 1_3:+58895188 None:intergenic
TCAATGTAATTTATGGCTGA+AGG 0.556440 1_3:-58904614 Msa0129090:CDS
TCTAATTCTAAGTCAGCTTG+GGG 0.557160 1_3:-58907548 Msa0129090:CDS
CACAAAACATTACTAACAGA+GGG 0.557214 1_3:+58904589 None:intergenic
AAGGAGAAAATCCCAGCATA+GGG 0.557812 1_3:+58894634 None:intergenic
CTAAAGAAATTCCAATTCCA+AGG 0.558136 1_3:-58902485 Msa0129090:CDS
CAAGGTTAATCCTTCACCGT+TGG 0.558411 1_3:-58907888 Msa0129090:CDS
TTTGAGAAATCAATTCCAGA+TGG 0.558570 1_3:-58901430 Msa0129090:CDS
GCAGGCACCCCTCAATGACA+GGG 0.558902 1_3:+58894656 None:intergenic
CGACATTCGTCCCTTAAAGA+TGG 0.560405 1_3:-58895187 Msa0129090:CDS
TTGCATTGCTGGAAATCATA+GGG 0.560439 1_3:-58904273 Msa0129090:CDS
ACGGAAAATACATGCAGGGG+AGG 0.560604 1_3:+58894454 None:intergenic
CCAATTACTACAACATTCTG+TGG 0.561237 1_3:+58900973 None:intergenic
ATATTGTTATCTGGTCCTGC+AGG 0.562546 1_3:-58902944 Msa0129090:intron
GTACTGGTAGATGGTTGTGG+AGG 0.563542 1_3:-58901236 Msa0129090:CDS
AAGCAAGGAGAACTTTGCCC+CGG 0.564745 1_3:+58901488 None:intergenic
CTTCGAAGTAATGCTAGACA+TGG 0.564838 1_3:+58898482 None:intergenic
GCTTATTTCTCAATCTTCTG+AGG 0.564893 1_3:-58907522 Msa0129090:intron
TGTGGTGATGAGGCAGCAGA+AGG 0.565940 1_3:+58902119 None:intergenic
TGGATCCACATCTAGTTCAC+AGG 0.566343 1_3:-58902361 Msa0129090:CDS
CTGGTGTGGATGCAGATGTT+GGG 0.567293 1_3:-58903545 Msa0129090:CDS
GCTGGTGTGGATGCAGATGT+TGG 0.569948 1_3:-58903546 Msa0129090:CDS
GCCATTTCTGACAGATCAGA+TGG 0.570778 1_3:+58907836 None:intergenic
AAGCTCCAGCAACAGACGAC+AGG 0.571971 1_3:+58903826 None:intergenic
AGCAGCCGGAGTACTTCTCT+TGG 0.573151 1_3:+58902440 None:intergenic
ATAATATGGGAAACTTTCAA+AGG 0.575105 1_3:+58903293 None:intergenic
AATAATTCAGGCCTTTGAAG+AGG 0.575146 1_3:+58898756 None:intergenic
GTTGATTAAAGATATAGAGA+AGG 0.575175 1_3:-58901043 Msa0129090:CDS
GGAATGTGAAATTCCATCAT+CGG 0.576944 1_3:-58894829 Msa0129090:three_prime_UTR
GGTGATCGGGTAAAATATGT+TGG 0.577601 1_3:-58902149 Msa0129090:CDS
AAGATCAAAAGGCCTGTTCG+TGG 0.578120 1_3:+58896869 None:intergenic
AAAAGCAATATTCCCTTGCA+AGG 0.581231 1_3:+58898582 None:intergenic
TTGGGGAGACGTGAAAATCC+TGG 0.581561 1_3:-58896987 Msa0129090:CDS
TTATACTTCCAGACCCAACC+TGG 0.585606 1_3:-58900821 Msa0129090:intron
TCGGCACTGCTACAGAGTCC+AGG 0.586373 1_3:+58895207 None:intergenic
GAGTTGCTTCATTACTTTGG+GGG 0.586847 1_3:+58900491 None:intergenic
TGTCCTGAATTTGATTTGAG+TGG 0.587920 1_3:-58903465 Msa0129090:CDS
TGGAAAGAGTCTCAAGTTCA+GGG 0.588098 1_3:+58899490 None:intergenic
TGTATATGTATTGTAGCAGC+CGG 0.588131 1_3:+58902426 None:intergenic
ATACTCCGGAAGTGACCTAA+AGG 0.588550 1_3:-58896591 Msa0129090:intron
TCAAAACCCATCCATCATCA+TGG 0.590266 1_3:-58908118 Msa0129090:exon
CAACGGTGAAGGATTAACCT+TGG 0.591714 1_3:+58907889 None:intergenic
AGTTACAATACAGATGCCTC+AGG 0.592323 1_3:-58900448 Msa0129090:intron
TCTCTTTACGATTGTCCGGG+TGG 0.592849 1_3:+58900941 None:intergenic
TATTCCACCAACTGATATTG+GGG 0.594319 1_3:-58898844 Msa0129090:CDS
GATTCGTTGACCAACGGTGA+AGG 0.594433 1_3:+58907878 None:intergenic
CCATACGGAAAATACATGCA+GGG 0.594675 1_3:+58894450 None:intergenic
TGGAATGACCTCTATGGAGA+AGG 0.595440 1_3:-58894952 Msa0129090:CDS
TCAAATTGCTGAGAAATCAA+AGG 0.595701 1_3:-58907612 Msa0129090:CDS
GATGATGAAGGAGAAGAGAG+AGG 0.595870 1_3:+58908060 None:intergenic
ATCTTTAATCAACAACACTA+GGG 0.596331 1_3:+58901053 None:intergenic
AATAAGGGAGATCTTGGAGA+AGG 0.596378 1_3:-58896441 Msa0129090:CDS
GATAGAAAGATGATGGTAGG+GGG 0.596570 1_3:+58894762 None:intergenic
GCACAAAACATTACTAACAG+AGG 0.596693 1_3:+58904588 None:intergenic
GAGACCCCAATATCAGTTGG+TGG 0.597341 1_3:+58898840 None:intergenic
GGATCGCACATGGGCAGGTG+AGG 0.600216 1_3:+58904661 None:intergenic
TCACCAGATTCGTTGACCAA+CGG 0.601470 1_3:+58907872 None:intergenic
TACAGCCTGTGAACTAGATG+TGG 0.602414 1_3:+58902356 None:intergenic
GGGCTCTGCGAAGATGACCG+TGG 0.602812 1_3:-58901394 Msa0129090:CDS
AATATGACTGATGGATACTC+CGG 0.603542 1_3:-58896605 Msa0129090:CDS
AACCTCTCTGCAGATATCAC+AGG 0.603562 1_3:+58899274 None:intergenic
ATATAGAGAAGGGTGTGGCT+GGG 0.603568 1_3:-58901032 Msa0129090:CDS
ACTGAAGCAAGAAATTTCTA+CGG 0.603821 1_3:-58902334 Msa0129090:CDS
TTATTAGGAGGCTTCCGCGA+AGG 0.604179 1_3:-58896836 Msa0129090:intron
TGGGCTTCTAAAATGGTCAC+AGG 0.606530 1_3:+58903894 None:intergenic
GAATTTGAGAAGAAACTGCT+TGG 0.607693 1_3:-58898873 Msa0129090:CDS
ATATCAGGAGACTCTGTCAA+AGG 0.608833 1_3:-58902807 Msa0129090:CDS
GACCAGATAACAATATCCGT+GGG 0.611796 1_3:+58902951 None:intergenic
TCATTAACGGTGGTAGAGGA+CGG 0.612113 1_3:+58903600 None:intergenic
CAGATGGAAATGATCTTGGA+GGG 0.612382 1_3:-58901414 Msa0129090:CDS
CAGGCACCCCTCAATGACAG+GGG 0.612742 1_3:+58894657 None:intergenic
AATGAGACCCCAATATCAGT+TGG 0.614901 1_3:+58898837 None:intergenic
ATCGCCTAAACTGCGTCACA+AGG 0.615327 1_3:-58894850 Msa0129090:three_prime_UTR
GTTGCTGTAGAAGTCAATGC+TGG 0.616908 1_3:-58903564 Msa0129090:CDS
TAAAGATATAGAGAAGGGTG+TGG 0.618571 1_3:-58901037 Msa0129090:CDS
GGACCAAGTTATGGCTGCCG+GGG 0.619591 1_3:-58901505 Msa0129090:CDS
AATGACCTCTATGGAGAAGG+TGG 0.620214 1_3:-58894949 Msa0129090:CDS
GGACCAGATAACAATATCCG+TGG 0.620245 1_3:+58902950 None:intergenic
CCCGGACAATCGTAAAGAGA+AGG 0.621040 1_3:-58900938 Msa0129090:intron
AATATCCGTGGGGACAGCGA+CGG 0.621128 1_3:+58902962 None:intergenic
AAGTTAATGGAAAGATGTGT+GGG 0.624767 1_3:-58904234 Msa0129090:CDS
GGGCGATGTCAATAGTGTTG+GGG 0.625948 1_3:+58903380 None:intergenic
TTCTTCGACCGAGCTAACGG+AGG 0.627508 1_3:+58907584 None:intergenic
GTTGATGCCCAAATTATAGG+TGG 0.628751 1_3:-58902381 Msa0129090:CDS
AAAGTTAATGGAAAGATGTG+TGG 0.629427 1_3:-58904235 Msa0129090:CDS
GGTGTGTGCAAGTGTGTCAT+CGG 0.630593 1_3:-58895004 Msa0129090:CDS
TACCAGAACAAAAGAACCCA+CGG 0.633473 1_3:+58901377 None:intergenic
GGTAATATACAATAAAGGAA+GGG 0.634671 1_3:+58894806 None:intergenic
CAAGCGAATGCTGACAACGT+TGG 0.636010 1_3:+58900272 None:intergenic
TTGATACCTATACACTGAGG+AGG 0.637134 1_3:+58907752 None:intergenic
CTTGTTCTCAGCCAATGCAG+AGG 0.640074 1_3:+58895236 None:intergenic
TGAAAATCCTGGTGAGCACG+AGG 0.644939 1_3:-58896976 Msa0129090:CDS
CTGGAAATCATAGGGAGTTG+TGG 0.645621 1_3:-58904265 Msa0129090:CDS
GTTTACCAAGAGAAGTACTC+CGG 0.646811 1_3:-58902445 Msa0129090:CDS
AGTGTAGATAGGATCGCACA+TGG 0.649928 1_3:+58904651 None:intergenic
GGCAGGTTGATAGTATGTTG+GGG 0.654910 1_3:-58897004 Msa0129090:intron
ATTTGGATCTTCATTAACGG+TGG 0.657754 1_3:+58903590 None:intergenic
AGGCACCCCTCAATGACAGG+GGG 0.661575 1_3:+58894658 None:intergenic
AGGGAAGAGTTGGATCAGCA+GGG 0.664810 1_3:+58894684 None:intergenic
TATGGGTTTAACATTCTACA+GGG 0.665369 1_3:-58899107 Msa0129090:CDS
GTGGTGATGAGGCAGCAGAA+GGG 0.666844 1_3:+58902120 None:intergenic
CATACGGAAAATACATGCAG+GGG 0.668763 1_3:+58894451 None:intergenic
TGTAATTCTGCACAGCATGG+AGG 0.682821 1_3:-58904304 Msa0129090:intron
TTGTTTAGGATAACTTTACG+AGG 0.684403 1_3:-58900536 Msa0129090:intron
CTTAGAAAACATACACCAGG+AGG 0.693749 1_3:+58902734 None:intergenic
GTGTAGATAGGATCGCACAT+GGG 0.698109 1_3:+58904652 None:intergenic
ATCACTACCTGCCAGCAATG+GGG 0.702885 1_3:-58903706 Msa0129090:CDS
CTAATTCTAAGTCAGCTTGG+GGG 0.703976 1_3:-58907547 Msa0129090:CDS
AATTGGTTCACATATCCACC+CGG 0.708734 1_3:-58900956 Msa0129090:CDS
AAAATCAGACACCATAACTG+TGG 0.717111 1_3:-58894427 Msa0129090:three_prime_UTR
AGCCTGTGATATCTGCAGAG+AGG 0.737849 1_3:-58899276 Msa0129090:intron
TGTAGAAGTCAATGCTGGTG+TGG 0.750767 1_3:-58903559 Msa0129090:CDS
ACCAGATAACAATATCCGTG+GGG 0.753414 1_3:+58902952 None:intergenic
ACTTTGATACCTATACACTG+AGG 0.795812 1_3:+58907749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTA+TGG - chr1_3:58901938-58901957 Msa0129090:intron 0.0%
!! AAAAAAAAAAAAAAAAAATA+GGG + chr1_3:58905800-58905819 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAT+AGG + chr1_3:58905801-58905820 None:intergenic 0.0%
!!! ATTTATATATTTTCTGAATT+CGG - chr1_3:58895192-58895211 Msa0129090:CDS 10.0%
!!! GAAATACAATATTTTATTTA+AGG - chr1_3:58896826-58896845 Msa0129090:intron 10.0%
!!! AATACAATATTTTATTTAAG+GGG - chr1_3:58896828-58896847 Msa0129090:intron 10.0%
!! TTATTAAATAATCAATTGTA+TGG - chr1_3:58896955-58896974 Msa0129090:CDS 10.0%
!!! TTTTAAGTTTAAAAAGATAA+AGG + chr1_3:58898006-58898025 None:intergenic 10.0%
!!! AATGAATTTTATTTCTTTTA+TGG - chr1_3:58898129-58898148 Msa0129090:intron 10.0%
!!! CATTTTTTTATTTTCTATTT+TGG - chr1_3:58900866-58900885 Msa0129090:intron 10.0%
!!! TGTTTTATTATTTATATGTT+AGG - chr1_3:58901626-58901645 Msa0129090:intron 10.0%
!!! TTCCATTTTTTTTTTTTTTA+TGG - chr1_3:58902524-58902543 Msa0129090:intron 10.0%
!!! TATTTTCTATATAAAAAACT+AGG + chr1_3:58907952-58907971 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGATGA+TGG - chr1_3:58907982-58908001 Msa0129090:intron 10.0%
!!! TTTATATATTTTCTGAATTC+GGG - chr1_3:58895193-58895212 Msa0129090:CDS 15.0%
!! TAATCTATTAAACTTAGAAA+AGG + chr1_3:58898199-58898218 None:intergenic 15.0%
!! TAAAAGATAATTTATTCTAC+TGG - chr1_3:58899447-58899466 Msa0129090:intron 15.0%
!! GAAACGAATTATATAAAATT+AGG + chr1_3:58899886-58899905 None:intergenic 15.0%
!!! TTTTATTTATATGCATTTTC+AGG + chr1_3:58900733-58900752 None:intergenic 15.0%
!! ATAAATAAAAATTCTTGCTT+TGG - chr1_3:58900743-58900762 Msa0129090:intron 15.0%
!!! TTTTTTATTTTCTATTTTGG+TGG - chr1_3:58900869-58900888 Msa0129090:intron 15.0%
!! CAAAAAATAAACTAATCTAA+AGG + chr1_3:58900963-58900982 None:intergenic 15.0%
!! AATATCTATGATTATTATAC+CGG + chr1_3:58901801-58901820 None:intergenic 15.0%
!! CAAGAAAAAAAAAAATTATC+AGG + chr1_3:58902310-58902329 None:intergenic 15.0%
!! AGCCATAAAAAAAAAAAAAA+TGG + chr1_3:58902529-58902548 None:intergenic 15.0%
!!! GTTTTTACTATTTAATTGTT+TGG - chr1_3:58903102-58903121 Msa0129090:intron 15.0%
!!! CTAATTGTTTTTTATTTTTG+TGG - chr1_3:58905504-58905523 Msa0129090:intron 15.0%
!!! TTTTTTTTTTTGTAGATTGA+TGG - chr1_3:58905815-58905834 Msa0129090:intron 15.0%
!! AAAAATTACTCAAAAGAATT+AGG + chr1_3:58906363-58906382 None:intergenic 15.0%
!!! TATCTTACTTTTTAAGATAA+GGG + chr1_3:58906786-58906805 None:intergenic 15.0%
!!! ATATCTTACTTTTTAAGATA+AGG + chr1_3:58906787-58906806 None:intergenic 15.0%
!!! TTATTTAATTTTACTGTTGA+AGG - chr1_3:58907126-58907145 Msa0129090:intron 15.0%
!!! AAACATTTGCTATATTAAAA+GGG + chr1_3:58907169-58907188 None:intergenic 15.0%
!!! TAAACATTTGCTATATTAAA+AGG + chr1_3:58907170-58907189 None:intergenic 15.0%
!!! TATTTGCTAAGAATTTTTTT+CGG + chr1_3:58907810-58907829 None:intergenic 15.0%
!!! ATACTGATTTATTATTTACA+AGG + chr1_3:58907926-58907945 None:intergenic 15.0%
!! AAAAATTATTGAAACGAAAC+TGG + chr1_3:58894346-58894365 None:intergenic 20.0%
!!! AGTTTCGTTTCAATAATTTT+TGG - chr1_3:58894345-58894364 Msa0129090:three_prime_UTR 20.0%
!!! ACTTTTTATCATTTCTTTCA+TGG - chr1_3:58894817-58894836 Msa0129090:three_prime_UTR 20.0%
!!! CTTTTTATCATTTCTTTCAT+GGG - chr1_3:58894818-58894837 Msa0129090:three_prime_UTR 20.0%
!!! TTTCTTTGTCTTATTAAAGT+GGG - chr1_3:58895091-58895110 Msa0129090:intron 20.0%
!!! TTATATATTTTCTGAATTCG+GGG - chr1_3:58895194-58895213 Msa0129090:CDS 20.0%
!!! AGTGTATAACTTGTATATTA+TGG - chr1_3:58895303-58895322 Msa0129090:intron 20.0%
!! AATAGACTAGATATGTTAAT+TGG + chr1_3:58895511-58895530 None:intergenic 20.0%
!!! TACACTTATTCATTTTAGTA+GGG + chr1_3:58895661-58895680 None:intergenic 20.0%
!!! TTACACTTATTCATTTTAGT+AGG + chr1_3:58895662-58895681 None:intergenic 20.0%
!! TGCAAATACAATAATTAGAA+GGG + chr1_3:58895887-58895906 None:intergenic 20.0%
!! TTGCAAATACAATAATTAGA+AGG + chr1_3:58895888-58895907 None:intergenic 20.0%
!! ATCTTCATAGTTAACAAATA+AGG - chr1_3:58896995-58897014 Msa0129090:CDS 20.0%
!!! ATTTATAATGCGCTTTTTTA+GGG + chr1_3:58897122-58897141 None:intergenic 20.0%
!!! TATTTATAATGCGCTTTTTT+AGG + chr1_3:58897123-58897142 None:intergenic 20.0%
!! TTCATTAAGTTTAGAAAAAG+AGG - chr1_3:58897559-58897578 Msa0129090:intron 20.0%
!! TAAGTTTAAAAAGATAAAGG+AGG + chr1_3:58898003-58898022 None:intergenic 20.0%
!!! TAACAGTAATTTTCTTATGA+TGG + chr1_3:58898175-58898194 None:intergenic 20.0%
!! AAAAAGATAAATTCTTGCTA+GGG + chr1_3:58898418-58898437 None:intergenic 20.0%
!! ATTTAAGAATGAAAAAACAC+AGG + chr1_3:58898534-58898553 None:intergenic 20.0%
!! AATTATACATATCTATTGTG+TGG - chr1_3:58899339-58899358 Msa0129090:CDS 20.0%
!!! TTTTCTTTTTTCCATAAGTT+AGG - chr1_3:58899667-58899686 Msa0129090:intron 20.0%
!!! ATTGTATATGATTCTTTTGT+AGG - chr1_3:58899699-58899718 Msa0129090:intron 20.0%
!! ATATAAAATTAGGCTAGTAT+GGG + chr1_3:58899876-58899895 None:intergenic 20.0%
!! TATATAAAATTAGGCTAGTA+TGG + chr1_3:58899877-58899896 None:intergenic 20.0%
!! TAGAAACTAAATTTCAAACT+AGG + chr1_3:58900290-58900309 None:intergenic 20.0%
!! TGTAAGAATCATATTATTGA+AGG + chr1_3:58900360-58900379 None:intergenic 20.0%
!! AAACTAATCTAAAGGTAAAA+AGG + chr1_3:58900955-58900974 None:intergenic 20.0%
!! TTGATTAAAGATATAGAGAA+GGG - chr1_3:58901496-58901515 Msa0129090:CDS 20.0%
!! GGTATAATAATCATAGATAT+TGG - chr1_3:58901800-58901819 Msa0129090:intron 20.0%
!! GAAAAAAAAAAATTATCAGG+AGG + chr1_3:58902307-58902326 None:intergenic 20.0%
!!! CATTTTAAACATGATATCAA+TGG - chr1_3:58902495-58902514 Msa0129090:CDS 20.0%
!! AAACTAAACATAAACGAATA+TGG + chr1_3:58902567-58902586 None:intergenic 20.0%
!!! ATTTTACTGAAAGTAATTGT+AGG + chr1_3:58902855-58902874 None:intergenic 20.0%
!!! AAATGGTCTTAATTTTTTGA+CGG + chr1_3:58903386-58903405 None:intergenic 20.0%
!! GATAAACAATTCAATAGATA+TGG + chr1_3:58903624-58903643 None:intergenic 20.0%
!! TAATAAAAGTAATTGCAATG+AGG + chr1_3:58903933-58903952 None:intergenic 20.0%
!!! TTTTTGTCATTGAAGTATAA+GGG + chr1_3:58904128-58904147 None:intergenic 20.0%
!! AAATGTTTAAGAAAAAGGAT+GGG + chr1_3:58904292-58904311 None:intergenic 20.0%
!!! TAATCATTTTTACCATTTAG+AGG - chr1_3:58904525-58904544 Msa0129090:intron 20.0%
!!! AATCATTTTTACCATTTAGA+GGG - chr1_3:58904526-58904545 Msa0129090:intron 20.0%
!!! AGTTGAATTTGATTAGATTT+TGG + chr1_3:58904837-58904856 None:intergenic 20.0%
!! AAATACAATCTATTTGGATT+TGG + chr1_3:58905035-58905054 None:intergenic 20.0%
!!! AATCCAAATAGATTGTATTT+TGG - chr1_3:58905035-58905054 Msa0129090:intron 20.0%
!!! TTTTATTTTTGTGGTATTTG+TGG - chr1_3:58905513-58905532 Msa0129090:intron 20.0%
!! TAAAATGAAGAATGAGTTTA+TGG - chr1_3:58905592-58905611 Msa0129090:intron 20.0%
!! TAGTTCATATATAATTTCCT+TGG - chr1_3:58906130-58906149 Msa0129090:intron 20.0%
!!! TTATTTCTACAGATTTAAAG+AGG + chr1_3:58906242-58906261 None:intergenic 20.0%
!! AAGATAAATACCACTTTAAA+TGG + chr1_3:58906653-58906672 None:intergenic 20.0%
!!! GTTTATGAAGTTTATTTTGT+TGG - chr1_3:58906695-58906714 Msa0129090:intron 20.0%
!! TTAAAATCTTCCATCTTTAA+GGG + chr1_3:58907364-58907383 None:intergenic 20.0%
!!! TTTAAAATCTTCCATCTTTA+AGG + chr1_3:58907365-58907384 None:intergenic 20.0%
!! AGATTATTCACTTTCTATAA+TGG + chr1_3:58908168-58908187 None:intergenic 20.0%
!!! ATAAGGGAAATTATTGGTTT+TGG + chr1_3:58894545-58894564 None:intergenic 25.0%
!!! ATTTTTGTTTGTGTTGAAAC+AGG - chr1_3:58894608-58894627 Msa0129090:three_prime_UTR 25.0%
!! TTTTTGCTTTGTGAGATTTA+TGG - chr1_3:58894884-58894903 Msa0129090:three_prime_UTR 25.0%
!! GTTTCTTTGTCTTATTAAAG+TGG - chr1_3:58895090-58895109 Msa0129090:intron 25.0%
!!! ACCATTTTATTGACTAGTTT+TGG - chr1_3:58895162-58895181 Msa0129090:CDS 25.0%
! ACCAAAACTAGTCAATAAAA+TGG + chr1_3:58895166-58895185 None:intergenic 25.0%
!!! GGTTATTAGTTTGTCTAAAA+TGG - chr1_3:58895215-58895234 Msa0129090:CDS 25.0%
!! GTACAATGTTGGTTAATTTA+CGG - chr1_3:58895271-58895290 Msa0129090:intron 25.0%
!!! ACACTTATTCATTTTAGTAG+GGG + chr1_3:58895660-58895679 None:intergenic 25.0%
!! TTTGAATTGGTGATATGAAA+TGG + chr1_3:58895795-58895814 None:intergenic 25.0%
! AAATTAAAGTGAAACTCTCT+TGG + chr1_3:58895844-58895863 None:intergenic 25.0%
!!! AGAGAGTTTCACTTTAATTT+TGG - chr1_3:58895844-58895863 Msa0129090:intron 25.0%
!!! GAGAGTTTCACTTTAATTTT+GGG - chr1_3:58895845-58895864 Msa0129090:intron 25.0%
! TAATTAGAAGGGAGAATTAT+TGG + chr1_3:58895876-58895895 None:intergenic 25.0%
! AGAATATCATTAGGTCAAAA+CGG + chr1_3:58896330-58896349 None:intergenic 25.0%
! CAACAAATGAGAATATCATT+AGG + chr1_3:58896339-58896358 None:intergenic 25.0%
! ACTTCACATTACTATTATCT+TGG - chr1_3:58896503-58896522 Msa0129090:intron 25.0%
! CTTCACATTACTATTATCTT+GGG - chr1_3:58896504-58896523 Msa0129090:intron 25.0%
! TAATTACCACTTCAGATTAT+AGG - chr1_3:58896592-58896611 Msa0129090:CDS 25.0%
!!! TTTAGTGATACTTGCTTTTT+TGG - chr1_3:58896641-58896660 Msa0129090:CDS 25.0%
!!! TTAGTGATACTTGCTTTTTT+GGG - chr1_3:58896642-58896661 Msa0129090:CDS 25.0%
! ATCAAGATTCAAGATCTAAT+GGG + chr1_3:58896771-58896790 None:intergenic 25.0%
! AATCAAGATTCAAGATCTAA+TGG + chr1_3:58896772-58896791 None:intergenic 25.0%
! ATAAGAAAACGTTAGAATAG+TGG + chr1_3:58896933-58896952 None:intergenic 25.0%
! GTTAACAAATAAGGAAAAAG+TGG - chr1_3:58897004-58897023 Msa0129090:intron 25.0%
!!! TTTTTGGAAAATCCAATGAT+GGG + chr1_3:58897084-58897103 None:intergenic 25.0%
! AATGCTATACTTTACTTTGA+AGG + chr1_3:58897655-58897674 None:intergenic 25.0%
! ATTTATTGTGAGTGTGAAAT+TGG - chr1_3:58897730-58897749 Msa0129090:intron 25.0%
! TTTATTGTGAGTGTGAAATT+GGG - chr1_3:58897731-58897750 Msa0129090:intron 25.0%
!! GGGAGTTTTTATCTAATTTA+TGG - chr1_3:58897751-58897770 Msa0129090:intron 25.0%
!! TTTTCAGATTACACTCTTAT+AGG - chr1_3:58897814-58897833 Msa0129090:intron 25.0%
! ATAAATTACATTGACGACAT+TGG + chr1_3:58897918-58897937 None:intergenic 25.0%
! AATGTCGTCAATGTAATTTA+TGG - chr1_3:58897917-58897936 Msa0129090:intron 25.0%
!! AATAGATCTGAATTTGTTTG+AGG + chr1_3:58898083-58898102 None:intergenic 25.0%
! ATTCATTTCAGTGATATCTT+TGG + chr1_3:58898116-58898135 None:intergenic 25.0%
!!! TCTTATGATGGAACAATTTT+AGG + chr1_3:58898163-58898182 None:intergenic 25.0%
! CAAAAAGATAAATTCTTGCT+AGG + chr1_3:58898419-58898438 None:intergenic 25.0%
!!! ACTAACATGTATTTTTGCAA+AGG + chr1_3:58898482-58898501 None:intergenic 25.0%
! TTTCTTCCATTGATATCTAA+TGG - chr1_3:58898553-58898572 Msa0129090:CDS 25.0%
! TTCTTCCATTGATATCTAAT+GGG - chr1_3:58898554-58898573 Msa0129090:CDS 25.0%
! TTCATTAAGTTCAGAAAAAG+AGG + chr1_3:58898747-58898766 None:intergenic 25.0%
! AACATTTGGATCTTCATTAA+CGG + chr1_3:58898954-58898973 None:intergenic 25.0%
! ATAATATGGGAAACTTTCAA+AGG + chr1_3:58899248-58899267 None:intergenic 25.0%
! AAAGTTTCCCATATTATCTA+AGG - chr1_3:58899251-58899270 Msa0129090:intron 25.0%
! ATTTGCACCTTAGATAATAT+GGG + chr1_3:58899261-58899280 None:intergenic 25.0%
! TATTTGCACCTTAGATAATA+TGG + chr1_3:58899262-58899281 None:intergenic 25.0%
! ATTAGCAACAAAGAATATCA+AGG + chr1_3:58899389-58899408 None:intergenic 25.0%
! AATCATACAAACAAGAATGA+CGG + chr1_3:58899625-58899644 None:intergenic 25.0%
!! TATGTTTATGGAGTTTTTGT+AGG - chr1_3:58899842-58899861 Msa0129090:intron 25.0%
!! ATGTTTATGGAGTTTTTGTA+GGG - chr1_3:58899843-58899862 Msa0129090:intron 25.0%
!! TATACTTCGTAGCATTTTTA+CGG - chr1_3:58900477-58900496 Msa0129090:CDS 25.0%
! TTAATAGCATTGTAATGCAT+TGG - chr1_3:58900557-58900576 Msa0129090:intron 25.0%
!!! AGTTTATTTTTTGTTCGTGT+TGG - chr1_3:58900970-58900989 Msa0129090:CDS 25.0%
! ATATACAAATAAGTGGCAAA+TGG + chr1_3:58901215-58901234 None:intergenic 25.0%
! GCATACAATATACAAATAAG+TGG + chr1_3:58901222-58901241 None:intergenic 25.0%
!! TAGTAACAACTTTTAATGCA+TGG + chr1_3:58901255-58901274 None:intergenic 25.0%
! TGCTATTAATGAAATCTTTG+AGG - chr1_3:58901343-58901362 Msa0129090:intron 25.0%
!! GAATGAATTGAAACAACTTT+TGG + chr1_3:58901390-58901409 None:intergenic 25.0%
! TGTTCACAATAGCAAAAAAA+GGG + chr1_3:58901434-58901453 None:intergenic 25.0%
! ATGTTCACAATAGCAAAAAA+AGG + chr1_3:58901435-58901454 None:intergenic 25.0%
! ATCTTTAATCAACAACACTA+GGG + chr1_3:58901488-58901507 None:intergenic 25.0%
! TATCTTTAATCAACAACACT+AGG + chr1_3:58901489-58901508 None:intergenic 25.0%
! GTTGATTAAAGATATAGAGA+AGG - chr1_3:58901495-58901514 Msa0129090:CDS 25.0%
! AACAAACCAAATTGTAGTAT+AGG + chr1_3:58901987-58902006 None:intergenic 25.0%
!!! TACTACAATTTGGTTTGTTT+AGG - chr1_3:58901988-58902007 Msa0129090:intron 25.0%
!! TCTGTATTGTAACTTTGTTT+GGG + chr1_3:58902084-58902103 None:intergenic 25.0%
! ATCTGTATTGTAACTTTGTT+TGG + chr1_3:58902085-58902104 None:intergenic 25.0%
!! AAATTAATCTAAGATACCTG+AGG + chr1_3:58902109-58902128 None:intergenic 25.0%
!! TTTGTGAAATTTCCTCTTTT+AGG - chr1_3:58902454-58902473 Msa0129090:CDS 25.0%
! AGAATTGTTAAACCTAAAAG+AGG + chr1_3:58902469-58902488 None:intergenic 25.0%
!!! TAGTTTGCATTTTTCCTTAT+AGG - chr1_3:58902581-58902600 Msa0129090:intron 25.0%
!! AGTTTGCATTTTTCCTTATA+GGG - chr1_3:58902582-58902601 Msa0129090:intron 25.0%
! TAGCATATAGAAATAGCTTA+TGG + chr1_3:58902708-58902727 None:intergenic 25.0%
!!! TTATAGGTATGTTTTATTCG+AGG + chr1_3:58902915-58902934 None:intergenic 25.0%
! TAAAGCAAAAGCTAAGTTAT+AGG + chr1_3:58902931-58902950 None:intergenic 25.0%
!! TGTTTTCGCTCAAATTATTA+GGG + chr1_3:58903324-58903343 None:intergenic 25.0%
!! TTGTTTTCGCTCAAATTATT+AGG + chr1_3:58903325-58903344 None:intergenic 25.0%
! TGCACAATTGTAAAGTAAAA+TGG + chr1_3:58903403-58903422 None:intergenic 25.0%
! GAGCGTAAAAAAATCATTAA+AGG - chr1_3:58903472-58903491 Msa0129090:CDS 25.0%
!! AGGAAAAAGGTATAAAATTG+TGG + chr1_3:58903515-58903534 None:intergenic 25.0%
! ATCTATTGAATTGTTTATCC+AGG - chr1_3:58903625-58903644 Msa0129090:CDS 25.0%
! TTCATACTTCAAATGATTTG+TGG - chr1_3:58903874-58903893 Msa0129090:CDS 25.0%
!! CTTTTTGTCATTGAAGTATA+AGG + chr1_3:58904129-58904148 None:intergenic 25.0%
! CAAATGTTTAAGAAAAAGGA+TGG + chr1_3:58904293-58904312 None:intergenic 25.0%
!! TCCTTTTTCTTAAACATTTG+AGG - chr1_3:58904293-58904312 Msa0129090:intron 25.0%
! TCCTCAAATGTTTAAGAAAA+AGG + chr1_3:58904297-58904316 None:intergenic 25.0%
! TTATTGGGTTAAATCAATGT+GGG + chr1_3:58904394-58904413 None:intergenic 25.0%
! AACAAGATGAACATTCATTT+AGG + chr1_3:58904491-58904510 None:intergenic 25.0%
!! TTTTGTAGTAAGATAGTGTA+TGG + chr1_3:58904712-58904731 None:intergenic 25.0%
!! TTTACAACAGTCAATACTTT+TGG + chr1_3:58904922-58904941 None:intergenic 25.0%
! AGAATGAGTTTATGGTTAAT+TGG - chr1_3:58905600-58905619 Msa0129090:intron 25.0%
! GAATGAGTTTATGGTTAATT+GGG - chr1_3:58905601-58905620 Msa0129090:intron 25.0%
! TAGATGAGATTTATTCTAAC+TGG - chr1_3:58905770-58905789 Msa0129090:intron 25.0%
!!! CATTTTAGCAAAAGAAGAAT+TGG - chr1_3:58905881-58905900 Msa0129090:intron 25.0%
! AATGCTTCTAAATTAACATC+AGG + chr1_3:58905909-58905928 None:intergenic 25.0%
! AAAACAATGATGAGAAATCA+TGG + chr1_3:58906165-58906184 None:intergenic 25.0%
!! TGAGTAAATGAAGATCTTTT+TGG - chr1_3:58906758-58906777 Msa0129090:intron 25.0%
! AATGTTTCATGTATGTAAAC+AGG - chr1_3:58907513-58907532 Msa0129090:intron 25.0%
! GCAATAAATTCTACAATGAT+AGG + chr1_3:58907653-58907672 None:intergenic 25.0%
! CATTGTAGAATTTATTGCTT+AGG - chr1_3:58907655-58907674 Msa0129090:intron 25.0%
! GGTAATATACAATAAAGGAA+GGG + chr1_3:58907735-58907754 None:intergenic 25.0%
! TGGTAATATACAATAAAGGA+AGG + chr1_3:58907736-58907755 None:intergenic 25.0%
! CCTATGGTAATATACAATAA+AGG + chr1_3:58907740-58907759 None:intergenic 25.0%
! CCTTTATTGTATATTACCAT+AGG - chr1_3:58907737-58907756 Msa0129090:intron 25.0%
! TCTTAGCAAATATGAGATAT+AGG - chr1_3:58907818-58907837 Msa0129090:CDS 25.0%
!!! TCAATAATTTTTGGTCTGTC+TGG - chr1_3:58894354-58894373 Msa0129090:three_prime_UTR 30.0%
!!! GATCGTTTTTTTGAGTTTGA+AGG + chr1_3:58894505-58894524 None:intergenic 30.0%
AAACTCAAAAAAACGATCCA+AGG - chr1_3:58894507-58894526 Msa0129090:three_prime_UTR 30.0%
! TTTGGTTTACATAAGAACCT+TGG + chr1_3:58894527-58894546 None:intergenic 30.0%
TGAGGAATAAGGGAAATTAT+TGG + chr1_3:58894551-58894570 None:intergenic 30.0%
AATTTACAAACCCATTTGTG+AGG + chr1_3:58894569-58894588 None:intergenic 30.0%
! ATGGATTTTGTGTTAGAATC+AGG - chr1_3:58894903-58894922 Msa0129090:exon 30.0%
TCAAATTGCTGAGAAATCAA+AGG - chr1_3:58894926-58894945 Msa0129090:CDS 30.0%
AATCTAATTCTAAGTCAGCT+TGG - chr1_3:58894988-58895007 Msa0129090:CDS 30.0%
ATCTAATTCTAAGTCAGCTT+GGG - chr1_3:58894989-58895008 Msa0129090:CDS 30.0%
!!! TGTTTTGTTTGCAATTTGCA+TGG - chr1_3:58895065-58895084 Msa0129090:intron 30.0%
ACAAGTTATACACTAAGTTG+AGG + chr1_3:58895297-58895316 None:intergenic 30.0%
GTCGTTATGTAATCTATCTT+TGG + chr1_3:58895358-58895377 None:intergenic 30.0%
ACTATGTCGAACAAGATTAA+AGG - chr1_3:58895460-58895479 Msa0129090:intron 30.0%
! TAGTTTAGAGTGTTTCTTGA+GGG + chr1_3:58895536-58895555 None:intergenic 30.0%
! ATAGTTTAGAGTGTTTCTTG+AGG + chr1_3:58895537-58895556 None:intergenic 30.0%
TGATAGAACTTGAAAATGTG+AGG + chr1_3:58895698-58895717 None:intergenic 30.0%
! TTCAAGTTCTATCAAACTTG+AGG - chr1_3:58895704-58895723 Msa0129090:intron 30.0%
TCTTTATTCAAATGATGCAG+TGG - chr1_3:58895729-58895748 Msa0129090:intron 30.0%
AGTGGAGTTGAACAAAAAAA+AGG + chr1_3:58895757-58895776 None:intergenic 30.0%
! ATTGGTGATATGAAATGGAA+TGG + chr1_3:58895790-58895809 None:intergenic 30.0%
!!! AGTTTTCTAGTTTGAAGTGA+AGG + chr1_3:58896067-58896086 None:intergenic 30.0%
GAAAACTTGTATCCTTGTAA+AGG - chr1_3:58896080-58896099 Msa0129090:intron 30.0%
CATTGCTAATATCATCTCTT+TGG + chr1_3:58896114-58896133 None:intergenic 30.0%
ATAAGTTAGAAGCCTTACTA+TGG - chr1_3:58896136-58896155 Msa0129090:intron 30.0%
AATTCAAGCTTTCCATAGTA+AGG + chr1_3:58896151-58896170 None:intergenic 30.0%
!! AAATGAAGGTTGAAAGCATT+GGG + chr1_3:58896201-58896220 None:intergenic 30.0%
! AAAATGAAGGTTGAAAGCAT+TGG + chr1_3:58896202-58896221 None:intergenic 30.0%
GAATATCATTAGGTCAAAAC+GGG + chr1_3:58896329-58896348 None:intergenic 30.0%
!!! TAGTGATACTTGCTTTTTTG+GGG - chr1_3:58896643-58896662 Msa0129090:CDS 30.0%
! AAAGCATTATCTTCTCTTGT+TGG + chr1_3:58896726-58896745 None:intergenic 30.0%
ATTGTATTTCCCTCTTAAAC+AGG + chr1_3:58896816-58896835 None:intergenic 30.0%
ATTCTTCATTCAAGAGACTT+AGG - chr1_3:58897058-58897077 Msa0129090:intron 30.0%
!! CTTTTTGGAAAATCCAATGA+TGG + chr1_3:58897085-58897104 None:intergenic 30.0%
GCTTATGTGTTCTTTAGATA+TGG + chr1_3:58897193-58897212 None:intergenic 30.0%
AAAGATGCTGTGAAAGTTAA+CGG + chr1_3:58897292-58897311 None:intergenic 30.0%
TATTGCTGGAGATTCAATAT+TGG + chr1_3:58897585-58897604 None:intergenic 30.0%
AGATTACACTCTTATAGGTT+TGG - chr1_3:58897819-58897838 Msa0129090:intron 30.0%
TCAATGTAATTTATGGCTGA+AGG - chr1_3:58897924-58897943 Msa0129090:intron 30.0%
CACAAAACATTACTAACAGA+GGG + chr1_3:58897952-58897971 None:intergenic 30.0%
AAAGATCTTATCTCTTCAGT+AGG + chr1_3:58898032-58898051 None:intergenic 30.0%
AAAGTTAATGGAAAGATGTG+TGG - chr1_3:58898303-58898322 Msa0129090:intron 30.0%
AAGTTAATGGAAAGATGTGT+GGG - chr1_3:58898304-58898323 Msa0129090:intron 30.0%
!! AAATCCCGTCATATTTTAAG+TGG - chr1_3:58898330-58898349 Msa0129090:CDS 30.0%
AAAGATCTAAATCCATGCTA+AGG + chr1_3:58898582-58898601 None:intergenic 30.0%
! TACATTCATTTGAAGTGCAA+TGG - chr1_3:58899528-58899547 Msa0129090:intron 30.0%
ATCATACAAACAAGAATGAC+GGG + chr1_3:58899624-58899643 None:intergenic 30.0%
AATCTTAGAAAACATACACC+AGG + chr1_3:58899810-58899829 None:intergenic 30.0%
TCCTTCTGTTGTTATGTTTA+TGG - chr1_3:58899830-58899849 Msa0129090:intron 30.0%
TCCATAAACATAACAACAGA+AGG + chr1_3:58899834-58899853 None:intergenic 30.0%
CTAAAGAAATTCCAATTCCA+AGG - chr1_3:58900053-58900072 Msa0129090:intron 30.0%
ACTGAAGCAAGAAATTTCTA+CGG - chr1_3:58900204-58900223 Msa0129090:intron 30.0%
ATGATTCTTACATCATTTGC+AGG - chr1_3:58900368-58900387 Msa0129090:intron 30.0%
TTCATACAAACTTACCTTGA+AGG + chr1_3:58900452-58900471 None:intergenic 30.0%
!! GCTTTTGAAAATTTCCACTT+TGG - chr1_3:58900623-58900642 Msa0129090:intron 30.0%
GTTGTCATTAACTCATTATG+TGG - chr1_3:58900682-58900701 Msa0129090:intron 30.0%
TCAGGTTCAAGTAAATTAGT+TGG + chr1_3:58900715-58900734 None:intergenic 30.0%
TGGATATTATATTTGACTGC+TGG - chr1_3:58900889-58900908 Msa0129090:intron 30.0%
!! CTCCTTGCTTTTGAAAATAA+CGG - chr1_3:58901063-58901082 Msa0129090:CDS 30.0%
!! TCCTTGCTTTTGAAAATAAC+GGG - chr1_3:58901064-58901083 Msa0129090:CDS 30.0%
!! AATAACGGGTCTTCAAAAAT+TGG - chr1_3:58901078-58901097 Msa0129090:CDS 30.0%
TTTGAGAAATCAATTCCAGA+TGG - chr1_3:58901108-58901127 Msa0129090:intron 30.0%
! TTTTGGACAAGTATAACACT+GGG + chr1_3:58901373-58901392 None:intergenic 30.0%
GTTCACAATAGCAAAAAAAG+GGG + chr1_3:58901433-58901452 None:intergenic 30.0%
AGTGATGATATCATGATTAG+AGG - chr1_3:58901660-58901679 Msa0129090:intron 30.0%
AGCCTTCTGTTTACAAAATT+TGG - chr1_3:58901741-58901760 Msa0129090:intron 30.0%
! CTCCAAATTTTGTAAACAGA+AGG + chr1_3:58901746-58901765 None:intergenic 30.0%
CTTCTGTTTACAAAATTTGG+AGG - chr1_3:58901744-58901763 Msa0129090:intron 30.0%
!! CATTTTACCCTCCTTTTTTA+TGG - chr1_3:58901853-58901872 Msa0129090:intron 30.0%
! ATGGATGGCTTTTTGAATAT+TGG - chr1_3:58901883-58901902 Msa0129090:intron 30.0%
TCAACATACAATGTTGTAGA+CGG - chr1_3:58901912-58901931 Msa0129090:intron 30.0%
! TTGTTTAGGATAACTTTACG+AGG - chr1_3:58902002-58902021 Msa0129090:intron 30.0%
! TTGAGTTGCTTCATTACTTT+GGG + chr1_3:58902052-58902071 None:intergenic 30.0%
!! TTTTACTTGTTACCTTGTAC+AGG - chr1_3:58902177-58902196 Msa0129090:intron 30.0%
GCTATTGGGAGATTATTTAT+CGG - chr1_3:58902396-58902415 Msa0129090:CDS 30.0%
CTATTGGGAGATTATTTATC+GGG - chr1_3:58902397-58902416 Msa0129090:CDS 30.0%
!!! TTTTTTATGGCTACTTATCC+TGG - chr1_3:58902537-58902556 Msa0129090:intron 30.0%
! ATTTTTCCTTATAGGGCTAA+GGG - chr1_3:58902589-58902608 Msa0129090:intron 30.0%
! TATTTCTATATGCTATACCG+AGG - chr1_3:58902713-58902732 Msa0129090:intron 30.0%
TTAGTACTTGTGTAAGTGTT+TGG + chr1_3:58902806-58902825 None:intergenic 30.0%
AAAGTAATTGTAGGACTCAA+GGG + chr1_3:58902846-58902865 None:intergenic 30.0%
TAAAATGATCCACTTGATGA+TGG - chr1_3:58902869-58902888 Msa0129090:intron 30.0%
TTTGAAAATCCATCATCAAG+TGG + chr1_3:58902881-58902900 None:intergenic 30.0%
! TGAGGTTCTTTTAATGATTC+AGG - chr1_3:58903000-58903019 Msa0129090:CDS 30.0%
TGTTAGAGTTTGATCTTTGA+TGG + chr1_3:58903071-58903090 None:intergenic 30.0%
AGTAATATTGCATGTTCAGA+AGG + chr1_3:58903138-58903157 None:intergenic 30.0%
TATGGGTTTAACATTCTACA+GGG - chr1_3:58903431-58903450 Msa0129090:CDS 30.0%
AATATGTACTCCGCAAAATA+GGG + chr1_3:58903538-58903557 None:intergenic 30.0%
AAATATGTACTCCGCAAAAT+AGG + chr1_3:58903539-58903558 None:intergenic 30.0%
! GAGTACATATTTTGTAGTAC+TGG - chr1_3:58903547-58903566 Msa0129090:CDS 30.0%
ACTTTCACGGTTTGAATAAT+GGG - chr1_3:58903590-58903609 Msa0129090:CDS 30.0%
TTATTCCACCAACTGATATT+GGG - chr1_3:58903693-58903712 Msa0129090:CDS 30.0%
!! TGGAGCTTTAGAAAATGTTA+AGG - chr1_3:58903733-58903752 Msa0129090:CDS 30.0%
AAATGTTAAGGACACCTTAA+AGG - chr1_3:58903745-58903764 Msa0129090:CDS 30.0%
TGTCCTTTGCAAAATAATTC+AGG + chr1_3:58903797-58903816 None:intergenic 30.0%
!! ACTTTTATTATAGCCTTGCA+AGG - chr1_3:58903943-58903962 Msa0129090:intron 30.0%
!! CTTTTATTATAGCCTTGCAA+GGG - chr1_3:58903944-58903963 Msa0129090:intron 30.0%
! AAACACTTTTACTGTACCAT+TGG - chr1_3:58904098-58904117 Msa0129090:intron 30.0%
!! TATCATTTTGTTTGTTGCAG+TGG - chr1_3:58904150-58904169 Msa0129090:intron 30.0%
TCATCAACAAAAATAACGCT+TGG + chr1_3:58904233-58904252 None:intergenic 30.0%
!!! AAGCGTTATTTTTGTTGATG+AGG - chr1_3:58904232-58904251 Msa0129090:CDS 30.0%
!!! GTTATTTTTGTTGATGAGGT+TGG - chr1_3:58904236-58904255 Msa0129090:CDS 30.0%
! TTAACACTCACTCTTTTGTT+GGG - chr1_3:58904348-58904367 Msa0129090:intron 30.0%
CTTATTGGGTTAAATCAATG+TGG + chr1_3:58904395-58904414 None:intergenic 30.0%
! AAAATGTTTAGCTTAGTGCT+AGG + chr1_3:58904442-58904461 None:intergenic 30.0%
GAACATTCATTTAGGAAGAA+TGG + chr1_3:58904483-58904502 None:intergenic 30.0%
GTGTATGCTTATATAACTAG+TGG - chr1_3:58904551-58904570 Msa0129090:intron 30.0%
ATAACTAGTGGTTATTCACA+TGG - chr1_3:58904563-58904582 Msa0129090:intron 30.0%
TGACTGTTGTAAATTTGCAA+TGG - chr1_3:58904929-58904948 Msa0129090:intron 30.0%
GACTGTTGTAAATTTGCAAT+GGG - chr1_3:58904930-58904949 Msa0129090:intron 30.0%
GGACCAAAATACAATCTATT+TGG + chr1_3:58905041-58905060 None:intergenic 30.0%
!!! TAGATTGTATTTTGGTCCAA+AGG - chr1_3:58905043-58905062 Msa0129090:intron 30.0%
!!! AGATTGTATTTTGGTCCAAA+GGG - chr1_3:58905044-58905063 Msa0129090:intron 30.0%
TATTTATACTCACCAGTTCA+TGG - chr1_3:58905107-58905126 Msa0129090:intron 30.0%
ATTTATACTCACCAGTTCAT+GGG - chr1_3:58905108-58905127 Msa0129090:intron 30.0%
TTTAGTGATTTACATTGCGA+TGG - chr1_3:58905148-58905167 Msa0129090:intron 30.0%
TTAGTGATTTACATTGCGAT+GGG - chr1_3:58905149-58905168 Msa0129090:intron 30.0%
!!! ACTTTTGGTTCGAATTAGTT+TGG + chr1_3:58905347-58905366 None:intergenic 30.0%
!!! ACGCTAAACTTTAGAACTTT+TGG + chr1_3:58905362-58905381 None:intergenic 30.0%
TCACAAAAACTATATGACTG+AGG + chr1_3:58905401-58905420 None:intergenic 30.0%
CATAAGAAATTGGAAATCTG+AGG + chr1_3:58905456-58905475 None:intergenic 30.0%
CTCAGATTTCCAATTTCTTA+TGG - chr1_3:58905454-58905473 Msa0129090:intron 30.0%
TGTATTGAAACACAACCTTT+AGG + chr1_3:58905965-58905984 None:intergenic 30.0%
!! TTCTCATCATTGTTTTGTCT+TGG - chr1_3:58906169-58906188 Msa0129090:intron 30.0%
GAATCATTATGTAGATGCAA+TGG - chr1_3:58906303-58906322 Msa0129090:intron 30.0%
!! CTGCCTAGAGAATTTATTTT+GGG - chr1_3:58906384-58906403 Msa0129090:intron 30.0%
!!! TGCCTAGAGAATTTATTTTG+GGG - chr1_3:58906385-58906404 Msa0129090:intron 30.0%
! TGACTACTTTAAAAACTCCA+AGG + chr1_3:58906618-58906637 None:intergenic 30.0%
ATACCACTTTAAATGGTTCT+AGG + chr1_3:58906646-58906665 None:intergenic 30.0%
! TTGTTGGCTATTTATTTGCT+TGG - chr1_3:58906711-58906730 Msa0129090:intron 30.0%
GAACACATTCTACAATAAAG+TGG + chr1_3:58907031-58907050 None:intergenic 30.0%
!! CATTTGCTATATTAAAAGGG+AGG + chr1_3:58907166-58907185 None:intergenic 30.0%
ATTTACATGCAATGTCTTTC+AGG - chr1_3:58907273-58907292 Msa0129090:intron 30.0%
! AAGATAGAAAGATGATGGTA+GGG + chr1_3:58907781-58907800 None:intergenic 30.0%
!!! TTGCTAAGAATTTTTTTCGG+AGG + chr1_3:58907807-58907826 None:intergenic 30.0%
!! TTTCAACCATGATGATGGAT+GGG + chr1_3:58894429-58894448 None:intergenic 35.0%
! TCTAGTTTCAACCATGATGA+TGG + chr1_3:58894434-58894453 None:intergenic 35.0%
TTTCCCTTATTCCTCACAAA+TGG - chr1_3:58894555-58894574 Msa0129090:three_prime_UTR 35.0%
TTCCCTTATTCCTCACAAAT+GGG - chr1_3:58894556-58894575 Msa0129090:three_prime_UTR 35.0%
AACCCATTTGTGAGGAATAA+GGG + chr1_3:58894561-58894580 None:intergenic 35.0%
AAACCCATTTGTGAGGAATA+AGG + chr1_3:58894562-58894581 None:intergenic 35.0%
CTCAAAGAATGTTTCATCCA+AGG - chr1_3:58894632-58894651 Msa0129090:three_prime_UTR 35.0%
ACTTTGATACCTATACACTG+AGG + chr1_3:58894792-58894811 None:intergenic 35.0%
ATAATCTAAGCAAGCATGTG+TGG - chr1_3:58894859-58894878 Msa0129090:three_prime_UTR 35.0%
TCTAATTCTAAGTCAGCTTG+GGG - chr1_3:58894990-58895009 Msa0129090:CDS 35.0%
! GCTTATTTCTCAATCTTCTG+AGG - chr1_3:58895016-58895035 Msa0129090:intron 35.0%
! TTGTCTTATTAAAGTGGGAG+TGG - chr1_3:58895096-58895115 Msa0129090:intron 35.0%
TGTTGTGCATTGTACAATGT+TGG - chr1_3:58895260-58895279 Msa0129090:intron 35.0%
! GTGTGTAACTTTTGCTAACA+TGG + chr1_3:58895334-58895353 None:intergenic 35.0%
GACAAAACGCAGAATTTATG+AGG - chr1_3:58895375-58895394 Msa0129090:intron 35.0%
! ATTGATCGTTCGCATTTTCT+TGG - chr1_3:58895560-58895579 Msa0129090:intron 35.0%
! TTGATCGTTCGCATTTTCTT+GGG - chr1_3:58895561-58895580 Msa0129090:intron 35.0%
!! GGGAGTTTTATGAAGAATGA+AGG + chr1_3:58895613-58895632 None:intergenic 35.0%
ATAAAACTCCCTTGATGTAG+TGG - chr1_3:58895622-58895641 Msa0129090:intron 35.0%
GATATGAAATGGAATGGAGT+GGG + chr1_3:58895784-58895803 None:intergenic 35.0%
TGATATGAAATGGAATGGAG+TGG + chr1_3:58895785-58895804 None:intergenic 35.0%
GTTGTGTAGCAAAAGAGAAA+AGG + chr1_3:58895982-58896001 None:intergenic 35.0%
TTGGAAAAGATGCCTTTACA+AGG + chr1_3:58896095-58896114 None:intergenic 35.0%
AAGTGAGAATGAAGCTTCAA+TGG + chr1_3:58896177-58896196 None:intergenic 35.0%
AGGATGTGTGAAGAAAATGA+AGG + chr1_3:58896215-58896234 None:intergenic 35.0%
TCACACATCCTAACTACAAA+TGG - chr1_3:58896224-58896243 Msa0129090:intron 35.0%
TAGAAACTTAGTGGTGTGTT+GGG + chr1_3:58896250-58896269 None:intergenic 35.0%
AACACACCACTAAGTTTCTA+GGG - chr1_3:58896250-58896269 Msa0129090:intron 35.0%
!! AATGGTGCTATTAGCTACAT+TGG - chr1_3:58896381-58896400 Msa0129090:intron 35.0%
! TGCTATTAGCTACATTGGTT+TGG - chr1_3:58896386-58896405 Msa0129090:intron 35.0%
TGTGCATTACCATCAAGAAA+TGG - chr1_3:58896538-58896557 Msa0129090:intron 35.0%
!! AAAGCATTGCCATTTCTTGA+TGG + chr1_3:58896550-58896569 None:intergenic 35.0%
ACACATCCTATAATCTGAAG+TGG + chr1_3:58896601-58896620 None:intergenic 35.0%
!!! AGTGATACTTGCTTTTTTGG+GGG - chr1_3:58896644-58896663 Msa0129090:CDS 35.0%
ATTAATCTGAGTTAGCCAGA+TGG - chr1_3:58896789-58896808 Msa0129090:intron 35.0%
TATACTGTTGTCCCAGATTT+GGG + chr1_3:58896894-58896913 None:intergenic 35.0%
TAAGGAAAAAGTGGTCATCT+AGG - chr1_3:58897013-58897032 Msa0129090:intron 35.0%
GAAGAATTGTTTCCCTCTTT+GGG + chr1_3:58897045-58897064 None:intergenic 35.0%
TGAAGAATTGTTTCCCTCTT+TGG + chr1_3:58897046-58897065 None:intergenic 35.0%
!!! TTTTTAGGGTTTGGCACATT+GGG + chr1_3:58897108-58897127 None:intergenic 35.0%
!!! TTTTTTAGGGTTTGGCACAT+TGG + chr1_3:58897109-58897128 None:intergenic 35.0%
!!! TAATGCGCTTTTTTAGGGTT+TGG + chr1_3:58897117-58897136 None:intergenic 35.0%
GATATGGAGATGTAAAACAG+CGG + chr1_3:58897177-58897196 None:intergenic 35.0%
CATCACCTCCACTTAAAATA+AGG - chr1_3:58897242-58897261 Msa0129090:intron 35.0%
!!! AAATCCCGCCTTATTTTAAG+TGG + chr1_3:58897253-58897272 None:intergenic 35.0%
AAGTTAACGGAAAGACGTAA+GGG + chr1_3:58897279-58897298 None:intergenic 35.0%
AAAGTTAACGGAAAGACGTA+AGG + chr1_3:58897280-58897299 None:intergenic 35.0%
TTGCATTACTGGGAATCATA+GGG + chr1_3:58897319-58897338 None:intergenic 35.0%
AGAATTACACATGACAATGG+TGG - chr1_3:58897361-58897380 Msa0129090:intron 35.0%
ATTGACATGAAGCACAACAT+CGG + chr1_3:58897443-58897462 None:intergenic 35.0%
GCACAAAACATTACTAACAG+AGG + chr1_3:58897953-58897972 None:intergenic 35.0%
TGCAGAATTACAAACAACTG+TGG + chr1_3:58898226-58898245 None:intergenic 35.0%
TTGCATTGCTGGAAATCATA+GGG - chr1_3:58898265-58898284 Msa0129090:intron 35.0%
ACCTCCACTTAAAATATGAC+GGG + chr1_3:58898337-58898356 None:intergenic 35.0%
CACCTCCACTTAAAATATGA+CGG + chr1_3:58898338-58898357 None:intergenic 35.0%
TGCTAGGGAATCATATCTAA+AGG + chr1_3:58898403-58898422 None:intergenic 35.0%
AGGAACCCATTAGATATCAA+TGG + chr1_3:58898562-58898581 None:intergenic 35.0%
! TCTATCTGGTTCGTCATTAA+TGG + chr1_3:58898891-58898910 None:intergenic 35.0%
TCAGCAGAAAAAACTCTATC+TGG + chr1_3:58898905-58898924 None:intergenic 35.0%
!!! AGATAGAGTTTTTTCTGCTG+AGG - chr1_3:58898904-58898923 Msa0129090:intron 35.0%
ATTTGGATCTTCATTAACGG+TGG + chr1_3:58898951-58898970 None:intergenic 35.0%
ACTTCTACAGCAACAACATT+TGG + chr1_3:58898968-58898987 None:intergenic 35.0%
CAATAATGGTCTCAATTTGC+AGG + chr1_3:58899035-58899054 None:intergenic 35.0%
!! TGTCCTGAATTTGATTTGAG+TGG - chr1_3:58899073-58899092 Msa0129090:CDS 35.0%
TTGCCACTCAAATCAAATTC+AGG + chr1_3:58899079-58899098 None:intergenic 35.0%
CTTACGTTCTTCCAATATCT+TGG + chr1_3:58899107-58899126 None:intergenic 35.0%
CAAGATATTGGAAGAACGTA+AGG - chr1_3:58899105-58899124 Msa0129090:CDS 35.0%
GGAAGAACGTAAGGAATTAA+AGG - chr1_3:58899114-58899133 Msa0129090:CDS 35.0%
! TTGGGGTATCAACATCTTTA+AGG + chr1_3:58899144-58899163 None:intergenic 35.0%
CATCTGTAAGCTATCCTTTA+AGG + chr1_3:58899194-58899213 None:intergenic 35.0%
TCATACAAACAAGAATGACG+GGG + chr1_3:58899623-58899642 None:intergenic 35.0%
!! TGTAGGCTCTGAAATATATC+AGG - chr1_3:58899716-58899735 Msa0129090:intron 35.0%
TTCGTTTCATTCATTGACCA+TGG - chr1_3:58899898-58899917 Msa0129090:intron 35.0%
TCATTGACCATGGTCTTTAT+TGG - chr1_3:58899908-58899927 Msa0129090:intron 35.0%
TCTCATCTGTTTGATTCTGT+TGG - chr1_3:58899934-58899953 Msa0129090:intron 35.0%
CTCATCTGTTTGATTCTGTT+GGG - chr1_3:58899935-58899954 Msa0129090:intron 35.0%
GTAGAATCAACTTCCTTCAA+TGG + chr1_3:58900034-58900053 None:intergenic 35.0%
ATAGATGTTCTTTCAGTCCT+TGG + chr1_3:58900073-58900092 None:intergenic 35.0%
TGTATATGTATTGTAGCAGC+CGG + chr1_3:58900115-58900134 None:intergenic 35.0%
!! AGTGTTGATGCCCAAATTAT+AGG - chr1_3:58900154-58900173 Msa0129090:intron 35.0%
TGTGGATCCACCTATAATTT+GGG + chr1_3:58900167-58900186 None:intergenic 35.0%
ATGTGGATCCACCTATAATT+TGG + chr1_3:58900168-58900187 None:intergenic 35.0%
ATTTCTACGGCATCATCAAA+AGG - chr1_3:58900217-58900236 Msa0129090:intron 35.0%
!!! AAAGGCAGTGCTTTTAAAAC+AGG - chr1_3:58900235-58900254 Msa0129090:intron 35.0%
!! ATCATATTATTGAAGGCGTC+AGG + chr1_3:58900353-58900372 None:intergenic 35.0%
TTACATCATTTGCAGGTGAT+CGG - chr1_3:58900375-58900394 Msa0129090:intron 35.0%
TACCTTGAAGGAAAAACTTG+TGG + chr1_3:58900440-58900459 None:intergenic 35.0%
TATCATCTCTCTCTACAATC+AGG + chr1_3:58900524-58900543 None:intergenic 35.0%
! TTTGTTTAGCTCAGAATCCT+AGG - chr1_3:58900657-58900676 Msa0129090:intron 35.0%
TGAGTTAATGACAACATCCT+AGG + chr1_3:58900677-58900696 None:intergenic 35.0%
ACGGTTCAATTTAGTTATGC+AGG - chr1_3:58900808-58900827 Msa0129090:CDS 35.0%
CAATTTAGTTATGCAGGCTT+TGG - chr1_3:58900814-58900833 Msa0129090:intron 35.0%
TTCTGTCTGTTATATTGAGC+AGG - chr1_3:58901010-58901029 Msa0129090:CDS 35.0%
TCTGTCTGTTATATTGAGCA+GGG - chr1_3:58901011-58901030 Msa0129090:CDS 35.0%
!! ACCCGTTATTTTCAAAAGCA+AGG + chr1_3:58901068-58901087 None:intergenic 35.0%
ATTCCAGATGGAAATGATCT+TGG - chr1_3:58901120-58901139 Msa0129090:intron 35.0%
CAAATAAGTGGCAAATGGAA+CGG + chr1_3:58901210-58901229 None:intergenic 35.0%
ATCTACCAGTACCAAATGAT+TGG + chr1_3:58901294-58901313 None:intergenic 35.0%
!! AATCATTTGGTACTGGTAGA+TGG - chr1_3:58901293-58901312 Msa0129090:intron 35.0%
TTTGGACAAGTATAACACTG+GGG + chr1_3:58901372-58901391 None:intergenic 35.0%
! CTTTTGGACAAGTATAACAC+TGG + chr1_3:58901374-58901393 None:intergenic 35.0%
! GGTGTTATGTATACTACTTC+AGG + chr1_3:58901412-58901431 None:intergenic 35.0%
TAAAGATATAGAGAAGGGTG+TGG - chr1_3:58901501-58901520 Msa0129090:CDS 35.0%
CCAATTACTACAACATTCTG+TGG + chr1_3:58901568-58901587 None:intergenic 35.0%
CCACAGAATGTTGTAGTAAT+TGG - chr1_3:58901565-58901584 Msa0129090:intron 35.0%
!! ACTACTTGATCTTGCTTTTC+CGG - chr1_3:58901779-58901798 Msa0129090:intron 35.0%
ATTGGTCCTACTACTTTGAT+TGG - chr1_3:58901818-58901837 Msa0129090:intron 35.0%
ACTACACCAATCAAAGTAGT+AGG + chr1_3:58901827-58901846 None:intergenic 35.0%
ACTTTGATTGGTGTAGTTCT+AGG - chr1_3:58901830-58901849 Msa0129090:intron 35.0%
CTCAAAGCCATAAAAAAGGA+GGG + chr1_3:58901863-58901882 None:intergenic 35.0%
TCTCAAAGCCATAAAAAAGG+AGG + chr1_3:58901864-58901883 None:intergenic 35.0%
CCATCTCAAAGCCATAAAAA+AGG + chr1_3:58901867-58901886 None:intergenic 35.0%
!!! CCTTTTTTATGGCTTTGAGA+TGG - chr1_3:58901864-58901883 Msa0129090:intron 35.0%
!!! TTTTATGGCTTTGAGATGGA+TGG - chr1_3:58901868-58901887 Msa0129090:intron 35.0%
CAACATACAATGTTGTAGAC+GGG - chr1_3:58901913-58901932 Msa0129090:intron 35.0%
CATCGACCTATACTACAATT+TGG - chr1_3:58901978-58901997 Msa0129090:intron 35.0%
TGAGTTGCTTCATTACTTTG+GGG + chr1_3:58902051-58902070 None:intergenic 35.0%
! GTTGAGTTGCTTCATTACTT+TGG + chr1_3:58902053-58902072 None:intergenic 35.0%
AAGTAATGAAGCAACTCAAC+AGG - chr1_3:58902053-58902072 Msa0129090:intron 35.0%
ATGAGGCTTTACTTTCTGAT+TGG - chr1_3:58902200-58902219 Msa0129090:intron 35.0%
! AGTTGCTATTGTGTTGTTCT+TGG - chr1_3:58902358-58902377 Msa0129090:CDS 35.0%
! ACGAGAATGAGATTAGCTAT+TGG - chr1_3:58902381-58902400 Msa0129090:CDS 35.0%
! CGAGAATGAGATTAGCTATT+GGG - chr1_3:58902382-58902401 Msa0129090:CDS 35.0%
ATAAACGAATATGGAAGACC+AGG + chr1_3:58902558-58902577 None:intergenic 35.0%
! CATTTTTCCTTATAGGGCTA+AGG - chr1_3:58902588-58902607 Msa0129090:intron 35.0%
! TTTTTCCTTATAGGGCTAAG+GGG - chr1_3:58902590-58902609 Msa0129090:intron 35.0%
TACTTGTGTAAGTGTTTGGA+AGG + chr1_3:58902802-58902821 None:intergenic 35.0%
GAAAGTAATTGTAGGACTCA+AGG + chr1_3:58902847-58902866 None:intergenic 35.0%
CTCATTAGAAGCTTGACAAT+TGG + chr1_3:58902984-58903003 None:intergenic 35.0%
CAATTGTCAAGCTTCTAATG+AGG - chr1_3:58902982-58903001 Msa0129090:CDS 35.0%
! TCAACTCCTTTTACTAGATG+TGG - chr1_3:58903170-58903189 Msa0129090:intron 35.0%
TCTTCTCCACATCTAGTAAA+AGG + chr1_3:58903179-58903198 None:intergenic 35.0%
CTAGATGTGGAGAAGATTAT+TGG - chr1_3:58903183-58903202 Msa0129090:intron 35.0%
CCTCAGATGAATGCATAAAA+TGG + chr1_3:58903224-58903243 None:intergenic 35.0%
! CCATTTTATGCATTCATCTG+AGG - chr1_3:58903221-58903240 Msa0129090:intron 35.0%
ATGAAAACGACCAAAGATGA+GGG + chr1_3:58903293-58903312 None:intergenic 35.0%
TATGAAAACGACCAAAGATG+AGG + chr1_3:58903294-58903313 None:intergenic 35.0%
AATTGTGCAGCATTCAGTAT+GGG - chr1_3:58903414-58903433 Msa0129090:CDS 35.0%
GTATGGGTTTAACATTCTAC+AGG - chr1_3:58903430-58903449 Msa0129090:CDS 35.0%
!! TTGTAGTACTGGTTTACATC+TGG - chr1_3:58903558-58903577 Msa0129090:CDS 35.0%
CATTATTCAAACCGTGAAAG+TGG + chr1_3:58903591-58903610 None:intergenic 35.0%
CACTTTCACGGTTTGAATAA+TGG - chr1_3:58903589-58903608 Msa0129090:CDS 35.0%
GAATTTGAGAAGAAACTGCT+TGG - chr1_3:58903665-58903684 Msa0129090:CDS 35.0%
GTTATTCCACCAACTGATAT+TGG - chr1_3:58903692-58903711 Msa0129090:CDS 35.0%
TATTCCACCAACTGATATTG+GGG - chr1_3:58903694-58903713 Msa0129090:CDS 35.0%
TAAGGACACCTTAAAGGAAT+TGG - chr1_3:58903751-58903770 Msa0129090:CDS 35.0%
AAGCATGACCAATTCCTTTA+AGG + chr1_3:58903762-58903781 None:intergenic 35.0%
! AATAATTCAGGCCTTTGAAG+AGG + chr1_3:58903785-58903804 None:intergenic 35.0%
!! AGGCCTGAATTATTTTGCAA+AGG - chr1_3:58903791-58903810 Msa0129090:CDS 35.0%
TTGCAAAGGACAACTAACTA+AGG - chr1_3:58903805-58903824 Msa0129090:CDS 35.0%
ATTGCAATGAGGTTCAAACA+TGG + chr1_3:58903922-58903941 None:intergenic 35.0%
AAAAGCAATATTCCCTTGCA+AGG + chr1_3:58903959-58903978 None:intergenic 35.0%
!! TGCAAGGGAATATTGCTTTT+TGG - chr1_3:58903959-58903978 Msa0129090:intron 35.0%
AAAAACAATGCTTGCAAAGG+CGG - chr1_3:58903997-58904016 Msa0129090:intron 35.0%
!! TTTTGTTTGTTGCAGTGGTT+TGG - chr1_3:58904155-58904174 Msa0129090:intron 35.0%
!!! TGTCAAAGCAGTTTTTTCTC+TGG - chr1_3:58904193-58904212 Msa0129090:CDS 35.0%
!! TTAAACATTTGAGGAGTGCT+AGG - chr1_3:58904302-58904321 Msa0129090:intron 35.0%
! CTTAACACTCACTCTTTTGT+TGG - chr1_3:58904347-58904366 Msa0129090:intron 35.0%
TATGTTTCCATGCCACATAT+GGG + chr1_3:58904600-58904619 None:intergenic 35.0%
! CTTGTTTGTGCCTCTAAAAA+GGG - chr1_3:58904679-58904698 Msa0129090:intron 35.0%
! TGGTAATCTACCCTTTTTAG+AGG + chr1_3:58904692-58904711 None:intergenic 35.0%
AGAAATCAGACATGATTCCA+GGG + chr1_3:58904891-58904910 None:intergenic 35.0%
AAGAAATCAGACATGATTCC+AGG + chr1_3:58904892-58904911 None:intergenic 35.0%
! CAACAGTCAATACTTTTGGA+AGG + chr1_3:58904918-58904937 None:intergenic 35.0%
!! TAAATTTGCAATGGGCTGTT+AGG - chr1_3:58904938-58904957 Msa0129090:intron 35.0%
! CAGAACGGATCTTTTATGTA+AGG + chr1_3:58905000-58905019 None:intergenic 35.0%
CTTACATAAAAGATCCGTTC+TGG - chr1_3:58904998-58905017 Msa0129090:intron 35.0%
TGGATTCTCTTAAACCAGAA+CGG + chr1_3:58905015-58905034 None:intergenic 35.0%
TTTATACTCACCAGTTCATG+GGG - chr1_3:58905109-58905128 Msa0129090:intron 35.0%
TAGTGATTTACATTGCGATG+GGG - chr1_3:58905150-58905169 Msa0129090:intron 35.0%
!! TCATAGTTCTAAGTCGTCAT+TGG - chr1_3:58905189-58905208 Msa0129090:intron 35.0%
!! CATAGTTCTAAGTCGTCATT+GGG - chr1_3:58905190-58905209 Msa0129090:intron 35.0%
!! ATAGTTCTAAGTCGTCATTG+GGG - chr1_3:58905191-58905210 Msa0129090:intron 35.0%
AAAAGAAAGACTAAGCTGCT+TGG - chr1_3:58905217-58905236 Msa0129090:intron 35.0%
AAAGAAAGACTAAGCTGCTT+GGG - chr1_3:58905218-58905237 Msa0129090:intron 35.0%
CATCAGCAACCATAAGAAAT+TGG + chr1_3:58905466-58905485 None:intergenic 35.0%
! ATTTTTGTGGTATTTGTGGC+AGG - chr1_3:58905517-58905536 Msa0129090:intron 35.0%
GAGTTTATGGTTAATTGGGA+TGG - chr1_3:58905605-58905624 Msa0129090:intron 35.0%
ATCTTGATGAGGCTGTTATT+AGG - chr1_3:58905687-58905706 Msa0129090:intron 35.0%
ACATAACATGTTTACCTTCG+CGG + chr1_3:58905719-58905738 None:intergenic 35.0%
!! TTTTCTCTGTTTGTTGCATC+TGG + chr1_3:58905849-58905868 None:intergenic 35.0%
GCATTAGCAAATATGACTGA+TGG - chr1_3:58905924-58905943 Msa0129090:intron 35.0%
! AATATGACTGATGGATACTC+CGG - chr1_3:58905933-58905952 Msa0129090:intron 35.0%
AGAATGTTGCACATAACTCT+AGG - chr1_3:58906012-58906031 Msa0129090:intron 35.0%
CCAAAATAAATTCTCTAGGC+AGG + chr1_3:58906386-58906405 None:intergenic 35.0%
! CCTGCCTAGAGAATTTATTT+TGG - chr1_3:58906383-58906402 Msa0129090:intron 35.0%
!!! GCCTAGAGAATTTATTTTGG+GGG - chr1_3:58906386-58906405 Msa0129090:intron 35.0%
!!! CCTAGAGAATTTATTTTGGG+GGG - chr1_3:58906387-58906406 Msa0129090:intron 35.0%
!!! CTAGAGAATTTATTTTGGGG+GGG - chr1_3:58906388-58906407 Msa0129090:intron 35.0%
ACTCCTAGAACCATTTAAAG+TGG - chr1_3:58906640-58906659 Msa0129090:intron 35.0%
ACAAAAGTAGAATGCAGAAC+TGG + chr1_3:58906737-58906756 None:intergenic 35.0%
TTAGAAAAGCAAGAGAGACT+TGG + chr1_3:58906812-58906831 None:intergenic 35.0%
! TTCACCTGAGTTCTAATAAG+AGG - chr1_3:58906839-58906858 Msa0129090:intron 35.0%
TTCTCCTCTTATTAGAACTC+AGG + chr1_3:58906846-58906865 None:intergenic 35.0%
!!! CTCTATCACTGATTTTCAGT+GGG - chr1_3:58907078-58907097 Msa0129090:intron 35.0%
TGCACAGATTCATCTATCAA+TGG + chr1_3:58907201-58907220 None:intergenic 35.0%
ACTTTGATATGCTTGCCTAA+CGG - chr1_3:58907220-58907239 Msa0129090:intron 35.0%
CATTGCATGTAAATGTTGTG+AGG + chr1_3:58907267-58907286 None:intergenic 35.0%
! TTTTAAATATGCACACGAGC+AGG - chr1_3:58907378-58907397 Msa0129090:intron 35.0%
CCAAAAGGAAGACAGTAAAT+AGG + chr1_3:58907433-58907452 None:intergenic 35.0%
! CCTATTTACTGTCTTCCTTT+TGG - chr1_3:58907430-58907449 Msa0129090:intron 35.0%
GACTCACAATTTACTCCAAA+AGG + chr1_3:58907448-58907467 None:intergenic 35.0%
TTGGAGTAAATTGTGAGTCA+TGG - chr1_3:58907449-58907468 Msa0129090:intron 35.0%
GGAATGTGAAATTCCATCAT+CGG - chr1_3:58907709-58907728 Msa0129090:intron 35.0%
AAGGAAAAAGGGAAAACCTA+TGG + chr1_3:58907756-58907775 None:intergenic 35.0%
! AGATAGAAAGATGATGGTAG+GGG + chr1_3:58907780-58907799 None:intergenic 35.0%
! GAAGATAGAAAGATGATGGT+AGG + chr1_3:58907782-58907801 None:intergenic 35.0%
! ATGGTGTCTGATTTTCCATA+CGG + chr1_3:58908106-58908125 None:intergenic 35.0%
AAAATCAGACACCATAACTG+TGG - chr1_3:58908111-58908130 Msa0129090:exon 35.0%
!!! ATGATGATGGATGGGTTTTG+AGG + chr1_3:58894421-58894440 None:intergenic 40.0%
TCAAAACCCATCCATCATCA+TGG - chr1_3:58894420-58894439 Msa0129090:three_prime_UTR 40.0%
!! GTTTCAACCATGATGATGGA+TGG + chr1_3:58894430-58894449 None:intergenic 40.0%
GAGTTTGAAGGAGATGATGA+AGG + chr1_3:58894493-58894512 None:intergenic 40.0%
ACCATCTGATCTGTCAGAAA+TGG - chr1_3:58894701-58894720 Msa0129090:three_prime_UTR 40.0%
TCCAAACGAAGATGAAGCTT+TGG - chr1_3:58894758-58894777 Msa0129090:three_prime_UTR 40.0%
ACCAAAGCTTCATCTTCGTT+TGG + chr1_3:58894762-58894781 None:intergenic 40.0%
TTGATACCTATACACTGAGG+AGG + chr1_3:58894789-58894808 None:intergenic 40.0%
CTAATTCTAAGTCAGCTTGG+GGG - chr1_3:58894991-58895010 Msa0129090:CDS 40.0%
! TGATCGTTCGCATTTTCTTG+GGG - chr1_3:58895562-58895581 Msa0129090:intron 40.0%
ACTCATCACCACTACATCAA+GGG + chr1_3:58895633-58895652 None:intergenic 40.0%
CACCAATTCAAACTTACCCT+AGG - chr1_3:58895803-58895822 Msa0129090:intron 40.0%
CTCCTAGGGTAAGTTTGAAT+TGG + chr1_3:58895808-58895827 None:intergenic 40.0%
!! GAATTCAACGTTGACTCCTA+GGG + chr1_3:58895822-58895841 None:intergenic 40.0%
! TAGTTTGAAGTGAAGGTGCA+AGG + chr1_3:58896060-58896079 None:intergenic 40.0%
CTAGAAACTTAGTGGTGTGT+TGG + chr1_3:58896251-58896270 None:intergenic 40.0%
CAACACACCACTAAGTTTCT+AGG - chr1_3:58896249-58896268 Msa0129090:intron 40.0%
! ACACACCACTAAGTTTCTAG+GGG - chr1_3:58896251-58896270 Msa0129090:intron 40.0%
TTTGACCCCTAGAAACTTAG+TGG + chr1_3:58896259-58896278 None:intergenic 40.0%
GCACACATCATCATCTTCAA+TGG - chr1_3:58896363-58896382 Msa0129090:intron 40.0%
!!! TACTTGCTTTTTTGGGGGAT+TGG - chr1_3:58896649-58896668 Msa0129090:CDS 40.0%
!!! ACTTGCTTTTTTGGGGGATT+GGG - chr1_3:58896650-58896669 Msa0129090:CDS 40.0%
! GGGGTTAATGTTGTAGCTTT+TGG - chr1_3:58896673-58896692 Msa0129090:CDS 40.0%
GGGGAATATGCTGTTAATCT+CGG - chr1_3:58896847-58896866 Msa0129090:CDS 40.0%
ATACTGTTGTCCCAGATTTG+GGG + chr1_3:58896893-58896912 None:intergenic 40.0%
CTATACTGTTGTCCCAGATT+TGG + chr1_3:58896895-58896914 None:intergenic 40.0%
AGGTTGCGGTAGTATGAATT+GGG + chr1_3:58897149-58897168 None:intergenic 40.0%
TAGGTTGCGGTAGTATGAAT+TGG + chr1_3:58897150-58897169 None:intergenic 40.0%
GAACACATAAGCCTACTTAC+CGG - chr1_3:58897201-58897220 Msa0129090:intron 40.0%
!! GAAGTTGTCTTTGGTGTTTC+CGG + chr1_3:58898360-58898379 None:intergenic 40.0%
CACCTCCACTTAAAATAAGG+CGG - chr1_3:58897245-58897264 Msa0129090:intron 40.0%
ACCTCCACTTAAAATAAGGC+GGG - chr1_3:58897246-58897265 Msa0129090:intron 40.0%
TGCATTACTGGGAATCATAG+GGG + chr1_3:58897318-58897337 None:intergenic 40.0%
GTTGCATTACTGGGAATCAT+AGG + chr1_3:58897320-58897339 None:intergenic 40.0%
! GGTTCATTGGTTGCATTACT+GGG + chr1_3:58897329-58897348 None:intergenic 40.0%
! AGGTTCATTGGTTGCATTAC+TGG + chr1_3:58897330-58897349 None:intergenic 40.0%
ATGTGTAATTCTGCGCAACA+TGG + chr1_3:58897353-58897372 None:intergenic 40.0%
CGCAGAATTACACATGACAA+TGG - chr1_3:58897358-58897377 Msa0129090:intron 40.0%
ATTACACATGACAATGGTGG+TGG - chr1_3:58897364-58897383 Msa0129090:intron 40.0%
TCAGCAGAAAAAACTCCATC+CGG - chr1_3:58897407-58897426 Msa0129090:intron 40.0%
CAACATCGGTAATAACGAAC+CGG + chr1_3:58897429-58897448 None:intergenic 40.0%
GTGCAAATTGAGCCATATAG+AGG - chr1_3:58897969-58897988 Msa0129090:intron 40.0%
GAGGAAACTCTACCTCTATA+TGG + chr1_3:58897984-58898003 None:intergenic 40.0%
GTTTGTAATTCTGCACAGCA+TGG - chr1_3:58898231-58898250 Msa0129090:intron 40.0%
GTTGCATTGCTGGAAATCAT+AGG - chr1_3:58898264-58898283 Msa0129090:intron 40.0%
!! TGTGGTGCTGTGAAAGTTAA+TGG - chr1_3:58898291-58898310 Msa0129090:intron 40.0%
!! TCCCGTCATATTTTAAGTGG+AGG - chr1_3:58898333-58898352 Msa0129090:CDS 40.0%
!! GAAGTTGTCTTTGGTGTTTC+CGG - chr1_3:58898360-58898379 Msa0129090:CDS 40.0%
!! AAGTTGTCTTTGGTGTTTCC+GGG - chr1_3:58898361-58898380 Msa0129090:CDS 40.0%
!! ATCTAATGGGTTCCTTAGCA+TGG - chr1_3:58898567-58898586 Msa0129090:CDS 40.0%
! TCTAAAATGGTCACAGGAGA+AGG + chr1_3:58898641-58898660 None:intergenic 40.0%
TGTTGCTGGAGCTTCATTAT+TGG - chr1_3:58898721-58898740 Msa0129090:intron 40.0%
GTTAGAAGCAGGTGAAATCA+TGG + chr1_3:58898777-58898796 None:intergenic 40.0%
TTCTTGCTAGTGTTAGAAGC+AGG + chr1_3:58898788-58898807 None:intergenic 40.0%
!!! GTTTTTTCTGCTGAGGAAAC+TGG - chr1_3:58898911-58898930 Msa0129090:intron 40.0%
ATCTTCATTAACGGTGGTAG+AGG + chr1_3:58898945-58898964 None:intergenic 40.0%
CCAGAAAGCTTGTGCAATAA+TGG + chr1_3:58899049-58899068 None:intergenic 40.0%
CCATTATTGCACAAGCTTTC+TGG - chr1_3:58899046-58899065 Msa0129090:intron 40.0%
TGGCAACATTGCCAAGATAT+TGG - chr1_3:58899093-58899112 Msa0129090:CDS 40.0%
!! TCCTTTAAGGCTTGTTGCTT+GGG + chr1_3:58899181-58899200 None:intergenic 40.0%
!! ATCCTTTAAGGCTTGTTGCT+TGG + chr1_3:58899182-58899201 None:intergenic 40.0%
GTTGCTAATGCTATGATGCT+TGG - chr1_3:58899400-58899419 Msa0129090:intron 40.0%
CTAATGCTATGATGCTTGGT+AGG - chr1_3:58899404-58899423 Msa0129090:intron 40.0%
ACCAGATAACAATATCCGTG+GGG + chr1_3:58899589-58899608 None:intergenic 40.0%
GACCAGATAACAATATCCGT+GGG + chr1_3:58899590-58899609 None:intergenic 40.0%
ATATTGTTATCTGGTCCTGC+AGG - chr1_3:58899594-58899613 Msa0129090:intron 40.0%
ATGACAGCACTCCTAACTTA+TGG + chr1_3:58899681-58899700 None:intergenic 40.0%
ATATCAGGAGACTCTGTCAA+AGG - chr1_3:58899731-58899750 Msa0129090:intron 40.0%
!! AAGGCACTTGCAAAGCATTT+TGG - chr1_3:58899750-58899769 Msa0129090:intron 40.0%
CTTAGAAAACATACACCAGG+AGG + chr1_3:58899807-58899826 None:intergenic 40.0%
GAGAAAGCCAATAAAGACCA+TGG + chr1_3:58899918-58899937 None:intergenic 40.0%
! TTTTCAGCGAACACCATTGA+AGG - chr1_3:58900018-58900037 Msa0129090:intron 40.0%
GTTCTTTCAGTCCTTGGAAT+TGG + chr1_3:58900067-58900086 None:intergenic 40.0%
!! GTTTACCAAGAGAAGTACTC+CGG - chr1_3:58900093-58900112 Msa0129090:intron 40.0%
GTTGATGCCCAAATTATAGG+TGG - chr1_3:58900157-58900176 Msa0129090:intron 40.0%
TACATCATTTGCAGGTGATC+GGG - chr1_3:58900376-58900395 Msa0129090:intron 40.0%
GGTGATCGGGTAAAATATGT+TGG - chr1_3:58900389-58900408 Msa0129090:intron 40.0%
! AGGAAAAACTTGTGGTGATG+AGG + chr1_3:58900432-58900451 None:intergenic 40.0%
! CACCACAAGTTTTTCCTTCA+AGG - chr1_3:58900435-58900454 Msa0129090:intron 40.0%
AAAGTGCAATGACTCCAAAG+TGG + chr1_3:58900640-58900659 None:intergenic 40.0%
TCCTCATGGATGTTTCAAGA+CGG - chr1_3:58900789-58900808 Msa0129090:CDS 40.0%
CTGTCTGTTATATTGAGCAG+GGG - chr1_3:58901012-58901031 Msa0129090:CDS 40.0%
CAGATGGAAATGATCTTGGA+GGG - chr1_3:58901124-58901143 Msa0129090:intron 40.0%
TACCAGAACAAAAGAACCCA+CGG + chr1_3:58901164-58901183 None:intergenic 40.0%
TTTGTCTGCAGCCAATCATT+TGG - chr1_3:58901280-58901299 Msa0129090:intron 40.0%
!! TCCACTTTTACTCAGACTAG+AGG + chr1_3:58901464-58901483 None:intergenic 40.0%
! AATTGGTTCACATATCCACC+CGG - chr1_3:58901582-58901601 Msa0129090:intron 40.0%
ACCTTCTCTTTACGATTGTC+CGG + chr1_3:58901604-58901623 None:intergenic 40.0%
ACTTTACGAGGCTACATGAT+AGG - chr1_3:58902014-58902033 Msa0129090:intron 40.0%
GAGTTGCTTCATTACTTTGG+GGG + chr1_3:58902050-58902069 None:intergenic 40.0%
AGTTACAATACAGATGCCTC+AGG - chr1_3:58902090-58902109 Msa0129090:intron 40.0%
TTGTTACCTTGTACAGGATG+AGG - chr1_3:58902183-58902202 Msa0129090:intron 40.0%
TAGTTTCTACGTCACGTTCT+AGG + chr1_3:58902234-58902253 None:intergenic 40.0%
GATTATTTATCGGGTGCCTT+TGG - chr1_3:58902406-58902425 Msa0129090:CDS 40.0%
AAATTCCCCTTAGCCCTATA+AGG + chr1_3:58902598-58902617 None:intergenic 40.0%
TATAGGGCTAAGGGGAATTT+AGG - chr1_3:58902598-58902617 Msa0129090:intron 40.0%
! AAGTTGTTTCCAAGTCGAAG+AGG - chr1_3:58902665-58902684 Msa0129090:intron 40.0%
TATTTGTAAACTCCTCGCCT+CGG + chr1_3:58902733-58902752 None:intergenic 40.0%
TAGAAGCTTGACAATTGGCA+AGG + chr1_3:58902979-58902998 None:intergenic 40.0%
ATTCAGGTGCTCAACAAGTT+TGG - chr1_3:58903016-58903035 Msa0129090:CDS 40.0%
TGGAAAGAGTCTCAAGTTCA+GGG + chr1_3:58903051-58903070 None:intergenic 40.0%
ATGGAAAGAGTCTCAAGTTC+AGG + chr1_3:58903052-58903071 None:intergenic 40.0%
ATGTGGAGAAGATTATTGGC+TGG - chr1_3:58903187-58903206 Msa0129090:intron 40.0%
! TGTGGAGAAGATTATTGGCT+GGG - chr1_3:58903188-58903207 Msa0129090:intron 40.0%
! ATCACAGGCTTTGATTCTTC+AGG + chr1_3:58903252-58903271 None:intergenic 40.0%
CAATTGTGCAGCATTCAGTA+TGG - chr1_3:58903413-58903432 Msa0129090:CDS 40.0%
! CCTTTTTCCTCCCTATTTTG+CGG - chr1_3:58903525-58903544 Msa0129090:CDS 40.0%
TTCAAACCGTGAAAGTGGAA+AGG + chr1_3:58903586-58903605 None:intergenic 40.0%
! CATTTTCAGTAACTACGTCC+TGG + chr1_3:58903646-58903665 None:intergenic 40.0%
AATGAGACCCCAATATCAGT+TGG + chr1_3:58903704-58903723 None:intergenic 40.0%
GGGGTCTCATTCAATGATAT+TGG - chr1_3:58903713-58903732 Msa0129090:CDS 40.0%
CAAAGGACAACTAACTAAGG+TGG - chr1_3:58903808-58903827 Msa0129090:CDS 40.0%
GGGAAAAACAATGCTTGCAA+AGG - chr1_3:58903994-58904013 Msa0129090:intron 40.0%
CTTCGAAGTAATGCTAGACA+TGG + chr1_3:58904059-58904078 None:intergenic 40.0%
CATGTCTAGCATTACTTCGA+AGG - chr1_3:58904057-58904076 Msa0129090:intron 40.0%
GAAGTATAAGGGAACACCAA+TGG + chr1_3:58904117-58904136 None:intergenic 40.0%
CTAGCACTCACTCTCTTATT+GGG + chr1_3:58904409-58904428 None:intergenic 40.0%
TCTAGCACTCACTCTCTTAT+TGG + chr1_3:58904410-58904429 None:intergenic 40.0%
AGCATACACTACCCTCTAAA+TGG + chr1_3:58904540-58904559 None:intergenic 40.0%
GCATACTTATGTCCCATATG+TGG - chr1_3:58904585-58904604 Msa0129090:CDS 40.0%
GTATGTTTCCATGCCACATA+TGG + chr1_3:58904601-58904620 None:intergenic 40.0%
ATGGAAACATACAACAGCTG+AGG - chr1_3:58904609-58904628 Msa0129090:CDS 40.0%
!! CCTTTTTAGAGGCACAAACA+AGG + chr1_3:58904681-58904700 None:intergenic 40.0%
! CCTTGTTTGTGCCTCTAAAA+AGG - chr1_3:58904678-58904697 Msa0129090:intron 40.0%
ACTAACACCACTAAGATTCC+TGG + chr1_3:58904768-58904787 None:intergenic 40.0%
TTACAATACCTCAAATGCCC+TGG - chr1_3:58904871-58904890 Msa0129090:intron 40.0%
! GAGAAGTGGAAACTCTTTTG+TGG + chr1_3:58904970-58904989 None:intergenic 40.0%
TGTAAGGTAGATGAGAGAAG+TGG + chr1_3:58904984-58905003 None:intergenic 40.0%
!! ATTTTGGTCCAAAGGGTCAA+TGG - chr1_3:58905051-58905070 Msa0129090:intron 40.0%
CTTGAAAACCATTGACCCTT+TGG + chr1_3:58905062-58905081 None:intergenic 40.0%
!! AATGGTTTTCAAGCGATTGC+TGG - chr1_3:58905069-58905088 Msa0129090:intron 40.0%
!! TTTTCAAGCGATTGCTGGAT+TGG - chr1_3:58905074-58905093 Msa0129090:intron 40.0%
TTATACTCACCAGTTCATGG+GGG - chr1_3:58905110-58905129 Msa0129090:intron 40.0%
!! TAGTTCTAAGTCGTCATTGG+GGG - chr1_3:58905192-58905211 Msa0129090:intron 40.0%
ACGTCCTATAGTGTTTGTGA+AGG - chr1_3:58905272-58905291 Msa0129090:intron 40.0%
AGTGCCTTCACAAACACTAT+AGG + chr1_3:58905279-58905298 None:intergenic 40.0%
! ATGACTGAGGTGTTCAGTAA+AGG + chr1_3:58905388-58905407 None:intergenic 40.0%
!! TGGCAGGTTGATAGTATGTT+GGG - chr1_3:58905533-58905552 Msa0129090:intron 40.0%
ACAGCCTCATCAAGATCAAA+AGG + chr1_3:58905683-58905702 None:intergenic 40.0%
TTGATGAGGCTGTTATTAGG+AGG - chr1_3:58905690-58905709 Msa0129090:intron 40.0%
CATTCTCAAGCAAGCAAGAA+TGG + chr1_3:58905998-58906017 None:intergenic 40.0%
TTCTCCAAGATCTCCCTTAT+TGG + chr1_3:58906098-58906117 None:intergenic 40.0%
AATAAGGGAGATCTTGGAGA+AGG - chr1_3:58906097-58906116 Msa0129090:intron 40.0%
GATCTTGGAGAAGGAAAAGA+AGG - chr1_3:58906106-58906125 Msa0129090:intron 40.0%
AATCATGGAGACTTCAACCA+AGG + chr1_3:58906150-58906169 None:intergenic 40.0%
CCCCCCAAAATAAATTCTCT+AGG + chr1_3:58906390-58906409 None:intergenic 40.0%
!!! AGAATTTATTTTGGGGGGGA+GGG - chr1_3:58906392-58906411 Msa0129090:intron 40.0%
AGTCTTTAGTATCCCCTCTA+TGG - chr1_3:58906425-58906444 Msa0129090:intron 40.0%
TTGAGGGACATGAATGGTAA+AGG - chr1_3:58906510-58906529 Msa0129090:intron 40.0%
ATGGTAAAGGATGTTCCATC+AGG - chr1_3:58906523-58906542 Msa0129090:intron 40.0%
TGGTAAAGGATGTTCCATCA+GGG - chr1_3:58906524-58906543 Msa0129090:intron 40.0%
GCAAAGAAGCTCTCGATAAA+GGG + chr1_3:58906559-58906578 None:intergenic 40.0%
ATAAGAGGAGAAGTGAGAAG+CGG - chr1_3:58906854-58906873 Msa0129090:intron 40.0%
!!! GCTCTATCACTGATTTTCAG+TGG - chr1_3:58907077-58907096 Msa0129090:intron 40.0%
ATATGCTTGCCTAACGGTTT+AGG - chr1_3:58907226-58907245 Msa0129090:intron 40.0%
! CATCTTTAAGGGACGAATGT+CGG + chr1_3:58907353-58907372 None:intergenic 40.0%
! TTTGTTTCTTTGCGACGTGA+TGG - chr1_3:58907484-58907503 Msa0129090:intron 40.0%
ATATGACCGAACTACTCCAA+TGG - chr1_3:58907566-58907585 Msa0129090:CDS 40.0%
GTCATTCCATTGGAGTAGTT+CGG + chr1_3:58907575-58907594 None:intergenic 40.0%
! GATAGAAAGATGATGGTAGG+GGG + chr1_3:58907779-58907798 None:intergenic 40.0%
GGCAGAAGATAGAAAGATGA+TGG + chr1_3:58907786-58907805 None:intergenic 40.0%
AAGGAGAAAATCCCAGCATA+GGG + chr1_3:58907907-58907926 None:intergenic 40.0%
CATACGGAAAATACATGCAG+GGG + chr1_3:58908090-58908109 None:intergenic 40.0%
CCATACGGAAAATACATGCA+GGG + chr1_3:58908091-58908110 None:intergenic 40.0%
TCCATACGGAAAATACATGC+AGG + chr1_3:58908092-58908111 None:intergenic 40.0%
CAAGTCATCAACCACAGTTA+TGG + chr1_3:58908125-58908144 None:intergenic 40.0%
GATGATGAAGGAGAAGAGAG+AGG + chr1_3:58894481-58894500 None:intergenic 45.0%
CAACGGTGAAGGATTAACCT+TGG + chr1_3:58894652-58894671 None:intergenic 45.0%
CAAGGTTAATCCTTCACCGT+TGG - chr1_3:58894650-58894669 Msa0129090:three_prime_UTR 45.0%
TCACCAGATTCGTTGACCAA+CGG + chr1_3:58894669-58894688 None:intergenic 45.0%
GCCATTTCTGACAGATCAGA+TGG + chr1_3:58894705-58894724 None:intergenic 45.0%
CTGTCAGAAATGGCTGTTGA+TGG - chr1_3:58894711-58894730 Msa0129090:three_prime_UTR 45.0%
GATTCACTTCGCTTGGACAT+GGG - chr1_3:58895584-58895603 Msa0129090:intron 45.0%
CACTCATCACCACTACATCA+AGG + chr1_3:58895634-58895653 None:intergenic 45.0%
! CTTGATGTAGTGGTGATGAG+TGG - chr1_3:58895632-58895651 Msa0129090:intron 45.0%
TGAAATGGAATGGAGTGGGA+CGG + chr1_3:58895780-58895799 None:intergenic 45.0%
!! GGAATTCAACGTTGACTCCT+AGG + chr1_3:58895823-58895842 None:intergenic 45.0%
GTGTTGGGCCATTTGTAGTT+AGG + chr1_3:58896235-58896254 None:intergenic 45.0%
!! GTCAAAACGGGTGATGGATT+CGG + chr1_3:58896317-58896336 None:intergenic 45.0%
CATTAGGTCAAAACGGGTGA+TGG + chr1_3:58896323-58896342 None:intergenic 45.0%
TGTAAGAGCCACATCAACCA+AGG + chr1_3:58896475-58896494 None:intergenic 45.0%
!!! CTTGCTTTTTTGGGGGATTG+GGG - chr1_3:58896651-58896670 Msa0129090:CDS 45.0%
!!! TTGCTTTTTTGGGGGATTGG+GGG - chr1_3:58896652-58896671 Msa0129090:CDS 45.0%
CCAGATGGACCTGTTTAAGA+GGG - chr1_3:58896804-58896823 Msa0129090:intron 45.0%
! AGAGCATCAACCCCAAATCT+GGG - chr1_3:58896880-58896899 Msa0129090:CDS 45.0%
ACAACAGTATAGCATGCTGC+AGG - chr1_3:58896903-58896922 Msa0129090:CDS 45.0%
ATCTAGGCAAAGACCCAAAG+AGG - chr1_3:58897029-58897048 Msa0129090:intron 45.0%
TCTAGGCAAAGACCCAAAGA+GGG - chr1_3:58897030-58897049 Msa0129090:intron 45.0%
AAGAGACTTAGGCCCATCAT+TGG - chr1_3:58897069-58897088 Msa0129090:intron 45.0%
! GTTTGGCACATTGGGCTTTT+TGG + chr1_3:58897100-58897119 None:intergenic 45.0%
GATGTAAAACAGCGGCAAGT+AGG + chr1_3:58897169-58897188 None:intergenic 45.0%
!! CTTTGGTGTTTCCGGTAAGT+AGG + chr1_3:58897215-58897234 None:intergenic 45.0%
GGAGGTGATGAAGTTGTCTT+TGG + chr1_3:58898351-58898370 None:intergenic 45.0%
!!! TCCCGCCTTATTTTAAGTGG+AGG + chr1_3:58897250-58897269 None:intergenic 45.0%
TGTAATTCTGCGCAACATGG+AGG + chr1_3:58897350-58897369 None:intergenic 45.0%
!!! GGATGGAGTTTTTTCTGCTG+AGG + chr1_3:58897408-58897427 None:intergenic 45.0%
ATCGGTAATAACGAACCGGA+TGG + chr1_3:58897425-58897444 None:intergenic 45.0%
TTCTTGCCAGTGTTAGCAGA+AGG - chr1_3:58897518-58897537 Msa0129090:intron 45.0%
ATTCCACCTTCTGCTAACAC+TGG + chr1_3:58897527-58897546 None:intergenic 45.0%
TCGAAGAATGATGCCAGATC+TGG + chr1_3:58897620-58897639 None:intergenic 45.0%
GTGTAGATAGGATCGCACAT+GGG + chr1_3:58897889-58897908 None:intergenic 45.0%
AGTGTAGATAGGATCGCACA+TGG + chr1_3:58897890-58897909 None:intergenic 45.0%
TGCGATCCTATCTACACTGT+TGG - chr1_3:58897892-58897911 Msa0129090:intron 45.0%
CATTGGCCAACAGTGTAGAT+AGG + chr1_3:58897901-58897920 None:intergenic 45.0%
TGTAATTCTGCACAGCATGG+AGG - chr1_3:58898234-58898253 Msa0129090:intron 45.0%
AGGTTCATCTGTTGCATTGC+TGG - chr1_3:58898254-58898273 Msa0129090:intron 45.0%
CTGGAAATCATAGGGAGTTG+TGG - chr1_3:58898273-58898292 Msa0129090:intron 45.0%
GGAGGTGATGAAGTTGTCTT+TGG - chr1_3:58898351-58898370 Msa0129090:CDS 45.0%
! GGTCACAGGAGAAGGTATAT+TGG + chr1_3:58898633-58898652 None:intergenic 45.0%
!! TGGGCTTCTAAAATGGTCAC+AGG + chr1_3:58898647-58898666 None:intergenic 45.0%
!! TGTGACCATTTTAGAAGCCC+AGG - chr1_3:58898646-58898665 Msa0129090:intron 45.0%
!! GTGACCATTTTAGAAGCCCA+GGG - chr1_3:58898647-58898666 Msa0129090:intron 45.0%
! TCCAGTTATTGAAGCACCCT+GGG + chr1_3:58898666-58898685 None:intergenic 45.0%
! TTCCAGTTATTGAAGCACCC+TGG + chr1_3:58898667-58898686 None:intergenic 45.0%
ACGCAACTTGATGCAAGATC+TGG - chr1_3:58898686-58898705 Msa0129090:intron 45.0%
TCATTAACGGTGGTAGAGGA+CGG + chr1_3:58898941-58898960 None:intergenic 45.0%
GTTGCTGTAGAAGTCAATGC+TGG - chr1_3:58898974-58898993 Msa0129090:intron 45.0%
TGTAGAAGTCAATGCTGGTG+TGG - chr1_3:58898979-58898998 Msa0129090:intron 45.0%
TGGGCGATGTCAATAGTGTT+GGG + chr1_3:58899162-58899181 None:intergenic 45.0%
TTGGGCGATGTCAATAGTGT+TGG + chr1_3:58899163-58899182 None:intergenic 45.0%
! CATTTGAAGTGCAATGGCTC+TGG - chr1_3:58899534-58899553 Msa0129090:intron 45.0%
TCCCCACGGATATTGTTATC+TGG - chr1_3:58899585-58899604 Msa0129090:intron 45.0%
GGACCAGATAACAATATCCG+TGG + chr1_3:58899591-58899610 None:intergenic 45.0%
!!! TTGCAAAGCATTTTGGAGCG+TGG - chr1_3:58899757-58899776 Msa0129090:intron 45.0%
! TGGATCCACATCTAGTTCAC+AGG - chr1_3:58900177-58900196 Msa0129090:intron 45.0%
TACAGCCTGTGAACTAGATG+TGG + chr1_3:58900185-58900204 None:intergenic 45.0%
GCTGTAACATCTGCAGATGA+GGG + chr1_3:58900605-58900624 None:intergenic 45.0%
AGCTGTAACATCTGCAGATG+AGG + chr1_3:58900606-58900625 None:intergenic 45.0%
ACCGTCTTGAAACATCCATG+AGG + chr1_3:58900793-58900812 None:intergenic 45.0%
CCTCCAAGATCATTTCCATC+TGG + chr1_3:58901126-58901145 None:intergenic 45.0%
CCAGATGGAAATGATCTTGG+AGG - chr1_3:58901123-58901142 Msa0129090:intron 45.0%
TGCAGCCAATCATTTGGTAC+TGG - chr1_3:58901286-58901305 Msa0129090:intron 45.0%
!! TTGGTACTGGTAGATGGTTG+TGG - chr1_3:58901299-58901318 Msa0129090:intron 45.0%
TACTGGTAGATGGTTGTGGA+GGG - chr1_3:58901303-58901322 Msa0129090:intron 45.0%
GCCTCTAGTCTGAGTAAAAG+TGG - chr1_3:58901460-58901479 Msa0129090:CDS 45.0%
! ATATAGAGAAGGGTGTGGCT+GGG - chr1_3:58901506-58901525 Msa0129090:CDS 45.0%
CCTTCTCTTTACGATTGTCC+GGG + chr1_3:58901603-58901622 None:intergenic 45.0%
TTATACTTCCAGACCCAACC+TGG - chr1_3:58901717-58901736 Msa0129090:intron 45.0%
TTTGTAAACAGAAGGCTGCC+AGG + chr1_3:58901738-58901757 None:intergenic 45.0%
GTAAAGCCTCATCCTGTACA+AGG + chr1_3:58902192-58902211 None:intergenic 45.0%
TGTGACACGACACATTCCAA+AGG + chr1_3:58902425-58902444 None:intergenic 45.0%
TCCAAGTCGAAGAGGAAATG+AGG - chr1_3:58902673-58902692 Msa0129090:intron 45.0%
CCAAGTCGAAGAGGAAATGA+GGG - chr1_3:58902674-58902693 Msa0129090:intron 45.0%
TTGGAAGGACTTCTAGTGAC+AGG + chr1_3:58902787-58902806 None:intergenic 45.0%
!! TTGTAGGACTCAAGGGTGTT+GGG + chr1_3:58902839-58902858 None:intergenic 45.0%
! ATTGTAGGACTCAAGGGTGT+TGG + chr1_3:58902840-58902859 None:intergenic 45.0%
AACCTCTCTGCAGATATCAC+AGG + chr1_3:58903267-58903286 None:intergenic 45.0%
AGAGGTTGTTCCCTCATCTT+TGG - chr1_3:58903280-58903299 Msa0129090:intron 45.0%
CCGCAAAATAGGGAGGAAAA+AGG + chr1_3:58903528-58903547 None:intergenic 45.0%
ATGTACTCCGCAAAATAGGG+AGG + chr1_3:58903535-58903554 None:intergenic 45.0%
TGGTCATGCTTCCTCTTCAA+AGG - chr1_3:58903771-58903790 Msa0129090:CDS 45.0%
!! TTGTTGCAGTGGTTTGGTGA+AGG - chr1_3:58904161-58904180 Msa0129090:intron 45.0%
! AACGCTTGGAGCAATTTTGC+TGG + chr1_3:58904219-58904238 None:intergenic 45.0%
CTTATGTCCCATATGTGGCA+TGG - chr1_3:58904590-58904609 Msa0129090:CDS 45.0%
GAAACATACAACAGCTGAGG+AGG - chr1_3:58904612-58904631 Msa0129090:CDS 45.0%
! ACATGATTCCAGGGCATTTG+AGG + chr1_3:58904882-58904901 None:intergenic 45.0%
TATACTCACCAGTTCATGGG+GGG - chr1_3:58905111-58905130 Msa0129090:intron 45.0%
!! TTGTGAAGGCACTGATACAG+TGG - chr1_3:58905286-58905305 Msa0129090:intron 45.0%
!! TGTGAAGGCACTGATACAGT+GGG - chr1_3:58905287-58905306 Msa0129090:intron 45.0%
!! ATACAGTGGGTTGAAGAACC+AGG - chr1_3:58905300-58905319 Msa0129090:intron 45.0%
!! TACAGTGGGTTGAAGAACCA+GGG - chr1_3:58905301-58905320 Msa0129090:intron 45.0%
TCACTACAATTCACAACCCC+TGG + chr1_3:58905321-58905340 None:intergenic 45.0%
!! GTGGCAGGTTGATAGTATGT+TGG - chr1_3:58905532-58905551 Msa0129090:intron 45.0%
!! GGCAGGTTGATAGTATGTTG+GGG - chr1_3:58905534-58905553 Msa0129090:intron 45.0%
AAGATCAAAAGGCCTGTTCG+TGG + chr1_3:58905672-58905691 None:intergenic 45.0%
! CAGGCCTTTTGATCTTGATG+AGG - chr1_3:58905676-58905695 Msa0129090:intron 45.0%
ATACTCCGGAAGTGACCTAA+AGG - chr1_3:58905947-58905966 Msa0129090:intron 45.0%
CACAACCTTTAGGTCACTTC+CGG + chr1_3:58905955-58905974 None:intergenic 45.0%
CTGTCCAATAAGGGAGATCT+TGG - chr1_3:58906091-58906110 Msa0129090:intron 45.0%
! TTTTGTCTTGGCTGCTCTCA+AGG - chr1_3:58906181-58906200 Msa0129090:intron 45.0%
!!! GAGAATTTATTTTGGGGGGG+AGG - chr1_3:58906391-58906410 Msa0129090:intron 45.0%
!!! GAATTTATTTTGGGGGGGAG+GGG - chr1_3:58906393-58906412 Msa0129090:intron 45.0%
!!! AATTTATTTTGGGGGGGAGG+GGG - chr1_3:58906394-58906413 Msa0129090:intron 45.0%
GGTAAAGGATGTTCCATCAG+GGG - chr1_3:58906525-58906544 Msa0129090:intron 45.0%
GTAAAGGATGTTCCATCAGG+GGG - chr1_3:58906526-58906545 Msa0129090:intron 45.0%
CGCAAAGAAGCTCTCGATAA+AGG + chr1_3:58906560-58906579 None:intergenic 45.0%
ATTTCCCGACCGAGTAATCT+AGG - chr1_3:58906581-58906600 Msa0129090:intron 45.0%
ACAAGCCTAGATTACTCGGT+CGG + chr1_3:58906589-58906608 None:intergenic 45.0%
ACCGAGTAATCTAGGCTTGT+GGG - chr1_3:58906589-58906608 Msa0129090:intron 45.0%
TCCCACAAGCCTAGATTACT+CGG + chr1_3:58906593-58906612 None:intergenic 45.0%
TTACAGTCCCTGAGCTCATT+TGG - chr1_3:58906989-58907008 Msa0129090:intron 45.0%
TTGACCTCCAAATGAGCTCA+GGG + chr1_3:58906999-58907018 None:intergenic 45.0%
!!! TCACTGATTTTCAGTGGGAC+TGG - chr1_3:58907083-58907102 Msa0129090:intron 45.0%
GTTGTGAGGAAGAGATCACT+GGG + chr1_3:58907253-58907272 None:intergenic 45.0%
TGTTGTGAGGAAGAGATCAC+TGG + chr1_3:58907254-58907273 None:intergenic 45.0%
CGACATTCGTCCCTTAAAGA+TGG - chr1_3:58907351-58907370 Msa0129090:intron 45.0%
CTCCAATGGAATGACCTCTA+TGG - chr1_3:58907580-58907599 Msa0129090:CDS 45.0%
CTCCATAGAGGTCATTCCAT+TGG + chr1_3:58907585-58907604 None:intergenic 45.0%
TGGAATGACCTCTATGGAGA+AGG - chr1_3:58907586-58907605 Msa0129090:CDS 45.0%
AATGACCTCTATGGAGAAGG+TGG - chr1_3:58907589-58907608 Msa0129090:CDS 45.0%
TTGATCCACCTTCTCCATAG+AGG + chr1_3:58907597-58907616 None:intergenic 45.0%
CATTCCTTGTGACGCAGTTT+AGG + chr1_3:58907695-58907714 None:intergenic 45.0%
AATAAAGGAAGGGCCGATGA+TGG + chr1_3:58907725-58907744 None:intergenic 45.0%
ATGGTAGGGGGAAGGAAAAA+GGG + chr1_3:58907767-58907786 None:intergenic 45.0%
CAAGGAGAAAATCCCAGCAT+AGG + chr1_3:58907908-58907927 None:intergenic 45.0%
! CCCTGCATGTATTTTCCGTA+TGG - chr1_3:58908088-58908107 Msa0129090:CDS 45.0%
!!! AAATACAATATTTTATTTAA+GGG - chr1_3:58896827-58896846 Msa0129090:intron 5.0%
!! GAAAAAAAAAAAAAAAAAAA+GGG + chr1_3:58897799-58897818 None:intergenic 5.0%
!! TGAAAAAAAAAAAAAAAAAA+AGG + chr1_3:58897800-58897819 None:intergenic 5.0%
!!! AATTTCATAAATTTATTTTA+TGG - chr1_3:58908030-58908049 Msa0129090:intron 5.0%
GAGAGGACGTTTGGAAGAAG+AGG + chr1_3:58894464-58894483 None:intergenic 50.0%
AGGAGAAGAGAGAGGACGTT+TGG + chr1_3:58894473-58894492 None:intergenic 50.0%
GATTCGTTGACCAACGGTGA+AGG + chr1_3:58894663-58894682 None:intergenic 50.0%
TCACCGTTGGTCAACGAATC+TGG - chr1_3:58894663-58894682 Msa0129090:three_prime_UTR 50.0%
GTGTCTCCTCCTCAGTGTAT+AGG - chr1_3:58894780-58894799 Msa0129090:three_prime_UTR 50.0%
! AGGTGTTACCTCCGTTAGCT+CGG - chr1_3:58894946-58894965 Msa0129090:CDS 50.0%
CGTTTCTTCGACCGAGCTAA+CGG + chr1_3:58894960-58894979 None:intergenic 50.0%
TCTTGGGGATTCACTTCGCT+TGG - chr1_3:58895577-58895596 Msa0129090:intron 50.0%
GGATTCACTTCGCTTGGACA+TGG - chr1_3:58895583-58895602 Msa0129090:intron 50.0%
! GGTGCAAGGAGTACAAGCAA+AGG + chr1_3:58896046-58896065 None:intergenic 50.0%
! ACCAAGGCGTTCACAAACGA+GGG + chr1_3:58896459-58896478 None:intergenic 50.0%
! AACCAAGGCGTTCACAAACG+AGG + chr1_3:58896460-58896479 None:intergenic 50.0%
! TGTGAACGCCTTGGTTGATG+TGG - chr1_3:58896464-58896483 Msa0129090:CDS 50.0%
!!! TGCTTTTTTGGGGGATTGGG+GGG - chr1_3:58896653-58896672 Msa0129090:CDS 50.0%
GCCAGATGGACCTGTTTAAG+AGG - chr1_3:58896803-58896822 Msa0129090:intron 50.0%
CCCTCTTAAACAGGTCCATC+TGG + chr1_3:58896807-58896826 None:intergenic 50.0%
! CAGAGCATCAACCCCAAATC+TGG - chr1_3:58896879-58896898 Msa0129090:CDS 50.0%
AAACAGCGGCAAGTAGGTTG+CGG + chr1_3:58897163-58897182 None:intergenic 50.0%
TGCGCAACATGGAGGTTCAT+TGG + chr1_3:58897342-58897361 None:intergenic 50.0%
!! ACACATGACAATGGTGGTGG+AGG - chr1_3:58897367-58897386 Msa0129090:intron 50.0%
!! ATGACAATGGTGGTGGAGGA+TGG - chr1_3:58897371-58897390 Msa0129090:intron 50.0%
AGTGTTTCATCACTGCCTGG+CGG + chr1_3:58897488-58897507 None:intergenic 50.0%
! CAGAGTGTTTCATCACTGCC+TGG + chr1_3:58897491-58897510 None:intergenic 50.0%
TTGCCAGTGTTAGCAGAAGG+TGG - chr1_3:58897521-58897540 Msa0129090:intron 50.0%
AATCTCCAGCAATAGCCGAC+AGG - chr1_3:58897591-58897610 Msa0129090:intron 50.0%
GGATACATAAGCCTGCTTCC+CGG + chr1_3:58898382-58898401 None:intergenic 50.0%
! AGCACCCTGGGCTTCTAAAA+TGG + chr1_3:58898654-58898673 None:intergenic 50.0%
TCATCACTACCTGCCAGCAA+TGG - chr1_3:58898830-58898849 Msa0129090:CDS 50.0%
CATCACTACCTGCCAGCAAT+GGG - chr1_3:58898831-58898850 Msa0129090:CDS 50.0%
ATCACTACCTGCCAGCAATG+GGG - chr1_3:58898832-58898851 Msa0129090:CDS 50.0%
TTATCATCCCCATTGCTGGC+AGG + chr1_3:58898842-58898861 None:intergenic 50.0%
TGCCAGCAATGGGGATGATA+AGG - chr1_3:58898841-58898860 Msa0129090:CDS 50.0%
TGCCTTATCATCCCCATTGC+TGG + chr1_3:58897466-58897485 None:intergenic 50.0%
CTGGTGTGGATGCAGATGTT+GGG - chr1_3:58898993-58899012 Msa0129090:intron 50.0%
GGGCGATGTCAATAGTGTTG+GGG + chr1_3:58899161-58899180 None:intergenic 50.0%
GCCCAAGCAACAAGCCTTAA+AGG - chr1_3:58899177-58899196 Msa0129090:intron 50.0%
TGGAGCGTGGCTACTAATTG+TGG - chr1_3:58899770-58899789 Msa0129090:intron 50.0%
GTGGATTCTCTTTCACCTCC+TGG - chr1_3:58899789-58899808 Msa0129090:intron 50.0%
TGGGCATCAACACTAGAAGC+TGG + chr1_3:58900148-58900167 None:intergenic 50.0%
CGACTCTCGTGAATTCCTCA+TGG - chr1_3:58900775-58900794 Msa0129090:CDS 50.0%
TTGAGCAGGGGACCAAGTTA+TGG - chr1_3:58901024-58901043 Msa0129090:CDS 50.0%
AAGCAAGGAGAACTTTGCCC+CGG + chr1_3:58901053-58901072 None:intergenic 50.0%
! GACCGTGGGTTCTTTTGTTC+TGG - chr1_3:58901159-58901178 Msa0129090:intron 50.0%
! GTACTGGTAGATGGTTGTGG+AGG - chr1_3:58901302-58901321 Msa0129090:intron 50.0%
ACTGGTAGATGGTTGTGGAG+GGG - chr1_3:58901304-58901323 Msa0129090:intron 50.0%
! GATATAGAGAAGGGTGTGGC+TGG - chr1_3:58901505-58901524 Msa0129090:CDS 50.0%
TCTCTTTACGATTGTCCGGG+TGG + chr1_3:58901600-58901619 None:intergenic 50.0%
CCCGGACAATCGTAAAGAGA+AGG - chr1_3:58901600-58901619 Msa0129090:intron 50.0%
AAACAGAAGGCTGCCAGGTT+GGG + chr1_3:58901733-58901752 None:intergenic 50.0%
TAAACAGAAGGCTGCCAGGT+TGG + chr1_3:58901734-58901753 None:intergenic 50.0%
CAAGCGAATGCTGACAACGT+TGG + chr1_3:58902269-58902288 None:intergenic 50.0%
CAACGTTGTCAGCATTCGCT+TGG - chr1_3:58902267-58902286 Msa0129090:intron 50.0%
CCCTCATTTCCTCTTCGACT+TGG + chr1_3:58902677-58902696 None:intergenic 50.0%
CTATATGCTATACCGAGGCG+AGG - chr1_3:58902718-58902737 Msa0129090:intron 50.0%
GGTGCTCAACAAGTTTGGAC+TGG - chr1_3:58903021-58903040 Msa0129090:CDS 50.0%
AGCCTGTGATATCTGCAGAG+AGG - chr1_3:58903262-58903281 Msa0129090:intron 50.0%
CTGGCTCCTTTCCACTTTCA+CGG - chr1_3:58903577-58903596 Msa0129090:CDS 50.0%
GAGACCCCAATATCAGTTGG+TGG + chr1_3:58903701-58903720 None:intergenic 50.0%
!!! ATATTGCTTTTTGGCCCCCC+TGG - chr1_3:58903968-58903987 Msa0129090:intron 50.0%
!! ATTGTTTTTCCCGTGCCAGG+GGG + chr1_3:58903986-58904005 None:intergenic 50.0%
!! CATTGTTTTTCCCGTGCCAG+GGG + chr1_3:58903987-58904006 None:intergenic 50.0%
!! GCATTGTTTTTCCCGTGCCA+GGG + chr1_3:58903988-58904007 None:intergenic 50.0%
!! AGCATTGTTTTTCCCGTGCC+AGG + chr1_3:58903989-58904008 None:intergenic 50.0%
! GTACTTTTCCCCCCATGAAC+TGG + chr1_3:58905122-58905141 None:intergenic 50.0%
GCGATGGGGACAATTGTAGT+AGG - chr1_3:58905164-58905183 Msa0129090:intron 50.0%
GTTGTGAAGCTGCAGGATAG+TGG - chr1_3:58905242-58905261 Msa0129090:intron 50.0%
!! ACAGTGGGTTGAAGAACCAG+GGG - chr1_3:58905302-58905321 Msa0129090:intron 50.0%
TTGGGGAGACGTGAAAATCC+TGG - chr1_3:58905551-58905570 Msa0129090:intron 50.0%
TGAAAATCCTGGTGAGCACG+AGG - chr1_3:58905562-58905581 Msa0129090:intron 50.0%
TTGTTCTTGCTGCCACGAAC+AGG - chr1_3:58905657-58905676 Msa0129090:intron 50.0%
TTATTAGGAGGCTTCCGCGA+AGG - chr1_3:58905702-58905721 Msa0129090:intron 50.0%
TGCAGCGCACTGTCCAATAA+GGG - chr1_3:58906082-58906101 Msa0129090:intron 50.0%
TAGTATCCCCTCTATGGCTC+AGG - chr1_3:58906431-58906450 Msa0129090:intron 50.0%
AGTATCCCCTCTATGGCTCA+GGG - chr1_3:58906432-58906451 Msa0129090:intron 50.0%
GAGGGATTGAGGGACATGAA+TGG - chr1_3:58906504-58906523 Msa0129090:intron 50.0%
CAAGCCTAGATTACTCGGTC+GGG + chr1_3:58906588-58906607 None:intergenic 50.0%
GACCGAGTAATCTAGGCTTG+TGG - chr1_3:58906588-58906607 Msa0129090:intron 50.0%
TCTAGGCTTGTGGGATACCT+TGG - chr1_3:58906598-58906617 Msa0129090:intron 50.0%
GTTGACCTCCAAATGAGCTC+AGG + chr1_3:58907000-58907019 None:intergenic 50.0%
TCACTGGGTCCTAAACCGTT+AGG + chr1_3:58907238-58907257 None:intergenic 50.0%
TCAGGAGAGAACCTCTGCAT+TGG - chr1_3:58907291-58907310 Msa0129090:intron 50.0%
CTTGTTCTCAGCCAATGCAG+AGG + chr1_3:58907305-58907324 None:intergenic 50.0%
GCTGAGAACAAGCCTTTACC+TGG - chr1_3:58907313-58907332 Msa0129090:intron 50.0%
CTGCTACAGAGTCCAGGTAA+AGG + chr1_3:58907328-58907347 None:intergenic 50.0%
GGTGTGTGCAAGTGTGTCAT+CGG - chr1_3:58907534-58907553 Msa0129090:CDS 50.0%
ATCGCCTAAACTGCGTCACA+AGG - chr1_3:58907688-58907707 Msa0129090:intron 50.0%
GATGGTAGGGGGAAGGAAAA+AGG + chr1_3:58907768-58907787 None:intergenic 50.0%
! GAAAGATGATGGTAGGGGGA+AGG + chr1_3:58907775-58907794 None:intergenic 50.0%
AGGGAAGAGTTGGATCAGCA+GGG + chr1_3:58907857-58907876 None:intergenic 50.0%
AAGGGAAGAGTTGGATCAGC+AGG + chr1_3:58907858-58907877 None:intergenic 50.0%
AGAAAATCCCAGCATAGGGC+AGG + chr1_3:58907903-58907922 None:intergenic 50.0%
GGAAAATACATGCAGGGGAG+GGG + chr1_3:58908085-58908104 None:intergenic 50.0%
CGGAAAATACATGCAGGGGA+GGG + chr1_3:58908086-58908105 None:intergenic 50.0%
ACGGAAAATACATGCAGGGG+AGG + chr1_3:58908087-58908106 None:intergenic 50.0%
TTCTTCGACCGAGCTAACGG+AGG + chr1_3:58894957-58894976 None:intergenic 55.0%
ACCCTCGTTTGTGAACGCCT+TGG - chr1_3:58896455-58896474 Msa0129090:CDS 55.0%
!!! GCTTTTTTGGGGGATTGGGG+GGG - chr1_3:58896654-58896673 Msa0129090:CDS 55.0%
TGGCGGCAATGGGGATGATA+AGG + chr1_3:58897471-58897490 None:intergenic 55.0%
TTATCATCCCCATTGCCGCC+AGG - chr1_3:58897470-58897489 Msa0129090:intron 55.0%
TGCCAGATCTGGAGACCTGT+CGG + chr1_3:58897609-58897628 None:intergenic 55.0%
ACATGGGCAGGTGAGGATTC+TGG + chr1_3:58897873-58897892 None:intergenic 55.0%
AGATAGGATCGCACATGGGC+AGG + chr1_3:58897885-58897904 None:intergenic 55.0%
!! CTTTGGTGTTTCCGGGAAGC+AGG - chr1_3:58898368-58898387 Msa0129090:CDS 55.0%
! GCCCAGGGTGCTTCAATAAC+TGG - chr1_3:58898662-58898681 Msa0129090:intron 55.0%
AAGCTCCAGCAACAGACGAC+AGG + chr1_3:58898715-58898734 None:intergenic 55.0%
GCTGGTGTGGATGCAGATGT+TGG - chr1_3:58898992-58899011 Msa0129090:intron 55.0%
AATATCCGTGGGGACAGCGA+CGG + chr1_3:58899579-58899598 None:intergenic 55.0%
! AGCAGCCGGAGTACTTCTCT+TGG + chr1_3:58900101-58900120 None:intergenic 55.0%
! GTGGTGATGAGGCAGCAGAA+GGG + chr1_3:58900421-58900440 None:intergenic 55.0%
! TGTGGTGATGAGGCAGCAGA+AGG + chr1_3:58900422-58900441 None:intergenic 55.0%
!! TTGTTTTTCCCGTGCCAGGG+GGG + chr1_3:58903985-58904004 None:intergenic 55.0%
AAGGCGGTAGCAACTGAAGC+TGG - chr1_3:58904013-58904032 Msa0129090:intron 55.0%
CTGGCTGTGCGTTCTTGATC+AGG + chr1_3:58904749-58904768 None:intergenic 55.0%
CTGATCAAGAACGCACAGCC+AGG - chr1_3:58904747-58904766 Msa0129090:intron 55.0%
CGCACAGCCAGGAATCTTAG+TGG - chr1_3:58904758-58904777 Msa0129090:intron 55.0%
CTTGGGAGTTGTGAAGCTGC+AGG - chr1_3:58905235-58905254 Msa0129090:intron 55.0%
! GTGAAGCTGCAGGATAGTGG+TGG - chr1_3:58905245-58905264 Msa0129090:intron 55.0%
CTGCAGCGCACTGTCCAATA+AGG - chr1_3:58906081-58906100 Msa0129090:intron 55.0%
TTGGGCACCACACTAGAAGG+GGG + chr1_3:58906461-58906480 None:intergenic 55.0%
CTTGGGCACCACACTAGAAG+GGG + chr1_3:58906462-58906481 None:intergenic 55.0%
CCTTGGGCACCACACTAGAA+GGG + chr1_3:58906463-58906482 None:intergenic 55.0%
CCTTCTAGTGTGGTGCCCAA+GGG - chr1_3:58906461-58906480 Msa0129090:intron 55.0%
GCAGCTCAAGGAGGGATTGA+GGG - chr1_3:58906494-58906513 Msa0129090:intron 55.0%
AAGGGTTCAACACCCCCTGA+TGG + chr1_3:58906541-58906560 None:intergenic 55.0%
CAGTCCCTGAGCTCATTTGG+AGG - chr1_3:58906992-58907011 Msa0129090:intron 55.0%
CCTCAATGACAGGGGGAGAA+GGG + chr1_3:58907876-58907895 None:intergenic 55.0%
CCTTCTCCCCCTGTCATTGA+GGG - chr1_3:58907874-58907893 Msa0129090:CDS 55.0%
CTTCTCCCCCTGTCATTGAG+GGG - chr1_3:58907875-58907894 Msa0129090:CDS 55.0%
TGGAATGGAGTGGGACGGAG+TGG + chr1_3:58895775-58895794 None:intergenic 60.0%
ATCACTGCCTGGCGGCAATG+GGG + chr1_3:58897480-58897499 None:intergenic 60.0%
CATCACTGCCTGGCGGCAAT+GGG + chr1_3:58897481-58897500 None:intergenic 60.0%
TCATCACTGCCTGGCGGCAA+TGG + chr1_3:58897482-58897501 None:intergenic 60.0%
! GGAGACCTGTCGGCTATTGC+TGG + chr1_3:58897599-58897618 None:intergenic 60.0%
AGCCGACAGGTCTCCAGATC+TGG - chr1_3:58897604-58897623 Msa0129090:intron 60.0%
GGAGACCTGTCGTCTGTTGC+TGG - chr1_3:58898707-58898726 Msa0129090:intron 60.0%
AACTTCCGTCGCTGTCCCCA+CGG - chr1_3:58899571-58899590 Msa0129090:intron 60.0%
! AGAATGACGGGGCTACCTGC+AGG + chr1_3:58899612-58899631 None:intergenic 60.0%
GGGGACCAAGTTATGGCTGC+CGG - chr1_3:58901031-58901050 Msa0129090:CDS 60.0%
GGGACCAAGTTATGGCTGCC+GGG - chr1_3:58901032-58901051 Msa0129090:CDS 60.0%
GGACCAAGTTATGGCTGCCG+GGG - chr1_3:58901033-58901052 Msa0129090:CDS 60.0%
TTGCCCCGGCAGCCATAACT+TGG + chr1_3:58901039-58901058 None:intergenic 60.0%
GGCTCTGCGAAGATGACCGT+GGG - chr1_3:58901145-58901164 Msa0129090:intron 60.0%
GGTTGTGGAGGGGATGACTC+TGG - chr1_3:58901314-58901333 Msa0129090:intron 60.0%
GGCTACCCTGAGCCATAGAG+GGG + chr1_3:58906440-58906459 None:intergenic 60.0%
GGGCTACCCTGAGCCATAGA+GGG + chr1_3:58906441-58906460 None:intergenic 60.0%
AGGGTAGCCCCCTTCTAGTG+TGG - chr1_3:58906451-58906470 Msa0129090:intron 60.0%
CCCTTCTAGTGTGGTGCCCA+AGG - chr1_3:58906460-58906479 Msa0129090:intron 60.0%
CCCTTGGGCACCACACTAGA+AGG + chr1_3:58906464-58906483 None:intergenic 60.0%
CAATCCCTCCTTGAGCTGCC+TGG + chr1_3:58906493-58906512 None:intergenic 60.0%
GGCAGCTCAAGGAGGGATTG+AGG - chr1_3:58906493-58906512 Msa0129090:intron 60.0%
TCGGCACTGCTACAGAGTCC+AGG + chr1_3:58907334-58907353 None:intergenic 60.0%
CAGGGGGAGAAGGGAAGAGT+TGG + chr1_3:58907867-58907886 None:intergenic 60.0%
CCCTTCTCCCCCTGTCATTG+AGG - chr1_3:58907873-58907892 Msa0129090:CDS 60.0%
CCCTCAATGACAGGGGGAGA+AGG + chr1_3:58907877-58907896 None:intergenic 60.0%
AGGCACCCCTCAATGACAGG+GGG + chr1_3:58907883-58907902 None:intergenic 60.0%
CAGGCACCCCTCAATGACAG+GGG + chr1_3:58907884-58907903 None:intergenic 60.0%
GCAGGCACCCCTCAATGACA+GGG + chr1_3:58907885-58907904 None:intergenic 60.0%
GGATCGCACATGGGCAGGTG+AGG + chr1_3:58897880-58897899 None:intergenic 65.0%
GGGCTCTGCGAAGATGACCG+TGG - chr1_3:58901144-58901163 Msa0129090:intron 65.0%
! GAAGGCTGCCAGGTTGGGTC+TGG + chr1_3:58901728-58901747 None:intergenic 65.0%
!! GCTTTTTGGCCCCCCTGGCA+CGG - chr1_3:58903973-58903992 Msa0129090:intron 65.0%
!! CTTTTTGGCCCCCCTGGCAC+GGG - chr1_3:58903974-58903993 Msa0129090:intron 65.0%
CGCATAGCCTCGTGCTCACC+AGG + chr1_3:58905572-58905591 None:intergenic 65.0%
GGGGCTACCCTGAGCCATAG+AGG + chr1_3:58906442-58906461 None:intergenic 65.0%
CCTCCTTGAGCTGCCTGGAG+GGG + chr1_3:58906488-58906507 None:intergenic 65.0%
CCCTCCTTGAGCTGCCTGGA+GGG + chr1_3:58906489-58906508 None:intergenic 65.0%
CCCTCCAGGCAGCTCAAGGA+GGG - chr1_3:58906486-58906505 Msa0129090:intron 65.0%
TCCCTCCTTGAGCTGCCTGG+AGG + chr1_3:58906490-58906509 None:intergenic 65.0%
GGCAGGCACCCCTCAATGAC+AGG + chr1_3:58907886-58907905 None:intergenic 65.0%
!! AGGGGTGCCTGCCCTATGCT+GGG - chr1_3:58907893-58907912 Msa0129090:CDS 65.0%
GCTGCCTGGAGGGGTCCCTT+GGG + chr1_3:58906479-58906498 None:intergenic 70.0%
AGCTGCCTGGAGGGGTCCCT+TGG + chr1_3:58906480-58906499 None:intergenic 70.0%
GGACCCCTCCAGGCAGCTCA+AGG - chr1_3:58906482-58906501 Msa0129090:intron 70.0%
CCCCTCCAGGCAGCTCAAGG+AGG - chr1_3:58906485-58906504 Msa0129090:intron 70.0%
!! GAGGGGTGCCTGCCCTATGC+TGG - chr1_3:58907892-58907911 Msa0129090:CDS 70.0%
GGTGCCCAAGGGACCCCTCC+AGG - chr1_3:58906472-58906491 Msa0129090:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 58894339 58908221 58894339 ID=Msa0129090;Name=Msa0129090
chr1_3 mRNA 58894339 58908221 58894339 ID=Msa0129090-mRNA-1;Parent=Msa0129090;Name=Msa0129090-mRNA-1;_AED=0.30;_eAED=0.30;_QI=100|0.96|0.96|1|0.92|0.88|27|573|1234
chr1_3 exon 58894339 58895025 58894339 ID=Msa0129090-mRNA-1:exon:19115;Parent=Msa0129090-mRNA-1
chr1_3 exon 58895161 58895265 58895161 ID=Msa0129090-mRNA-1:exon:19114;Parent=Msa0129090-mRNA-1
chr1_3 exon 58896433 58896492 58896433 ID=Msa0129090-mRNA-1:exon:19113;Parent=Msa0129090-mRNA-1
chr1_3 exon 58896592 58896730 58896592 ID=Msa0129090-mRNA-1:exon:19112;Parent=Msa0129090-mRNA-1
chr1_3 exon 58896837 58897021 58896837 ID=Msa0129090-mRNA-1:exon:19111;Parent=Msa0129090-mRNA-1
chr1_3 exon 58898307 58898390 58898307 ID=Msa0129090-mRNA-1:exon:19110;Parent=Msa0129090-mRNA-1
chr1_3 exon 58898482 58898604 58898482 ID=Msa0129090-mRNA-1:exon:19109;Parent=Msa0129090-mRNA-1
chr1_3 exon 58898734 58898913 58898734 ID=Msa0129090-mRNA-1:exon:19108;Parent=Msa0129090-mRNA-1
chr1_3 exon 58899067 58899136 58899067 ID=Msa0129090-mRNA-1:exon:19107;Parent=Msa0129090-mRNA-1
chr1_3 exon 58899277 58899373 58899277 ID=Msa0129090-mRNA-1:exon:19106;Parent=Msa0129090-mRNA-1
chr1_3 exon 58899463 58899538 58899463 ID=Msa0129090-mRNA-1:exon:19105;Parent=Msa0129090-mRNA-1
chr1_3 exon 58900272 58900361 58900272 ID=Msa0129090-mRNA-1:exon:19104;Parent=Msa0129090-mRNA-1
chr1_3 exon 58900449 58900550 58900449 ID=Msa0129090-mRNA-1:exon:19103;Parent=Msa0129090-mRNA-1
chr1_3 exon 58900760 58900831 58900760 ID=Msa0129090-mRNA-1:exon:19102;Parent=Msa0129090-mRNA-1
chr1_3 exon 58900939 58901103 58900939 ID=Msa0129090-mRNA-1:exon:19101;Parent=Msa0129090-mRNA-1
chr1_3 exon 58901196 58901269 58901196 ID=Msa0129090-mRNA-1:exon:19100;Parent=Msa0129090-mRNA-1
chr1_3 exon 58901380 58901528 58901380 ID=Msa0129090-mRNA-1:exon:19099;Parent=Msa0129090-mRNA-1
chr1_3 exon 58902104 58902170 58902104 ID=Msa0129090-mRNA-1:exon:19098;Parent=Msa0129090-mRNA-1
chr1_3 exon 58902304 58902535 58902304 ID=Msa0129090-mRNA-1:exon:19097;Parent=Msa0129090-mRNA-1
chr1_3 exon 58902748 58902839 58902748 ID=Msa0129090-mRNA-1:exon:19096;Parent=Msa0129090-mRNA-1
chr1_3 exon 58902945 58903066 58902945 ID=Msa0129090-mRNA-1:exon:19095;Parent=Msa0129090-mRNA-1
chr1_3 exon 58903288 58903955 58903288 ID=Msa0129090-mRNA-1:exon:19094;Parent=Msa0129090-mRNA-1
chr1_3 exon 58904165 58904311 58904165 ID=Msa0129090-mRNA-1:exon:19093;Parent=Msa0129090-mRNA-1
chr1_3 exon 58904570 58904686 58904570 ID=Msa0129090-mRNA-1:exon:19092;Parent=Msa0129090-mRNA-1
chr1_3 exon 58907523 58907635 58907523 ID=Msa0129090-mRNA-1:exon:19091;Parent=Msa0129090-mRNA-1
chr1_3 exon 58907759 58907930 58907759 ID=Msa0129090-mRNA-1:exon:19090;Parent=Msa0129090-mRNA-1
chr1_3 exon 58908032 58908221 58908032 ID=Msa0129090-mRNA-1:exon:19089;Parent=Msa0129090-mRNA-1
chr1_3 five_prime_UTR 58908122 58908221 58908122 ID=Msa0129090-mRNA-1:five_prime_utr;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58908032 58908121 58908032 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58907759 58907930 58907759 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58907523 58907635 58907523 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58904570 58904686 58904570 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58904165 58904311 58904165 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58903288 58903955 58903288 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58902945 58903066 58902945 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58902748 58902839 58902748 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58902304 58902535 58902304 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58902104 58902170 58902104 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58901380 58901528 58901380 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58901196 58901269 58901196 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58900939 58901103 58900939 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58900760 58900831 58900760 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58900449 58900550 58900449 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58900272 58900361 58900272 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58899463 58899538 58899463 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58899277 58899373 58899277 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58899067 58899136 58899067 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58898734 58898913 58898734 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58898482 58898604 58898482 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58898307 58898390 58898307 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58896837 58897021 58896837 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58896592 58896730 58896592 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58896433 58896492 58896433 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58895161 58895265 58895161 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 CDS 58894912 58895025 58894912 ID=Msa0129090-mRNA-1:cds;Parent=Msa0129090-mRNA-1
chr1_3 three_prime_UTR 58894339 58894911 58894339 ID=Msa0129090-mRNA-1:three_prime_utr;Parent=Msa0129090-mRNA-1
Gene Sequence

>Msa0129090

ATGGTTGAAACTAGAAGCAGTTCCTCTTCTTCCAAACGTCCTCTCTCTTCTCCTTCATCATCTCCTTCAAACTCAAAAAAACGATCCAAGGTCTCAAAGAATGTTTCATCCAAGGTTAATCCTTCACCGTTGGTCAACGAATCTGGTGAACAAGAGAAAAGACCATCTGATCTGTCAGAAATGGCTGTTGATGGTAACAATGACAAGTCTTCTTCTCTTCCAAACGAAGATGAAGCTTTGGTGTCTCCTCCTCAGTGTATAGGTCAAATTGCTGAGAAATCAAAGGTGTTACCTCCGTTAGCTCGGTCGAAGAAACGCTGCACAAAATCTAATTCTAAGTCAGCTTGGGGGAAGCTTATTTCTCAATCTTCTGAGAATCCTCACCTGCCCATGTGCGATCCTATCTACACTGTTGGCCAATGTCGTCAATGTAATTTATGGCTGAAGGATCCCTCTGTTAGTAATGTTTTGTGCAAATTGAGCCATATAGAGCATGGAGGTTCATCTGTTGCATTGCTGGAAATCATAGGGAGTTGTGGTGCTGTGAAAGTTAATGGAAAGATGTGTGGGAAGAAATCCCGTCATATTTTAAGTGGAGGTGATGAAGTTGTCTTTGGTGTTTCCGGGAAGCAGGCTTATCAGCTCAATAATAATATCACTACAGCCAATATACCTTCTCCTGTGACCATTTTAGAAGCCCAGGGTGCTTCAATAACTGGAACGCAACTTGATGCAAGATCTGGAGACCTGTCGTCTGTTGCTGGAGCTTCATTATTGGCCTCTTTTTCTGAACTTAATGAAGATTTAACCATGATTTCACCTGCTTCTAACACTAGCAAGAACATGCAGCAGAAGACTGATGTTTCATCACTACCTGCCAGCAATGGGGATGATAAGGCAAACATTGACATGAAGCACAACACCATTAATGACGAACCAGATAGAGTTTTTTCTGCTGAGGAAACTGGTCTTCCGTCCTCTACCACCGTTAATGAAGATCCAAATGTTGTTGCTGTAGAAGTCAATGCTGGTGTGGATGCAGATGTTGGGAAGATGACTGCTGCTTCCTGCAAATTGAGACCATTATTGCACAAGCTTTCTGGATCATGTCCTGAATTTGATTTGAGTGGCAACATTGCCAAGATATTGGAAGAACGTAAGGAATTAAAGGAACTCCTTAAAGATGTTGATACCCCAACACTATTGACATCGCCCAAGCAACAAGCCTTAAAGGATAGCTTACAGATGAGAATTCTCAATGCTGAGAATATTGATGTTTCCTTTGAAAGTTTCCCATATTATCTAAGTGATACAACAAAGAATGTTTTGATTACTTCTGCATACATTCATTTGAAGTGCAATGGCTCTGGAAAATATGTTTCAGAACTTCCGTCGCTGTCCCCACGGATATTGTTATCTGGTCCTGCAGGCTCTGAAATATATCAGGAGACTCTGTCAAAGGCACTTGCAAAGCATTTTGGAGCGTGGCTACTAATTGTGGATTCTCTTTCACCTCCTGGTCGAACACCATTGAAGGAAGTTGATTCTACTAAAGAAATTCCAATTCCAAGGACTGAAAGAACATCTATGTTTACCAAGAGAAGTACTCCGGCTGCTACAATACATATACAGCATAAGAAACCAGCTTCTAGTGTTGATGCCCAAATTATAGGTGGATCCACATCTAGTTCACAGGCTGTACTGAAGCAAGAAATTTCTACGGCATCATCAAAAGGCAGTGCTTTTAAAACAGGTGATCGGGTAAAATATGTTGGCGACTTCCCTTCTGCTGCCTCATCACCACAAGTTTTTCCTTCAAGGGGACCAAGTTATGGCTGCCGGGGCAAAGTTCTCCTTGCTTTTGAAAATAACGGGTCTTCAAAAATTGGAGTTAGATTTGAGAAATCAATTCCAGATGGAAATGATCTTGGAGGGCTCTGCGAAGATGACCGTGGGTTCTTTTGTTCTGCCAATCATTTGGTACTGGTAGATGGTTGTGGAGGGGATGACTCTGGAAAAGTTGCTATTAATGAAATCTTTGAGATTGCCTCTAGTCTGAGTAAAAGTGGAGCCCTAGTGTTGTTGATTAAAGATATAGAGAAGGGTGTGGCTGGGAACTCAGAAGTTTTAAAAAGTAAATTTGCAAGCTTGCCACAGAATGTTGTAGTAATTGGTTCACATATCCACCCGGACAATCGTAAAGAGAAGACCCAACCTGGCAGCCTTCTGTTTACAAAATTTGGAGGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTACGAGGCTACATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAGCAACTCAACAGGCTTTTCCCAAACAAAGTTACAATACAGATGCCTCAGGATGAGGCTTTACTTTCTGATTGGAAACAGCACCTAGAACGTGACGTAGAAACTATGAAAGCTCAGTCCAACGTTGTCAGCATTCGCTTGGTGCTCAACAAGTTTGGACTGGATTGCCCTGAACTTGAGACTCTTTCCATCAAAGATCAAACTCTAACAACTGAAAATGTGGAGAAGATTATTGGCTGGGCGATAAGTTACCATTTTATGCATTCATCTGAGGCTTCTCCTGAAGAATCAAAGCCTGTGATATCTGCAGAGAGCATTCAGTATGGGTTTAACATTCTACAGGGTATTCAAAATGAGAACAAGAGCGTAAAAAAATCATTAAAGGACGTAGTTACTGAAAATGAATTTGAGAAGAAACTGCTTGGTGATGTTATTCCACCAACTGATATTGGGGTCTCATTCAATGATATTGGAGCTTTAGAAAATGTTAAGGACACCTTAAAGGAATTGGTCATGCTTCCTCTTCAAAGGCCTGAATTATTTTGCAAAGGACAACTAACTAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACGGGAAAAACAATGCTTGCAAAGGCGGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATCTCCATGTCTAGCATTACTTCGAAGTGGTTTGGTGAAGGAGAAAAGTATGTCAAAGCAGTTTTTTCTCTGGCCAGCAAAATTGCTCCAAGCGTTATTTTTGTTGATGAGGTTGATAGTATGTTGGGGAGACGTGAAAATCCTGGTGAGCACGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGCACAAAAGATAGAGAGCGTGTACTTGTTCTTGCTGCCACGAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCGCGAAGATTGATGGTTAATTTGCCAGATGCAACAAACAGAGAAAAAATTATGAGAGTCATTTTAGCAAAAGAAGAATTGGCGCCTGATGTTAATTTAGAAGCATTAGCAAATATGACTGATGGATACTCCGGAAGTGACCTAAAGAATCTGTGTGTCACTGCAGCGCACTGTCCAATAAGGGAGATCTTGGAGAAGGAAAAGAAGGAGAGAACCTCTGCATTGGCTGAGAACAAGCCTTTACCTGGACTCTGTAGCAGTGCCGACATTCGTCCCTTAAAGATGGAAGATTTTAAATATGCACACGAGCAGGTGTGTGCAAGTGTGTCATCGGATTCAACAAATATGACCGAACTACTCCAATGGAATGACCTCTATGGAGAAGGTGGATCAAGAAAAAAGACATCTTTGAGCTATTTCATGTAA
Protein sequence

>Msa0129090

MVETRSSSSSSKRPLSSPSSSPSNSKKRSKVSKNVSSKVNPSPLVNESGEQEKRPSDLSEMAVDGNNDKSSSLPNEDEALVSPPQCIGQIAEKSKVLPPLARSKKRCTKSNSKSAWGKLISQSSENPHLPMCDPIYTVGQCRQCNLWLKDPSVSNVLCKLSHIEHGGSSVALLEIIGSCGAVKVNGKMCGKKSRHILSGGDEVVFGVSGKQAYQLNNNITTANIPSPVTILEAQGASITGTQLDARSGDLSSVAGASLLASFSELNEDLTMISPASNTSKNMQQKTDVSSLPASNGDDKANIDMKHNTINDEPDRVFSAEETGLPSSTTVNEDPNVVAVEVNAGVDADVGKMTAASCKLRPLLHKLSGSCPEFDLSGNIAKILEERKELKELLKDVDTPTLLTSPKQQALKDSLQMRILNAENIDVSFESFPYYLSDTTKNVLITSAYIHLKCNGSGKYVSELPSLSPRILLSGPAGSEIYQETLSKALAKHFGAWLLIVDSLSPPGRTPLKEVDSTKEIPIPRTERTSMFTKRSTPAATIHIQHKKPASSVDAQIIGGSTSSSQAVLKQEISTASSKGSAFKTGDRVKYVGDFPSAASSPQVFPSRGPSYGCRGKVLLAFENNGSSKIGVRFEKSIPDGNDLGGLCEDDRGFFCSANHLVLVDGCGGDDSGKVAINEIFEIASSLSKSGALVLLIKDIEKGVAGNSEVLKSKFASLPQNVVVIGSHIHPDNRKEKTQPGSLLFTKFGGNQTALLDLAFPDNFTRLHDRSKETPKVMKQLNRLFPNKVTIQMPQDEALLSDWKQHLERDVETMKAQSNVVSIRLVLNKFGLDCPELETLSIKDQTLTTENVEKIIGWAISYHFMHSSEASPEESKPVISAESIQYGFNILQGIQNENKSVKKSLKDVVTENEFEKKLLGDVIPPTDIGVSFNDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNREKIMRVILAKEELAPDVNLEALANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERTSALAENKPLPGLCSSADIRPLKMEDFKYAHEQVCASVSSDSTNMTELLQWNDLYGEGGSRKKTSLSYFM*