Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008340 | sp|Q942D4|BURP3_ORYSJ | 55.932 | 59 | 24 | 1 | 40 | 98 | 192 | 248 | 2.90e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa0008340 | 0.810557 | 1.086258e-50 | -8.615850e-47 |
| Msa0008340 | Msa0011720 | 0.836556 | 8.730263e-57 | -8.615850e-47 |
| Msa0008340 | Msa0011850 | 0.831845 | 1.325330e-55 | -8.615850e-47 |
| Msa0008340 | Msa0015940 | 0.823290 | 1.499815e-53 | -8.615850e-47 |
| Msa0008340 | Msa0017510 | 0.800361 | 1.494214e-48 | -8.615850e-47 |
| Msa0008340 | Msa0024680 | 0.809223 | 2.104105e-50 | -8.615850e-47 |
| Msa0008340 | Msa0032370 | 0.826519 | 2.595009e-54 | -8.615850e-47 |
| Msa0008340 | Msa0032840 | -0.807570 | 4.738543e-50 | -8.615850e-47 |
| Msa0008340 | Msa0044020 | 0.806913 | 6.530090e-50 | -8.615850e-47 |
| Msa0008340 | Msa0046100 | 0.800246 | 1.577133e-48 | -8.615850e-47 |
| Msa0008340 | Msa0047980 | 0.820786 | 5.705089e-53 | -8.615850e-47 |
| Msa0008340 | Msa0048000 | 0.820345 | 7.203172e-53 | -8.615850e-47 |
| Msa0008340 | Msa0050730 | 0.855584 | 5.719339e-62 | -8.615850e-47 |
| Msa0008340 | Msa0050760 | 0.844809 | 6.007566e-59 | -8.615850e-47 |
| Msa0008340 | Msa0060600 | 0.819973 | 8.764057e-53 | -8.615850e-47 |
| Msa0008340 | Msa0084890 | 0.812230 | 4.705863e-51 | -8.615850e-47 |
| Msa0008340 | Msa0095380 | 0.828751 | 7.551966e-55 | -8.615850e-47 |
| Msa0008340 | Msa0096670 | 0.810186 | 1.306259e-50 | -8.615850e-47 |
| Msa0008340 | Msa0102750 | 0.809596 | 1.750005e-50 | -8.615850e-47 |
| Msa0008340 | Msa0105340 | 0.832254 | 1.049560e-55 | -8.615850e-47 |
| Msa0008340 | Msa0105420 | 0.851759 | 7.198007e-61 | -8.615850e-47 |
| Msa0008340 | Msa0110970 | 0.820465 | 6.763061e-53 | -8.615850e-47 |
| Msa0008340 | Msa0114540 | -0.840661 | 7.602482e-58 | -8.615850e-47 |
| Msa0008340 | Msa0120330 | 0.821232 | 4.503933e-53 | -8.615850e-47 |
| Msa0008340 | Msa0124340 | 0.830287 | 3.196778e-55 | -8.615850e-47 |
| Msa0008340 | Msa0131080 | 0.803979 | 2.691902e-49 | -8.615850e-47 |
| Msa0008340 | Msa0143080 | 0.803290 | 3.741166e-49 | -8.615850e-47 |
| Msa0008340 | Msa0148100 | 0.804791 | 1.823085e-49 | -8.615850e-47 |
| Msa0008340 | Msa0151690 | 0.834410 | 3.046037e-56 | -8.615850e-47 |
| Msa0008340 | Msa0157290 | 0.800293 | 1.542390e-48 | -8.615850e-47 |
| Msa0008340 | Msa0168100 | 0.804015 | 2.645772e-49 | -8.615850e-47 |
| Msa0008340 | Msa0172350 | 0.843369 | 1.461489e-58 | -8.615850e-47 |
| Msa0008340 | Msa0184020 | 0.811032 | 8.575561e-51 | -8.615850e-47 |
| Msa0008340 | Msa0185480 | 0.810679 | 1.022398e-50 | -8.615850e-47 |
| Msa0008340 | Msa0185590 | 0.807589 | 4.694754e-50 | -8.615850e-47 |
| Msa0008340 | Msa0188630 | 0.822075 | 2.875557e-53 | -8.615850e-47 |
| Msa0008340 | Msa0189950 | 0.822183 | 2.715066e-53 | -8.615850e-47 |
| Msa0008340 | Msa0193650 | 0.804949 | 1.689790e-49 | -8.615850e-47 |
| Msa0008340 | Msa0196130 | -0.829558 | 4.812731e-55 | -8.615850e-47 |
| Msa0008340 | Msa0197230 | 0.807092 | 5.984905e-50 | -8.615850e-47 |
| Msa0008340 | Msa0205850 | 0.802235 | 6.175912e-49 | -8.615850e-47 |
| Msa0008340 | Msa0207000 | 0.801633 | 8.213696e-49 | -8.615850e-47 |
| Msa0008340 | Msa0208520 | 0.815978 | 7.007246e-52 | -8.615850e-47 |
| Msa0008340 | Msa0208630 | 0.800649 | 1.305087e-48 | -8.615850e-47 |
| Msa0008340 | Msa0217400 | 0.824294 | 8.725493e-54 | -8.615850e-47 |
| Msa0008340 | Msa0219070 | 0.807045 | 6.123835e-50 | -8.615850e-47 |
| Msa0008340 | Msa0222920 | 0.839966 | 1.154516e-57 | -8.615850e-47 |
| Msa0008340 | Msa0227510 | 0.854566 | 1.129906e-61 | -8.615850e-47 |
| Msa0008340 | Msa0230550 | -0.802568 | 5.274015e-49 | -8.615850e-47 |
| Msa0008340 | Msa0230770 | 0.824979 | 6.017591e-54 | -8.615850e-47 |
| Msa0008340 | Msa0235890 | 0.830079 | 3.594239e-55 | -8.615850e-47 |
| Msa0008340 | Msa0236980 | 0.803104 | 4.087293e-49 | -8.615850e-47 |
| Msa0008340 | Msa0238890 | 0.814160 | 1.774286e-51 | -8.615850e-47 |
| Msa0008340 | Msa0243690 | 0.816706 | 4.814826e-52 | -8.615850e-47 |
| Msa0008340 | Msa0243710 | 0.808476 | 3.039734e-50 | -8.615850e-47 |
| Msa0008340 | Msa0246430 | 0.805086 | 1.581569e-49 | -8.615850e-47 |
| Msa0008340 | Msa0248980 | 0.807854 | 4.124522e-50 | -8.615850e-47 |
| Msa0008340 | Msa0252180 | 0.803531 | 3.335396e-49 | -8.615850e-47 |
| Msa0008340 | Msa0257680 | 0.801825 | 7.498336e-49 | -8.615850e-47 |
| Msa0008340 | Msa0259560 | 0.816457 | 5.474856e-52 | -8.615850e-47 |
| Msa0008340 | Msa0260810 | 0.825622 | 4.239906e-54 | -8.615850e-47 |
| Msa0008340 | Msa0260830 | 0.804789 | 1.825221e-49 | -8.615850e-47 |
| Msa0008340 | Msa0264350 | 0.830354 | 3.078117e-55 | -8.615850e-47 |
| Msa0008340 | Msa0267760 | 0.840333 | 9.260779e-58 | -8.615850e-47 |
| Msa0008340 | Msa0270270 | 0.813219 | 2.859621e-51 | -8.615850e-47 |
| Msa0008340 | Msa0281360 | 0.800610 | 1.329423e-48 | -8.615850e-47 |
| Msa0008340 | Msa0282250 | 0.805920 | 1.057305e-49 | -8.615850e-47 |
| Msa0008340 | Msa0287310 | 0.805257 | 1.456853e-49 | -8.615850e-47 |
| Msa0008340 | Msa0289890 | 0.811978 | 5.342583e-51 | -8.615850e-47 |
| Msa0008340 | Msa0296560 | 0.812192 | 4.797142e-51 | -8.615850e-47 |
| Msa0008340 | Msa0296760 | 0.841339 | 5.044613e-58 | -8.615850e-47 |
| Msa0008340 | Msa0299890 | 0.820652 | 6.125305e-53 | -8.615850e-47 |
| Msa0008340 | Msa0302450 | 0.807855 | 4.121918e-50 | -8.615850e-47 |
| Msa0008340 | Msa0308830 | 0.828022 | 1.132667e-54 | -8.615850e-47 |
| Msa0008340 | Msa0311700 | 0.812746 | 3.631180e-51 | -8.615850e-47 |
| Msa0008340 | Msa0314210 | 0.806873 | 6.659349e-50 | -8.615850e-47 |
| Msa0008340 | Msa0315150 | 0.806358 | 8.550063e-50 | -8.615850e-47 |
| Msa0008340 | Msa0316850 | 0.821017 | 5.050057e-53 | -8.615850e-47 |
| Msa0008340 | Msa0320100 | 0.811277 | 7.588218e-51 | -8.615850e-47 |
| Msa0008340 | Msa0323180 | 0.804115 | 2.522125e-49 | -8.615850e-47 |
| Msa0008340 | Msa0325850 | 0.801061 | 1.075261e-48 | -8.615850e-47 |
| Msa0008340 | Msa0328210 | 0.813377 | 2.639731e-51 | -8.615850e-47 |
| Msa0008340 | Msa0334040 | 0.813745 | 2.190822e-51 | -8.615850e-47 |
| Msa0008340 | Msa0334350 | 0.803677 | 3.109982e-49 | -8.615850e-47 |
| Msa0008340 | Msa0335040 | 0.843802 | 1.119690e-58 | -8.615850e-47 |
| Msa0008340 | Msa0335270 | 0.804368 | 2.233863e-49 | -8.615850e-47 |
| Msa0008340 | Msa0343810 | 0.820516 | 6.580836e-53 | -8.615850e-47 |
| Msa0008340 | Msa0344830 | 0.803470 | 3.432352e-49 | -8.615850e-47 |
| Msa0008340 | Msa0369850 | 0.824608 | 7.359385e-54 | -8.615850e-47 |
| Msa0008340 | Msa0377530 | 0.807936 | 3.962401e-50 | -8.615850e-47 |
| Msa0008340 | Msa0378340 | 0.810444 | 1.148953e-50 | -8.615850e-47 |
| Msa0008340 | Msa0380040 | 0.814361 | 1.601928e-51 | -8.615850e-47 |
| Msa0008340 | Msa0389340 | 0.815013 | 1.148854e-51 | -8.615850e-47 |
| Msa0008340 | Msa0393680 | 0.802978 | 4.341358e-49 | -8.615850e-47 |
| Msa0008340 | Msa0410500 | 0.818708 | 1.702693e-52 | -8.615850e-47 |
| Msa0008340 | Msa0414950 | -0.824051 | 9.953205e-54 | -8.615850e-47 |
| Msa0008340 | Msa0415810 | 0.807449 | 5.026991e-50 | -8.615850e-47 |
| Msa0008340 | Msa0419970 | 0.801284 | 9.683123e-49 | -8.615850e-47 |
| Msa0008340 | Msa0423040 | 0.820471 | 6.740370e-53 | -8.615850e-47 |
| Msa0008340 | Msa0426330 | 0.815122 | 1.086584e-51 | -8.615850e-47 |
| Msa0008340 | Msa0427220 | 0.802151 | 6.427916e-49 | -8.615850e-47 |
| Msa0008340 | Msa0427690 | 0.812771 | 3.584280e-51 | -8.615850e-47 |
| Msa0008340 | Msa0429290 | 0.806890 | 6.603152e-50 | -8.615850e-47 |
| Msa0008340 | Msa0449760 | 0.801390 | 9.212111e-49 | -8.615850e-47 |
| Msa0008340 | Msa0449820 | 0.815276 | 1.004280e-51 | -8.615850e-47 |
| Msa0008340 | Msa0449830 | 0.832804 | 7.668936e-56 | -8.615850e-47 |
| Msa0008340 | Msa0452960 | 0.833642 | 4.743013e-56 | -8.615850e-47 |
| Msa0008340 | Msa0467960 | -0.801988 | 6.943835e-49 | -8.615850e-47 |
| Msa0008340 | Msa0469160 | 0.810034 | 1.408462e-50 | -8.615850e-47 |
| Msa0008340 | Msa0469910 | -0.801561 | 8.495999e-49 | -8.615850e-47 |
| Msa0008340 | Msa0473240 | 0.815474 | 9.074628e-52 | -8.615850e-47 |
| Msa0008340 | Msa0474950 | 0.811708 | 6.117405e-51 | -8.615850e-47 |
| Msa0008340 | Msa0475580 | 0.809876 | 1.523133e-50 | -8.615850e-47 |
| Msa0008340 | Msa0480320 | 0.810632 | 1.046603e-50 | -8.615850e-47 |
| Msa0008340 | Msa0484780 | 0.804904 | 1.726711e-49 | -8.615850e-47 |
| Msa0008340 | Msa0485420 | 0.809150 | 2.180998e-50 | -8.615850e-47 |
| Msa0008340 | Msa0497420 | 0.812592 | 3.923222e-51 | -8.615850e-47 |
| Msa0008340 | Msa0506890 | 0.806762 | 7.028751e-50 | -8.615850e-47 |
| Msa0008340 | Msa0508200 | 0.803799 | 2.933971e-49 | -8.615850e-47 |
| Msa0008340 | Msa0509970 | 0.801306 | 9.583881e-49 | -8.615850e-47 |
| Msa0008340 | Msa0517490 | 0.812495 | 4.119566e-51 | -8.615850e-47 |
| Msa0008340 | Msa0518520 | 0.809234 | 2.092473e-50 | -8.615850e-47 |
| Msa0008340 | Msa0519220 | 0.806896 | 6.584524e-50 | -8.615850e-47 |
| Msa0008340 | Msa0521880 | 0.805052 | 1.607607e-49 | -8.615850e-47 |
| Msa0008340 | Msa0523460 | 0.802546 | 5.328773e-49 | -8.615850e-47 |
| Msa0008340 | Msa0526710 | 0.840044 | 1.101687e-57 | -8.615850e-47 |
| Msa0008340 | Msa0535030 | 0.825717 | 4.024544e-54 | -8.615850e-47 |
| Msa0008340 | Msa0535060 | 0.825580 | 4.337953e-54 | -8.615850e-47 |
| Msa0008340 | Msa0535450 | 0.828358 | 9.397117e-55 | -8.615850e-47 |
| Msa0008340 | Msa0546300 | 0.822873 | 1.876739e-53 | -8.615850e-47 |
| Msa0008340 | Msa0560470 | 0.811138 | 8.134772e-51 | -8.615850e-47 |
| Msa0008340 | Msa0578970 | 0.808468 | 3.051312e-50 | -8.615850e-47 |
| Msa0008340 | Msa0579720 | 0.800313 | 1.527923e-48 | -8.615850e-47 |
| Msa0008340 | Msa0582110 | 0.801714 | 7.902055e-49 | -8.615850e-47 |
| Msa0008340 | Msa0585900 | 0.834432 | 3.007841e-56 | -8.615850e-47 |
| Msa0008340 | Msa0587690 | 0.827603 | 1.427899e-54 | -8.615850e-47 |
| Msa0008340 | Msa0591060 | 0.818891 | 1.547090e-52 | -8.615850e-47 |
| Msa0008340 | Msa0591770 | 0.824450 | 8.021309e-54 | -8.615850e-47 |
| Msa0008340 | Msa0610590 | 0.815021 | 1.144353e-51 | -8.615850e-47 |
| Msa0008340 | Msa0619980 | 0.805041 | 1.616554e-49 | -8.615850e-47 |
| Msa0008340 | Msa0620810 | 0.818587 | 1.813643e-52 | -8.615850e-47 |
| Msa0008340 | Msa0621590 | 0.806568 | 7.724105e-50 | -8.615850e-47 |
| Msa0008340 | Msa0624730 | 0.807430 | 5.073791e-50 | -8.615850e-47 |
| Msa0008340 | Msa0627910 | 0.806230 | 9.099611e-50 | -8.615850e-47 |
| Msa0008340 | Msa0638280 | 0.825095 | 5.649440e-54 | -8.615850e-47 |
| Msa0008340 | Msa0638320 | 0.822096 | 2.844014e-53 | -8.615850e-47 |
| Msa0008340 | Msa0642720 | 0.818355 | 2.046572e-52 | -8.615850e-47 |
| Msa0008340 | Msa0649980 | 0.806858 | 6.707464e-50 | -8.615850e-47 |
| Msa0008340 | Msa0651190 | 0.809298 | 2.027562e-50 | -8.615850e-47 |
| Msa0008340 | Msa0669200 | 0.801390 | 9.209627e-49 | -8.615850e-47 |
| Msa0008340 | Msa0669850 | 0.819198 | 1.317027e-52 | -8.615850e-47 |
| Msa0008340 | Msa0670980 | 0.827006 | 1.985697e-54 | -8.615850e-47 |
| Msa0008340 | Msa0677270 | 0.830583 | 2.705731e-55 | -8.615850e-47 |
| Msa0008340 | Msa0692230 | 0.811435 | 7.009896e-51 | -8.615850e-47 |
| Msa0008340 | Msa0693380 | 0.835689 | 1.449988e-56 | -8.615850e-47 |
| Msa0008340 | Msa0697400 | 0.803629 | 3.181512e-49 | -8.615850e-47 |
| Msa0008340 | Msa0697690 | 0.804850 | 1.772288e-49 | -8.615850e-47 |
| Msa0008340 | Msa0703590 | 0.802056 | 6.722805e-49 | -8.615850e-47 |
| Msa0008340 | Msa0706370 | 0.827452 | 1.552049e-54 | -8.615850e-47 |
| Msa0008340 | Msa0709190 | 0.806112 | 9.635301e-50 | -8.615850e-47 |
| Msa0008340 | Msa0716560 | 0.820220 | 7.693686e-53 | -8.615850e-47 |
| Msa0008340 | Msa0735620 | -0.801022 | 1.095351e-48 | -8.615850e-47 |
| Msa0008340 | Msa0743260 | 0.804635 | 1.965320e-49 | -8.615850e-47 |
| Msa0008340 | Msa0754720 | -0.820545 | 6.483551e-53 | -8.615850e-47 |
| Msa0008340 | Msa0756630 | -0.803807 | 2.922101e-49 | -8.615850e-47 |
| Msa0008340 | Msa0757950 | 0.828169 | 1.043655e-54 | -8.615850e-47 |
| Msa0008340 | Msa0760380 | 0.806301 | 8.792759e-50 | -8.615850e-47 |
| Msa0008340 | Msa0775260 | 0.803889 | 2.810732e-49 | -8.615850e-47 |
| Msa0008340 | Msa0778320 | 0.804273 | 2.338068e-49 | -8.615850e-47 |
| Msa0008340 | Msa0787750 | 0.812471 | 4.170560e-51 | -8.615850e-47 |
| Msa0008340 | Msa0789570 | 0.807795 | 4.244265e-50 | -8.615850e-47 |
| Msa0008340 | Msa0804680 | 0.817063 | 4.004316e-52 | -8.615850e-47 |
| Msa0008340 | Msa0810480 | 0.823158 | 1.609893e-53 | -8.615850e-47 |
| Msa0008340 | Msa0814320 | 0.809269 | 2.057001e-50 | -8.615850e-47 |
| Msa0008340 | Msa0822990 | 0.808991 | 2.359414e-50 | -8.615850e-47 |
| Msa0008340 | Msa0824680 | 0.809164 | 2.165919e-50 | -8.615850e-47 |
| Msa0008340 | Msa0831420 | 0.800651 | 1.303905e-48 | -8.615850e-47 |
| Msa0008340 | Msa0837660 | 0.800593 | 1.340333e-48 | -8.615850e-47 |
| Msa0008340 | Msa0840260 | 0.814110 | 1.820180e-51 | -8.615850e-47 |
| Msa0008340 | Msa0850960 | 0.801091 | 1.060354e-48 | -8.615850e-47 |
| Msa0008340 | Msa0862100 | 0.817352 | 3.448598e-52 | -8.615850e-47 |
| Msa0008340 | Msa0863870 | 0.819424 | 1.169793e-52 | -8.615850e-47 |
| Msa0008340 | Msa0866120 | 0.836161 | 1.100262e-56 | -8.615850e-47 |
| Msa0008340 | Msa0878290 | 0.809278 | 2.047349e-50 | -8.615850e-47 |
| Msa0008340 | Msa0881020 | 0.805584 | 1.244199e-49 | -8.615850e-47 |
| Msa0008340 | Msa0881480 | 0.818007 | 2.453783e-52 | -8.615850e-47 |
| Msa0008340 | Msa0882510 | 0.805218 | 1.484083e-49 | -8.615850e-47 |
| Msa0008340 | Msa0893810 | 0.850317 | 1.836204e-60 | -8.615850e-47 |
| Msa0008340 | Msa0896210 | 0.822968 | 1.783645e-53 | -8.615850e-47 |
| Msa0008340 | Msa0896220 | 0.839444 | 1.579033e-57 | -8.615850e-47 |
| Msa0008340 | Msa0907700 | 0.835506 | 1.613263e-56 | -8.615850e-47 |
| Msa0008340 | Msa0908050 | 0.821709 | 3.494938e-53 | -8.615850e-47 |
| Msa0008340 | Msa0908170 | 0.835191 | 1.937272e-56 | -8.615850e-47 |
| Msa0008340 | Msa0910980 | -0.826922 | 2.079473e-54 | -8.615850e-47 |
| Msa0008340 | Msa0922540 | 0.829931 | 3.905459e-55 | -8.615850e-47 |
| Msa0008340 | Msa0930780 | 0.833448 | 5.302479e-56 | -8.615850e-47 |
| Msa0008340 | Msa0933230 | 0.812356 | 4.417665e-51 | -8.615850e-47 |
| Msa0008340 | Msa0933310 | 0.807538 | 4.813794e-50 | -8.615850e-47 |
| Msa0008340 | Msa0933440 | 0.806084 | 9.767121e-50 | -8.615850e-47 |
| Msa0008340 | Msa0936270 | 0.807083 | 6.009588e-50 | -8.615850e-47 |
| Msa0008340 | Msa0937670 | 0.823871 | 1.096951e-53 | -8.615850e-47 |
| Msa0008340 | Msa0944770 | 0.809157 | 2.173593e-50 | -8.615850e-47 |
| Msa0008340 | Msa0954550 | 0.805919 | 1.057760e-49 | -8.615850e-47 |
| Msa0008340 | Msa0955300 | 0.816612 | 5.056606e-52 | -8.615850e-47 |
| Msa0008340 | Msa0959010 | 0.807751 | 4.338124e-50 | -8.615850e-47 |
| Msa0008340 | Msa0971090 | 0.807827 | 4.179565e-50 | -8.615850e-47 |
| Msa0008340 | Msa0992490 | -0.803420 | 3.516262e-49 | -8.615850e-47 |
| Msa0008340 | Msa0993530 | 0.823039 | 1.716418e-53 | -8.615850e-47 |
| Msa0008340 | Msa0996080 | 0.859539 | 3.857971e-63 | -8.615850e-47 |
| Msa0008340 | Msa0996090 | 0.800430 | 1.446523e-48 | -8.615850e-47 |
| Msa0008340 | Msa1008490 | 0.820568 | 6.404478e-53 | -8.615850e-47 |
| Msa0008340 | Msa1012810 | 0.802077 | 6.658435e-49 | -8.615850e-47 |
| Msa0008340 | Msa1015060 | 0.812535 | 4.038027e-51 | -8.615850e-47 |
| Msa0008340 | Msa1019020 | 0.807689 | 4.471598e-50 | -8.615850e-47 |
| Msa0008340 | Msa1020710 | 0.854181 | 1.460411e-61 | -8.615850e-47 |
| Msa0008340 | Msa1026760 | 0.820187 | 7.832033e-53 | -8.615850e-47 |
| Msa0008340 | Msa1026790 | 0.816826 | 4.526025e-52 | -8.615850e-47 |
| Msa0008340 | Msa1037000 | 0.817487 | 3.215344e-52 | -8.615850e-47 |
| Msa0008340 | Msa1040120 | 0.831855 | 1.317613e-55 | -8.615850e-47 |
| Msa0008340 | Msa1044340 | 0.802572 | 5.263705e-49 | -8.615850e-47 |
| Msa0008340 | Msa1075220 | -0.804802 | 1.813936e-49 | -8.615850e-47 |
| Msa0008340 | Msa1082500 | 0.821521 | 3.862567e-53 | -8.615850e-47 |
| Msa0008340 | Msa1083210 | 0.809425 | 1.904257e-50 | -8.615850e-47 |
| Msa0008340 | Msa1087470 | 0.854683 | 1.045470e-61 | -8.615850e-47 |
| Msa0008340 | Msa1089530 | 0.806073 | 9.816982e-50 | -8.615850e-47 |
| Msa0008340 | Msa1097840 | 0.813740 | 2.196722e-51 | -8.615850e-47 |
| Msa0008340 | Msa1099030 | 0.822258 | 2.607684e-53 | -8.615850e-47 |
| Msa0008340 | Msa1109570 | 0.827044 | 1.943838e-54 | -8.615850e-47 |
| Msa0008340 | Msa1115330 | 0.809548 | 1.792390e-50 | -8.615850e-47 |
| Msa0008340 | Msa1116130 | -0.809818 | 1.568053e-50 | -8.615850e-47 |
| Msa0008340 | Msa1127770 | 0.801077 | 1.067487e-48 | -8.615850e-47 |
| Msa0008340 | Msa1132520 | 0.803239 | 3.833581e-49 | -8.615850e-47 |
| Msa0008340 | Msa1147570 | 0.810050 | 1.397881e-50 | -8.615850e-47 |
| Msa0008340 | Msa1162550 | -0.808666 | 2.768355e-50 | -8.615850e-47 |
| Msa0008340 | Msa1170280 | 0.824235 | 9.010324e-54 | -8.615850e-47 |
| Msa0008340 | Msa1172590 | 0.808212 | 3.461188e-50 | -8.615850e-47 |
| Msa0008340 | Msa1175330 | 0.836258 | 1.040038e-56 | -8.615850e-47 |
| Msa0008340 | Msa1179940 | 0.840037 | 1.106817e-57 | -8.615850e-47 |
| Msa0008340 | Msa1179970 | 0.840571 | 8.027691e-58 | -8.615850e-47 |
| Msa0008340 | Msa1185540 | 0.854046 | 1.597450e-61 | -8.615850e-47 |
| Msa0008340 | Msa1188910 | 0.831446 | 1.661259e-55 | -8.615850e-47 |
| Msa0008340 | Msa1199560 | 0.805119 | 1.556560e-49 | -8.615850e-47 |
| Msa0008340 | Msa1206020 | 0.806533 | 7.856733e-50 | -8.615850e-47 |
| Msa0008340 | Msa1211150 | -0.801200 | 1.007310e-48 | -8.615850e-47 |
| Msa0008340 | Msa1217660 | 0.820527 | 6.543932e-53 | -8.615850e-47 |
| Msa0008340 | Msa1217810 | 0.824461 | 7.973680e-54 | -8.615850e-47 |
| Msa0008340 | Msa1218960 | 0.823170 | 1.599898e-53 | -8.615850e-47 |
| Msa0008340 | Msa1219430 | 0.802973 | 4.350612e-49 | -8.615850e-47 |
| Msa0008340 | Msa1221560 | 0.822997 | 1.755360e-53 | -8.615850e-47 |
| Msa0008340 | Msa1224830 | 0.800376 | 1.483734e-48 | -8.615850e-47 |
| Msa0008340 | Msa1228210 | 0.812118 | 4.979471e-51 | -8.615850e-47 |
| Msa0008340 | Msa1228890 | 0.812129 | 4.951334e-51 | -8.615850e-47 |
| Msa0008340 | Msa1229660 | 0.819760 | 9.807930e-53 | -8.615850e-47 |
| Msa0008340 | Msa1233500 | 0.800184 | 1.623575e-48 | -8.615850e-47 |
| Msa0008340 | Msa1235630 | 0.837187 | 6.026035e-57 | -8.615850e-47 |
| Msa0008340 | Msa1236100 | 0.809092 | 2.244875e-50 | -8.615850e-47 |
| Msa0008340 | Msa1237030 | 0.833078 | 6.558044e-56 | -8.615850e-47 |
| Msa0008340 | Msa1240310 | 0.807545 | 4.796211e-50 | -8.615850e-47 |
| Msa0008340 | Msa1243010 | 0.824082 | 9.786839e-54 | -8.615850e-47 |
| Msa0008340 | Msa1243040 | 0.833069 | 6.589039e-56 | -8.615850e-47 |
| Msa0008340 | Msa1264020 | 0.802694 | 4.968108e-49 | -8.615850e-47 |
| Msa0008340 | Msa1265070 | 0.837509 | 4.985619e-57 | -8.615850e-47 |
| Msa0008340 | Msa1265260 | 0.814361 | 1.601928e-51 | -8.615850e-47 |
| Msa0008340 | Msa1267840 | 0.813993 | 1.931647e-51 | -8.615850e-47 |
| Msa0008340 | Msa1269080 | 0.821403 | 4.112607e-53 | -8.615850e-47 |
| Msa0008340 | Msa1271300 | 0.804189 | 2.433690e-49 | -8.615850e-47 |
| Msa0008340 | Msa1277280 | 0.827897 | 1.213516e-54 | -8.615850e-47 |
| Msa0008340 | Msa1278840 | 0.806281 | 8.875868e-50 | -8.615850e-47 |
| Msa0008340 | Msa1279210 | 0.810328 | 1.217170e-50 | -8.615850e-47 |
| Msa0008340 | Msa1280560 | 0.820710 | 5.941134e-53 | -8.615850e-47 |
| Msa0008340 | Msa1283990 | 0.809683 | 1.676565e-50 | -8.615850e-47 |
| Msa0008340 | Msa1284260 | 0.801068 | 1.072072e-48 | -8.615850e-47 |
| Msa0008340 | Msa1285730 | 0.800503 | 1.397797e-48 | -8.615850e-47 |
| Msa0008340 | Msa1297090 | 0.815654 | 8.277368e-52 | -8.615850e-47 |
| Msa0008340 | Msa1299360 | 0.806863 | 6.689990e-50 | -8.615850e-47 |
| Msa0008340 | Msa1303720 | 0.818635 | 1.768764e-52 | -8.615850e-47 |
| Msa0008340 | Msa1303780 | 0.806769 | 7.003531e-50 | -8.615850e-47 |
| Msa0008340 | Msa1314340 | 0.802048 | 6.750140e-49 | -8.615850e-47 |
| Msa0008340 | Msa1315870 | 0.850789 | 1.353017e-60 | -8.615850e-47 |
| Msa0008340 | Msa1318120 | 0.805742 | 1.152375e-49 | -8.615850e-47 |
| Msa0008340 | Msa1320740 | 0.830644 | 2.614958e-55 | -8.615850e-47 |
| Msa0008340 | Msa1323060 | 0.813167 | 2.936027e-51 | -8.615850e-47 |
| Msa0008340 | Msa1323190 | 0.803078 | 4.139092e-49 | -8.615850e-47 |
| Msa0008340 | Msa1327760 | 0.817719 | 2.850720e-52 | -8.615850e-47 |
| Msa0008340 | Msa1328700 | 0.804201 | 2.419842e-49 | -8.615850e-47 |
| Msa0008340 | Msa1328850 | 0.812670 | 3.771485e-51 | -8.615850e-47 |
| Msa0008340 | Msa1337730 | 0.822966 | 1.785498e-53 | -8.615850e-47 |
| Msa0008340 | Msa1340020 | 0.823597 | 1.271121e-53 | -8.615850e-47 |
| Msa0008340 | Msa1340650 | 0.808167 | 3.537402e-50 | -8.615850e-47 |
| Msa0008340 | Msa1343070 | 0.802228 | 6.198728e-49 | -8.615850e-47 |
| Msa0008340 | Msa1343820 | 0.809037 | 2.305884e-50 | -8.615850e-47 |
| Msa0008340 | Msa1348360 | 0.827363 | 1.630132e-54 | -8.615850e-47 |
| Msa0008340 | Msa1349270 | 0.804104 | 2.534955e-49 | -8.615850e-47 |
| Msa0008340 | Msa1362510 | 0.830662 | 2.589034e-55 | -8.615850e-47 |
| Msa0008340 | Msa1363590 | 0.804556 | 2.041298e-49 | -8.615850e-47 |
| Msa0008340 | Msa1369530 | 0.819294 | 1.252490e-52 | -8.615850e-47 |
| Msa0008340 | Msa1370650 | 0.809346 | 1.980346e-50 | -8.615850e-47 |
| Msa0008340 | Msa1371430 | 0.809546 | 1.793600e-50 | -8.615850e-47 |
| Msa0008340 | Msa1373330 | 0.814356 | 1.606138e-51 | -8.615850e-47 |
| Msa0008340 | Msa1382720 | 0.806720 | 7.171107e-50 | -8.615850e-47 |
| Msa0008340 | Msa1384350 | 0.814098 | 1.831906e-51 | -8.615850e-47 |
| Msa0008340 | Msa1390310 | 0.835335 | 1.781441e-56 | -8.615850e-47 |
| Msa0008340 | Msa1397050 | 0.812913 | 3.338032e-51 | -8.615850e-47 |
| Msa0008340 | Msa1398860 | 0.817793 | 2.742041e-52 | -8.615850e-47 |
| Msa0008340 | Msa1404540 | 0.834408 | 3.049609e-56 | -8.615850e-47 |
| Msa0008340 | Msa1404730 | 0.824035 | 1.004024e-53 | -8.615850e-47 |
| Msa0008340 | Msa1408790 | 0.863249 | 2.848269e-64 | -8.615850e-47 |
| Msa0008340 | Msa1423450 | 0.812376 | 4.374505e-51 | -8.615850e-47 |
| Msa0008340 | Msa1423880 | 0.801464 | 8.892772e-49 | -8.615850e-47 |
| Msa0008340 | Msa1425250 | 0.811669 | 6.237280e-51 | -8.615850e-47 |
| Msa0008340 | Msa1427760 | 0.814050 | 1.876775e-51 | -8.615850e-47 |
| Msa0008340 | Msa1431040 | 0.813829 | 2.099762e-51 | -8.615850e-47 |
| Msa0008340 | Msa1431060 | 0.825617 | 4.250364e-54 | -8.615850e-47 |
| Msa0008340 | Msa1436040 | 0.855954 | 4.458439e-62 | -8.615850e-47 |
| Msa0008340 | Msa1439230 | 0.803693 | 3.085946e-49 | -8.615850e-47 |
| Msa0008340 | Msa1440600 | 0.847253 | 1.300221e-59 | -8.615850e-47 |
| Msa0008340 | Msa1459180 | 0.843293 | 1.531372e-58 | -8.615850e-47 |
| Msa0008340 | Msa1463970 | 0.818214 | 2.203276e-52 | -8.615850e-47 |
| Msa0008340 | Msa1466460 | 0.834798 | 2.433097e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008340 | MtrunA17_Chr1g0147271 | 55.556 | 117 | 18 | 3 | 16 | 98 | 92 | 208 | 1.65e-29 | 108 |
| Msa0008340 | MtrunA17_Chr1g0147331 | 62.821 | 78 | 20 | 2 | 21 | 98 | 81 | 149 | 1.63e-24 | 94.0 |
| Msa0008340 | MtrunA17_Chr1g0146631 | 62.821 | 78 | 20 | 2 | 21 | 98 | 81 | 149 | 4.91e-24 | 92.8 |
| Msa0008340 | MtrunA17_Chr3g0139431 | 49.398 | 83 | 36 | 2 | 20 | 98 | 62 | 142 | 7.65e-18 | 76.3 |
| Msa0008340 | MtrunA17_Chr1g0147291 | 63.934 | 61 | 17 | 2 | 40 | 98 | 33 | 90 | 8.03e-17 | 72.8 |
| Msa0008340 | MtrunA17_Chr1g0147261 | 58.621 | 58 | 23 | 1 | 41 | 98 | 69 | 125 | 1.12e-15 | 70.1 |
| Msa0008340 | MtrunA17_Chr1g0147231 | 67.925 | 53 | 15 | 2 | 47 | 98 | 50 | 101 | 3.95e-15 | 66.2 |
| Msa0008340 | MtrunA17_Chr1g0147301 | 43.750 | 96 | 40 | 4 | 14 | 98 | 16 | 108 | 4.95e-15 | 68.2 |
| Msa0008340 | MtrunA17_Chr1g0147321 | 66.038 | 53 | 15 | 1 | 46 | 98 | 12 | 61 | 5.42e-15 | 67.8 |
| Msa0008340 | MtrunA17_Chr1g0147251 | 55.172 | 58 | 22 | 1 | 41 | 98 | 15 | 68 | 6.30e-14 | 64.7 |
| Msa0008340 | MtrunA17_Chr1g0147311 | 41.414 | 99 | 41 | 4 | 14 | 98 | 84 | 179 | 3.29e-13 | 63.5 |
| Msa0008340 | MtrunA17_Chr1g0147241 | 50.877 | 57 | 27 | 1 | 42 | 98 | 83 | 138 | 3.72e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008340 | AT5G25610.1 | 45.946 | 74 | 34 | 2 | 31 | 98 | 141 | 214 | 2.11e-13 | 64.7 |
Find 11 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAATTAGCAACTTCTTT+AGG | 0.259477 | 1_1:-12021997 | None:intergenic |
| AAGAAGAAAAGTGCTACATT+TGG | 0.370145 | 1_1:-12021895 | None:intergenic |
| TTGGACTTCCAGTACATCTC+AGG | 0.384187 | 1_1:-12018760 | None:intergenic |
| TTAGAAAAGGATTTACATCA+AGG | 0.470233 | 1_1:+12021916 | Msa0008340:CDS |
| ATTAAAGGACAACCAGGAAA+AGG | 0.504978 | 1_1:+12021817 | Msa0008340:CDS |
| TGGACTTCCAGTACATCTCA+GGG | 0.572403 | 1_1:-12018759 | None:intergenic |
| GCAGCATAATTGTAAAACAT+AGG | 0.586082 | 1_1:-12021847 | None:intergenic |
| AAAGGACAACCAGGAAAAGG+TGG | 0.597740 | 1_1:+12021820 | Msa0008340:CDS |
| GACTTCCAGTACATCTCAGG+GGG | 0.635397 | 1_1:-12018757 | None:intergenic |
| AAAGATATTAAAGGACAACC+AGG | 0.645079 | 1_1:+12021811 | Msa0008340:CDS |
| GGACTTCCAGTACATCTCAG+GGG | 0.720454 | 1_1:-12018758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr1_1:12020099-12020118 | Msa0008340:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr1_1:12020098-12020117 | Msa0008340:intron | 0.0% |
| !!! | AATGCAATTTTTTTTTTTTA+AGG | + | chr1_1:12016741-12016760 | Msa0008340:intron | 10.0% |
| !!! | AAGTTTAAAACATATAAATA+GGG | - | chr1_1:12016790-12016809 | None:intergenic | 10.0% |
| !!! | AAAGTTTAAAACATATAAAT+AGG | - | chr1_1:12016791-12016810 | None:intergenic | 10.0% |
| !!! | AAATTTAATACAAAATTTTC+CGG | - | chr1_1:12017810-12017829 | None:intergenic | 10.0% |
| !! | ATAAAATTCCAATATATATA+AGG | + | chr1_1:12018374-12018393 | Msa0008340:intron | 10.0% |
| !! | TAAAATTCCAATATATATAA+GGG | + | chr1_1:12018375-12018394 | Msa0008340:intron | 10.0% |
| !!! | TTTTATATGACATAATAAAA+AGG | - | chr1_1:12018661-12018680 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTATATATGATTA+GGG | - | chr1_1:12019133-12019152 | None:intergenic | 10.0% |
| !!! | TTTTCTTTTTATATATGATT+AGG | - | chr1_1:12019134-12019153 | None:intergenic | 10.0% |
| !!! | TTCATTTTTCATTTTTTTTT+AGG | + | chr1_1:12020313-12020332 | Msa0008340:intron | 10.0% |
| !!! | TCATTTTTCATTTTTTTTTA+GGG | + | chr1_1:12020314-12020333 | Msa0008340:intron | 10.0% |
| !! | CAAATATAACTTTAATTAAT+AGG | + | chr1_1:12020511-12020530 | Msa0008340:intron | 10.0% |
| !! | GTTAAAAGTAATATTAATTA+GGG | - | chr1_1:12020710-12020729 | None:intergenic | 10.0% |
| !! | TGTTAAAAGTAATATTAATT+AGG | - | chr1_1:12020711-12020730 | None:intergenic | 10.0% |
| !!! | AGTTTAAAACATATAAATAG+GGG | - | chr1_1:12016789-12016808 | None:intergenic | 15.0% |
| !!! | TTTGTTTACATTTTTTTTGA+AGG | - | chr1_1:12017154-12017173 | None:intergenic | 15.0% |
| !! | TAACTAATTAAGGATATTAA+TGG | + | chr1_1:12017250-12017269 | Msa0008340:intron | 15.0% |
| !! | AAAATATCCCTTATATATAT+TGG | - | chr1_1:12018385-12018404 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTAAGCAAAAGA+AGG | + | chr1_1:12019080-12019099 | Msa0008340:intron | 15.0% |
| !!! | TTTTTTTTTAAGCAAAAGAA+GGG | + | chr1_1:12019081-12019100 | Msa0008340:intron | 15.0% |
| !!! | TGAAATGAATCAATTTTTTT+GGG | - | chr1_1:12020462-12020481 | None:intergenic | 15.0% |
| !! | AGTGAAATATATTAGTAAAT+TGG | - | chr1_1:12020737-12020756 | None:intergenic | 15.0% |
| !! | TAAAAAAAAATTCTTGAAAG+AGG | - | chr1_1:12020897-12020916 | None:intergenic | 15.0% |
| !! | TTTCAATAGTAAATTTATCA+TGG | + | chr1_1:12021525-12021544 | Msa0008340:intron | 15.0% |
| !! | AACATAGAAAAAGATATTAA+AGG | + | chr1_1:12021802-12021821 | Msa0008340:CDS | 15.0% |
| !!! | TATAAATTTAGAACTAGTCA+AGG | - | chr1_1:12016521-12016540 | None:intergenic | 20.0% |
| !! | AATCTTATCTTCATTTCTAA+AGG | - | chr1_1:12016569-12016588 | None:intergenic | 20.0% |
| !!! | GAAAAAGTTGGTTTAAAAAT+AGG | - | chr1_1:12016821-12016840 | None:intergenic | 20.0% |
| !!! | TTTCATTGACTTTCTAAATA+GGG | - | chr1_1:12016846-12016865 | None:intergenic | 20.0% |
| !!! | ATTTCATTGACTTTCTAAAT+AGG | - | chr1_1:12016847-12016866 | None:intergenic | 20.0% |
| !! | ACATATTAGTTCAAAAAACA+TGG | - | chr1_1:12017118-12017137 | None:intergenic | 20.0% |
| !! | GAAAAATGATCATAATAATC+TGG | + | chr1_1:12017346-12017365 | Msa0008340:intron | 20.0% |
| !!! | ATCAAACGTTTTCTTTTAAA+AGG | - | chr1_1:12017714-12017733 | None:intergenic | 20.0% |
| !! | GAAATGTAAGCAAAAATATA+TGG | - | chr1_1:12017769-12017788 | None:intergenic | 20.0% |
| !! | CATATCTATCTTTAATTAAC+CGG | + | chr1_1:12017788-12017807 | Msa0008340:intron | 20.0% |
| !! | TAGTTAATCAATTTCCATTA+TGG | + | chr1_1:12018530-12018549 | Msa0008340:intron | 20.0% |
| !! | TTAAAAGTTGAAGAATAAGT+GGG | - | chr1_1:12018636-12018655 | None:intergenic | 20.0% |
| !! | ATTAAAAGTTGAAGAATAAG+TGG | - | chr1_1:12018637-12018656 | None:intergenic | 20.0% |
| !!! | GTTTTTTTGGTTTTTCTTTT+TGG | - | chr1_1:12019215-12019234 | None:intergenic | 20.0% |
| !! | CACTTATTACTGATATTATA+AGG | - | chr1_1:12019781-12019800 | None:intergenic | 20.0% |
| !! | CTTATAATATCAGTAATAAG+TGG | + | chr1_1:12019779-12019798 | Msa0008340:intron | 20.0% |
| !!! | TTTCATTTTTTTTTAGGGAT+CGG | + | chr1_1:12020319-12020338 | Msa0008340:intron | 20.0% |
| !!! | GTGAAATGAATCAATTTTTT+TGG | - | chr1_1:12020463-12020482 | None:intergenic | 20.0% |
| !! | TTTAATACACTATCTTTGAT+TGG | - | chr1_1:12021074-12021093 | None:intergenic | 20.0% |
| !!! | TTGAATTCTTTAAAGAGATA+GGG | - | chr1_1:12021340-12021359 | None:intergenic | 20.0% |
| !!! | ATTGAATTCTTTAAAGAGAT+AGG | - | chr1_1:12021341-12021360 | None:intergenic | 20.0% |
| !! | ATTTCAAATTATTAGTATCG+TGG | + | chr1_1:12021489-12021508 | Msa0008340:intron | 20.0% |
| !! | ATAGTAAATTTATCATGGAA+TGG | + | chr1_1:12021530-12021549 | Msa0008340:intron | 20.0% |
| !! | AAGAAGAAAAAAAATACTAC+AGG | + | chr1_1:12021629-12021648 | Msa0008340:intron | 20.0% |
| !! | AAACTAACGAAAATTTATTG+CGG | + | chr1_1:12021667-12021686 | Msa0008340:intron | 20.0% |
| !! | ATCTTCATTTCTAAAGGAAT+GGG | - | chr1_1:12016563-12016582 | None:intergenic | 25.0% |
| !! | TATCTTCATTTCTAAAGGAA+TGG | - | chr1_1:12016564-12016583 | None:intergenic | 25.0% |
| ! | AAATGTTAATGTGTGTCTTT+GGG | - | chr1_1:12016980-12016999 | None:intergenic | 25.0% |
| ! | AAAATGTTAATGTGTGTCTT+TGG | - | chr1_1:12016981-12017000 | None:intergenic | 25.0% |
| ! | TGATATGTATTTAAGAAGTG+AGG | + | chr1_1:12017296-12017315 | Msa0008340:intron | 25.0% |
| ! | ATGGATATAACCAAACAATT+GGG | - | chr1_1:12017481-12017500 | None:intergenic | 25.0% |
| ! | AATCAAAGTCTAATACATTG+AGG | + | chr1_1:12017572-12017591 | Msa0008340:intron | 25.0% |
| !! | GTGATTAGTGAATTTTTGTT+AGG | + | chr1_1:12018170-12018189 | Msa0008340:intron | 25.0% |
| ! | TATCCTCAAATTCCTATAAA+TGG | + | chr1_1:12018433-12018452 | Msa0008340:intron | 25.0% |
| ! | AGTAAGTGAAATAATGATTG+AGG | - | chr1_1:12018492-12018511 | None:intergenic | 25.0% |
| ! | TAAATGACGAAATTCCATAA+TGG | - | chr1_1:12018547-12018566 | None:intergenic | 25.0% |
| ! | AGGAACATACTAGAATAATT+TGG | - | chr1_1:12018605-12018624 | None:intergenic | 25.0% |
| !!! | ACTGAACATGTATTTTGAAA+CGG | - | chr1_1:12018849-12018868 | None:intergenic | 25.0% |
| !!! | TTTAATTTTCTTGAGGGTTT+TGG | - | chr1_1:12019184-12019203 | None:intergenic | 25.0% |
| !!! | TCTCTTTTCTCTTGTTTTTT+TGG | - | chr1_1:12019228-12019247 | None:intergenic | 25.0% |
| ! | AGGTTCAAAACAAAGAAAAA+AGG | - | chr1_1:12019897-12019916 | None:intergenic | 25.0% |
| ! | TGAGAATGTTAAGAAAAATC+AGG | - | chr1_1:12019993-12020012 | None:intergenic | 25.0% |
| ! | TGAAATTTGTAAGAGAAAAC+CGG | - | chr1_1:12020026-12020045 | None:intergenic | 25.0% |
| ! | GTGATATGTATTTAAAAGCA+AGG | + | chr1_1:12020071-12020090 | Msa0008340:intron | 25.0% |
| !!! | AGTTTGCTAATTTACATGTT+AGG | - | chr1_1:12020160-12020179 | None:intergenic | 25.0% |
| !! | ATCTTTTGCAATCAAATTGA+GGG | - | chr1_1:12020250-12020269 | None:intergenic | 25.0% |
| ! | GAAATAGGTACAATTGATAA+AGG | + | chr1_1:12020285-12020304 | Msa0008340:intron | 25.0% |
| ! | TGATTGGATAACATTTACAT+AGG | - | chr1_1:12021058-12021077 | None:intergenic | 25.0% |
| ! | CAAAGATAGTGTATTAAAAG+AGG | + | chr1_1:12021076-12021095 | Msa0008340:intron | 25.0% |
| ! | ATAATTAAAAGTCGTTAGAG+AGG | - | chr1_1:12021398-12021417 | None:intergenic | 25.0% |
| !! | ATCATAAGAAGTCATGTTTT+AGG | + | chr1_1:12021441-12021460 | Msa0008340:intron | 25.0% |
| !!! | TCACGAGACATTATTTTATT+TGG | - | chr1_1:12021559-12021578 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTAGTTTCGATT+GGG | - | chr1_1:12021662-12021681 | None:intergenic | 25.0% |
| !!! | AAATTTTCGTTAGTTTCGAT+TGG | - | chr1_1:12021663-12021682 | None:intergenic | 25.0% |
| ! | TTAGAAAAGGATTTACATCA+AGG | + | chr1_1:12021916-12021935 | Msa0008340:CDS | 25.0% |
| ! | ATTGAATTAGCAACTTCTTT+AGG | - | chr1_1:12022000-12022019 | None:intergenic | 25.0% |
| ! | TTTAGAACTAGTCAAGGATA+AGG | - | chr1_1:12016515-12016534 | None:intergenic | 30.0% |
| TTGACTCATACAAAACCTAT+AGG | + | chr1_1:12016655-12016674 | Msa0008340:intron | 30.0% | |
| !!! | AAGTATGTTGCACTTTTTTG+AGG | - | chr1_1:12016690-12016709 | None:intergenic | 30.0% |
| CTAAATAGGGAAGAAAAAGT+TGG | - | chr1_1:12016833-12016852 | None:intergenic | 30.0% | |
| ATTTAAGCTTAAAGATGAGG+CGG | - | chr1_1:12016875-12016894 | None:intergenic | 30.0% | |
| TGCATTTAAGCTTAAAGATG+AGG | - | chr1_1:12016878-12016897 | None:intergenic | 30.0% | |
| TATGTATTTAAGAAGTGAGG+AGG | + | chr1_1:12017299-12017318 | Msa0008340:intron | 30.0% | |
| CATGGATATAACCAAACAAT+TGG | - | chr1_1:12017482-12017501 | None:intergenic | 30.0% | |
| AAAAAATCGCAAAATTCGCA+TGG | - | chr1_1:12017500-12017519 | None:intergenic | 30.0% | |
| ATTCTCCTCAATGTCAATTT+GGG | - | chr1_1:12017555-12017574 | None:intergenic | 30.0% | |
| GAACAGTTAGAGTGTAAATA+TGG | - | chr1_1:12018075-12018094 | None:intergenic | 30.0% | |
| AAGGAAAAGATACAAAGACT+GGG | - | chr1_1:12018277-12018296 | None:intergenic | 30.0% | |
| AAAGGAAAAGATACAAAGAC+TGG | - | chr1_1:12018278-12018297 | None:intergenic | 30.0% | |
| ACACCATTTATAGGAATTTG+AGG | - | chr1_1:12018439-12018458 | None:intergenic | 30.0% | |
| ! | TTCACTTACTACCTTTTAGT+TGG | + | chr1_1:12018502-12018521 | Msa0008340:intron | 30.0% |
| TACATTGAGTACGATAAAGA+TGG | - | chr1_1:12018571-12018590 | None:intergenic | 30.0% | |
| AGAATAAGTGGGACAATATT+AGG | - | chr1_1:12018625-12018644 | None:intergenic | 30.0% | |
| TAAGAGACAAAATTCTGCAA+TGG | + | chr1_1:12019027-12019046 | Msa0008340:intron | 30.0% | |
| TTCTGCAATGGTATATGAAA+TGG | + | chr1_1:12019039-12019058 | Msa0008340:intron | 30.0% | |
| ACCCTCAAGAAAATTAAAAG+CGG | + | chr1_1:12019186-12019205 | Msa0008340:intron | 30.0% | |
| !!! | TCCGCTTTTAATTTTCTTGA+GGG | - | chr1_1:12019190-12019209 | None:intergenic | 30.0% |
| !!! | TTCCGCTTTTAATTTTCTTG+AGG | - | chr1_1:12019191-12019210 | None:intergenic | 30.0% |
| AAAAGAGCTAAAAATGCGAA+CGG | + | chr1_1:12019253-12019272 | Msa0008340:intron | 30.0% | |
| !! | TGGGAACAAATATTTCTAGT+CGG | - | chr1_1:12019505-12019524 | None:intergenic | 30.0% |
| GATAAATTTGAGCAGGAATT+GGG | - | chr1_1:12019524-12019543 | None:intergenic | 30.0% | |
| AGAAGATGCTATTAAGTTTG+TGG | - | chr1_1:12019729-12019748 | None:intergenic | 30.0% | |
| TATTATAAGGTCTAGAGAGA+TGG | - | chr1_1:12019768-12019787 | None:intergenic | 30.0% | |
| GTTGTGAATTTAGAAGATTC+AGG | - | chr1_1:12019917-12019936 | None:intergenic | 30.0% | |
| TCTTCTAAATTCACAACTTC+AGG | + | chr1_1:12019920-12019939 | Msa0008340:intron | 30.0% | |
| ACATTCTCATTATGTTCTAC+CGG | + | chr1_1:12020004-12020023 | Msa0008340:intron | 30.0% | |
| ACAAATTTCATAGTAATGCC+CGG | + | chr1_1:12020036-12020055 | Msa0008340:intron | 30.0% | |
| ! | TCTTTTGCAATCAAATTGAG+GGG | - | chr1_1:12020249-12020268 | None:intergenic | 30.0% |
| ! | CATCTTTTGCAATCAAATTG+AGG | - | chr1_1:12020251-12020270 | None:intergenic | 30.0% |
| AGGTACAATTGATAAAGGTT+CGG | + | chr1_1:12020290-12020309 | Msa0008340:intron | 30.0% | |
| AATAGCTCACTTATTAGAGA+AGG | - | chr1_1:12020423-12020442 | None:intergenic | 30.0% | |
| TACCAAATGATGAATTGTTC+CGG | + | chr1_1:12021285-12021304 | Msa0008340:intron | 30.0% | |
| AACGAAAATTTATTGCGGTT+TGG | + | chr1_1:12021672-12021691 | Msa0008340:intron | 30.0% | |
| AACTATATGAATGTTGATGC+AGG | + | chr1_1:12021751-12021770 | Msa0008340:intron | 30.0% | |
| AAAGATATTAAAGGACAACC+AGG | + | chr1_1:12021811-12021830 | Msa0008340:CDS | 30.0% | |
| GCAGCATAATTGTAAAACAT+AGG | - | chr1_1:12021850-12021869 | None:intergenic | 30.0% | |
| !! | AAGAAGAAAAGTGCTACATT+TGG | - | chr1_1:12021898-12021917 | None:intergenic | 30.0% |
| ! | AGCACTTTTCTTCTTAGAAA+AGG | + | chr1_1:12021903-12021922 | Msa0008340:CDS | 30.0% |
| ! | TTTTGCTTCATCATTTGAGT+TGG | - | chr1_1:12021971-12021990 | None:intergenic | 30.0% |
| TGTACTTTGCTTGAAGAAAA+AGG | - | chr1_1:12022024-12022043 | None:intergenic | 30.0% | |
| ! | TTCATTTCTAAAGGAATGGG+AGG | - | chr1_1:12016560-12016579 | None:intergenic | 35.0% |
| ! | TTGAGGTATTTGTCTCCTAT+AGG | - | chr1_1:12016673-12016692 | None:intergenic | 35.0% |
| TTTAAGCTTAAAGATGAGGC+GGG | - | chr1_1:12016874-12016893 | None:intergenic | 35.0% | |
| TCTTCTGAACAATTCGTCTT+TGG | + | chr1_1:12017433-12017452 | Msa0008340:intron | 35.0% | |
| ATCACTTGAACCCAATTGTT+TGG | + | chr1_1:12017468-12017487 | Msa0008340:intron | 35.0% | |
| GATTCTCCTCAATGTCAATT+TGG | - | chr1_1:12017556-12017575 | None:intergenic | 35.0% | |
| TACAAAACTCAAACCCACTT+GGG | - | chr1_1:12017628-12017647 | None:intergenic | 35.0% | |
| TTACAAAACTCAAACCCACT+TGG | - | chr1_1:12017629-12017648 | None:intergenic | 35.0% | |
| TGTTACAAGAAAAACCCGAA+AGG | + | chr1_1:12017887-12017906 | Msa0008340:intron | 35.0% | |
| GTTACAAGAAAAACCCGAAA+GGG | + | chr1_1:12017888-12017907 | Msa0008340:intron | 35.0% | |
| TAGAGTGTAAATATGGCGAA+CGG | - | chr1_1:12018068-12018087 | None:intergenic | 35.0% | |
| TAGATTAGAGTAGATCCACT+TGG | + | chr1_1:12018194-12018213 | Msa0008340:intron | 35.0% | |
| TATCACGATGTATTCTCGTT+TGG | + | chr1_1:12018224-12018243 | Msa0008340:intron | 35.0% | |
| ATCACGATGTATTCTCGTTT+GGG | + | chr1_1:12018225-12018244 | Msa0008340:intron | 35.0% | |
| AGGAAAAGATACAAAGACTG+GGG | - | chr1_1:12018276-12018295 | None:intergenic | 35.0% | |
| ATTCCTATAAATGGTGTGTG+AGG | + | chr1_1:12018442-12018461 | Msa0008340:intron | 35.0% | |
| ATAGAATGAAGATCCTCAAC+TGG | - | chr1_1:12018468-12018487 | None:intergenic | 35.0% | |
| TAACTAGAGCTCCAACTAAA+AGG | - | chr1_1:12018516-12018535 | None:intergenic | 35.0% | |
| TGAAGTACAAACCAAGATGA+AGG | - | chr1_1:12018825-12018844 | None:intergenic | 35.0% | |
| ! | AGAAAAAAGTACAAAGAGCG+AGG | + | chr1_1:12019148-12019167 | Msa0008340:intron | 35.0% |
| ! | GAAAAAAGTACAAAGAGCGA+GGG | + | chr1_1:12019149-12019168 | Msa0008340:intron | 35.0% |
| ! | AAAAAAGTACAAAGAGCGAG+GGG | + | chr1_1:12019150-12019169 | Msa0008340:intron | 35.0% |
| !!! | TCGCATTTTTAGCTCTTTTG+CGG | - | chr1_1:12019252-12019271 | None:intergenic | 35.0% |
| TCTTGCTCTTCTTCTTTCTT+TGG | + | chr1_1:12019322-12019341 | Msa0008340:intron | 35.0% | |
| CTTGCTCTTCTTCTTTCTTT+GGG | + | chr1_1:12019323-12019342 | Msa0008340:intron | 35.0% | |
| AGTGATTCTTGGTCTAACAT+GGG | - | chr1_1:12019382-12019401 | None:intergenic | 35.0% | |
| !!! | TGGACTTTTTGAGTGATTCT+TGG | - | chr1_1:12019393-12019412 | None:intergenic | 35.0% |
| AGTCATGATATGCAAGTTCT+AGG | - | chr1_1:12019445-12019464 | None:intergenic | 35.0% | |
| !! | GGGAACAAATATTTCTAGTC+GGG | - | chr1_1:12019504-12019523 | None:intergenic | 35.0% |
| CGATAAATTTGAGCAGGAAT+TGG | - | chr1_1:12019525-12019544 | None:intergenic | 35.0% | |
| TACTCTCGATAAATTTGAGC+AGG | - | chr1_1:12019531-12019550 | None:intergenic | 35.0% | |
| AGGAAGAGTTTCAACAGAAA+TGG | + | chr1_1:12019691-12019710 | Msa0008340:intron | 35.0% | |
| CAGCAAAATCATTGTAGATG+AGG | - | chr1_1:12019807-12019826 | None:intergenic | 35.0% | |
| AAAAAAGGATGATCCTCAAG+AGG | - | chr1_1:12019882-12019901 | None:intergenic | 35.0% | |
| ATATCACAGTCAAGAAGAAC+CGG | - | chr1_1:12020058-12020077 | None:intergenic | 35.0% | |
| !! | ACATGTTAGGTTTGTTAAGC+AGG | - | chr1_1:12020147-12020166 | None:intergenic | 35.0% |
| !! | TAGCAAACTACGTCTAGTTT+TGG | + | chr1_1:12020171-12020190 | Msa0008340:intron | 35.0% |
| GCACGTGATAACTAAGAAAT+AGG | + | chr1_1:12020270-12020289 | Msa0008340:intron | 35.0% | |
| ACAAGTTCTTCACAATCGTA+AGG | - | chr1_1:12020377-12020396 | None:intergenic | 35.0% | |
| TTCAACGTACTCTCTTTGAT+TGG | + | chr1_1:12020976-12020995 | Msa0008340:intron | 35.0% | |
| ATTTATCCCACCAAATCATG+TGG | + | chr1_1:12021010-12021029 | Msa0008340:intron | 35.0% | |
| TTTATCCCACCAAATCATGT+GGG | + | chr1_1:12021011-12021030 | Msa0008340:intron | 35.0% | |
| TATATACGACCCACATGATT+TGG | - | chr1_1:12021023-12021042 | None:intergenic | 35.0% | |
| ATGTGGGTCGTATATAAGTT+TGG | + | chr1_1:12021027-12021046 | Msa0008340:intron | 35.0% | |
| TACCGGAACAATTCATCATT+TGG | - | chr1_1:12021290-12021309 | None:intergenic | 35.0% | |
| ATTGTTCCGGTACAATTTCT+AGG | + | chr1_1:12021298-12021317 | Msa0008340:intron | 35.0% | |
| TTTCTAGGTGGAACAATTCT+TGG | + | chr1_1:12021313-12021332 | Msa0008340:intron | 35.0% | |
| !! | TGATGATGAGTTGATTGGTT+TGG | - | chr1_1:12021588-12021607 | None:intergenic | 35.0% |
| AAACCAATCAACTCATCATC+AGG | + | chr1_1:12021587-12021606 | Msa0008340:intron | 35.0% | |
| !! | AACTCATCATCAGGTTGATT+TGG | + | chr1_1:12021596-12021615 | Msa0008340:intron | 35.0% |
| !! | ACTCATCATCAGGTTGATTT+GGG | + | chr1_1:12021597-12021616 | Msa0008340:intron | 35.0% |
| ATGCAGGAAAAACAAAGTCA+AGG | + | chr1_1:12021767-12021786 | Msa0008340:intron | 35.0% | |
| TGCAGGAAAAACAAAGTCAA+GGG | + | chr1_1:12021768-12021787 | Msa0008340:intron | 35.0% | |
| ATTAAAGGACAACCAGGAAA+AGG | + | chr1_1:12021817-12021836 | Msa0008340:CDS | 35.0% | |
| ATTAAGCGAGTATCAGACAG+AGG | - | chr1_1:12017041-12017060 | None:intergenic | 40.0% | |
| AAGAAGCTGAGTTCGATTCA+TGG | - | chr1_1:12017417-12017436 | None:intergenic | 40.0% | |
| GTCTACCCAAATTGACATTG+AGG | + | chr1_1:12017547-12017566 | Msa0008340:intron | 40.0% | |
| TTAACCAAACCAGACCCTTT+CGG | - | chr1_1:12017905-12017924 | None:intergenic | 40.0% | |
| AATACGTCAACAGACCCTTT+CGG | - | chr1_1:12017929-12017948 | None:intergenic | 40.0% | |
| !! | GGATTTTGATACCGTGTTGA+CGG | + | chr1_1:12018037-12018056 | Msa0008340:intron | 40.0% |
| TCGTGATATATCAGTCCAAG+TGG | - | chr1_1:12018212-12018231 | None:intergenic | 40.0% | |
| !! | TATTCTCGTTTGGGTTTTCC+TGG | + | chr1_1:12018234-12018253 | Msa0008340:intron | 40.0% |
| !! | ATTCTCGTTTGGGTTTTCCT+GGG | + | chr1_1:12018235-12018254 | Msa0008340:intron | 40.0% |
| GAAAAGATACAAAGACTGGG+GGG | - | chr1_1:12018274-12018293 | None:intergenic | 40.0% | |
| GGAAAAGATACAAAGACTGG+GGG | - | chr1_1:12018275-12018294 | None:intergenic | 40.0% | |
| !!! | GTTTTTGGCATCTGAGTTGA+GGG | - | chr1_1:12018790-12018809 | None:intergenic | 40.0% |
| ! | AGGAGATCAGTGATGGTTTT+TGG | - | chr1_1:12018805-12018824 | None:intergenic | 40.0% |
| AAGATGAAGGAGATCAGTGA+TGG | - | chr1_1:12018812-12018831 | None:intergenic | 40.0% | |
| ATCACTGATCTCCTTCATCT+TGG | + | chr1_1:12018811-12018830 | Msa0008340:intron | 40.0% | |
| TATGATTAGGGTTATGCAGC+AGG | - | chr1_1:12019121-12019140 | None:intergenic | 40.0% | |
| ! | AAAAAGTACAAAGAGCGAGG+GGG | + | chr1_1:12019151-12019170 | Msa0008340:intron | 40.0% |
| !!! | CGCATTTTTAGCTCTTTTGC+GGG | - | chr1_1:12019251-12019270 | None:intergenic | 40.0% |
| ! | TTTGGGACCACAAGTTGAAA+AGG | + | chr1_1:12019340-12019359 | Msa0008340:intron | 40.0% |
| ! | AGACCAACCTTTTCAACTTG+TGG | - | chr1_1:12019350-12019369 | None:intergenic | 40.0% |
| GAGTGATTCTTGGTCTAACA+TGG | - | chr1_1:12019383-12019402 | None:intergenic | 40.0% | |
| TACTGTGGCTCAACAAACTA+TGG | - | chr1_1:12019413-12019432 | None:intergenic | 40.0% | |
| !! | ATAGTTTGTTGAGCCACAGT+AGG | + | chr1_1:12019412-12019431 | Msa0008340:intron | 40.0% |
| ! | GCAGTGACTGATATGGATTA+CGG | - | chr1_1:12019563-12019582 | None:intergenic | 40.0% |
| TTTGCTGATATGCGTATCAC+TGG | - | chr1_1:12019599-12019618 | None:intergenic | 40.0% | |
| CAGCAAAAGAATTGCTCTGT+TGG | + | chr1_1:12019612-12019631 | Msa0008340:intron | 40.0% | |
| ! | CTCTGTCTGAGACACATAAT+GGG | - | chr1_1:12019640-12019659 | None:intergenic | 40.0% |
| TATCACAGTCAAGAAGAACC+GGG | - | chr1_1:12020057-12020076 | None:intergenic | 40.0% | |
| CCGAAAACTCACAAATGGAT+GGG | - | chr1_1:12020202-12020221 | None:intergenic | 40.0% | |
| ! | CCCATCCATTTGTGAGTTTT+CGG | + | chr1_1:12020199-12020218 | Msa0008340:intron | 40.0% |
| ! | CCATCCATTTGTGAGTTTTC+GGG | + | chr1_1:12020200-12020219 | Msa0008340:intron | 40.0% |
| AGTTCCCGAAAACTCACAAA+TGG | - | chr1_1:12020207-12020226 | None:intergenic | 40.0% | |
| !! | TTGTGAGTTTTCGGGAACTA+AGG | + | chr1_1:12020208-12020227 | Msa0008340:intron | 40.0% |
| GCTCACTTATTAGAGAAGGA+AGG | - | chr1_1:12020419-12020438 | None:intergenic | 40.0% | |
| TGGGTCGTATATAAGTTTGG+TGG | + | chr1_1:12021030-12021049 | Msa0008340:intron | 40.0% | |
| GGGTCGTATATAAGTTTGGT+GGG | + | chr1_1:12021031-12021050 | Msa0008340:intron | 40.0% | |
| GTTCCACCTAGAAATTGTAC+CGG | - | chr1_1:12021307-12021326 | None:intergenic | 40.0% | |
| !! | CAACCTGATGATGAGTTGAT+TGG | - | chr1_1:12021593-12021612 | None:intergenic | 40.0% |
| !! | TCAGGTTGATTTGGGTTTGA+CGG | + | chr1_1:12021605-12021624 | Msa0008340:intron | 40.0% |
| GCAGGAAAAACAAAGTCAAG+GGG | + | chr1_1:12021769-12021788 | Msa0008340:intron | 40.0% | |
| ! | ATAGGAAAACCACCTTTTCC+TGG | - | chr1_1:12021832-12021851 | None:intergenic | 40.0% |
| ! | ATGAGGGTATAAGGCACTCA+AGG | + | chr1_1:12016482-12016501 | Msa0008340:intron | 45.0% |
| ! | TGAGGGTATAAGGCACTCAA+GGG | + | chr1_1:12016483-12016502 | Msa0008340:intron | 45.0% |
| AAACTCAAACCCACTTGGGT+TGG | - | chr1_1:12017624-12017643 | None:intergenic | 45.0% | |
| AAGAAAAACCCGAAAGGGTC+TGG | + | chr1_1:12017893-12017912 | Msa0008340:intron | 45.0% | |
| TAACCAAACCAGACCCTTTC+GGG | - | chr1_1:12017904-12017923 | None:intergenic | 45.0% | |
| !! | TCTGGTTTGGTTAACCCGAA+AGG | + | chr1_1:12017911-12017930 | Msa0008340:intron | 45.0% |
| !! | CTGGTTTGGTTAACCCGAAA+GGG | + | chr1_1:12017912-12017931 | Msa0008340:intron | 45.0% |
| ATACGTCAACAGACCCTTTC+GGG | - | chr1_1:12017928-12017947 | None:intergenic | 45.0% | |
| CGTGTAAGAACTCAGATCGA+GGG | - | chr1_1:12017960-12017979 | None:intergenic | 45.0% | |
| ACGTGTAAGAACTCAGATCG+AGG | - | chr1_1:12017961-12017980 | None:intergenic | 45.0% | |
| GCTGTTGTTCAGAGAGTTGT+TGG | + | chr1_1:12018009-12018028 | Msa0008340:intron | 45.0% | |
| TTCAGAGAGTTGTTGGCACT+TGG | + | chr1_1:12018016-12018035 | Msa0008340:intron | 45.0% | |
| TGGCCTCACACACCATTTAT+AGG | - | chr1_1:12018448-12018467 | None:intergenic | 45.0% | |
| TGGACTTCCAGTACATCTCA+GGG | - | chr1_1:12018762-12018781 | None:intergenic | 45.0% | |
| TTGGACTTCCAGTACATCTC+AGG | - | chr1_1:12018763-12018782 | None:intergenic | 45.0% | |
| ! | CATCTGAGTTGAGGGAAGTT+TGG | - | chr1_1:12018782-12018801 | None:intergenic | 45.0% |
| !!! | GGTTTTTGGCATCTGAGTTG+AGG | - | chr1_1:12018791-12018810 | None:intergenic | 45.0% |
| AAGCAAAAGAAGGGATGCAG+AGG | + | chr1_1:12019090-12019109 | Msa0008340:intron | 45.0% | |
| AGCAAAAGAAGGGATGCAGA+GGG | + | chr1_1:12019091-12019110 | Msa0008340:intron | 45.0% | |
| ! | AAAAGTACAAAGAGCGAGGG+GGG | + | chr1_1:12019152-12019171 | Msa0008340:intron | 45.0% |
| TGAAGCGAGCAAAGGTTTCA+AGG | - | chr1_1:12019292-12019311 | None:intergenic | 45.0% | |
| ! | GGACCACAAGTTGAAAAGGT+TGG | + | chr1_1:12019344-12019363 | Msa0008340:intron | 45.0% |
| ! | TCTAGGACTTGTTCCTACTG+TGG | - | chr1_1:12019428-12019447 | None:intergenic | 45.0% |
| ! | GCTCTGTCTGAGACACATAA+TGG | - | chr1_1:12019641-12019660 | None:intergenic | 45.0% |
| ATGTGTCTCAGACAGAGCTA+AGG | + | chr1_1:12019643-12019662 | Msa0008340:intron | 45.0% | |
| TCTTCCTGTGCATATTGTGC+AGG | - | chr1_1:12019678-12019697 | None:intergenic | 45.0% | |
| GATGCTACTGTGCAATCTTC+AGG | - | chr1_1:12019833-12019852 | None:intergenic | 45.0% | |
| CCCGAAAACTCACAAATGGA+TGG | - | chr1_1:12020203-12020222 | None:intergenic | 45.0% | |
| GTTTCTTAACATGTGCCCCA+CGG | + | chr1_1:12020668-12020687 | Msa0008340:intron | 45.0% | |
| TTTCTTAACATGTGCCCCAC+GGG | + | chr1_1:12020669-12020688 | Msa0008340:intron | 45.0% | |
| !! | TAGTGTTAACTTGTGCCCGT+GGG | - | chr1_1:12020687-12020706 | None:intergenic | 45.0% |
| !! | TACGACCCACATGATTTGGT+GGG | - | chr1_1:12021019-12021038 | None:intergenic | 45.0% |
| ! | ATACGACCCACATGATTTGG+TGG | - | chr1_1:12021020-12021039 | None:intergenic | 45.0% |
| ! | GTTCCGGTACAATTTCTAGG+TGG | + | chr1_1:12021301-12021320 | Msa0008340:intron | 45.0% |
| AAAGGACAACCAGGAAAAGG+TGG | + | chr1_1:12021820-12021839 | Msa0008340:CDS | 45.0% | |
| !!! | ATTTTTATTATAACTAATTA+AGG | + | chr1_1:12017240-12017259 | Msa0008340:intron | 5.0% |
| !!! | TTTATTTATATATCTTTTAA+TGG | + | chr1_1:12017733-12017752 | Msa0008340:intron | 5.0% |
| !! | AGAAAATATAATAAATAAAA+AGG | - | chr1_1:12018296-12018315 | None:intergenic | 5.0% |
| !! | TATATATTAGTTAAAAAATA+TGG | - | chr1_1:12018907-12018926 | None:intergenic | 5.0% |
| !! | AAATATAACTTTAATTAATA+GGG | + | chr1_1:12020512-12020531 | Msa0008340:intron | 5.0% |
| !! | TAAATATAGAAATAATTTAT+TGG | + | chr1_1:12020567-12020586 | Msa0008340:intron | 5.0% |
| TTGAGGATGAGCACACTCCA+AGG | + | chr1_1:12017589-12017608 | Msa0008340:intron | 50.0% | |
| TCACACATGCCAACCCAAGT+GGG | + | chr1_1:12017612-12017631 | Msa0008340:intron | 50.0% | |
| AAACCCGAAAGGGTCTGGTT+TGG | + | chr1_1:12017898-12017917 | Msa0008340:intron | 50.0% | |
| !! | GAACGGATTGACCGTCAACA+CGG | - | chr1_1:12018051-12018070 | None:intergenic | 50.0% |
| TACAAAGACTGGGGGGACAT+AGG | - | chr1_1:12018267-12018286 | None:intergenic | 50.0% | |
| GACTTCCAGTACATCTCAGG+GGG | - | chr1_1:12018760-12018779 | None:intergenic | 50.0% | |
| GGACTTCCAGTACATCTCAG+GGG | - | chr1_1:12018761-12018780 | None:intergenic | 50.0% | |
| GCAAAAGAAGGGATGCAGAG+GGG | + | chr1_1:12019092-12019111 | Msa0008340:intron | 50.0% | |
| GCGAGCAAAGGTTTCAAGGT+TGG | - | chr1_1:12019288-12019307 | None:intergenic | 50.0% | |
| GTGTGACGCAGTGACTGATA+TGG | - | chr1_1:12019570-12019589 | None:intergenic | 50.0% | |
| ATATGCGTATCACTGGCCCT+TGG | - | chr1_1:12019592-12019611 | None:intergenic | 50.0% | |
| TCCACCTGCACAATATGCAC+AGG | + | chr1_1:12019671-12019690 | Msa0008340:intron | 50.0% | |
| TCCTGTGCATATTGTGCAGG+TGG | - | chr1_1:12019675-12019694 | None:intergenic | 50.0% | |
| GCTACTGTGCAATCTTCAGG+AGG | - | chr1_1:12019830-12019849 | None:intergenic | 50.0% | |
| TCAAGAGGCTGGACAACATG+AGG | - | chr1_1:12019867-12019886 | None:intergenic | 50.0% | |
| TCATGTTGTCCAGCCTCTTG+AGG | + | chr1_1:12019866-12019885 | Msa0008340:intron | 50.0% | |
| AAGGATGATCCTCAAGAGGC+TGG | - | chr1_1:12019878-12019897 | None:intergenic | 50.0% | |
| !! | AGTGTTAACTTGTGCCCGTG+GGG | - | chr1_1:12020686-12020705 | None:intergenic | 50.0% |
| !! | GTAGTGTTAACTTGTGCCCG+TGG | - | chr1_1:12020688-12020707 | None:intergenic | 50.0% |
| ! | GGTATAAGGCACTCAAGGGC+TGG | + | chr1_1:12016487-12016506 | Msa0008340:intron | 55.0% |
| !! | TGGGTTGGCATGTGTGACCT+TGG | - | chr1_1:12017609-12017628 | None:intergenic | 55.0% |
| GTCACACATGCCAACCCAAG+TGG | + | chr1_1:12017611-12017630 | Msa0008340:intron | 55.0% | |
| ATGGTGTGTGAGGCCAGTTG+AGG | + | chr1_1:12018452-12018471 | Msa0008340:intron | 55.0% | |
| CCAGTACATCTCAGGGGGTA+AGG | - | chr1_1:12018755-12018774 | None:intergenic | 55.0% | |
| CCTTACCCCCTGAGATGTAC+TGG | + | chr1_1:12018752-12018771 | Msa0008340:CDS | 55.0% | |
| ! | CAGCAGTCTGAAGCGAGCAA+AGG | - | chr1_1:12019300-12019319 | None:intergenic | 55.0% |
| TCAGTCACTGCGTCACACCA+AGG | + | chr1_1:12019572-12019591 | Msa0008340:intron | 55.0% | |
| CAGTCACTGCGTCACACCAA+GGG | + | chr1_1:12019573-12019592 | Msa0008340:intron | 55.0% | |
| CTTAGTTTCGCGCCCGTACG+CGG | + | chr1_1:12018129-12018148 | Msa0008340:intron | 60.0% | |
| TTAGTTTCGCGCCCGTACGC+GGG | + | chr1_1:12018130-12018149 | Msa0008340:intron | 60.0% | |
| !! | CGTTTGGGTTTTCCTGGGCC+AGG | + | chr1_1:12018240-12018259 | Msa0008340:intron | 60.0% |
| CTCAGGGGGTAAGGCAGCAT+GGG | - | chr1_1:12018746-12018765 | None:intergenic | 60.0% | |
| TCTCAGGGGGTAAGGCAGCA+TGG | - | chr1_1:12018747-12018766 | None:intergenic | 60.0% | |
| AACCCAGCGAACCCGCGTAC+GGG | - | chr1_1:12018144-12018163 | None:intergenic | 65.0% | |
| CAACCCAGCGAACCCGCGTA+CGG | - | chr1_1:12018145-12018164 | None:intergenic | 65.0% | |
| GACTGGGGGGACATAGGACC+TGG | - | chr1_1:12018261-12018280 | None:intergenic | 65.0% | |
| GGGGACATAGGACCTGGCCC+AGG | - | chr1_1:12018255-12018274 | None:intergenic | 70.0% | |
| CGCCCGTACGCGGGTTCGCT+GGG | + | chr1_1:12018139-12018158 | Msa0008340:intron | 75.0% | |
| ! | GCGCCCGTACGCGGGTTCGC+TGG | + | chr1_1:12018138-12018157 | Msa0008340:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 12016482 | 12022055 | 12016482 | ID=Msa0008340;Name=Msa0008340 |
| chr1_1 | mRNA | 12016482 | 12022055 | 12016482 | ID=Msa0008340-mRNA-1;Parent=Msa0008340;Name=Msa0008340-mRNA-1;_AED=0.49;_eAED=0.59;_QI=0|0|0|0.75|0|0|4|0|98 |
| chr1_1 | exon | 12016482 | 12016487 | 12016482 | ID=Msa0008340-mRNA-1:exon:4556;Parent=Msa0008340-mRNA-1 |
| chr1_1 | exon | 12018740 | 12018776 | 12018740 | ID=Msa0008340-mRNA-1:exon:4557;Parent=Msa0008340-mRNA-1 |
| chr1_1 | exon | 12021773 | 12022005 | 12021773 | ID=Msa0008340-mRNA-1:exon:4558;Parent=Msa0008340-mRNA-1 |
| chr1_1 | exon | 12022035 | 12022055 | 12022035 | ID=Msa0008340-mRNA-1:exon:4559;Parent=Msa0008340-mRNA-1 |
| chr1_1 | CDS | 12016482 | 12016487 | 12016482 | ID=Msa0008340-mRNA-1:cds;Parent=Msa0008340-mRNA-1 |
| chr1_1 | CDS | 12018740 | 12018776 | 12018740 | ID=Msa0008340-mRNA-1:cds;Parent=Msa0008340-mRNA-1 |
| chr1_1 | CDS | 12021773 | 12022005 | 12021773 | ID=Msa0008340-mRNA-1:cds;Parent=Msa0008340-mRNA-1 |
| chr1_1 | CDS | 12022035 | 12022055 | 12022035 | ID=Msa0008340-mRNA-1:cds;Parent=Msa0008340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
