Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131080 | sp|Q88C93|ALGC_PSEPK | 28.427 | 496 | 283 | 15 | 98 | 590 | 18 | 444 | 1.46e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131080 | G7I385 | 98.049 | 615 | 12 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008340 | Msa0131080 | 0.803979 | 2.691902e-49 | -8.615850e-47 |
| Msa0131080 | Msa0627910 | 0.802749 | 4.839504e-49 | -8.615850e-47 |
| Msa0131080 | Msa1109570 | 0.823456 | 1.372020e-53 | -8.615850e-47 |
| Msa0131080 | Msa1185540 | 0.821211 | 4.554326e-53 | -8.615850e-47 |
| Msa0131080 | Msa1349270 | 0.897310 | 1.591598e-76 | -8.615850e-47 |
| Msa0131080 | Msa1408790 | 0.800561 | 1.360245e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131080 | MtrunA17_Chr1g0199691 | 98.049 | 615 | 12 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| Msa0131080 | MtrunA17_Chr4g0043871 | 41.256 | 589 | 298 | 14 | 59 | 613 | 41 | 615 | 1.31e-130 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131080 | AT5G17530.3 | 73.573 | 613 | 157 | 4 | 6 | 615 | 3 | 613 | 0.0 | 908 |
| Msa0131080 | AT5G17530.4 | 70.801 | 637 | 157 | 5 | 6 | 615 | 3 | 637 | 0.0 | 896 |
| Msa0131080 | AT5G17530.1 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| Msa0131080 | AT5G17530.7 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| Msa0131080 | AT5G17530.2 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| Msa0131080 | AT5G17530.6 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| Msa0131080 | AT5G17530.5 | 78.558 | 541 | 114 | 2 | 75 | 615 | 3 | 541 | 0.0 | 867 |
| Msa0131080 | AT1G70820.2 | 43.726 | 526 | 250 | 11 | 86 | 581 | 66 | 575 | 4.76e-132 | 400 |
| Msa0131080 | AT1G70820.1 | 41.844 | 564 | 276 | 12 | 86 | 614 | 66 | 612 | 1.26e-131 | 399 |
Find 186 sgRNAs with CRISPR-Local
Find 747 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTCCTTTGTAAACTTTA+TGG | 0.145696 | 1_3:-61712993 | Msa0131080:three_prime_UTR |
| TTCAATCAGATAAGAGTTTC+TGG | 0.182408 | 1_3:-61713733 | Msa0131080:intron |
| CTTTAAGATCTTGATGGTTT+TGG | 0.199444 | 1_3:+61714171 | None:intergenic |
| CTGTATCTTTCAGATCTTTC+CGG | 0.217191 | 1_3:-61714066 | Msa0131080:intron |
| TGTCCTCGGGATTGGGGATA+TGG | 0.229075 | 1_3:+61715702 | None:intergenic |
| CTTGCTTCTGCAAGAGCTTC+TGG | 0.256356 | 1_3:-61714281 | Msa0131080:CDS |
| GCTGTCTTGTCCTCGGGATT+GGG | 0.263026 | 1_3:+61715695 | None:intergenic |
| TGCTGTCTTGTCCTCGGGAT+TGG | 0.272046 | 1_3:+61715694 | None:intergenic |
| AGATGACACTACTCTCAAAA+TGG | 0.272788 | 1_3:+61713253 | None:intergenic |
| GAGCTCTTAAGGAGAATAAT+TGG | 0.279187 | 1_3:-61714553 | Msa0131080:CDS |
| GGAAGCGAGTTGCGCATATA+AGG | 0.282315 | 1_3:+61719165 | None:intergenic |
| TTCAGATCTTTCCGGGAGTA+TGG | 0.288519 | 1_3:-61714058 | Msa0131080:intron |
| TTCACCAATGCTGGTGGTCT+TGG | 0.294398 | 1_3:-61716889 | Msa0131080:CDS |
| AGCGGGTTGAGGTGAATTAA+AGG | 0.298863 | 1_3:-61713390 | Msa0131080:three_prime_UTR |
| AATTTAGACCTGTAGCAATT+TGG | 0.300999 | 1_3:+61718304 | None:intergenic |
| AACTCGCTTCCCTCTCCTTC+AGG | 0.309258 | 1_3:-61719153 | Msa0131080:CDS |
| CAAAACCATCAAGATCTTAA+AGG | 0.316228 | 1_3:-61714170 | Msa0131080:CDS |
| CGGATCATAATTTGATGCTT+TGG | 0.318680 | 1_3:-61713458 | Msa0131080:exon |
| CATACCCCTTCATAGTTTAC+AGG | 0.325411 | 1_3:+61713974 | None:intergenic |
| GCGATTTCTCGAGGTCTTGC+TGG | 0.334136 | 1_3:-61717827 | Msa0131080:CDS |
| TGTTCCTTTGTAAACTTTAT+GGG | 0.335001 | 1_3:-61712992 | Msa0131080:three_prime_UTR |
| TCCCTGCATCAACAACTATA+TGG | 0.338345 | 1_3:+61716232 | None:intergenic |
| ACCCTCCTTTAAGATCTTGA+TGG | 0.345920 | 1_3:+61714165 | None:intergenic |
| CAAGATCAGCTTTGTTATCA+AGG | 0.346861 | 1_3:+61715648 | None:intergenic |
| TTGCACAAAGAATCATCTAT+TGG | 0.350293 | 1_3:-61713122 | Msa0131080:three_prime_UTR |
| GCTCCTATTGCTTCAGCAAC+AGG | 0.355574 | 1_3:+61718416 | None:intergenic |
| GTAGCAATTTGGCGGATATC+CGG | 0.369612 | 1_3:+61718315 | None:intergenic |
| CATCTGCCTTTCAACAGAAA+TGG | 0.370069 | 1_3:-61716922 | Msa0131080:CDS |
| TTTCTATTGGCCATGATTCC+CGG | 0.370362 | 1_3:-61718334 | Msa0131080:CDS |
| GCAGCTGTAAAGGAGTTTGC+AGG | 0.375282 | 1_3:-61713511 | Msa0131080:CDS |
| CTTGATAACAAAGCTGATCT+TGG | 0.375462 | 1_3:-61715647 | Msa0131080:CDS |
| CTGCAGCAAAAGCTGGTTCC+TGG | 0.381781 | 1_3:+61714213 | None:intergenic |
| TCACCAATGCTGGTGGTCTT+GGG | 0.385644 | 1_3:-61716888 | Msa0131080:CDS |
| GAATCGTTTGATCGCCTTGA+TGG | 0.385794 | 1_3:-61715489 | Msa0131080:CDS |
| ACCCATAGTGGACAACTTCT+AGG | 0.386131 | 1_3:+61717798 | None:intergenic |
| TGTATCTTTCAGATCTTTCC+GGG | 0.387466 | 1_3:-61714065 | Msa0131080:intron |
| GGCCTAGAAGTTGTCCACTA+TGG | 0.388207 | 1_3:-61717800 | Msa0131080:CDS |
| CAAAGGTGCTGGAACCTCTT+GGG | 0.392597 | 1_3:-61715852 | Msa0131080:CDS |
| TTTCATTGCTGTCTTGTCCT+CGG | 0.401263 | 1_3:+61715688 | None:intergenic |
| GAGTGGACATGGAGCTCTTA+AGG | 0.402258 | 1_3:-61714564 | Msa0131080:CDS |
| TTCCATATAGTTGTTGATGC+AGG | 0.410833 | 1_3:-61716234 | Msa0131080:CDS |
| TTATACGCGTTTGAACTTGA+AGG | 0.413958 | 1_3:-61713172 | Msa0131080:three_prime_UTR |
| TTCATTGCTGTCTTGTCCTC+GGG | 0.416993 | 1_3:+61715689 | None:intergenic |
| TCGGGATTGGGGATATGGTT+TGG | 0.417838 | 1_3:+61715707 | None:intergenic |
| CAGCATTTGAGAGTTTCTAT+TGG | 0.418225 | 1_3:-61718347 | Msa0131080:CDS |
| TATTGCTGACAGAACTCTAT+TGG | 0.418859 | 1_3:-61714614 | Msa0131080:intron |
| GAAGCGAGTTGCGCATATAA+GGG | 0.421286 | 1_3:+61719166 | None:intergenic |
| CCTCTTGGGGCAATAACTTC+TGG | 0.422876 | 1_3:-61715838 | Msa0131080:CDS |
| TCACTGGCCGTGAGTTCAAC+CGG | 0.426822 | 1_3:-61715511 | Msa0131080:CDS |
| TCTTGATGGTGTCGAGGGAG+AGG | 0.430042 | 1_3:-61718456 | Msa0131080:CDS |
| GACGGGTCTATTATGATAAC+AGG | 0.433152 | 1_3:-61717233 | Msa0131080:intron |
| GAACCTGTTGCTGAAGCAAT+AGG | 0.435275 | 1_3:-61718419 | Msa0131080:CDS |
| TGATCCGACAAATTTGTTCA+AGG | 0.437587 | 1_3:+61713474 | None:intergenic |
| CCGGGAAGTAAAATCGTTCA+AGG | 0.440436 | 1_3:+61719077 | None:intergenic |
| TCTAAGATATCTTTGATGTC+AGG | 0.441688 | 1_3:+61716862 | None:intergenic |
| AAGTCAGTCATGTCAAGATA+TGG | 0.443959 | 1_3:+61718731 | None:intergenic |
| CTTGATGGTGTCGAGGGAGA+GGG | 0.444076 | 1_3:-61718455 | Msa0131080:CDS |
| TCAAGGCGATCAAACGATTC+CGG | 0.449493 | 1_3:+61715492 | None:intergenic |
| CTCAGTTCTGCAGCAAAAGC+TGG | 0.450071 | 1_3:+61714206 | None:intergenic |
| GCAATAGGAGCTGCTTTCGC+TGG | 0.450521 | 1_3:-61718404 | Msa0131080:CDS |
| GCAAAGGTGCTGGAACCTCT+TGG | 0.455133 | 1_3:-61715853 | Msa0131080:CDS |
| AACGAAGATGCTGTGAAGCT+TGG | 0.455757 | 1_3:-61713547 | Msa0131080:CDS |
| GCCTAGAAGTTGTCCACTAT+GGG | 0.459618 | 1_3:-61717799 | Msa0131080:intron |
| ATACGTGGTGTGGCTCTTGA+TGG | 0.460624 | 1_3:-61718470 | Msa0131080:CDS |
| CATTGCAGAGAATATTTCTC+CGG | 0.466369 | 1_3:+61719058 | None:intergenic |
| AGAAACTGTGCTGAAACATT+TGG | 0.467221 | 1_3:-61714035 | Msa0131080:CDS |
| GACTCAACTGTCTATTCTGT+TGG | 0.467339 | 1_3:+61719205 | None:intergenic |
| GGAAGGTTAGAGAAGAAGTT+AGG | 0.467384 | 1_3:-61725352 | Msa0131080:five_prime_UTR |
| TTCTAAAGCTTCAAAACGGC+AGG | 0.471232 | 1_3:-61718709 | Msa0131080:intron |
| ATCATAATAGACCCGTCAAC+AGG | 0.471820 | 1_3:+61717239 | None:intergenic |
| TATCATTCTGCCTAGCATCC+TGG | 0.472339 | 1_3:-61715365 | Msa0131080:intron |
| AACGATTCCGGTTGAACTCA+CGG | 0.472416 | 1_3:+61715504 | None:intergenic |
| TTGAATCCATTTCTGTTGAA+AGG | 0.472893 | 1_3:+61716916 | None:intergenic |
| TGTTGTGCTTGCAGCTGTAA+AGG | 0.473841 | 1_3:-61713521 | Msa0131080:CDS |
| GATGACACTACTCTCAAAAT+GGG | 0.475496 | 1_3:+61713254 | None:intergenic |
| AAAGCAGTTCGCAAAGCAGC+TGG | 0.477285 | 1_3:-61716721 | Msa0131080:CDS |
| ACTCGCTTCCCTCTCCTTCA+GGG | 0.477507 | 1_3:-61719152 | Msa0131080:CDS |
| AACATAGCAGCAGCGGGTTG+AGG | 0.478024 | 1_3:-61713401 | Msa0131080:three_prime_UTR |
| AGTAGTGTCATCTGTATTTG+TGG | 0.478644 | 1_3:-61713243 | Msa0131080:three_prime_UTR |
| TGCTTTCGCTGGATGGTTGG+TGG | 0.478863 | 1_3:-61718393 | Msa0131080:CDS |
| TAGCAATTTGGCGGATATCC+GGG | 0.479076 | 1_3:+61718316 | None:intergenic |
| CTCCTTCAGGGAAGTTGACA+TGG | 0.480523 | 1_3:-61719140 | Msa0131080:CDS |
| TCTCGAGGTCTTGCTGGTGC+CGG | 0.481744 | 1_3:-61717821 | Msa0131080:CDS |
| AGCTGCTTTCGCTGGATGGT+TGG | 0.482899 | 1_3:-61718396 | Msa0131080:CDS |
| CTCTGATCCAAACCTGCAAA+AGG | 0.483664 | 1_3:-61713999 | Msa0131080:CDS |
| TCTCAGGTGGCAAACATCAC+CGG | 0.486810 | 1_3:-61715126 | Msa0131080:intron |
| TTTGAACTTGAAGGCTCAGT+TGG | 0.489481 | 1_3:-61713163 | Msa0131080:three_prime_UTR |
| GATTGATGAAGCTATTCGTT+TGG | 0.490091 | 1_3:-61715080 | Msa0131080:intron |
| AAGGCTCCTGTAAACTATGA+AGG | 0.491458 | 1_3:-61713980 | Msa0131080:CDS |
| ACATTTATTGAAAAGAAACT+TGG | 0.493165 | 1_3:-61715299 | Msa0131080:intron |
| TAGGAGCTGCTTTCGCTGGA+TGG | 0.498666 | 1_3:-61718400 | Msa0131080:CDS |
| CAGATAAGAGTTTCTGGCTA+TGG | 0.500953 | 1_3:-61713727 | Msa0131080:CDS |
| GATCTTGCACTTAAGCCATA+TGG | 0.501920 | 1_3:+61713332 | None:intergenic |
| TCTGCAAGAGCTTCTGGTGT+AGG | 0.505537 | 1_3:-61714275 | Msa0131080:CDS |
| TTTGTTATCAAGGACTGCCT+TGG | 0.505639 | 1_3:+61715658 | None:intergenic |
| TCTGTGACAATAGTTGTTCC+AGG | 0.506883 | 1_3:+61715347 | None:intergenic |
| CTGTCTTGTCCTCGGGATTG+GGG | 0.509666 | 1_3:+61715696 | None:intergenic |
| TTAGACCTGTAGCAATTTGG+CGG | 0.514455 | 1_3:+61718307 | None:intergenic |
| TCAGCCTTGAACAAATTTGT+CGG | 0.515210 | 1_3:-61713478 | Msa0131080:CDS |
| AGGCTCCTGTAAACTATGAA+GGG | 0.516647 | 1_3:-61713979 | Msa0131080:CDS |
| TGAATAATAGGCAAAGGTGC+TGG | 0.516726 | 1_3:-61715863 | Msa0131080:intron |
| TTTCATCACATCCACATGGC+AGG | 0.519002 | 1_3:-61719908 | Msa0131080:intron |
| GCACAGTTTCTCCATACTCC+CGG | 0.519881 | 1_3:+61714047 | None:intergenic |
| TCCATATAGTTGTTGATGCA+GGG | 0.521303 | 1_3:-61716233 | Msa0131080:CDS |
| TCCGCTGCTGTGGATTTCAC+TGG | 0.522447 | 1_3:-61715527 | Msa0131080:CDS |
| GCAAGAGCTTCTGGTGTAGG+TGG | 0.525871 | 1_3:-61714272 | Msa0131080:CDS |
| GACTTTCTAAAGCTTCAAAA+CGG | 0.526949 | 1_3:-61718713 | Msa0131080:CDS |
| GCAATTGAAACGAGTGGACA+TGG | 0.527794 | 1_3:-61714575 | Msa0131080:CDS |
| TGGCGGATATCCGGGAATCA+TGG | 0.527906 | 1_3:+61718324 | None:intergenic |
| ATAGTTGTTGATGCAGGGAA+TGG | 0.529461 | 1_3:-61716228 | Msa0131080:CDS |
| TTGATGGTGTCGAGGGAGAG+GGG | 0.533354 | 1_3:-61718454 | Msa0131080:CDS |
| GATATCCGCCAAATTGCTAC+AGG | 0.533406 | 1_3:-61718312 | Msa0131080:intron |
| ATAAGAGTTTCTGGCTATGG+TGG | 0.535196 | 1_3:-61713724 | Msa0131080:CDS |
| AAGAGCAATAGCTGCCATCA+AGG | 0.536219 | 1_3:+61715475 | None:intergenic |
| TGGTCTAATAGAAGGACTCC+AGG | 0.537063 | 1_3:-61714231 | Msa0131080:CDS |
| AAAGGTGCTGGAACCTCTTG+GGG | 0.537634 | 1_3:-61715851 | Msa0131080:CDS |
| TAAGAGGAAGTACAGGATCA+TGG | 0.537973 | 1_3:+61713677 | None:intergenic |
| TCAGGGAAGTTGACATGGAC+TGG | 0.538210 | 1_3:-61719135 | Msa0131080:CDS |
| TGTACTTCCTCTTAACATTG+AGG | 0.540776 | 1_3:-61713668 | Msa0131080:intron |
| CTTCCCAAGACCACCAGCAT+TGG | 0.546188 | 1_3:+61716885 | None:intergenic |
| AACCTTCCACACTAAATCAC+AGG | 0.546765 | 1_3:+61725367 | None:intergenic |
| TAAATGTCACCCACCCATAG+TGG | 0.548370 | 1_3:+61717786 | None:intergenic |
| TTCTTCTAGATCCGCTGCTG+TGG | 0.548690 | 1_3:-61715537 | Msa0131080:intron |
| GAGTTTCTGGCTATGGTGGG+TGG | 0.550099 | 1_3:-61713720 | Msa0131080:CDS |
| TGATGATGGTGCATACCTAA+TGG | 0.551834 | 1_3:-61714528 | Msa0131080:intron |
| TATATCCGAGGTTTCTGAGA+TGG | 0.553950 | 1_3:-61713292 | Msa0131080:three_prime_UTR |
| TCTTTGATACTGATGTGGAC+AGG | 0.554506 | 1_3:-61715619 | Msa0131080:intron |
| GAGAATAATTGGCTTGATGA+TGG | 0.555579 | 1_3:-61714542 | Msa0131080:CDS |
| CGCAAAGCAGCTGGAAACAT+AGG | 0.559931 | 1_3:-61716712 | Msa0131080:intron |
| TCTATTAACATAGCAGCAGC+GGG | 0.561128 | 1_3:-61713407 | Msa0131080:three_prime_UTR |
| AGCAATGAAAGCTATAACCA+AGG | 0.561872 | 1_3:-61715675 | Msa0131080:CDS |
| TTCTATTAACATAGCAGCAG+CGG | 0.563805 | 1_3:-61713408 | Msa0131080:three_prime_UTR |
| AGAGCTTCTGGTGTAGGTGG+AGG | 0.563805 | 1_3:-61714269 | Msa0131080:CDS |
| CGGAGAAATATTCTCTGCAA+TGG | 0.566331 | 1_3:-61719057 | Msa0131080:intron |
| TCAATGTTAAGAGGAAGTAC+AGG | 0.567339 | 1_3:+61713670 | None:intergenic |
| TACCTGTGATTTAGTGTGGA+AGG | 0.568393 | 1_3:-61725369 | Msa0131080:five_prime_UTR |
| AGAATAGACAGTTGAGTCGA+AGG | 0.577680 | 1_3:-61719200 | Msa0131080:CDS |
| CATGGAGTGATAGTCTAAGA+AGG | 0.578399 | 1_3:+61713695 | None:intergenic |
| AACCATCAAGATCTTAAAGG+AGG | 0.579963 | 1_3:-61714167 | Msa0131080:CDS |
| ACAGACAGTGTGACTTCTGA+TGG | 0.586550 | 1_3:-61715329 | Msa0131080:CDS |
| GTCAACTTCCCTGAAGGAGA+GGG | 0.588017 | 1_3:+61719144 | None:intergenic |
| AATTATCTTTGATACTGATG+TGG | 0.589127 | 1_3:-61715624 | Msa0131080:CDS |
| TGACAATGTGCGCAATTGCA+TGG | 0.590504 | 1_3:+61719104 | None:intergenic |
| AAGGCTCAGTTGGCAAGATG+CGG | 0.591843 | 1_3:-61713153 | Msa0131080:three_prime_UTR |
| GTCCATGTCAACTTCCCTGA+AGG | 0.592079 | 1_3:+61719138 | None:intergenic |
| GTTGCAGAGCGGAGAAACTG+AGG | 0.592365 | 1_3:+61719935 | None:intergenic |
| ATTGCAGAGAATATTTCTCC+GGG | 0.592981 | 1_3:+61719059 | None:intergenic |
| TGATGGTGTCGAGGGAGAGG+GGG | 0.593434 | 1_3:-61718453 | Msa0131080:CDS |
| GGCTCCTGTAAACTATGAAG+GGG | 0.595976 | 1_3:-61713978 | Msa0131080:intron |
| CGGGAAGTAAAATCGTTCAA+GGG | 0.597552 | 1_3:+61719078 | None:intergenic |
| GAATAGACAGTTGAGTCGAA+GGG | 0.597897 | 1_3:-61719199 | Msa0131080:CDS |
| AGTGTGCTATTGAACATAGC+TGG | 0.600868 | 1_3:+61717287 | None:intergenic |
| ATAGTGGACAACTTCTAGGC+CGG | 0.601912 | 1_3:+61717802 | None:intergenic |
| ACCATCAAGATCTTAAAGGA+GGG | 0.602735 | 1_3:-61714166 | Msa0131080:intron |
| GTTGATGCAGGGAATGGAGC+AGG | 0.602757 | 1_3:-61716222 | Msa0131080:CDS |
| GTTCCTTTGTAAACTTTATG+GGG | 0.603821 | 1_3:-61712991 | Msa0131080:three_prime_UTR |
| CTACCCCATAAAGTTTACAA+AGG | 0.604471 | 1_3:+61712988 | None:intergenic |
| TTTCAGAATGCGATTTCTCG+AGG | 0.606158 | 1_3:-61717836 | Msa0131080:intron |
| TGGAACTCGTGATATTGGTA+GGG | 0.607716 | 1_3:-61713022 | Msa0131080:intron |
| TGTCAACTTCCCTGAAGGAG+AGG | 0.608366 | 1_3:+61719143 | None:intergenic |
| TTGTTACCTGTGATTTAGTG+TGG | 0.610270 | 1_3:-61725373 | Msa0131080:five_prime_UTR |
| AAGCGAGTTGCGCATATAAG+GGG | 0.616061 | 1_3:+61719167 | None:intergenic |
| TAAGAGTTTCTGGCTATGGT+GGG | 0.619840 | 1_3:-61713723 | Msa0131080:CDS |
| ATTCTGTTGGCAGCATTGTG+AGG | 0.620771 | 1_3:+61719218 | None:intergenic |
| CCCACAGAGAAACCATTGGA+GGG | 0.622390 | 1_3:-61716258 | Msa0131080:intron |
| AAATTCCATCTCAGAAACCT+CGG | 0.622513 | 1_3:+61713287 | None:intergenic |
| CCAGAAGTTATTGCCCCAAG+AGG | 0.622873 | 1_3:+61715838 | None:intergenic |
| GTGGCTCTTGATGGTGTCGA+GGG | 0.623636 | 1_3:-61718461 | Msa0131080:CDS |
| GCCCACAGAGAAACCATTGG+AGG | 0.624310 | 1_3:-61716259 | Msa0131080:intron |
| TCTGCCCACAGAGAAACCAT+TGG | 0.625485 | 1_3:-61716262 | Msa0131080:intron |
| ACTATATGGAAACCCTCCAA+TGG | 0.625727 | 1_3:+61716246 | None:intergenic |
| TTCAAGATTAGATATATCCG+AGG | 0.625764 | 1_3:-61713304 | Msa0131080:three_prime_UTR |
| TGTGGCTCTTGATGGTGTCG+AGG | 0.626077 | 1_3:-61718462 | Msa0131080:CDS |
| AAACATCACCGGTTCAAGAG+AGG | 0.631146 | 1_3:-61715115 | Msa0131080:CDS |
| GCCAGTGAAATCCACAGCAG+CGG | 0.639450 | 1_3:+61715526 | None:intergenic |
| ATATAGTGACATACGTGGTG+TGG | 0.642176 | 1_3:-61718480 | Msa0131080:intron |
| CATCTAGCAATTGAAACGAG+TGG | 0.654527 | 1_3:-61714581 | Msa0131080:CDS |
| TATTTCTGCATTATACAGAG+AGG | 0.655986 | 1_3:-61713431 | Msa0131080:three_prime_UTR |
| CTGACAGAACTCTATTGGTG+AGG | 0.662737 | 1_3:-61714609 | Msa0131080:intron |
| CTTCAGCAACAGGTTCAGTG+AGG | 0.677929 | 1_3:+61718426 | None:intergenic |
| GTTCAATAGCACACTCACAA+AGG | 0.678351 | 1_3:-61717279 | Msa0131080:CDS |
| GATGCAGGGAATGGAGCAGG+TGG | 0.686283 | 1_3:-61716219 | Msa0131080:CDS |
| AAACCATATCCCCAATCCCG+AGG | 0.688417 | 1_3:-61715705 | Msa0131080:CDS |
| TTAATTTCATCACATCCACA+TGG | 0.723895 | 1_3:-61719912 | Msa0131080:exon |
| AATTTATATAGTGACATACG+TGG | 0.728348 | 1_3:-61718485 | Msa0131080:intron |
| GATGAAATTAAGTTGCAGAG+CGG | 0.771311 | 1_3:+61719924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTATGAATTTATTTA+AGG | - | chr1_3:61714366-61714385 | Msa0131080:intron | 10.0% |
| !!! | TTTTAATGAATCTATTATTT+TGG | + | chr1_3:61714420-61714439 | None:intergenic | 10.0% |
| !!! | TTATCTTAAATTTTAGTTTT+AGG | + | chr1_3:61714600-61714619 | None:intergenic | 10.0% |
| !!! | TGTAATATATACTTTTTATT+TGG | - | chr1_3:61716400-61716419 | Msa0131080:intron | 10.0% |
| !! | ATATTAACTTTGTATATATA+AGG | - | chr1_3:61717257-61717276 | Msa0131080:CDS | 10.0% |
| !! | TATTAACTTTGTATATATAA+GGG | - | chr1_3:61717258-61717277 | Msa0131080:CDS | 10.0% |
| !! | ATAAAACAATGATTATAATA+AGG | - | chr1_3:61717791-61717810 | Msa0131080:intron | 10.0% |
| !! | AAATTAATATAGATTTCTAA+TGG | + | chr1_3:61718101-61718120 | None:intergenic | 10.0% |
| !! | ATGAAAGATAAATAAAATAA+TGG | + | chr1_3:61720595-61720614 | None:intergenic | 10.0% |
| !! | AAAATAAAAAAGTAAAATAG+GGG | - | chr1_3:61720876-61720895 | Msa0131080:intron | 10.0% |
| !! | AAATAGTTAGAATAATAATA+AGG | + | chr1_3:61720985-61721004 | None:intergenic | 10.0% |
| !!! | TATTATTCTAACTATTTTAA+TGG | - | chr1_3:61720988-61721007 | Msa0131080:intron | 10.0% |
| !! | AATAAAAAAAATAAGCAAAT+GGG | + | chr1_3:61721749-61721768 | None:intergenic | 10.0% |
| !! | TAATAAAAAAAATAAGCAAA+TGG | + | chr1_3:61721750-61721769 | None:intergenic | 10.0% |
| !!! | AATTTTAGTAGAGTTTAAAA+GGG | - | chr1_3:61713441-61713460 | Msa0131080:three_prime_UTR | 15.0% |
| !!! | TAAATTGTTATCTTAGTTTT+TGG | + | chr1_3:61713873-61713892 | None:intergenic | 15.0% |
| !! | TAACAATTTATCATAATGTA+TGG | - | chr1_3:61713883-61713902 | Msa0131080:intron | 15.0% |
| !! | TAATTAATAGAATCAATTGT+TGG | - | chr1_3:61714343-61714362 | Msa0131080:intron | 15.0% |
| !! | TTTGAAAGAAACTATATATA+AGG | - | chr1_3:61717304-61717323 | Msa0131080:intron | 15.0% |
| !! | TTGAAAGAAACTATATATAA+GGG | - | chr1_3:61717305-61717324 | Msa0131080:intron | 15.0% |
| !!! | ATCCTTATTTTTTTTTTTGA+GGG | + | chr1_3:61717834-61717853 | None:intergenic | 15.0% |
| !!! | TATCCTTATTTTTTTTTTTG+AGG | + | chr1_3:61717835-61717854 | None:intergenic | 15.0% |
| !! | CAAGTATTTAAAAATAAAAG+AGG | + | chr1_3:61718150-61718169 | None:intergenic | 15.0% |
| !!! | CTTTTATTTTTAAATACTTG+AGG | - | chr1_3:61718150-61718169 | Msa0131080:intron | 15.0% |
| !!! | AATTTTAGTAGAGTTTAAAA+GGG | - | chr1_3:61713441-61713460 | Msa0131080:three_prime_UTR | 15.0% |
| !! | AACTTATATATTATCTACAA+TGG | - | chr1_3:61719355-61719374 | Msa0131080:intron | 15.0% |
| !!! | TTAACATTTTTGTTTTCTAA+TGG | - | chr1_3:61719533-61719552 | Msa0131080:intron | 15.0% |
| !!! | TTTATTTTTACTTTCATCTT+CGG | - | chr1_3:61720299-61720318 | Msa0131080:intron | 15.0% |
| !!! | TTTTATTTTTTTCCTGAATT+TGG | + | chr1_3:61720865-61720884 | None:intergenic | 15.0% |
| !! | AAATAAAAAAGTAAAATAGG+GGG | - | chr1_3:61720877-61720896 | Msa0131080:intron | 15.0% |
| !! | TAAATAAAGTAGATGAATAA+TGG | - | chr1_3:61721961-61721980 | Msa0131080:intron | 15.0% |
| !! | ATCAGAAAAAAAATATATAC+TGG | - | chr1_3:61722271-61722290 | Msa0131080:intron | 15.0% |
| !!! | TATAGAGAGTATAATTAATT+GGG | - | chr1_3:61722411-61722430 | Msa0131080:intron | 15.0% |
| !! | TACTAAATATTTAAATATGG+AGG | - | chr1_3:61723704-61723723 | Msa0131080:intron | 15.0% |
| !! | TAACAGAGAAATATTAATTT+GGG | + | chr1_3:61723882-61723901 | None:intergenic | 15.0% |
| !! | TTAACAGAGAAATATTAATT+TGG | + | chr1_3:61723883-61723902 | None:intergenic | 15.0% |
| !!! | TTCCTATTTTATTTTTTTCA+AGG | + | chr1_3:61725263-61725282 | None:intergenic | 15.0% |
| !! | ATTGAGAAATTGAATGAAAT+GGG | + | chr1_3:61713102-61713121 | None:intergenic | 20.0% |
| !! | AATTGAGAAATTGAATGAAA+TGG | + | chr1_3:61713103-61713122 | None:intergenic | 20.0% |
| !!! | GAATTTTAGTAGAGTTTAAA+AGG | - | chr1_3:61713440-61713459 | Msa0131080:three_prime_UTR | 20.0% |
| !!! | ATTTTGGAATTGAAAGTATT+GGG | - | chr1_3:61713469-61713488 | Msa0131080:exon | 20.0% |
| !!! | ACAACCTTCTTTTTTTTATT+TGG | - | chr1_3:61713704-61713723 | Msa0131080:CDS | 20.0% |
| !!! | CAACCTTCTTTTTTTTATTT+GGG | - | chr1_3:61713705-61713724 | Msa0131080:CDS | 20.0% |
| !! | AATCCCAAATAAAAAAAAGA+AGG | + | chr1_3:61713711-61713730 | None:intergenic | 20.0% |
| !!! | TTTGACTTTAATCTTGTTTA+TGG | + | chr1_3:61713747-61713766 | None:intergenic | 20.0% |
| !! | AATGATAAGAAGTAAAACTA+AGG | - | chr1_3:61714295-61714314 | Msa0131080:CDS | 20.0% |
| !!! | TTTAAGGAATTTGAAATTAC+TGG | - | chr1_3:61714382-61714401 | Msa0131080:intron | 20.0% |
| !!! | TTAAGGAATTTGAAATTACT+GGG | - | chr1_3:61714383-61714402 | Msa0131080:intron | 20.0% |
| !!! | ATTTTAAATTCCTTCACTTT+TGG | + | chr1_3:61714536-61714555 | None:intergenic | 20.0% |
| !!! | GAAGGAATTTAAAATAATAG+AGG | - | chr1_3:61714541-61714560 | Msa0131080:CDS | 20.0% |
| !!! | GATTTGTTTTGTTAGTTTTT+GGG | + | chr1_3:61714640-61714659 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTTGTTAGTTTT+TGG | + | chr1_3:61714641-61714660 | None:intergenic | 20.0% |
| !! | TATGAGTTAAAATTTGACAT+TGG | + | chr1_3:61714829-61714848 | None:intergenic | 20.0% |
| !! | TTCACTATTGAATAAAAAAG+TGG | + | chr1_3:61715104-61715123 | None:intergenic | 20.0% |
| !! | TAGAATTTCATCATATTTGA+GGG | + | chr1_3:61715162-61715181 | None:intergenic | 20.0% |
| !!! | AAACAAATTTGTTCTATCAT+TGG | - | chr1_3:61715737-61715756 | Msa0131080:intron | 20.0% |
| !! | CTTGATATTGTTTAAGAATT+TGG | + | chr1_3:61715850-61715869 | None:intergenic | 20.0% |
| !!! | TTAAACAATATCAAGTTTTC+CGG | - | chr1_3:61715855-61715874 | Msa0131080:CDS | 20.0% |
| !!! | TTAAATCTCAATTTTTGGTT+TGG | + | chr1_3:61715885-61715904 | None:intergenic | 20.0% |
| !!! | CAACTTTAAATCTCAATTTT+TGG | + | chr1_3:61715890-61715909 | None:intergenic | 20.0% |
| !!! | CAAAAATTGAGATTTAAAGT+TGG | - | chr1_3:61715888-61715907 | Msa0131080:intron | 20.0% |
| !! | AATGACAATAAATAAAAGTC+AGG | - | chr1_3:61716135-61716154 | Msa0131080:intron | 20.0% |
| !! | ATGACAATAAATAAAAGTCA+GGG | - | chr1_3:61716136-61716155 | Msa0131080:intron | 20.0% |
| !!! | CTTTTTATTTGGATATGAAT+TGG | - | chr1_3:61716411-61716430 | Msa0131080:intron | 20.0% |
| !!! | TTAATGTATCAGGAAAATTT+TGG | + | chr1_3:61716811-61716830 | None:intergenic | 20.0% |
| !!! | AAAATTTTCCTGATACATTA+AGG | - | chr1_3:61716810-61716829 | Msa0131080:CDS | 20.0% |
| !! | AGAACAAAGAAAAAAAAAGA+CGG | + | chr1_3:61717033-61717052 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTCTTTGTTCTT+TGG | - | chr1_3:61717034-61717053 | Msa0131080:intron | 20.0% |
| !! | GAATAATTACAAATTCATGT+TGG | - | chr1_3:61717206-61717225 | Msa0131080:intron | 20.0% |
| !! | GAAATATTAGTATTTAATGC+CGG | + | chr1_3:61717485-61717504 | None:intergenic | 20.0% |
| !! | GTTAAACATGAATGATTTAA+CGG | + | chr1_3:61717518-61717537 | None:intergenic | 20.0% |
| !! | GAAAATATCGAAAATTACAT+TGG | + | chr1_3:61717745-61717764 | None:intergenic | 20.0% |
| !! | TTCCCTCAAAAAAAAAAATA+AGG | - | chr1_3:61717829-61717848 | Msa0131080:CDS | 20.0% |
| !! | GTCTCTTATAATAAAGAAAA+AGG | + | chr1_3:61717932-61717951 | None:intergenic | 20.0% |
| !! | ATTGAGAAATTGAATGAAAT+GGG | + | chr1_3:61713102-61713121 | None:intergenic | 20.0% |
| !! | AATTGAGAAATTGAATGAAA+TGG | + | chr1_3:61713103-61713122 | None:intergenic | 20.0% |
| !!! | GAATTTTAGTAGAGTTTAAA+AGG | - | chr1_3:61713440-61713459 | Msa0131080:three_prime_UTR | 20.0% |
| !!! | ATTTTGGAATTGAAAGTATT+GGG | - | chr1_3:61713469-61713488 | Msa0131080:exon | 20.0% |
| !! | AATGTATCAGTATTTGTATA+AGG | - | chr1_3:61719452-61719471 | Msa0131080:intron | 20.0% |
| !! | ATGTATCAGTATTTGTATAA+GGG | - | chr1_3:61719453-61719472 | Msa0131080:intron | 20.0% |
| !!! | TTGATTTATTCTTTAGCTTT+TGG | - | chr1_3:61719504-61719523 | Msa0131080:intron | 20.0% |
| !!! | GTATTCTAAAATCTAAATAG+TGG | + | chr1_3:61719783-61719802 | None:intergenic | 20.0% |
| !!! | AAACCTTCAAAATATTTTGA+AGG | + | chr1_3:61720097-61720116 | None:intergenic | 20.0% |
| !!! | GATTGTGTCAAATTTTATAA+TGG | - | chr1_3:61720121-61720140 | Msa0131080:intron | 20.0% |
| !!! | ATTTTCTGATATATGAAAGA+TGG | - | chr1_3:61720178-61720197 | Msa0131080:intron | 20.0% |
| !!! | TACTTTTGATAGTATGTATA+TGG | - | chr1_3:61720429-61720448 | Msa0131080:intron | 20.0% |
| !!! | ATTCATTGATACTGATTTTT+AGG | - | chr1_3:61720689-61720708 | Msa0131080:intron | 20.0% |
| !!! | TGATTTTTAGGATATATTCT+AGG | - | chr1_3:61720701-61720720 | Msa0131080:intron | 20.0% |
| !!! | AAAGATCCGAATTTTAAAAT+AGG | - | chr1_3:61720903-61720922 | Msa0131080:intron | 20.0% |
| !!! | AAGATCCGAATTTTAAAATA+GGG | - | chr1_3:61720904-61720923 | Msa0131080:intron | 20.0% |
| !!! | TTTGAAAAATTCTGAGATAA+TGG | - | chr1_3:61721544-61721563 | Msa0131080:intron | 20.0% |
| !!! | AATATATACTGGTTTTTCTT+TGG | - | chr1_3:61722282-61722301 | Msa0131080:intron | 20.0% |
| !!! | ATATATACTGGTTTTTCTTT+GGG | - | chr1_3:61722283-61722302 | Msa0131080:intron | 20.0% |
| !!! | CTATAGAGAGTATAATTAAT+TGG | - | chr1_3:61722410-61722429 | Msa0131080:intron | 20.0% |
| !!! | AAGTTTCTTTTCAATAAATG+TGG | + | chr1_3:61723046-61723065 | None:intergenic | 20.0% |
| !! | ACATTTATTGAAAAGAAACT+TGG | - | chr1_3:61723045-61723064 | Msa0131080:intron | 20.0% |
| !! | AAGCTTATGATAAAATCTAA+GGG | + | chr1_3:61723118-61723137 | None:intergenic | 20.0% |
| !! | AAAGCTTATGATAAAATCTA+AGG | + | chr1_3:61723119-61723138 | None:intergenic | 20.0% |
| !!! | GTTAAATGTTATTTTTTCTC+AGG | - | chr1_3:61723202-61723221 | Msa0131080:intron | 20.0% |
| !!! | TGCATAAATTTGTTGTAAAT+GGG | - | chr1_3:61723316-61723335 | Msa0131080:intron | 20.0% |
| !! | AAATAGAAATGAAAACTGAA+AGG | - | chr1_3:61723580-61723599 | Msa0131080:intron | 20.0% |
| !! | AATAGAAATGAAAACTGAAA+GGG | - | chr1_3:61723581-61723600 | Msa0131080:intron | 20.0% |
| !! | TAATTGGTAAAATAAGTCTT+GGG | + | chr1_3:61724004-61724023 | None:intergenic | 20.0% |
| !! | AATTTCTAATATGCAATGAT+TGG | - | chr1_3:61724528-61724547 | Msa0131080:intron | 20.0% |
| !! | TGCCTTGAAAAAAATAAAAT+AGG | - | chr1_3:61725258-61725277 | Msa0131080:intron | 20.0% |
| ! | AAATTGAATGAAATGGGAAA+TGG | + | chr1_3:61713096-61713115 | None:intergenic | 25.0% |
| ! | GCTGCAAAATAATAACAATA+CGG | + | chr1_3:61713129-61713148 | None:intergenic | 25.0% |
| !!! | GTTTAAAAGGGTATTGATTT+TGG | - | chr1_3:61713453-61713472 | Msa0131080:exon | 25.0% |
| !!! | GATTTTGGAATTGAAAGTAT+TGG | - | chr1_3:61713468-61713487 | Msa0131080:exon | 25.0% |
| ! | ATCGATATCTCTCAAATTTA+CGG | + | chr1_3:61713604-61713623 | None:intergenic | 25.0% |
| ! | AACAAGATTAAAGTCAAAAG+TGG | - | chr1_3:61713749-61713768 | Msa0131080:intron | 25.0% |
| ! | ATCCAAAATCTTAAGACATT+AGG | - | chr1_3:61713988-61714007 | Msa0131080:CDS | 25.0% |
| !! | TACCTAATGTCTTAAGATTT+TGG | + | chr1_3:61713993-61714012 | None:intergenic | 25.0% |
| ! | TGTAAGTAAAACTTCTACAT+TGG | + | chr1_3:61714061-61714080 | None:intergenic | 25.0% |
| ! | AGCAAAATAAGAAAGATAAG+AGG | - | chr1_3:61714143-61714162 | Msa0131080:intron | 25.0% |
| ! | ATGGTAAAAAAAAAGTGAGT+TGG | - | chr1_3:61714172-61714191 | Msa0131080:CDS | 25.0% |
| ! | AAAATGAATTTGAACAAGAG+AGG | - | chr1_3:61714272-61714291 | Msa0131080:CDS | 25.0% |
| ! | ATCTATATACCTAATGCTTT+AGG | + | chr1_3:61714768-61714787 | None:intergenic | 25.0% |
| ! | AGATGTTGAGAAAAAAATGA+GGG | + | chr1_3:61714796-61714815 | None:intergenic | 25.0% |
| ! | TAGATGTTGAGAAAAAAATG+AGG | + | chr1_3:61714797-61714816 | None:intergenic | 25.0% |
| ! | ACTATTGAATAAAAAAGTGG+AGG | + | chr1_3:61715101-61715120 | None:intergenic | 25.0% |
| ! | CTAGAATTTCATCATATTTG+AGG | + | chr1_3:61715163-61715182 | None:intergenic | 25.0% |
| ! | ATAATACAGACAAACCATTT+GGG | - | chr1_3:61715296-61715315 | Msa0131080:intron | 25.0% |
| ! | GATATTGTTTAAGAATTTGG+TGG | + | chr1_3:61715847-61715866 | None:intergenic | 25.0% |
| !!! | CTTTTTCATCAGCATTTTTT+TGG | + | chr1_3:61716024-61716043 | None:intergenic | 25.0% |
| !! | GTAAAGAAAGATTAATGGAT+TGG | - | chr1_3:61716466-61716485 | Msa0131080:intron | 25.0% |
| ! | ATGTAGATAAACTACAATTC+TGG | - | chr1_3:61716491-61716510 | Msa0131080:intron | 25.0% |
| !! | ATCCTTCTTGACAATATTTT+TGG | - | chr1_3:61716643-61716662 | Msa0131080:intron | 25.0% |
| ! | TAATAGAAAAACCAAAGTCT+CGG | + | chr1_3:61716846-61716865 | None:intergenic | 25.0% |
| !!! | ACTTTGGTTTTTCTATTATC+TGG | - | chr1_3:61716848-61716867 | Msa0131080:CDS | 25.0% |
| !!! | AGAGCATATAGTTGATAATA+TGG | + | chr1_3:61716979-61716998 | None:intergenic | 25.0% |
| ! | TAAAAAATGCGATAGATAGT+TGG | - | chr1_3:61717142-61717161 | Msa0131080:intron | 25.0% |
| ! | AAATTCCATGATTTCTATAG+CGG | + | chr1_3:61717287-61717306 | None:intergenic | 25.0% |
| ! | ACAATTAATTGTATATGCAG+CGG | - | chr1_3:61717360-61717379 | Msa0131080:intron | 25.0% |
| ! | TTATGTTGTGCATATAACTT+GGG | + | chr1_3:61717407-61717426 | None:intergenic | 25.0% |
| ! | TTTATGTTGTGCATATAACT+TGG | + | chr1_3:61717408-61717427 | None:intergenic | 25.0% |
| ! | TGGATGGCTAAAATTTATTA+CGG | + | chr1_3:61717451-61717470 | None:intergenic | 25.0% |
| ! | TCAACGTGTATATAGTTATT+TGG | + | chr1_3:61717552-61717571 | None:intergenic | 25.0% |
| !!! | TGGTTTTATTAAAACTAGCT+TGG | + | chr1_3:61717716-61717735 | None:intergenic | 25.0% |
| !!! | GAAAATTACATTGGTTTTTC+TGG | + | chr1_3:61717736-61717755 | None:intergenic | 25.0% |
| ! | AATGAGTGATTGAGTTAATT+TGG | + | chr1_3:61717858-61717877 | None:intergenic | 25.0% |
| ! | TAGAAGATAATTCACTTTGT+TGG | + | chr1_3:61718029-61718048 | None:intergenic | 25.0% |
| ! | AAATTGAATGAAATGGGAAA+TGG | + | chr1_3:61713096-61713115 | None:intergenic | 25.0% |
| ! | GCTGCAAAATAATAACAATA+CGG | + | chr1_3:61713129-61713148 | None:intergenic | 25.0% |
| !!! | GTTTAAAAGGGTATTGATTT+TGG | - | chr1_3:61713453-61713472 | Msa0131080:exon | 25.0% |
| !!! | GATTTTGGAATTGAAAGTAT+TGG | - | chr1_3:61713468-61713487 | Msa0131080:exon | 25.0% |
| ! | ATCGATATCTCTCAAATTTA+CGG | + | chr1_3:61713604-61713623 | None:intergenic | 25.0% |
| ! | TTACACCTTTATTAGATTTC+TGG | + | chr1_3:61719059-61719078 | None:intergenic | 25.0% |
| !! | ATTGTGAGGTAAAAACATTT+TGG | + | chr1_3:61719115-61719134 | None:intergenic | 25.0% |
| ! | ATGATAATAAGAGTCTAGAA+CGG | + | chr1_3:61719314-61719333 | None:intergenic | 25.0% |
| ! | CACATTCATATAAAAAGCTT+GGG | + | chr1_3:61719428-61719447 | None:intergenic | 25.0% |
| ! | ACACATTCATATAAAAAGCT+TGG | + | chr1_3:61719429-61719448 | None:intergenic | 25.0% |
| ! | CAATTCTGTCAAAAATCAAA+AGG | + | chr1_3:61719487-61719506 | None:intergenic | 25.0% |
| ! | AATTTATATAGTGACATACG+TGG | - | chr1_3:61719859-61719878 | Msa0131080:intron | 25.0% |
| !!! | GAACCTTCAAAATATTTTGA+AGG | - | chr1_3:61720091-61720110 | Msa0131080:intron | 25.0% |
| !! | CAAGTATTTTGTGTTAAAAG+AGG | - | chr1_3:61720262-61720281 | Msa0131080:intron | 25.0% |
| ! | TATCTTTCATTATTTGCGTA+AGG | - | chr1_3:61720605-61720624 | Msa0131080:intron | 25.0% |
| !! | ATTAAACTCGCATAACATTT+TGG | - | chr1_3:61720746-61720765 | Msa0131080:intron | 25.0% |
| !!! | AGATCCGAATTTTAAAATAG+GGG | - | chr1_3:61720905-61720924 | Msa0131080:intron | 25.0% |
| ! | TCATCAAAAAAATGAAGGTT+TGG | + | chr1_3:61720937-61720956 | None:intergenic | 25.0% |
| !!! | ACCTTCATTTTTTTGATGAT+AGG | - | chr1_3:61720938-61720957 | Msa0131080:intron | 25.0% |
| !!! | CCTTCATTTTTTTGATGATA+GGG | - | chr1_3:61720939-61720958 | Msa0131080:intron | 25.0% |
| !!! | CTTCATTTTTTTGATGATAG+GGG | - | chr1_3:61720940-61720959 | Msa0131080:intron | 25.0% |
| !!! | TTCATTTTTTTGATGATAGG+GGG | - | chr1_3:61720941-61720960 | Msa0131080:intron | 25.0% |
| ! | ATTATGATAACAGGTATGTT+AGG | - | chr1_3:61721120-61721139 | Msa0131080:intron | 25.0% |
| ! | GAACATTTCTTTCTATGAAA+TGG | - | chr1_3:61721176-61721195 | Msa0131080:intron | 25.0% |
| ! | ACTATTACAGTTCAGTAAAA+AGG | + | chr1_3:61721202-61721221 | None:intergenic | 25.0% |
| ! | ACAAAAAGCAATAAATGCTA+AGG | + | chr1_3:61722181-61722200 | None:intergenic | 25.0% |
| ! | AGAGTATAATTAATTGGGAA+TGG | - | chr1_3:61722416-61722435 | Msa0131080:intron | 25.0% |
| ! | ACAATAAAGTTATTACCATC+AGG | + | chr1_3:61722548-61722567 | None:intergenic | 25.0% |
| ! | TGATGGTAATAACTTTATTG+TGG | - | chr1_3:61722547-61722566 | Msa0131080:intron | 25.0% |
| ! | GATGGTAATAACTTTATTGT+GGG | - | chr1_3:61722548-61722567 | Msa0131080:intron | 25.0% |
| ! | CTTTATTGTGGGAATAATTT+CGG | - | chr1_3:61722559-61722578 | Msa0131080:intron | 25.0% |
| ! | AATTATCTTTGATACTGATG+TGG | - | chr1_3:61722720-61722739 | Msa0131080:intron | 25.0% |
| !! | TCTTTTCAATAAATGTGGTA+AGG | + | chr1_3:61723041-61723060 | None:intergenic | 25.0% |
| ! | TATTGAAAAGAAACTTGGTA+TGG | - | chr1_3:61723050-61723069 | Msa0131080:intron | 25.0% |
| ! | TGGTATGGACAAATTTAAAT+TGG | - | chr1_3:61723065-61723084 | Msa0131080:intron | 25.0% |
| !!! | AAATGTTATTTTTTCTCAGG+TGG | - | chr1_3:61723205-61723224 | Msa0131080:intron | 25.0% |
| ! | TTACAACAAATTTATGCACA+AGG | + | chr1_3:61723314-61723333 | None:intergenic | 25.0% |
| !!! | GTGCATAAATTTGTTGTAAA+TGG | - | chr1_3:61723315-61723334 | Msa0131080:intron | 25.0% |
| !! | TTATCTGACTTTTACGATAA+GGG | + | chr1_3:61723342-61723361 | None:intergenic | 25.0% |
| !! | TTTATCTGACTTTTACGATA+AGG | + | chr1_3:61723343-61723362 | None:intergenic | 25.0% |
| ! | TATCGTAAAAGTCAGATAAA+TGG | - | chr1_3:61723343-61723362 | Msa0131080:intron | 25.0% |
| !!! | TAAGATACTTTGGCTTTTTT+TGG | - | chr1_3:61723401-61723420 | Msa0131080:intron | 25.0% |
| !! | TAGTGACAACAACATTTTAT+TGG | + | chr1_3:61723490-61723509 | None:intergenic | 25.0% |
| ! | TACAATAAATGCTTACCATT+AGG | + | chr1_3:61723834-61723853 | None:intergenic | 25.0% |
| ! | AAGCATTTATTGTAGACTTA+TGG | - | chr1_3:61723840-61723859 | Msa0131080:intron | 25.0% |
| ! | AGCATTTATTGTAGACTTAT+GGG | - | chr1_3:61723841-61723860 | Msa0131080:intron | 25.0% |
| ! | CTAATTGGTAAAATAAGTCT+TGG | + | chr1_3:61724005-61724024 | None:intergenic | 25.0% |
| ! | AACTCAACATTAACAACAAA+TGG | + | chr1_3:61724240-61724259 | None:intergenic | 25.0% |
| ! | TGTTCCTTTGTAAACTTTAT+GGG | - | chr1_3:61725352-61725371 | Msa0131080:five_prime_UTR | 25.0% |
| TTAATTTCATCACATCCACA+TGG | - | chr1_3:61713054-61713073 | Msa0131080:intron | 30.0% | |
| TATTAAGGGCTTGTATGAAT+TGG | + | chr1_3:61713399-61713418 | None:intergenic | 30.0% | |
| AATTTGAGAGATATCGATGA+TGG | - | chr1_3:61713606-61713625 | Msa0131080:intron | 30.0% | |
| GGATGTATTTGAAAGAACAT+AGG | - | chr1_3:61713770-61713789 | Msa0131080:intron | 30.0% | |
| ! | TAAGATTTTGGATGAAGATG+TGG | + | chr1_3:61713981-61714000 | None:intergenic | 30.0% |
| ACAAAGAATCTCACACTTAA+GGG | + | chr1_3:61714104-61714123 | None:intergenic | 30.0% | |
| GATTCTTTGTGTCTATGATA+TGG | - | chr1_3:61714114-61714133 | Msa0131080:intron | 30.0% | |
| ! | GTAAAAAAAAAGTGAGTTGG+TGG | - | chr1_3:61714175-61714194 | Msa0131080:CDS | 30.0% |
| CTTTGTTCCTTTCTTTAATG+TGG | - | chr1_3:61714217-61714236 | Msa0131080:CDS | 30.0% | |
| TCTATCTCCACATTAAAGAA+AGG | + | chr1_3:61714227-61714246 | None:intergenic | 30.0% | |
| TCTTTGGTATGATTTGACAA+TGG | + | chr1_3:61714513-61714532 | None:intergenic | 30.0% | |
| !! | TCAATTTTTCGATGAAGATC+TGG | + | chr1_3:61715038-61715057 | None:intergenic | 30.0% |
| !! | AATGCATCGTTATTGTTTTG+AGG | - | chr1_3:61715228-61715247 | Msa0131080:intron | 30.0% |
| ATAAGACATTATATCGTGCA+TGG | + | chr1_3:61715266-61715285 | None:intergenic | 30.0% | |
| CACGATATAATGTCTTATGA+TGG | - | chr1_3:61715268-61715287 | Msa0131080:intron | 30.0% | |
| GATAATACAGACAAACCATT+TGG | - | chr1_3:61715295-61715314 | Msa0131080:intron | 30.0% | |
| TAATACAGACAAACCATTTG+GGG | - | chr1_3:61715297-61715316 | Msa0131080:intron | 30.0% | |
| ! | TTTTTGCCAGTGATAAGAAA+AGG | - | chr1_3:61715355-61715374 | Msa0131080:intron | 30.0% |
| AGATAAGAAAGTTTGTCGAT+TGG | - | chr1_3:61715500-61715519 | Msa0131080:CDS | 30.0% | |
| ! | TCTGGTTGATGTTGTATATT+CGG | - | chr1_3:61715630-61715649 | Msa0131080:CDS | 30.0% |
| GGAATATACCAGTTCTTATT+TGG | - | chr1_3:61715776-61715795 | Msa0131080:intron | 30.0% | |
| TTTGCAAACCAAATAAGAAC+TGG | + | chr1_3:61715787-61715806 | None:intergenic | 30.0% | |
| !!! | CAATTTTTGGTTTGGAATAC+CGG | + | chr1_3:61715877-61715896 | None:intergenic | 30.0% |
| AATCTTGGGAAGAACTTTAT+CGG | - | chr1_3:61715984-61716003 | Msa0131080:intron | 30.0% | |
| TCCAATACTAAACTTAGTTC+CGG | - | chr1_3:61716051-61716070 | Msa0131080:intron | 30.0% | |
| TGTCTCGTAGTAAATTTGAA+AGG | + | chr1_3:61716091-61716110 | None:intergenic | 30.0% | |
| ATTGCAAAACACATAACCAA+CGG | + | chr1_3:61716118-61716137 | None:intergenic | 30.0% | |
| TGAAATCTATCTTTCCAAAC+CGG | - | chr1_3:61716177-61716196 | Msa0131080:intron | 30.0% | |
| AAACATTCCGAAAAACATCA+CGG | + | chr1_3:61716321-61716340 | None:intergenic | 30.0% | |
| TCTTTACGCAACTATTAGAA+TGG | + | chr1_3:61716453-61716472 | None:intergenic | 30.0% | |
| GTTGCGTAAAGAAAGATTAA+TGG | - | chr1_3:61716461-61716480 | Msa0131080:intron | 30.0% | |
| TGCACAACAATAAATGTCAT+TGG | + | chr1_3:61716560-61716579 | None:intergenic | 30.0% | |
| TTTATTGTTGTGCAAAGAAC+AGG | - | chr1_3:61716566-61716585 | Msa0131080:intron | 30.0% | |
| CCTATAACAAATTGATCACT+CGG | + | chr1_3:61716592-61716611 | None:intergenic | 30.0% | |
| !! | CGAGTGATCAATTTGTTATA+GGG | - | chr1_3:61716590-61716609 | Msa0131080:intron | 30.0% |
| GACCAAAAATATTGTCAAGA+AGG | + | chr1_3:61716648-61716667 | None:intergenic | 30.0% | |
| TGACGTTAATGGAATTTCTA+TGG | - | chr1_3:61716733-61716752 | Msa0131080:CDS | 30.0% | |
| TATCATTGACCAATTGCAAT+AGG | - | chr1_3:61716764-61716783 | Msa0131080:CDS | 30.0% | |
| GATAAACACCTTAATGTATC+AGG | + | chr1_3:61716821-61716840 | None:intergenic | 30.0% | |
| CAACAGAAAATGCTTGAAAA+AGG | + | chr1_3:61717101-61717120 | None:intergenic | 30.0% | |
| !! | AAACTATATATAAGGGCATC+TGG | - | chr1_3:61717312-61717331 | Msa0131080:intron | 30.0% |
| TATGTTGTGCATATAACTTG+GGG | + | chr1_3:61717406-61717425 | None:intergenic | 30.0% | |
| ! | TAATGCCGGAATATTTTACA+TGG | + | chr1_3:61717471-61717490 | None:intergenic | 30.0% |
| GTTTATAACTTGAGTGGTTA+AGG | + | chr1_3:61717897-61717916 | None:intergenic | 30.0% | |
| ! | TTGGTAGTTTATAACTTGAG+TGG | + | chr1_3:61717903-61717922 | None:intergenic | 30.0% |
| ATAAAGAAAAAGGTAGTCGT+TGG | + | chr1_3:61717922-61717941 | None:intergenic | 30.0% | |
| TTAATTTCATCACATCCACA+TGG | - | chr1_3:61713054-61713073 | Msa0131080:intron | 30.0% | |
| TATTAAGGGCTTGTATGAAT+TGG | + | chr1_3:61713399-61713418 | None:intergenic | 30.0% | |
| AATTTGAGAGATATCGATGA+TGG | - | chr1_3:61713606-61713625 | Msa0131080:intron | 30.0% | |
| TGAGACCAGAAATCTAATAA+AGG | - | chr1_3:61719051-61719070 | Msa0131080:intron | 30.0% | |
| !! | TTTTTATTTGCAGCAACATC+AGG | - | chr1_3:61719080-61719099 | Msa0131080:CDS | 30.0% |
| !! | TTTTATTTGCAGCAACATCA+GGG | - | chr1_3:61719081-61719100 | Msa0131080:CDS | 30.0% |
| CTAGACTCTTATTATCATAC+AGG | - | chr1_3:61719316-61719335 | Msa0131080:intron | 30.0% | |
| TTCATATAAAAAGCTTGGGA+AGG | + | chr1_3:61719424-61719443 | None:intergenic | 30.0% | |
| !! | GACTTTCTAAAGCTTCAAAA+CGG | - | chr1_3:61719631-61719650 | Msa0131080:intron | 30.0% |
| !!! | ATGGTTTTAAATTGCAACTG+CGG | - | chr1_3:61719664-61719683 | Msa0131080:intron | 30.0% |
| AATTTAGACCTGTAGCAATT+TGG | + | chr1_3:61720043-61720062 | None:intergenic | 30.0% | |
| AAAACATGAGCAATGATATG+AGG | + | chr1_3:61720069-61720088 | None:intergenic | 30.0% | |
| !!! | AATGGTTTTGAAGAGAATTC+TGG | - | chr1_3:61720139-61720158 | Msa0131080:intron | 30.0% |
| TAACACAAAATACTTGCAAG+TGG | + | chr1_3:61720258-61720277 | None:intergenic | 30.0% | |
| TAAGTTGTTGTGAACTCTAA+TGG | - | chr1_3:61720638-61720657 | Msa0131080:intron | 30.0% | |
| TCAATGAATAAGAATCTGCT+TGG | + | chr1_3:61720678-61720697 | None:intergenic | 30.0% | |
| !!! | TTGTGTCATTTTTGTCATTG+TGG | + | chr1_3:61720827-61720846 | None:intergenic | 30.0% |
| AATGACACAAAAATCAGATG+AGG | - | chr1_3:61720837-61720856 | Msa0131080:intron | 30.0% | |
| ATGACACAAAAATCAGATGA+GGG | - | chr1_3:61720838-61720857 | Msa0131080:intron | 30.0% | |
| !!! | GATCCGAATTTTAAAATAGG+GGG | - | chr1_3:61720906-61720925 | Msa0131080:intron | 30.0% |
| !!! | ATCCGAATTTTAAAATAGGG+GGG | - | chr1_3:61720907-61720926 | Msa0131080:intron | 30.0% |
| CCCTATCATCAAAAAAATGA+AGG | + | chr1_3:61720942-61720961 | None:intergenic | 30.0% | |
| ! | ATAAGGCTTAAATGCACTTT+TGG | + | chr1_3:61720968-61720987 | None:intergenic | 30.0% |
| AACAACGTGCAATATGAAAA+TGG | + | chr1_3:61721283-61721302 | None:intergenic | 30.0% | |
| !! | TTTTCGTTTGTTAATGTCCA+CGG | - | chr1_3:61721318-61721337 | Msa0131080:intron | 30.0% |
| TTGAATCCATTTCTGTTGAA+AGG | + | chr1_3:61721431-61721450 | None:intergenic | 30.0% | |
| ! | TTCAAATTTTTCACCAATGC+TGG | - | chr1_3:61721446-61721465 | Msa0131080:intron | 30.0% |
| ! | TCTAAGATATCTTTGATGTC+AGG | + | chr1_3:61721485-61721504 | None:intergenic | 30.0% |
| ACGACTTTGCTGAAATAAAA+TGG | - | chr1_3:61721656-61721675 | Msa0131080:intron | 30.0% | |
| GCTGAAATAAAATGGTAACT+TGG | - | chr1_3:61721664-61721683 | Msa0131080:intron | 30.0% | |
| GAAATAAAATGGTAACTTGG+TGG | - | chr1_3:61721667-61721686 | Msa0131080:intron | 30.0% | |
| AATTCCTCCATAAAATGCAA+TGG | - | chr1_3:61721823-61721842 | Msa0131080:intron | 30.0% | |
| AATCCTTCACAAATTAGCTA+TGG | - | chr1_3:61721852-61721871 | Msa0131080:intron | 30.0% | |
| ! | GTGTTGTCAAATATTGGTTA+TGG | + | chr1_3:61721909-61721928 | None:intergenic | 30.0% |
| TAACCAATATTTGACAACAC+TGG | - | chr1_3:61721909-61721928 | Msa0131080:intron | 30.0% | |
| AAACCAGTGTTGTCAAATAT+TGG | + | chr1_3:61721915-61721934 | None:intergenic | 30.0% | |
| ! | AATATTTGACAACACTGGTT+TGG | - | chr1_3:61721914-61721933 | Msa0131080:intron | 30.0% |
| !! | ATGACTCAGTTTGTTATTGT+AGG | - | chr1_3:61722003-61722022 | Msa0131080:intron | 30.0% |
| AGCGTGCATATTCTAATATT+TGG | + | chr1_3:61722363-61722382 | None:intergenic | 30.0% | |
| !!! | TGATATTCACTGTTGCTTTT+TGG | - | chr1_3:61722458-61722477 | Msa0131080:intron | 30.0% |
| !!! | GTTGCTTTTTGGTGAATAAT+AGG | - | chr1_3:61722469-61722488 | Msa0131080:intron | 30.0% |
| ! | TTTTGGTGAATAATAGGCAA+AGG | - | chr1_3:61722475-61722494 | Msa0131080:intron | 30.0% |
| ! | AACTTCTGGTAGTCAATTTT+TGG | - | chr1_3:61722520-61722539 | Msa0131080:intron | 30.0% |
| GAAGTATACAGAGAATTGTA+AGG | + | chr1_3:61722942-61722961 | None:intergenic | 30.0% | |
| CTTATGATAAAATCTAAGGG+AGG | + | chr1_3:61723115-61723134 | None:intergenic | 30.0% | |
| ! | GCTTTTAATCTCTATCTTCA+AGG | - | chr1_3:61723134-61723153 | Msa0131080:intron | 30.0% |
| ! | CTGCATTCTAACATTTTTAC+AGG | + | chr1_3:61723516-61723535 | None:intergenic | 30.0% |
| GCATTTATTGTAGACTTATG+GGG | - | chr1_3:61723842-61723861 | Msa0131080:intron | 30.0% | |
| !!! | GTTTTAACTGGTCTAATAGA+AGG | - | chr1_3:61724105-61724124 | Msa0131080:intron | 30.0% |
| !!! | CTTTAAGATCTTGATGGTTT+TGG | + | chr1_3:61724176-61724195 | None:intergenic | 30.0% |
| CAAAACCATCAAGATCTTAA+AGG | - | chr1_3:61724174-61724193 | Msa0131080:intron | 30.0% | |
| TTCAATCAGATAAGAGTTTC+TGG | - | chr1_3:61724611-61724630 | Msa0131080:intron | 30.0% | |
| ! | CATTTTACCTCAATGTTAAG+AGG | + | chr1_3:61724686-61724705 | None:intergenic | 30.0% |
| ! | ATGAACATACTTGTTACTGT+AGG | - | chr1_3:61724766-61724785 | Msa0131080:intron | 30.0% |
| ! | TATTTCTGCATTATACAGAG+AGG | - | chr1_3:61724913-61724932 | Msa0131080:intron | 30.0% |
| ATACAAAAACTACAGCCATA+TGG | - | chr1_3:61724997-61725016 | Msa0131080:intron | 30.0% | |
| TTCAAGATTAGATATATCCG+AGG | - | chr1_3:61725040-61725059 | Msa0131080:intron | 30.0% | |
| !!! | AACGTTGATGTTTTTTGACT+TGG | - | chr1_3:61725135-61725154 | Msa0131080:intron | 30.0% |
| TTGCACAAAGAATCATCTAT+TGG | - | chr1_3:61725222-61725241 | Msa0131080:intron | 30.0% | |
| GTGTTCCTTTGTAAACTTTA+TGG | - | chr1_3:61725351-61725370 | Msa0131080:five_prime_UTR | 30.0% | |
| GTTCCTTTGTAAACTTTATG+GGG | - | chr1_3:61725353-61725372 | Msa0131080:five_prime_UTR | 30.0% | |
| TTGTTACCTGTGATTTAGTG+TGG | - | chr1_3:61712971-61712990 | Msa0131080:three_prime_UTR | 35.0% | |
| ! | GATGAAATTAAGTTGCAGAG+CGG | + | chr1_3:61713045-61713064 | None:intergenic | 35.0% |
| !! | TGGAATTGAAAGTATTGGGT+TGG | - | chr1_3:61713473-61713492 | Msa0131080:CDS | 35.0% |
| CTCAAATTTACGGACATCTA+GGG | + | chr1_3:61713594-61713613 | None:intergenic | 35.0% | |
| TCTCAAATTTACGGACATCT+AGG | + | chr1_3:61713595-61713614 | None:intergenic | 35.0% | |
| ! | TTTATTTGGGATTGAGACCA+AGG | - | chr1_3:61713718-61713737 | Msa0131080:CDS | 35.0% |
| ! | AATCTTGTTTATGGTAGCCT+TGG | + | chr1_3:61713738-61713757 | None:intergenic | 35.0% |
| GTGATGATCCAAGTCATTAT+AGG | + | chr1_3:61713922-61713941 | None:intergenic | 35.0% | |
| ! | ATGACTTGGATCATCACATT+TGG | - | chr1_3:61713925-61713944 | Msa0131080:intron | 35.0% |
| ! | TGGTGTCAATCTCATTTATG+GGG | + | chr1_3:61713961-61713980 | None:intergenic | 35.0% |
| ! | GTGGTGTCAATCTCATTTAT+GGG | + | chr1_3:61713962-61713981 | None:intergenic | 35.0% |
| ! | TGTGGTGTCAATCTCATTTA+TGG | + | chr1_3:61713963-61713982 | None:intergenic | 35.0% |
| CACAAAGAATCTCACACTTA+AGG | + | chr1_3:61714105-61714124 | None:intergenic | 35.0% | |
| GAAAGATAAGAGGAACAACA+TGG | - | chr1_3:61714153-61714172 | Msa0131080:intron | 35.0% | |
| ATACCAAAGACCAAAAGTGA+AGG | - | chr1_3:61714523-61714542 | Msa0131080:intron | 35.0% | |
| !! | ATTCCTTCACTTTTGGTCTT+TGG | + | chr1_3:61714529-61714548 | None:intergenic | 35.0% |
| TATAATGTTGCGACTTCCAT+TGG | - | chr1_3:61714662-61714681 | Msa0131080:intron | 35.0% | |
| ATGATGATACAACCCAATGT+AGG | + | chr1_3:61714690-61714709 | None:intergenic | 35.0% | |
| !! | ACCTAATGCTTTAGGACTTT+GGG | + | chr1_3:61714760-61714779 | None:intergenic | 35.0% |
| !! | TACCTAATGCTTTAGGACTT+TGG | + | chr1_3:61714761-61714780 | None:intergenic | 35.0% |
| ! | AGACACGGAGATTTTCTTAA+TGG | + | chr1_3:61714872-61714891 | None:intergenic | 35.0% |
| ACATTATATCGTGCATGGTT+TGG | + | chr1_3:61715261-61715280 | None:intergenic | 35.0% | |
| AATACAGACAAACCATTTGG+GGG | - | chr1_3:61715298-61715317 | Msa0131080:intron | 35.0% | |
| CTTTCAATTGGAGATGGAAT+AGG | - | chr1_3:61715526-61715545 | Msa0131080:CDS | 35.0% | |
| GTTAATTTATCCACTCTCGT+TGG | + | chr1_3:61715557-61715576 | None:intergenic | 35.0% | |
| ATCAGCAACTCATCAAGAAT+GGG | + | chr1_3:61715583-61715602 | None:intergenic | 35.0% | |
| TATCAGCAACTCATCAAGAA+TGG | + | chr1_3:61715584-61715603 | None:intergenic | 35.0% | |
| ! | GTATATTCCTTTTTGTCTCC+TGG | + | chr1_3:61715765-61715784 | None:intergenic | 35.0% |
| AGGTAGATTGTAGACAATCT+TGG | - | chr1_3:61715969-61715988 | Msa0131080:intron | 35.0% | |
| GGTAGATTGTAGACAATCTT+GGG | - | chr1_3:61715970-61715989 | Msa0131080:intron | 35.0% | |
| CCAATACTAAACTTAGTTCC+GGG | - | chr1_3:61716052-61716071 | Msa0131080:intron | 35.0% | |
| TTGCAAAACACATAACCAAC+GGG | + | chr1_3:61716117-61716136 | None:intergenic | 35.0% | |
| AAATGTCCATGAGTGAAAAC+CGG | + | chr1_3:61716199-61716218 | None:intergenic | 35.0% | |
| ! | AAGCATTTTCAACCCCTTTT+TGG | + | chr1_3:61716248-61716267 | None:intergenic | 35.0% |
| ! | TTGTGTACCGTGATGTTTTT+CGG | - | chr1_3:61716311-61716330 | Msa0131080:intron | 35.0% |
| !! | CCGAGTGATCAATTTGTTAT+AGG | - | chr1_3:61716589-61716608 | Msa0131080:intron | 35.0% |
| TGATATCACCTCACTTAAAG+CGG | + | chr1_3:61716696-61716715 | None:intergenic | 35.0% | |
| ATATGGTCACTGAAAGAGTA+CGG | + | chr1_3:61716962-61716981 | None:intergenic | 35.0% | |
| TTAATTGTATATGCAGCGGT+AGG | - | chr1_3:61717364-61717383 | Msa0131080:intron | 35.0% | |
| GCCATCCATGTAAAATATTC+CGG | - | chr1_3:61717463-61717482 | Msa0131080:intron | 35.0% | |
| TTGTTACCTGTGATTTAGTG+TGG | - | chr1_3:61712971-61712990 | Msa0131080:three_prime_UTR | 35.0% | |
| ! | GATGAAATTAAGTTGCAGAG+CGG | + | chr1_3:61713045-61713064 | None:intergenic | 35.0% |
| !! | TGGAATTGAAAGTATTGGGT+TGG | - | chr1_3:61713473-61713492 | Msa0131080:CDS | 35.0% |
| CTCAAATTTACGGACATCTA+GGG | + | chr1_3:61713594-61713613 | None:intergenic | 35.0% | |
| TCTCAAATTTACGGACATCT+AGG | + | chr1_3:61713595-61713614 | None:intergenic | 35.0% | |
| ATTGCAGAGAATATTTCTCC+GGG | + | chr1_3:61719288-61719307 | None:intergenic | 35.0% | |
| CATTGCAGAGAATATTTCTC+CGG | + | chr1_3:61719289-61719308 | None:intergenic | 35.0% | |
| TATAAAAAGCTTGGGAAGGA+AGG | + | chr1_3:61719420-61719439 | None:intergenic | 35.0% | |
| ! | GGATGTTTGTTTCTTCCATT+TGG | - | chr1_3:61719554-61719573 | Msa0131080:intron | 35.0% |
| AAGTCAGTCATGTCAAGATA+TGG | + | chr1_3:61719616-61719635 | None:intergenic | 35.0% | |
| CAGCATTTGAGAGTTTCTAT+TGG | - | chr1_3:61719997-61720016 | Msa0131080:intron | 35.0% | |
| !! | GAGAAATCGCATTCTGAAAT+TGG | + | chr1_3:61720507-61720526 | None:intergenic | 35.0% |
| TTCATTATTTGCGTAAGGAC+TGG | - | chr1_3:61720610-61720629 | Msa0131080:intron | 35.0% | |
| GATATATTCTAGGCTAGCAT+AGG | - | chr1_3:61720711-61720730 | Msa0131080:intron | 35.0% | |
| TGGCATATTCATTTATGACG+TGG | + | chr1_3:61720807-61720826 | None:intergenic | 35.0% | |
| !!! | TCCGAATTTTAAAATAGGGG+GGG | - | chr1_3:61720908-61720927 | Msa0131080:intron | 35.0% |
| ! | GCATTTTTATGTCCTGTTGA+CGG | - | chr1_3:61721093-61721112 | Msa0131080:intron | 35.0% |
| ! | CATTTTTATGTCCTGTTGAC+GGG | - | chr1_3:61721094-61721113 | Msa0131080:intron | 35.0% |
| TGAACTGTAATAGTGAGTTG+TGG | - | chr1_3:61721208-61721227 | Msa0131080:intron | 35.0% | |
| TGGCTAAGCTTAATTGTGAA+TGG | + | chr1_3:61721263-61721282 | None:intergenic | 35.0% | |
| ! | TTTCGTTTGTTAATGTCCAC+GGG | - | chr1_3:61721319-61721338 | Msa0131080:intron | 35.0% |
| ! | AAATTTTTCACCAATGCTGG+TGG | - | chr1_3:61721449-61721468 | Msa0131080:intron | 35.0% |
| !! | TGGTTTTACAGCTTCTGATA+TGG | - | chr1_3:61721687-61721706 | Msa0131080:intron | 35.0% |
| ! | TTTTACAGCTTCTGATATGG+CGG | - | chr1_3:61721690-61721709 | Msa0131080:intron | 35.0% |
| !! | ATTTGGAGCCGTTTTATTGA+TGG | - | chr1_3:61721782-61721801 | Msa0131080:intron | 35.0% |
| ATGGTCCACCATCAATAAAA+CGG | + | chr1_3:61721793-61721812 | None:intergenic | 35.0% | |
| ! | TGGTTTGGAGATACAAATAC+TGG | - | chr1_3:61721929-61721948 | Msa0131080:intron | 35.0% |
| GGTTTGGAGATACAAATACT+GGG | - | chr1_3:61721930-61721949 | Msa0131080:intron | 35.0% | |
| TTCCATATAGTTGTTGATGC+AGG | - | chr1_3:61722110-61722129 | Msa0131080:intron | 35.0% | |
| TCCATATAGTTGTTGATGCA+GGG | - | chr1_3:61722111-61722130 | Msa0131080:intron | 35.0% | |
| ! | GCTCTTTTATGCAAAGCATA+TGG | - | chr1_3:61722318-61722337 | Msa0131080:intron | 35.0% |
| GCATATGGTTTACAAATCTG+CGG | - | chr1_3:61722333-61722352 | Msa0131080:intron | 35.0% | |
| TAACAATGGCTTCTGTATAC+AGG | - | chr1_3:61722607-61722626 | Msa0131080:intron | 35.0% | |
| AGCAATGAAAGCTATAACCA+AGG | - | chr1_3:61722669-61722688 | Msa0131080:intron | 35.0% | |
| !! | CAAGATCAGCTTTGTTATCA+AGG | + | chr1_3:61722699-61722718 | None:intergenic | 35.0% |
| ! | CTTGATAACAAAGCTGATCT+TGG | - | chr1_3:61722697-61722716 | Msa0131080:intron | 35.0% |
| !!! | TTTTATTGCTAGCTTTCCTC+TGG | - | chr1_3:61722905-61722924 | Msa0131080:intron | 35.0% |
| TAAGGTTGAAAAACTACCAG+AGG | + | chr1_3:61722924-61722943 | None:intergenic | 35.0% | |
| GATTGATGAAGCTATTCGTT+TGG | - | chr1_3:61723264-61723283 | Msa0131080:intron | 35.0% | |
| ATAGAAGCTAAAGACGTCTT+TGG | + | chr1_3:61723617-61723636 | None:intergenic | 35.0% | |
| TATTGCTGACAGAACTCTAT+TGG | - | chr1_3:61723730-61723749 | Msa0131080:intron | 35.0% | |
| GAGCTCTTAAGGAGAATAAT+TGG | - | chr1_3:61723791-61723810 | Msa0131080:intron | 35.0% | |
| !! | GAGAATAATTGGCTTGATGA+TGG | - | chr1_3:61723802-61723821 | Msa0131080:intron | 35.0% |
| CAGCTTAAACTTATAGCTGA+GGG | + | chr1_3:61723952-61723971 | None:intergenic | 35.0% | |
| ACAGCTTAAACTTATAGCTG+AGG | + | chr1_3:61723953-61723972 | None:intergenic | 35.0% | |
| !! | CAATGTGTGGTAGTTCTAAT+TGG | + | chr1_3:61724020-61724039 | None:intergenic | 35.0% |
| AACCATCAAGATCTTAAAGG+AGG | - | chr1_3:61724177-61724196 | Msa0131080:intron | 35.0% | |
| ACCATCAAGATCTTAAAGGA+GGG | - | chr1_3:61724178-61724197 | Msa0131080:intron | 35.0% | |
| AACAAATGGATGCATGCTAA+CGG | + | chr1_3:61724226-61724245 | None:intergenic | 35.0% | |
| CTGTATCTTTCAGATCTTTC+CGG | - | chr1_3:61724278-61724297 | Msa0131080:intron | 35.0% | |
| TGTATCTTTCAGATCTTTCC+GGG | - | chr1_3:61724279-61724298 | Msa0131080:intron | 35.0% | |
| AGAAACTGTGCTGAAACATT+TGG | - | chr1_3:61724309-61724328 | Msa0131080:intron | 35.0% | |
| ! | TCAATGTTAAGAGGAAGTAC+AGG | + | chr1_3:61724677-61724696 | None:intergenic | 35.0% |
| TGTACTTCCTCTTAACATTG+AGG | - | chr1_3:61724676-61724695 | Msa0131080:intron | 35.0% | |
| TCAGCCTTGAACAAATTTGT+CGG | - | chr1_3:61724866-61724885 | Msa0131080:intron | 35.0% | |
| ! | TGATCCGACAAATTTGTTCA+AGG | + | chr1_3:61724873-61724892 | None:intergenic | 35.0% |
| CGGATCATAATTTGATGCTT+TGG | - | chr1_3:61724886-61724905 | Msa0131080:intron | 35.0% | |
| TTCTATTAACATAGCAGCAG+CGG | - | chr1_3:61724936-61724955 | Msa0131080:intron | 35.0% | |
| AAATTCCATCTCAGAAACCT+CGG | + | chr1_3:61725060-61725079 | None:intergenic | 35.0% | |
| GATGACACTACTCTCAAAAT+GGG | + | chr1_3:61725093-61725112 | None:intergenic | 35.0% | |
| AGATGACACTACTCTCAAAA+TGG | + | chr1_3:61725094-61725113 | None:intergenic | 35.0% | |
| AGTAGTGTCATCTGTATTTG+TGG | - | chr1_3:61725101-61725120 | Msa0131080:intron | 35.0% | |
| TTATACGCGTTTGAACTTGA+AGG | - | chr1_3:61725172-61725191 | Msa0131080:intron | 35.0% | |
| !!! | TGATTTTGGGTTGAACTTCA+CGG | + | chr1_3:61725301-61725320 | None:intergenic | 35.0% |
| GAAGTTCAACCCAAAATCAA+TGG | - | chr1_3:61725302-61725321 | Msa0131080:intron | 35.0% | |
| !!! | TCACGAGTTCCATTGATTTT+GGG | + | chr1_3:61725314-61725333 | None:intergenic | 35.0% |
| !!! | ATCACGAGTTCCATTGATTT+TGG | + | chr1_3:61725315-61725334 | None:intergenic | 35.0% |
| ATCAATGGAACTCGTGATAT+TGG | - | chr1_3:61725317-61725336 | Msa0131080:intron | 35.0% | |
| CTACCCCATAAAGTTTACAA+AGG | + | chr1_3:61725359-61725378 | None:intergenic | 35.0% | |
| TACCTGTGATTTAGTGTGGA+AGG | - | chr1_3:61712975-61712994 | Msa0131080:three_prime_UTR | 40.0% | |
| AACCTTCCACACTAAATCAC+AGG | + | chr1_3:61712980-61712999 | None:intergenic | 40.0% | |
| GGAAGGTTAGAGAAGAAGTT+AGG | - | chr1_3:61712992-61713011 | Msa0131080:three_prime_UTR | 40.0% | |
| GTAAAAATTGACCTGCCATG+TGG | + | chr1_3:61713072-61713091 | None:intergenic | 40.0% | |
| !! | AGCTGTTTTCATAGCTACTG+TGG | - | chr1_3:61713253-61713272 | Msa0131080:three_prime_UTR | 40.0% |
| AGAATCTCACACTTAAGGGA+GGG | + | chr1_3:61714100-61714119 | None:intergenic | 40.0% | |
| AAGAATCTCACACTTAAGGG+AGG | + | chr1_3:61714101-61714120 | None:intergenic | 40.0% | |
| !! | AGTTGGTGGCTATTTCATAG+AGG | - | chr1_3:61714189-61714208 | Msa0131080:CDS | 40.0% |
| !! | GTTGGTGGCTATTTCATAGA+GGG | - | chr1_3:61714190-61714209 | Msa0131080:CDS | 40.0% |
| ! | TTGGTGGCTATTTCATAGAG+GGG | - | chr1_3:61714191-61714210 | Msa0131080:CDS | 40.0% |
| ACTTCCATTGGAACCTACAT+TGG | - | chr1_3:61714674-61714693 | Msa0131080:intron | 40.0% | |
| CTTCCATTGGAACCTACATT+GGG | - | chr1_3:61714675-61714694 | Msa0131080:intron | 40.0% | |
| ! | ACCCAAAGTCCTAAAGCATT+AGG | - | chr1_3:61714756-61714775 | Msa0131080:intron | 40.0% |
| CATATCCCAGTTCAACATTG+TGG | + | chr1_3:61714929-61714948 | None:intergenic | 40.0% | |
| TGGTATTGTACTCACTTGTG+TGG | + | chr1_3:61715018-61715037 | None:intergenic | 40.0% | |
| TGCTCTGATGTATCAAGTGT+CGG | + | chr1_3:61715133-61715152 | None:intergenic | 40.0% | |
| ! | CTGCATCCTTTTCTTATCAC+TGG | + | chr1_3:61715364-61715383 | None:intergenic | 40.0% |
| ! | CCACAACTTTGATGAGTTGA+TGG | + | chr1_3:61715407-61715426 | None:intergenic | 40.0% |
| CCATCAACTCATCAAAGTTG+TGG | - | chr1_3:61715404-61715423 | Msa0131080:intron | 40.0% | |
| AAAGTTGTGGAGTCACTCTA+AGG | - | chr1_3:61715417-61715436 | Msa0131080:intron | 40.0% | |
| GTCGATTGGATGCTTTCAAT+TGG | - | chr1_3:61715514-61715533 | Msa0131080:CDS | 40.0% | |
| TGGATGCTTTCAATTGGAGA+TGG | - | chr1_3:61715520-61715539 | Msa0131080:CDS | 40.0% | |
| AATTTATCCACTCTCGTTGG+TGG | + | chr1_3:61715554-61715573 | None:intergenic | 40.0% | |
| !!! | CTCAGATTTTTTTCCAAGCG+CGG | - | chr1_3:61715676-61715695 | Msa0131080:CDS | 40.0% |
| !!! | TCAGATTTTTTTCCAAGCGC+GGG | - | chr1_3:61715677-61715696 | Msa0131080:CDS | 40.0% |
| !! | TTTGTTCTATCATTGGCTCC+AGG | - | chr1_3:61715744-61715763 | Msa0131080:intron | 40.0% |
| CAAATCAGACGAGAATAGTG+AGG | - | chr1_3:61715803-61715822 | Msa0131080:intron | 40.0% | |
| GATGTCGAGTTATGTTGATG+AGG | - | chr1_3:61715910-61715929 | Msa0131080:intron | 40.0% | |
| CATTGCACAATTCAGTTGCT+TGG | + | chr1_3:61715944-61715963 | None:intergenic | 40.0% | |
| CTGAATTGTGCAATGTGACT+AGG | - | chr1_3:61715949-61715968 | Msa0131080:intron | 40.0% | |
| CCCGGAACTAAGTTTAGTAT+TGG | + | chr1_3:61716055-61716074 | None:intergenic | 40.0% | |
| TCGAGAGTCACTTCCAAAAA+GGG | - | chr1_3:61716232-61716251 | Msa0131080:CDS | 40.0% | |
| GGGGTTGAAAATGCTTATAC+TGG | - | chr1_3:61716252-61716271 | Msa0131080:CDS | 40.0% | |
| ATCACGGTACACAACATTAG+TGG | + | chr1_3:61716305-61716324 | None:intergenic | 40.0% | |
| AAAAAACTCATACCCACCTG+CGG | + | chr1_3:61716362-61716381 | None:intergenic | 40.0% | |
| ! | TTTTGGTCTCATGTACCTTC+AGG | - | chr1_3:61716660-61716679 | Msa0131080:intron | 40.0% |
| !! | CTGATTTTCCGCTTTAAGTG+AGG | - | chr1_3:61716685-61716704 | Msa0131080:intron | 40.0% |
| TGTACACATGCTGACGTTAA+TGG | - | chr1_3:61716722-61716741 | Msa0131080:CDS | 40.0% | |
| TGCATTGCACCTATTGCAAT+TGG | + | chr1_3:61716776-61716795 | None:intergenic | 40.0% | |
| GTGTTTATCTACCGAGACTT+TGG | - | chr1_3:61716832-61716851 | Msa0131080:CDS | 40.0% | |
| ATGTGCATGCACATAGACAT+AGG | + | chr1_3:61717064-61717083 | None:intergenic | 40.0% | |
| GGTATCCGCTATAGAAATCA+TGG | - | chr1_3:61717279-61717298 | Msa0131080:CDS | 40.0% | |
| ! | TGGTAGAGACGATTTTCGTT+GGG | - | chr1_3:61717332-61717351 | Msa0131080:intron | 40.0% |
| ! | GCCGGAATATTTTACATGGA+TGG | + | chr1_3:61717467-61717486 | None:intergenic | 40.0% |
| ! | CTTTTATCGTACACGTGCAA+AGG | - | chr1_3:61718325-61718344 | Msa0131080:CDS | 40.0% |
| TACCTGTGATTTAGTGTGGA+AGG | - | chr1_3:61712975-61712994 | Msa0131080:three_prime_UTR | 40.0% | |
| AACCTTCCACACTAAATCAC+AGG | + | chr1_3:61712980-61712999 | None:intergenic | 40.0% | |
| GGAAGGTTAGAGAAGAAGTT+AGG | - | chr1_3:61712992-61713011 | Msa0131080:three_prime_UTR | 40.0% | |
| GTAAAAATTGACCTGCCATG+TGG | + | chr1_3:61713072-61713091 | None:intergenic | 40.0% | |
| !! | AGCTGTTTTCATAGCTACTG+TGG | - | chr1_3:61713253-61713272 | Msa0131080:three_prime_UTR | 40.0% |
| GACTCAACTGTCTATTCTGT+TGG | + | chr1_3:61719142-61719161 | None:intergenic | 40.0% | |
| AGAATAGACAGTTGAGTCGA+AGG | - | chr1_3:61719144-61719163 | Msa0131080:CDS | 40.0% | |
| GAATAGACAGTTGAGTCGAA+GGG | - | chr1_3:61719145-61719164 | Msa0131080:CDS | 40.0% | |
| CGGGAAGTAAAATCGTTCAA+GGG | + | chr1_3:61719269-61719288 | None:intergenic | 40.0% | |
| ! | CCTTGAACGATTTTACTTCC+CGG | - | chr1_3:61719267-61719286 | Msa0131080:intron | 40.0% |
| CGGAGAAATATTCTCTGCAA+TGG | - | chr1_3:61719287-61719306 | Msa0131080:intron | 40.0% | |
| !! | TTCTAAAGCTTCAAAACGGC+AGG | - | chr1_3:61719635-61719654 | Msa0131080:intron | 40.0% |
| TCAAAACGGCAGGTTAGTAA+TGG | - | chr1_3:61719645-61719664 | Msa0131080:intron | 40.0% | |
| AATTGCAACTGCGGTTATTG+CGG | - | chr1_3:61719673-61719692 | Msa0131080:intron | 40.0% | |
| CAATAGTGTCCACAACACAA+GGG | + | chr1_3:61719750-61719769 | None:intergenic | 40.0% | |
| TGTGGACACTATTGCATTTG+TGG | - | chr1_3:61719756-61719775 | Msa0131080:intron | 40.0% | |
| ATATAGTGACATACGTGGTG+TGG | - | chr1_3:61719864-61719883 | Msa0131080:intron | 40.0% | |
| TTTCTATTGGCCATGATTCC+CGG | - | chr1_3:61720010-61720029 | Msa0131080:intron | 40.0% | |
| TTAGACCTGTAGCAATTTGG+CGG | + | chr1_3:61720040-61720059 | None:intergenic | 40.0% | |
| TTTCAGAATGCGATTTCTCG+AGG | - | chr1_3:61720508-61720527 | Msa0131080:intron | 40.0% | |
| ! | GTTGTGAACTCTAATGGATG+CGG | - | chr1_3:61720644-61720663 | Msa0131080:intron | 40.0% |
| !!! | CCCCCCCCTATTTTAAAATT+CGG | + | chr1_3:61720912-61720931 | None:intergenic | 40.0% |
| !!! | CCGAATTTTAAAATAGGGGG+GGG | - | chr1_3:61720909-61720928 | Msa0131080:intron | 40.0% |
| !!! | CGAATTTTAAAATAGGGGGG+GGG | - | chr1_3:61720910-61720929 | Msa0131080:intron | 40.0% |
| ! | AGTGTGCTATTGAACATAGC+TGG | + | chr1_3:61721060-61721079 | None:intergenic | 40.0% |
| GTTCAATAGCACACTCACAA+AGG | - | chr1_3:61721065-61721084 | Msa0131080:intron | 40.0% | |
| ATCATAATAGACCCGTCAAC+AGG | + | chr1_3:61721108-61721127 | None:intergenic | 40.0% | |
| GACGGGTCTATTATGATAAC+AGG | - | chr1_3:61721111-61721130 | Msa0131080:intron | 40.0% | |
| TTGTGGAGAATATCTCCAGT+TGG | - | chr1_3:61721225-61721244 | Msa0131080:intron | 40.0% | |
| TGTGGAGAATATCTCCAGTT+GGG | - | chr1_3:61721226-61721245 | Msa0131080:intron | 40.0% | |
| CATCTGCCTTTCAACAGAAA+TGG | - | chr1_3:61721422-61721441 | Msa0131080:intron | 40.0% | |
| TTTACAGCTTCTGATATGGC+GGG | - | chr1_3:61721691-61721710 | Msa0131080:intron | 40.0% | |
| !! | TTTATTGATGGTGGACCATG+TGG | - | chr1_3:61721794-61721813 | Msa0131080:intron | 40.0% |
| ! | GACACCATTGCATTTTATGG+AGG | + | chr1_3:61721830-61721849 | None:intergenic | 40.0% |
| ! | TGCGACACCATTGCATTTTA+TGG | + | chr1_3:61721833-61721852 | None:intergenic | 40.0% |
| ! | CTGCCATAGCTAATTTGTGA+AGG | + | chr1_3:61721858-61721877 | None:intergenic | 40.0% |
| TTGGTTATGGCAGATTACAG+TGG | + | chr1_3:61721896-61721915 | None:intergenic | 40.0% | |
| ACTATATGGAAACCCTCCAA+TGG | + | chr1_3:61722101-61722120 | None:intergenic | 40.0% | |
| TCCCTGCATCAACAACTATA+TGG | + | chr1_3:61722115-61722134 | None:intergenic | 40.0% | |
| ATAGTTGTTGATGCAGGGAA+TGG | - | chr1_3:61722116-61722135 | Msa0131080:intron | 40.0% | |
| GAGACTTTCGAGGAAACTTA+CGG | + | chr1_3:61722159-61722178 | None:intergenic | 40.0% | |
| AAATGCTAAGGAGACTTTCG+AGG | + | chr1_3:61722169-61722188 | None:intergenic | 40.0% | |
| ! | GTTTTTCTTTGGGTGAGTGT+TGG | - | chr1_3:61722293-61722312 | Msa0131080:intron | 40.0% |
| ATGGTTTACAAATCTGCGGT+AGG | - | chr1_3:61722337-61722356 | Msa0131080:intron | 40.0% | |
| ! | TGAATAATAGGCAAAGGTGC+TGG | - | chr1_3:61722481-61722500 | Msa0131080:intron | 40.0% |
| !!! | AGTCAATTTTTGGAGCCTGA+TGG | - | chr1_3:61722530-61722549 | Msa0131080:intron | 40.0% |
| TTGTGGGAATAATTTCGGCT+AGG | - | chr1_3:61722564-61722583 | Msa0131080:intron | 40.0% | |
| ACTTGGACTTCGAGTAACAA+TGG | - | chr1_3:61722593-61722612 | Msa0131080:intron | 40.0% | |
| TTTCATTGCTGTCTTGTCCT+CGG | + | chr1_3:61722659-61722678 | None:intergenic | 40.0% | |
| ! | TTTGTTATCAAGGACTGCCT+TGG | + | chr1_3:61722689-61722708 | None:intergenic | 40.0% |
| TCTTTGATACTGATGTGGAC+AGG | - | chr1_3:61722725-61722744 | Msa0131080:intron | 40.0% | |
| AATAGTTGTTCCAGGATGCT+AGG | + | chr1_3:61722992-61723011 | None:intergenic | 40.0% | |
| TCTGTGACAATAGTTGTTCC+AGG | + | chr1_3:61723000-61723019 | None:intergenic | 40.0% | |
| ! | TTTTGTAGCCTCTCTTGAAC+CGG | + | chr1_3:61723240-61723259 | None:intergenic | 40.0% |
| CTATGCACGCTAAGATACTT+TGG | - | chr1_3:61723391-61723410 | Msa0131080:intron | 40.0% | |
| CATCTAGCAATTGAAACGAG+TGG | - | chr1_3:61723763-61723782 | Msa0131080:intron | 40.0% | |
| !! | TGATGATGGTGCATACCTAA+TGG | - | chr1_3:61723816-61723835 | Msa0131080:intron | 40.0% |
| !!! | GGAGGAAGCAATGTTTTAAC+TGG | - | chr1_3:61724093-61724112 | Msa0131080:intron | 40.0% |
| !! | ACCCTCCTTTAAGATCTTGA+TGG | + | chr1_3:61724182-61724201 | None:intergenic | 40.0% |
| GATCTTAAAGGAGGGTAAGT+TGG | - | chr1_3:61724186-61724205 | Msa0131080:intron | 40.0% | |
| !! | GAGGGTAAGTTGGTGTATAA+AGG | - | chr1_3:61724196-61724215 | Msa0131080:intron | 40.0% |
| AATGTTGAGTTCACCGACAT+AGG | - | chr1_3:61724249-61724268 | Msa0131080:intron | 40.0% | |
| ATGTTGAGTTCACCGACATA+GGG | - | chr1_3:61724250-61724269 | Msa0131080:intron | 40.0% | |
| AAGGCTCCTGTAAACTATGA+AGG | - | chr1_3:61724364-61724383 | Msa0131080:intron | 40.0% | |
| AGGCTCCTGTAAACTATGAA+GGG | - | chr1_3:61724365-61724384 | Msa0131080:intron | 40.0% | |
| CATACCCCTTCATAGTTTAC+AGG | + | chr1_3:61724373-61724392 | None:intergenic | 40.0% | |
| ACTATCACATGTTCCAGAGT+TGG | - | chr1_3:61724474-61724493 | Msa0131080:intron | 40.0% | |
| !! | CAGATAAGAGTTTCTGGCTA+TGG | - | chr1_3:61724617-61724636 | Msa0131080:intron | 40.0% |
| !! | ATAAGAGTTTCTGGCTATGG+TGG | - | chr1_3:61724620-61724639 | Msa0131080:intron | 40.0% |
| !! | TAAGAGTTTCTGGCTATGGT+GGG | - | chr1_3:61724621-61724640 | Msa0131080:intron | 40.0% |
| CATGGAGTGATAGTCTAAGA+AGG | + | chr1_3:61724652-61724671 | None:intergenic | 40.0% | |
| ! | TAAGAGGAAGTACAGGATCA+TGG | + | chr1_3:61724670-61724689 | None:intergenic | 40.0% |
| TCTATTAACATAGCAGCAGC+GGG | - | chr1_3:61724937-61724956 | Msa0131080:intron | 40.0% | |
| GATCTTGCACTTAAGCCATA+TGG | + | chr1_3:61725015-61725034 | None:intergenic | 40.0% | |
| ! | TATATCCGAGGTTTCTGAGA+TGG | - | chr1_3:61725052-61725071 | Msa0131080:intron | 40.0% |
| TTTGAACTTGAAGGCTCAGT+TGG | - | chr1_3:61725181-61725200 | Msa0131080:intron | 40.0% | |
| ATGGAACTCGTGATATTGGT+AGG | - | chr1_3:61725321-61725340 | Msa0131080:intron | 40.0% | |
| TGGAACTCGTGATATTGGTA+GGG | - | chr1_3:61725322-61725341 | Msa0131080:intron | 40.0% | |
| TTTCATCACATCCACATGGC+AGG | - | chr1_3:61713058-61713077 | Msa0131080:intron | 45.0% | |
| TAGCTACTGTGGAGAGCTTA+TGG | - | chr1_3:61713264-61713283 | Msa0131080:three_prime_UTR | 45.0% | |
| GTGCATAAGCATACGTATGC+AGG | + | chr1_3:61713357-61713376 | None:intergenic | 45.0% | |
| TCATAATGTATGGAGCTCCG+AGG | - | chr1_3:61713893-61713912 | Msa0131080:intron | 45.0% | |
| CATAATGTATGGAGCTCCGA+GGG | - | chr1_3:61713894-61713913 | Msa0131080:intron | 45.0% | |
| CAAGTCATTATAGGCTCCCT+CGG | + | chr1_3:61713913-61713932 | None:intergenic | 45.0% | |
| CAACCCAATGTAGGTTCCAA+TGG | + | chr1_3:61714681-61714700 | None:intergenic | 45.0% | |
| ! | TTGGTGGTCTATCACAGACA+CGG | + | chr1_3:61714887-61714906 | None:intergenic | 45.0% |
| CAGTTCAACATTGTGGATGG+CGG | + | chr1_3:61714922-61714941 | None:intergenic | 45.0% | |
| GCCATCCACAATGTTGAACT+GGG | - | chr1_3:61714921-61714940 | Msa0131080:intron | 45.0% | |
| TCCCAGTTCAACATTGTGGA+TGG | + | chr1_3:61714925-61714944 | None:intergenic | 45.0% | |
| TGGGATATGATACCACCTCT+GGG | - | chr1_3:61714940-61714959 | Msa0131080:intron | 45.0% | |
| ! | ATACCACCTCTGGGCTTTAT+AGG | - | chr1_3:61714949-61714968 | Msa0131080:intron | 45.0% |
| ! | TACCACCTCTGGGCTTTATA+GGG | - | chr1_3:61714950-61714969 | Msa0131080:intron | 45.0% |
| !!! | GGTCTTTACGTGGTTTTGGA+CGG | - | chr1_3:61715319-61715338 | Msa0131080:CDS | 45.0% |
| CAGAGAACGCAACAAATCAG+AGG | + | chr1_3:61715614-61715633 | None:intergenic | 45.0% | |
| !! | CTCTGATTTGTTGCGTTCTC+TGG | - | chr1_3:61715612-61715631 | Msa0131080:intron | 45.0% |
| ! | ATTGGCTCCAGGAGACAAAA+AGG | - | chr1_3:61715755-61715774 | Msa0131080:intron | 45.0% |
| !! | AAAGGCACTTCAAGATCACC+CGG | + | chr1_3:61716073-61716092 | None:intergenic | 45.0% |
| !! | TCCAAACCGGTTTTCACTCA+TGG | - | chr1_3:61716190-61716209 | Msa0131080:intron | 45.0% |
| TCCATGAGTGAAAACCGGTT+TGG | + | chr1_3:61716194-61716213 | None:intergenic | 45.0% | |
| GTCGAGAGTCACTTCCAAAA+AGG | - | chr1_3:61716231-61716250 | Msa0131080:CDS | 45.0% | |
| CGAGAGTCACTTCCAAAAAG+GGG | - | chr1_3:61716233-61716252 | Msa0131080:CDS | 45.0% | |
| ! | CTGGTAGAGACGATTTTCGT+TGG | - | chr1_3:61717331-61717350 | Msa0131080:intron | 45.0% |
| ! | AGAGACGATTTTCGTTGGGT+AGG | - | chr1_3:61717336-61717355 | Msa0131080:intron | 45.0% |
| ! | GAGACGATTTTCGTTGGGTA+GGG | - | chr1_3:61717337-61717356 | Msa0131080:intron | 45.0% |
| GTGCATATAACTTGGGGTGT+TGG | + | chr1_3:61717400-61717419 | None:intergenic | 45.0% | |
| TTTCATCACATCCACATGGC+AGG | - | chr1_3:61713058-61713077 | Msa0131080:intron | 45.0% | |
| TAGCTACTGTGGAGAGCTTA+TGG | - | chr1_3:61713264-61713283 | Msa0131080:three_prime_UTR | 45.0% | |
| GTGCATAAGCATACGTATGC+AGG | + | chr1_3:61713357-61713376 | None:intergenic | 45.0% | |
| ATTCTGTTGGCAGCATTGTG+AGG | + | chr1_3:61719129-61719148 | None:intergenic | 45.0% | |
| AAGCGAGTTGCGCATATAAG+GGG | + | chr1_3:61719180-61719199 | None:intergenic | 45.0% | |
| GAAGCGAGTTGCGCATATAA+GGG | + | chr1_3:61719181-61719200 | None:intergenic | 45.0% | |
| TGACAATGTGCGCAATTGCA+TGG | + | chr1_3:61719243-61719262 | None:intergenic | 45.0% | |
| CCGGGAAGTAAAATCGTTCA+AGG | + | chr1_3:61719270-61719289 | None:intergenic | 45.0% | |
| AAAAAGCTTGGGAAGGAAGG+TGG | + | chr1_3:61719417-61719436 | None:intergenic | 45.0% | |
| AGCTGCAACAGAAGTCCAAA+TGG | + | chr1_3:61719572-61719591 | None:intergenic | 45.0% | |
| GCAAAATGAGGCTGCATTTG+TGG | - | chr1_3:61719695-61719714 | Msa0131080:intron | 45.0% | |
| CCACAACACAAGGGTTTAAG+AGG | + | chr1_3:61719741-61719760 | None:intergenic | 45.0% | |
| CCTCTTAAACCCTTGTGTTG+TGG | - | chr1_3:61719738-61719757 | Msa0131080:intron | 45.0% | |
| GCAATAGTGTCCACAACACA+AGG | + | chr1_3:61719751-61719770 | None:intergenic | 45.0% | |
| GAACCTGTTGCTGAAGCAAT+AGG | - | chr1_3:61719925-61719944 | Msa0131080:five_prime_UTR | 45.0% | |
| ! | TAGCAATTTGGCGGATATCC+GGG | + | chr1_3:61720031-61720050 | None:intergenic | 45.0% |
| ! | GTAGCAATTTGGCGGATATC+CGG | + | chr1_3:61720032-61720051 | None:intergenic | 45.0% |
| GATATCCGCCAAATTGCTAC+AGG | - | chr1_3:61720032-61720051 | Msa0131080:intron | 45.0% | |
| !! | ATAGTGGACAACTTCTAGGC+CGG | + | chr1_3:61720545-61720564 | None:intergenic | 45.0% |
| GCCTAGAAGTTGTCCACTAT+GGG | - | chr1_3:61720545-61720564 | Msa0131080:intron | 45.0% | |
| !! | ACCCATAGTGGACAACTTCT+AGG | + | chr1_3:61720549-61720568 | None:intergenic | 45.0% |
| TAGAAGTTGTCCACTATGGG+TGG | - | chr1_3:61720548-61720567 | Msa0131080:intron | 45.0% | |
| AGAAGTTGTCCACTATGGGT+GGG | - | chr1_3:61720549-61720568 | Msa0131080:intron | 45.0% | |
| TAAATGTCACCCACCCATAG+TGG | + | chr1_3:61720561-61720580 | None:intergenic | 45.0% | |
| GAATAAGAATCTGCTTGGCC+AGG | + | chr1_3:61720673-61720692 | None:intergenic | 45.0% | |
| TCAGATGAGGGACCAAATTC+AGG | - | chr1_3:61720850-61720869 | Msa0131080:intron | 45.0% | |
| TGGTTGTGTATGATCCCAAC+TGG | + | chr1_3:61721243-61721262 | None:intergenic | 45.0% | |
| TAATGTCCACGGGTAGTGAA+TGG | - | chr1_3:61721329-61721348 | Msa0131080:intron | 45.0% | |
| AAATTGCCATTCACTACCCG+TGG | + | chr1_3:61721338-61721357 | None:intergenic | 45.0% | |
| !! | TGACTTGCTGTTCACAGACA+GGG | + | chr1_3:61721404-61721423 | None:intergenic | 45.0% |
| !! | ATGACTTGCTGTTCACAGAC+AGG | + | chr1_3:61721405-61721424 | None:intergenic | 45.0% |
| !! | TGGAGCCGTTTTATTGATGG+TGG | - | chr1_3:61721785-61721804 | Msa0131080:intron | 45.0% |
| GGAGGAATTGTCTTTCCACA+TGG | + | chr1_3:61721812-61721831 | None:intergenic | 45.0% | |
| GTTATGGCAGATTACAGTGG+CGG | + | chr1_3:61721893-61721912 | None:intergenic | 45.0% | |
| TTCATTGCTGTCTTGTCCTC+GGG | + | chr1_3:61722658-61722677 | None:intergenic | 45.0% | |
| GATACTGATGTGGACAGGTA+AGG | - | chr1_3:61722730-61722749 | Msa0131080:intron | 45.0% | |
| AACGATTCCGGTTGAACTCA+CGG | + | chr1_3:61722843-61722862 | None:intergenic | 45.0% | |
| TCAAGGCGATCAAACGATTC+CGG | + | chr1_3:61722855-61722874 | None:intergenic | 45.0% | |
| GAATCGTTTGATCGCCTTGA+TGG | - | chr1_3:61722855-61722874 | Msa0131080:intron | 45.0% | |
| AAGAGCAATAGCTGCCATCA+AGG | + | chr1_3:61722872-61722891 | None:intergenic | 45.0% | |
| TGCTAGGCAGAATGATAGAG+AGG | + | chr1_3:61722976-61722995 | None:intergenic | 45.0% | |
| TATCATTCTGCCTAGCATCC+TGG | - | chr1_3:61722979-61722998 | Msa0131080:intron | 45.0% | |
| ACAGACAGTGTGACTTCTGA+TGG | - | chr1_3:61723015-61723034 | Msa0131080:intron | 45.0% | |
| GAGGACGAGAGATAGACTAA+CGG | + | chr1_3:61723096-61723115 | None:intergenic | 45.0% | |
| !! | AAACATCACCGGTTCAAGAG+AGG | - | chr1_3:61723229-61723248 | Msa0131080:intron | 45.0% |
| CTGACAGAACTCTATTGGTG+AGG | - | chr1_3:61723735-61723754 | Msa0131080:intron | 45.0% | |
| GCAATTGAAACGAGTGGACA+TGG | - | chr1_3:61723769-61723788 | Msa0131080:intron | 45.0% | |
| AGAACTACCACACATTGTGC+AGG | - | chr1_3:61724023-61724042 | Msa0131080:intron | 45.0% | |
| ATCTTGACCTGCACAATGTG+TGG | + | chr1_3:61724033-61724052 | None:intergenic | 45.0% | |
| TGGTCTAATAGAAGGACTCC+AGG | - | chr1_3:61724113-61724132 | Msa0131080:intron | 45.0% | |
| GATACAGCATGTCCCTATGT+CGG | + | chr1_3:61724265-61724284 | None:intergenic | 45.0% | |
| TTCAGATCTTTCCGGGAGTA+TGG | - | chr1_3:61724286-61724305 | Msa0131080:intron | 45.0% | |
| CTCTGATCCAAACCTGCAAA+AGG | - | chr1_3:61724345-61724364 | Msa0131080:intron | 45.0% | |
| ! | AGTTTACAGGAGCCTTTTGC+AGG | + | chr1_3:61724360-61724379 | None:intergenic | 45.0% |
| GGCTCCTGTAAACTATGAAG+GGG | - | chr1_3:61724366-61724385 | Msa0131080:intron | 45.0% | |
| ! | GTGTATGCTACTTCCAACTC+TGG | + | chr1_3:61724490-61724509 | None:intergenic | 45.0% |
| AATGCCTTAGCAGCTTGTGT+TGG | - | chr1_3:61724702-61724721 | Msa0131080:intron | 45.0% | |
| AGTTCCAACACAAGCTGCTA+AGG | + | chr1_3:61724709-61724728 | None:intergenic | 45.0% | |
| AACGAAGATGCTGTGAAGCT+TGG | - | chr1_3:61724797-61724816 | Msa0131080:intron | 45.0% | |
| TGTTGTGCTTGCAGCTGTAA+AGG | - | chr1_3:61724823-61724842 | Msa0131080:intron | 45.0% | |
| !! | AGCGGGTTGAGGTGAATTAA+AGG | - | chr1_3:61724954-61724973 | Msa0131080:intron | 45.0% |
| GGTTGAACTTCACGGTAGTA+GGG | + | chr1_3:61725293-61725312 | None:intergenic | 45.0% | |
| !! | AAATAAAATTCAAATATTAA+GGG | + | chr1_3:61713413-61713432 | None:intergenic | 5.0% |
| !! | AAAATAAAATTCAAATATTA+AGG | + | chr1_3:61713414-61713433 | None:intergenic | 5.0% |
| !!! | TTATATTAAATAAAAGTTTT+TGG | + | chr1_3:61713831-61713850 | None:intergenic | 5.0% |
| !!! | ATCTATATTAATTTATTTTA+AGG | - | chr1_3:61718107-61718126 | Msa0131080:intron | 5.0% |
| !! | AAATAAAATTCAAATATTAA+GGG | + | chr1_3:61713413-61713432 | None:intergenic | 5.0% |
| !! | AAAATAAAATTCAAATATTA+AGG | + | chr1_3:61713414-61713433 | None:intergenic | 5.0% |
| !! | AAAAAATAAAAAAGTAAAAT+AGG | - | chr1_3:61720874-61720893 | Msa0131080:intron | 5.0% |
| !! | AAAAATAAAAAAGTAAAATA+GGG | - | chr1_3:61720875-61720894 | Msa0131080:intron | 5.0% |
| !! | TATTAAACAATTAAAATATT+TGG | - | chr1_3:61721765-61721784 | Msa0131080:intron | 5.0% |
| !!! | ATTTTTTTCTATATAAAAAA+AGG | + | chr1_3:61722237-61722256 | None:intergenic | 5.0% |
| !! | ATATACTAAATATTTAAATA+TGG | - | chr1_3:61723701-61723720 | Msa0131080:intron | 5.0% |
| !! | TAATGATTAATAATTTATAA+TGG | + | chr1_3:61724572-61724591 | None:intergenic | 5.0% |
| CGAGGGAGCCTATAATGACT+TGG | - | chr1_3:61713911-61713930 | Msa0131080:intron | 50.0% | |
| TCTCACACTTAAGGGAGGGA+TGG | + | chr1_3:61714096-61714115 | None:intergenic | 50.0% | |
| !! | TCAACATTGTGGATGGCGGA+TGG | + | chr1_3:61714918-61714937 | None:intergenic | 50.0% |
| CGCCATCCACAATGTTGAAC+TGG | - | chr1_3:61714920-61714939 | Msa0131080:intron | 50.0% | |
| CTGGGATATGATACCACCTC+TGG | - | chr1_3:61714939-61714958 | Msa0131080:intron | 50.0% | |
| ! | ACCACCTCTGGGCTTTATAG+GGG | - | chr1_3:61714951-61714970 | Msa0131080:intron | 50.0% |
| ACCATTTGGGGGTCTTTACG+TGG | - | chr1_3:61715309-61715328 | Msa0131080:CDS | 50.0% | |
| ACCACGTAAAGACCCCCAAA+TGG | + | chr1_3:61715313-61715332 | None:intergenic | 50.0% | |
| ! | TGGGGGTCTTTACGTGGTTT+TGG | - | chr1_3:61715315-61715334 | Msa0131080:CDS | 50.0% |
| CTCATCTTGCTCGACACGAA+CGG | + | chr1_3:61715482-61715501 | None:intergenic | 50.0% | |
| ATAGGATCCACCAACGAGAG+TGG | - | chr1_3:61715544-61715563 | Msa0131080:intron | 50.0% | |
| TGATCAACTGTGTCCAGCGT+GGG | + | chr1_3:61715714-61715733 | None:intergenic | 50.0% | |
| ATGATCAACTGTGTCCAGCG+TGG | + | chr1_3:61715715-61715734 | None:intergenic | 50.0% | |
| TACTACGAGACAGTTCCCGT+TGG | - | chr1_3:61716099-61716118 | Msa0131080:intron | 50.0% | |
| AGCGGAAAATCAGCACCTGA+AGG | + | chr1_3:61716678-61716697 | None:intergenic | 50.0% | |
| TCGTAATTCTAGCCCGTGCT+TGG | - | chr1_3:61717681-61717700 | Msa0131080:intron | 50.0% | |
| GGAAGCGAGTTGCGCATATA+AGG | + | chr1_3:61719182-61719201 | None:intergenic | 50.0% | |
| GTCAACTTCCCTGAAGGAGA+GGG | + | chr1_3:61719203-61719222 | None:intergenic | 50.0% | |
| TGTCAACTTCCCTGAAGGAG+AGG | + | chr1_3:61719204-61719223 | None:intergenic | 50.0% | |
| CTCCTTCAGGGAAGTTGACA+TGG | - | chr1_3:61719204-61719223 | Msa0131080:CDS | 50.0% | |
| GTCCATGTCAACTTCCCTGA+AGG | + | chr1_3:61719209-61719228 | None:intergenic | 50.0% | |
| TCAGGGAAGTTGACATGGAC+TGG | - | chr1_3:61719209-61719228 | Msa0131080:CDS | 50.0% | |
| GCGGTTATTGCGGCAAAATG+AGG | - | chr1_3:61719683-61719702 | Msa0131080:intron | 50.0% | |
| ATACGTGGTGTGGCTCTTGA+TGG | - | chr1_3:61719874-61719893 | Msa0131080:intron | 50.0% | |
| CTTCAGCAACAGGTTCAGTG+AGG | + | chr1_3:61719921-61719940 | None:intergenic | 50.0% | |
| GCTCCTATTGCTTCAGCAAC+AGG | + | chr1_3:61719931-61719950 | None:intergenic | 50.0% | |
| GGCCTAGAAGTTGTCCACTA+TGG | - | chr1_3:61720544-61720563 | Msa0131080:intron | 50.0% | |
| TTCACCAATGCTGGTGGTCT+TGG | - | chr1_3:61721455-61721474 | Msa0131080:intron | 50.0% | |
| TCACCAATGCTGGTGGTCTT+GGG | - | chr1_3:61721456-61721475 | Msa0131080:intron | 50.0% | |
| AAAGCAGTTCGCAAAGCAGC+TGG | - | chr1_3:61721623-61721642 | Msa0131080:intron | 50.0% | |
| CGCAAAGCAGCTGGAAACAT+AGG | - | chr1_3:61721632-61721651 | Msa0131080:intron | 50.0% | |
| GATTGGGTTTGACCCTTTCG+TGG | + | chr1_3:61721718-61721737 | None:intergenic | 50.0% | |
| CGAAAGGGTCAAACCCAATC+TGG | - | chr1_3:61721718-61721737 | Msa0131080:intron | 50.0% | |
| AAGGGTCAAACCCAATCTGG+TGG | - | chr1_3:61721721-61721740 | Msa0131080:intron | 50.0% | |
| AGGGTCAAACCCAATCTGGT+GGG | - | chr1_3:61721722-61721741 | Msa0131080:intron | 50.0% | |
| CAAATGGGTCCCACCAGATT+GGG | + | chr1_3:61721734-61721753 | None:intergenic | 50.0% | |
| TCTGCCCACAGAGAAACCAT+TGG | - | chr1_3:61722082-61722101 | Msa0131080:intron | 50.0% | |
| CCCTCCAATGGTTTCTCTGT+GGG | + | chr1_3:61722089-61722108 | None:intergenic | 50.0% | |
| CCCACAGAGAAACCATTGGA+GGG | - | chr1_3:61722086-61722105 | Msa0131080:intron | 50.0% | |
| ACCCTCCAATGGTTTCTCTG+TGG | + | chr1_3:61722090-61722109 | None:intergenic | 50.0% | |
| !! | CAAAGGTGCTGGAACCTCTT+GGG | - | chr1_3:61722492-61722511 | Msa0131080:intron | 50.0% |
| !! | AAAGGTGCTGGAACCTCTTG+GGG | - | chr1_3:61722493-61722512 | Msa0131080:intron | 50.0% |
| CCAGAAGTTATTGCCCCAAG+AGG | + | chr1_3:61722509-61722528 | None:intergenic | 50.0% | |
| CCTCTTGGGGCAATAACTTC+TGG | - | chr1_3:61722506-61722525 | Msa0131080:intron | 50.0% | |
| ! | TTTCGGCTAGGCATTGCACT+TGG | - | chr1_3:61722576-61722595 | Msa0131080:intron | 50.0% |
| TCGGGATTGGGGATATGGTT+TGG | + | chr1_3:61722640-61722659 | None:intergenic | 50.0% | |
| AAACCATATCCCCAATCCCG+AGG | - | chr1_3:61722639-61722658 | Msa0131080:intron | 50.0% | |
| TTCTTCTAGATCCGCTGCTG+TGG | - | chr1_3:61722807-61722826 | Msa0131080:intron | 50.0% | |
| TCTCAGGTGGCAAACATCAC+CGG | - | chr1_3:61723218-61723237 | Msa0131080:intron | 50.0% | |
| GAGTGGACATGGAGCTCTTA+AGG | - | chr1_3:61723780-61723799 | Msa0131080:intron | 50.0% | |
| CTTGCTTCTGCAAGAGCTTC+TGG | - | chr1_3:61724063-61724082 | Msa0131080:intron | 50.0% | |
| TCTGCAAGAGCTTCTGGTGT+AGG | - | chr1_3:61724069-61724088 | Msa0131080:intron | 50.0% | |
| CTCAGTTCTGCAGCAAAAGC+TGG | + | chr1_3:61724141-61724160 | None:intergenic | 50.0% | |
| GCACAGTTTCTCCATACTCC+CGG | + | chr1_3:61724300-61724319 | None:intergenic | 50.0% | |
| ! | ACAGGAGCCTTTTGCAGGTT+TGG | + | chr1_3:61724355-61724374 | None:intergenic | 50.0% |
| GCAGCTGTAAAGGAGTTTGC+AGG | - | chr1_3:61724833-61724852 | Msa0131080:intron | 50.0% | |
| AAGGCTCAGTTGGCAAGATG+CGG | - | chr1_3:61725191-61725210 | Msa0131080:intron | 50.0% | |
| GGGTTGAACTTCACGGTAGT+AGG | + | chr1_3:61725294-61725313 | None:intergenic | 50.0% | |
| GTTGCAGAGCGGAGAAACTG+AGG | + | chr1_3:61713034-61713053 | None:intergenic | 55.0% | |
| !! | ATGGCGGATGGAGTGCTTCT+TGG | + | chr1_3:61714906-61714925 | None:intergenic | 55.0% |
| TCCCCTATAAAGCCCAGAGG+TGG | + | chr1_3:61714955-61714974 | None:intergenic | 55.0% | |
| GACTCCCCTATAAAGCCCAG+AGG | + | chr1_3:61714958-61714977 | None:intergenic | 55.0% | |
| CTTGACACGCGTGTCCAGTT+GGG | - | chr1_3:61715189-61715208 | Msa0131080:intron | 55.0% | |
| TTGACACGCGTGTCCAGTTG+GGG | - | chr1_3:61715190-61715209 | Msa0131080:intron | 55.0% | |
| CAAGTGTCAAACGCCCCAAC+TGG | + | chr1_3:61715206-61715225 | None:intergenic | 55.0% | |
| CCTGCGGCATCAAGAACGAT+CGG | + | chr1_3:61716346-61716365 | None:intergenic | 55.0% | |
| ATCGTTCTTGATGCCGCAGG+TGG | - | chr1_3:61716346-61716365 | Msa0131080:intron | 55.0% | |
| TCGTTCTTGATGCCGCAGGT+GGG | - | chr1_3:61716347-61716366 | Msa0131080:intron | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | - | chr1_3:61717686-61717705 | Msa0131080:intron | 55.0% | |
| TTGGAAACCCGTGCCAAGCA+CGG | + | chr1_3:61717697-61717716 | None:intergenic | 55.0% | |
| GTTGCAGAGCGGAGAAACTG+AGG | + | chr1_3:61713034-61713053 | None:intergenic | 55.0% | |
| AACTCGCTTCCCTCTCCTTC+AGG | - | chr1_3:61719191-61719210 | Msa0131080:CDS | 55.0% | |
| ACTCGCTTCCCTCTCCTTCA+GGG | - | chr1_3:61719192-61719211 | Msa0131080:CDS | 55.0% | |
| !! | TGTGGCTCTTGATGGTGTCG+AGG | - | chr1_3:61719882-61719901 | Msa0131080:intron | 55.0% |
| !! | GTGGCTCTTGATGGTGTCGA+GGG | - | chr1_3:61719883-61719902 | Msa0131080:intron | 55.0% |
| !! | TCTTGATGGTGTCGAGGGAG+AGG | - | chr1_3:61719888-61719907 | Msa0131080:intron | 55.0% |
| !! | CTTGATGGTGTCGAGGGAGA+GGG | - | chr1_3:61719889-61719908 | Msa0131080:intron | 55.0% |
| !! | TTGATGGTGTCGAGGGAGAG+GGG | - | chr1_3:61719890-61719909 | Msa0131080:intron | 55.0% |
| ! | GCAATAGGAGCTGCTTTCGC+TGG | - | chr1_3:61719940-61719959 | Msa0131080:five_prime_UTR | 55.0% |
| ! | TAGGAGCTGCTTTCGCTGGA+TGG | - | chr1_3:61719944-61719963 | Msa0131080:five_prime_UTR | 55.0% |
| ! | AGCTGCTTTCGCTGGATGGT+TGG | - | chr1_3:61719948-61719967 | Msa0131080:five_prime_UTR | 55.0% |
| TGCTTTCGCTGGATGGTTGG+TGG | - | chr1_3:61719951-61719970 | Msa0131080:five_prime_UTR | 55.0% | |
| ! | TGGCGGATATCCGGGAATCA+TGG | + | chr1_3:61720023-61720042 | None:intergenic | 55.0% |
| GCGATTTCTCGAGGTCTTGC+TGG | - | chr1_3:61720517-61720536 | Msa0131080:intron | 55.0% | |
| ! | CTCTAATGGATGCGGTTGCC+TGG | - | chr1_3:61720652-61720671 | Msa0131080:intron | 55.0% |
| CTTCCCAAGACCACCAGCAT+TGG | + | chr1_3:61721462-61721481 | None:intergenic | 55.0% | |
| !! | TGATATGGCGGGTCCACGAA+AGG | - | chr1_3:61721702-61721721 | Msa0131080:intron | 55.0% |
| !! | GATATGGCGGGTCCACGAAA+GGG | - | chr1_3:61721703-61721722 | Msa0131080:intron | 55.0% |
| GCAAATGGGTCCCACCAGAT+TGG | + | chr1_3:61721735-61721754 | None:intergenic | 55.0% | |
| GCCCACAGAGAAACCATTGG+AGG | - | chr1_3:61722085-61722104 | Msa0131080:intron | 55.0% | |
| GTTGATGCAGGGAATGGAGC+AGG | - | chr1_3:61722122-61722141 | Msa0131080:intron | 55.0% | |
| !! | GCAAAGGTGCTGGAACCTCT+TGG | - | chr1_3:61722491-61722510 | Msa0131080:intron | 55.0% |
| TGTCCTCGGGATTGGGGATA+TGG | + | chr1_3:61722645-61722664 | None:intergenic | 55.0% | |
| CTGTCTTGTCCTCGGGATTG+GGG | + | chr1_3:61722651-61722670 | None:intergenic | 55.0% | |
| GCTGTCTTGTCCTCGGGATT+GGG | + | chr1_3:61722652-61722671 | None:intergenic | 55.0% | |
| TGCTGTCTTGTCCTCGGGAT+TGG | + | chr1_3:61722653-61722672 | None:intergenic | 55.0% | |
| TCCGCTGCTGTGGATTTCAC+TGG | - | chr1_3:61722817-61722836 | Msa0131080:intron | 55.0% | |
| GCCAGTGAAATCCACAGCAG+CGG | + | chr1_3:61722821-61722840 | None:intergenic | 55.0% | |
| TCACTGGCCGTGAGTTCAAC+CGG | - | chr1_3:61722833-61722852 | Msa0131080:intron | 55.0% | |
| GCAAGAGCTTCTGGTGTAGG+TGG | - | chr1_3:61724072-61724091 | Msa0131080:intron | 55.0% | |
| AGAGCTTCTGGTGTAGGTGG+AGG | - | chr1_3:61724075-61724094 | Msa0131080:intron | 55.0% | |
| ! | CTGCAGCAAAAGCTGGTTCC+TGG | + | chr1_3:61724134-61724153 | None:intergenic | 55.0% |
| !! | GAGTTTCTGGCTATGGTGGG+TGG | - | chr1_3:61724624-61724643 | Msa0131080:intron | 55.0% |
| !! | AACATAGCAGCAGCGGGTTG+AGG | - | chr1_3:61724943-61724962 | Msa0131080:intron | 55.0% |
| ! | GCGGATGGAGTGCTTCTTGG+TGG | + | chr1_3:61714903-61714922 | None:intergenic | 60.0% |
| TGGACACGCGTGTCAAGCAC+AGG | + | chr1_3:61715186-61715205 | None:intergenic | 60.0% | |
| GCTTGACACGCGTGTCCAGT+TGG | - | chr1_3:61715188-61715207 | Msa0131080:intron | 60.0% | |
| GAGCAAGTATCTCCCGCGCT+TGG | + | chr1_3:61715692-61715711 | None:intergenic | 60.0% | |
| GGAGATACTTGCTCCCACGC+TGG | - | chr1_3:61715698-61715717 | Msa0131080:CDS | 60.0% | |
| CCGATCGTTCTTGATGCCGC+AGG | - | chr1_3:61716343-61716362 | Msa0131080:intron | 60.0% | |
| !! | CTTGGGGTGTTGGAGTCTCG+AGG | + | chr1_3:61717390-61717409 | None:intergenic | 60.0% |
| TTCTAGCCCGTGCTTGGCAC+GGG | - | chr1_3:61717687-61717706 | Msa0131080:intron | 60.0% | |
| TGGAAACCCGTGCCAAGCAC+GGG | + | chr1_3:61717696-61717715 | None:intergenic | 60.0% | |
| ! | TGATGGTGTCGAGGGAGAGG+GGG | - | chr1_3:61719891-61719910 | Msa0131080:intron | 60.0% |
| TCTCGAGGTCTTGCTGGTGC+CGG | - | chr1_3:61720523-61720542 | Msa0131080:intron | 60.0% | |
| GATGCAGGGAATGGAGCAGG+TGG | - | chr1_3:61722125-61722144 | Msa0131080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 61712963 | 61725403 | 61712963 | ID=Msa0131080;Name=Msa0131080 |
| chr1_3 | mRNA | 61712963 | 61725403 | 61712963 | ID=Msa0131080-mRNA-1;Parent=Msa0131080;Name=Msa0131080-mRNA-1;_AED=0.14;_eAED=0.14;_QI=128|1|1|1|0.84|0.8|20|426|615 |
| chr1_3 | exon | 61712963 | 61713029 | 61712963 | ID=Msa0131080-mRNA-1:exon:20541;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61713112 | 61713578 | 61713112 | ID=Msa0131080-mRNA-1:exon:20540;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61713669 | 61713746 | 61713669 | ID=Msa0131080-mRNA-1:exon:20539;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61713979 | 61714075 | 61713979 | ID=Msa0131080-mRNA-1:exon:20538;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61714167 | 61714321 | 61714167 | ID=Msa0131080-mRNA-1:exon:20537;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61714529 | 61714624 | 61714529 | ID=Msa0131080-mRNA-1:exon:20536;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61715081 | 61715142 | 61715081 | ID=Msa0131080-mRNA-1:exon:20535;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61715300 | 61715372 | 61715300 | ID=Msa0131080-mRNA-1:exon:20534;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61715469 | 61715550 | 61715469 | ID=Msa0131080-mRNA-1:exon:20533;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61715620 | 61715737 | 61715620 | ID=Msa0131080-mRNA-1:exon:20532;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61715815 | 61715875 | 61715815 | ID=Msa0131080-mRNA-1:exon:20531;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61716209 | 61716273 | 61716209 | ID=Msa0131080-mRNA-1:exon:20530;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61716713 | 61716949 | 61716713 | ID=Msa0131080-mRNA-1:exon:20529;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61717234 | 61717322 | 61717234 | ID=Msa0131080-mRNA-1:exon:20528;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61717800 | 61717852 | 61717800 | ID=Msa0131080-mRNA-1:exon:20527;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61718313 | 61718496 | 61718313 | ID=Msa0131080-mRNA-1:exon:20526;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61718710 | 61718776 | 61718710 | ID=Msa0131080-mRNA-1:exon:20525;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61719058 | 61719273 | 61719058 | ID=Msa0131080-mRNA-1:exon:20524;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61719909 | 61719970 | 61719909 | ID=Msa0131080-mRNA-1:exon:20523;Parent=Msa0131080-mRNA-1 |
| chr1_3 | exon | 61725331 | 61725403 | 61725331 | ID=Msa0131080-mRNA-1:exon:20522;Parent=Msa0131080-mRNA-1 |
| chr1_3 | five_prime_UTR | 61725331 | 61725403 | 61725331 | ID=Msa0131080-mRNA-1:five_prime_utr;Parent=Msa0131080-mRNA-1 |
| chr1_3 | five_prime_UTR | 61719916 | 61719970 | 61719916 | ID=Msa0131080-mRNA-1:five_prime_utr;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61719909 | 61719915 | 61719909 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61719058 | 61719273 | 61719058 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61718710 | 61718776 | 61718710 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61718313 | 61718496 | 61718313 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61717800 | 61717852 | 61717800 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61717234 | 61717322 | 61717234 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61716713 | 61716949 | 61716713 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61716209 | 61716273 | 61716209 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61715815 | 61715875 | 61715815 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61715620 | 61715737 | 61715620 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61715469 | 61715550 | 61715469 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61715300 | 61715372 | 61715300 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61715081 | 61715142 | 61715081 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61714529 | 61714624 | 61714529 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61714167 | 61714321 | 61714167 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61713979 | 61714075 | 61713979 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61713669 | 61713746 | 61713669 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | CDS | 61713471 | 61713578 | 61713471 | ID=Msa0131080-mRNA-1:cds;Parent=Msa0131080-mRNA-1 |
| chr1_3 | three_prime_UTR | 61713112 | 61713470 | 61713112 | ID=Msa0131080-mRNA-1:three_prime_utr;Parent=Msa0131080-mRNA-1 |
| chr1_3 | three_prime_UTR | 61712963 | 61713029 | 61712963 | ID=Msa0131080-mRNA-1:three_prime_utr;Parent=Msa0131080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
