AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0130480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130480 MtrunA17_Chr1g0198751 76.346 520 27 3 27 506 6 469 0.0 780
Msa0130480 MtrunA17_Chr1g0198751 62.025 474 109 5 630 1034 3 474 0.0 571
Msa0130480 MtrunA17_Chr5g0422431 55.186 511 117 7 27 506 4 433 3.50e-172 511
Msa0130480 MtrunA17_Chr5g0422431 57.991 438 138 9 633 1030 4 435 2.35e-155 467
Msa0130480 MtrunA17_Chr1g0198741 82.550 298 32 4 741 1034 8 289 2.87e-168 494
Msa0130480 MtrunA17_Chr1g0198741 61.442 319 70 6 183 499 8 275 1.94e-113 352
Msa0130480 MtrunA17_Chr7g0227071 53.271 214 98 1 635 846 5 218 1.44e-72 249
Msa0130480 MtrunA17_Chr7g0227071 45.802 262 92 2 29 288 5 218 4.76e-70 242
Msa0130480 MtrunA17_Chr2g0282871 54.762 210 92 2 659 865 25 234 8.37e-67 227
Msa0130480 MtrunA17_Chr2g0282871 55.779 199 87 1 123 320 49 247 2.68e-65 223
Msa0130480 MtrunA17_Chr8g0389661 62.428 173 57 3 123 287 43 215 2.21e-66 231
Msa0130480 MtrunA17_Chr8g0389661 51.131 221 98 4 663 875 27 245 3.23e-63 223
Msa0130480 MtrunA17_Chr4g0046431 45.878 279 131 8 643 904 19 294 4.49e-65 222
Msa0130480 MtrunA17_Chr4g0046431 60.819 171 66 1 123 292 64 234 1.76e-63 218
Msa0130480 MtrunA17_Chr4g0040541 58.721 172 69 1 123 292 44 215 3.50e-61 210
Msa0130480 MtrunA17_Chr4g0040541 55.080 187 79 2 664 845 24 210 3.57e-61 210
Msa0130480 MtrunA17_Chr8g0367761 52.195 205 90 4 643 839 19 223 8.11e-61 208
Msa0130480 MtrunA17_Chr8g0367761 61.250 160 61 1 123 281 64 223 2.94e-60 206
Msa0130480 MtrunA17_Chr2g0324961 55.914 186 78 2 664 845 25 210 8.40e-57 197
Msa0130480 MtrunA17_Chr2g0324961 59.302 172 69 1 122 292 44 215 5.80e-56 195
Msa0130480 MtrunA17_Chr6g0484441 33.520 179 88 10 685 855 5 160 5.57e-15 77.4
Msa0130480 MtrunA17_Chr4g0047841 34.545 165 82 9 683 840 13 158 1.40e-12 70.5
Msa0130480 MtrunA17_Chr2g0318101 35.333 150 71 9 683 825 13 143 2.72e-12 69.7
Msa0130480 MtrunA17_Chr8g0359921 34.752 141 76 6 685 824 14 139 6.44e-11 65.1
Msa0130480 MtrunA17_Chr1g0147421 31.765 170 93 9 685 847 27 180 7.85e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130480 AT1G25580.1 45.019 522 156 13 28 506 5 438 1.52e-120 377
Msa0130480 AT1G25580.1 46.341 451 180 14 634 1034 5 443 6.10e-111 352
Msa0130480 AT4G29230.3 61.714 175 58 2 122 287 43 217 1.78e-68 236
Msa0130480 AT4G29230.3 56.250 192 73 3 663 845 28 217 3.27e-65 227
Msa0130480 AT3G01600.1 51.339 224 104 3 634 855 4 224 7.53e-68 232
Msa0130480 AT3G01600.1 46.886 273 92 6 28 298 4 225 8.92e-68 232
Msa0130480 AT4G29230.1 61.714 175 58 2 122 287 43 217 1.03e-67 236
Msa0130480 AT4G29230.1 56.250 192 73 3 663 845 28 217 1.22e-64 227
Msa0130480 AT4G29230.2 61.494 174 58 2 123 287 43 216 4.74e-67 234
Msa0130480 AT4G29230.2 55.729 192 73 3 663 845 28 216 8.58e-64 225
Msa0130480 AT5G14490.2 52.113 213 99 2 634 844 4 215 5.17e-66 224
Msa0130480 AT5G14490.2 41.837 294 114 4 28 319 4 242 1.34e-64 220
Msa0130480 AT5G14490.4 52.113 213 99 2 634 844 4 215 7.15e-66 226
Msa0130480 AT5G14490.4 41.837 294 114 4 28 319 4 242 1.95e-64 222
Msa0130480 AT5G14490.1 52.113 213 99 2 634 844 7 218 1.01e-65 226
Msa0130480 AT5G14490.1 41.837 294 114 4 28 319 7 245 2.37e-64 222
Msa0130480 AT5G14490.3 52.113 213 99 2 634 844 7 218 1.72e-65 225
Msa0130480 AT5G14490.3 41.837 294 114 4 28 319 7 245 3.95e-64 221
Msa0130480 AT5G56620.2 56.757 185 66 3 116 287 32 215 1.58e-63 221
Msa0130480 AT5G56620.2 52.308 195 80 3 663 845 22 215 1.67e-60 213
Msa0130480 AT5G56620.3 56.757 185 66 3 116 287 32 215 1.85e-63 221
Msa0130480 AT5G56620.3 52.308 195 80 3 663 845 22 215 1.90e-60 213
Msa0130480 AT5G56620.1 56.757 185 66 3 116 287 32 215 3.03e-63 220
Msa0130480 AT5G56620.1 52.308 195 80 3 663 845 22 215 4.64e-60 211
Msa0130480 AT1G28470.1 50.679 221 98 3 636 850 28 243 5.96e-63 216
Msa0130480 AT1G28470.1 59.884 172 68 1 122 292 72 243 7.78e-63 216
Msa0130480 AT4G28500.1 57.803 173 71 1 122 292 54 226 1.34e-61 213
Msa0130480 AT4G28500.1 49.776 223 98 5 634 845 2 221 5.05e-60 208
Msa0130480 AT5G18270.2 30.041 243 121 14 677 898 13 227 1.03e-12 71.2
Msa0130480 AT1G02220.1 33.125 160 87 7 128 284 4 146 1.22e-12 71.6
Msa0130480 AT5G18270.1 30.041 243 121 14 677 898 13 227 1.36e-12 70.9
Msa0130480 AT1G01720.1 36.111 144 71 7 127 267 7 132 4.12e-12 68.6
Msa0130480 AT1G01720.1 36.111 144 71 8 685 825 7 132 1.14e-11 67.4
Msa0130480 AT5G39610.1 35.032 157 79 6 685 840 20 154 5.13e-12 68.2
Msa0130480 AT5G53950.1 31.019 216 121 10 685 890 17 214 1.05e-11 68.6
Msa0130480 AT3G04420.2 31.677 161 93 6 128 285 4 150 1.31e-11 67.0
Msa0130480 AT3G04420.1 31.677 161 93 6 128 285 4 150 6.79e-11 65.5

Find 237 sgRNAs with CRISPR-Local

Find 1213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATATGTGGTCAAGATTT+TGG 0.149918 1_3:-60784622 Msa0130480:CDS
CAGTGTCAAGGTTGAGATTT+TGG 0.158446 1_3:+60783197 None:intergenic
TTGTTCTTGGTCTACAAAAT+TGG 0.165705 1_3:+60770140 None:intergenic
TGCCAGTGTGGTCAAGATTT+TGG 0.220058 1_3:+60769014 None:intergenic
TATGGTGAGTTTCTTGTTCT+TGG 0.221376 1_3:+60770127 None:intergenic
ATTTATCACTACTCTTAAAA+TGG 0.223272 1_3:-60784848 Msa0130480:CDS
CTTTCTGTATATGCTCATTT+AGG 0.224428 1_3:-60783349 Msa0130480:CDS
CCAGCAGCAGCAAGCCAAAT+TGG 0.225006 1_3:-60784395 Msa0130480:CDS
ATAGTTGCTTCCGCGGTTTC+AGG 0.226841 1_3:+60770222 None:intergenic
TCGATAACATGTTGACAATT+TGG 0.240409 1_3:+60787026 None:intergenic
TTAACATTCGAAAAGAAATT+AGG 0.242077 1_3:+60780255 None:intergenic
TCCACAACATGTTGACAATT+AGG 0.244707 1_3:+60773081 None:intergenic
TTCGGCCCTAGCCGCTTAAT+TGG 0.244771 1_3:-60773410 Msa0130480:intron
CGGATTCTTGATAGCTGTTT+TGG 0.245729 1_3:-60786568 Msa0130480:intron
CAGTGTCAGCGTCAAGATTA+AGG 0.257120 1_3:+60783245 None:intergenic
CCGAGGTTTCAGGAACATTT+TGG 0.262495 1_3:+60784359 None:intergenic
CGATTGTGGCAGCGACATTC+AGG 0.267920 1_3:+60787554 None:intergenic
ACAGTTGCTTCCGAGGTTTC+AGG 0.268678 1_3:+60784349 None:intergenic
AGGTTCAGTGGTCGCAAAAT+TGG 0.270772 1_3:+60770176 None:intergenic
ATTTATCACTACTCTTAAAA+TGG 0.271764 1_3:-60770724 Msa0130480:CDS
CTTTCGGCTTCCAGTATTAT+AGG 0.275483 1_3:+60784651 None:intergenic
CCAGCAGCAGCAAGCCATAT+TGG 0.276087 1_3:-60770268 Msa0130480:CDS
TATGATGAGATTCTTGTTCT+TGG 0.289036 1_3:+60784248 None:intergenic
GAGAGTCTCTCTCTCCCTTA+TGG 0.289886 1_3:-60788157 Msa0130480:exon
TCGAACCAAGAAAATGTTTC+CGG 0.290852 1_3:+60769160 None:intergenic
CGATAACATGTTGACAATTT+GGG 0.296736 1_3:+60787027 None:intergenic
TGACATGCCACTGAATCTAT+TGG 0.299354 1_3:-60769191 Msa0130480:CDS
TCCAACGCGTTCACTGTTCT+TGG 0.303312 1_3:-60773353 Msa0130480:CDS
CATCTGATCAAGAGATAATA+TGG 0.323541 1_3:-60770803 Msa0130480:CDS
CATCTGATCAAGAGATAATA+TGG 0.323541 1_3:-60784927 Msa0130480:CDS
TCGGCCCTAGCCGCTTAATT+GGG 0.324015 1_3:-60773409 Msa0130480:intron
TCTTCTAACTGAGGAAGATT+TGG 0.326168 1_3:+60769307 None:intergenic
GCAATCAAAGCCTATAATAC+TGG 0.327546 1_3:-60784661 Msa0130480:CDS
GGATCAAATTTAACACCTTT+AGG 0.328542 1_3:+60770825 None:intergenic
CTCTCCCTTATGGCTACGTC+TGG 0.329947 1_3:-60788147 Msa0130480:exon
TTCTCATTGCGAGGAGGTTC+AGG 0.331317 1_3:+60784289 None:intergenic
CCACAACATGTTGACAATTA+GGG 0.332418 1_3:+60773082 None:intergenic
AATCCGAGCAAGGCTGCATT+TGG 0.339878 1_3:+60786585 None:intergenic
ATGTCTTTCTTTAACTGCTC+TGG 0.340220 1_3:+60769046 None:intergenic
TCCCACATCATCCATGCTTC+AGG 0.343541 1_3:-60773328 Msa0130480:CDS
TATAGGCTTTGATTGCTCTA+TGG 0.349409 1_3:+60784668 None:intergenic
GCCTCACACTTGGGCCCAAT+GGG 0.351705 1_3:+60773305 None:intergenic
GAATCTATTGGATTCACTTC+CGG 0.358496 1_3:-60769179 Msa0130480:CDS
AGGTTCAGGCGTCACGGAAT+TGG 0.365916 1_3:+60784303 None:intergenic
TGTTCTTGGTCTACAAAATT+GGG 0.368626 1_3:+60770141 None:intergenic
CGCCTCACACTTGGGCCCAA+TGG 0.371577 1_3:+60773304 None:intergenic
GAGGATAGGTTTAGTCCTTC+CGG 0.373927 1_3:+60784579 None:intergenic
GTACACTTGCAACCGCTATA+AGG 0.374099 1_3:-60773161 Msa0130480:CDS
AGATTCTACCAGATCTTTCT+CGG 0.381982 1_3:-60783597 Msa0130480:CDS
ATCCATGCTTCAGGCCCATT+GGG 0.382241 1_3:-60773319 Msa0130480:CDS
CAGCAGCAGCAAGCCATATT+GGG 0.389779 1_3:-60770267 Msa0130480:CDS
GCAGAAATCTCAATAGATTC+AGG 0.390362 1_3:+60786163 None:intergenic
TATAAGCTTTCACTGCTCTA+TGG 0.392319 1_3:+60770541 None:intergenic
CTTTATATGTTTCCAGAGAA+TGG 0.394253 1_3:-60770390 Msa0130480:CDS
TGAACTCCGTTCAAGAAGAT+AGG 0.395219 1_3:+60770438 None:intergenic
AAAGAACCTGGTCGCATCTT+CGG 0.397326 1_3:+60780469 None:intergenic
GGTTCAGGCGTCACGGAATT+GGG 0.400382 1_3:+60784304 None:intergenic
TGCCATTCTGATCATCTTGA+AGG 0.401521 1_3:+60780699 None:intergenic
GAAAAGCTGAGAAAACTAAC+TGG 0.402325 1_3:-60784492 Msa0130480:CDS
TCAATAAATTCAACTTATGA+TGG 0.404473 1_3:+60786212 None:intergenic
CCAATTTGGCTTGCTGCTGC+TGG 0.410429 1_3:+60784395 None:intergenic
CCAATATGGCTTGCTGCTGC+TGG 0.415718 1_3:+60770268 None:intergenic
CAGATCTTTCTCGGTTAGAA+TGG 0.419534 1_3:-60783588 Msa0130480:CDS
ACCGCTATAAGGTGTGCATC+TGG 0.428125 1_3:-60773150 Msa0130480:CDS
TATGTCCGCTGGCACAAGAC+TGG 0.431620 1_3:-60770471 Msa0130480:CDS
GGTTCAGTGGTCGCAAAATT+GGG 0.435686 1_3:+60770177 None:intergenic
GCCACAATCGCTTCACAACT+TGG 0.437490 1_3:-60787541 Msa0130480:CDS
GCAGTGAAAGCTTATAGTAC+TGG 0.438200 1_3:-60770534 Msa0130480:CDS
TTGGCGACTGAAGTTGTCCT+TGG 0.438231 1_3:-60780402 Msa0130480:CDS
ATACACTTCTTATAGTTACT+TGG 0.438973 1_3:-60780421 Msa0130480:CDS
CGACATTCGATTAAGTCAAC+TGG 0.441693 1_3:-60768966 Msa0130480:intron
CGACATTCGATTAAGTCAAC+TGG 0.441693 1_3:-60783146 Msa0130480:intron
CCAACGCGTTCACTGTTCTT+GGG 0.442664 1_3:-60773352 Msa0130480:CDS
TGGAACAGAAGAGGATGAAA+AGG 0.444567 1_3:-60784449 Msa0130480:CDS
ATAGAAACTCAAACTAATGA+AGG 0.445370 1_3:-60783511 Msa0130480:CDS
CATCCATGCTTCAGGCCCAT+TGG 0.448027 1_3:-60773320 Msa0130480:CDS
AAAGTTCTACCTGAGGAATA+TGG 0.448471 1_3:+60770109 None:intergenic
CAGCAGCAGCAAGCCAAATT+GGG 0.449148 1_3:-60784394 Msa0130480:CDS
CTCCCAAATGCAGCCTTGCT+CGG 0.453860 1_3:-60786588 Msa0130480:CDS
AGAATGGCTACTTGAAAGTC+AGG 0.455673 1_3:-60783572 Msa0130480:CDS
TGGGGAAAACGGAGAGCAAA+TGG 0.462093 1_3:-60783383 Msa0130480:CDS
ATCCGAGCAAGGCTGCATTT+GGG 0.466060 1_3:+60786586 None:intergenic
TTCAGAGCCAGTCTCCGAAA+AGG 0.466169 1_3:-60783408 Msa0130480:CDS
CATCCTCTTCTGTTCCAAGA+TGG 0.472200 1_3:+60784455 None:intergenic
TTGACAATTTGGGCAAGCTC+TGG 0.472858 1_3:+60787037 None:intergenic
CGTCGTGGCTGGTGGACAAA+AGG 0.474826 1_3:-60787127 Msa0130480:CDS
AGAATGGCTACTTAATAGTC+AGG 0.475425 1_3:-60769287 Msa0130480:CDS
TTAACACCTTTAGGAAGTCC+AGG 0.482399 1_3:+60770834 None:intergenic
GCCAGTCTCCGAAAAGGCAC+AGG 0.483606 1_3:-60769123 Msa0130480:CDS
AAAAGTACAGTCCATCTTGA+AGG 0.486761 1_3:+60780497 None:intergenic
AATATAGGTGTTTCACAAGA+TGG 0.488029 1_3:-60770582 Msa0130480:intron
CAGAAGAGGATGAGAGGGAA+GGG 0.488806 1_3:-60770317 Msa0130480:CDS
CTAAACCTATCCTCTTGAAC+GGG 0.489073 1_3:-60784570 Msa0130480:CDS
GCCAGTCTCCGAAAAGGGAT+GGG 0.491139 1_3:-60783402 Msa0130480:CDS
GTTATGCATCAGTATCATCT+TGG 0.493181 1_3:-60770342 Msa0130480:CDS
GGAAGCAACTGTTATAAAAG+TGG 0.494051 1_3:-60784338 Msa0130480:CDS
CATTCTAACCGAGAAAGATC+TGG 0.494095 1_3:+60783589 None:intergenic
CTTTCGACATATGATCATCT+AGG 0.495768 1_3:-60769070 Msa0130480:CDS
CATACCCAGACGTAGCCATA+AGG 0.498248 1_3:+60788142 None:intergenic
CGGCCCTAGCCGCTTAATTG+GGG 0.498850 1_3:-60773408 Msa0130480:intron
ACTCATCCTCAGCGTTTACC+AGG 0.499467 1_3:-60784808 Msa0130480:intron
TAAATTCATCGATGAATGGA+TGG 0.502555 1_3:+60784866 None:intergenic
AATTCAATAAATTCTGCGAC+AGG 0.503431 1_3:+60783473 None:intergenic
TAGAAACTCAATTTCATGTA+GGG 0.504338 1_3:-60769225 Msa0130480:CDS
ACTCATCCTCAGCATTTGCC+AGG 0.505505 1_3:-60770684 Msa0130480:intron
TTCAAAGCCAGTCTCCGAAA+AGG 0.507580 1_3:-60769129 Msa0130480:CDS
AATGTAGGTGTTTCGCGAGA+TGG 0.508052 1_3:-60784709 Msa0130480:intron
CTGAAAGAAATCTGCGAACA+AGG 0.508582 1_3:+60783426 None:intergenic
GACGTCCGCTGGCACAAGAC+CGG 0.509302 1_3:-60784598 Msa0130480:CDS
CAATAAATTCAACTTATGAT+GGG 0.509573 1_3:+60786213 None:intergenic
TTTCCAGAGAATGGAGGAAA+AGG 0.510158 1_3:-60770381 Msa0130480:CDS
ACTACTCTTAAAATGGATGA+TGG 0.510952 1_3:-60770717 Msa0130480:CDS
GTTATGCATCAATACCATCT+TGG 0.511788 1_3:-60784469 Msa0130480:CDS
ACAAAATTGGGACTGATAAG+AGG 0.512652 1_3:+60770153 None:intergenic
TTAACACCTCTAGGTAATCC+AGG 0.513694 1_3:+60784958 None:intergenic
CCGAAAAGGGATGGGGAAAA+CGG 0.514006 1_3:-60783394 Msa0130480:CDS
ACTACTCTTAAAATGGATGA+TGG 0.516095 1_3:-60784841 Msa0130480:CDS
GTGATAAATGCATCGATGAA+AGG 0.516322 1_3:+60770738 None:intergenic
ACCAAGTTGTGAAGCGATTG+TGG 0.516955 1_3:+60787540 None:intergenic
AAGAGTTTGCTTATGTCCGC+TGG 0.517104 1_3:-60770482 Msa0130480:CDS
TCAGAGCCAGTCTCCGAAAA+GGG 0.517995 1_3:-60783407 Msa0130480:CDS
TGATAAATGCATCGATGAAA+GGG 0.518562 1_3:+60770739 None:intergenic
ACAGAAGAGGATGAGAGGGA+AGG 0.522455 1_3:-60770318 Msa0130480:CDS
GGCCCAATGGGCCTGAAGCA+TGG 0.522528 1_3:+60773317 None:intergenic
CGAAAGCGGCGAAGAATATG+TGG 0.522848 1_3:-60770507 Msa0130480:CDS
TAGCGGTTGCAAGTGTACTT+TGG 0.525421 1_3:+60773166 None:intergenic
TTACAGAGTCTCCTTCAAGA+TGG 0.526242 1_3:-60780508 Msa0130480:intron
GTGATAAATTCATCGATGAA+TGG 0.527452 1_3:+60784862 None:intergenic
CCAAAATGTTCCTGAAACCT+CGG 0.528119 1_3:-60784359 Msa0130480:CDS
ACAGAAGAGGATGAAAAGGA+TGG 0.529217 1_3:-60784445 Msa0130480:CDS
TTCTTGAACGGAGTTCAGAA+AGG 0.529603 1_3:-60770432 Msa0130480:CDS
ATCTTCCTCAGTTAGAAGAA+TGG 0.529692 1_3:-60769303 Msa0130480:CDS
TAGGTAACACAAGAGTGGCC+TGG 0.532893 1_3:-60784976 Msa0130480:CDS
AGCCAGTCTCCGAAAAGGGA+TGG 0.533326 1_3:-60783403 Msa0130480:CDS
CAATTAGGGCACGCTCTGGT+AGG 0.534555 1_3:+60773096 None:intergenic
CATATTATCTCTTGATCAGA+TGG 0.535616 1_3:+60770804 None:intergenic
CATATTATCTCTTGATCAGA+TGG 0.535616 1_3:+60784928 None:intergenic
GAGGTTGCAATGAGCAATGA+AGG 0.538507 1_3:+60773374 None:intergenic
TGGCACTTGCTTGCAAAAGT+TGG 0.539348 1_3:-60770783 Msa0130480:CDS
TGGCACTTGCTTGCAAAAGT+TGG 0.539348 1_3:-60784907 Msa0130480:CDS
TAGAAACTCAAACTAATGAA+GGG 0.541977 1_3:-60783510 Msa0130480:CDS
AGAATCTCATCATAGTCCTC+AGG 0.542768 1_3:-60784239 Msa0130480:intron
TCTTTCCAGTCTTGTGCCAG+CGG 0.546974 1_3:+60770466 None:intergenic
TCCTTCCGGTCTTGTGCCAG+CGG 0.547113 1_3:+60784593 None:intergenic
TTGACAATTAGGGCACGCTC+TGG 0.548349 1_3:+60773092 None:intergenic
TATATGTAGACCGTCGTGGC+TGG 0.550711 1_3:-60787138 Msa0130480:intron
CTTTCTGAAGCCCGTTCAAG+AGG 0.552172 1_3:+60784560 None:intergenic
GAGTGGCCTGGACTTCCTAA+AGG 0.554416 1_3:-60770840 Msa0130480:CDS
ATGCAGACCATCGTGGTTGG+TGG 0.556083 1_3:-60773190 Msa0130480:intron
AGTGTATAGATGATGATCCT+TGG 0.556485 1_3:+60780437 None:intergenic
GCTCTACATTTGCAGTGTCA+AGG 0.556566 1_3:+60783185 None:intergenic
AAGAACAGTGAACGCGTTGG+AGG 0.558755 1_3:+60773355 None:intergenic
ATACCCAGACGTAGCCATAA+GGG 0.559692 1_3:+60788143 None:intergenic
CTCTTGAACGGGCTTCAGAA+AGG 0.560131 1_3:-60784559 Msa0130480:CDS
GTAGAAACTCAATTTCATGT+AGG 0.560253 1_3:-60769226 Msa0130480:CDS
TGGAACAGAAGAGGATGAGA+GGG 0.560783 1_3:-60770322 Msa0130480:CDS
TCACAGGAGCTATATCGACT+AGG 0.561856 1_3:-60768833 Msa0130480:CDS
CCCTAATTGTCAACATGTTG+TGG 0.563512 1_3:-60773082 Msa0130480:CDS
ATGTAGACCGTCGTGGCTGG+TGG 0.564418 1_3:-60787135 Msa0130480:intron
AAATTCATCGATGAATGGAT+GGG 0.565244 1_3:+60784867 None:intergenic
TGAAGCCCGTTCAAGAGGAT+AGG 0.565498 1_3:+60784565 None:intergenic
GTCACGGAATTGGGAGTGAC+TGG 0.565831 1_3:+60784313 None:intergenic
CAATTTGGGCAAGCTCTGGT+AGG 0.567523 1_3:+60787041 None:intergenic
AGAAACTCACCATATTCCTC+AGG 0.572055 1_3:-60770118 Msa0130480:intron
GGATCAAATTTAACACCTCT+AGG 0.573417 1_3:+60784949 None:intergenic
TTGCTTGCAAAAGTTGGTGA+AGG 0.575602 1_3:-60770777 Msa0130480:CDS
TTGCTTGCAAAAGTTGGTGA+AGG 0.575602 1_3:-60784901 Msa0130480:CDS
TTACAGCCGAAGATGCGACC+AGG 0.575964 1_3:-60780475 Msa0130480:CDS
TAGGTAACACAAGAGTGGCC+TGG 0.577846 1_3:-60770852 Msa0130480:CDS
CACAGGAGCTATATCGACTA+GGG 0.578105 1_3:-60768832 Msa0130480:CDS
CTCCTTCAAGATGATCAGAA+TGG 0.578799 1_3:-60780701 Msa0130480:CDS
ATAGTCAGGATGACTGTGAA+GGG 0.580319 1_3:-60769273 Msa0130480:CDS
GGCCTGAAGCATGGATGATG+TGG 0.580663 1_3:+60773326 None:intergenic
CCAGTCTCCGAAAAGGGATG+GGG 0.581156 1_3:-60783401 Msa0130480:CDS
TCTCCCTTATGGCTACGTCT+GGG 0.581507 1_3:-60788146 Msa0130480:intron
GAACATTGCTTCTCATTGCG+AGG 0.584286 1_3:+60784280 None:intergenic
GGCCCTAGCCGCTTAATTGG+GGG 0.585248 1_3:-60773407 Msa0130480:intron
ACTAAACCTATCCTCTTGAA+CGG 0.585397 1_3:-60784571 Msa0130480:CDS
ACTAAACCTATCTTCTTGAA+CGG 0.586510 1_3:-60770444 Msa0130480:CDS
TGATCATATGTCGAAAGACT+AGG 0.588679 1_3:+60769076 None:intergenic
AATAAATTCAACTTATGATG+GGG 0.591889 1_3:+60786214 None:intergenic
CTTATAGGAATTCAGCTCAC+AGG 0.592344 1_3:-60768849 Msa0130480:intron
TGATCAGAATGGCAACGGAA+AGG 0.595610 1_3:-60780690 Msa0130480:CDS
CAAGATGATCAGAATGGCAA+CGG 0.598204 1_3:-60780695 Msa0130480:CDS
CTTTATATGACTCCAGAGAG+TGG 0.599269 1_3:-60784517 Msa0130480:CDS
TCCGCTGGCACAAGACCGGA+AGG 0.600544 1_3:-60784594 Msa0130480:CDS
GCGAGGAGGTTCAGGCGTCA+CGG 0.600720 1_3:+60784297 None:intergenic
AATTCACAGCAACTTGCGGA+AGG 0.600786 1_3:-60783454 Msa0130480:CDS
CTTGTATATGTAGACCGTCG+TGG 0.601435 1_3:-60787142 Msa0130480:intron
TTGGAACAGAAGAGGATGAG+AGG 0.602637 1_3:-60770323 Msa0130480:CDS
AATAGTCAGGATGACTGTGA+AGG 0.603938 1_3:-60769274 Msa0130480:CDS
TGACTTAATCGAATGTCGGA+AGG 0.609614 1_3:+60783151 None:intergenic
TGAAATTGAGTTTCTACCGT+CGG 0.610371 1_3:+60769232 None:intergenic
CCCAAGAACAGTGAACGCGT+TGG 0.613199 1_3:+60773352 None:intergenic
CAGTTGACTTAATCGAATGT+CGG 0.615405 1_3:+60768967 None:intergenic
CAGTTGACTTAATCGAATGT+CGG 0.615405 1_3:+60783147 None:intergenic
AATGCATCGATGAAAGGGTG+AGG 0.617026 1_3:+60770744 None:intergenic
TTTCATACGACGTGCAGCAG+AGG 0.618784 1_3:+60780219 None:intergenic
AGCTATCAAGAATCCGAGCA+AGG 0.619002 1_3:+60786575 None:intergenic
AGAAAGACATAGCAGAGGCA+TGG 0.620291 1_3:-60780667 Msa0130480:CDS
AATTCATCGATGAATGGATG+GGG 0.621875 1_3:+60784868 None:intergenic
CATTGCTTCTCATTGCGAGG+AGG 0.622091 1_3:+60784283 None:intergenic
GTATCATCTTGGAACAGAAG+AGG 0.624650 1_3:-60770331 Msa0130480:CDS
AGTAGCCATTCTTCTAACTG+AGG 0.625387 1_3:+60769298 None:intergenic
CCAGTCTCCGAAAAGGCACA+GGG 0.626166 1_3:-60769122 Msa0130480:CDS
ATTGAATTCACAGCAACTTG+CGG 0.627276 1_3:-60783458 Msa0130480:CDS
ATTCGCAATAGTTGCTTCCG+CGG 0.627295 1_3:+60770215 None:intergenic
GTTGTTAGGTAACACAAGAG+TGG 0.628897 1_3:-60784981 Msa0130480:intron
AAAAGCTGAGAAAACTAACT+GGG 0.630819 1_3:-60784491 Msa0130480:CDS
ATACCATCTTGGAACAGAAG+AGG 0.631271 1_3:-60784458 Msa0130480:CDS
TCCAGATGCACACCTTATAG+CGG 0.632029 1_3:+60773149 None:intergenic
TGGTTCGAAAGAAAAGAACC+TGG 0.632063 1_3:+60780457 None:intergenic
CAAGCTCTACATTGCCAGTG+TGG 0.632863 1_3:+60769002 None:intergenic
TATATGCAGACCATCGTGGT+TGG 0.636765 1_3:-60773193 Msa0130480:intron
TCAAGATGTTCCTGAAACCG+CGG 0.637589 1_3:-60770232 Msa0130480:CDS
AGTGAATCCAATAGATTCAG+TGG 0.638302 1_3:+60769184 None:intergenic
AGAGCAGTTAAAGAAAGACA+TGG 0.639913 1_3:-60769044 Msa0130480:CDS
CATATGTCGAAAGACTAGGC+TGG 0.640562 1_3:+60769080 None:intergenic
GTTGTTAGGTAACACAAGAG+TGG 0.643631 1_3:-60770857 Msa0130480:intron
AGAAACTCAAACTAATGAAG+GGG 0.644054 1_3:-60783509 Msa0130480:CDS
TATCCACCTGGCAAATGCTG+AGG 0.644206 1_3:+60770678 None:intergenic
ATAGTACTGGAAGTCGAAAG+CGG 0.647551 1_3:-60770521 Msa0130480:CDS
TGAGCATATACAGAAAGACT+AGG 0.654781 1_3:+60783355 None:intergenic
GCCTGAAGCATGGATGATGT+GGG 0.654883 1_3:+60773327 None:intergenic
ACTGATAAGAGGAGGTTCAG+TGG 0.655003 1_3:+60770164 None:intergenic
CTTATATATGCAGACCATCG+TGG 0.659760 1_3:-60773197 Msa0130480:intron
TCCGAAAATTGATCTACCGA+CGG 0.660122 1_3:-60769248 Msa0130480:CDS
TATATGTTTCCAGAGAATGG+AGG 0.668040 1_3:-60770387 Msa0130480:CDS
TGCCAAAATCTTGACCACAC+TGG 0.683464 1_3:-60769016 Msa0130480:CDS
CTTTGGTCCACCAACCACGA+TGG 0.684049 1_3:+60773183 None:intergenic
AAATTGGGACTGATAAGAGG+AGG 0.689769 1_3:+60770156 None:intergenic
AGGAGCTATATCGACTAGGG+TGG 0.690179 1_3:-60768829 Msa0130480:CDS
AAAGGAGAAAGACATAGCAG+AGG 0.700278 1_3:-60780672 Msa0130480:CDS
AAGACATAGCAGAGGCATGG+CGG 0.703822 1_3:-60780664 Msa0130480:CDS
GAGTGGCCTGGATTACCTAG+AGG 0.709350 1_3:-60784964 Msa0130480:CDS
AGTCCACCTGGTAAACGCTG+AGG 0.726794 1_3:+60784802 None:intergenic
TATATGACTCCAGAGAGTGG+AGG 0.733666 1_3:-60784514 Msa0130480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATATTAAATAAAAAT+TGG - chr1_3:60781812-60781831 Msa0130480:intron 0.0%
!! TTAAATATTAAATAAAAATT+GGG - chr1_3:60781813-60781832 Msa0130480:intron 0.0%
!! TTAAATAAAATATTAATATT+AGG - chr1_3:60784531-60784550 Msa0130480:CDS 0.0%
!! TAAATAAAATATTAATATTA+GGG - chr1_3:60784532-60784551 Msa0130480:CDS 0.0%
!!! AATTCAATTTGAAATTAAAA+TGG + chr1_3:60769141-60769160 None:intergenic 10.0%
!!! TTAATTTCAAATTGAATTTT+TGG - chr1_3:60769143-60769162 Msa0130480:CDS 10.0%
!! TTAAAATGAATTTAATGTAA+TGG + chr1_3:60773895-60773914 None:intergenic 10.0%
!! TTATAGTTTATTTATTACAA+CGG + chr1_3:60776414-60776433 None:intergenic 10.0%
!! ATATTTACTAAGAATTATTT+GGG - chr1_3:60776843-60776862 Msa0130480:intron 10.0%
!!! TCATTTTTCATTTTATTTTA+TGG - chr1_3:60777545-60777564 Msa0130480:intron 10.0%
!!! TTTTTTTGAAGAAAATAAAA+TGG + chr1_3:60778606-60778625 None:intergenic 10.0%
!! TTGGTAAAAAAAATATAATA+TGG + chr1_3:60779000-60779019 None:intergenic 10.0%
!!! TAATAATTTTATCAATTTGT+AGG - chr1_3:60780928-60780947 Msa0130480:intron 10.0%
!!! AAAATTGTTATTAAAATCAA+GGG + chr1_3:60781193-60781212 None:intergenic 10.0%
!!! TAAAATTGTTATTAAAATCA+AGG + chr1_3:60781194-60781213 None:intergenic 10.0%
!!! TTTAATAACAATTTTAAACA+AGG - chr1_3:60781198-60781217 Msa0130480:intron 10.0%
!! TGAAAATAATATTTAATATG+TGG + chr1_3:60781979-60781998 None:intergenic 10.0%
!! ATTTATTGTAAGAAATTAAA+TGG - chr1_3:60782383-60782402 Msa0130480:intron 10.0%
!! ATTATAGAAAAATAATGTTA+GGG + chr1_3:60785627-60785646 None:intergenic 10.0%
!! TATTATAGAAAAATAATGTT+AGG + chr1_3:60785628-60785647 None:intergenic 10.0%
!! ATAAAATGAATTTAACATAA+TGG + chr1_3:60788077-60788096 None:intergenic 10.0%
!!! ATCTTTTTCTTAATTTCAAA+TGG - chr1_3:60768937-60768956 Msa0130480:intron 15.0%
!!! TCTTTTTCTTAATTTCAAAT+GGG - chr1_3:60768938-60768957 Msa0130480:intron 15.0%
!!! AATAAAGCAAATAATTTTGA+AGG + chr1_3:60769095-60769114 None:intergenic 15.0%
!!! TATATATCAGTGATATTTTA+TGG - chr1_3:60770191-60770210 Msa0130480:CDS 15.0%
!! TCTATCATTATGTAAATAAT+AGG + chr1_3:60770537-60770556 None:intergenic 15.0%
!! AATCATTAAGAATTATTTAG+AGG - chr1_3:60771346-60771365 Msa0130480:intron 15.0%
!! ATCAAAAAAAAATTAAGTGT+TGG - chr1_3:60771492-60771511 Msa0130480:intron 15.0%
!!! GAAATATGTTATTTAATTTC+TGG - chr1_3:60771650-60771669 Msa0130480:intron 15.0%
!! TTAAGAATTTATTTCAATGA+AGG + chr1_3:60773159-60773178 None:intergenic 15.0%
!!! GCTTGTTTTTTTTTTTTAAT+AGG - chr1_3:60773952-60773971 Msa0130480:intron 15.0%
!!! TATATCATAGTTATTGTTTT+GGG + chr1_3:60774873-60774892 None:intergenic 15.0%
!!! TTATATCATAGTTATTGTTT+TGG + chr1_3:60774874-60774893 None:intergenic 15.0%
!! AAACAATAACTATGATATAA+AGG - chr1_3:60774874-60774893 Msa0130480:intron 15.0%
!! TTAAAATACTATTAAATCCA+TGG + chr1_3:60775216-60775235 None:intergenic 15.0%
!!! GGATTTAATAGTATTTTAAT+TGG - chr1_3:60775217-60775236 Msa0130480:intron 15.0%
!!! TTAATAGTATTTTAATTGGA+TGG - chr1_3:60775221-60775240 Msa0130480:intron 15.0%
!!! TAAAGTGTTTTTTAATCATT+TGG + chr1_3:60775306-60775325 None:intergenic 15.0%
!! TATCATTGCTAAAAAAAATT+AGG + chr1_3:60776826-60776845 None:intergenic 15.0%
!! GATATTTACTAAGAATTATT+TGG - chr1_3:60776842-60776861 Msa0130480:intron 15.0%
!! TTGGAAATTGTTAAATATTA+CGG + chr1_3:60777009-60777028 None:intergenic 15.0%
!!! ACAATTTCCAATTTTTTTAT+TGG - chr1_3:60777018-60777037 Msa0130480:intron 15.0%
!!! TGAAAATTTTAAGAAAATCA+TGG - chr1_3:60777214-60777233 Msa0130480:intron 15.0%
!! TAAATAATAGGAAAAAACAT+AGG + chr1_3:60777285-60777304 None:intergenic 15.0%
!! TGATAAATTGGATATAAATA+TGG + chr1_3:60777494-60777513 None:intergenic 15.0%
!! AGATTTAAAGATTGATAAAT+TGG + chr1_3:60777506-60777525 None:intergenic 15.0%
!!! TTTATATTTTTTGGTACAAT+CGG - chr1_3:60777939-60777958 Msa0130480:intron 15.0%
!! AAAAAGAAGTCAAATATATT+CGG + chr1_3:60778195-60778214 None:intergenic 15.0%
!!! AATATCTATTTGTTATTATC+TGG + chr1_3:60779030-60779049 None:intergenic 15.0%
!! CAACAATATTAAAATTTAGT+AGG + chr1_3:60779177-60779196 None:intergenic 15.0%
!!! ATATTGTTGTTATCATTTTT+TGG - chr1_3:60779188-60779207 Msa0130480:intron 15.0%
!!! TATTGTTGTTATCATTTTTT+GGG - chr1_3:60779189-60779208 Msa0130480:intron 15.0%
!! AAGATAATAGTAATAGTAAT+TGG + chr1_3:60779502-60779521 None:intergenic 15.0%
!!! TGTATTTTTAATGATGATTT+TGG + chr1_3:60779628-60779647 None:intergenic 15.0%
!! ATTGTTTATCTTAAAAAAGA+TGG + chr1_3:60779821-60779840 None:intergenic 15.0%
!! AAAGATACAAAAAAGTTATT+CGG - chr1_3:60779869-60779888 Msa0130480:intron 15.0%
!!! TGGTGTAATTTTTTAAAATT+GGG + chr1_3:60780016-60780035 None:intergenic 15.0%
!!! TTGGTGTAATTTTTTAAAAT+TGG + chr1_3:60780017-60780036 None:intergenic 15.0%
!!! CTTACTTTATTTAGAATATT+TGG + chr1_3:60780595-60780614 None:intergenic 15.0%
!! AATGAGTTACAAAAATTAAT+TGG - chr1_3:60780897-60780916 Msa0130480:intron 15.0%
!! ACAAATTAATTAATAGGAAT+AGG - chr1_3:60780985-60781004 Msa0130480:intron 15.0%
!!! ATTTAGAAACTAAAGAATTT+TGG + chr1_3:60781563-60781582 None:intergenic 15.0%
!!! ATTTAGAAACTAAAGAATTT+TGG + chr1_3:60781563-60781582 None:intergenic 15.0%
!!! AGATAATGAATTTTTTTTAC+AGG + chr1_3:60782293-60782312 None:intergenic 15.0%
!! AAAAAATTCATTATCTGAAA+TGG - chr1_3:60782297-60782316 Msa0130480:intron 15.0%
!!! AAAAATTCATTATCTGAAAT+GGG - chr1_3:60782298-60782317 Msa0130480:intron 15.0%
!!! AAATCAATTTGAAATTACAA+AGG + chr1_3:60782524-60782543 None:intergenic 15.0%
!!! TTGTAATTTCAAATTGATTT+TGG - chr1_3:60782524-60782543 Msa0130480:intron 15.0%
!! AACAAATCAAAGAAATTTAA+AGG + chr1_3:60784148-60784167 None:intergenic 15.0%
!!! ACACAGATTTTTATTTATAT+AGG + chr1_3:60785570-60785589 None:intergenic 15.0%
!! ATACAATAAGAAAATATTAG+TGG + chr1_3:60786958-60786977 None:intergenic 15.0%
!! AAAAGAATGTCTAAAAATAA+TGG + chr1_3:60787047-60787066 None:intergenic 15.0%
!!! GAGATTAATTTTAATAGTTT+TGG - chr1_3:60787594-60787613 Msa0130480:intron 15.0%
!!! TGCTTTATTTATTATAGAGA+AGG - chr1_3:60769028-60769047 Msa0130480:CDS 20.0%
!! TCATTATATGAGTTTAATAG+TGG - chr1_3:60769058-60769077 Msa0130480:CDS 20.0%
!! AGTTTATTGTTCAATAGATA+CGG - chr1_3:60769178-60769197 Msa0130480:CDS 20.0%
!! AATTGGTATAACTAATCAAA+GGG + chr1_3:60769681-60769700 None:intergenic 20.0%
!! ATAAGAAAATTAAGACAAGT+AGG + chr1_3:60770141-60770160 None:intergenic 20.0%
!! AATAAATTCAACTTATGATG+GGG + chr1_3:60770780-60770799 None:intergenic 20.0%
!! CAATAAATTCAACTTATGAT+GGG + chr1_3:60770781-60770800 None:intergenic 20.0%
!! TCAATAAATTCAACTTATGA+TGG + chr1_3:60770782-60770801 None:intergenic 20.0%
!! CTTTGAATCAAATACATTAA+AGG - chr1_3:60771381-60771400 Msa0130480:intron 20.0%
!!! AATTAAGTGTTGGAAAAAAA+AGG - chr1_3:60771502-60771521 Msa0130480:intron 20.0%
!! ATTAATGCACAAAGAATATA+TGG + chr1_3:60771549-60771568 None:intergenic 20.0%
!!! TATGTTATTTAATTTCTGGA+AGG - chr1_3:60771654-60771673 Msa0130480:intron 20.0%
!!! AAAAATGCCAATAAACTTTT+AGG + chr1_3:60771893-60771912 None:intergenic 20.0%
!!! TTTCAAAGTTTTATGTTGTT+AGG - chr1_3:60771996-60772015 Msa0130480:intron 20.0%
!! ATTTATCACTACTCTTAAAA+TGG - chr1_3:60772143-60772162 Msa0130480:intron 20.0%
!! GCTATATGATTATAAAATGT+AGG - chr1_3:60772267-60772286 Msa0130480:intron 20.0%
!!! TTCCAAATATTTAATTTACC+CGG - chr1_3:60773021-60773040 Msa0130480:intron 20.0%
!!! AAGTTGATATTTATTTGATG+TGG - chr1_3:60773099-60773118 Msa0130480:CDS 20.0%
!! AAAGCTGGTATTAAAAAATA+AGG + chr1_3:60773250-60773269 None:intergenic 20.0%
!!! GTGTTTAAATTTGATAGTTT+TGG - chr1_3:60773296-60773315 Msa0130480:intron 20.0%
!! AAGAACAAAATTATCAACAT+AGG + chr1_3:60773356-60773375 None:intergenic 20.0%
!!! AATGAATTTAATGTAATGGA+AGG + chr1_3:60773891-60773910 None:intergenic 20.0%
!!! GTTTTAAAAGATACATATGT+TGG - chr1_3:60774287-60774306 Msa0130480:intron 20.0%
!! TGTTAAAATCATGTGATATA+TGG - chr1_3:60774344-60774363 Msa0130480:intron 20.0%
!! AACAAGTCATTTATTGTTAT+AGG - chr1_3:60774578-60774597 Msa0130480:intron 20.0%
!! ATCAGTTTATAACATTTGTA+GGG + chr1_3:60774706-60774725 None:intergenic 20.0%
!! AATTATATTTACGTAAAAGC+TGG + chr1_3:60774730-60774749 None:intergenic 20.0%
!! ATAACAACTTATCTAATTTG+AGG - chr1_3:60774758-60774777 Msa0130480:intron 20.0%
!!! TGCAAATTTTTCTCTTTTTT+AGG - chr1_3:60774993-60775012 Msa0130480:intron 20.0%
!!! GCAAATTTTTCTCTTTTTTA+GGG - chr1_3:60774994-60775013 Msa0130480:intron 20.0%
!!! CAAATTTTTCTCTTTTTTAG+GGG - chr1_3:60774995-60775014 Msa0130480:intron 20.0%
!!! CTTGATAATAATACGAAAAT+TGG + chr1_3:60775514-60775533 None:intergenic 20.0%
!!! TTCGTATTATTATCAAGTTT+TGG - chr1_3:60775517-60775536 Msa0130480:intron 20.0%
!! TATGAGAATTGAATTATCAT+AGG - chr1_3:60776116-60776135 Msa0130480:intron 20.0%
!! TTAAGTTTGGATTAAGTATT+AGG + chr1_3:60776661-60776680 None:intergenic 20.0%
!! TTAACATTCGAAAAGAAATT+AGG + chr1_3:60776739-60776758 None:intergenic 20.0%
!! TGGAAATTGTTAAATATTAC+GGG + chr1_3:60777008-60777027 None:intergenic 20.0%
!!! CAATTTTTTTATTGGTTGTT+CGG - chr1_3:60777026-60777045 Msa0130480:intron 20.0%
!! AATAGGAAGAAAAAAAACTT+AGG - chr1_3:60777126-60777145 Msa0130480:intron 20.0%
!! AAAAACTTAGGTATTTACTT+CGG - chr1_3:60777138-60777157 Msa0130480:intron 20.0%
!! TCATCATTGCTATAAATAAT+AGG + chr1_3:60777297-60777316 None:intergenic 20.0%
!!! GTAAATAAGGTGTTTTTTTT+AGG + chr1_3:60777350-60777369 None:intergenic 20.0%
!!! GTATATTTTTTGTATGTTTG+AGG + chr1_3:60777395-60777414 None:intergenic 20.0%
!! AAAGTCAAGATAAAATGAAA+GGG - chr1_3:60777812-60777831 Msa0130480:intron 20.0%
!! CATAATGTGTTTAAATCATA+TGG - chr1_3:60778243-60778262 Msa0130480:intron 20.0%
!! AAATTAAACTTCAATCTTTC+TGG - chr1_3:60778368-60778387 Msa0130480:intron 20.0%
!!! TTGTTTTCTCTTATCATTTT+TGG - chr1_3:60778416-60778435 Msa0130480:intron 20.0%
!! TAAAATATATTCTCAGTCAT+AGG + chr1_3:60778925-60778944 None:intergenic 20.0%
!!! GTTATTATCTGGAAATATTT+TGG + chr1_3:60779019-60779038 None:intergenic 20.0%
!!! ATTGTTGTTATCATTTTTTG+GGG - chr1_3:60779190-60779209 Msa0130480:intron 20.0%
!! ATAAAAAATAACCAAGTGAT+TGG + chr1_3:60779403-60779422 None:intergenic 20.0%
!! TATCTTAAAAAAGATGGATA+AGG + chr1_3:60779815-60779834 None:intergenic 20.0%
!! AATATGTTATCGCTATTATT+CGG - chr1_3:60779948-60779967 Msa0130480:intron 20.0%
!!! TTTTTCAATTTTTTCTCCAT+CGG + chr1_3:60780688-60780707 None:intergenic 20.0%
!! ATGGAGAAAAAATTGAAAAA+TGG - chr1_3:60780688-60780707 Msa0130480:CDS 20.0%
!! ATAAAAGAGTAGAAAATGAT+TGG - chr1_3:60780774-60780793 Msa0130480:intron 20.0%
!! TAAAAGAGTAGAAAATGATT+GGG - chr1_3:60780775-60780794 Msa0130480:intron 20.0%
!!! ACTAAATTTGTTCAATTTGT+AGG - chr1_3:60780845-60780864 Msa0130480:intron 20.0%
!! AATAAAAAATGAGTACTTGA+AGG - chr1_3:60780956-60780975 Msa0130480:intron 20.0%
!! AGTCACACAAATTAATTAAT+AGG - chr1_3:60780979-60780998 Msa0130480:intron 20.0%
!! AATTAATTAATAGGAATAGG+CGG - chr1_3:60780988-60781007 Msa0130480:intron 20.0%
!! ATATGAGAGATTAATTAGAA+AGG - chr1_3:60781064-60781083 Msa0130480:intron 20.0%
!!! GAAATGATTATTTTTACTAG+TGG + chr1_3:60781171-60781190 None:intergenic 20.0%
!! AAGACAAGAAATATAACTAA+TGG - chr1_3:60781591-60781610 Msa0130480:intron 20.0%
!! AAGACAAGAAATATAACTAA+TGG - chr1_3:60781591-60781610 Msa0130480:intron 20.0%
!! TATTAAATAAAAATTGGGGA+AGG - chr1_3:60781818-60781837 Msa0130480:intron 20.0%
!! ATTAAATAAAAATTGGGGAA+GGG - chr1_3:60781819-60781838 Msa0130480:intron 20.0%
!!! AGTTTTGCCTTATAATTTTA+AGG + chr1_3:60781905-60781924 None:intergenic 20.0%
!!! TCAAAAGAAGTATAAACATA+TGG - chr1_3:60782102-60782121 Msa0130480:intron 20.0%
!!! TTCATATATGAAGTTTTAGT+GGG + chr1_3:60782255-60782274 None:intergenic 20.0%
!!! TGGAAATATCTTGATTTTTT+TGG - chr1_3:60782335-60782354 Msa0130480:intron 20.0%
!! ATTGTAAGAAATTAAATGGA+AGG - chr1_3:60782387-60782406 Msa0130480:intron 20.0%
!! AATATGGAAAAAACTTTCAA+TGG + chr1_3:60782416-60782435 None:intergenic 20.0%
!!! TATTGACTTTAATTTTCTCA+CGG + chr1_3:60782976-60782995 None:intergenic 20.0%
!! TGAGAAAATTAAAGTCAATA+AGG - chr1_3:60782976-60782995 Msa0130480:intron 20.0%
!!! TGTTTTAAATCATATTTCAC+TGG - chr1_3:60783975-60783994 Msa0130480:intron 20.0%
!!! TGTGATTTGTTAAATGAATA+TGG + chr1_3:60784080-60784099 None:intergenic 20.0%
!! AGAATGTAGAAGAAATTTAA+AGG + chr1_3:60784187-60784206 None:intergenic 20.0%
!! AAATAAATTGCTCAACTTAA+AGG + chr1_3:60784787-60784806 None:intergenic 20.0%
!! AATTGTAGATGGATAAATAA+AGG + chr1_3:60784851-60784870 None:intergenic 20.0%
!!! ACTTATTTTACTTAGAAGTT+AGG + chr1_3:60785599-60785618 None:intergenic 20.0%
!! TAAGAACAAAGATCAAAATT+GGG + chr1_3:60786015-60786034 None:intergenic 20.0%
!! ATAAGAACAAAGATCAAAAT+TGG + chr1_3:60786016-60786035 None:intergenic 20.0%
!! AAGAACAAAGATCAAATTAT+TGG + chr1_3:60786047-60786066 None:intergenic 20.0%
!! ATATATAAGTGTGATACTTT+AGG + chr1_3:60786091-60786110 None:intergenic 20.0%
!! TTTGAATAATTTCTGTTGTT+AGG - chr1_3:60786120-60786139 Msa0130480:intron 20.0%
!! ATTTATCACTACTCTTAAAA+TGG - chr1_3:60772143-60772162 Msa0130480:intron 20.0%
!! GCTATATGATTAAACAATAT+AGG - chr1_3:60786394-60786413 Msa0130480:intron 20.0%
!!! TGACATGAAATATTAATTTG+TGG - chr1_3:60787092-60787111 Msa0130480:CDS 20.0%
!!! TTTTCTTGTGTAAATGAATT+AGG - chr1_3:60787141-60787160 Msa0130480:intron 20.0%
!! ATAGCTCACTATATTTATTT+AGG + chr1_3:60787281-60787300 None:intergenic 20.0%
!!! ATTTTAATAGTTTTGGTTTG+TGG - chr1_3:60787601-60787620 Msa0130480:intron 20.0%
!! AAATATGAAAATAACCTAAG+TGG - chr1_3:60787624-60787643 Msa0130480:intron 20.0%
! TAAAGAAATTCAAAAAAGCG+AGG + chr1_3:60768987-60769006 None:intergenic 25.0%
!! CTTTATTTAATGTCCAACAT+TGG - chr1_3:60769108-60769127 Msa0130480:CDS 25.0%
!! TGTTGATCAAGGTTTTTATA+TGG - chr1_3:60769212-60769231 Msa0130480:CDS 25.0%
!!! TAGATTTTAATGTAGCATCA+TGG + chr1_3:60769327-60769346 None:intergenic 25.0%
! TTAGAAATCTCATAATCAGA+AGG + chr1_3:60769552-60769571 None:intergenic 25.0%
! ATGTAGAAGTAAAACATGTT+TGG + chr1_3:60769583-60769602 None:intergenic 25.0%
! ATTGGTATAACTAATCAAAG+GGG + chr1_3:60769680-60769699 None:intergenic 25.0%
! CAATTGGTATAACTAATCAA+AGG + chr1_3:60769682-60769701 None:intergenic 25.0%
!! TTGATTAGTTATACCAATTG+TGG - chr1_3:60769682-60769701 Msa0130480:intron 25.0%
! ATAAGATTTCCACTATTACA+AGG + chr1_3:60769768-60769787 None:intergenic 25.0%
!! TTTGTTCTAGATATTGCATT+TGG - chr1_3:60770058-60770077 Msa0130480:intron 25.0%
!! AACTAGAAAAAGTGTAGATT+AGG - chr1_3:60770275-60770294 Msa0130480:CDS 25.0%
! CATTATAGTAGATTCAACTA+AGG + chr1_3:60770301-60770320 None:intergenic 25.0%
! CTATAATGAAAGAAAAAGTG+AGG - chr1_3:60770313-60770332 Msa0130480:CDS 25.0%
!!! ATAATTGTTTTAGAACCATG+GGG + chr1_3:60770964-60770983 None:intergenic 25.0%
!!! GATAATTGTTTTAGAACCAT+GGG + chr1_3:60770965-60770984 None:intergenic 25.0%
!! AATCTCTTTTATCCAACATT+TGG + chr1_3:60771101-60771120 None:intergenic 25.0%
!!! AACACTTTTTTCCTTCTAAA+TGG - chr1_3:60771167-60771186 Msa0130480:intron 25.0%
!!! ACACTTTTTTCCTTCTAAAT+GGG - chr1_3:60771168-60771187 Msa0130480:intron 25.0%
! TATCGTGTATTACATCAAAT+GGG + chr1_3:60771209-60771228 None:intergenic 25.0%
! CTATTGATCTATCACTTATT+TGG + chr1_3:60771289-60771308 None:intergenic 25.0%
! CAATTACTTTCTCATTCATA+GGG + chr1_3:60771440-60771459 None:intergenic 25.0%
! TCAATTACTTTCTCATTCAT+AGG + chr1_3:60771441-60771460 None:intergenic 25.0%
! ATGAGAAAGTAATTGATTGT+TGG - chr1_3:60771445-60771464 Msa0130480:intron 25.0%
!! ATTTCGTCTAAAATCACATT+AGG - chr1_3:60771567-60771586 Msa0130480:intron 25.0%
! ATTTGTATCGTTCAATTTCT+TGG - chr1_3:60771592-60771611 Msa0130480:intron 25.0%
! TTTGTATCGTTCAATTTCTT+GGG - chr1_3:60771593-60771612 Msa0130480:intron 25.0%
!! TTATTTAATTTCTGGAAGGA+AGG - chr1_3:60771658-60771677 Msa0130480:intron 25.0%
! ACTATATACAAGACATCAAT+CGG - chr1_3:60771742-60771761 Msa0130480:intron 25.0%
! GTATCACTGTTATAAAAACA+GGG + chr1_3:60771839-60771858 None:intergenic 25.0%
! AGTATCACTGTTATAAAAAC+AGG + chr1_3:60771840-60771859 None:intergenic 25.0%
!!! GTCTAAGCTTTATTCAAATT+TGG - chr1_3:60772212-60772231 Msa0130480:intron 25.0%
!!! AAGCTTTATTCAAATTTGGA+TGG - chr1_3:60772216-60772235 Msa0130480:intron 25.0%
!! AAAATATGTGGTCAAGATTT+TGG - chr1_3:60772369-60772388 Msa0130480:intron 25.0%
!!! TGTATGTTTTCCTTTGTTTT+TGG - chr1_3:60772804-60772823 Msa0130480:intron 25.0%
!!! AACGTTTTAAGCATTTAATG+TGG - chr1_3:60772909-60772928 Msa0130480:intron 25.0%
! AACCGGGTAAATTAAATATT+TGG + chr1_3:60773026-60773045 None:intergenic 25.0%
! ATCAGCATAATTCATTAAAC+CGG + chr1_3:60773043-60773062 None:intergenic 25.0%
!!! ATTATGCTGATTTGATTAGA+AGG - chr1_3:60773052-60773071 Msa0130480:intron 25.0%
! TTGATATTTATTTGATGTGG+TGG - chr1_3:60773102-60773121 Msa0130480:CDS 25.0%
!!! TTTTTAATACCAGCTTTGAA+TGG - chr1_3:60773253-60773272 Msa0130480:intron 25.0%
!!! TTTTAATACCAGCTTTGAAT+GGG - chr1_3:60773254-60773273 Msa0130480:intron 25.0%
! ATAGAAACTCAAACTAATGA+AGG - chr1_3:60773480-60773499 Msa0130480:intron 25.0%
! TAGAAACTCAAACTAATGAA+GGG - chr1_3:60773481-60773500 Msa0130480:intron 25.0%
! CATCACAAATAGAGAAAATT+TGG + chr1_3:60773928-60773947 None:intergenic 25.0%
!!! ATTTTGCAATTTTGAAGTAG+TGG - chr1_3:60774086-60774105 Msa0130480:intron 25.0%
! TATAGTAGTATGTTTCATCT+AGG - chr1_3:60774169-60774188 Msa0130480:intron 25.0%
! ATTGAAAAAGTTTGACTAGT+GGG + chr1_3:60774528-60774547 None:intergenic 25.0%
! CATCAGTTTATAACATTTGT+AGG + chr1_3:60774707-60774726 None:intergenic 25.0%
! TTATCTAATTTGAGGATCAA+AGG - chr1_3:60774766-60774785 Msa0130480:intron 25.0%
! ACACTTTACTAATCAAAAAC+AGG + chr1_3:60774902-60774921 None:intergenic 25.0%
!!! TGTTTTTGATTAGTAAAGTG+TGG - chr1_3:60774901-60774920 Msa0130480:intron 25.0%
!!! AATTGTTGGAGTTTTATTCA+GGG + chr1_3:60774974-60774993 None:intergenic 25.0%
! AGAGAAAAATTTGCAATTGT+TGG + chr1_3:60774988-60775007 None:intergenic 25.0%
! ATATAAGAAGGTTGTTCTAT+AGG + chr1_3:60775038-60775057 None:intergenic 25.0%
! ATAGATCATGAGATATAAGA+AGG + chr1_3:60775050-60775069 None:intergenic 25.0%
! ATTAAATCCATGGTTGTAAA+GGG + chr1_3:60775206-60775225 None:intergenic 25.0%
! TATTAAATCCATGGTTGTAA+AGG + chr1_3:60775207-60775226 None:intergenic 25.0%
!!! TGTTTTTTAATCATTTGGTG+GGG + chr1_3:60775301-60775320 None:intergenic 25.0%
!!! GTGTTTTTTAATCATTTGGT+GGG + chr1_3:60775302-60775321 None:intergenic 25.0%
!!! AGTGTTTTTTAATCATTTGG+TGG + chr1_3:60775303-60775322 None:intergenic 25.0%
! ATCAAATTGAATGGTGATAA+AGG + chr1_3:60775482-60775501 None:intergenic 25.0%
! AGAGTATGAATCAAATTGAA+TGG + chr1_3:60775491-60775510 None:intergenic 25.0%
!! TAATCCAAGTATGTTGTTTA+AGG + chr1_3:60775734-60775753 None:intergenic 25.0%
! AGGAATATTAAGTGTAAAGA+TGG + chr1_3:60775935-60775954 None:intergenic 25.0%
! TTGAAATTTATGCCTTCTAA+GGG - chr1_3:60776078-60776097 Msa0130480:intron 25.0%
! AATTATCATAGGATAAAACG+TGG - chr1_3:60776127-60776146 Msa0130480:intron 25.0%
!! TATCATTGTATTTTCATACG+AGG + chr1_3:60776228-60776247 None:intergenic 25.0%
! ATACACTTCTTATAGTTACT+TGG - chr1_3:60776570-60776589 Msa0130480:intron 25.0%
!! GAAGGATAAGAATTTAAGTT+TGG + chr1_3:60776674-60776693 None:intergenic 25.0%
! TCATAAAGTAATTCAGTTGA+AGG + chr1_3:60776692-60776711 None:intergenic 25.0%
! CTGAATTACTTTATGATTGT+AGG - chr1_3:60776696-60776715 Msa0130480:intron 25.0%
! AATAGAAGATTTGACCAATT+AGG - chr1_3:60776889-60776908 Msa0130480:intron 25.0%
! CGAACAACCAATAAAAAAAT+TGG + chr1_3:60777028-60777047 None:intergenic 25.0%
!!! TGGTATTGATATCTTAGATT+TGG + chr1_3:60777097-60777116 None:intergenic 25.0%
! CAATACCAGATACAAATAAT+AGG - chr1_3:60777109-60777128 Msa0130480:intron 25.0%
! TTCTTCCTATTATTTGTATC+TGG + chr1_3:60777117-60777136 None:intergenic 25.0%
!! ATGTGATGTTTTTCATTCTT+TGG + chr1_3:60777325-60777344 None:intergenic 25.0%
!! AACACCTTATTTACAATTAG+AGG - chr1_3:60777356-60777375 Msa0130480:intron 25.0%
! AAGTCGAAGGTTAATTAAAT+GGG + chr1_3:60777703-60777722 None:intergenic 25.0%
! AATATATGAAATCAAGTCGA+AGG + chr1_3:60777716-60777735 None:intergenic 25.0%
! CAAAGTCAAGATAAAATGAA+AGG - chr1_3:60777811-60777830 Msa0130480:intron 25.0%
! TATGATTGAACACATTGTAT+TGG + chr1_3:60778026-60778045 None:intergenic 25.0%
!! AATATTGTTTAGGGTTACAA+GGG + chr1_3:60778084-60778103 None:intergenic 25.0%
!! TAATATTGTTTAGGGTTACA+AGG + chr1_3:60778085-60778104 None:intergenic 25.0%
! CGAGAAACTAATATTGTTTA+GGG + chr1_3:60778093-60778112 None:intergenic 25.0%
! ACGAGAAACTAATATTGTTT+AGG + chr1_3:60778094-60778113 None:intergenic 25.0%
! TGATAAGAGAAAACAAAGAT+AGG + chr1_3:60778412-60778431 None:intergenic 25.0%
!!! TTTTCTCTTATCATTTTTGG+TGG - chr1_3:60778419-60778438 Msa0130480:intron 25.0%
! ATAGGATACAAAACAAAAAG+TGG + chr1_3:60778500-60778519 None:intergenic 25.0%
! AAGTTACATCAGAAAATCAT+AGG + chr1_3:60778518-60778537 None:intergenic 25.0%
!! TGTTAAAATGGTCTTAGTAT+TGG + chr1_3:60778671-60778690 None:intergenic 25.0%
! AGATATTGAACGAGAAAATA+AGG + chr1_3:60778841-60778860 None:intergenic 25.0%
! GAAGATAACCTAATAATCTA+GGG - chr1_3:60779270-60779289 Msa0130480:intron 25.0%
! TGATTAATGAGATCAAACAA+AGG + chr1_3:60779373-60779392 None:intergenic 25.0%
! ATAAGCAGAGTCAAATTAAA+GGG + chr1_3:60779442-60779461 None:intergenic 25.0%
! AATAAGCAGAGTCAAATTAA+AGG + chr1_3:60779443-60779462 None:intergenic 25.0%
! TCTTAGAAATAACACTTCTT+AGG + chr1_3:60779659-60779678 None:intergenic 25.0%
! TGATATGATTCAAATCACAT+GGG - chr1_3:60779739-60779758 Msa0130480:intron 25.0%
! ATATGTTATCGCTATTATTC+GGG - chr1_3:60779949-60779968 Msa0130480:intron 25.0%
!! ACATGATCATGAGATTATTT+TGG - chr1_3:60780243-60780262 Msa0130480:CDS 25.0%
! AATCAAAGTAGAATGCATTT+AGG + chr1_3:60780275-60780294 None:intergenic 25.0%
! GCTCAATTTATTCTCTTATA+TGG + chr1_3:60780408-60780427 None:intergenic 25.0%
! AAATTACATAACCAAACCAT+AGG - chr1_3:60780454-60780473 Msa0130480:CDS 25.0%
! TGCATATGAAGGAAATAAAA+AGG + chr1_3:60780520-60780539 None:intergenic 25.0%
! TCATAGAAGAAACAACAAAT+AGG - chr1_3:60780560-60780579 Msa0130480:intron 25.0%
! GAAATATTACGAAAGAACAT+AGG - chr1_3:60780623-60780642 Msa0130480:intron 25.0%
! GAGAAAAAATTGAAAAATGG+TGG - chr1_3:60780691-60780710 Msa0130480:CDS 25.0%
! AAAAGAGTAGAAAATGATTG+GGG - chr1_3:60780776-60780795 Msa0130480:intron 25.0%
! CTCTATATACATGTATTCTA+AGG + chr1_3:60781126-60781145 None:intergenic 25.0%
! TTAAATAAAAATTGGGGAAG+GGG - chr1_3:60781820-60781839 Msa0130480:intron 25.0%
! ACATTGTTATGATACATTTG+AGG + chr1_3:60781946-60781965 None:intergenic 25.0%
!!! CTTCATATATGAAGTTTTAG+TGG + chr1_3:60782256-60782275 None:intergenic 25.0%
!!! GAATTTTTTTTACAGGACAT+CGG + chr1_3:60782286-60782305 None:intergenic 25.0%
! TAATTGACTACAATTTACTC+TGG + chr1_3:60782668-60782687 None:intergenic 25.0%
! AGAGTAAATTGTAGTCAATT+AGG - chr1_3:60782667-60782686 Msa0130480:intron 25.0%
!! ATTTTAAATCTTGACCTCTA+TGG + chr1_3:60782726-60782745 None:intergenic 25.0%
! TGAACAAATTGTAGTCAATT+AGG - chr1_3:60783215-60783234 Msa0130480:CDS 25.0%
!! TTTAAAGGAATGTTGATGAA+AGG + chr1_3:60784133-60784152 None:intergenic 25.0%
! GGAAAATAGAAAATAAATGG+AGG + chr1_3:60784634-60784653 None:intergenic 25.0%
! GTGGGAAAATAGAAAATAAA+TGG + chr1_3:60784637-60784656 None:intergenic 25.0%
! ATGGCTCTTAATATTATTTG+TGG - chr1_3:60784727-60784746 Msa0130480:intron 25.0%
! TCCATCTACAATTGAAAAAA+AGG - chr1_3:60784858-60784877 Msa0130480:CDS 25.0%
!!! ACCTTTTTTTCAATTGTAGA+TGG + chr1_3:60784862-60784881 None:intergenic 25.0%
! AAAACAATGATGATCAATGA+GGG + chr1_3:60784921-60784940 None:intergenic 25.0%
!! CTCAACAGTAAATTTGAAAT+CGG - chr1_3:60785217-60785236 Msa0130480:intron 25.0%
!! TCAACAGTAAATTTGAAATC+GGG - chr1_3:60785218-60785237 Msa0130480:intron 25.0%
! AAGGATGTTGTATTTGATAT+GGG + chr1_3:60785311-60785330 None:intergenic 25.0%
! TTTGTGCTTCATAAAAACTA+TGG - chr1_3:60785380-60785399 Msa0130480:intron 25.0%
! ATGCAGTTATATCGATATTA+GGG + chr1_3:60785657-60785676 None:intergenic 25.0%
! AAGAGGGAAAGAAAAAAAAA+GGG + chr1_3:60785704-60785723 None:intergenic 25.0%
! AATTTATTCCTGTGTGATTA+GGG - chr1_3:60785783-60785802 Msa0130480:intron 25.0%
! CTAAATCATTCACAATGATT+TGG + chr1_3:60785911-60785930 None:intergenic 25.0%
! ATGCTATAATGTCATGTATT+TGG + chr1_3:60785962-60785981 None:intergenic 25.0%
! AAATACATGACATTATAGCA+TGG - chr1_3:60785961-60785980 Msa0130480:intron 25.0%
!!! TGTATCTTTTGCTTTGTTTT+TGG - chr1_3:60786973-60786992 Msa0130480:intron 25.0%
!! ACATTCTTTTGCTTTCTTAT+TGG - chr1_3:60787057-60787076 Msa0130480:CDS 25.0%
!! AATAGTTTAGCTTAAGACTA+GGG - chr1_3:60787167-60787186 Msa0130480:intron 25.0%
! CACATAATTCTTGTAATCAA+GGG + chr1_3:60787547-60787566 None:intergenic 25.0%
! TCACATAATTCTTGTAATCA+AGG + chr1_3:60787548-60787567 None:intergenic 25.0%
! TTACAAGAATTATGTGACTA+TGG - chr1_3:60787551-60787570 Msa0130480:CDS 25.0%
! TACAAGAATTATGTGACTAT+GGG - chr1_3:60787552-60787571 Msa0130480:CDS 25.0%
! AAGAACAAAATTATCCACTT+AGG + chr1_3:60787641-60787660 None:intergenic 25.0%
! TAGAAACTCAATTTCATGTA+GGG - chr1_3:60787766-60787785 Msa0130480:intron 25.0%
ACTGTTGATACTAAAGTAAG+AGG + chr1_3:60768908-60768927 None:intergenic 30.0%
! TGATCAAGGTTTTTATATGG+CGG - chr1_3:60769215-60769234 Msa0130480:CDS 30.0%
!!! GCGGTTGCAATTTTTTTTAT+TGG - chr1_3:60769391-60769410 Msa0130480:intron 30.0%
TCAGAAGGAATTATCATAGT+GGG + chr1_3:60769537-60769556 None:intergenic 30.0%
ATCAGAAGGAATTATCATAG+TGG + chr1_3:60769538-60769557 None:intergenic 30.0%
CTTATCTTAGTGTCTACAAT+TGG + chr1_3:60769647-60769666 None:intergenic 30.0%
TTGGTATAACTAATCAAAGG+GGG + chr1_3:60769679-60769698 None:intergenic 30.0%
CTCAAATAAAAAGCCACAAT+TGG + chr1_3:60769698-60769717 None:intergenic 30.0%
AAGCAACCGAAAAAGTTATA+TGG - chr1_3:60769918-60769937 Msa0130480:intron 30.0%
AGCAACCGAAAAAGTTATAT+GGG - chr1_3:60769919-60769938 Msa0130480:intron 30.0%
! GCTTTCCCATATAACTTTTT+CGG + chr1_3:60769927-60769946 None:intergenic 30.0%
CGATAACATGTTGACAATTT+GGG + chr1_3:60769967-60769986 None:intergenic 30.0%
TCGATAACATGTTGACAATT+TGG + chr1_3:60769968-60769987 None:intergenic 30.0%
TGCTTTCAATTGTATTTCAG+TGG - chr1_3:60770026-60770045 Msa0130480:intron 30.0%
! AATAGATTCAGGAATTTTCC+TGG + chr1_3:60770820-60770839 None:intergenic 30.0%
!! GAATAAACTTTGAGATGAAG+TGG + chr1_3:60770926-60770945 None:intergenic 30.0%
!!! GGATAATTGTTTTAGAACCA+TGG + chr1_3:60770966-60770985 None:intergenic 30.0%
AAGAGATTGCACAAACAATT+AGG - chr1_3:60771113-60771132 Msa0130480:intron 30.0%
!! TAGAAGGAAAAAAGTGTTTC+TGG + chr1_3:60771165-60771184 None:intergenic 30.0%
CTATCGTGTATTACATCAAA+TGG + chr1_3:60771210-60771229 None:intergenic 30.0%
AGATCAATAGTTAGAGATAG+AGG - chr1_3:60771299-60771318 Msa0130480:intron 30.0%
GATCAATAGTTAGAGATAGA+GGG - chr1_3:60771300-60771319 Msa0130480:intron 30.0%
TTGGTTGACATATTACACAA+TGG - chr1_3:60771464-60771483 Msa0130480:intron 30.0%
! AGTGTTGGAAAAAAAAGGAA+CGG - chr1_3:60771507-60771526 Msa0130480:intron 30.0%
TTGTATCGTTCAATTTCTTG+GGG - chr1_3:60771594-60771613 Msa0130480:intron 30.0%
ATAAGAAACTGCATGGAAAT+AGG + chr1_3:60771701-60771720 None:intergenic 30.0%
AGTTACAATAAGAAACTGCA+TGG + chr1_3:60771708-60771727 None:intergenic 30.0%
GATTGATGTCTTGTATATAG+TGG + chr1_3:60771743-60771762 None:intergenic 30.0%
TATCTGTGACTTCAGATATA+AGG + chr1_3:60771865-60771884 None:intergenic 30.0%
TACCTGTCCTAAAAGTTTAT+TGG - chr1_3:60771883-60771902 Msa0130480:intron 30.0%
CATATTATCTCTTGATCAGA+TGG + chr1_3:60772066-60772085 None:intergenic 30.0%
CATCTGATCAAGAGATAATA+TGG - chr1_3:60772064-60772083 Msa0130480:intron 30.0%
AAATTCATCGATGAATGGAT+GGG + chr1_3:60772127-60772146 None:intergenic 30.0%
TAAATTCATCGATGAATGGA+TGG + chr1_3:60772128-60772147 None:intergenic 30.0%
GTGATAAATTCATCGATGAA+TGG + chr1_3:60772132-60772151 None:intergenic 30.0%
ACTACTCTTAAAATGGATGA+TGG - chr1_3:60772150-60772169 Msa0130480:intron 30.0%
GAAAGGCTGTAAAAAGATTA+TGG - chr1_3:60772449-60772468 Msa0130480:intron 30.0%
AAAAGCTGAGAAAACTAACT+GGG - chr1_3:60772500-60772519 Msa0130480:intron 30.0%
TATGATGAGATTCTTGTTCT+TGG + chr1_3:60772746-60772765 None:intergenic 30.0%
ATACAACACGAAAATGTTAG+TGG + chr1_3:60772789-60772808 None:intergenic 30.0%
!!! TTTTCCTTTGTTTTTGGAAG+AGG - chr1_3:60772810-60772829 Msa0130480:intron 30.0%
!!! TTTCCTTTGTTTTTGGAAGA+GGG - chr1_3:60772811-60772830 Msa0130480:intron 30.0%
AGATGTTAAACTCATAATGC+TGG - chr1_3:60772959-60772978 Msa0130480:intron 30.0%
TCTGACACAATATTCATTTG+TGG - chr1_3:60772992-60773011 Msa0130480:intron 30.0%
TCAGCATAATTCATTAAACC+GGG + chr1_3:60773042-60773061 None:intergenic 30.0%
ATTTATTTCAATGAAGGCAG+CGG + chr1_3:60773153-60773172 None:intergenic 30.0%
! TGTACTGTATAGTTTAGCTT+AGG - chr1_3:60773202-60773221 Msa0130480:intron 30.0%
AGAAACTCAAACTAATGAAG+GGG - chr1_3:60773482-60773501 Msa0130480:intron 30.0%
AATTCAATAAATTCTGCGAC+AGG + chr1_3:60773521-60773540 None:intergenic 30.0%
CTTTCTGTATATGCTCATTT+AGG - chr1_3:60773642-60773661 Msa0130480:intron 30.0%
TAGACAATGCATTTGTCTTT+GGG + chr1_3:60774314-60774333 None:intergenic 30.0%
TTTCAATTTCATGATCTGCA+AGG + chr1_3:60774406-60774425 None:intergenic 30.0%
TTGAAAAAGTTTGACTAGTG+GGG + chr1_3:60774527-60774546 None:intergenic 30.0%
GATTGAAAAAGTTTGACTAG+TGG + chr1_3:60774529-60774548 None:intergenic 30.0%
TCATTTATTGTTATAGGCCT+TGG - chr1_3:60774584-60774603 Msa0130480:intron 30.0%
! TTTTTCCATTCGTCTAATTC+CGG - chr1_3:60774637-60774656 Msa0130480:intron 30.0%
TACTGATCTTAGTCGATAAA+AGG + chr1_3:60774666-60774685 None:intergenic 30.0%
!!! CAATTGTTGGAGTTTTATTC+AGG + chr1_3:60774975-60774994 None:intergenic 30.0%
! TTCAAGTTCAATCCTTATTG+TGG - chr1_3:60775072-60775091 Msa0130480:intron 30.0%
!! TTCAAAAGTATGTGCCTTTT+GGG - chr1_3:60775120-60775139 Msa0130480:intron 30.0%
!!! AAACTCTTTTTTCCCATGAT+GGG - chr1_3:60775174-60775193 Msa0130480:intron 30.0%
!! TTGGTAATTGTTGCAACTTT+TGG - chr1_3:60775258-60775277 Msa0130480:intron 30.0%
ATCTACAACCTTCTTAATCA+TGG - chr1_3:60775379-60775398 Msa0130480:intron 30.0%
ATTTGCAACCATGATTAAGA+AGG + chr1_3:60775390-60775409 None:intergenic 30.0%
GAAATTGAAAGCAATCTTCA+TGG + chr1_3:60775423-60775442 None:intergenic 30.0%
ATTGAATGGTGATAAAGGTT+TGG + chr1_3:60775477-60775496 None:intergenic 30.0%
! TCATTTTCCTTCTCTCTAAA+AGG - chr1_3:60775604-60775623 Msa0130480:intron 30.0%
!! TTTTGTACCTTTTAGAGAGA+AGG + chr1_3:60775614-60775633 None:intergenic 30.0%
! CTCTCTAAAAGGTACAAAAA+TGG - chr1_3:60775615-60775634 Msa0130480:intron 30.0%
! TCTAAAAGGTACAAAAATGG+TGG - chr1_3:60775618-60775637 Msa0130480:intron 30.0%
TACAAAAATGGTGGTTATGA+AGG - chr1_3:60775627-60775646 Msa0130480:intron 30.0%
TCGTTGTTAATCTCAGTAAA+GGG + chr1_3:60775696-60775715 None:intergenic 30.0%
ATCGTTGTTAATCTCAGTAA+AGG + chr1_3:60775697-60775716 None:intergenic 30.0%
ATCACCTTAAACAACATACT+TGG - chr1_3:60775727-60775746 Msa0130480:intron 30.0%
! ACAACATACTTGGATTAGAA+AGG - chr1_3:60775737-60775756 Msa0130480:intron 30.0%
! CAACATACTTGGATTAGAAA+GGG - chr1_3:60775738-60775757 Msa0130480:intron 30.0%
! AACATACTTGGATTAGAAAG+GGG - chr1_3:60775739-60775758 Msa0130480:intron 30.0%
!!! AAGCCAGATTGTTTTTTGTT+TGG - chr1_3:60775811-60775830 Msa0130480:intron 30.0%
GTTGAAATTTATGCCTTCTA+AGG - chr1_3:60776077-60776096 Msa0130480:intron 30.0%
! TACTAATCTTTTCCCTTAGA+AGG + chr1_3:60776093-60776112 None:intergenic 30.0%
AAAACAAACCAACAATGTCA+CGG + chr1_3:60776638-60776657 None:intergenic 30.0%
TTACTAAGAATTATTTGGGC+AGG - chr1_3:60776847-60776866 Msa0130480:intron 30.0%
!!! GGTCAAATCTTCTATTTTTG+TGG + chr1_3:60776885-60776904 None:intergenic 30.0%
AGATTTGACCAATTAGGTTA+TGG - chr1_3:60776895-60776914 Msa0130480:intron 30.0%
TTGTCTAACAAGGAAACAAA+AGG - chr1_3:60777071-60777090 Msa0130480:intron 30.0%
! ACCTTATTTACAATTAGAGG+AGG - chr1_3:60777359-60777378 Msa0130480:intron 30.0%
ACCTCCTCTAATTGTAAATA+AGG + chr1_3:60777363-60777382 None:intergenic 30.0%
GATAATAGGTCAAATCATCT+AGG + chr1_3:60777575-60777594 None:intergenic 30.0%
ACAACATTAGAAAGAGAGTT+GGG + chr1_3:60777609-60777628 None:intergenic 30.0%
AGATAAAAGGATGTTGTGTT+AGG + chr1_3:60777668-60777687 None:intergenic 30.0%
CAAGTCGAAGGTTAATTAAA+TGG + chr1_3:60777704-60777723 None:intergenic 30.0%
!!! GTTATGCTATTTTGTACGAA+TGG - chr1_3:60777746-60777765 Msa0130480:intron 30.0%
! CTATTTTGTACGAATGGTTT+GGG - chr1_3:60777752-60777771 Msa0130480:intron 30.0%
CAATCGGTACAAAAATCAAA+TGG - chr1_3:60777955-60777974 Msa0130480:intron 30.0%
!! TCTTAGTATTGATATAGTGG+TGG + chr1_3:60778131-60778150 None:intergenic 30.0%
!! TGGTCTTAGTATTGATATAG+TGG + chr1_3:60778134-60778153 None:intergenic 30.0%
AGTCAAATATATTCGGTCAT+AGG + chr1_3:60778188-60778207 None:intergenic 30.0%
! ATATGGCTTTTAACCTCATA+TGG - chr1_3:60778260-60778279 Msa0130480:intron 30.0%
TTAAACTTCAATCTTTCTGG+TGG - chr1_3:60778371-60778390 Msa0130480:intron 30.0%
! TTGAACTCTTTACCTTGTTT+GGG - chr1_3:60778442-60778461 Msa0130480:intron 30.0%
TTTGGGCATCTATTTGTAAT+AGG - chr1_3:60778459-60778478 Msa0130480:intron 30.0%
TTGGGCATCTATTTGTAATA+GGG - chr1_3:60778460-60778479 Msa0130480:intron 30.0%
TAACTTGATACTCTTTAAGC+TGG - chr1_3:60778532-60778551 Msa0130480:intron 30.0%
!!! TACTCTTTAAGCTGGTTTTT+TGG - chr1_3:60778540-60778559 Msa0130480:intron 30.0%
!! TCTTAGTATTGGTATAATGG+TGG + chr1_3:60778660-60778679 None:intergenic 30.0%
!! TGGTCTTAGTATTGGTATAA+TGG + chr1_3:60778663-60778682 None:intergenic 30.0%
ATTGAACGAGAAAATAAGGT+TGG + chr1_3:60778837-60778856 None:intergenic 30.0%
! TGTTAACCATCTAGTTTCTA+GGG - chr1_3:60779247-60779266 Msa0130480:intron 30.0%
GGAAGATAACCTAATAATCT+AGG - chr1_3:60779269-60779288 Msa0130480:intron 30.0%
! GTATAGACTTTTTACCTCAT+GGG + chr1_3:60779300-60779319 None:intergenic 30.0%
! TGTATAGACTTTTTACCTCA+TGG + chr1_3:60779301-60779320 None:intergenic 30.0%
AAACAAAGGATGAATTGTTC+CGG + chr1_3:60779359-60779378 None:intergenic 30.0%
ATAACACTTCTTAGGAGTAA+TGG + chr1_3:60779651-60779670 None:intergenic 30.0%
!! TCTAAGAAGTGTTAGATTAG+TGG - chr1_3:60779690-60779709 Msa0130480:intron 30.0%
GTGATATGATTCAAATCACA+TGG - chr1_3:60779738-60779757 Msa0130480:intron 30.0%
TTTATTGTGCTTTCTACAAG+AGG + chr1_3:60780049-60780068 None:intergenic 30.0%
GATGACAAGTCTAACATAAA+TGG + chr1_3:60780097-60780116 None:intergenic 30.0%
TTAACATAAATCGTTGCATG+TGG + chr1_3:60780167-60780186 None:intergenic 30.0%
TTTGTACCAAAATCATCCTA+TGG + chr1_3:60780473-60780492 None:intergenic 30.0%
TTCAAACTCAATGCATATGA+AGG + chr1_3:60780531-60780550 None:intergenic 30.0%
ATATAGTGGTCAAAACAAAG+CGG - chr1_3:60780722-60780741 Msa0130480:intron 30.0%
AAAGAGTAGAAAATGATTGG+GGG - chr1_3:60780777-60780796 Msa0130480:intron 30.0%
AGAGATTAATTAGAAAGGAG+AGG - chr1_3:60781069-60781088 Msa0130480:intron 30.0%
! AATATTTAGAGCATCCACAA+TGG - chr1_3:60781267-60781286 Msa0130480:intron 30.0%
TTGGATACTTATTGAGCATA+AGG + chr1_3:60781544-60781563 None:intergenic 30.0%
CTCAGCACCTTAAAATTATA+AGG - chr1_3:60781895-60781914 Msa0130480:intron 30.0%
TGAATAATCGAAAGTTTGAG+AGG - chr1_3:60782059-60782078 Msa0130480:intron 30.0%
GAATAATCGAAAGTTTGAGA+GGG - chr1_3:60782060-60782079 Msa0130480:intron 30.0%
TTCTTGATACTGAAACTAGT+AGG + chr1_3:60782220-60782239 None:intergenic 30.0%
TAAACACGTGATGAAGAATA+TGG + chr1_3:60782432-60782451 None:intergenic 30.0%
ATTACAAAGGATGATCAACA+TGG + chr1_3:60782511-60782530 None:intergenic 30.0%
! ACAATCACGATTTAAAACCT+TGG + chr1_3:60782626-60782645 None:intergenic 30.0%
GTATGATGCAATTGCAATTA+CGG - chr1_3:60782689-60782708 Msa0130480:intron 30.0%
! GATTTAAAATCGAGTTTGTC+AGG - chr1_3:60782736-60782755 Msa0130480:intron 30.0%
! TAATTGGCTACATTTTTCTC+AGG + chr1_3:60782778-60782797 None:intergenic 30.0%
TGAGAAAAATGTAGCCAATT+AGG - chr1_3:60782777-60782796 Msa0130480:intron 30.0%
ATTTACAACCTTGATCTTTC+AGG + chr1_3:60782836-60782855 None:intergenic 30.0%
!!! GTTGTAAATCGTGGTTTTTT+GGG - chr1_3:60782847-60782866 Msa0130480:intron 30.0%
!!! TTGTAAATCGTGGTTTTTTG+GGG - chr1_3:60782848-60782867 Msa0130480:intron 30.0%
CTATACGAGACAATCAAATA+TGG - chr1_3:60782877-60782896 Msa0130480:intron 30.0%
GTATGATACAAGTGTAATTG+TGG - chr1_3:60782998-60783017 Msa0130480:intron 30.0%
ATACAAGTGTAATTGTGGTT+AGG - chr1_3:60783003-60783022 Msa0130480:intron 30.0%
AATCACAACACAATCATGAT+GGG + chr1_3:60783064-60783083 None:intergenic 30.0%
! ACAACTGCAATTTAAAACCA+TGG + chr1_3:60783282-60783301 None:intergenic 30.0%
AAAGTTTGCAAGCATAATCT+AGG + chr1_3:60783467-60783486 None:intergenic 30.0%
! ACTTTCTGATGTAACTTTTG+CGG + chr1_3:60783872-60783891 None:intergenic 30.0%
! GAAGAAATAGATTTAGAGCT+TGG + chr1_3:60784111-60784130 None:intergenic 30.0%
CAAGAGATGCACAAAAAATT+AGG - chr1_3:60784376-60784395 Msa0130480:CDS 30.0%
!! GAAATTCTAAAATGTACGAC+AGG - chr1_3:60784554-60784573 Msa0130480:CDS 30.0%
TGTTTACACTTACCATAGAA+GGG + chr1_3:60784664-60784683 None:intergenic 30.0%
TTGTTTACACTTACCATAGA+AGG + chr1_3:60784665-60784684 None:intergenic 30.0%
CAAAACAATGATGATCAATG+AGG + chr1_3:60784922-60784941 None:intergenic 30.0%
GAAGGATGTTGTATTTGATA+TGG + chr1_3:60785312-60785331 None:intergenic 30.0%
AATACAACATCCTTCTCTAA+CGG - chr1_3:60785317-60785336 Msa0130480:intron 30.0%
! CAAAGATTAGATGTATTGGT+GGG + chr1_3:60785355-60785374 None:intergenic 30.0%
TCAAAGATTAGATGTATTGG+TGG + chr1_3:60785356-60785375 None:intergenic 30.0%
ACCAATACATCTAATCTTTG+AGG - chr1_3:60785355-60785374 Msa0130480:intron 30.0%
ACCTCAAAGATTAGATGTAT+TGG + chr1_3:60785359-60785378 None:intergenic 30.0%
GAGAGAAGAGAACTATATTA+GGG + chr1_3:60785452-60785471 None:intergenic 30.0%
TGAGAGAAGAGAACTATATT+AGG + chr1_3:60785453-60785472 None:intergenic 30.0%
CATGCAGTTATATCGATATT+AGG + chr1_3:60785658-60785677 None:intergenic 30.0%
GAAAAAAAAAGGGTTTCTGT+TGG + chr1_3:60785694-60785713 None:intergenic 30.0%
GAAGAGGGAAAGAAAAAAAA+AGG + chr1_3:60785705-60785724 None:intergenic 30.0%
GTATTACATCTACGTCTATT+GGG + chr1_3:60785754-60785773 None:intergenic 30.0%
TGTATTACATCTACGTCTAT+TGG + chr1_3:60785755-60785774 None:intergenic 30.0%
GAATTTATTCCTGTGTGATT+AGG - chr1_3:60785782-60785801 Msa0130480:intron 30.0%
! TTACTAGCTAGTATTTCTAC+GGG + chr1_3:60785821-60785840 None:intergenic 30.0%
! CTTACTAGCTAGTATTTCTA+CGG + chr1_3:60785822-60785841 None:intergenic 30.0%
AGTAGACCAAATGAATGATA+GGG - chr1_3:60785845-60785864 Msa0130480:intron 30.0%
GGATCAAATTTAACACCTTT+AGG + chr1_3:60786169-60786188 None:intergenic 30.0%
CATATTATCTCTTGATCAGA+TGG + chr1_3:60772066-60772085 None:intergenic 30.0%
CATCTGATCAAGAGATAATA+TGG - chr1_3:60772064-60772083 Msa0130480:intron 30.0%
! TGATAAATGCATCGATGAAA+GGG + chr1_3:60786255-60786274 None:intergenic 30.0%
ACTACTCTTAAAATGGATGA+TGG - chr1_3:60772150-60772169 Msa0130480:intron 30.0%
AATATAGGTGTTTCACAAGA+TGG - chr1_3:60786409-60786428 Msa0130480:intron 30.0%
ACTAAACCTATCTTCTTGAA+CGG - chr1_3:60786547-60786566 Msa0130480:intron 30.0%
CTTTATATGTTTCCAGAGAA+TGG - chr1_3:60786601-60786620 Msa0130480:CDS 30.0%
! AAAAGGTGCAAAAACTAACT+GGG - chr1_3:60786627-60786646 Msa0130480:intron 30.0%
! ATCATCTTTTCTTCCCAATA+TGG + chr1_3:60786740-60786759 None:intergenic 30.0%
TGTTCTTGGTCTACAAAATT+GGG + chr1_3:60786853-60786872 None:intergenic 30.0%
TTGTTCTTGGTCTACAAAAT+TGG + chr1_3:60786854-60786873 None:intergenic 30.0%
!!! TTTTGCTTTGTTTTTGGAAG+AGG - chr1_3:60786979-60786998 Msa0130480:intron 30.0%
!!! TTTGCTTTGTTTTTGGAAGA+GGG - chr1_3:60786980-60786999 Msa0130480:intron 30.0%
! TCTTTTGCTTTCTTATTGGT+TGG - chr1_3:60787061-60787080 Msa0130480:CDS 30.0%
TCTTGTGTAAATGAATTAGG+AGG - chr1_3:60787144-60787163 Msa0130480:intron 30.0%
! GAATAGTTTAGCTTAAGACT+AGG - chr1_3:60787166-60787185 Msa0130480:intron 30.0%
TTCTAACACCAATTCAGTAT+AGG - chr1_3:60787212-60787231 Msa0130480:intron 30.0%
TCTAACACCAATTCAGTATA+GGG - chr1_3:60787213-60787232 Msa0130480:intron 30.0%
GTATTATTACTACTACGAAC+CGG + chr1_3:60787259-60787278 None:intergenic 30.0%
GAAACTTGGTAGAAGAAATT+AGG + chr1_3:60787326-60787345 None:intergenic 30.0%
GTAGAAACTCAATTTCATGT+AGG - chr1_3:60787765-60787784 Msa0130480:intron 30.0%
! TGATGCATTTTTGTGCTTAT+AGG - chr1_3:60788127-60788146 Msa0130480:intron 30.0%
AAATGGATGATCACCAATGT+TGG + chr1_3:60769124-60769143 None:intergenic 35.0%
AAAACCTTGATCAACATCAG+CGG + chr1_3:60769208-60769227 None:intergenic 35.0%
AAATCTAGATGTCTTGACCT+AGG - chr1_3:60769340-60769359 Msa0130480:intron 35.0%
AGTGTCTACAATTGGAACAA+AGG + chr1_3:60769639-60769658 None:intergenic 35.0%
TTGTGCTATCCTTGTAATAG+TGG - chr1_3:60769723-60769742 Msa0130480:intron 35.0%
ACAAGAGTTCCACTATTACA+AGG + chr1_3:60769735-60769754 None:intergenic 35.0%
AAGTAGGAAACTAGACATGA+AGG + chr1_3:60770125-60770144 None:intergenic 35.0%
AAAGAAAAAGTGAGGTCTCT+TGG - chr1_3:60770321-60770340 Msa0130480:CDS 35.0%
CTAGAGAGTAGTATAGACAA+CGG + chr1_3:60770451-60770470 None:intergenic 35.0%
CCTACTTAAAGAGGATTAAG+GGG + chr1_3:60770501-60770520 None:intergenic 35.0%
CCCTACTTAAAGAGGATTAA+GGG + chr1_3:60770502-60770521 None:intergenic 35.0%
CCCTTAATCCTCTTTAAGTA+GGG - chr1_3:60770499-60770518 Msa0130480:CDS 35.0%
TCCCTACTTAAAGAGGATTA+AGG + chr1_3:60770503-60770522 None:intergenic 35.0%
CCTTAAATCCCTACTTAAAG+AGG + chr1_3:60770510-60770529 None:intergenic 35.0%
CCTCTTTAAGTAGGGATTTA+AGG - chr1_3:60770507-60770526 Msa0130480:CDS 35.0%
GAAACAAGGTAGATTACAAG+GGG + chr1_3:60770561-60770580 None:intergenic 35.0%
GGAAACAAGGTAGATTACAA+GGG + chr1_3:60770562-60770581 None:intergenic 35.0%
TGGAAACAAGGTAGATTACA+AGG + chr1_3:60770563-60770582 None:intergenic 35.0%
GTTTGAGCAAATTGGAAACA+AGG + chr1_3:60770575-60770594 None:intergenic 35.0%
GTTAGAGGAACTTTCATCTT+CGG - chr1_3:60770675-60770694 Msa0130480:intron 35.0%
ATAAACTGGAGCACGAAAAA+AGG + chr1_3:60770753-60770772 None:intergenic 35.0%
! TATGATGGGGATGAATAAAC+TGG + chr1_3:60770767-60770786 None:intergenic 35.0%
GCAGAAATCTCAATAGATTC+AGG + chr1_3:60770831-60770850 None:intergenic 35.0%
TTATATGTGTGCCGTGTTAT+GGG + chr1_3:60770886-60770905 None:intergenic 35.0%
ATTATATGTGTGCCGTGTTA+TGG + chr1_3:60770887-60770906 None:intergenic 35.0%
TCTTCGATTCAGTTATGACT+GGG + chr1_3:60770987-60771006 None:intergenic 35.0%
TTCTTCGATTCAGTTATGAC+TGG + chr1_3:60770988-60771007 None:intergenic 35.0%
GGAACTGATGTGTAAGTTTA+TGG + chr1_3:60771017-60771036 None:intergenic 35.0%
!! AAGGAAAAAAGTGTTTCTGG+AGG + chr1_3:60771162-60771181 None:intergenic 35.0%
! TGTTGATAAGCCCATTTAGA+AGG + chr1_3:60771181-60771200 None:intergenic 35.0%
AGAATTTCGTCCTATGTGAT+GGG - chr1_3:60771230-60771249 Msa0130480:intron 35.0%
TACTTTCTCATTCATAGGGT+TGG + chr1_3:60771436-60771455 None:intergenic 35.0%
TGTATCGTTCAATTTCTTGG+GGG - chr1_3:60771595-60771614 Msa0130480:intron 35.0%
ATATACAAGACATCAATCGG+TGG - chr1_3:60771745-60771764 Msa0130480:intron 35.0%
TATACAAGACATCAATCGGT+GGG - chr1_3:60771746-60771765 Msa0130480:intron 35.0%
CCAATATCCATGTACATGTA+AGG + chr1_3:60771781-60771800 None:intergenic 35.0%
CCTTACATGTACATGGATAT+TGG - chr1_3:60771778-60771797 Msa0130480:intron 35.0%
!!! TGCCAATAAACTTTTAGGAC+AGG + chr1_3:60771888-60771907 None:intergenic 35.0%
GGATCAAATTTAACACCTCT+AGG + chr1_3:60772045-60772064 None:intergenic 35.0%
AATTCATCGATGAATGGATG+GGG + chr1_3:60772126-60772145 None:intergenic 35.0%
! TATAGGCTTTGATTGCTCTA+TGG + chr1_3:60772326-60772345 None:intergenic 35.0%
GCAATCAAAGCCTATAATAC+TGG - chr1_3:60772330-60772349 Msa0130480:intron 35.0%
!! CACATATTTTTCGACGCTTT+CGG + chr1_3:60772359-60772378 None:intergenic 35.0%
ACTAAACCTATCCTCTTGAA+CGG - chr1_3:60772420-60772439 Msa0130480:intron 35.0%
GAAAAGCTGAGAAAACTAAC+TGG - chr1_3:60772499-60772518 Msa0130480:intron 35.0%
GTTATGCATCAATACCATCT+TGG - chr1_3:60772522-60772541 Msa0130480:intron 35.0%
!! GTCATCTTTTTCACCCAATT+TGG + chr1_3:60772613-60772632 None:intergenic 35.0%
! TTTTATAACAGTTGCTTCCG+AGG + chr1_3:60772652-60772671 None:intergenic 35.0%
GGAAGCAACTGTTATAAAAG+TGG - chr1_3:60772653-60772672 Msa0130480:intron 35.0%
! AGTGGAAATGATTTTACCTG+AGG + chr1_3:60772771-60772790 None:intergenic 35.0%
CGCAAAATCGCATATAATCA+AGG + chr1_3:60772860-60772879 None:intergenic 35.0%
! TGATTATATGCGATTTTGCG+CGG - chr1_3:60772860-60772879 Msa0130480:intron 35.0%
GTTAAACTCATAATGCTGGT+TGG - chr1_3:60772963-60772982 Msa0130480:intron 35.0%
TACAGATAACCAAGAGTGAT+TGG + chr1_3:60773186-60773205 None:intergenic 35.0%
!!! TTGATAGTTTTGGTTCGTGA+TGG - chr1_3:60773306-60773325 Msa0130480:intron 35.0%
AGATTCTACCAGATCTTTCT+CGG - chr1_3:60773394-60773413 Msa0130480:CDS 35.0%
! ATAGTCGACGAGTCAATTTT+TGG + chr1_3:60773462-60773481 None:intergenic 35.0%
ATTGAATTCACAGCAACTTG+CGG - chr1_3:60773533-60773552 Msa0130480:intron 35.0%
TGAGCATATACAGAAAGACT+AGG + chr1_3:60773639-60773658 None:intergenic 35.0%
! CAGTTGACTTAATCGAATGT+CGG + chr1_3:60773847-60773866 None:intergenic 35.0%
TGGAAGGTCATTGAAAAAGT+AGG + chr1_3:60773875-60773894 None:intergenic 35.0%
TTAATAGGAATTCAGCTCAC+AGG - chr1_3:60773967-60773986 Msa0130480:intron 35.0%
!! AGAAAGCATTGATTACAGCT+TGG + chr1_3:60774131-60774150 None:intergenic 35.0%
TCATCTAGGCACTCAAATAT+TGG - chr1_3:60774183-60774202 Msa0130480:intron 35.0%
!! CTTGACTTGTCCACATATAA+AGG - chr1_3:60774214-60774233 Msa0130480:intron 35.0%
CAACATGTGTCCTTTATATG+TGG + chr1_3:60774227-60774246 None:intergenic 35.0%
GTAGACAATGCATTTGTCTT+TGG + chr1_3:60774315-60774334 None:intergenic 35.0%
! CATGTGATATATGGTGTTGA+CGG - chr1_3:60774353-60774372 Msa0130480:intron 35.0%
GAAAATGAGAGCAAGTTCTT+GGG + chr1_3:60774462-60774481 None:intergenic 35.0%
! CATGAGTGTTACTATCTGTT+GGG - chr1_3:60774490-60774509 Msa0130480:intron 35.0%
TGATCTTAGTCGATAAAAGG+AGG + chr1_3:60774663-60774682 None:intergenic 35.0%
TTGTAGGGTAAAGAGTTGAA+GGG + chr1_3:60774691-60774710 None:intergenic 35.0%
TTTGTAGGGTAAAGAGTTGA+AGG + chr1_3:60774692-60774711 None:intergenic 35.0%
CAACTGTGAGTAGAAGATAT+AGG - chr1_3:60774805-60774824 Msa0130480:intron 35.0%
!! GTTCAAAAGTATGTGCCTTT+TGG - chr1_3:60775119-60775138 Msa0130480:intron 35.0%
!! TCAAAAGTATGTGCCTTTTG+GGG - chr1_3:60775121-60775140 Msa0130480:intron 35.0%
!!! CAAACTCTTTTTTCCCATGA+TGG - chr1_3:60775173-60775192 Msa0130480:intron 35.0%
GATGGTTGAGATCTTTAACT+TGG - chr1_3:60775239-60775258 Msa0130480:intron 35.0%
! GTAATTGTTGCAACTTTTGG+TGG - chr1_3:60775261-60775280 Msa0130480:intron 35.0%
!! TTTTAATCATTTGGTGGGGT+TGG + chr1_3:60775297-60775316 None:intergenic 35.0%
! GTTTGGATTTGAGTGGATTT+AGG + chr1_3:60775460-60775479 None:intergenic 35.0%
GATAAAGGTTTGGATTTGAG+TGG + chr1_3:60775467-60775486 None:intergenic 35.0%
GAGGTACATTTGTAAAAGTG+AGG - chr1_3:60775761-60775780 Msa0130480:intron 35.0%
TGGCCAAACAAAAAACAATC+TGG + chr1_3:60775817-60775836 None:intergenic 35.0%
! CATCTGAGATGTACTTATCA+AGG + chr1_3:60775955-60775974 None:intergenic 35.0%
AGATTCTCATCGAAGAAATG+CGG - chr1_3:60776029-60776048 Msa0130480:intron 35.0%
! CTCAATGAACTTGCTTTGAT+CGG - chr1_3:60776259-60776278 Msa0130480:intron 35.0%
! AAAAGTACAGTCCATCTTGA+AGG + chr1_3:60776497-60776516 None:intergenic 35.0%
AGTGTATAGATGATGATCCT+TGG + chr1_3:60776557-60776576 None:intergenic 35.0%
! ATGGTTAGCCATAACCTAAT+TGG + chr1_3:60776906-60776925 None:intergenic 35.0%
TTAGACAATACTCGTAGAGT+TGG + chr1_3:60777059-60777078 None:intergenic 35.0%
! TCTACGAGTATTGTCTAACA+AGG - chr1_3:60777061-60777080 Msa0130480:intron 35.0%
CAACATTAGAAAGAGAGTTG+GGG + chr1_3:60777608-60777627 None:intergenic 35.0%
GACAACATTAGAAAGAGAGT+TGG + chr1_3:60777610-60777629 None:intergenic 35.0%
CTCTTTCTAATGTTGTCATC+TGG - chr1_3:60777613-60777632 Msa0130480:intron 35.0%
AGGTTAATTAAATGGGAGGT+TGG + chr1_3:60777696-60777715 None:intergenic 35.0%
TCGAAGGTTAATTAAATGGG+AGG + chr1_3:60777700-60777719 None:intergenic 35.0%
!! GCTATTTTGTACGAATGGTT+TGG - chr1_3:60777751-60777770 Msa0130480:intron 35.0%
GTCAAGATAAAATGAAAGGG+CGG - chr1_3:60777815-60777834 Msa0130480:intron 35.0%
ACTAGTAATATTGCATAGCC+AGG + chr1_3:60777870-60777889 None:intergenic 35.0%
!!! CACGGGTTTTATTAGGATTT+AGG - chr1_3:60777907-60777926 Msa0130480:intron 35.0%
AAACACAAGAAAGCCATATG+AGG + chr1_3:60778276-60778295 None:intergenic 35.0%
TCATATGGCTTTCTTGTGTT+TGG - chr1_3:60778275-60778294 Msa0130480:intron 35.0%
CATATGGCTTTCTTGTGTTT+GGG - chr1_3:60778276-60778295 Msa0130480:intron 35.0%
GTTGAACTCTTTACCTTGTT+TGG - chr1_3:60778441-60778460 Msa0130480:intron 35.0%
TACAAATAGATGCCCAAACA+AGG + chr1_3:60778457-60778476 None:intergenic 35.0%
TGGGCATCTATTTGTAATAG+GGG - chr1_3:60778461-60778480 Msa0130480:intron 35.0%
TCTATTTGTAATAGGGGTCT+CGG - chr1_3:60778467-60778486 Msa0130480:intron 35.0%
GGAATAAATTACCAAAAGCC+AGG + chr1_3:60778585-60778604 None:intergenic 35.0%
! CGAGAAAATAAGGTTGGTTA+TGG + chr1_3:60778831-60778850 None:intergenic 35.0%
!! AGGTCTAAGTTTTGCTATAG+TGG + chr1_3:60778871-60778890 None:intergenic 35.0%
! GTGTTAACCATCTAGTTTCT+AGG - chr1_3:60779246-60779265 Msa0130480:intron 35.0%
! GTTAACCATCTAGTTTCTAG+GGG - chr1_3:60779248-60779267 Msa0130480:intron 35.0%
ACTCAATTTCGATTTCAGGA+TGG + chr1_3:60779333-60779352 None:intergenic 35.0%
GAGTACTCAATTTCGATTTC+AGG + chr1_3:60779337-60779356 None:intergenic 35.0%
GAAATCGAAATTGAGTACTC+CGG - chr1_3:60779337-60779356 Msa0130480:intron 35.0%
CTAACATAAATGGTCACATG+CGG + chr1_3:60780087-60780106 None:intergenic 35.0%
TTCCAACTCAATACACATGA+AGG + chr1_3:60780319-60780338 None:intergenic 35.0%
TTGAGCAATGCAAATGAAAG+AGG - chr1_3:60780422-60780441 Msa0130480:CDS 35.0%
! ACCAAACCATAGGATGATTT+TGG - chr1_3:60780464-60780483 Msa0130480:CDS 35.0%
ACCAAAATCATCCTATGGTT+TGG + chr1_3:60780468-60780487 None:intergenic 35.0%
AGTATTTGATGAACCTGAAG+AGG - chr1_3:60780658-60780677 Msa0130480:CDS 35.0%
AGCGGTGAAAAAAATTCTCT+AGG - chr1_3:60780740-60780759 Msa0130480:intron 35.0%
GGTGAAAAAAATTCTCTAGG+TGG - chr1_3:60780743-60780762 Msa0130480:intron 35.0%
TCTCTCATATATATGCCACA+TGG + chr1_3:60781054-60781073 None:intergenic 35.0%
TAATTAGAAAGGAGAGGCTT+TGG - chr1_3:60781075-60781094 Msa0130480:intron 35.0%
AAATATGAGTACCTCCATTG+TGG + chr1_3:60781284-60781303 None:intergenic 35.0%
TGTACATGTGTGACTCATTT+AGG + chr1_3:60781312-60781331 None:intergenic 35.0%
AGAACTGTTGTTAGAGATGT+TGG + chr1_3:60781393-60781412 None:intergenic 35.0%
!!! TAAGCACCTCAGTTTTAAGT+GGG + chr1_3:60781482-60781501 None:intergenic 35.0%
!!! TTAAGCACCTCAGTTTTAAG+TGG + chr1_3:60781483-60781502 None:intergenic 35.0%
AAGGGGTGAATTTAATATGG+TGG - chr1_3:60781855-60781874 Msa0130480:intron 35.0%
TAGTGCAATTCAAATGAGTG+TGG + chr1_3:60782143-60782162 None:intergenic 35.0%
! AATGGGATTTGCTTCTTTCA+TGG - chr1_3:60782315-60782334 Msa0130480:intron 35.0%
CTTCATCACGTGTTTAATAG+TGG - chr1_3:60782436-60782455 Msa0130480:intron 35.0%
TCCATCGAATTCTAAACTAG+GGG + chr1_3:60782559-60782578 None:intergenic 35.0%
CTCCATCGAATTCTAAACTA+GGG + chr1_3:60782560-60782579 None:intergenic 35.0%
TCTCCATCGAATTCTAAACT+AGG + chr1_3:60782561-60782580 None:intergenic 35.0%
! AGTTTAGAATTCGATGGAGA+TGG - chr1_3:60782561-60782580 Msa0130480:intron 35.0%
TTAGTTTCTCATGTTGACCA+AGG - chr1_3:60782606-60782625 Msa0130480:intron 35.0%
! CTACATTTTTCTCAGGATCA+AGG + chr1_3:60782771-60782790 None:intergenic 35.0%
AAGATCAAGGTTGTAAATCG+TGG - chr1_3:60782838-60782857 Msa0130480:intron 35.0%
!!! GGTTGTAAATCGTGGTTTTT+TGG - chr1_3:60782846-60782865 Msa0130480:intron 35.0%
ATCCAATCCAATAGGCATTT+AGG - chr1_3:60782912-60782931 Msa0130480:intron 35.0%
TCCAATCCAATAGGCATTTA+GGG - chr1_3:60782913-60782932 Msa0130480:intron 35.0%
!! CTTTAATTTTCTCACGGATC+AGG + chr1_3:60782970-60782989 None:intergenic 35.0%
! ACAATTTAAAGCCTCGATCT+TGG + chr1_3:60783038-60783057 None:intergenic 35.0%
GAATCACAACACAATCATGA+TGG + chr1_3:60783065-60783084 None:intergenic 35.0%
TGTGTTGTGATTCCTCATAT+TGG - chr1_3:60783072-60783091 Msa0130480:intron 35.0%
GTGTTGTGATTCCTCATATT+GGG - chr1_3:60783073-60783092 Msa0130480:intron 35.0%
ATTGCAATTTGCCCAATATG+AGG + chr1_3:60783087-60783106 None:intergenic 35.0%
TTGCAATTGTAGTCAAACAG+CGG + chr1_3:60783124-60783143 None:intergenic 35.0%
!! ATGGTGAATTTCTAAGACCA+TGG - chr1_3:60783262-60783281 Msa0130480:CDS 35.0%
TCGAAGTTGTGATGTAGTTA+TGG - chr1_3:60783415-60783434 Msa0130480:CDS 35.0%
!!! GCAAACTTTTTCTGAAACCT+AGG - chr1_3:60783478-60783497 Msa0130480:CDS 35.0%
TCAACCACATTTAAGTCCAA+CGG + chr1_3:60783542-60783561 None:intergenic 35.0%
ATTTCGCCTTCATTCTGATT+CGG - chr1_3:60783563-60783582 Msa0130480:CDS 35.0%
CCACAACATGTTGACAATTA+GGG + chr1_3:60783912-60783931 None:intergenic 35.0%
TCCACAACATGTTGACAATT+AGG + chr1_3:60783913-60783932 None:intergenic 35.0%
ATATTGCATTTCTGTGCGTA+AGG - chr1_3:60784022-60784041 Msa0130480:intron 35.0%
TGTGCGTAAGGTTTATTTCA+TGG - chr1_3:60784034-60784053 Msa0130480:intron 35.0%
TACTCCTAAGACATTGATCA+CGG - chr1_3:60784220-60784239 Msa0130480:intron 35.0%
AAACTGTCGTCAAATTTCGT+CGG - chr1_3:60784683-60784702 Msa0130480:CDS 35.0%
ATATTAAGAGCCATGCTATG+CGG + chr1_3:60784721-60784740 None:intergenic 35.0%
AATCCTTGTAGATGTGTCTA+AGG - chr1_3:60784952-60784971 Msa0130480:CDS 35.0%
ATACAACATCCTTCTCTAAC+GGG - chr1_3:60785318-60785337 Msa0130480:intron 35.0%
ATTGAATTTCCCGTTAGAGA+AGG + chr1_3:60785330-60785349 None:intergenic 35.0%
TCTTTCCCTCTTCTTCTAAA+CGG - chr1_3:60785712-60785731 Msa0130480:intron 35.0%
TAAGACCGTTTAGAAGAAGA+GGG + chr1_3:60785720-60785739 None:intergenic 35.0%
ATAAGACCGTTTAGAAGAAG+AGG + chr1_3:60785721-60785740 None:intergenic 35.0%
CAGTAGACCAAATGAATGAT+AGG - chr1_3:60785844-60785863 Msa0130480:intron 35.0%
CTATTGCCCTATCATTCATT+TGG + chr1_3:60785854-60785873 None:intergenic 35.0%
CAAATGAATGATAGGGCAAT+AGG - chr1_3:60785852-60785871 Msa0130480:intron 35.0%
! GTGATAAATGCATCGATGAA+AGG + chr1_3:60786256-60786275 None:intergenic 35.0%
TAAAGCTTAGATTATCCACC+TGG + chr1_3:60786328-60786347 None:intergenic 35.0%
TATAAGCTTTCACTGCTCTA+TGG + chr1_3:60786453-60786472 None:intergenic 35.0%
GAAAGGCTGCAAAAAGATTA+TGG - chr1_3:60786576-60786595 Msa0130480:CDS 35.0%
TATATGTTTCCAGAGAATGG+AGG - chr1_3:60786604-60786623 Msa0130480:CDS 35.0%
! GAAAAGGTGCAAAAACTAAC+TGG - chr1_3:60786626-60786645 Msa0130480:intron 35.0%
GTTATGCATCAGTATCATCT+TGG - chr1_3:60786649-60786668 Msa0130480:intron 35.0%
ACAAAATTGGGACTGATAAG+AGG + chr1_3:60786841-60786860 None:intergenic 35.0%
TATGGTGAGTTTCTTGTTCT+TGG + chr1_3:60786867-60786886 None:intergenic 35.0%
AAAGTTCTACCTGAGGAATA+TGG + chr1_3:60786885-60786904 None:intergenic 35.0%
GAAGTTAAAAGTTCTACCTG+AGG + chr1_3:60786892-60786911 None:intergenic 35.0%
TATTAGTGGCAGATGATAAC+TGG + chr1_3:60786944-60786963 None:intergenic 35.0%
CTAACACCAATTCAGTATAG+GGG - chr1_3:60787214-60787233 Msa0130480:intron 35.0%
TGTATACCCCTATACTGAAT+TGG + chr1_3:60787223-60787242 None:intergenic 35.0%
AGAAGAACATGAACAAAGAG+TGG + chr1_3:60787356-60787375 None:intergenic 35.0%
AAATGAATCACCATGAGTTG+AGG + chr1_3:60787387-60787406 None:intergenic 35.0%
!!! ACCTTTTTTCAACCAATCAG+CGG - chr1_3:60787428-60787447 Msa0130480:intron 35.0%
TCTTCTAACTGAGGAAGATT+TGG + chr1_3:60787687-60787706 None:intergenic 35.0%
ATCTTCCTCAGTTAGAAGAA+TGG - chr1_3:60787688-60787707 Msa0130480:intron 35.0%
AGAATGGCTACTTAATAGTC+AGG - chr1_3:60787704-60787723 Msa0130480:intron 35.0%
TGAAATTGAGTTTCTACCGT+CGG + chr1_3:60787762-60787781 None:intergenic 35.0%
AGTGAATCCAATAGATTCAG+TGG + chr1_3:60787810-60787829 None:intergenic 35.0%
GAATCTATTGGATTCACTTC+CGG - chr1_3:60787812-60787831 Msa0130480:intron 35.0%
TCGAACCAAGAAAATGTTTC+CGG + chr1_3:60787834-60787853 None:intergenic 35.0%
TGATCATATGTCGAAAGACT+AGG + chr1_3:60787918-60787937 None:intergenic 35.0%
CTTTCGACATATGATCATCT+AGG - chr1_3:60787921-60787940 Msa0130480:intron 35.0%
ATGTCTTTCTTTAACTGCTC+TGG + chr1_3:60787948-60787967 None:intergenic 35.0%
AGAGCAGTTAAAGAAAGACA+TGG - chr1_3:60787947-60787966 Msa0130480:intron 35.0%
! CAGTTGACTTAATCGAATGT+CGG + chr1_3:60773847-60773866 None:intergenic 35.0%
!! AATGGGTTTTGCCTCTTTCA+TGG - chr1_3:60768955-60768974 Msa0130480:intron 40.0%
! CGAGGATTTTTCCATGAAAG+AGG + chr1_3:60768969-60768988 None:intergenic 40.0%
! CTGCAATTTGCTCGGTATTA+AGG + chr1_3:60769272-60769291 None:intergenic 40.0%
! CTAATCGACTGCAATTTGCT+CGG + chr1_3:60769280-60769299 None:intergenic 40.0%
CGATATAGTTATCCAGATCG+CGG - chr1_3:60769372-60769391 Msa0130480:intron 40.0%
AAAAAATTGCAACCGCGATC+TGG + chr1_3:60769387-60769406 None:intergenic 40.0%
TATCTTATTCGTGACGTCCT+TGG - chr1_3:60769611-60769630 Msa0130480:intron 40.0%
CAATTGGAACAAAGGAACCA+AGG + chr1_3:60769631-60769650 None:intergenic 40.0%
GTGTGCTATCCTTGTAATAG+TGG - chr1_3:60769756-60769775 Msa0130480:intron 40.0%
TAGGAAACTAGACATGAAGG+AGG + chr1_3:60770122-60770141 None:intergenic 40.0%
AATGTCCTGATCAGAATCAC+AGG + chr1_3:60770374-60770393 None:intergenic 40.0%
!! CGGATTCTTGATAGCTGTTT+TGG - chr1_3:60770423-60770442 Msa0130480:CDS 40.0%
CCCCTTAATCCTCTTTAAGT+AGG - chr1_3:60770498-60770517 Msa0130480:CDS 40.0%
! TGCATGCTGTTTGAGCAAAT+TGG + chr1_3:60770583-60770602 None:intergenic 40.0%
ACATGTGTAGATGTGGTTGT+GGG + chr1_3:60770657-60770676 None:intergenic 40.0%
AACATGTGTAGATGTGGTTG+TGG + chr1_3:60770658-60770677 None:intergenic 40.0%
ACCACATCTACACATGTTAG+AGG - chr1_3:60770660-60770679 Msa0130480:intron 40.0%
TCCTCTAACATGTGTAGATG+TGG + chr1_3:60770664-60770683 None:intergenic 40.0%
ACGAAAAAAGGCAGTACAGA+GGG + chr1_3:60770741-60770760 None:intergenic 40.0%
CTTCATCCATTCCCATAACA+CGG - chr1_3:60770872-60770891 Msa0130480:intron 40.0%
GAAGTGGACGATTTATAGCT+TGG + chr1_3:60770910-60770929 None:intergenic 40.0%
CAAGAAGGGACTCAATTAGA+TGG + chr1_3:60771055-60771074 None:intergenic 40.0%
CAACAGTTTGGACCAAATGT+TGG - chr1_3:60771086-60771105 Msa0130480:intron 40.0%
GAGAATTTCGTCCTATGTGA+TGG - chr1_3:60771229-60771248 Msa0130480:intron 40.0%
GGGAAGACCTGTAGAAATAT+CGG - chr1_3:60771250-60771269 Msa0130480:intron 40.0%
GACCTGTAGAAATATCGGTA+AGG - chr1_3:60771255-60771274 Msa0130480:intron 40.0%
! CTCCTTACCGATATTTCTAC+AGG + chr1_3:60771260-60771279 None:intergenic 40.0%
GAAATATCGGTAAGGAGAGT+AGG - chr1_3:60771263-60771282 Msa0130480:intron 40.0%
AAAAGGAACGGAAATGCAGT+AGG - chr1_3:60771519-60771538 Msa0130480:intron 40.0%
GCATTCACCTTACATGTACA+TGG - chr1_3:60771771-60771790 Msa0130480:intron 40.0%
TATTGGCGATCTCAAATGCT+TGG - chr1_3:60771795-60771814 Msa0130480:intron 40.0%
GTTGTTAGGTAACACAAGAG+TGG - chr1_3:60772010-60772029 Msa0130480:intron 40.0%
TTAACACCTCTAGGTAATCC+AGG + chr1_3:60772036-60772055 None:intergenic 40.0%
!! TTGCTTGCAAAAGTTGGTGA+AGG - chr1_3:60772090-60772109 Msa0130480:intron 40.0%
CTTTCGGCTTCCAGTATTAT+AGG + chr1_3:60772343-60772362 None:intergenic 40.0%
!! CGAAAGCGTCGAAAAATATG+TGG - chr1_3:60772357-60772376 Msa0130480:intron 40.0%
CTAAACCTATCCTCTTGAAC+GGG - chr1_3:60772421-60772440 Msa0130480:intron 40.0%
CTTTATATGACTCCAGAGAG+TGG - chr1_3:60772474-60772493 Msa0130480:intron 40.0%
ATACCATCTTGGAACAGAAG+AGG - chr1_3:60772533-60772552 Msa0130480:intron 40.0%
TGGAACAGAAGAGGATGAAA+AGG - chr1_3:60772542-60772561 Msa0130480:intron 40.0%
ACAGAAGAGGATGAAAAGGA+TGG - chr1_3:60772546-60772565 Msa0130480:intron 40.0%
CCAAAATGTTCCTGAAACCT+CGG - chr1_3:60772632-60772651 Msa0130480:intron 40.0%
AGAATCTCATCATAGTCCTC+AGG - chr1_3:60772752-60772771 Msa0130480:intron 40.0%
ACACCCTCTTCCAAAAACAA+AGG + chr1_3:60772817-60772836 None:intergenic 40.0%
CTTAACCTTCCAATCACTCT+TGG - chr1_3:60773174-60773193 Msa0130480:CDS 40.0%
GATAACCAAGAGTGATTGGA+AGG + chr1_3:60773182-60773201 None:intergenic 40.0%
TAATCACTCCCATTCAAAGC+TGG + chr1_3:60773265-60773284 None:intergenic 40.0%
CATTCTAACCGAGAAAGATC+TGG + chr1_3:60773405-60773424 None:intergenic 40.0%
CAGATCTTTCTCGGTTAGAA+TGG - chr1_3:60773403-60773422 Msa0130480:intron 40.0%
AGAATGGCTACTTGAAAGTC+AGG - chr1_3:60773419-60773438 Msa0130480:intron 40.0%
CTGAAAGAAATCTGCGAACA+AGG + chr1_3:60773568-60773587 None:intergenic 40.0%
! CAGTGTCAAGGTTGAGATTT+TGG + chr1_3:60773797-60773816 None:intergenic 40.0%
TGACTTAATCGAATGTCGGA+AGG + chr1_3:60773843-60773862 None:intergenic 40.0%
CGACATTCGATTAAGTCAAC+TGG - chr1_3:60773845-60773864 Msa0130480:intron 40.0%
!! AGCATTGATTACAGCTTGGT+TGG + chr1_3:60774127-60774146 None:intergenic 40.0%
GGCACTCAAATATTGGAATG+TGG - chr1_3:60774190-60774209 Msa0130480:intron 40.0%
AATTTCATGATCTGCAAGGC+TGG + chr1_3:60774402-60774421 None:intergenic 40.0%
GGAAAATGAGAGCAAGTTCT+TGG + chr1_3:60774463-60774482 None:intergenic 40.0%
!! AGAACTTGCTCTCATTTTCC+AGG - chr1_3:60774463-60774482 Msa0130480:intron 40.0%
!! GAACTTGCTCTCATTTTCCA+GGG - chr1_3:60774464-60774483 Msa0130480:intron 40.0%
! GCATGAGTGTTACTATCTGT+TGG - chr1_3:60774489-60774508 Msa0130480:intron 40.0%
TTACTATCTGTTGGGAGTGA+AGG - chr1_3:60774498-60774517 Msa0130480:intron 40.0%
TACTATCTGTTGGGAGTGAA+GGG - chr1_3:60774499-60774518 Msa0130480:intron 40.0%
TGTAGGGTAAAGAGTTGAAG+GGG + chr1_3:60774690-60774709 None:intergenic 40.0%
!!! TGGAGTTTTATTCAGGGACA+TGG + chr1_3:60774968-60774987 None:intergenic 40.0%
!! TTTTTAGGGGTTGAGCAACT+TGG - chr1_3:60775008-60775027 Msa0130480:intron 40.0%
!! TTTTAGGGGTTGAGCAACTT+GGG - chr1_3:60775009-60775028 Msa0130480:intron 40.0%
CATTCTGTGTTGCCACAATA+AGG + chr1_3:60775087-60775106 None:intergenic 40.0%
TTTCTGGGTAGGTAAAGAGA+AGG + chr1_3:60775346-60775365 None:intergenic 40.0%
! ATAAGCGTGAATGGGTTTCT+GGG + chr1_3:60775361-60775380 None:intergenic 40.0%
GGTTGTAGATAAGCGTGAAT+GGG + chr1_3:60775369-60775388 None:intergenic 40.0%
AGGTTGTAGATAAGCGTGAA+TGG + chr1_3:60775370-60775389 None:intergenic 40.0%
AAGCAATCTTCATGGTGCAT+GGG + chr1_3:60775415-60775434 None:intergenic 40.0%
AAAGCAATCTTCATGGTGCA+TGG + chr1_3:60775416-60775435 None:intergenic 40.0%
! ATACTTGGATTAGAAAGGGG+AGG - chr1_3:60775742-60775761 Msa0130480:intron 40.0%
ACTGTTGAGACACATTCTGT+TGG - chr1_3:60775988-60776007 Msa0130480:intron 40.0%
CTTCGATGAGAATCTGTCAA+GGG + chr1_3:60776024-60776043 None:intergenic 40.0%
TCTTCGATGAGAATCTGTCA+AGG + chr1_3:60776025-60776044 None:intergenic 40.0%
CTCCTTCAAGATGATCAGAA+TGG - chr1_3:60776290-60776309 Msa0130480:intron 40.0%
TGCCATTCTGATCATCTTGA+AGG + chr1_3:60776295-60776314 None:intergenic 40.0%
CAAGATGATCAGAATGGCAA+CGG - chr1_3:60776296-60776315 Msa0130480:intron 40.0%
AAAGGAGAAAGACATAGCAG+AGG - chr1_3:60776319-60776338 Msa0130480:intron 40.0%
!!! TGCACTTGAGCTTTTTTGTC+GGG + chr1_3:60776355-60776374 None:intergenic 40.0%
!!! GTGCACTTGAGCTTTTTTGT+CGG + chr1_3:60776356-60776375 None:intergenic 40.0%
TTACAGAGTCTCCTTCAAGA+TGG - chr1_3:60776483-60776502 Msa0130480:intron 40.0%
TGGTTCGAAAGAAAAGAACC+TGG + chr1_3:60776537-60776556 None:intergenic 40.0%
! GGTTCTTTTCTTTCGAACCA+AGG - chr1_3:60776537-60776556 Msa0130480:intron 40.0%
AGTTGTCCTTGGAGCAAAAA+AGG - chr1_3:60776600-60776619 Msa0130480:intron 40.0%
!!! GTGTTACCTTTTTTGCTCCA+AGG + chr1_3:60776609-60776628 None:intergenic 40.0%
ACTTTCAACCGTGACATTGT+TGG - chr1_3:60776627-60776646 Msa0130480:intron 40.0%
ACGTCGTATGAAAAGTGATC+CGG - chr1_3:60776782-60776801 Msa0130480:intron 40.0%
AGGTTATGGCTAACCATACA+TGG - chr1_3:60776909-60776928 Msa0130480:intron 40.0%
GGTTATGGCTAACCATACAT+GGG - chr1_3:60776910-60776929 Msa0130480:intron 40.0%
GTTATGGCTAACCATACATG+GGG - chr1_3:60776911-60776930 Msa0130480:intron 40.0%
! ACAATACTCGTAGAGTTGGT+TGG + chr1_3:60777055-60777074 None:intergenic 40.0%
GGGGTAGACATGTAGATAAT+AGG + chr1_3:60777589-60777608 None:intergenic 40.0%
AGGATGTTGTGTTAGGTGTT+TGG + chr1_3:60777661-60777680 None:intergenic 40.0%
GAGGTTGGAACGTAGATAAA+AGG + chr1_3:60777681-60777700 None:intergenic 40.0%
AGCGGTTGGAAATAAAACAC+TGG - chr1_3:60777844-60777863 Msa0130480:intron 40.0%
TTGGAAATAAAACACTGGCC+TGG - chr1_3:60777849-60777868 Msa0130480:intron 40.0%
!! GATCAAGAGTGGACTTCTTT+TGG + chr1_3:60778336-60778355 None:intergenic 40.0%
GTCGAGTAATTGATCAAGAG+TGG + chr1_3:60778347-60778366 None:intergenic 40.0%
!!! ACTTCTTGTGCTGATTTTCC+TGG - chr1_3:60778564-60778583 Msa0130480:intron 40.0%
!! AGACCATTTTAACACGACAG+CGG - chr1_3:60778677-60778696 Msa0130480:intron 40.0%
GAACTATTGTCGTGTTGAGA+AGG + chr1_3:60778891-60778910 None:intergenic 40.0%
ATCTTCCCCTAGAAACTAGA+TGG + chr1_3:60779256-60779275 None:intergenic 40.0%
TGGGAGAACCCTAGATTATT+AGG + chr1_3:60779281-60779300 None:intergenic 40.0%
ATCACTTGAGTCCAATCACT+TGG - chr1_3:60779389-60779408 Msa0130480:intron 40.0%
GACCTTCATGTGTATTGAGT+TGG - chr1_3:60780314-60780333 Msa0130480:intron 40.0%
TGGTGGAGAACAACATATAG+TGG - chr1_3:60780708-60780727 Msa0130480:intron 40.0%
AGAAAATGATTGGGGGTAAG+TGG - chr1_3:60780784-60780803 Msa0130480:intron 40.0%
GGGTAAGTGGTGGTTATAAA+GGG - chr1_3:60780797-60780816 Msa0130480:intron 40.0%
TGGTGGTTATAAAGGGTGAA+AGG - chr1_3:60780804-60780823 Msa0130480:intron 40.0%
GGTGGTTATAAAGGGTGAAA+GGG - chr1_3:60780805-60780824 Msa0130480:intron 40.0%
AAGAAAAAGAGAGAGCCATG+TGG - chr1_3:60781036-60781055 Msa0130480:intron 40.0%
! ATTTAGAGCATCCACAATGG+AGG - chr1_3:60781270-60781289 Msa0130480:intron 40.0%
!!! AAGCACCTCAGTTTTAAGTG+GGG + chr1_3:60781481-60781500 None:intergenic 40.0%
GGGAAGGGGTGAATTTAATA+TGG - chr1_3:60781852-60781871 Msa0130480:intron 40.0%
! CATTTGAGGTGCTAGCTTAA+CGG + chr1_3:60781932-60781951 None:intergenic 40.0%
CTCTCTCTTTGTCTCACTTA+TGG - chr1_3:60782172-60782191 Msa0130480:intron 40.0%
!! ATTTGAGCTTGCTATGCTCA+TGG - chr1_3:60782358-60782377 Msa0130480:intron 40.0%
! TCCCCTAGTTTAGAATTCGA+TGG - chr1_3:60782555-60782574 Msa0130480:intron 40.0%
AATTCGATGGAGATGGTTGT+AGG - chr1_3:60782568-60782587 Msa0130480:intron 40.0%
AAATCTGCGTCGTACCTAAT+TGG + chr1_3:60782794-60782813 None:intergenic 40.0%
GTACGACGCAGATTTAATTG+TGG - chr1_3:60782799-60782818 Msa0130480:intron 40.0%
CAATGTGACCTGAAAGATCA+AGG - chr1_3:60782825-60782844 Msa0130480:intron 40.0%
!!! AAATCGTGGTTTTTTGGGGT+TGG - chr1_3:60782852-60782871 Msa0130480:intron 40.0%
! ATTGGATTGGATGACAGACA+GGG + chr1_3:60782904-60782923 None:intergenic 40.0%
! TATTGGATTGGATGACAGAC+AGG + chr1_3:60782905-60782924 None:intergenic 40.0%
TGTCTGTCATCCAATCCAAT+AGG - chr1_3:60782904-60782923 Msa0130480:intron 40.0%
TCCCTAAATGCCTATTGGAT+TGG + chr1_3:60782917-60782936 None:intergenic 40.0%
ACACAACTGTGACACAATCA+GGG + chr1_3:60782941-60782960 None:intergenic 40.0%
AACACAACTGTGACACAATC+AGG + chr1_3:60782942-60782961 None:intergenic 40.0%
! ATTTAAAGCCTCGATCTTGG+TGG + chr1_3:60783035-60783054 None:intergenic 40.0%
TGGGCAAATTGCAATCCATT+AGG - chr1_3:60783092-60783111 Msa0130480:intron 40.0%
CTACAATTGCAATCGTGATG+TGG - chr1_3:60783132-60783151 Msa0130480:intron 40.0%
TACAAACCTCTGCAAAATGG+AGG + chr1_3:60783313-60783332 None:intergenic 40.0%
GGTTACAAACCTCTGCAAAA+TGG + chr1_3:60783316-60783335 None:intergenic 40.0%
GTAACCACATGTAGCTTATG+CGG - chr1_3:60783330-60783349 Msa0130480:CDS 40.0%
TAACCACATGTAGCTTATGC+GGG - chr1_3:60783331-60783350 Msa0130480:CDS 40.0%
CTACATCACAACTTCGACTT+GGG + chr1_3:60783412-60783431 None:intergenic 40.0%
ACTACATCACAACTTCGACT+TGG + chr1_3:60783413-60783432 None:intergenic 40.0%
CTGAAACCTAGGTATGTTGT+CGG - chr1_3:60783489-60783508 Msa0130480:CDS 40.0%
TGAAACCTAGGTATGTTGTC+GGG - chr1_3:60783490-60783509 Msa0130480:CDS 40.0%
GTTTGAATCGTGGATGATGT+GGG + chr1_3:60783519-60783538 None:intergenic 40.0%
AAACCCGTTGGACTTAAATG+TGG - chr1_3:60783535-60783554 Msa0130480:CDS 40.0%
CAACCACATTTAAGTCCAAC+GGG + chr1_3:60783541-60783560 None:intergenic 40.0%
AACCAAATCCCCCAATTAAG+CGG + chr1_3:60783595-60783614 None:intergenic 40.0%
TTCAAGAACAGTGAACGTGT+TGG + chr1_3:60783727-60783746 None:intergenic 40.0%
CTTATATATGCAGACCATCG+TGG - chr1_3:60783794-60783813 Msa0130480:intron 40.0%
CCCTAATTGTCAACATGTTG+TGG - chr1_3:60783909-60783928 Msa0130480:intron 40.0%
TCTTAGGAGTAAGCACAATG+GGG + chr1_3:60784211-60784230 None:intergenic 40.0%
GTCTTAGGAGTAAGCACAAT+GGG + chr1_3:60784212-60784231 None:intergenic 40.0%
TGTCTTAGGAGTAAGCACAA+TGG + chr1_3:60784213-60784232 None:intergenic 40.0%
ATGACCGTGATCAATGTCTT+AGG + chr1_3:60784227-60784246 None:intergenic 40.0%
AATCGAAGAAACTCCTCCAT+AGG - chr1_3:60784252-60784271 Msa0130480:CDS 40.0%
CAGTGTAATTAAGCCTATGG+AGG + chr1_3:60784268-60784287 None:intergenic 40.0%
GTGCAGTGTAATTAAGCCTA+TGG + chr1_3:60784271-60784290 None:intergenic 40.0%
TCTCTAAGCTATCCACTCTT+CGG - chr1_3:60784307-60784326 Msa0130480:CDS 40.0%
TATCCACTCTTCGGTTATTC+TGG - chr1_3:60784316-60784335 Msa0130480:CDS 40.0%
TTACACTTACCATAGAAGGG+TGG + chr1_3:60784661-60784680 None:intergenic 40.0%
ACTCCTTAGACACATCTACA+AGG + chr1_3:60784958-60784977 None:intergenic 40.0%
!! ATGTGTCTAAGGAGTGTCTA+TGG - chr1_3:60784963-60784982 Msa0130480:CDS 40.0%
TCTAATACGCGTCATACAAG+TGG - chr1_3:60785029-60785048 Msa0130480:intron 40.0%
TACAAGTGGCATACTTGAGT+CGG - chr1_3:60785043-60785062 Msa0130480:intron 40.0%
!! GGATCTAAAGAGTGTTGCAA+AGG - chr1_3:60785064-60785083 Msa0130480:intron 40.0%
TGAATTCAAGTCATGTGTCG+CGG + chr1_3:60785167-60785186 None:intergenic 40.0%
GCTACAACGTGAAATCTCTA+TGG + chr1_3:60785193-60785212 None:intergenic 40.0%
! ACCACCCATTTGAGATTAGA+CGG - chr1_3:60785285-60785304 Msa0130480:intron 40.0%
TTAGGGCTCAAGAATGTGAT+TGG + chr1_3:60785435-60785454 None:intergenic 40.0%
AGAGAGAAGAGAACTCTACT+GGG + chr1_3:60785498-60785517 None:intergenic 40.0%
AATGATAGGGCAATAGGTAG+AGG - chr1_3:60785858-60785877 Msa0130480:intron 40.0%
GTTGTTAGGTAACACAAGAG+TGG - chr1_3:60772010-60772029 Msa0130480:intron 40.0%
! TTAACACCTTTAGGAAGTCC+AGG + chr1_3:60786160-60786179 None:intergenic 40.0%
!! TTGCTTGCAAAAGTTGGTGA+AGG - chr1_3:60772090-60772109 Msa0130480:intron 40.0%
GCAGTGAAAGCTTATAGTAC+TGG - chr1_3:60786457-60786476 Msa0130480:intron 40.0%
! ATAGTACTGGAAGTCGAAAG+CGG - chr1_3:60786470-60786489 Msa0130480:intron 40.0%
TGAACTCCGTTCAAGAAGAT+AGG + chr1_3:60786556-60786575 None:intergenic 40.0%
TTCTTGAACGGAGTTCAGAA+AGG - chr1_3:60786559-60786578 Msa0130480:intron 40.0%
TTTCCAGAGAATGGAGGAAA+AGG - chr1_3:60786610-60786629 Msa0130480:intron 40.0%
GTATCATCTTGGAACAGAAG+AGG - chr1_3:60786660-60786679 Msa0130480:intron 40.0%
AAATTGGGACTGATAAGAGG+AGG + chr1_3:60786838-60786857 None:intergenic 40.0%
AGAAACTCACCATATTCCTC+AGG - chr1_3:60786873-60786892 Msa0130480:intron 40.0%
! AGTATAGGGGTATACAGCTT+CGG - chr1_3:60787227-60787246 Msa0130480:intron 40.0%
! ACCGCTGATTGGTTGAAAAA+AGG + chr1_3:60787432-60787451 None:intergenic 40.0%
AAAACATGGTTACCGCTGAT+TGG + chr1_3:60787443-60787462 None:intergenic 40.0%
! AATCAGCGGTAACCATGTTT+TGG - chr1_3:60787442-60787461 Msa0130480:intron 40.0%
!!! TAACCATGTTTTGGTACGCT+TGG - chr1_3:60787451-60787470 Msa0130480:intron 40.0%
ATCAAGGGAGAATTGCGAAT+TGG + chr1_3:60787532-60787551 None:intergenic 40.0%
! GAGGAAGATTTGGTAGAATC+TGG + chr1_3:60787677-60787696 None:intergenic 40.0%
AGTAGCCATTCTTCTAACTG+AGG + chr1_3:60787696-60787715 None:intergenic 40.0%
AATAGTCAGGATGACTGTGA+AGG - chr1_3:60787717-60787736 Msa0130480:intron 40.0%
ATAGTCAGGATGACTGTGAA+GGG - chr1_3:60787718-60787737 Msa0130480:intron 40.0%
TCCGAAAATTGATCTACCGA+CGG - chr1_3:60787743-60787762 Msa0130480:intron 40.0%
! ACCGTCGGTAGATCAATTTT+CGG + chr1_3:60787747-60787766 None:intergenic 40.0%
TGACATGCCACTGAATCTAT+TGG - chr1_3:60787800-60787819 Msa0130480:intron 40.0%
! CACTTCCGGAAACATTTTCT+TGG - chr1_3:60787826-60787845 Msa0130480:intron 40.0%
! TCATTTTCCCTGTGCCTTTT+CGG + chr1_3:60787879-60787898 None:intergenic 40.0%
CGACATTCGATTAAGTCAAC+TGG - chr1_3:60773845-60773864 Msa0130480:intron 40.0%
! TGGAAGATCATTGAGAGCAT+AGG + chr1_3:60788057-60788076 None:intergenic 40.0%
CTTATAGGAATTCAGCTCAC+AGG - chr1_3:60788142-60788161 Msa0130480:intron 40.0%
ATACCCAGACGTAGCCATAA+GGG + chr1_3:60768851-60768870 None:intergenic 45.0%
CTTTCCGCTGATGTTGATCA+AGG - chr1_3:60769201-60769220 Msa0130480:CDS 45.0%
TATATGGCGGCGATCACATT+AGG - chr1_3:60769228-60769247 Msa0130480:CDS 45.0%
ATATGGCGGCGATCACATTA+GGG - chr1_3:60769229-60769248 Msa0130480:CDS 45.0%
CGAGCAAATTGCAGTCGATT+AGG - chr1_3:60769278-60769297 Msa0130480:CDS 45.0%
GCAGTCGATTAGGTATGATG+TGG - chr1_3:60769288-60769307 Msa0130480:CDS 45.0%
CTATATCGCAATCACGACCT+AGG + chr1_3:60769360-60769379 None:intergenic 45.0%
ACCAAGTTGTGAAGCGATTG+TGG + chr1_3:60769454-60769473 None:intergenic 45.0%
CTTGTATATGTAGACCGTCG+TGG - chr1_3:60769849-60769868 Msa0130480:intron 45.0%
TTGACAATTTGGGCAAGCTC+TGG + chr1_3:60769957-60769976 None:intergenic 45.0%
GATATTGCATTTGGCGTGTC+AGG - chr1_3:60770067-60770086 Msa0130480:intron 45.0%
GGCGTGTCAGGTTTATTTCA+TGG - chr1_3:60770079-60770098 Msa0130480:intron 45.0%
ACTAGACATGAAGGAGGTTG+AGG + chr1_3:60770116-60770135 None:intergenic 45.0%
CTGATCAGAATCACAGGACA+AGG + chr1_3:60770368-60770387 None:intergenic 45.0%
CTTGTCCTGTGATTCTGATC+AGG - chr1_3:60770366-60770385 Msa0130480:CDS 45.0%
AGCTATCAAGAATCCGAGCA+AGG + chr1_3:60770419-60770438 None:intergenic 45.0%
! TTAAGGGGAGTACATGGGAA+TGG + chr1_3:60770486-60770505 None:intergenic 45.0%
! GAGGATTAAGGGGAGTACAT+GGG + chr1_3:60770491-60770510 None:intergenic 45.0%
! AGAGGATTAAGGGGAGTACA+TGG + chr1_3:60770492-60770511 None:intergenic 45.0%
CACGAAAAAAGGCAGTACAG+AGG + chr1_3:60770742-60770761 None:intergenic 45.0%
! TGAGATTTTCACAACGTGCC+AGG - chr1_3:60770799-60770818 Msa0130480:CDS 45.0%
ATGGGAATGGATGAAGCAGA+AGG + chr1_3:60770868-60770887 None:intergenic 45.0%
AGATTTCTTAGTCTGCCCCA+TGG - chr1_3:60770946-60770965 Msa0130480:intron 45.0%
ATTGAGTCCCTTCTTGTCGA+CGG - chr1_3:60771059-60771078 Msa0130480:intron 45.0%
TTGAATGCCGTCGACAAGAA+GGG + chr1_3:60771069-60771088 None:intergenic 45.0%
TACAGGTCTTCCCATCACAT+AGG + chr1_3:60771243-60771262 None:intergenic 45.0%
!! CATTCATAGGGTTGGCTACA+TGG + chr1_3:60771428-60771447 None:intergenic 45.0%
TGGCACTTGCTTGCAAAAGT+TGG - chr1_3:60772084-60772103 Msa0130480:intron 45.0%
TAAAGCTTAGACAGTCCACC+TGG + chr1_3:60772204-60772223 None:intergenic 45.0%
AATGTAGGTGTTTCGCGAGA+TGG - chr1_3:60772282-60772301 Msa0130480:intron 45.0%
GAGGATAGGTTTAGTCCTTC+CGG + chr1_3:60772415-60772434 None:intergenic 45.0%
TATATGACTCCAGAGAGTGG+AGG - chr1_3:60772477-60772496 Msa0130480:intron 45.0%
CATCCTCTTCTGTTCCAAGA+TGG + chr1_3:60772539-60772558 None:intergenic 45.0%
! CCGAGGTTTCAGGAACATTT+TGG + chr1_3:60772635-60772654 None:intergenic 45.0%
GAACATTGCTTCTCATTGCG+AGG + chr1_3:60772714-60772733 None:intergenic 45.0%
TGGTTCGTGATGGTAGTTTG+TGG - chr1_3:60773316-60773335 Msa0130480:CDS 45.0%
AATTCACAGCAACTTGCGGA+AGG - chr1_3:60773537-60773556 Msa0130480:intron 45.0%
CAGTGTCAGCGTCAAGATTA+AGG + chr1_3:60773749-60773768 None:intergenic 45.0%
ACAGGATAGTTACGTTGCGT+GGG - chr1_3:60773985-60774004 Msa0130480:intron 45.0%
TAGTAACACTCATGCTTCCC+TGG + chr1_3:60774484-60774503 None:intergenic 45.0%
TATTGTTATAGGCCTTGGCC+CGG - chr1_3:60774589-60774608 Msa0130480:intron 45.0%
AACAAGAAAACACCCCCAGA+CGG + chr1_3:60774619-60774638 None:intergenic 45.0%
CTTAGTCGATAAAAGGAGGC+CGG + chr1_3:60774659-60774678 None:intergenic 45.0%
!! AAAGGGCACTTTCCCATCAT+GGG + chr1_3:60775189-60775208 None:intergenic 45.0%
!! TAAAGGGCACTTTCCCATCA+TGG + chr1_3:60775190-60775209 None:intergenic 45.0%
!! GAAAGTGCCCTTTACAACCA+TGG - chr1_3:60775196-60775215 Msa0130480:intron 45.0%
! GATAAGCGTGAATGGGTTTC+TGG + chr1_3:60775362-60775381 None:intergenic 45.0%
AGCAATCTTCATGGTGCATG+GGG + chr1_3:60775414-60775433 None:intergenic 45.0%
TTTGTGTACCTGTGAAGCGT+TGG - chr1_3:60775557-60775576 Msa0130480:intron 45.0%
! GATTGATTCCAACGCTTCAC+AGG + chr1_3:60775568-60775587 None:intergenic 45.0%
! AAGTTCCCTTTTTCCAGGAC+AGG + chr1_3:60775859-60775878 None:intergenic 45.0%
! TGGGAAAGTTCCCTTTTTCC+AGG + chr1_3:60775864-60775883 None:intergenic 45.0%
GGAAAAAGGGAACTTTCCCA+TGG - chr1_3:60775864-60775883 Msa0130480:intron 45.0%
CAACATCAGTCGTTTAGCCT+GGG + chr1_3:60775898-60775917 None:intergenic 45.0%
TCTCATCGAAGAAATGCGGT+AGG - chr1_3:60776033-60776052 Msa0130480:intron 45.0%
TGATCAGAATGGCAACGGAA+AGG - chr1_3:60776301-60776320 Msa0130480:intron 45.0%
AGAAAGACATAGCAGAGGCA+TGG - chr1_3:60776324-60776343 Msa0130480:intron 45.0%
AAAGAACCTGGTCGCATCTT+CGG + chr1_3:60776525-60776544 None:intergenic 45.0%
GATGTGAAACGCAACTATGC+CGG + chr1_3:60776804-60776823 None:intergenic 45.0%
TATATAACCCGTGCGTTGCA+CGG - chr1_3:60777889-60777908 Msa0130480:intron 45.0%
AATAAAACCCGTGCAACGCA+CGG + chr1_3:60777900-60777919 None:intergenic 45.0%
!!! TGCGTTGCACGGGTTTTATT+AGG - chr1_3:60777900-60777919 Msa0130480:intron 45.0%
AGACCATCTTAACACGACAG+TGG - chr1_3:60778148-60778167 Msa0130480:intron 45.0%
GAACCACTGTCGTGTTAAGA+TGG + chr1_3:60778154-60778173 None:intergenic 45.0%
!!! GTGCTGATTTTCCTGGCTTT+TGG - chr1_3:60778571-60778590 Msa0130480:intron 45.0%
GAACCGCTGTCGTGTTAAAA+TGG + chr1_3:60778683-60778702 None:intergenic 45.0%
! TAATCTAGGGTTCTCCCATG+AGG - chr1_3:60779283-60779302 Msa0130480:intron 45.0%
CTACAAGAGGAGTCACATGT+TGG + chr1_3:60780036-60780055 None:intergenic 45.0%
AAATGATTGGGGGTAAGTGG+TGG - chr1_3:60780787-60780806 Msa0130480:intron 45.0%
GGGGTAAGTGGTGGTTATAA+AGG - chr1_3:60780796-60780815 Msa0130480:intron 45.0%
ATTGGGGAAGGGGTGAATTT+AGG - chr1_3:60781830-60781849 Msa0130480:intron 45.0%
TTGGGGAAGGGGTGAATTTA+GGG - chr1_3:60781831-60781850 Msa0130480:intron 45.0%
AAGGGGTGAATTTAGGGGAA+GGG - chr1_3:60781837-60781856 Msa0130480:intron 45.0%
AGGGATCCCTAAATGCCTAT+TGG + chr1_3:60782922-60782941 None:intergenic 45.0%
AAACAGCGGCACATACCTAA+TGG + chr1_3:60783110-60783129 None:intergenic 45.0%
TTGCAATCGTGATGTGGTCA+AGG - chr1_3:60783138-60783157 Msa0130480:intron 45.0%
ACTGCTTCACGATTGTATCG+TGG - chr1_3:60783182-60783201 Msa0130480:CDS 45.0%
TGCGACTGCTATTGTCGTTA+TGG - chr1_3:60783243-60783262 Msa0130480:CDS 45.0%
! TGAGATCCTCCATTTTGCAG+AGG - chr1_3:60783304-60783323 Msa0130480:CDS 45.0%
AACCACATGTAGCTTATGCG+GGG - chr1_3:60783332-60783351 Msa0130480:CDS 45.0%
GCACAATTGCAGTTGCATTG+TGG - chr1_3:60783354-60783373 Msa0130480:CDS 45.0%
GGTTTGAATCGTGGATGATG+TGG + chr1_3:60783520-60783539 None:intergenic 45.0%
GAGGTTGCAATGAGCAATGA+AGG + chr1_3:60783620-60783639 None:intergenic 45.0%
AACGTGTTGGAGGTTGCAAT+GGG + chr1_3:60783714-60783733 None:intergenic 45.0%
AAGAACAGTGAACGTGTTGG+AGG + chr1_3:60783724-60783743 None:intergenic 45.0%
TATATGCAGACCATCGTGGT+TGG - chr1_3:60783798-60783817 Msa0130480:intron 45.0%
GTACACTTGCAACCGCTATA+AGG - chr1_3:60783830-60783849 Msa0130480:intron 45.0%
TCCAGATGCACACCTTATAG+CGG + chr1_3:60783845-60783864 None:intergenic 45.0%
GGATAGCTTAGAGAGACAAG+TGG + chr1_3:60784301-60784320 None:intergenic 45.0%
AGTGCATTTCGTGCTTTCGT+TGG + chr1_3:60784584-60784603 None:intergenic 45.0%
TTACCATAGAAGGGTGGTGT+GGG + chr1_3:60784655-60784674 None:intergenic 45.0%
GTTGTTTGTACCGCATAGCA+TGG - chr1_3:60784708-60784727 Msa0130480:intron 45.0%
GACACTCGTACGACACATAT+CGG + chr1_3:60785122-60785141 None:intergenic 45.0%
GATATGTGTCGTACGAGTGT+CGG - chr1_3:60785121-60785140 Msa0130480:intron 45.0%
GGCAGTCGAAGTTTCAAACA+CGG - chr1_3:60785239-60785258 Msa0130480:intron 45.0%
TGGGCCGTCTAATCTCAAAT+GGG + chr1_3:60785292-60785311 None:intergenic 45.0%
ATGGGCCGTCTAATCTCAAA+TGG + chr1_3:60785293-60785312 None:intergenic 45.0%
GAGAGAAGAGAACTCTACTG+GGG + chr1_3:60785497-60785516 None:intergenic 45.0%
CAGAGAGAAGAGAACTCTAC+TGG + chr1_3:60785499-60785518 None:intergenic 45.0%
TTCCTGTGTGATTAGGGCTT+TGG - chr1_3:60785789-60785808 Msa0130480:intron 45.0%
TGGCACTTGCTTGCAAAAGT+TGG - chr1_3:60772084-60772103 Msa0130480:intron 45.0%
! AATGCATCGATGAAAGGGTG+AGG + chr1_3:60786250-60786269 None:intergenic 45.0%
! AAGAGTTTGCTTATGTCCGC+TGG - chr1_3:60786509-60786528 Msa0130480:intron 45.0%
TTGGAACAGAAGAGGATGAG+AGG - chr1_3:60786668-60786687 Msa0130480:intron 45.0%
TGGAACAGAAGAGGATGAGA+GGG - chr1_3:60786669-60786688 Msa0130480:intron 45.0%
TCAAGATGTTCCTGAAACCG+CGG - chr1_3:60786759-60786778 Msa0130480:intron 45.0%
ATTCGCAATAGTTGCTTCCG+CGG + chr1_3:60786779-60786798 None:intergenic 45.0%
GGTTCAGTGGTCGCAAAATT+GGG + chr1_3:60786817-60786836 None:intergenic 45.0%
AGGTTCAGTGGTCGCAAAAT+TGG + chr1_3:60786818-60786837 None:intergenic 45.0%
ACTGATAAGAGGAGGTTCAG+TGG + chr1_3:60786830-60786849 None:intergenic 45.0%
AGAGTGGAGAGTGAGAAACT+TGG + chr1_3:60787340-60787359 None:intergenic 45.0%
! ATCACCATGAGTTGAGGACT+GGG + chr1_3:60787381-60787400 None:intergenic 45.0%
! AATCACCATGAGTTGAGGAC+TGG + chr1_3:60787382-60787401 None:intergenic 45.0%
GAACCAAGCGTACCAAAACA+TGG + chr1_3:60787457-60787476 None:intergenic 45.0%
! AGTACCGAATTCGGGTACTT+CGG + chr1_3:60787503-60787522 None:intergenic 45.0%
!! TGGTACGTGAGTACCGAATT+CGG + chr1_3:60787512-60787531 None:intergenic 45.0%
TTCAAAGCCAGTCTCCGAAA+AGG - chr1_3:60787862-60787881 Msa0130480:intron 45.0%
CATATGTCGAAAGACTAGGC+TGG + chr1_3:60787914-60787933 None:intergenic 45.0%
TGCCAAAATCTTGACCACAC+TGG - chr1_3:60787975-60787994 Msa0130480:intron 45.0%
! TGCCAGTGTGGTCAAGATTT+TGG + chr1_3:60787980-60787999 None:intergenic 45.0%
! TCACAGGAGCTATATCGACT+AGG - chr1_3:60788158-60788177 Msa0130480:exon 45.0%
! CACAGGAGCTATATCGACTA+GGG - chr1_3:60788159-60788178 Msa0130480:exon 45.0%
!!! TATATTATAGTTTATTTTAA+TGG + chr1_3:60776378-60776397 None:intergenic 5.0%
!!! ATAGTATAATTTATATTTTT+TGG - chr1_3:60777930-60777949 Msa0130480:intron 5.0%
!! AAAAAAAAATCAAATATATT+CGG + chr1_3:60778724-60778743 None:intergenic 5.0%
!! TAAATATTAAATAAAAATTG+GGG - chr1_3:60781814-60781833 Msa0130480:intron 5.0%
GAGAGTCTCTCTCTCCCTTA+TGG - chr1_3:60768834-60768853 Msa0130480:CDS 50.0%
TCTCCCTTATGGCTACGTCT+GGG - chr1_3:60768845-60768864 Msa0130480:CDS 50.0%
CATACCCAGACGTAGCCATA+AGG + chr1_3:60768852-60768871 None:intergenic 50.0%
GCCACAATCGCTTCACAACT+TGG - chr1_3:60769450-60769469 Msa0130480:intron 50.0%
TATATGTAGACCGTCGTGGC+TGG - chr1_3:60769853-60769872 Msa0130480:intron 50.0%
! CAATTTGGGCAAGCTCTGGT+AGG + chr1_3:60769953-60769972 None:intergenic 50.0%
ATCCGAGCAAGGCTGCATTT+GGG + chr1_3:60770408-60770427 None:intergenic 50.0%
AATCCGAGCAAGGCTGCATT+TGG + chr1_3:60770409-60770428 None:intergenic 50.0%
TTGGTTGGAGACGTTGTGAG+AGG + chr1_3:60770628-60770647 None:intergenic 50.0%
ATGTGGTTGTGGGTCTGTCT+TGG + chr1_3:60770647-60770666 None:intergenic 50.0%
TGTGTGCCGTGTTATGGGAA+TGG + chr1_3:60770881-60770900 None:intergenic 50.0%
GTTGAATGCCGTCGACAAGA+AGG + chr1_3:60771070-60771089 None:intergenic 50.0%
GTCGACGGCATTCAACAGTT+TGG - chr1_3:60771074-60771093 Msa0130480:intron 50.0%
!! AAGGAAGGCATCAGTCACAC+AGG - chr1_3:60771673-60771692 Msa0130480:intron 50.0%
TAGGTAACACAAGAGTGGCC+TGG - chr1_3:60772015-60772034 Msa0130480:intron 50.0%
ACTCATCCTCAGCGTTTACC+AGG - chr1_3:60772183-60772202 Msa0130480:intron 50.0%
TGAAGCCCGTTCAAGAGGAT+AGG + chr1_3:60772429-60772448 None:intergenic 50.0%
!! CTTTCTGAAGCCCGTTCAAG+AGG + chr1_3:60772434-60772453 None:intergenic 50.0%
! CTCTTGAACGGGCTTCAGAA+AGG - chr1_3:60772432-60772451 Msa0130480:intron 50.0%
! TCAGCTTTTCCTCCACTCTC+TGG + chr1_3:60772489-60772508 None:intergenic 50.0%
CAGCAGCAGCAAGCCAAATT+GGG - chr1_3:60772597-60772616 Msa0130480:intron 50.0%
ACAGTTGCTTCCGAGGTTTC+AGG + chr1_3:60772645-60772664 None:intergenic 50.0%
TTCTCATTGCGAGGAGGTTC+AGG + chr1_3:60772705-60772724 None:intergenic 50.0%
CATTGCTTCTCATTGCGAGG+AGG + chr1_3:60772711-60772730 None:intergenic 50.0%
GCGGCAAACATGCATCTGTT+GGG + chr1_3:60773134-60773153 None:intergenic 50.0%
AGCGGCAAACATGCATCTGT+TGG + chr1_3:60773135-60773154 None:intergenic 50.0%
TTCAGAGCCAGTCTCCGAAA+AGG - chr1_3:60773583-60773602 Msa0130480:intron 50.0%
TCAGAGCCAGTCTCCGAAAA+GGG - chr1_3:60773584-60773603 Msa0130480:intron 50.0%
! CCGTTTTCCCCATCCCTTTT+CGG + chr1_3:60773600-60773619 None:intergenic 50.0%
CCGAAAAGGGATGGGGAAAA+CGG - chr1_3:60773597-60773616 Msa0130480:intron 50.0%
TGGGGAAAACGGAGAGCAAA+TGG - chr1_3:60773608-60773627 Msa0130480:intron 50.0%
CACAGGATAGTTACGTTGCG+TGG - chr1_3:60773984-60774003 Msa0130480:intron 50.0%
CAGGATAGTTACGTTGCGTG+GGG - chr1_3:60773986-60774005 Msa0130480:intron 50.0%
!!! TGCCTTTTGGGGCAAAGACT+GGG - chr1_3:60775132-60775151 Msa0130480:intron 50.0%
AGACTGGGTGACGTTTAGCA+TGG - chr1_3:60775147-60775166 Msa0130480:intron 50.0%
GACTGGGTGACGTTTAGCAT+GGG - chr1_3:60775148-60775167 Msa0130480:intron 50.0%
GGTAGGTAAAGAGAAGGCAG+TGG + chr1_3:60775340-60775359 None:intergenic 50.0%
! TTCCCTTTTTCCAGGACAGG+TGG + chr1_3:60775856-60775875 None:intergenic 50.0%
CAGTCGTTTAGCCTGGGAAA+AGG + chr1_3:60775892-60775911 None:intergenic 50.0%
CCAACATCAGTCGTTTAGCC+TGG + chr1_3:60775899-60775918 None:intergenic 50.0%
CCAGGCTAAACGACTGATGT+TGG - chr1_3:60775896-60775915 Msa0130480:intron 50.0%
! AAGACATAGCAGAGGCATGG+CGG - chr1_3:60776327-60776346 Msa0130480:intron 50.0%
TTGGCGACTGAAGTTGTCCT+TGG - chr1_3:60776589-60776608 Msa0130480:intron 50.0%
TTTCATACGACGTGCAGCAG+AGG + chr1_3:60776775-60776794 None:intergenic 50.0%
ATGAAAGGGCGGAATACGAG+CGG - chr1_3:60777826-60777845 Msa0130480:intron 50.0%
ATATAACCCGTGCGTTGCAC+GGG - chr1_3:60777890-60777909 Msa0130480:intron 50.0%
ATAAAACCCGTGCAACGCAC+GGG + chr1_3:60777899-60777918 None:intergenic 50.0%
AACCTGAAGAGGTGAACCGA+TGG - chr1_3:60780669-60780688 Msa0130480:CDS 50.0%
! AGAAAGGAGAGGCTTTGGTG+AGG - chr1_3:60781080-60781099 Msa0130480:intron 50.0%
GCGTACCCCACTTAAAACTG+AGG - chr1_3:60781473-60781492 Msa0130480:intron 50.0%
TGGGGAAGGGGTGAATTTAG+GGG - chr1_3:60781832-60781851 Msa0130480:intron 50.0%
GAAGGGGTGAATTTAGGGGA+AGG - chr1_3:60781836-60781855 Msa0130480:intron 50.0%
AGGGGTGAATTTAGGGGAAG+GGG - chr1_3:60781838-60781857 Msa0130480:intron 50.0%
TGAGTGTGGATGAGAGAGAG+AGG + chr1_3:60782129-60782148 None:intergenic 50.0%
CGGTTGTGATGCAACCATAG+AGG - chr1_3:60782709-60782728 Msa0130480:intron 50.0%
TTGCAGTTGCATTGTGGTCG+TGG - chr1_3:60783360-60783379 Msa0130480:CDS 50.0%
GGAATCCCGACAACATACCT+AGG + chr1_3:60783498-60783517 None:intergenic 50.0%
CATCCACGATTCAAACCCGT+TGG - chr1_3:60783523-60783542 Msa0130480:CDS 50.0%
! AGTCCAACGGGTTTGAATCG+TGG + chr1_3:60783529-60783548 None:intergenic 50.0%
CTAGGGCCGAATCAGAATGA+AGG + chr1_3:60783572-60783591 None:intergenic 50.0%
ATCCCCCAATTAAGCGGCTA+GGG + chr1_3:60783589-60783608 None:intergenic 50.0%
AATCCCCCAATTAAGCGGCT+AGG + chr1_3:60783590-60783609 None:intergenic 50.0%
AGCCGCTTAATTGGGGGATT+TGG - chr1_3:60783590-60783609 Msa0130480:CDS 50.0%
AAGAACAGTGAACGCGTTGG+AGG + chr1_3:60783639-60783658 None:intergenic 50.0%
TCCAACGCGTTCACTGTTCT+TGG - chr1_3:60783638-60783657 Msa0130480:intron 50.0%
CCAACGCGTTCACTGTTCTT+GGG - chr1_3:60783639-60783658 Msa0130480:intron 50.0%
TCCCACATCATCCATGCTTC+AGG - chr1_3:60783663-60783682 Msa0130480:intron 50.0%
GCCTGAAGCATGGATGATGT+GGG + chr1_3:60783667-60783686 None:intergenic 50.0%
ATCCATGCTTCAGGCCCATT+GGG - chr1_3:60783672-60783691 Msa0130480:intron 50.0%
GAACGTGTTGGAGGTTGCAA+TGG + chr1_3:60783715-60783734 None:intergenic 50.0%
ACCGCTATAAGGTGTGCATC+TGG - chr1_3:60783841-60783860 Msa0130480:intron 50.0%
TTGACAATTAGGGCACGCTC+TGG + chr1_3:60783902-60783921 None:intergenic 50.0%
CGACCAGAATAACCGAAGAG+TGG + chr1_3:60784322-60784341 None:intergenic 50.0%
TCTGGTCGATGACATTCGTC+AGG - chr1_3:60784334-60784353 Msa0130480:CDS 50.0%
GTCGATGACATTCGTCAGGT+TGG - chr1_3:60784338-60784357 Msa0130480:CDS 50.0%
TTTCCCACACCACCCTTCTA+TGG - chr1_3:60784649-60784668 Msa0130480:CDS 50.0%
CTTACCATAGAAGGGTGGTG+TGG + chr1_3:60784656-60784675 None:intergenic 50.0%
GCCGTCTAATCTCAAATGGG+TGG + chr1_3:60785289-60785308 None:intergenic 50.0%
TTTCTGTTGGCAAGCAGGCA+AGG + chr1_3:60785681-60785700 None:intergenic 50.0%
AAGGGTTTCTGTTGGCAAGC+AGG + chr1_3:60785686-60785705 None:intergenic 50.0%
CTCCAAAGCCCTAATCACAC+AGG + chr1_3:60785794-60785813 None:intergenic 50.0%
TAGGTAACACAAGAGTGGCC+TGG - chr1_3:60772015-60772034 Msa0130480:intron 50.0%
ACTCATCCTCAGCATTTGCC+AGG - chr1_3:60786307-60786326 Msa0130480:intron 50.0%
TATCCACCTGGCAAATGCTG+AGG + chr1_3:60786316-60786335 None:intergenic 50.0%
CGAAAGCGGCGAAGAATATG+TGG - chr1_3:60786484-60786503 Msa0130480:intron 50.0%
! TCTTTCCAGTCTTGTGCCAG+CGG + chr1_3:60786528-60786547 None:intergenic 50.0%
! GCACCTTTTCCTCCATTCTC+TGG + chr1_3:60786616-60786635 None:intergenic 50.0%
ACAGAAGAGGATGAGAGGGA+AGG - chr1_3:60786673-60786692 Msa0130480:intron 50.0%
CAGAAGAGGATGAGAGGGAA+GGG - chr1_3:60786674-60786693 Msa0130480:intron 50.0%
CAGCAGCAGCAAGCCATATT+GGG - chr1_3:60786724-60786743 Msa0130480:intron 50.0%
ATAGTTGCTTCCGCGGTTTC+AGG + chr1_3:60786772-60786791 None:intergenic 50.0%
TATACAGCTTCGGTACGCTC+CGG - chr1_3:60787237-60787256 Msa0130480:intron 50.0%
!! TTTTGGTACGCTTGGTTCGC+TGG - chr1_3:60787459-60787478 Msa0130480:intron 50.0%
ATTCGGGTACTTCGGCGTAT+TGG + chr1_3:60787495-60787514 None:intergenic 50.0%
! TACGCCGAAGTACCCGAATT+CGG - chr1_3:60787496-60787515 Msa0130480:intron 50.0%
!! GGTACGTGAGTACCGAATTC+GGG + chr1_3:60787511-60787530 None:intergenic 50.0%
CAAGCTCTACATTGCCAGTG+TGG + chr1_3:60787992-60788011 None:intergenic 50.0%
! AGGAGCTATATCGACTAGGG+TGG - chr1_3:60788162-60788181 Msa0130480:five_prime_UTR 50.0%
CTCTCCCTTATGGCTACGTC+TGG - chr1_3:60768844-60768863 Msa0130480:CDS 55.0%
CGATTGTGGCAGCGACATTC+AGG + chr1_3:60769440-60769459 None:intergenic 55.0%
! CTTTTGTCCACCAGCCACGA+CGG + chr1_3:60769866-60769885 None:intergenic 55.0%
CTCCCAAATGCAGCCTTGCT+CGG - chr1_3:60770403-60770422 Msa0130480:CDS 55.0%
GGTTGTGGGTCTGTCTTGGT+TGG + chr1_3:60770643-60770662 None:intergenic 55.0%
AAGCAGAAGGCTGCAGAGAC+AGG + chr1_3:60770855-60770874 None:intergenic 55.0%
AGATGGCTTCGAGAAGCGAG+TGG + chr1_3:60771038-60771057 None:intergenic 55.0%
GAGTGGCCTGGATTACCTAG+AGG - chr1_3:60772027-60772046 Msa0130480:intron 55.0%
CATCCTCAGCGTTTACCAGG+TGG - chr1_3:60772186-60772205 Msa0130480:intron 55.0%
AGTCCACCTGGTAAACGCTG+AGG + chr1_3:60772192-60772211 None:intergenic 55.0%
!! AAGATTTTGGCGACGTCCGC+TGG - chr1_3:60772382-60772401 Msa0130480:intron 55.0%
!! CCAATTTGGCTTGCTGCTGC+TGG + chr1_3:60772599-60772618 None:intergenic 55.0%
CCAGCAGCAGCAAGCCAAAT+TGG - chr1_3:60772596-60772615 Msa0130480:intron 55.0%
GTCACGGAATTGGGAGTGAC+TGG + chr1_3:60772681-60772700 None:intergenic 55.0%
GGTTCAGGCGTCACGGAATT+GGG + chr1_3:60772690-60772709 None:intergenic 55.0%
AGGTTCAGGCGTCACGGAAT+TGG + chr1_3:60772691-60772710 None:intergenic 55.0%
AGCCAGTCTCCGAAAAGGGA+TGG - chr1_3:60773588-60773607 Msa0130480:intron 55.0%
GCCAGTCTCCGAAAAGGGAT+GGG - chr1_3:60773589-60773608 Msa0130480:intron 55.0%
CCAGTCTCCGAAAAGGGATG+GGG - chr1_3:60773590-60773609 Msa0130480:intron 55.0%
GATAGTTACGTTGCGTGGGG+TGG - chr1_3:60773989-60774008 Msa0130480:intron 55.0%
GGAGGCCGGAATTAGACGAA+TGG + chr1_3:60774645-60774664 None:intergenic 55.0%
TAGGGGTTGAGCAACTTGGG+AGG - chr1_3:60775012-60775031 Msa0130480:intron 55.0%
!!! GTGCCTTTTGGGGCAAAGAC+TGG - chr1_3:60775131-60775150 Msa0130480:intron 55.0%
CACCCAGTCTTTGCCCCAAA+AGG + chr1_3:60775137-60775156 None:intergenic 55.0%
! GCGTGAATGGGTTTCTGGGT+AGG + chr1_3:60775357-60775376 None:intergenic 55.0%
! CCTTTTTCCAGGACAGGTGG+CGG + chr1_3:60775853-60775872 None:intergenic 55.0%
CGCCACCTGTCCTGGAAAAA+GGG - chr1_3:60775851-60775870 Msa0130480:intron 55.0%
! TTCCCATGGTGCCTTTTCCC+AGG - chr1_3:60775878-60775897 Msa0130480:intron 55.0%
!! AGCCTGGGAAAAGGCACCAT+GGG + chr1_3:60775883-60775902 None:intergenic 55.0%
!! TAGCCTGGGAAAAGGCACCA+TGG + chr1_3:60775884-60775903 None:intergenic 55.0%
TTACAGCCGAAGATGCGACC+AGG - chr1_3:60776516-60776535 Msa0130480:intron 55.0%
ACCATACATGGGGTAGAGCG+TGG - chr1_3:60776921-60776940 Msa0130480:intron 55.0%
ACCACGCTCTACCCCATGTA+TGG + chr1_3:60776925-60776944 None:intergenic 55.0%
GTAATAGGGGTCTCGGCACT+TGG - chr1_3:60778474-60778493 Msa0130480:intron 55.0%
!! CTCCATCGGTTCACCTCTTC+AGG + chr1_3:60780674-60780693 None:intergenic 55.0%
GGATGCAACCACCAAGATCG+AGG - chr1_3:60783024-60783043 Msa0130480:intron 55.0%
TGCCCCGCATAAGCTACATG+TGG + chr1_3:60783337-60783356 None:intergenic 55.0%
TTCGGCCCTAGCCGCTTAAT+TGG - chr1_3:60783581-60783600 Msa0130480:CDS 55.0%
TCGGCCCTAGCCGCTTAATT+GGG - chr1_3:60783582-60783601 Msa0130480:CDS 55.0%
CCCAAGAACAGTGAACGCGT+TGG + chr1_3:60783642-60783661 None:intergenic 55.0%
GGCCTGAAGCATGGATGATG+TGG + chr1_3:60783668-60783687 None:intergenic 55.0%
CATCCATGCTTCAGGCCCAT+TGG - chr1_3:60783671-60783690 Msa0130480:intron 55.0%
ATGCAGACCATCGTGGTTGG+TGG - chr1_3:60783801-60783820 Msa0130480:intron 55.0%
CAATTAGGGCACGCTCTGGT+AGG + chr1_3:60783898-60783917 None:intergenic 55.0%
TGTGTCGCGGTGTCTGACAT+GGG + chr1_3:60785154-60785173 None:intergenic 55.0%
ATGTGTCGCGGTGTCTGACA+TGG + chr1_3:60785155-60785174 None:intergenic 55.0%
GAGTGGCCTGGACTTCCTAA+AGG - chr1_3:60786151-60786170 Msa0130480:intron 55.0%
CATCCTCAGCATTTGCCAGG+TGG - chr1_3:60786310-60786329 Msa0130480:intron 55.0%
TATGTCCGCTGGCACAAGAC+TGG - chr1_3:60786520-60786539 Msa0130480:intron 55.0%
!! CCAATATGGCTTGCTGCTGC+TGG + chr1_3:60786726-60786745 None:intergenic 55.0%
CCAGCAGCAGCAAGCCATAT+TGG - chr1_3:60786723-60786742 Msa0130480:intron 55.0%
CTCACCCAGTCCTCAACTCA+TGG - chr1_3:60787374-60787393 Msa0130480:intron 55.0%
! CCAGTCTCCGAAAAGGCACA+GGG - chr1_3:60787869-60787888 Msa0130480:intron 55.0%
ATGTAGACCGTCGTGGCTGG+TGG - chr1_3:60769856-60769875 Msa0130480:intron 60.0%
! CGTCGTGGCTGGTGGACAAA+AGG - chr1_3:60769864-60769883 Msa0130480:intron 60.0%
! TCCTTCCGGTCTTGTGCCAG+CGG + chr1_3:60772401-60772420 None:intergenic 60.0%
! CCCCATCCCTTTTCGGAGAC+TGG + chr1_3:60773593-60773612 None:intergenic 60.0%
GTTATAGGCCTTGGCCCGGT+CGG - chr1_3:60774593-60774612 Msa0130480:intron 60.0%
CCGCCACCTGTCCTGGAAAA+AGG - chr1_3:60775850-60775869 Msa0130480:intron 60.0%
AAGGGCGGAATACGAGCGGT+TGG - chr1_3:60777830-60777849 Msa0130480:intron 60.0%
CGGCCCTAGCCGCTTAATTG+GGG - chr1_3:60783583-60783602 Msa0130480:CDS 60.0%
GGCCCTAGCCGCTTAATTGG+GGG - chr1_3:60783584-60783603 Msa0130480:CDS 60.0%
GCCTCACACTTGGGCCCAAT+GGG + chr1_3:60783689-60783708 None:intergenic 60.0%
CATTGGGCCCAAGTGTGAGG+CGG - chr1_3:60783688-60783707 Msa0130480:intron 60.0%
CAATGGGCCGCCTCACACTT+GGG + chr1_3:60783698-60783717 None:intergenic 60.0%
! GCCAGTCTCCGAAAAGGCAC+AGG - chr1_3:60787868-60787887 Msa0130480:intron 60.0%
! CCCTGTGCCTTTTCGGAGAC+TGG + chr1_3:60787872-60787891 None:intergenic 60.0%
GACGTCCGCTGGCACAAGAC+CGG - chr1_3:60772393-60772412 Msa0130480:intron 65.0%
TCCGCTGGCACAAGACCGGA+AGG - chr1_3:60772397-60772416 Msa0130480:intron 65.0%
GCGAGGAGGTTCAGGCGTCA+CGG + chr1_3:60772697-60772716 None:intergenic 65.0%
! GTGGCGGTTGCTACTGGCTG+TGG + chr1_3:60775837-60775856 None:intergenic 65.0%
! GGACAGGTGGCGGTTGCTAC+TGG + chr1_3:60775843-60775862 None:intergenic 65.0%
GTAGCAACCGCCACCTGTCC+TGG - chr1_3:60775843-60775862 Msa0130480:intron 65.0%
GGCCCAATGGGCCTGAAGCA+TGG + chr1_3:60783677-60783696 None:intergenic 65.0%
GCCCATTGGGCCCAAGTGTG+AGG - chr1_3:60783685-60783704 Msa0130480:intron 65.0%
CGCCTCACACTTGGGCCCAA+TGG + chr1_3:60783690-60783709 None:intergenic 65.0%
GCAATGGGCCGCCTCACACT+TGG + chr1_3:60783699-60783718 None:intergenic 65.0%
AACACCCCCAGACGGCCGAC+CGG + chr1_3:60774611-60774630 None:intergenic 70.0%
CTTGGCCCGGTCGGCCGTCT+GGG - chr1_3:60774602-60774621 Msa0130480:intron 75.0%
TTGGCCCGGTCGGCCGTCTG+GGG - chr1_3:60774603-60774622 Msa0130480:intron 75.0%
ACACCCCCAGACGGCCGACC+GGG + chr1_3:60774610-60774629 None:intergenic 75.0%
! CCAGACGGCCGACCGGGCCA+AGG + chr1_3:60774604-60774623 None:intergenic 80.0%
! CCTTGGCCCGGTCGGCCGTC+TGG - chr1_3:60774601-60774620 Msa0130480:intron 80.0%
! TGGCCCGGTCGGCCGTCTGG+GGG - chr1_3:60774604-60774623 Msa0130480:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 60768826 60788187 60768826 ID=Msa0130480;Name=Msa0130480
chr1_3 mRNA 60768826 60788187 60768826 ID=Msa0130480-mRNA-1;Parent=Msa0130480;Name=Msa0130480-mRNA-1;_AED=0.20;_eAED=0.20;_QI=27|0.12|0.29|0.58|1|1|17|0|1034
chr1_3 exon 60768826 60768864 60768826 ID=Msa0130480-mRNA-1:exon:20062;Parent=Msa0130480-mRNA-1
chr1_3 exon 60768967 60769335 60768967 ID=Msa0130480-mRNA-1:exon:20061;Parent=Msa0130480-mRNA-1
chr1_3 exon 60770119 60770597 60770119 ID=Msa0130480-mRNA-1:exon:20060;Parent=Msa0130480-mRNA-1
chr1_3 exon 60770685 60770871 60770685 ID=Msa0130480-mRNA-1:exon:20059;Parent=Msa0130480-mRNA-1
chr1_3 exon 60773071 60773206 60773071 ID=Msa0130480-mRNA-1:exon:20058;Parent=Msa0130480-mRNA-1
chr1_3 exon 60773312 60773421 60773312 ID=Msa0130480-mRNA-1:exon:20057;Parent=Msa0130480-mRNA-1
chr1_3 exon 60780227 60780295 60780227 ID=Msa0130480-mRNA-1:exon:20056;Parent=Msa0130480-mRNA-1
chr1_3 exon 60780392 60780524 60780392 ID=Msa0130480-mRNA-1:exon:20055;Parent=Msa0130480-mRNA-1
chr1_3 exon 60780644 60780726 60780644 ID=Msa0130480-mRNA-1:exon:20054;Parent=Msa0130480-mRNA-1
chr1_3 exon 60783147 60783617 60783147 ID=Msa0130480-mRNA-1:exon:20053;Parent=Msa0130480-mRNA-1
chr1_3 exon 60784240 60784724 60784240 ID=Msa0130480-mRNA-1:exon:20052;Parent=Msa0130480-mRNA-1
chr1_3 exon 60784809 60784995 60784809 ID=Msa0130480-mRNA-1:exon:20051;Parent=Msa0130480-mRNA-1
chr1_3 exon 60786159 60786245 60786159 ID=Msa0130480-mRNA-1:exon:20050;Parent=Msa0130480-mRNA-1
chr1_3 exon 60786569 60786625 60786569 ID=Msa0130480-mRNA-1:exon:20049;Parent=Msa0130480-mRNA-1
chr1_3 exon 60787016 60787151 60787016 ID=Msa0130480-mRNA-1:exon:20048;Parent=Msa0130480-mRNA-1
chr1_3 exon 60787526 60787588 60787526 ID=Msa0130480-mRNA-1:exon:20047;Parent=Msa0130480-mRNA-1
chr1_3 exon 60788147 60788187 60788147 ID=Msa0130480-mRNA-1:exon:20046;Parent=Msa0130480-mRNA-1
chr1_3 five_prime_UTR 60788161 60788187 60788161 ID=Msa0130480-mRNA-1:five_prime_utr;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60788147 60788160 60788147 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60787526 60787588 60787526 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60787016 60787151 60787016 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60786569 60786625 60786569 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60786159 60786245 60786159 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60784809 60784995 60784809 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60784240 60784724 60784240 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60783147 60783617 60783147 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60780644 60780726 60780644 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60780392 60780524 60780392 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60780227 60780295 60780227 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60773312 60773421 60773312 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60773071 60773206 60773071 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60770685 60770871 60770685 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60770119 60770597 60770119 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60768967 60769335 60768967 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
chr1_3 CDS 60768826 60768864 60768826 ID=Msa0130480-mRNA-1:cds;Parent=Msa0130480-mRNA-1
Gene Sequence

>Msa0130480

ATGGCTACGTCTGGAAACATCGAAAACCTGAATGTCGCTGCCACAATCGCTTCACAACTTGGTGTTGATAATCTCATACCGTCGTGGCTGGTGGACAAAAGGAGAATTGCAACAAAAATAAAGTGTGCATCTGAAGCAACCGAAAAAGTTATATGGGAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAACATGTTATCGACAACAGTGATGACATTCTGTTAAGTCTCCCAAATGCAGCCTTGCTCGGATTCTTGATAGCTGTTTTGTTTATTCATCCCCATCATAAGTTGAATTTATTGAGATTTTCACAACGTGCCAGGAAAATTCCTGAATCTATTGAGATTTCTGCACCTGTAACACAAGAGTGGCCTGGATTACCTAGAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTGAAGGAAATTTAGAACCCCATCCATTCATCGATGAATTTATCACTACTCTTAAAATGGATGATGGTATTTGTTATACTCATCCTCAGCGTTTACCAGGTGTTTCGCGAGATGGAATTGCTTCACACTTTTTCCATAGAGCAATCAAAGCCTATAATACTGGAAGCCGAAAGCGTCGAAAAATATGTGGTCAAGATTTTGGCGACGTCCGCTGGCACAAGACCGGAAGGACTAAACCTATCCTCTTGAACGGGCTTCAGAAAGGCTGTAAAAAGATTATGGTACTTTATATGACTCCAGAGAGTGGAGGAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATACCATCTTGGAACAGAAGAGGATGAAAAGGATGGAGAATATGTTATTTCTAAAGTATTTTACCAGCAGCAGCAAGCCAAATTGGGTGAAAAAGATGACCAAAATGTTCCTGAAACCTCGGAAGCAACTGTTATAAAAGTGGATCCAGTCACTCCCAATTCCGTGACGCCTGAACCTCCTCGCAATGAGAAGCAATGTTCAGATGTAGACCAAGAACAAGAATCTCATCATAGTCCTCAGATTCTACCAGATCTTTCTCGGTTAGAATGGCTACTTGAAAGTCAGGATGACTGTGAAGAGCTTCCAAAAATTGACTCGTCGACTATAGAAACTCAAACTAATGAAGGGGTCGATAACATTGACCTGTCGCAGAATTTATTGAATTCACAGCAACTTGCGGAAGGACTTTCCTTGTTCGCAGATTTCTTTCAGAGCCAGTCTCCGAAAAGGGATGGGGAAAACGGAGAGCAAATGGAACGACCTAGTCTTTCTGTATATGCTCATTTAGGAGCAGAGCAATTGAAGAAAGATATTGAAGAGTGTCAAAATCTTGAACTTAACACTACAAAGAAGAATGATATTGAAGAATGCCTTAATCTTGACGCTGACACTGAAAAAAAGAGCGATATCGAAGAGTGCCAAAATCTCAACCTTGACACTGCAAATGTAGAGCTTGACTCACAACCTTCCGACATTCGATTAAGTCAACTGAGTCTCCTTCAAGATGATCAGAATGGCAACGGAAAGGAGAAAGACATAGCAGAGGCATGGCGGAGCCCGACAAAAAAGCTCAAAGTCTCCTTCAAGATGGACTGTACTTTTTACAGCCGAAGATGCGACCAGGTTCTTTTCTTTCGAACCAAGGATCATCATCTATACACTTCTTATAGTTACTTGGCGACTGAAGTTGTCCTTGGAGCAAAAAAGGACATGACAAGTGATAATCCTAATTTCTTTTCGAATGTTAATGTCAGTCATAATCCTCTGCTGCACGTCCCGCTTAATTGGGGGATTTGGTTTACCTTCATTGCTCATTGCAACCTCCAACGCGTTCACTGTTCTTGGGCTCCCACATCATCCATGCTTCAGGCCCATTGGGCCCAAGTACCATCGTGGTTGGTGGACCAAAGTACACTTGCAACCGCTATAAGGTGTGCATCTGGAATGACCGCAAAAGTTACATCAGAAAGTAATCCTACCAGAGCGTGCCCTAATTGTCAACATGTTGTGGACAATACTCATGTAACACAAGAGTGGCCTGGACTTCCTAAAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTGAAGGAAGTTCAAAACCTCACCCTTTCATCGATGCATTTATCACTACTCTTAAAATGGATGATGGCATTTGTTATACTCATCCTCAGCATTTGCCAGGTGTTTCACAAGATGGAATTGTTTCACACTTTTTCCATAGAGCAGTGAAAGCTTATAGTACTGGAAGTCGAAAGCGGCGAAGAATATGTGGTCAAGAGTTTGCTTATGTCCGCTGGCACAAGACTGGAAAGACTAAACCTATCTTCTTGAACGGAGTTCAGAAAGGCTGCAAAAAGATTATGGTTCTTTATATGTTTCCAGAGAATGGAGGAAAAGGTGCAAAAACTAACTGGGTTATGCATCAGTATCATCTTGGAACAGAAGAGGATGAGAGGGAAGGGAACTATGTTATATCTAAAGTATTTTACCAGCAGCAGCAAGCCATATTGGGAAGAAAAGATGATCAAGATGTTCCTGAAACCGCGGAAGCAACTATTGCGAATGTTGATCTTGTCACTCCCAATTTTGCGACCACTGAACCTCCTCTTATCAGTCCCAATTTTGTAGACCAAGAACAAGAAACTCACCATATTCCTCAGATTCTACCAAATCTTCCTCAGTTAGAAGAATGGCTACTTAATAGTCAGGATGACTGTGAAGGGCTTCCGAAAATTGATCTACCGACGGTAGAAACTCAATTTCATGTAGGGATTAATAACATTGACATGCCACTGAATCTATTGGATTCACTTCCGGAAACATTTTCTTGGTTCGAATATTTATTTCAAAGCCAGTCTCCGAAAAGGCACAGGGAAAATGACGAACAAAAGAACCAGCCTAGTCTTTCGACATATGATCATCTAGGACCAGAGCAGTTAAAGAAAGACATGGAAGAGTGCCAAAATCTTGACCACACTGGCAATGTAGAGCTTGACTCAGAATCTTCCGACATTCGATTAAGTCAACTGGAATTCAGCTCACAGGAGCTATATCGACTAGGGTGGTAA
Protein sequence

>Msa0130480

MATSGNIENLNVAATIASQLGVDNLIPSWLVDKRRIATKIKCASEATEKVIWESNPTRACPNCQHVIDNSDDILLSLPNAALLGFLIAVLFIHPHHKLNLLRFSQRARKIPESIEISAPVTQEWPGLPRGVKFDPSDQEIIWHLLAKVGEGNLEPHPFIDEFITTLKMDDGICYTHPQRLPGVSRDGIASHFFHRAIKAYNTGSRKRRKICGQDFGDVRWHKTGRTKPILLNGLQKGCKKIMVLYMTPESGGKAEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQQAKLGEKDDQNVPETSEATVIKVDPVTPNSVTPEPPRNEKQCSDVDQEQESHHSPQILPDLSRLEWLLESQDDCEELPKIDSSTIETQTNEGVDNIDLSQNLLNSQQLAEGLSLFADFFQSQSPKRDGENGEQMERPSLSVYAHLGAEQLKKDIEECQNLELNTTKKNDIEECLNLDADTEKKSDIEECQNLNLDTANVELDSQPSDIRLSQLSLLQDDQNGNGKEKDIAEAWRSPTKKLKVSFKMDCTFYSRRCDQVLFFRTKDHHLYTSYSYLATEVVLGAKKDMTSDNPNFFSNVNVSHNPLLHVPLNWGIWFTFIAHCNLQRVHCSWAPTSSMLQAHWAQVPSWLVDQSTLATAIRCASGMTAKVTSESNPTRACPNCQHVVDNTHVTQEWPGLPKGVKFDPSDQEIIWHLLAKVGEGSSKPHPFIDAFITTLKMDDGICYTHPQHLPGVSQDGIVSHFFHRAVKAYSTGSRKRRRICGQEFAYVRWHKTGKTKPIFLNGVQKGCKKIMVLYMFPENGGKGAKTNWVMHQYHLGTEEDEREGNYVISKVFYQQQQAILGRKDDQDVPETAEATIANVDLVTPNFATTEPPLISPNFVDQEQETHHIPQILPNLPQLEEWLLNSQDDCEGLPKIDLPTVETQFHVGINNIDMPLNLLDSLPETFSWFEYLFQSQSPKRHRENDEQKNQPSLSTYDHLGPEQLKKDMEECQNLDHTGNVELDSESSDIRLSQLEFSSQELYRLGW*