AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0133460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133460 MtrunA17_Chr1g0202891 92.218 257 9 1 3 248 5 261 2.76e-171 474
Msa0133460 MtrunA17_Chr1g0202931 87.500 256 21 1 4 248 6 261 1.09e-159 445
Msa0133460 MtrunA17_Chr1g0202871 79.297 256 42 1 4 248 6 261 1.15e-143 405
Msa0133460 MtrunA17_Chr1g0202861 75.486 257 52 1 3 248 46 302 2.53e-139 395
Msa0133460 MtrunA17_Chr8g0386971 68.235 255 70 1 5 248 7 261 1.61e-123 353
Msa0133460 MtrunA17_Chr6g0470501 67.451 255 69 3 8 248 37 291 8.52e-116 335
Msa0133460 MtrunA17_Chr6g0470321 67.969 256 66 4 8 248 18 272 3.31e-114 330
Msa0133460 MtrunA17_Chr1g0182541 56.299 254 100 1 6 248 13 266 6.98e-99 291
Msa0133460 MtrunA17_Chr7g0262941 54.902 255 103 2 6 248 13 267 3.46e-94 280
Msa0133460 MtrunA17_Chr4g0058731 41.473 258 136 3 6 248 24 281 2.26e-57 186
Msa0133460 MtrunA17_Chr8g0388831 41.860 258 135 4 6 248 13 270 1.01e-56 184
Msa0133460 MtrunA17_Chr3g0117241 42.254 142 68 2 6 133 13 154 1.28e-30 111
Msa0133460 MtrunA17_Chr1g0202911 64.865 74 26 0 31 104 4 77 7.09e-27 99.8
Msa0133460 MtrunA17_Chr6g0481311 34.389 221 118 5 28 228 62 275 1.62e-21 92.4
Msa0133460 MtrunA17_Chr3g0117251 37.931 116 71 1 134 248 1 116 1.48e-18 80.5
Msa0133460 MtrunA17_Chr2g0317921 30.400 250 137 8 29 244 88 334 2.24e-15 75.1
Msa0133460 MtrunA17_Chr6g0466681 26.570 207 132 4 23 218 62 259 7.95e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133460 AT4G23420.5 67.315 257 72 2 5 249 7 263 1.92e-123 352
Msa0133460 AT4G23420.1 67.578 256 71 2 5 248 7 262 7.10e-123 352
Msa0133460 AT4G23420.2 67.578 256 71 2 5 248 7 262 7.10e-123 352
Msa0133460 AT4G23430.2 66.016 256 75 2 5 248 7 262 4.35e-122 350
Msa0133460 AT4G23420.3 67.589 253 70 2 8 248 27 279 1.82e-121 349
Msa0133460 AT4G23420.4 72.294 231 53 1 5 224 7 237 8.09e-121 345
Msa0133460 AT4G23430.1 65.234 256 75 3 5 248 7 260 8.45e-119 342
Msa0133460 AT4G11410.1 65.098 255 78 1 5 248 7 261 3.41e-115 333
Msa0133460 AT4G23430.4 62.500 256 74 3 5 248 7 252 4.26e-112 325
Msa0133460 AT4G11410.2 68.376 234 63 1 5 227 7 240 2.14e-111 321
Msa0133460 AT4G23430.3 61.719 256 74 4 5 248 7 250 1.12e-108 316
Msa0133460 AT2G37540.1 52.896 259 111 1 1 248 7 265 2.11e-96 285
Msa0133460 AT2G37540.2 55.417 240 96 1 1 229 7 246 1.18e-95 281
Msa0133460 AT5G02540.1 55.859 256 102 1 4 248 10 265 1.99e-90 271
Msa0133460 AT4G24050.2 43.077 260 134 3 6 251 13 272 6.87e-64 201
Msa0133460 AT4G24050.1 43.191 257 132 3 6 248 13 269 2.17e-62 199
Msa0133460 AT5G50130.9 44.490 245 122 3 6 236 13 257 1.45e-60 192
Msa0133460 AT5G50130.3 44.715 246 121 4 6 236 13 258 4.22e-60 191
Msa0133460 AT5G50130.2 42.248 258 135 3 6 249 13 270 5.12e-60 192
Msa0133460 AT5G50130.4 42.471 259 134 4 6 249 13 271 1.60e-59 191
Msa0133460 AT5G50130.1 42.636 258 133 4 6 248 13 270 1.61e-59 192
Msa0133460 AT5G50130.8 41.739 230 122 2 31 248 7 236 8.13e-53 174
Msa0133460 AT5G50130.6 41.558 231 123 2 31 249 7 237 9.03e-53 173
Msa0133460 AT5G50130.7 41.991 231 121 3 31 248 7 237 2.40e-52 172
Msa0133460 AT5G50130.5 41.810 232 122 3 31 249 7 238 2.97e-52 172
Msa0133460 AT1G64590.1 41.129 248 132 3 15 248 22 269 2.38e-47 160
Msa0133460 AT5G54190.1 31.325 249 132 10 31 244 96 340 2.70e-21 92.4
Msa0133460 AT4G27760.1 33.054 239 126 8 28 243 58 285 6.65e-21 90.9
Msa0133460 AT5G53090.1 34.685 222 114 6 28 228 57 268 2.30e-20 89.4
Msa0133460 AT1G03630.1 33.466 251 127 11 29 244 91 336 5.46e-18 82.8
Msa0133460 AT1G03630.2 33.466 251 127 11 29 244 89 334 6.07e-18 82.8
Msa0133460 AT4G27440.2 32.530 249 129 11 31 244 92 336 3.84e-17 80.5
Msa0133460 AT4G27440.1 32.530 249 129 11 31 244 92 336 3.84e-17 80.5
Msa0133460 AT5G53100.1 35.371 229 111 10 28 231 45 261 6.09e-17 79.7
Msa0133460 AT4G09750.1 27.103 214 122 6 27 222 43 240 1.59e-13 69.7
Msa0133460 AT5G54190.2 28.251 223 122 9 56 244 1 219 2.80e-13 68.6

Find 165 sgRNAs with CRISPR-Local

Find 1323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCAAGAAAGGGGTTTC+TGG 0.179687 1_3:-64726978 Msa0133460:intron
TCATTCCTTAATTTACTTTC+TGG 0.188746 1_3:+64737427 None:intergenic
CAATGAAAACATAAAGTTTA+AGG 0.192623 1_3:+64737835 None:intergenic
TTCAGGAAGAAAGGGATTTC+TGG 0.209019 1_3:-64736922 Msa0133460:five_prime_UTR
CATTGGAATGCGTTCTTATC+AGG 0.221106 1_3:-64737219 Msa0133460:five_prime_UTR
AGCATAGTGGTTCTTATAAA+AGG 0.221115 1_3:-64737563 Msa0133460:five_prime_UTR
CCTTCCCTGTGATTCTCTTT+TGG 0.235273 1_3:+64733109 None:intergenic
ATGCAGTTCAATGTTGTCTT+TGG 0.245720 1_3:+64725548 None:intergenic
TTTCAGCATGAATTTGATTA+AGG 0.259296 1_3:-64733057 Msa0133460:five_prime_UTR
GGCTTACACATTTGCATATT+CGG 0.280798 1_3:-64734969 Msa0133460:five_prime_UTR
ACAGGAACAAAAGCTCTTAT+TGG 0.282027 1_3:+64737657 None:intergenic
TCAAGCCAGAAAGTAAATTA+AGG 0.283081 1_3:-64737432 Msa0133460:five_prime_UTR
TTACCATCATGTGGCCATTC+AGG 0.289613 1_3:-64736939 Msa0133460:five_prime_UTR
ATTACAAATCCAAAATCTTC+AGG 0.292734 1_3:+64737951 None:intergenic
CACTAATTCCCTTCACTTGT+GGG 0.304068 1_3:+64733159 None:intergenic
GCGTGGTGTCCATGTGATTA+TGG 0.305515 1_3:-64726501 Msa0133460:CDS
GCGTGGTGTCCATGTGATTA+TGG 0.305515 1_3:-64736447 Msa0133460:five_prime_UTR
AGCACTTGCTGTGGCTAATA+TGG 0.317291 1_3:-64737526 Msa0133460:five_prime_UTR
CTATTGGTTATTACCTTGAT+TGG 0.330943 1_3:+64734918 None:intergenic
CACCAATCTTTCCCGCCATA+TGG 0.337645 1_3:-64724838 Msa0133460:CDS
CACCAATCTTTCCCGCCATA+TGG 0.337645 1_3:-64734215 Msa0133460:five_prime_UTR
GATTTGGTTATTACCTTGAT+TGG 0.339925 1_3:+64725196 None:intergenic
TTGTCAAAACGGATTCCTTC+AGG 0.344301 1_3:+64725228 None:intergenic
CTGATTTGGCTAAGAAACTT+TGG 0.344972 1_3:-64733082 Msa0133460:five_prime_UTR
TTGTATACAGTTACAGCAAA+TGG 0.345777 1_3:-64725063 Msa0133460:intron
GATTATGGCTGTTAGAAATA+TGG 0.346372 1_3:-64736432 Msa0133460:five_prime_UTR
ACAGGGAAGGGACGCTGATT+TGG 0.349751 1_3:-64733096 Msa0133460:five_prime_UTR
AAAGGGATTTCTGGATTCTC+AGG 0.351168 1_3:-64736913 Msa0133460:five_prime_UTR
TGACCTGCACAATTACATAT+TGG 0.353740 1_3:+64735082 None:intergenic
TTCCTGTTCTTTATAATTCA+AGG 0.354426 1_3:-64737641 Msa0133460:five_prime_UTR
GAAATACACAAATTTGTATA+TGG 0.359155 1_3:-64737266 Msa0133460:five_prime_UTR
AAAGGGGTTTCTGGATTCTC+AGG 0.371144 1_3:-64726969 Msa0133460:CDS
GATTATGGCTGTTAGAAATA+AGG 0.377539 1_3:-64726486 Msa0133460:CDS
GGAAGAATTGTTAATGTCTC+TGG 0.379542 1_3:-64734995 Msa0133460:five_prime_UTR
GGAGTTAGATCTCAGTTCAT+TGG 0.382633 1_3:-64726399 Msa0133460:CDS
ATGGTTAGCCCTGAAGATTT+TGG 0.385009 1_3:-64737960 Msa0133460:five_prime_UTR
GCATCAGAATTTAATTCCTC+TGG 0.388372 1_3:-64726359 Msa0133460:intron
ACAGGTATAATAAAGGTGAT+TGG 0.389434 1_3:-64724520 Msa0133460:intron
ACCCATATGGCGGGAAAGAT+TGG 0.391956 1_3:+64724836 None:intergenic
ACCCATATGGCGGGAAAGAT+TGG 0.391956 1_3:+64734213 None:intergenic
TGATTTGGCTAAGAAACTTT+GGG 0.394235 1_3:-64733081 Msa0133460:five_prime_UTR
CTCCTTGAATTATAAAGAAC+AGG 0.405168 1_3:+64737639 None:intergenic
ACAGGAGCAACCAGTGGTAT+TGG 0.407904 1_3:-64736497 Msa0133460:intron
CCACTAATTCCCTTCACTTG+TGG 0.410260 1_3:+64733158 None:intergenic
TACAACAAACAGAGTGCATA+TGG 0.418172 1_3:-64734429 Msa0133460:five_prime_UTR
TATTTGAATGATGACATCAT+TGG 0.424697 1_3:-64737137 Msa0133460:five_prime_UTR
AGTAATTAAATAAATTTGAC+AGG 0.425043 1_3:-64737290 Msa0133460:five_prime_UTR
TGGAATATTTGAAGGTGATA+AGG 0.427078 1_3:-64737769 Msa0133460:five_prime_UTR
CAGGTATAATAAAGGTGATT+GGG 0.427139 1_3:-64724519 Msa0133460:CDS
ACAGGTATAATACAGGTGAT+TGG 0.428022 1_3:-64733422 Msa0133460:intron
TACAGCAAATGGGGTGCATA+TGG 0.428773 1_3:-64725052 Msa0133460:CDS
AACCAAGTGTTGTATAAGAA+TGG 0.435424 1_3:-64733023 Msa0133460:five_prime_UTR
ACAGGAGCATCCAGTGGTAT+TGG 0.435914 1_3:-64726551 Msa0133460:intron
CAGGTATAATACAGGTGATT+GGG 0.437343 1_3:-64733421 Msa0133460:five_prime_UTR
AAGTAAATTAAGGAATGATT+AGG 0.437346 1_3:-64737422 Msa0133460:five_prime_UTR
TGTATACAGTTACAGCAAAT+GGG 0.440853 1_3:-64725062 Msa0133460:intron
ACAAAATTAATGACCAATCA+AGG 0.448930 1_3:-64725209 Msa0133460:intron
ACAAAATTAATGACCAATCA+AGG 0.448930 1_3:-64734931 Msa0133460:intron
TTATGCAACAGGTATAATAA+AGG 0.452058 1_3:-64724527 Msa0133460:intron
AGGAATGATTAGGTAGCTAT+AGG 0.452350 1_3:-64737412 Msa0133460:five_prime_UTR
AAAACTCTAGGAAGATAAAC+AGG 0.453140 1_3:+64737468 None:intergenic
GAAATCCCTTTCTTCCTGAA+TGG 0.455018 1_3:+64736925 None:intergenic
TTGAACCATGACTTCTCTGC+TGG 0.457636 1_3:-64737333 Msa0133460:five_prime_UTR
TATCAAAGCAGCAATACTTA+AGG 0.461173 1_3:-64736396 Msa0133460:five_prime_UTR
GAGGCGTCTTGCAAGCTCAT+TGG 0.461840 1_3:+64725000 None:intergenic
GAGGCGTCTTGCAAGCTCAT+TGG 0.461840 1_3:+64734377 None:intergenic
AAGACCAGAGGAGTTGAATT+CGG 0.463073 1_3:+64736301 None:intergenic
TTACATCTTGATCAGGCTGA+TGG 0.465863 1_3:-64724903 Msa0133460:intron
TTACATCTTGATCAGGCTGA+TGG 0.465863 1_3:-64734280 Msa0133460:intron
CCATGTAAAATATATGCTAT+AGG 0.465903 1_3:+64737789 None:intergenic
ATGTGGCCATTCAGCAAGAA+AGG 0.469855 1_3:-64726987 Msa0133460:intron
AGATTGGTGAGAATGATTCC+TGG 0.477751 1_3:+64724852 None:intergenic
AGATTGGTGAGAATGATTCC+TGG 0.477751 1_3:+64734229 None:intergenic
CCACAAGTGAAGGGAATTAG+TGG 0.477838 1_3:-64733158 Msa0133460:five_prime_UTR
ACTCATGGAATTGATGCAAC+TGG 0.480827 1_3:-64736868 Msa0133460:five_prime_UTR
GCATCCGAATTCAACTCCTC+TGG 0.483856 1_3:-64736305 Msa0133460:five_prime_UTR
ACTCATGGAATTGATGCAAC+TGG 0.489575 1_3:-64726924 Msa0133460:CDS
GGAGTTAGATCTCAGTTCAA+TGG 0.492329 1_3:-64736345 Msa0133460:five_prime_UTR
ATGTGGCCATTCAGGAAGAA+AGG 0.492857 1_3:-64736931 Msa0133460:five_prime_UTR
TTGTCTTTGGACAGCATGAA+AGG 0.496194 1_3:+64725561 None:intergenic
ACTATGCTCTTCACCAACCT+TGG 0.496587 1_3:+64737578 None:intergenic
CTCAGCTAAAATAGATGTCA+TGG 0.499752 1_3:-64726420 Msa0133460:CDS
TTACAAATCCAAAATCTTCA+GGG 0.499930 1_3:+64737952 None:intergenic
ACACATATCAGGGAAAGAAA+TGG 0.503609 1_3:-64735128 Msa0133460:five_prime_UTR
TCTTATAAAAGGATTTATGC+TGG 0.505951 1_3:-64737552 Msa0133460:five_prime_UTR
TGTGGCCATTCAGCAAGAAA+GGG 0.508330 1_3:-64726986 Msa0133460:intron
ACCAATCTTTCCCGCCATAT+GGG 0.511754 1_3:-64724837 Msa0133460:CDS
ACCAATCTTTCCCGCCATAT+GGG 0.511754 1_3:-64734214 Msa0133460:five_prime_UTR
GGCCTCACTGCTATTGTCAC+TGG 0.512117 1_3:-64726903 Msa0133460:intron
TACATCTTGATCAGGCTGAT+GGG 0.514593 1_3:-64724902 Msa0133460:intron
TACATCTTGATCAGGCTGAT+GGG 0.514593 1_3:-64734279 Msa0133460:intron
CAGCATGAATTTGATTAAGG+AGG 0.517327 1_3:-64733054 Msa0133460:five_prime_UTR
CTTCCTGAATGGCCACATGA+TGG 0.519739 1_3:+64736936 None:intergenic
TGTGGCCAAAAGAGAATCAC+AGG 0.521249 1_3:-64733114 Msa0133460:five_prime_UTR
GGTCTCACTGCTATTGTCAC+TGG 0.523841 1_3:-64736847 Msa0133460:intron
AAACCAATATGTAATTGTGC+AGG 0.528185 1_3:-64735085 Msa0133460:five_prime_UTR
GCACATGAAAGTAAGAAAGA+AGG 0.529008 1_3:-64725294 Msa0133460:CDS
TACCGTGGATTACACCCATA+TGG 0.529890 1_3:+64734200 None:intergenic
TTCCATTCTTATACAACACT+TGG 0.530603 1_3:+64733021 None:intergenic
TACACATTTGCATATTCGGA+AGG 0.534970 1_3:-64734965 Msa0133460:five_prime_UTR
CTCAGCTAAAATTGACGTCA+TGG 0.538413 1_3:-64736366 Msa0133460:five_prime_UTR
ATTGTGAATTCTCTTCATCC+AGG 0.539076 1_3:-64724870 Msa0133460:CDS
ATTGTGAATTCTCTTCATCC+AGG 0.539076 1_3:-64734247 Msa0133460:five_prime_UTR
TGTGGCCATTCAGGAAGAAA+GGG 0.539455 1_3:-64736930 Msa0133460:five_prime_UTR
TTCAGGGCTAACCATGCCAC+TGG 0.540431 1_3:+64737968 None:intergenic
TTATGCAACAGGTATAATAC+AGG 0.545042 1_3:-64733429 Msa0133460:intron
CGCCATATGGGTGTAATCCA+CGG 0.545789 1_3:-64734202 Msa0133460:intron
AGAGATGAGATTTCCAAGGT+TGG 0.547974 1_3:-64737591 Msa0133460:five_prime_UTR
AAAGTCAATAGTGCAGATCA+TGG 0.548372 1_3:+64736994 None:intergenic
AGCATTGCACCCACAAGTGA+AGG 0.549189 1_3:-64733168 Msa0133460:five_prime_UTR
AATAACCAGCAGAGAAGTCA+TGG 0.550286 1_3:+64737328 None:intergenic
ACTGCTGAACAAGTTACTCA+TGG 0.551436 1_3:-64736883 Msa0133460:five_prime_UTR
CGCCATATGGGTGTACTCGA+CGG 0.553447 1_3:-64724825 Msa0133460:intron
TGTCTTTGGACAGCATGAAA+GGG 0.554321 1_3:+64725562 None:intergenic
GCACACGAAAGTAAGAAAGA+AGG 0.557161 1_3:-64735016 Msa0133460:five_prime_UTR
TACCGTCGAGTACACCCATA+TGG 0.560447 1_3:+64724823 None:intergenic
TACATATTTGCATATCCTGA+AGG 0.560462 1_3:-64725243 Msa0133460:CDS
ACTGCTGAAGAAGTTACTCA+TGG 0.562997 1_3:-64726939 Msa0133460:CDS
CAATGCTACATAGCAGGTTG+TGG 0.563645 1_3:+64733184 None:intergenic
TGAGCTTGCAAGACGCCTCA+AGG 0.566834 1_3:-64724996 Msa0133460:intron
TGAGCTTGCAAGACGCCTCA+AGG 0.566834 1_3:-64734373 Msa0133460:intron
TGTCTTATCAGCCAGTGGCA+TGG 0.570622 1_3:-64737979 None:intergenic
TCTTGATCAGGCTGATGGGG+TGG 0.576337 1_3:-64724898 Msa0133460:intron
TCTTGATCAGGCTGATGGGG+TGG 0.576337 1_3:-64734275 Msa0133460:intron
GTGGATTACACCCATATGGC+GGG 0.577534 1_3:+64734204 None:intergenic
AGTCTCAACTCCAATACCAC+TGG 0.581087 1_3:+64726541 None:intergenic
CAAAAGAGAATCACAGGGAA+GGG 0.585563 1_3:-64733108 Msa0133460:five_prime_UTR
AAGGGGTTTCTGGATTCTCA+GGG 0.585889 1_3:-64726968 Msa0133460:CDS
AAGGGATTTCTGGATTCTCA+GGG 0.585889 1_3:-64736912 Msa0133460:five_prime_UTR
AATATGCATACGTTGTACAT+TGG 0.586433 1_3:-64737236 Msa0133460:five_prime_UTR
GTTTAGAGATGAGATTTCCA+AGG 0.593748 1_3:-64737595 Msa0133460:five_prime_UTR
GTTGTTGTCTTATCAGCCAG+TGG 0.595119 1_3:-64737984 None:intergenic
ATGCGTGTTCTTGCTTTGCG+TGG 0.595996 1_3:-64726518 Msa0133460:CDS
TCTTACATCAAGATGTTCAA+CGG 0.596176 1_3:+64736278 None:intergenic
GTCGAGTACACCCATATGGC+GGG 0.601642 1_3:+64724827 None:intergenic
TGGGTGCAATGCTACATAGC+AGG 0.602362 1_3:+64733178 None:intergenic
AGTCTCAACTCCAATACCAC+TGG 0.604354 1_3:+64736487 None:intergenic
AATTGTTAATGTCTCTGGAG+AGG 0.607553 1_3:-64734990 Msa0133460:five_prime_UTR
ACATCTTGATCAGGCTGATG+GGG 0.610650 1_3:-64724901 Msa0133460:intron
ACATCTTGATCAGGCTGATG+GGG 0.610650 1_3:-64734278 Msa0133460:intron
ATTGACTTTGTGAATTGTGA+CGG 0.611694 1_3:-64736980 Msa0133460:five_prime_UTR
TATCAAAGAAGCAATACTGA+AGG 0.612664 1_3:-64726450 Msa0133460:CDS
TGCTGGAAGAGCACTTGCTG+TGG 0.614632 1_3:-64737535 Msa0133460:five_prime_UTR
CCAAAAGAGAATCACAGGGA+AGG 0.615970 1_3:-64733109 Msa0133460:five_prime_UTR
ATATTTGAAGGTGATAAGGA+AGG 0.616957 1_3:-64737765 Msa0133460:five_prime_UTR
TTCTAACAGCCATAATCACA+TGG 0.621462 1_3:+64726492 None:intergenic
ACGCGTGTTCTTGCTTTGCG+TGG 0.623338 1_3:-64736464 Msa0133460:five_prime_UTR
GCATTGCACCCACAAGTGAA+GGG 0.624705 1_3:-64733167 Msa0133460:five_prime_UTR
GTGGCCATTCAGCAAGAAAG+GGG 0.627372 1_3:-64726985 Msa0133460:intron
CGTGGATTACACCCATATGG+CGG 0.632054 1_3:+64734203 None:intergenic
GTAATTAAATAAATTTGACA+GGG 0.633762 1_3:-64737289 Msa0133460:five_prime_UTR
TTCTAACAGCCATAATCACA+TGG 0.652025 1_3:+64736438 None:intergenic
TAATTAAATAAATTTGACAG+GGG 0.658021 1_3:-64737288 Msa0133460:five_prime_UTR
GTATACAGTTACAGCAAATG+GGG 0.659776 1_3:-64725061 Msa0133460:intron
GATGTTCAACGGAAGACCAG+AGG 0.668187 1_3:+64736289 None:intergenic
AAGGTTGGTGAAGAGCATAG+TGG 0.672560 1_3:-64737576 Msa0133460:five_prime_UTR
CTGTTCTTTATAATTCAAGG+AGG 0.674362 1_3:-64737638 Msa0133460:five_prime_UTR
ATGGTAACAGGAGCATCCAG+TGG 0.683391 1_3:-64726557 Msa0133460:intron
ATATTTCCCACATACCTAGG+TGG 0.684024 1_3:+64725514 None:intergenic
AACATAGTGACATAATAACA+TGG 0.690821 1_3:-64737170 Msa0133460:five_prime_UTR
ATGGTAACAGGAGCAACCAG+TGG 0.692173 1_3:-64736503 Msa0133460:intron
CGTCGAGTACACCCATATGG+CGG 0.693238 1_3:+64724826 None:intergenic
TATGTTGAAGATGAGATGTG+TGG 0.706621 1_3:+64737187 None:intergenic
GACCAGTGACAATAGCAGTG+AGG 0.746778 1_3:+64726901 None:intergenic
GTGGCCAAAAGAGAATCACA+GGG 0.763656 1_3:-64733113 Msa0133460:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTTAAAATAAAAAT+AGG + chr1_3:64736076-64736095 None:intergenic 0.0%
!!! TATTTTTATTTTTATATAAA+GGG + chr1_3:64736525-64736544 None:intergenic 0.0%
!!! TTATTTTTATTTTTATATAA+AGG + chr1_3:64736526-64736545 None:intergenic 0.0%
!!! ATCAATTTTATATATGATTT+AGG + chr1_3:64717465-64717484 None:intergenic 10.0%
!! AGATATTATAACAATTATTA+TGG + chr1_3:64718424-64718443 None:intergenic 10.0%
!! TCAAATAAATAGTAAATAAA+AGG + chr1_3:64718708-64718727 None:intergenic 10.0%
!! TAAAAATAATTGTAAAATGA+TGG + chr1_3:64719129-64719148 None:intergenic 10.0%
!!! TTTTGTATTTTGTTTTTAAA+TGG - chr1_3:64719677-64719696 Msa0133460:intron 10.0%
!!! TAAAAAAATATTTTGCATTT+TGG - chr1_3:64725681-64725700 Msa0133460:intron 10.0%
!! TATAATATTTATGCAATATA+TGG + chr1_3:64726769-64726788 None:intergenic 10.0%
!! CAAAATAAATAGTAAATAAA+AGG + chr1_3:64728826-64728845 None:intergenic 10.0%
!! AACATATAACTTAATTATAT+AGG + chr1_3:64729070-64729089 None:intergenic 10.0%
!! AATAAAATAGTATCTATATA+TGG + chr1_3:64730421-64730440 None:intergenic 10.0%
!! GTTATTTATTGAAATTAATA+TGG + chr1_3:64730917-64730936 None:intergenic 10.0%
!!! TAATGTTTACATTTATTTTT+TGG - chr1_3:64731272-64731291 Msa0133460:intron 10.0%
!!! CATAATGTTTTTTTTTTTAA+AGG + chr1_3:64731578-64731597 None:intergenic 10.0%
!!! TATTTTTTTAATTCATACTT+TGG - chr1_3:64731662-64731681 Msa0133460:intron 10.0%
!!! ATTCAATAATAAATTGATTT+AGG + chr1_3:64732239-64732258 None:intergenic 10.0%
!!! ATAATTTTTCTGTTTTTATT+GGG + chr1_3:64733135-64733154 None:intergenic 10.0%
!! ATTATTATTATTGAAAACAT+CGG - chr1_3:64733183-64733202 Msa0133460:five_prime_UTR 10.0%
!!! ATTTTTATTTGTTTTTTGTT+TGG - chr1_3:64735099-64735118 Msa0133460:five_prime_UTR 10.0%
!!! ATTATTTAAGTTTTTTTTGT+TGG - chr1_3:64735420-64735439 Msa0133460:intron 10.0%
!!! TTTTTTTCAAAAATTAAGAA+AGG + chr1_3:64735717-64735736 None:intergenic 10.0%
!!! TTATTTTGATGATTTGTATA+AGG - chr1_3:64717177-64717196 Msa0133460:intron 15.0%
!! AGTAATTAAATAAATTTGAC+AGG - chr1_3:64717245-64717264 Msa0133460:intron 15.0%
!! GTAATTAAATAAATTTGACA+GGG - chr1_3:64717246-64717265 Msa0133460:intron 15.0%
!! TAATTAAATAAATTTGACAG+GGG - chr1_3:64717247-64717266 Msa0133460:intron 15.0%
!!! ATTTTATATATGATTTAGGT+GGG + chr1_3:64717461-64717480 None:intergenic 15.0%
!!! AATTTTATATATGATTTAGG+TGG + chr1_3:64717462-64717481 None:intergenic 15.0%
!! ATAATCTTGAAGTTAAATTA+TGG + chr1_3:64717906-64717925 None:intergenic 15.0%
!! AAATTATTATATGGATATGA+TGG - chr1_3:64718008-64718027 Msa0133460:intron 15.0%
!! AAAACTTTAAATTAAGTTAG+AGG + chr1_3:64718341-64718360 None:intergenic 15.0%
!!! AATGCAATTTACTTTTTAAA+TGG + chr1_3:64718370-64718389 None:intergenic 15.0%
!! GAAACTTTAAATTAAGTTAA+CGG - chr1_3:64718665-64718684 Msa0133460:intron 15.0%
!!! TTTTTAAATTACAGTTACAA+AGG - chr1_3:64719143-64719162 Msa0133460:intron 15.0%
!!! TTTTAAATTACAGTTACAAA+GGG - chr1_3:64719144-64719163 Msa0133460:intron 15.0%
!!! AAACTTCAATTTTATTTTCT+TGG - chr1_3:64719748-64719767 Msa0133460:intron 15.0%
!!! AACTTCAATTTTATTTTCTT+GGG - chr1_3:64719749-64719768 Msa0133460:intron 15.0%
!! TACGAGTAAATAAATAATTA+CGG + chr1_3:64720551-64720570 None:intergenic 15.0%
!!! TTTATCTGATTATTTTGAAT+TGG - chr1_3:64720846-64720865 Msa0133460:intron 15.0%
!!! TTATCTGATTATTTTGAATT+GGG - chr1_3:64720847-64720866 Msa0133460:intron 15.0%
!! TTGTTATAAACGTTTATTAA+GGG - chr1_3:64721227-64721246 Msa0133460:intron 15.0%
!!! CTTTTAAAAACATCAATATA+TGG + chr1_3:64722325-64722344 None:intergenic 15.0%
!!! TTTTTTTTTCCAATAGTAAA+AGG - chr1_3:64722429-64722448 Msa0133460:intron 15.0%
!! AATTGAATCTAATAAAAGTT+CGG + chr1_3:64722746-64722765 None:intergenic 15.0%
!!! TTTTATTAGATTCAATTAAC+TGG - chr1_3:64722749-64722768 Msa0133460:intron 15.0%
!! AGAAATTGAAATTGAAATTA+GGG + chr1_3:64722881-64722900 None:intergenic 15.0%
!! AATACAATATATATAACCAA+GGG + chr1_3:64723864-64723883 None:intergenic 15.0%
!! TAAAAAAAATACGTCATAAT+TGG + chr1_3:64725467-64725486 None:intergenic 15.0%
!! GTAATATATAAGATTAAACA+CGG + chr1_3:64725490-64725509 None:intergenic 15.0%
!! AAAACAATTAAATTCACAAA+AGG - chr1_3:64725722-64725741 Msa0133460:intron 15.0%
!!! ATAACACTTTGTTTATTTTT+TGG - chr1_3:64726024-64726043 Msa0133460:intron 15.0%
!! ATTTCTCATTTGATAAATTT+AGG - chr1_3:64726073-64726092 Msa0133460:intron 15.0%
!!! TTATTTTGATGATTTGTATA+AGG - chr1_3:64717177-64717196 Msa0133460:intron 15.0%
!!! ATTTTATTTATGATTTACGT+TGG + chr1_3:64727408-64727427 None:intergenic 15.0%
!! AAAAACTACTATTTAACAAA+GGG + chr1_3:64727714-64727733 None:intergenic 15.0%
!! TAAAAACTACTATTTAACAA+AGG + chr1_3:64727715-64727734 None:intergenic 15.0%
!! ATAATCTTGAAGTTAAATTA+TGG + chr1_3:64717906-64717925 None:intergenic 15.0%
!!! AAATTATTTTATGGATATGA+TGG - chr1_3:64727954-64727973 Msa0133460:intron 15.0%
!!! TTTTCTGTTAACATTAAAAA+AGG + chr1_3:64728341-64728360 None:intergenic 15.0%
!!! CTTTAAAAAAATAGATTTTG+AGG + chr1_3:64728758-64728777 None:intergenic 15.0%
!! ACATAATTGATATATGAAAT+AGG - chr1_3:64730623-64730642 Msa0133460:intron 15.0%
!! CATAATTGATATATGAAATA+GGG - chr1_3:64730624-64730643 Msa0133460:intron 15.0%
!! TTTCTAATAAAAAAGATTAG+AGG - chr1_3:64731880-64731899 Msa0133460:intron 15.0%
!! TTCTAATAAAAAAGATTAGA+GGG - chr1_3:64731881-64731900 Msa0133460:intron 15.0%
!!! ATCTTTTTCTTATAAAGTAA+GGG + chr1_3:64732539-64732558 None:intergenic 15.0%
!!! TATCTTTTTCTTATAAAGTA+AGG + chr1_3:64732540-64732559 None:intergenic 15.0%
!! GATAAAAATTAAAGTTGTAT+TGG - chr1_3:64732616-64732635 Msa0133460:intron 15.0%
!! TATTAAACTCACTAAATTAA+TGG - chr1_3:64732758-64732777 Msa0133460:intron 15.0%
!! ATTAAACTCACTAAATTAAT+GGG - chr1_3:64732759-64732778 Msa0133460:intron 15.0%
!!! CATAATTTTTCTGTTTTTAT+TGG + chr1_3:64733136-64733155 None:intergenic 15.0%
!! TTCAAAAATTTCAAATGTAT+CGG - chr1_3:64733323-64733342 Msa0133460:intron 15.0%
!!! TTTTTTCAGCATTTTATATT+AGG - chr1_3:64734192-64734211 Msa0133460:intron 15.0%
!!! TGAAATTTGCTATTTTTTAT+GGG - chr1_3:64734935-64734954 Msa0133460:five_prime_UTR 15.0%
!!! AAAGGTATTAAATACATTAT+CGG + chr1_3:64735199-64735218 None:intergenic 15.0%
!!! ATTTTTTTTAAAGATCTTTG+AGG - chr1_3:64735491-64735510 Msa0133460:intron 15.0%
!!! AAAGAAAAATGGTTATTTTA+CGG + chr1_3:64735588-64735607 None:intergenic 15.0%
!!! TCCTTTCTTTTTTTTTTTTT+TGG - chr1_3:64735683-64735702 Msa0133460:intron 15.0%
!! ACCAAAAAAAAAAAAAAGAA+AGG + chr1_3:64735687-64735706 None:intergenic 15.0%
!! ATAAAAATAGGTTATTATTG+AGG + chr1_3:64736064-64736083 None:intergenic 15.0%
!!! ATGATTTATGAAATTTTGAA+TGG - chr1_3:64736188-64736207 Msa0133460:intron 15.0%
!!! TTTTATATAAAGGGTAAATT+TGG + chr1_3:64736516-64736535 None:intergenic 15.0%
!!! TGATTATTCTGAATAATTTT+CGG - chr1_3:64737176-64737195 Msa0133460:five_prime_UTR 15.0%
!! TAATTGGTTAAATAACAAAA+AGG - chr1_3:64737284-64737303 Msa0133460:five_prime_UTR 15.0%
!! AATTGGTTAAATAACAAAAA+GGG - chr1_3:64737285-64737304 Msa0133460:five_prime_UTR 15.0%
!! CAATGAAAACATAAAGTTTA+AGG + chr1_3:64716703-64716722 None:intergenic 20.0%
!!! CTTAAACTTTATGTTTTCAT+TGG - chr1_3:64716701-64716720 Msa0133460:intron 20.0%
!!! ATTTTACATGGAATATTTGA+AGG - chr1_3:64716758-64716777 Msa0133460:intron 20.0%
!! AAGTAAATTAAGGAATGATT+AGG - chr1_3:64717113-64717132 Msa0133460:intron 20.0%
!! GAAATACACAAATTTGTATA+TGG - chr1_3:64717269-64717288 Msa0133460:intron 20.0%
!! TAAAACTACTATTCAACAAA+GGG + chr1_3:64717770-64717789 None:intergenic 20.0%
!! ATAAAACTACTATTCAACAA+AGG + chr1_3:64717771-64717790 None:intergenic 20.0%
!! CTACATATATTCATACATAA+AGG + chr1_3:64717820-64717839 None:intergenic 20.0%
!! GGCTATGAAAAATTATTATA+TGG - chr1_3:64717999-64718018 Msa0133460:intron 20.0%
!! TTGAACATTGTAAAGATAAA+GGG - chr1_3:64718605-64718624 Msa0133460:intron 20.0%
!! GAATCAAATGAATAAAAACT+CGG + chr1_3:64718992-64719011 None:intergenic 20.0%
!! TCTAATAAAATGAAGAGAAA+AGG - chr1_3:64719052-64719071 Msa0133460:intron 20.0%
!!! ATTTTGTTTTTAAATGGAAG+AGG - chr1_3:64719683-64719702 Msa0133460:intron 20.0%
!!! ATTTTATTTTCTTGGGAAAT+CGG - chr1_3:64719756-64719775 Msa0133460:intron 20.0%
!! ATAGTACTCAATATGTATTT+CGG - chr1_3:64719809-64719828 Msa0133460:intron 20.0%
!! TAAATAATTACGGGTATAAT+AGG + chr1_3:64720541-64720560 None:intergenic 20.0%
!! ACGAGTAAATAAATAATTAC+GGG + chr1_3:64720550-64720569 None:intergenic 20.0%
!!! TAGAAAACAAACACATTTTA+TGG + chr1_3:64720931-64720950 None:intergenic 20.0%
!! GTTGTTATAAACGTTTATTA+AGG - chr1_3:64721226-64721245 Msa0133460:intron 20.0%
!! GTGTTATATTTGATCTAAAA+TGG + chr1_3:64722085-64722104 None:intergenic 20.0%
!! CATTATTCAAAAAGAAAATG+TGG - chr1_3:64722154-64722173 Msa0133460:intron 20.0%
!! ATCAATATATGGTTAGATTT+AGG + chr1_3:64722314-64722333 None:intergenic 20.0%
!! TAAAAGAGAGAAAAGAATAT+TGG - chr1_3:64722339-64722358 Msa0133460:intron 20.0%
!!! AATTGAGTTGTAAATTGTAA+TGG + chr1_3:64722791-64722810 None:intergenic 20.0%
!! CAGAAATTGAAATTGAAATT+AGG + chr1_3:64722882-64722901 None:intergenic 20.0%
!!! TAAGGTACAAATTAGTTTAT+GGG - chr1_3:64723118-64723137 Msa0133460:intron 20.0%
!!! TTTGTTTTGAGTTTTGTTTT+TGG - chr1_3:64723146-64723165 Msa0133460:intron 20.0%
!!! TTGTTTTGAGTTTTGTTTTT+GGG - chr1_3:64723147-64723166 Msa0133460:intron 20.0%
!!! TATGATTGATTTTGGTTTTT+TGG - chr1_3:64723170-64723189 Msa0133460:intron 20.0%
!!! ATGATTGATTTTGGTTTTTT+GGG - chr1_3:64723171-64723190 Msa0133460:intron 20.0%
!!! TTTTGTTTGATTTTTGTTTC+TGG - chr1_3:64723199-64723218 Msa0133460:intron 20.0%
!!! TTTGTTTGATTTTTGTTTCT+GGG - chr1_3:64723200-64723219 Msa0133460:intron 20.0%
!!! AGTAATCTTTACTTTTGATA+TGG - chr1_3:64723549-64723568 Msa0133460:intron 20.0%
!! GAATACAATATATATAACCA+AGG + chr1_3:64723865-64723884 None:intergenic 20.0%
!!! TTTATGATAGAGCATTATTT+CGG - chr1_3:64724119-64724138 Msa0133460:intron 20.0%
!! CATTACTAAGATAACTTATA+TGG - chr1_3:64724271-64724290 Msa0133460:intron 20.0%
!!! TTTTTTTTTCTTCATGTTAC+TGG - chr1_3:64724447-64724466 Msa0133460:intron 20.0%
!! TTTGATCATTCATATGATAT+TGG + chr1_3:64724751-64724770 None:intergenic 20.0%
!!! GTTGATTTTATTGTTACTTA+AGG - chr1_3:64725000-64725019 Msa0133460:CDS 20.0%
!!! ATGTTGATTTTTTTTTGACT+TGG - chr1_3:64725141-64725160 Msa0133460:intron 20.0%
!!! AAATGAATGTCATATTTTTC+AGG - chr1_3:64725255-64725274 Msa0133460:CDS 20.0%
!!! TTTTGTTTTAAAAGCTTGTT+TGG + chr1_3:64725295-64725314 None:intergenic 20.0%
!!! GCATTTTGGATAAAAAAAAA+AGG - chr1_3:64725695-64725714 Msa0133460:intron 20.0%
!! GGATAAAAAAAAATGCATTT+CGG - chr1_3:64725743-64725762 Msa0133460:intron 20.0%
!!! GAGTATTTTAATGTGATATA+TGG - chr1_3:64726977-64726996 Msa0133460:intron 20.0%
!! AACATAGTTACATAATAACA+TGG - chr1_3:64727306-64727325 Msa0133460:intron 20.0%
!!! TTTTATGTTGCAGAATTATT+TGG - chr1_3:64727730-64727749 Msa0133460:intron 20.0%
!!! GAATTTTATGTAAAATCACA+CGG + chr1_3:64727917-64727936 None:intergenic 20.0%
!!! GGCTATGATAAATTATTTTA+TGG - chr1_3:64727945-64727964 Msa0133460:intron 20.0%
!! AAAACTTTAGATTAAGTTAG+AGG + chr1_3:64728288-64728307 None:intergenic 20.0%
!!! GTTAACAGAAAAACTTTTTA+TGG - chr1_3:64728349-64728368 Msa0133460:intron 20.0%
!! TCATTGAACAATATATGATA+AGG + chr1_3:64728480-64728499 None:intergenic 20.0%
!! TCAAAAAAATCCAAAACAAA+CGG + chr1_3:64728628-64728647 None:intergenic 20.0%
!!! ACTTAATTATATAGGTTGAT+TGG + chr1_3:64729062-64729081 None:intergenic 20.0%
!! TGTAAATTATGTAATTGTAC+AGG - chr1_3:64729172-64729191 Msa0133460:intron 20.0%
!! TATCATTCATCTACATTTAT+AGG - chr1_3:64729878-64729897 Msa0133460:intron 20.0%
!!! ATATTTTTCAGACAATAATG+TGG - chr1_3:64730251-64730270 Msa0133460:intron 20.0%
!! ATAAATGATGTATTTGTATC+CGG - chr1_3:64730491-64730510 Msa0133460:intron 20.0%
!!! TTTTTTTTAAAGGCAATATC+TGG + chr1_3:64731568-64731587 None:intergenic 20.0%
!!! ACTTTTTTTACAAGAGTAAA+AGG - chr1_3:64731687-64731706 Msa0133460:intron 20.0%
!!! TAAATTTTTTAAAGAGCATG+AGG + chr1_3:64731940-64731959 None:intergenic 20.0%
!! TTAATCAATCAAATACAAGT+TGG - chr1_3:64732263-64732282 Msa0133460:intron 20.0%
!! CATTCTTCTTAAAAAAAAGT+TGG - chr1_3:64732294-64732313 Msa0133460:intron 20.0%
!!! TAAGGTTAATTAGGAAATTT+TGG + chr1_3:64732412-64732431 None:intergenic 20.0%
!!! AAGTGACACTTATTTTAAAA+CGG + chr1_3:64732448-64732467 None:intergenic 20.0%
!! GAGTTTAATAAAGTGAATTA+GGG + chr1_3:64732748-64732767 None:intergenic 20.0%
!! TGAGTTTAATAAAGTGAATT+AGG + chr1_3:64732749-64732768 None:intergenic 20.0%
!! TGTAAAAAATTCTTCTTTGT+TGG + chr1_3:64732903-64732922 None:intergenic 20.0%
!!! GATATTATGTTAATGACTTT+TGG - chr1_3:64733281-64733300 Msa0133460:intron 20.0%
!!! TTTAATGTTGATTTTGTACA+AGG - chr1_3:64733403-64733422 Msa0133460:five_prime_UTR 20.0%
!!! TTTTATTGAGAAATGATGTA+TGG + chr1_3:64734099-64734118 None:intergenic 20.0%
!! CATGTAAGTAAAGAAAATAT+AGG - chr1_3:64734141-64734160 Msa0133460:intron 20.0%
!! AAGTAAAGAAAATATAGGAA+AGG - chr1_3:64734146-64734165 Msa0133460:intron 20.0%
!! AGAGTAATAAAAAAAAAACC+TGG - chr1_3:64734277-64734296 Msa0133460:intron 20.0%
!!! TCAAATTCATCTTTGAAAAA+GGG - chr1_3:64734433-64734452 Msa0133460:five_prime_UTR 20.0%
!!! AATGATTTAAAGCAAGTTTA+AGG - chr1_3:64734667-64734686 Msa0133460:intron 20.0%
!! TTTGTGACATAATAATAAGA+AGG + chr1_3:64734879-64734898 None:intergenic 20.0%
!! TTCTTATTATTATGTCACAA+AGG - chr1_3:64734878-64734897 Msa0133460:intron 20.0%
!! TCTTATTATTATGTCACAAA+GGG - chr1_3:64734879-64734898 Msa0133460:intron 20.0%
!!! GTGAAATTTGCTATTTTTTA+TGG - chr1_3:64734934-64734953 Msa0133460:five_prime_UTR 20.0%
!!! GAAATTTGCTATTTTTTATG+GGG - chr1_3:64734936-64734955 Msa0133460:five_prime_UTR 20.0%
!! AGCTTATCATTGTAAATTAA+AGG - chr1_3:64735532-64735551 Msa0133460:intron 20.0%
!!! GTAAAATAACCATTTTTCTT+TGG - chr1_3:64735587-64735606 Msa0133460:intron 20.0%
!!! TGTGGTATTTTTTTTTTTTG+TGG - chr1_3:64735613-64735632 Msa0133460:intron 20.0%
!!! CAGTATTAATGGTTATTTTA+CGG + chr1_3:64735643-64735662 None:intergenic 20.0%
!!! ATCGTTTAAAACAGTATTAA+TGG + chr1_3:64735654-64735673 None:intergenic 20.0%
!!! TCTTTTTTTTTTTTTTGGTC+AGG - chr1_3:64735688-64735707 Msa0133460:intron 20.0%
!! ATGTATTTATTACATCGAAA+AGG - chr1_3:64735917-64735936 Msa0133460:intron 20.0%
!!! TAAGAATCATGAATTTTCTA+TGG - chr1_3:64736158-64736177 Msa0133460:intron 20.0%
!!! AATTTTGAATGGATTATGTA+TGG - chr1_3:64736199-64736218 Msa0133460:intron 20.0%
!!! GTTTAAAAGTTGAAGTTTTT+TGG - chr1_3:64736224-64736243 Msa0133460:intron 20.0%
!! TTAATAAATTCAAAACTCCA+TGG - chr1_3:64736280-64736299 Msa0133460:intron 20.0%
!! TAATAAATTCAAAACTCCAT+GGG - chr1_3:64736281-64736300 Msa0133460:intron 20.0%
!! AAAACATATGCAAAAAGTTT+CGG - chr1_3:64736771-64736790 Msa0133460:intron 20.0%
!! AACTTAAAAAAACGAATTTC+CGG + chr1_3:64736820-64736839 None:intergenic 20.0%
!! TAGAATGTTAAAATTGAGAA+TGG - chr1_3:64736883-64736902 Msa0133460:five_prime_UTR 20.0%
!! AGAATGTTAAAATTGAGAAT+GGG - chr1_3:64736884-64736903 Msa0133460:five_prime_UTR 20.0%
!! AAAAAACAATGGAATGATAT+TGG + chr1_3:64737045-64737064 None:intergenic 20.0%
!! AATAACAAAAAGGGTAAAAT+TGG - chr1_3:64737294-64737313 Msa0133460:five_prime_UTR 20.0%
!! TGGAATATTTGAATATTTGT+AGG - chr1_3:64737314-64737333 Msa0133460:five_prime_UTR 20.0%
!! GGAATATTTGAATATTTGTA+GGG - chr1_3:64737315-64737334 Msa0133460:five_prime_UTR 20.0%
!! GAATATTTGAATATTTGTAG+GGG - chr1_3:64737316-64737335 Msa0133460:five_prime_UTR 20.0%
!!! AAGAAAAAAAAGTGTAATAG+AGG + chr1_3:64737422-64737441 None:intergenic 20.0%
!! TTTCTTAATTATTTCCCAAA+AGG - chr1_3:64737474-64737493 Msa0133460:five_prime_UTR 20.0%
!! TTCTTAATTATTTCCCAAAA+GGG - chr1_3:64737475-64737494 Msa0133460:five_prime_UTR 20.0%
!!! GATCTTTATTTATAGTCAAA+CGG + chr1_3:64737523-64737542 None:intergenic 20.0%
! TTACAAATCCAAAATCTTCA+GGG + chr1_3:64716586-64716605 None:intergenic 25.0%
! ATTACAAATCCAAAATCTTC+AGG + chr1_3:64716587-64716606 None:intergenic 25.0%
!! AAATAGGTTGTTCTTTTGAA+GGG + chr1_3:64716661-64716680 None:intergenic 25.0%
!! AAAATAGGTTGTTCTTTTGA+AGG + chr1_3:64716662-64716681 None:intergenic 25.0%
!!! TTGTTTTGTTGAGTGAAAAT+AGG + chr1_3:64716677-64716696 None:intergenic 25.0%
! CCATGTAAAATATATGCTAT+AGG + chr1_3:64716749-64716768 None:intergenic 25.0%
!! CCTATAGCATATATTTTACA+TGG - chr1_3:64716746-64716765 Msa0133460:intron 25.0%
! TTCCTGTTCTTTATAATTCA+AGG - chr1_3:64716894-64716913 Msa0133460:intron 25.0%
! TCTTATAAAAGGATTTATGC+TGG - chr1_3:64716983-64717002 Msa0133460:intron 25.0%
!!! TTTTGGTGCTTTAATTTGTT+TGG - chr1_3:64717034-64717053 Msa0133460:intron 25.0%
!!! TAATACGCTTTAAAAACTCT+AGG + chr1_3:64717082-64717101 None:intergenic 25.0%
! TCATTCCTTAATTTACTTTC+TGG + chr1_3:64717111-64717130 None:intergenic 25.0%
! AACATAGTGACATAATAACA+TGG - chr1_3:64717365-64717384 Msa0133460:intron 25.0%
! TATTTGAATGATGACATCAT+TGG - chr1_3:64717398-64717417 Msa0133460:intron 25.0%
!! TTTTTAACGATCTTTGTAGT+TGG - chr1_3:64717878-64717897 Msa0133460:intron 25.0%
! GTTGAACATTGTAAAGATAA+AGG - chr1_3:64718604-64718623 Msa0133460:intron 25.0%
! GTAAAATGATGGTATTTCAT+TGG + chr1_3:64719118-64719137 None:intergenic 25.0%
!!! GAAACATTACGAGTTTTAAT+TGG - chr1_3:64719177-64719196 Msa0133460:intron 25.0%
!!! TACGAGTTTTAATTGGAATT+TGG - chr1_3:64719184-64719203 Msa0133460:intron 25.0%
! GAATTCATCTTAGAGTTTAA+TGG + chr1_3:64719248-64719267 None:intergenic 25.0%
!! GGTCATTAATTTTGTCAAAA+CGG + chr1_3:64719599-64719618 None:intergenic 25.0%
! ACAAAATTAATGACCAATCA+AGG - chr1_3:64719604-64719623 Msa0133460:intron 25.0%
!! TTGGTATCAAAACTTTTATC+TGG + chr1_3:64719860-64719879 None:intergenic 25.0%
!! ATATCATATTAGCAGGTTTT+TGG + chr1_3:64719879-64719898 None:intergenic 25.0%
!!! AATCGTTTTAACTGTAAACA+TGG + chr1_3:64720015-64720034 None:intergenic 25.0%
!! TTTGTTGTAACTGTATTACA+AGG + chr1_3:64720095-64720114 None:intergenic 25.0%
!!! TTTGTTTTTGTGTGTAAAAC+TGG - chr1_3:64720199-64720218 Msa0133460:intron 25.0%
! TCATTCATCTACATTACTAT+AGG - chr1_3:64720503-64720522 Msa0133460:intron 25.0%
! ACTACAGCATAAAAAAACAT+AGG + chr1_3:64720680-64720699 None:intergenic 25.0%
! AGTAATAATGTATGAATGAG+TGG + chr1_3:64720817-64720836 None:intergenic 25.0%
!! TTATGTTTGATTTATGCAAC+AGG - chr1_3:64721095-64721114 Msa0133460:intron 25.0%
! ACCTATGATTTATAAATGTG+AGG - chr1_3:64721183-64721202 Msa0133460:intron 25.0%
! CCTATGATTTATAAATGTGA+GGG - chr1_3:64721184-64721203 Msa0133460:intron 25.0%
! TCTAATCTGTGTTTCTTTAT+TGG + chr1_3:64721254-64721273 None:intergenic 25.0%
!!! GTATTTTTCAGACAATAATG+TGG - chr1_3:64721403-64721422 Msa0133460:intron 25.0%
! TTTCAGCATGAATTTGATTA+AGG - chr1_3:64721478-64721497 Msa0133460:intron 25.0%
! TAATATAGAAGTGGTAAGAT+GGG + chr1_3:64721683-64721702 None:intergenic 25.0%
! TCAAAAAGAAAATGTGGAAA+TGG - chr1_3:64722160-64722179 Msa0133460:intron 25.0%
! TTGTGATTCTACATGAAATA+TGG - chr1_3:64722243-64722262 Msa0133460:intron 25.0%
! TGTGATTCTACATGAAATAT+GGG - chr1_3:64722244-64722263 Msa0133460:intron 25.0%
! AATATATGGTTAGATTTAGG+AGG + chr1_3:64722311-64722330 None:intergenic 25.0%
!! AACAAAAGTCCTTTTACTAT+TGG + chr1_3:64722441-64722460 None:intergenic 25.0%
!!! AATTTTAATATGGTTCGGTT+CGG + chr1_3:64722660-64722679 None:intergenic 25.0%
!!! CGGTTAATTTTAATATGGTT+CGG + chr1_3:64722665-64722684 None:intergenic 25.0%
!!! TGGTTCGGTTAATTTTAATA+TGG + chr1_3:64722670-64722689 None:intergenic 25.0%
! CTTCAAATAATGGTTCAATT+CGG + chr1_3:64722706-64722725 None:intergenic 25.0%
! ATTGAACCATTATTTGAAGA+TGG - chr1_3:64722707-64722726 Msa0133460:intron 25.0%
! AGTAAACCATCTTCAAATAA+TGG + chr1_3:64722716-64722735 None:intergenic 25.0%
! AATCTAATAAAAGTTCGGTT+CGG + chr1_3:64722741-64722760 None:intergenic 25.0%
! AGTTGTAAATTGTAATGGTT+CGG + chr1_3:64722786-64722805 None:intergenic 25.0%
! TGAAATTAGGGTTTAGAAAA+GGG + chr1_3:64722869-64722888 None:intergenic 25.0%
! TTGAAATTAGGGTTTAGAAA+AGG + chr1_3:64722870-64722889 None:intergenic 25.0%
!! CATAAACTAATTTGTACCTT+AGG + chr1_3:64723119-64723138 None:intergenic 25.0%
!! CTAAGGTACAAATTAGTTTA+TGG - chr1_3:64723117-64723136 Msa0133460:intron 25.0%
!!! TTTTTGGGTATGATTGATTT+TGG - chr1_3:64723162-64723181 Msa0133460:intron 25.0%
! AGAAAATCCAATGTTGTTAT+AGG - chr1_3:64723238-64723257 Msa0133460:intron 25.0%
! TGAATTGTAGAGTATAAGAA+GGG + chr1_3:64723405-64723424 None:intergenic 25.0%
! TCATTAACTAAACTCAACAT+TGG + chr1_3:64723665-64723684 None:intergenic 25.0%
! TTCTTTCATTAAACAAGCTA+AGG - chr1_3:64723882-64723901 Msa0133460:intron 25.0%
! TCTTTCATTAAACAAGCTAA+GGG - chr1_3:64723883-64723902 Msa0133460:intron 25.0%
! AGACACAAAATACAATGAAA+AGG + chr1_3:64724028-64724047 None:intergenic 25.0%
! CTCTATCATAAACCATATAT+CGG + chr1_3:64724111-64724130 None:intergenic 25.0%
!!! TCATGTAATTTTAAGACCAT+AGG - chr1_3:64724562-64724581 Msa0133460:intron 25.0%
! CATAAAATCAGAGATCAATT+TGG - chr1_3:64724799-64724818 Msa0133460:intron 25.0%
! TCCAAAGAAAACTATTACAA+TGG + chr1_3:64724903-64724922 None:intergenic 25.0%
!! TTGTAATAGTTTTCTTTGGA+AGG - chr1_3:64724903-64724922 Msa0133460:intron 25.0%
! CATACTTGCATAAGTTAATA+GGG + chr1_3:64724936-64724955 None:intergenic 25.0%
! TCATACTTGCATAAGTTAAT+AGG + chr1_3:64724937-64724956 None:intergenic 25.0%
!!! GATTTTTTTTTGACTTGGAT+CGG - chr1_3:64725146-64725165 Msa0133460:intron 25.0%
!!! TAGCAGAATTTTTTAACCTT+TGG - chr1_3:64725330-64725349 Msa0133460:CDS 25.0%
!! CAGATTTTTCTATCAACTAA+TGG - chr1_3:64725360-64725379 Msa0133460:intron 25.0%
!!! TCAAAATATTGGTTTTGGTT+CGG - chr1_3:64725767-64725786 Msa0133460:intron 25.0%
! TATTTCACTATTAGTGCAAT+GGG + chr1_3:64726004-64726023 None:intergenic 25.0%
! TTATTTCACTATTAGTGCAA+TGG + chr1_3:64726005-64726024 None:intergenic 25.0%
! ATCAAATGAGAAATGATGTT+TGG + chr1_3:64726067-64726086 None:intergenic 25.0%
!! TTGTGTATTCTCATTTTATC+TGG - chr1_3:64726166-64726185 Msa0133460:intron 25.0%
!! TTTTCATAAACTCTCTCAAT+CGG + chr1_3:64726519-64726538 None:intergenic 25.0%
! TATGCAATATATGGAAGTTA+GGG + chr1_3:64726760-64726779 None:intergenic 25.0%
! TTATGCAATATATGGAAGTT+AGG + chr1_3:64726761-64726780 None:intergenic 25.0%
! TATGAACTTACTACATAACA+AGG - chr1_3:64726787-64726806 Msa0133460:intron 25.0%
!!! CATAACAAGGTTTTAGAAAA+TGG - chr1_3:64726800-64726819 Msa0133460:intron 25.0%
! TTATTACGAATTCAATGTAG+CGG + chr1_3:64726939-64726958 None:intergenic 25.0%
! TTACATAAAATTCTTGCAAC+TGG - chr1_3:64727924-64727943 Msa0133460:intron 25.0%
!! ATTTTATGGATATGATGGTA+TGG - chr1_3:64727959-64727978 Msa0133460:intron 25.0%
! TAAGAATGAAAGTTAGTTGA+AGG - chr1_3:64718589-64718608 Msa0133460:intron 25.0%
! TTGAAGGCTGTAAATATAAA+AGG - chr1_3:64728547-64728566 Msa0133460:intron 25.0%
! TGAAGGCTGTAAATATAAAA+GGG - chr1_3:64728548-64728567 Msa0133460:intron 25.0%
! CGTGTTGAAACTTTAAATTA+AGG - chr1_3:64728600-64728619 Msa0133460:intron 25.0%
! CAAAAAAATCCAAAACAAAC+GGG + chr1_3:64728627-64728646 None:intergenic 25.0%
! CATGATCAAGAAAGATAAAA+TGG + chr1_3:64728911-64728930 None:intergenic 25.0%
! TTCTTTAAATGCTTAAACTG+TGG - chr1_3:64729122-64729141 Msa0133460:intron 25.0%
!! GGTCATTAATTTTGTCAAAA+CGG + chr1_3:64719599-64719618 None:intergenic 25.0%
! ACAAAATTAATGACCAATCA+AGG - chr1_3:64719604-64719623 Msa0133460:intron 25.0%
! TTTGAACTTATGTTACCTAT+TGG + chr1_3:64729364-64729383 None:intergenic 25.0%
!!! TTTGTTTTTGTGTGTAAAAC+TGG - chr1_3:64720199-64720218 Msa0133460:intron 25.0%
!! TGTCATTACTACACATTTTA+TGG + chr1_3:64729950-64729969 None:intergenic 25.0%
!! TTATGTTTGATTTATGCAAC+AGG - chr1_3:64721095-64721114 Msa0133460:intron 25.0%
! TTATGCAACAGGTATAATAA+AGG - chr1_3:64730008-64730027 Msa0133460:intron 25.0%
! AATCAGTTCAAATAAATGTG+AGG - chr1_3:64730075-64730094 Msa0133460:intron 25.0%
! AGGATCAGTTCAAATAAAAT+TGG - chr1_3:64730095-64730114 Msa0133460:intron 25.0%
! TTTCAGCATGAATTTGATTA+AGG - chr1_3:64721478-64721497 Msa0133460:intron 25.0%
! ACCAAATTTCCATAAAACAA+TGG - chr1_3:64730560-64730579 Msa0133460:intron 25.0%
!!! TCCATTGTTTTATGGAAATT+TGG + chr1_3:64730564-64730583 None:intergenic 25.0%
! AATTGATATATGAAATAGGG+TGG - chr1_3:64730627-64730646 Msa0133460:intron 25.0%
!! ATGGTCTTTTCTAAATCAAA+TGG + chr1_3:64730707-64730726 None:intergenic 25.0%
!!! CTATCTTCAATTGATTTTCT+GGG + chr1_3:64730884-64730903 None:intergenic 25.0%
!!! TCTATCTTCAATTGATTTTC+TGG + chr1_3:64730885-64730904 None:intergenic 25.0%
!!! ACTTGTTTTTTTGTTTGTTG+AGG - chr1_3:64731133-64731152 Msa0133460:intron 25.0%
!!! AAGATCCAAAATTTTGATAC+TGG + chr1_3:64731194-64731213 None:intergenic 25.0%
!!! CTGTTATAAGTTTTATGACT+TGG - chr1_3:64731228-64731247 Msa0133460:intron 25.0%
! ATTATGCGTGAAAAGAATAT+TGG - chr1_3:64731592-64731611 Msa0133460:intron 25.0%
! TGTCATGTTAACACAATTAT+CGG - chr1_3:64731994-64732013 Msa0133460:intron 25.0%
!! CCTTGTTGTAATTAATTAGT+AGG + chr1_3:64732159-64732178 None:intergenic 25.0%
! CCTACTAATTAATTACAACA+AGG - chr1_3:64732156-64732175 Msa0133460:intron 25.0%
! AGTTGGATGATATACATAAT+AGG - chr1_3:64732311-64732330 Msa0133460:intron 25.0%
! AGTAGTAGATAAGGTTAATT+AGG + chr1_3:64732421-64732440 None:intergenic 25.0%
! AAAAAATTCTTCTTTGTTGG+TGG + chr1_3:64732900-64732919 None:intergenic 25.0%
!!! TTATTGGGTTGAATTAAGTA+TGG + chr1_3:64733120-64733139 None:intergenic 25.0%
!! ATTATGTTAATGACTTTTGG+TGG - chr1_3:64733284-64733303 Msa0133460:intron 25.0%
! AAACTCAAAATTAATGCAAG+TGG + chr1_3:64733485-64733504 None:intergenic 25.0%
! ATATTCAATTATAGAGCAAG+TGG - chr1_3:64733568-64733587 Msa0133460:intron 25.0%
! ACTACATTCAAAGATAAGAA+AGG - chr1_3:64733987-64734006 Msa0133460:intron 25.0%
! TTTAAGAACACCAAACAAAT+TGG - chr1_3:64734241-64734260 Msa0133460:five_prime_UTR 25.0%
!!! ATGAGAAAGAGTTTTTTTGA+AGG + chr1_3:64734381-64734400 None:intergenic 25.0%
!! CTCAAATTCATCTTTGAAAA+AGG - chr1_3:64734432-64734451 Msa0133460:five_prime_UTR 25.0%
!! GGTTTTCTTTTAACAACATT+TGG - chr1_3:64734454-64734473 Msa0133460:intron 25.0%
!!! GTTGTTTGTTTCTTCTTTTA+AGG + chr1_3:64734503-64734522 None:intergenic 25.0%
! TTGTTTCAACAAATTAAAGG+CGG + chr1_3:64734758-64734777 None:intergenic 25.0%
! ATTAGGATTGAAGATTTGTA+GGG + chr1_3:64734781-64734800 None:intergenic 25.0%
! TATTAGGATTGAAGATTTGT+AGG + chr1_3:64734782-64734801 None:intergenic 25.0%
! TACAAATCTTCAATCCTAAT+AGG - chr1_3:64734781-64734800 Msa0133460:intron 25.0%
! ACATAATAATAAGAAGGAGA+AGG + chr1_3:64734873-64734892 None:intergenic 25.0%
!! AAAATTGAGGTTTTCCAAAA+TGG - chr1_3:64734904-64734923 Msa0133460:intron 25.0%
!! AAATTGAGGTTTTCCAAAAT+GGG - chr1_3:64734905-64734924 Msa0133460:intron 25.0%
!!! ATCACAACCTTTTAAAACAT+TGG - chr1_3:64734963-64734982 Msa0133460:five_prime_UTR 25.0%
!!! TTTTTCGCCAATGTTTTAAA+AGG + chr1_3:64734973-64734992 None:intergenic 25.0%
! AGTCACTGATCAAATATTTA+GGG + chr1_3:64735061-64735080 None:intergenic 25.0%
! AAGTCACTGATCAAATATTT+AGG + chr1_3:64735062-64735081 None:intergenic 25.0%
!!! TTTGTTTTTTGTTTGGTGAA+TGG - chr1_3:64735106-64735125 Msa0133460:five_prime_UTR 25.0%
! AGAACATGACTATATATGAA+AGG + chr1_3:64735217-64735236 None:intergenic 25.0%
!!! AAATAACCATTTTTCTTTGG+TGG - chr1_3:64735590-64735609 Msa0133460:intron 25.0%
!! AAAGTAGAATGCAGATATTT+TGG + chr1_3:64735803-64735822 None:intergenic 25.0%
!!! TCAGGAGGATTTTATTTTTT+TGG - chr1_3:64735826-64735845 Msa0133460:intron 25.0%
!! TGTCTCTATTCAACTTATTT+TGG - chr1_3:64735860-64735879 Msa0133460:intron 25.0%
!! TTTTTACTAGAAAAAGGTAG+GGG + chr1_3:64736574-64736593 None:intergenic 25.0%
!! GTTTTTACTAGAAAAAGGTA+GGG + chr1_3:64736575-64736594 None:intergenic 25.0%
! TCTTAATTGTTCACTATTTG+AGG - chr1_3:64736687-64736706 Msa0133460:intron 25.0%
!! ACTTTTTGCATATGTTTTCT+GGG + chr1_3:64736769-64736788 None:intergenic 25.0%
!! AACTTTTTGCATATGTTTTC+TGG + chr1_3:64736770-64736789 None:intergenic 25.0%
! AAACATATGCAAAAAGTTTC+GGG - chr1_3:64736772-64736791 Msa0133460:intron 25.0%
!! ACATTCTAAGAATACGATTT+CGG + chr1_3:64736871-64736890 None:intergenic 25.0%
!!! TAAAGGTTCCAATCTTTTTT+CGG + chr1_3:64737221-64737240 None:intergenic 25.0%
!! AAAAAAAGTGTAATAGAGGA+TGG + chr1_3:64737418-64737437 None:intergenic 25.0%
! AGAAGATCAGAAGAAAATAA+TGG + chr1_3:64737451-64737470 None:intergenic 25.0%
!!! AAATGTTTCATTTTCTAGTC+AGG - chr1_3:64737562-64737581 Msa0133460:five_prime_UTR 25.0%
! TTGTGCTTATAATCAACATA+AGG - chr1_3:64737684-64737703 Msa0133460:five_prime_UTR 25.0%
! CGCACTTTAAATTAAATATC+GGG + chr1_3:64737853-64737872 None:intergenic 25.0%
! GCGCACTTTAAATTAAATAT+CGG + chr1_3:64737854-64737873 None:intergenic 25.0%
TGGAATATTTGAAGGTGATA+AGG - chr1_3:64716766-64716785 Msa0133460:intron 30.0%
ATATTTGAAGGTGATAAGGA+AGG - chr1_3:64716770-64716789 Msa0133460:intron 30.0%
! TACACCACATGTTTTTCTTT+TGG - chr1_3:64716805-64716824 Msa0133460:intron 30.0%
!! TTTGGCTAGTCAAGTTTTTA+TGG - chr1_3:64716823-64716842 Msa0133460:intron 30.0%
CTCCTTGAATTATAAAGAAC+AGG + chr1_3:64716899-64716918 None:intergenic 30.0%
CTGTTCTTTATAATTCAAGG+AGG - chr1_3:64716897-64716916 Msa0133460:intron 30.0%
AGCATAGTGGTTCTTATAAA+AGG - chr1_3:64716972-64716991 Msa0133460:intron 30.0%
! AAAACTCTAGGAAGATAAAC+AGG + chr1_3:64717070-64717089 None:intergenic 30.0%
TCAAGCCAGAAAGTAAATTA+AGG - chr1_3:64717103-64717122 Msa0133460:intron 30.0%
AATATGCATACGTTGTACAT+TGG - chr1_3:64717299-64717318 Msa0133460:intron 30.0%
! ATTGACTTTGTGAATTGTGA+CGG - chr1_3:64717555-64717574 Msa0133460:intron 30.0%
! GATTTTTCATTACCATCATG+TGG - chr1_3:64717587-64717606 Msa0133460:intron 30.0%
!! AGTTTTATGTTGCAGAGTTA+TGG - chr1_3:64717783-64717802 Msa0133460:intron 30.0%
! GTTTTATGTTGCAGAGTTAT+GGG - chr1_3:64717784-64717803 Msa0133460:intron 30.0%
! TTTTATGTTGCAGAGTTATG+GGG - chr1_3:64717785-64717804 Msa0133460:intron 30.0%
! CTTTTCATCATTTAGACTTG+AGG - chr1_3:64717840-64717859 Msa0133460:intron 30.0%
TTACATCAAATTCTTGCAAC+TGG - chr1_3:64717978-64717997 Msa0133460:intron 30.0%
ATTATATGGATATGATGGCA+TGG - chr1_3:64718013-64718032 Msa0133460:intron 30.0%
GATTATGGCTGTTAGAAATA+TGG - chr1_3:64718103-64718122 Msa0133460:intron 30.0%
TATCAAAGCAGCAATACTTA+AGG - chr1_3:64718139-64718158 Msa0133460:intron 30.0%
TCTTACATCAAGATGTTCAA+CGG + chr1_3:64718260-64718279 None:intergenic 30.0%
GAACATCTTGATGTAAGAAA+AGG - chr1_3:64718262-64718281 Msa0133460:intron 30.0%
! CAGTTTTGCCTAAATAAAGA+TGG + chr1_3:64718308-64718327 None:intergenic 30.0%
CATGATCAAGAAAGATAAAC+TGG + chr1_3:64718791-64718810 None:intergenic 30.0%
TTCTTGATCATGTTCATTCA+AGG - chr1_3:64718799-64718818 Msa0133460:intron 30.0%
!! GGGCAATATGTTTGATTTTA+CGG - chr1_3:64718957-64718976 Msa0133460:intron 30.0%
! TGAATAAAAACTCGGTTTGT+TGG + chr1_3:64718984-64719003 None:intergenic 30.0%
TAAAACTCGTAATGTTTCCA+TGG + chr1_3:64719175-64719194 None:intergenic 30.0%
! TCTAAGATGAATTCCTATGT+GGG - chr1_3:64719254-64719273 Msa0133460:intron 30.0%
CTTGATCATTTAGATCAGAA+AGG + chr1_3:64719302-64719321 None:intergenic 30.0%
GATCTAAATGATCAAGAACT+CGG - chr1_3:64719306-64719325 Msa0133460:intron 30.0%
AAACCAATATGTAATTGTGC+AGG - chr1_3:64719450-64719469 Msa0133460:intron 30.0%
! TCTCTTGACAAATCTTTTGT+TGG - chr1_3:64719479-64719498 Msa0133460:intron 30.0%
! CTATTGGTTATTACCTTGAT+TGG + chr1_3:64719620-64719639 None:intergenic 30.0%
CAATCAAGGTAATAACCAAT+AGG - chr1_3:64719618-64719637 Msa0133460:intron 30.0%
TTTGAACATAGGTTACCTAT+TGG + chr1_3:64719636-64719655 None:intergenic 30.0%
ATACAAAATAACAGCACATC+TGG + chr1_3:64719665-64719684 None:intergenic 30.0%
CTAATATGATATCGATCACA+TGG - chr1_3:64719887-64719906 Msa0133460:intron 30.0%
AAAAATTAAGAGCGGACATA+TGG - chr1_3:64720054-64720073 Msa0133460:intron 30.0%
! ATTTAGAATGCCATGTCATA+GGG + chr1_3:64720416-64720435 None:intergenic 30.0%
! TATTTAGAATGCCATGTCAT+AGG + chr1_3:64720417-64720436 None:intergenic 30.0%
TAGTAAATTACCTTCATCCA+TGG + chr1_3:64720591-64720610 None:intergenic 30.0%
!!! TGTTTTTTTATGCTGTAGTG+TGG - chr1_3:64720681-64720700 Msa0133460:intron 30.0%
GTTGTACATTATAGATGAGT+TGG + chr1_3:64720742-64720761 None:intergenic 30.0%
GTACAACAAGAAAATCATTC+AGG - chr1_3:64720755-64720774 Msa0133460:intron 30.0%
!!! TCTGATTATTTTGAATTGGG+TGG - chr1_3:64720850-64720869 Msa0133460:intron 30.0%
TTATGCAACAGGTATAATAC+AGG - chr1_3:64721106-64721125 Msa0133460:intron 30.0%
CCCTCACATTTATAAATCAT+AGG + chr1_3:64721187-64721206 None:intergenic 30.0%
ACTTTCTCCTATCTAAATGT+AGG - chr1_3:64721322-64721341 Msa0133460:intron 30.0%
CTTTCTCCTATCTAAATGTA+GGG - chr1_3:64721323-64721342 Msa0133460:intron 30.0%
TTTCTCCTATCTAAATGTAG+GGG - chr1_3:64721324-64721343 Msa0133460:intron 30.0%
! TGATTTGGCTAAGAAACTTT+GGG - chr1_3:64721454-64721473 Msa0133460:intron 30.0%
! AACCAAGTGTTGTATAAGAA+TGG - chr1_3:64721512-64721531 Msa0133460:intron 30.0%
TTCCATTCTTATACAACACT+TGG + chr1_3:64721517-64721536 None:intergenic 30.0%
!!! AGCACTGCTCATTTTTTTTT+GGG + chr1_3:64721575-64721594 None:intergenic 30.0%
!!! TAGCACTGCTCATTTTTTTT+TGG + chr1_3:64721576-64721595 None:intergenic 30.0%
AATATAGAAGTGGTAAGATG+GGG + chr1_3:64721682-64721701 None:intergenic 30.0%
GTAATATAGAAGTGGTAAGA+TGG + chr1_3:64721684-64721703 None:intergenic 30.0%
TATGTTGTGGTAGAAACAAA+TGG + chr1_3:64721857-64721876 None:intergenic 30.0%
GAATCACAACAATTATGTTG+TGG + chr1_3:64721870-64721889 None:intergenic 30.0%
AATGACAAAGACAATCATGA+CGG + chr1_3:64721944-64721963 None:intergenic 30.0%
! TTGTCTTTGTCATTTCAGTT+AGG - chr1_3:64721950-64721969 Msa0133460:intron 30.0%
CTATGTGAAATGCATGTAAT+TGG - chr1_3:64722199-64722218 Msa0133460:intron 30.0%
! GGACTTTTGTTAAACAGAAA+AGG - chr1_3:64722450-64722469 Msa0133460:intron 30.0%
AACCAAAAACAAATCTGAAC+CGG - chr1_3:64722630-64722649 Msa0133460:intron 30.0%
!! TAAATTGTAATGGTTCGGTT+CGG + chr1_3:64722781-64722800 None:intergenic 30.0%
CTGAATTGTAGAGTATAAGA+AGG + chr1_3:64723406-64723425 None:intergenic 30.0%
!! TTTTTGATGTGTTTCTGTTG+CGG - chr1_3:64723620-64723639 Msa0133460:intron 30.0%
TTCACTTAATCATAAGCATC+AGG + chr1_3:64723773-64723792 None:intergenic 30.0%
AGTTTCTACCATATGATGAT+AGG - chr1_3:64723836-64723855 Msa0133460:intron 30.0%
!! TGTGTGGTATTGATTTGTAT+GGG - chr1_3:64723993-64724012 Msa0133460:intron 30.0%
ATAAACCATATATCGGAGAA+AGG + chr1_3:64724104-64724123 None:intergenic 30.0%
! TGTGTGAATATTTTGTGTGA+TGG - chr1_3:64724227-64724246 Msa0133460:intron 30.0%
TCACAAAGAGAAAGTGAATT+TGG - chr1_3:64724382-64724401 Msa0133460:intron 30.0%
CTATTGAATTGTTTCAGCAA+TGG - chr1_3:64724488-64724507 Msa0133460:intron 30.0%
GATAATCTCATTGTTAGTCA+TGG + chr1_3:64724522-64724541 None:intergenic 30.0%
AATGAGATTATCCTAGTTGA+TGG - chr1_3:64724530-64724549 Msa0133460:intron 30.0%
GATATAGAGACTCATTTATC+AGG - chr1_3:64724615-64724634 Msa0133460:intron 30.0%
AGACATGAATTGAAGTGAAT+TGG + chr1_3:64724713-64724732 None:intergenic 30.0%
!!! TTCATGTCTTTTTGTTTTGC+AGG - chr1_3:64724724-64724743 Msa0133460:intron 30.0%
!!! TCATGTCTTTTTGTTTTGCA+GGG - chr1_3:64724725-64724744 Msa0133460:intron 30.0%
! GCCATTGTAATAGTTTTCTT+TGG - chr1_3:64724899-64724918 Msa0133460:intron 30.0%
TGATGTATTGAGAGTAACTA+AGG - chr1_3:64724954-64724973 Msa0133460:intron 30.0%
AAAGAGGATTTGAACTTTGA+AGG - chr1_3:64725229-64725248 Msa0133460:CDS 30.0%
! GTTGATAGAAAAATCTGCTA+AGG + chr1_3:64725357-64725376 None:intergenic 30.0%
TGCATTTCGGTTCAAAATAT+TGG - chr1_3:64725756-64725775 Msa0133460:intron 30.0%
!!! TCGGTTCAAAATATTGGTTT+TGG - chr1_3:64725762-64725781 Msa0133460:intron 30.0%
TCGGTTAATAGGTAAGAAAA+CGG - chr1_3:64725796-64725815 Msa0133460:intron 30.0%
!!! ACCGAAATTTTGAAATGGTT+CGG + chr1_3:64725889-64725908 None:intergenic 30.0%
ACCATTTCAAAATTTCGGTT+CGG - chr1_3:64725890-64725909 Msa0133460:intron 30.0%
ATGAGAAATGATGTTTGGTA+CGG + chr1_3:64726062-64726081 None:intergenic 30.0%
! AGGAGTTTCTTGATTTTTCA+TGG - chr1_3:64726264-64726283 Msa0133460:intron 30.0%
! ATTAGCAATATAGAGTTGGT+AGG + chr1_3:64726438-64726457 None:intergenic 30.0%
GTCTATTAGCAATATAGAGT+TGG + chr1_3:64726442-64726461 None:intergenic 30.0%
ATATAATCCAATCCAAACGA+TGG + chr1_3:64726464-64726483 None:intergenic 30.0%
GATTATATGAGTTTATCTGC+TGG - chr1_3:64726476-64726495 Msa0133460:CDS 30.0%
ATAAACCTTTATGCTGTATG+TGG - chr1_3:64726691-64726710 Msa0133460:intron 30.0%
ATTAACCACATACAGCATAA+AGG + chr1_3:64726699-64726718 None:intergenic 30.0%
GCATGAAATCATTAAGGATT+TGG + chr1_3:64726734-64726753 None:intergenic 30.0%
!!! GACAATTTTTTTTGCCATTG+CGG + chr1_3:64726845-64726864 None:intergenic 30.0%
AATGTGATATATGGACATTG+TGG - chr1_3:64726986-64727005 Msa0133460:intron 30.0%
TATATGGACATTGTGGTAAT+AGG - chr1_3:64726993-64727012 Msa0133460:intron 30.0%
ATTTCTCACCCATAATCATA+TGG + chr1_3:64727073-64727092 None:intergenic 30.0%
ATGATTATGGGTGAGAAATA+TGG - chr1_3:64727074-64727093 Msa0133460:intron 30.0%
TGTCAAAGAAACAATACTCA+AGG - chr1_3:64727110-64727129 Msa0133460:intron 30.0%
AATAACCAGCATAAACATCA+TGG + chr1_3:64727245-64727264 None:intergenic 30.0%
TATTTGAATGATGACATCAG+TGG - chr1_3:64727339-64727358 Msa0133460:intron 30.0%
ATTTGAATGATGACATCAGT+GGG - chr1_3:64727340-64727359 Msa0133460:intron 30.0%
ATTGACATTGTGAATTGTGA+CGG - chr1_3:64727502-64727521 Msa0133460:intron 30.0%
GAGTTTCTATTATCATCATG+TGG - chr1_3:64727531-64727550 Msa0133460:intron 30.0%
GATTATGGCTGTTAGAAATA+AGG - chr1_3:64718103-64718122 Msa0133460:intron 30.0%
TATCAAAGAAGCAATACTGA+AGG - chr1_3:64728085-64728104 Msa0133460:intron 30.0%
!!! ATGACATCTATTTTAGCTGA+GGG + chr1_3:64728116-64728135 None:intergenic 30.0%
TCTTACATCAAGATGTTCAA+TGG + chr1_3:64718260-64718279 None:intergenic 30.0%
GAACATCTTGATGTAAGAAA+AGG - chr1_3:64718262-64718281 Msa0133460:intron 30.0%
TATAAAAGGGTAACTTGACA+CGG - chr1_3:64728561-64728580 Msa0133460:intron 30.0%
!!! GGGAAATATGTTTGGTTTTA+AGG - chr1_3:64729035-64729054 Msa0133460:intron 30.0%
! TCTCTTGACAAATCTTTTGT+TGG - chr1_3:64719479-64719498 Msa0133460:intron 30.0%
! TGCAAATATGTAAGCTTTTG+CGG + chr1_3:64729284-64729303 None:intergenic 30.0%
TACATATTTGCATATCCTGA+AGG - chr1_3:64729292-64729311 Msa0133460:intron 30.0%
! GATTTGGTTATTACCTTGAT+TGG + chr1_3:64729342-64729361 None:intergenic 30.0%
AGGTAATAACCAAATCCAAT+AGG - chr1_3:64729346-64729365 Msa0133460:intron 30.0%
CTTATGTTACCTATTGGATT+TGG + chr1_3:64729358-64729377 None:intergenic 30.0%
CTTAATTCTTCATGCAACTA+AGG + chr1_3:64729422-64729441 None:intergenic 30.0%
ATGAAGAATTAAGAGTGGAA+AGG - chr1_3:64729429-64729448 Msa0133460:intron 30.0%
!! ATTTGCTGTAACTGTATACA+AGG + chr1_3:64729473-64729492 None:intergenic 30.0%
TTGTATACAGTTACAGCAAA+TGG - chr1_3:64729472-64729491 Msa0133460:intron 30.0%
TGTATACAGTTACAGCAAAT+GGG - chr1_3:64729473-64729492 Msa0133460:intron 30.0%
! ATTTAGAATGTCATGTCACA+GGG + chr1_3:64729793-64729812 None:intergenic 30.0%
CATTATCTACCAATGTTATG+TGG - chr1_3:64729825-64729844 Msa0133460:intron 30.0%
! ATGACAGTATCTGAGTTTTA+TGG - chr1_3:64729964-64729983 Msa0133460:intron 30.0%
ACAGGTATAATAAAGGTGAT+TGG - chr1_3:64730015-64730034 Msa0133460:intron 30.0%
CAGGTATAATAAAGGTGATT+GGG - chr1_3:64730016-64730035 Msa0133460:intron 30.0%
ACTTTCTCCTATCTAAATGT+AGG - chr1_3:64721322-64721341 Msa0133460:intron 30.0%
CTTTCTCCTATCTAAATGTA+GGG - chr1_3:64721323-64721342 Msa0133460:intron 30.0%
TTTCTCCTATCTAAATGTAG+GGG - chr1_3:64721324-64721343 Msa0133460:intron 30.0%
! TGATTTGGCTAAGAAACTTT+GGG - chr1_3:64721454-64721473 Msa0133460:intron 30.0%
ACCAAAGAGAAATGTTATGT+TGG - chr1_3:64730361-64730380 Msa0133460:intron 30.0%
TCCAACATAACATTTCTCTT+TGG + chr1_3:64730365-64730384 None:intergenic 30.0%
!!! GTTATGTTGGACAACTTTTT+TGG - chr1_3:64730374-64730393 Msa0133460:intron 30.0%
ATCTATATATGGTACACACA+CGG + chr1_3:64730410-64730429 None:intergenic 30.0%
ATCAACAACTATTTGACAAC+CGG + chr1_3:64730513-64730532 None:intergenic 30.0%
!! ATGTCACTTCCATTGTTTTA+TGG + chr1_3:64730572-64730591 None:intergenic 30.0%
AAAACATGAAAGAGAGATAG+TGG + chr1_3:64730784-64730803 None:intergenic 30.0%
ATTGACCAAAAATTTCCTGA+CGG - chr1_3:64731034-64731053 Msa0133460:intron 30.0%
! CAACACCAGTATCAAAATTT+TGG - chr1_3:64731186-64731205 Msa0133460:intron 30.0%
ATGGTCTTCTTTAGATCAAA+TGG - chr1_3:64731444-64731463 Msa0133460:intron 30.0%
GTAAAAATCTAATTGACCCA+TGG - chr1_3:64731466-64731485 Msa0133460:intron 30.0%
TTAAACTCCACCATGAAATA+GGG - chr1_3:64731514-64731533 Msa0133460:intron 30.0%
AATATCTGGTTAGATTTAGG+AGG + chr1_3:64731554-64731573 None:intergenic 30.0%
!!! CTACTTGCATTTTTTGTGTT+TGG + chr1_3:64731739-64731758 None:intergenic 30.0%
!!! TATGCAGTTTTTTTTTCCTG+AGG + chr1_3:64731788-64731807 None:intergenic 30.0%
CAGGAAAAAAAAACTGCATA+AGG - chr1_3:64731788-64731807 Msa0133460:intron 30.0%
ACATTAACCAACTGACAATA+AGG + chr1_3:64731824-64731843 None:intergenic 30.0%
TGTTGTTCAATCATTGCTAA+CGG - chr1_3:64731968-64731987 Msa0133460:intron 30.0%
! GGTTAATTAGGAAATTTTGG+TGG + chr1_3:64732409-64732428 None:intergenic 30.0%
!!! GACACTTATTTTAAAACGGA+GGG + chr1_3:64732444-64732463 None:intergenic 30.0%
!!! TGACACTTATTTTAAAACGG+AGG + chr1_3:64732445-64732464 None:intergenic 30.0%
TTTCTTAATCTGTGTGCAAT+AGG + chr1_3:64732474-64732493 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - chr1_3:64732578-64732597 Msa0133460:intron 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG + chr1_3:64732681-64732700 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr1_3:64732682-64732701 Msa0133460:intron 30.0%
! AGTGAATTAGGGAATTTTTG+TGG + chr1_3:64732737-64732756 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr1_3:64732856-64732875 Msa0133460:intron 30.0%
ATAGCCAATTTGATCTTGAT+CGG + chr1_3:64733007-64733026 None:intergenic 30.0%
!! TCTCTTTTTCATGACTTTGA+TGG + chr1_3:64733946-64733965 None:intergenic 30.0%
! TCAGCATTTTATATTAGGAC+TGG - chr1_3:64734197-64734216 Msa0133460:intron 30.0%
! ATGATCATCTCCAATTTGTT+TGG + chr1_3:64734254-64734273 None:intergenic 30.0%
AAAAAAAACCTGGTATGATG+AGG - chr1_3:64734287-64734306 Msa0133460:intron 30.0%
TGCTTAAGGATTTCATCTTT+GGG + chr1_3:64734322-64734341 None:intergenic 30.0%
TTGCTTAAGGATTTCATCTT+TGG + chr1_3:64734323-64734342 None:intergenic 30.0%
! GAATCGAAAAAGTTTGCTTA+AGG + chr1_3:64734336-64734355 None:intergenic 30.0%
! TCAAAGATGAATTTGAGATC+CGG + chr1_3:64734429-64734448 None:intergenic 30.0%
!! ATGAGCTTTAAACAACATGT+TGG - chr1_3:64734579-64734598 Msa0133460:intron 30.0%
ACATATTGAGATGGTTATCA+TGG + chr1_3:64734734-64734753 None:intergenic 30.0%
! GGGTTGTTTCAACAAATTAA+AGG + chr1_3:64734761-64734780 None:intergenic 30.0%
! AATTGAGGTTTTCCAAAATG+GGG - chr1_3:64734906-64734925 Msa0133460:intron 30.0%
AAGCATCTAGACAAAATTCA+AGG + chr1_3:64735247-64735266 None:intergenic 30.0%
! TTGAATTTTGTCTAGATGCT+TGG - chr1_3:64735246-64735265 Msa0133460:intron 30.0%
ATTGAGATCAAATCATCTCA+TGG - chr1_3:64735556-64735575 Msa0133460:intron 30.0%
TTGAGATCAAATCATCTCAT+GGG - chr1_3:64735557-64735576 Msa0133460:intron 30.0%
! ATTATTGAGGATTTTACCCA+CGG + chr1_3:64736051-64736070 None:intergenic 30.0%
! GTTTTATGATGTGAATGAAG+TGG + chr1_3:64736126-64736145 None:intergenic 30.0%
! GTAGTTTGTGTCTAATGTAA+GGG + chr1_3:64736494-64736513 None:intergenic 30.0%
! GGTTTTTACTAGAAAAAGGT+AGG + chr1_3:64736576-64736595 None:intergenic 30.0%
! CGAAGGTTTTTACTAGAAAA+AGG + chr1_3:64736580-64736599 None:intergenic 30.0%
AGCAATCTGTAATTGATGTT+TGG + chr1_3:64736641-64736660 None:intergenic 30.0%
! TCACTATTTGAGGATTTTTC+TGG - chr1_3:64736697-64736716 Msa0133460:intron 30.0%
! CACTATTTGAGGATTTTTCT+GGG - chr1_3:64736698-64736717 Msa0133460:intron 30.0%
TTCTCTGTCAAAATTGAGAA+TGG - chr1_3:64736935-64736954 Msa0133460:five_prime_UTR 30.0%
TCTCTGTCAAAATTGAGAAT+GGG - chr1_3:64736936-64736955 Msa0133460:five_prime_UTR 30.0%
!!! TCATTCCATTGTTTTTTGCT+TGG - chr1_3:64737048-64737067 Msa0133460:five_prime_UTR 30.0%
TAATAATCCAAACTCTCAGA+TGG + chr1_3:64737142-64737161 None:intergenic 30.0%
TCTGAGAGTTTGGATTATTA+CGG - chr1_3:64737142-64737161 Msa0133460:five_prime_UTR 30.0%
TGAGTATTCCGAAAAAAGAT+TGG - chr1_3:64737210-64737229 Msa0133460:five_prime_UTR 30.0%
AAGATTGGAACCTTTATATC+AGG - chr1_3:64737225-64737244 Msa0133460:five_prime_UTR 30.0%
TACACATTAATTTCCCCATT+CGG + chr1_3:64737266-64737285 None:intergenic 30.0%
TGGGGAAATTAATGTGTAAT+TGG - chr1_3:64737268-64737287 Msa0133460:five_prime_UTR 30.0%
GAAGTGAAAAGTCATTAACA+GGG + chr1_3:64737603-64737622 None:intergenic 30.0%
TCAACATAAGGATTAATGTG+AGG - chr1_3:64737696-64737715 Msa0133460:five_prime_UTR 30.0%
! CTTTTTGTCAAAATGAGTTG+TGG + chr1_3:64737757-64737776 None:intergenic 30.0%
! TAAATTAAATATCGGGCTAG+CGG + chr1_3:64737846-64737865 None:intergenic 30.0%
CCACTGATGTTTAAAGAAAA+GGG + chr1_3:64737903-64737922 None:intergenic 30.0%
TCCACTGATGTTTAAAGAAA+AGG + chr1_3:64737904-64737923 None:intergenic 30.0%
! GTTTTCATTGGAGCAATCAT+TGG - chr1_3:64716713-64716732 Msa0133460:intron 35.0%
CTAGCCAAAAGAAAAACATG+TGG + chr1_3:64716812-64716831 None:intergenic 35.0%
! GCTAGTCAAGTTTTTATGGA+AGG - chr1_3:64716827-64716846 Msa0133460:intron 35.0%
!!! GAAGGTGTTGCATTTTCAAA+TGG - chr1_3:64716845-64716864 Msa0133460:intron 35.0%
ACAGGAACAAAAGCTCTTAT+TGG + chr1_3:64716881-64716900 None:intergenic 35.0%
! AAGGAGGATTTTCACTATTG+TGG - chr1_3:64716913-64716932 Msa0133460:intron 35.0%
! GGATTTTCACTATTGTGGAT+TGG - chr1_3:64716918-64716937 Msa0133460:intron 35.0%
GTTTAGAGATGAGATTTCCA+AGG - chr1_3:64716940-64716959 Msa0133460:intron 35.0%
AGGAATGATTAGGTAGCTAT+AGG - chr1_3:64717123-64717142 Msa0133460:intron 35.0%
TATGTTGAAGATGAGATGTG+TGG + chr1_3:64717351-64717370 None:intergenic 35.0%
AAAGTCAATAGTGCAGATCA+TGG + chr1_3:64717544-64717563 None:intergenic 35.0%
TTCTAACAGCCATAATCACA+TGG + chr1_3:64718100-64718119 None:intergenic 35.0%
!!! ATGACGTCAATTTTAGCTGA+GGG + chr1_3:64718170-64718189 None:intergenic 35.0%
! TCGCAGTACCATCTTTATTT+AGG - chr1_3:64718297-64718316 Msa0133460:intron 35.0%
! TAAATTAAGTTAACGGACCC+AGG - chr1_3:64718672-64718691 Msa0133460:intron 35.0%
CCAGAAAACATTACTACTAC+TGG + chr1_3:64718829-64718848 None:intergenic 35.0%
! CCAGTAGTAGTAATGTTTTC+TGG - chr1_3:64718826-64718845 Msa0133460:intron 35.0%
GTAATTGCAAGAAACAATGC+AGG - chr1_3:64718860-64718879 Msa0133460:intron 35.0%
CTGTAGTTCAATGTTGTCTT+TGG + chr1_3:64718912-64718931 None:intergenic 35.0%
!! CTCTAAGATGAATTCCTATG+TGG - chr1_3:64719253-64719272 Msa0133460:intron 35.0%
ACACATATCAGGGAAAGAAA+TGG - chr1_3:64719407-64719426 Msa0133460:intron 35.0%
TGACCTGCACAATTACATAT+TGG + chr1_3:64719456-64719475 None:intergenic 35.0%
GGAAGAATTGTTAATGTCTC+TGG - chr1_3:64719540-64719559 Msa0133460:intron 35.0%
! AATTGTTAATGTCTCTGGAG+AGG - chr1_3:64719545-64719564 Msa0133460:intron 35.0%
GGCTTACACATTTGCATATT+CGG - chr1_3:64719566-64719585 Msa0133460:intron 35.0%
TACACATTTGCATATTCGGA+AGG - chr1_3:64719570-64719589 Msa0133460:intron 35.0%
! TCTGGTGATGATTTGAACAT+AGG + chr1_3:64719647-64719666 None:intergenic 35.0%
GTGATCGATATCATATTAGC+AGG + chr1_3:64719886-64719905 None:intergenic 35.0%
TTAAAACGATTGTCTCACCA+TGG - chr1_3:64720024-64720043 Msa0133460:intron 35.0%
! CTTAATTTTTCATGCAGCCA+TGG + chr1_3:64720044-64720063 None:intergenic 35.0%
GCTGCATGAAAAATTAAGAG+CGG - chr1_3:64720046-64720065 Msa0133460:intron 35.0%
TACAACAAACAGAGTGCATA+TGG - chr1_3:64720106-64720125 Msa0133460:intron 35.0%
! TCACTTGTTACATCTTGATC+AGG - chr1_3:64720248-64720267 Msa0133460:intron 35.0%
ATTGTGAATTCTCTTCATCC+AGG - chr1_3:64720288-64720307 Msa0133460:intron 35.0%
GTACAAGATAATAGTTACCG+TGG + chr1_3:64720353-64720372 None:intergenic 35.0%
ATCATTAAAGCCCTATGACA+TGG - chr1_3:64720403-64720422 Msa0133460:intron 35.0%
CATTGTAAAATCCACGATAG+TGG + chr1_3:64720473-64720492 None:intergenic 35.0%
TAATTCTCTTTCTCAGACCA+TGG - chr1_3:64720571-64720590 Msa0133460:intron 35.0%
CGTGAATTAAGAAACGTAGT+TGG + chr1_3:64720647-64720666 None:intergenic 35.0%
! TTTGAATTGGGTGGTTTTTC+TGG - chr1_3:64720859-64720878 Msa0133460:intron 35.0%
!! TGGTTTGTTTGTTTGCACAT+TGG - chr1_3:64720879-64720898 Msa0133460:intron 35.0%
ACAGGTATAATACAGGTGAT+TGG - chr1_3:64721113-64721132 Msa0133460:intron 35.0%
CAGGTATAATACAGGTGATT+GGG - chr1_3:64721114-64721133 Msa0133460:intron 35.0%
TGTGATGAAAAATGTTCAGC+AGG - chr1_3:64721142-64721161 Msa0133460:intron 35.0%
GGGTCGTGTCAAATAAATAT+TGG - chr1_3:64721204-64721223 Msa0133460:intron 35.0%
TTCTCCTATCTAAATGTAGG+GGG - chr1_3:64721325-64721344 Msa0133460:intron 35.0%
!! CTGATTTGGCTAAGAAACTT+TGG - chr1_3:64721453-64721472 Msa0133460:intron 35.0%
CAGCATGAATTTGATTAAGG+AGG - chr1_3:64721481-64721500 Msa0133460:intron 35.0%
AAAAAATGAGCAGTGCTATG+TGG - chr1_3:64721578-64721597 Msa0133460:intron 35.0%
GGGTTGTAGTAATATAGAAG+TGG + chr1_3:64721692-64721711 None:intergenic 35.0%
TGCTTACATGGTTAGTAGAT+GGG + chr1_3:64721713-64721732 None:intergenic 35.0%
TTGCTTACATGGTTAGTAGA+TGG + chr1_3:64721714-64721733 None:intergenic 35.0%
TACAACAACAAAAACACCGA+TGG + chr1_3:64721790-64721809 None:intergenic 35.0%
AGTGACAACAACATTGTTGA+TGG + chr1_3:64721908-64721927 None:intergenic 35.0%
GAAGGACTGCATAGTTTAAT+AGG - chr1_3:64722056-64722075 Msa0133460:intron 35.0%
TAACACTGCCAAACAATTTG+TGG - chr1_3:64722099-64722118 Msa0133460:intron 35.0%
AACACTGCCAAACAATTTGT+GGG - chr1_3:64722100-64722119 Msa0133460:intron 35.0%
GAAATATGGGTTCCCTAATA+TGG - chr1_3:64722257-64722276 Msa0133460:intron 35.0%
TTTGCAAGAGGTCCATATTA+GGG + chr1_3:64722272-64722291 None:intergenic 35.0%
! TTTTGCAAGAGGTCCATATT+AGG + chr1_3:64722273-64722292 None:intergenic 35.0%
TAATATGGACCTCTTGCAAA+AGG - chr1_3:64722272-64722291 Msa0133460:intron 35.0%
AATATGGACCTCTTGCAAAA+GGG - chr1_3:64722273-64722292 Msa0133460:intron 35.0%
AGATTTAGGAGGTCAATGTT+TGG + chr1_3:64722300-64722319 None:intergenic 35.0%
CAACCAAGCACATAAAATGA+AGG - chr1_3:64722475-64722494 Msa0133460:intron 35.0%
! CTTCCTTCATTTTATGTGCT+TGG + chr1_3:64722481-64722500 None:intergenic 35.0%
!! AACCGGTTCAGATTTGTTTT+TGG + chr1_3:64722635-64722654 None:intergenic 35.0%
AATTAACCGAACCATTGCAT+TGG - chr1_3:64722676-64722695 Msa0133460:intron 35.0%
AATTCGGTTAACCAATGCAA+TGG + chr1_3:64722690-64722709 None:intergenic 35.0%
GTGAAGATCGCAGAAAAAAA+TGG + chr1_3:64723065-64723084 None:intergenic 35.0%
TCTTAGGAGTTGTCAAATGA+AGG - chr1_3:64723289-64723308 Msa0133460:intron 35.0%
TACAAACACACAAGTGAATC+TGG + chr1_3:64723357-64723376 None:intergenic 35.0%
CTTAAGGTCAATGCAACTTA+AGG + chr1_3:64723443-64723462 None:intergenic 35.0%
ACAGTAGAAGAAAAAGGAAG+AGG + chr1_3:64723940-64723959 None:intergenic 35.0%
ATTTCTCTGTTTCATCGAAG+TGG - chr1_3:64723967-64723986 Msa0133460:intron 35.0%
!! GTGTGTGGTATTGATTTGTA+TGG - chr1_3:64723992-64724011 Msa0133460:intron 35.0%
!! GTGTGGTATTGATTTGTATG+GGG - chr1_3:64723994-64724013 Msa0133460:intron 35.0%
ATCATCCTTTCTCCGATATA+TGG - chr1_3:64724096-64724115 Msa0133460:intron 35.0%
!! ATTTCTGGAATCTAACAAGG+TGG - chr1_3:64724176-64724195 Msa0133460:intron 35.0%
! GAATATTTTGTGTGATGGCT+TGG - chr1_3:64724232-64724251 Msa0133460:intron 35.0%
GCTGAAACAATTCAATAGCA+AGG + chr1_3:64724486-64724505 None:intergenic 35.0%
! GAGTTTCTTTTCCATCAACT+AGG + chr1_3:64724544-64724563 None:intergenic 35.0%
AACACAGACTAATCAACCTA+TGG + chr1_3:64724581-64724600 None:intergenic 35.0%
TCTGTGTTCAGTTACAATTC+AGG - chr1_3:64724593-64724612 Msa0133460:intron 35.0%
! GAAGTGAATTGGCTTAGAAA+GGG + chr1_3:64724702-64724721 None:intergenic 35.0%
! TGAAGTGAATTGGCTTAGAA+AGG + chr1_3:64724703-64724722 None:intergenic 35.0%
!!! TTTTTTGACTTGGATCGGAT+CGG - chr1_3:64725151-64725170 Msa0133460:intron 35.0%
TTCTGCTAAGTTAGTAGTTG+TGG + chr1_3:64725318-64725337 None:intergenic 35.0%
AAAAATCTGCTAAGGTCCAA+AGG + chr1_3:64725349-64725368 None:intergenic 35.0%
!!! ATATTGGTTTTGGTTCGGTT+CGG - chr1_3:64725772-64725791 Msa0133460:intron 35.0%
ACTGAACCAAAGTTATGGTT+CGG + chr1_3:64725826-64725845 None:intergenic 35.0%
! ACCATAACTTTGGTTCAGTT+CGG - chr1_3:64725827-64725846 Msa0133460:intron 35.0%
!!! CCGAAATTTTGAAATGGTTC+GGG + chr1_3:64725888-64725907 None:intergenic 35.0%
CCCGAACCATTTCAAAATTT+CGG - chr1_3:64725885-64725904 Msa0133460:intron 35.0%
!! ACCGAACCGAAATTTTGAAA+TGG + chr1_3:64725894-64725913 None:intergenic 35.0%
!! TTCAAAATTTCGGTTCGGTT+CGG - chr1_3:64725895-64725914 Msa0133460:intron 35.0%
ATGTGGCTATTCAACAAGAA+AGG - chr1_3:64726244-64726263 Msa0133460:intron 35.0%
ATTGCTAATAGACCATCGTT+TGG - chr1_3:64726449-64726468 Msa0133460:CDS 35.0%
TAATAGACCATCGTTTGGAT+TGG - chr1_3:64726454-64726473 Msa0133460:CDS 35.0%
TTCATAAGCTATCATGGAGA+TGG + chr1_3:64726581-64726600 None:intergenic 35.0%
! GCTCTTTTCATAAGCTATCA+TGG + chr1_3:64726587-64726606 None:intergenic 35.0%
GGGTATGCATGAAATCATTA+AGG + chr1_3:64726740-64726759 None:intergenic 35.0%
TTGAACCATGATGTTTATGC+TGG - chr1_3:64727237-64727256 Msa0133460:intron 35.0%
GTAACTATGTTGAAGATGTG+TGG + chr1_3:64727297-64727316 None:intergenic 35.0%
TTCTAACAGCCATAATCACA+TGG + chr1_3:64718100-64718119 None:intergenic 35.0%
!!! CATGACATCTATTTTAGCTG+AGG + chr1_3:64728117-64728136 None:intergenic 35.0%
CTCAGCTAAAATAGATGTCA+TGG - chr1_3:64728115-64728134 Msa0133460:intron 35.0%
GCATCAGAATTTAATTCCTC+TGG - chr1_3:64728176-64728195 Msa0133460:intron 35.0%
CTTGATGTAAGAAAAGGAAC+TGG - chr1_3:64718268-64718287 Msa0133460:intron 35.0%
CCTGGATAAAAAATGATCCT+GGG + chr1_3:64728247-64728266 None:intergenic 35.0%
ATAAAAGGGTAACTTGACAC+GGG - chr1_3:64728562-64728581 Msa0133460:intron 35.0%
! AATTAAGGTCCCGTTTGTTT+TGG - chr1_3:64728615-64728634 Msa0133460:intron 35.0%
ACAAATGCACCCTAAGTTAA+AGG - chr1_3:64728783-64728802 Msa0133460:intron 35.0%
TAAAAGGCAAATCTGCACAT+GGG + chr1_3:64728810-64728829 None:intergenic 35.0%
ATAAAAGGCAAATCTGCACA+TGG + chr1_3:64728811-64728830 None:intergenic 35.0%
AAATGGAACACAGATACTCA+TGG + chr1_3:64728894-64728913 None:intergenic 35.0%
GTAATTGCAAGAAACAATGC+AGG - chr1_3:64718860-64718879 Msa0133460:intron 35.0%
ATGCAGTTCAATGTTGTCTT+TGG + chr1_3:64728990-64729009 None:intergenic 35.0%
AACATATTTCCCACATACCT+AGG + chr1_3:64729027-64729046 None:intergenic 35.0%
AGGTATGTGGGAAATATGTT+TGG - chr1_3:64729027-64729046 Msa0133460:intron 35.0%
GCACATGAAAGTAAGAAAGA+AGG - chr1_3:64729241-64729260 Msa0133460:intron 35.0%
GTTGCATGAAGAATTAAGAG+TGG - chr1_3:64729424-64729443 Msa0133460:intron 35.0%
AAGAATTAAGAGTGGAAAGG+TGG - chr1_3:64729432-64729451 Msa0133460:intron 35.0%
CTGTAACTGTATACAAGGAA+GGG + chr1_3:64729468-64729487 None:intergenic 35.0%
GTATACAGTTACAGCAAATG+GGG - chr1_3:64729474-64729493 Msa0133460:intron 35.0%
! TCACTTGTTACATCTTGATC+AGG - chr1_3:64720248-64720267 Msa0133460:intron 35.0%
ATTGTGAATTCTCTTCATCC+AGG - chr1_3:64720288-64720307 Msa0133460:intron 35.0%
! CATTTAGAATGTCATGTCAC+AGG + chr1_3:64729794-64729813 None:intergenic 35.0%
!!! TAGGTGTTTTATTTGCACAC+TGG - chr1_3:64729897-64729916 Msa0133460:intron 35.0%
TGTGATGAAAAATGTTCAGC+AGG - chr1_3:64721142-64721161 Msa0133460:intron 35.0%
TTCTCCTATCTAAATGTAGG+GGG - chr1_3:64721325-64721344 Msa0133460:intron 35.0%
!! CTGATTTGGCTAAGAAACTT+TGG - chr1_3:64721453-64721472 Msa0133460:intron 35.0%
CAGCATGAATTTGATTAAGG+AGG - chr1_3:64721481-64721500 Msa0133460:intron 35.0%
AAATAGGGTGGAGTTTAACA+TGG - chr1_3:64730639-64730658 Msa0133460:intron 35.0%
AATAGGGTGGAGTTTAACAT+GGG - chr1_3:64730640-64730659 Msa0133460:intron 35.0%
GAGGGAACATGATAATATCA+TGG + chr1_3:64730726-64730745 None:intergenic 35.0%
! GTGATAAAATACAGTGCTGA+GGG + chr1_3:64730744-64730763 None:intergenic 35.0%
TGTGATAAAATACAGTGCTG+AGG + chr1_3:64730745-64730764 None:intergenic 35.0%
! ATGAAAGAGAGATAGTGGTT+GGG + chr1_3:64730779-64730798 None:intergenic 35.0%
! TTACTGTGATATAGGAGTGT+TGG + chr1_3:64730856-64730875 None:intergenic 35.0%
AGTTCAAGCATCATGATGTT+TGG - chr1_3:64730990-64731009 Msa0133460:intron 35.0%
AAGCATCATGATGTTTGGAA+GGG - chr1_3:64730995-64731014 Msa0133460:intron 35.0%
ATGTTTGGAAGGGAAAATCT+TGG - chr1_3:64731005-64731024 Msa0133460:intron 35.0%
TTGACCAAAAATTTCCTGAC+GGG - chr1_3:64731035-64731054 Msa0133460:intron 35.0%
! GGTTTTCAATTAGAAGCCAT+TGG - chr1_3:64731293-64731312 Msa0133460:intron 35.0%
! GAGAGAGCACAATAATATCA+TGG - chr1_3:64731425-64731444 Msa0133460:intron 35.0%
AAAATCTAATTGACCCATGG+TGG - chr1_3:64731469-64731488 Msa0133460:intron 35.0%
AAATCTAATTGACCCATGGT+GGG - chr1_3:64731470-64731489 Msa0133460:intron 35.0%
! TTCATGGTGGAGTTTAACAT+GGG + chr1_3:64731511-64731530 None:intergenic 35.0%
! TTTCATGGTGGAGTTTAACA+TGG + chr1_3:64731512-64731531 None:intergenic 35.0%
GTTAAACTCCACCATGAAAT+AGG - chr1_3:64731513-64731532 Msa0133460:intron 35.0%
TAAACTCCACCATGAAATAG+GGG - chr1_3:64731515-64731534 Msa0133460:intron 35.0%
TATTAAGGACCCCTATTTCA+TGG + chr1_3:64731527-64731546 None:intergenic 35.0%
TGAAATAGGGGTCCTTAATA+TGG - chr1_3:64731527-64731546 Msa0133460:intron 35.0%
GATTTAGGAGGTCCATATTA+AGG + chr1_3:64731542-64731561 None:intergenic 35.0%
GGCAATATCTGGTTAGATTT+AGG + chr1_3:64731557-64731576 None:intergenic 35.0%
TAGTGAACCTTATTGTCAGT+TGG - chr1_3:64731814-64731833 Msa0133460:intron 35.0%
GACTTGTATCAGTATACAAC+TGG - chr1_3:64732128-64732147 Msa0133460:intron 35.0%
CTGAGTTAATATGTCTTCTC+AGG + chr1_3:64732338-64732357 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr1_3:64732861-64732880 Msa0133460:intron 35.0%
!! ATTCTTCTTTGTTGGTGGTT+GGG + chr1_3:64732895-64732914 None:intergenic 35.0%
!! AATTCTTCTTTGTTGGTGGT+TGG + chr1_3:64732896-64732915 None:intergenic 35.0%
TAGCCAATTTGATCTTGATC+GGG + chr1_3:64733006-64733025 None:intergenic 35.0%
CACAAGATTAGCACTTATAG+TGG + chr1_3:64733637-64733656 None:intergenic 35.0%
CACTATAAGTGCTAATCTTG+TGG - chr1_3:64733635-64733654 Msa0133460:intron 35.0%
AATCGCTTCCAAATCCAATT+TGG + chr1_3:64733908-64733927 None:intergenic 35.0%
TTAACTTTCTCTTTCTCCTC+CGG - chr1_3:64734407-64734426 Msa0133460:five_prime_UTR 35.0%
! ATTTCACCTTTACCCCATTT+TGG + chr1_3:64734921-64734940 None:intergenic 35.0%
CACTGATCAAATATTTAGGG+AGG + chr1_3:64735058-64735077 None:intergenic 35.0%
!! TATCTTTGATAGTGATCTCG+AGG - chr1_3:64735132-64735151 Msa0133460:five_prime_UTR 35.0%
TCAAGACGATTTAGTACAGT+TGG - chr1_3:64735161-64735180 Msa0133460:intron 35.0%
TTGACAACAATGATATTGCG+AGG + chr1_3:64735377-64735396 None:intergenic 35.0%
TGAGATCAAATCATCTCATG+GGG - chr1_3:64735558-64735577 Msa0133460:intron 35.0%
!!! TCTGCATTCTACTTTTTCTC+AGG - chr1_3:64735808-64735827 Msa0133460:intron 35.0%
! TTATTGAGGATTTTACCCAC+GGG + chr1_3:64736050-64736069 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG + chr1_3:64736120-64736139 None:intergenic 35.0%
GTCAATGGATATCATAGGTA+CGG + chr1_3:64736421-64736440 None:intergenic 35.0%
GGTATAACTTCCATCGTTTA+GGG + chr1_3:64736446-64736465 None:intergenic 35.0%
! AGGGTGAAGGTATAATTGTA+GGG + chr1_3:64736475-64736494 None:intergenic 35.0%
! AAGGGTGAAGGTATAATTGT+AGG + chr1_3:64736476-64736495 None:intergenic 35.0%
! GGTAGTTTGTGTCTAATGTA+AGG + chr1_3:64736495-64736514 None:intergenic 35.0%
! TTTCTAGTAAAAACCTTCGC+TGG - chr1_3:64736581-64736600 Msa0133460:intron 35.0%
TTCTAGTAAAAACCTTCGCT+GGG - chr1_3:64736582-64736601 Msa0133460:intron 35.0%
GACAGAGAAGAATACGATTT+CGG + chr1_3:64736924-64736943 None:intergenic 35.0%
! TACTAAGACTTGATTCGAAG+AGG - chr1_3:64736982-64737001 Msa0133460:five_prime_UTR 35.0%
CAATGGAATGATATTGGTGA+GGG + chr1_3:64737039-64737058 None:intergenic 35.0%
ACAATGGAATGATATTGGTG+AGG + chr1_3:64737040-64737059 None:intergenic 35.0%
ATGTGCCAAGCAAAAAACAA+TGG + chr1_3:64737056-64737075 None:intergenic 35.0%
AAGTACATATGTTGGGGTAT+AGG - chr1_3:64737342-64737361 Msa0133460:five_prime_UTR 35.0%
AGTACATATGTTGGGGTATA+GGG - chr1_3:64737343-64737362 Msa0133460:five_prime_UTR 35.0%
!! TCAAACGGTTTTTGTTTGCA+TGG + chr1_3:64737508-64737527 None:intergenic 35.0%
GGAAGTGAAAAGTCATTAAC+AGG + chr1_3:64737604-64737623 None:intergenic 35.0%
GACTATATGTTGAAGATGTG+TGG + chr1_3:64737643-64737662 None:intergenic 35.0%
! CCCTTTTCTTTAAACATCAG+TGG - chr1_3:64737900-64737919 Msa0133460:five_prime_UTR 35.0%
TTCTTTAAACATCAGTGGAG+TGG - chr1_3:64737905-64737924 Msa0133460:five_prime_UTR 35.0%
!! ATGGTTAGCCCTGAAGATTT+TGG - chr1_3:64716575-64716594 Msa0133460:intron 40.0%
!! TGTTCTTTTGAAGGGTGAGA+TGG + chr1_3:64716653-64716672 None:intergenic 40.0%
AGAGATGAGATTTCCAAGGT+TGG - chr1_3:64716944-64716963 Msa0133460:intron 40.0%
! CTGTGGCTAATATGGCTTTT+TGG - chr1_3:64717017-64717036 Msa0133460:intron 40.0%
AATAACCAGCAGAGAAGTCA+TGG + chr1_3:64717210-64717229 None:intergenic 40.0%
CATTGGAATGCGTTCTTATC+AGG - chr1_3:64717316-64717335 Msa0133460:intron 40.0%
GAAATCCCTTTCTTCCTGAA+TGG + chr1_3:64717613-64717632 None:intergenic 40.0%
TTCAGGAAGAAAGGGATTTC+TGG - chr1_3:64717613-64717632 Msa0133460:intron 40.0%
! AAAGGGATTTCTGGATTCTC+AGG - chr1_3:64717622-64717641 Msa0133460:intron 40.0%
! AAGGGATTTCTGGATTCTCA+GGG - chr1_3:64717623-64717642 Msa0133460:intron 40.0%
ACTGCTGAACAAGTTACTCA+TGG - chr1_3:64717652-64717671 Msa0133460:intron 40.0%
ACTCATGGAATTGATGCAAC+TGG - chr1_3:64717667-64717686 Msa0133460:intron 40.0%
CTACTATTCAACAAAGGGCA+TGG + chr1_3:64717765-64717784 None:intergenic 40.0%
CTGCTGAAATTTGCATAGTC+AGG - chr1_3:64717928-64717947 Msa0133460:intron 40.0%
!!! CATGACGTCAATTTTAGCTG+AGG + chr1_3:64718171-64718190 None:intergenic 40.0%
CTCAGCTAAAATTGACGTCA+TGG - chr1_3:64718169-64718188 Msa0133460:intron 40.0%
GGAGTTAGATCTCAGTTCAA+TGG - chr1_3:64718190-64718209 Msa0133460:intron 40.0%
AAGACCAGAGGAGTTGAATT+CGG + chr1_3:64718237-64718256 None:intergenic 40.0%
TGTAAGAAAAGGAACCGACA+TGG - chr1_3:64718273-64718292 Msa0133460:intron 40.0%
GATAAAGGGCTAACTTGACA+CGG - chr1_3:64718619-64718638 Msa0133460:intron 40.0%
AACTGGAACACAGATACTCA+TGG + chr1_3:64718774-64718793 None:intergenic 40.0%
TGTCTTTGGACAGCATGAAA+GGG + chr1_3:64718898-64718917 None:intergenic 40.0%
TTGTCTTTGGACAGCATGAA+AGG + chr1_3:64718899-64718918 None:intergenic 40.0%
CACAAACCACTTAGGTATGT+GGG - chr1_3:64718937-64718956 Msa0133460:intron 40.0%
ATATTGCCCACATACCTAAG+TGG + chr1_3:64718946-64718965 None:intergenic 40.0%
ACACACACACACACATATCA+GGG - chr1_3:64719397-64719416 Msa0133460:intron 40.0%
GCACACGAAAGTAAGAAAGA+AGG - chr1_3:64719519-64719538 Msa0133460:intron 40.0%
! TGGGAAATCGGCTTTACTAT+TGG - chr1_3:64719768-64719787 Msa0133460:intron 40.0%
! CATCGTTATCAGCAGGTTTT+TGG + chr1_3:64719939-64719958 None:intergenic 40.0%
! CAAAAACCTGCTGATAACGA+TGG - chr1_3:64719937-64719956 Msa0133460:intron 40.0%
CTCATTTCAACGAGTACTAC+AGG + chr1_3:64719973-64719992 None:intergenic 40.0%
CTGTAGTACTCGTTGAAATG+AGG - chr1_3:64719971-64719990 Msa0133460:intron 40.0%
AGAGAAACTAGCATACCTTG+AGG + chr1_3:64720180-64720199 None:intergenic 40.0%
TTACATCTTGATCAGGCTGA+TGG - chr1_3:64720255-64720274 Msa0133460:intron 40.0%
TACATCTTGATCAGGCTGAT+GGG - chr1_3:64720256-64720275 Msa0133460:intron 40.0%
AGATTGGTGAGAATGATTCC+TGG + chr1_3:64720309-64720328 None:intergenic 40.0%
ATAACAACGGTAGGTAATGC+AGG + chr1_3:64720447-64720466 None:intergenic 40.0%
! ACGATAGTGGCACATAACAA+CGG + chr1_3:64720460-64720479 None:intergenic 40.0%
GAATGAGTGGTGAAAGTTAG+TGG + chr1_3:64720804-64720823 None:intergenic 40.0%
CACTAATTCCCTTCACTTGT+GGG + chr1_3:64721379-64721398 None:intergenic 40.0%
CAAAAGAGAATCACAGGGAA+GGG - chr1_3:64721427-64721446 Msa0133460:intron 40.0%
GCTTACATGGTTAGTAGATG+GGG + chr1_3:64721712-64721731 None:intergenic 40.0%
ACTTAGAGGAGTTGCTTACA+TGG + chr1_3:64721725-64721744 None:intergenic 40.0%
GCTGCATTCATAATCACCAT+CGG - chr1_3:64721771-64721790 Msa0133460:intron 40.0%
CAAATGGCAACTAATCTGTG+CGG + chr1_3:64721841-64721860 None:intergenic 40.0%
GGACTGCATAGTTTAATAGG+AGG - chr1_3:64722059-64722078 Msa0133460:intron 40.0%
ACACTGCCAAACAATTTGTG+GGG - chr1_3:64722101-64722120 Msa0133460:intron 40.0%
TGCAAACCCCACAAATTGTT+TGG + chr1_3:64722110-64722129 None:intergenic 40.0%
! TGAAAGTGGGGTTCTTTTGT+TGG + chr1_3:64722578-64722597 None:intergenic 40.0%
AACAAAAGAACCCCACTTTC+AGG - chr1_3:64722577-64722596 Msa0133460:intron 40.0%
GGTTAACCAATGCAATGGTT+CGG + chr1_3:64722685-64722704 None:intergenic 40.0%
AACCCTAATTTCTCCTCTTC+AGG - chr1_3:64722902-64722921 Msa0133460:intron 40.0%
ACCCTAATTTCTCCTCTTCA+GGG - chr1_3:64722903-64722922 Msa0133460:intron 40.0%
TCCCTGAAGAGGAGAAATTA+GGG + chr1_3:64722907-64722926 None:intergenic 40.0%
AGCTTCAATATCACCATCAC+TGG + chr1_3:64722930-64722949 None:intergenic 40.0%
GAAAAATGCTCACTGGTCAA+TGG + chr1_3:64723009-64723028 None:intergenic 40.0%
CAGAAGAGAAAAATGCTCAC+TGG + chr1_3:64723016-64723035 None:intergenic 40.0%
!! ATGGTCTCTGAAGTAGAAGT+GGG + chr1_3:64723046-64723065 None:intergenic 40.0%
!! AATGGTCTCTGAAGTAGAAG+TGG + chr1_3:64723047-64723066 None:intergenic 40.0%
TTATGCGAACTCTTCACCTA+AGG - chr1_3:64723100-64723119 Msa0133460:intron 40.0%
TTTCTGGGTATGATTGACAG+TGG - chr1_3:64723215-64723234 Msa0133460:intron 40.0%
TCCAATGTTGTTATAGGCAG+TGG - chr1_3:64723244-64723263 Msa0133460:intron 40.0%
TCCACTGCCTATAACAACAT+TGG + chr1_3:64723248-64723267 None:intergenic 40.0%
!! CAGACTAGTCTTGTAGTCTT+AGG - chr1_3:64723273-64723292 Msa0133460:intron 40.0%
GCAAGAAGCAATGCAACTTA+AGG + chr1_3:64723459-64723478 None:intergenic 40.0%
! ATGTGTTTCTGTTGCGGAAT+TGG - chr1_3:64723626-64723645 Msa0133460:intron 40.0%
CAAGGGATCCTATCATCATA+TGG + chr1_3:64723847-64723866 None:intergenic 40.0%
CATATGATGATAGGATCCCT+TGG - chr1_3:64723845-64723864 Msa0133460:intron 40.0%
CAGCTCACAGTAGAAGAAAA+AGG + chr1_3:64723946-64723965 None:intergenic 40.0%
TTCCAGAAATGCCACTAAGT+GGG + chr1_3:64724166-64724185 None:intergenic 40.0%
ATTCCAGAAATGCCACTAAG+TGG + chr1_3:64724167-64724186 None:intergenic 40.0%
!! GGCATTTCTGGAATCTAACA+AGG - chr1_3:64724173-64724192 Msa0133460:intron 40.0%
TCACAAAGAGAAAGTGACTC+TGG - chr1_3:64724423-64724442 Msa0133460:intron 40.0%
! CTTCATGTTACTGGTTGTGT+TGG - chr1_3:64724456-64724475 Msa0133460:intron 40.0%
TTTCTATAGCTTTCGCGGTT+CGG + chr1_3:64725212-64725231 None:intergenic 40.0%
TCCTCTTTCTATAGCTTTCG+CGG + chr1_3:64725217-64725236 None:intergenic 40.0%
GGTTAACCGAACCATAACTT+TGG - chr1_3:64725817-64725836 Msa0133460:intron 40.0%
ACCGAACTGAACCAAAGTTA+TGG + chr1_3:64725831-64725850 None:intergenic 40.0%
!! ATACCTGAAACGGTTTGGTT+CGG - chr1_3:64725858-64725877 Msa0133460:intron 40.0%
TGATGGAATGGTTGTCCTTA+GGG + chr1_3:64725954-64725973 None:intergenic 40.0%
TTGATGGAATGGTTGTCCTT+AGG + chr1_3:64725955-64725974 None:intergenic 40.0%
TCACTATTAGTGCAATGGGT+TGG + chr1_3:64726000-64726019 None:intergenic 40.0%
ACCATGATCTTGAATGTGTG+AGG + chr1_3:64726119-64726138 None:intergenic 40.0%
TTCTTTCCTCCTCTTTAGCT+AGG - chr1_3:64726360-64726379 Msa0133460:CDS 40.0%
!! AGTTGGTAGGTAACCCATTT+GGG + chr1_3:64726425-64726444 None:intergenic 40.0%
ATGGTGTGTGACTGTAATTG+TGG - chr1_3:64726819-64726838 Msa0133460:intron 40.0%
AAAGACAATAGATCTGGCTG+TGG + chr1_3:64726878-64726897 None:intergenic 40.0%
GCTGTCAAAGACAATAGATC+TGG + chr1_3:64726884-64726903 None:intergenic 40.0%
ATGGCATCAAGTTTAGCAGA+GGG + chr1_3:64727141-64727160 None:intergenic 40.0%
AATGATGACATCAGTGGGAT+TGG - chr1_3:64727345-64727364 Msa0133460:intron 40.0%
CAATAGTGCAGATCATGCTT+TGG + chr1_3:64727486-64727505 None:intergenic 40.0%
ACTGCTGAAGAAGTTACTCA+TGG - chr1_3:64727596-64727615 Msa0133460:intron 40.0%
ACTCATGGAATTGATGCAAC+TGG - chr1_3:64717667-64717686 Msa0133460:intron 40.0%
CTGCTGAAATTTGCATAGTC+AGG - chr1_3:64717928-64717947 Msa0133460:intron 40.0%
GGATATGATGGTATGGTAAC+AGG - chr1_3:64727966-64727985 Msa0133460:intron 40.0%
GGAGTTAGATCTCAGTTCAT+TGG - chr1_3:64728136-64728155 Msa0133460:intron 40.0%
TGTAAGAAAAGGAACTGGCT+TGG - chr1_3:64728219-64728238 Msa0133460:intron 40.0%
!!! CCCAGGATCATTTTTTATCC+AGG - chr1_3:64728244-64728263 Msa0133460:intron 40.0%
GCCTGGATAAAAAATGATCC+TGG + chr1_3:64728248-64728267 None:intergenic 40.0%
TCAGATTCGAATCCTTCTGT+GGG + chr1_3:64728393-64728412 None:intergenic 40.0%
TATGATAAGGAAACCCCCAA+TGG + chr1_3:64728467-64728486 None:intergenic 40.0%
TAAAAGGGTAACTTGACACG+GGG - chr1_3:64728563-64728582 Msa0133460:intron 40.0%
! CACATGGGTCCTTTAACTTA+GGG + chr1_3:64728795-64728814 None:intergenic 40.0%
TGTCTTTGGACAGCATGAAA+GGG + chr1_3:64718898-64718917 None:intergenic 40.0%
TTGTCTTTGGACAGCATGAA+AGG + chr1_3:64718899-64718918 None:intergenic 40.0%
! CATTTTGCTACAAACCACCT+AGG - chr1_3:64729007-64729026 Msa0133460:intron 40.0%
TACAAACCACCTAGGTATGT+GGG - chr1_3:64729015-64729034 Msa0133460:intron 40.0%
ATATTTCCCACATACCTAGG+TGG + chr1_3:64729024-64729043 None:intergenic 40.0%
! TTGTCAAAACGGATTCCTTC+AGG + chr1_3:64719588-64719607 None:intergenic 40.0%
GCTGTAACTGTATACAAGGA+AGG + chr1_3:64729469-64729488 None:intergenic 40.0%
AGAGAAACTAGCATACCTTG+AGG + chr1_3:64720180-64720199 None:intergenic 40.0%
TTACATCTTGATCAGGCTGA+TGG - chr1_3:64720255-64720274 Msa0133460:intron 40.0%
TACATCTTGATCAGGCTGAT+GGG - chr1_3:64720256-64720275 Msa0133460:intron 40.0%
AGATTGGTGAGAATGATTCC+TGG + chr1_3:64720309-64720328 None:intergenic 40.0%
ACGATAGTGCCACATAACAT+TGG + chr1_3:64729837-64729856 None:intergenic 40.0%
AATGTTATGTGGCACTATCG+TGG - chr1_3:64729836-64729855 Msa0133460:intron 40.0%
! GCACTATCGTGGATTTTACA+AGG - chr1_3:64729847-64729866 Msa0133460:intron 40.0%
CAATGCTACATAGCATGTTG+TGG + chr1_3:64730202-64730221 None:intergenic 40.0%
CAAAAGAGAATCACAGGGAA+GGG - chr1_3:64721427-64721446 Msa0133460:intron 40.0%
TATGGTACACACACGGTATT+GGG + chr1_3:64730403-64730422 None:intergenic 40.0%
ATATGGTACACACACGGTAT+TGG + chr1_3:64730404-64730423 None:intergenic 40.0%
GTGGAGTTTAACATGGGAAA+GGG - chr1_3:64730646-64730665 Msa0133460:intron 40.0%
GTAAAACTCCAATTGACCCA+TGG + chr1_3:64730685-64730704 None:intergenic 40.0%
! CATGAAAGAGAGATAGTGGT+TGG + chr1_3:64730780-64730799 None:intergenic 40.0%
GGGCTATGTTACTGTGATAT+AGG + chr1_3:64730864-64730883 None:intergenic 40.0%
CAAGCATCATGATGTTTGGA+AGG - chr1_3:64730994-64731013 Msa0133460:intron 40.0%
! CATTCCCGTCAGGAAATTTT+TGG + chr1_3:64731042-64731061 None:intergenic 40.0%
CAAAAATTTCCTGACGGGAA+TGG - chr1_3:64731040-64731059 Msa0133460:intron 40.0%
AACCTCACTATCATCTCCAA+TGG + chr1_3:64731312-64731331 None:intergenic 40.0%
! ATTGGAGATGATAGTGAGGT+TGG - chr1_3:64731311-64731330 Msa0133460:intron 40.0%
AAACGTGAGTGAGAATGGTT+GGG - chr1_3:64731374-64731393 Msa0133460:intron 40.0%
GTGGAGTTTAACATGGGAAA+GGG + chr1_3:64730646-64730665 None:intergenic 40.0%
GCAAGTAGATAGAGCACATA+AGG - chr1_3:64731751-64731770 Msa0133460:intron 40.0%
TAAGGTAATAGTTCCTCCTC+AGG - chr1_3:64731769-64731788 Msa0133460:intron 40.0%
!!! GCAGTTTTTTTTTCCTGAGG+AGG + chr1_3:64731785-64731804 None:intergenic 40.0%
TTGTGTGAGAGAAAAGTTGG+AGG - chr1_3:64732581-64732600 Msa0133460:intron 40.0%
TGTGTGAGAGAAAAGTTGGA+GGG - chr1_3:64732582-64732601 Msa0133460:intron 40.0%
GAAAAGTTGGAGGGTAAAGT+TGG - chr1_3:64732591-64732610 Msa0133460:intron 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr1_3:64732685-64732704 Msa0133460:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:64732686-64732705 Msa0133460:intron 40.0%
GCATAATATATGCAAGGTCC+GGG - chr1_3:64732862-64732881 Msa0133460:intron 40.0%
!! TTCTTCTTTGTTGGTGGTTG+GGG + chr1_3:64732894-64732913 None:intergenic 40.0%
ACTGGGAATGTGTCAAACTT+CGG + chr1_3:64732980-64732999 None:intergenic 40.0%
TCACCCGATCAAGATCAAAT+TGG - chr1_3:64733000-64733019 Msa0133460:exon 40.0%
! TGTACCTCTTTTCATTGCCT+TGG + chr1_3:64733449-64733468 None:intergenic 40.0%
TGCTAATCTTGTGGCATCAA+AGG - chr1_3:64733644-64733663 Msa0133460:intron 40.0%
!!! TGGAAGTATTTTCCGAACGT+AGG - chr1_3:64733875-64733894 Msa0133460:intron 40.0%
GTCGTGTTCCAAATTGGATT+TGG - chr1_3:64733897-64733916 Msa0133460:intron 40.0%
! ATGACTTTGATGGCTCAAAG+TGG + chr1_3:64733936-64733955 None:intergenic 40.0%
!! AAGGATTTCATCTTTGGGAC+AGG + chr1_3:64734317-64734336 None:intergenic 40.0%
! AAGATGAATTTGAGATCCGG+AGG + chr1_3:64734426-64734445 None:intergenic 40.0%
AGTAATTGTTCCTACTGAGG+TGG + chr1_3:64734635-64734654 None:intergenic 40.0%
CCAAGTAATTGTTCCTACTG+AGG + chr1_3:64734638-64734657 None:intergenic 40.0%
CCTCAGTAGGAACAATTACT+TGG - chr1_3:64734635-64734654 Msa0133460:intron 40.0%
AGATGTGGAAGTTGCCTATT+AGG + chr1_3:64734798-64734817 None:intergenic 40.0%
GAAGAATAACACGAGAGATG+TGG + chr1_3:64734813-64734832 None:intergenic 40.0%
TAAGAAGGAGAAGGAGAAGA+AGG + chr1_3:64734864-64734883 None:intergenic 40.0%
GTCACAAAGGGTCAAAATTG+AGG - chr1_3:64734891-64734910 Msa0133460:intron 40.0%
! GGTTTTCCAAAATGGGGTAA+AGG - chr1_3:64734912-64734931 Msa0133460:intron 40.0%
GAAGTTGAGATCTCATAGCT+GGG + chr1_3:64735325-64735344 None:intergenic 40.0%
TCAACTTCGAACTCAAGTGA+AGG - chr1_3:64735337-64735356 Msa0133460:intron 40.0%
!! ATCTTTGAGGTACCAACTCA+TGG - chr1_3:64735504-64735523 Msa0133460:intron 40.0%
!! TCTTTGAGGTACCAACTCAT+GGG - chr1_3:64735505-64735524 Msa0133460:intron 40.0%
ATAAGCTTCTACCCATGAGT+TGG + chr1_3:64735519-64735538 None:intergenic 40.0%
!!! ACCATTTTTCTTTGGTGGTG+TGG - chr1_3:64735595-64735614 Msa0133460:intron 40.0%
ACCACACCACCAAAGAAAAA+TGG + chr1_3:64735599-64735618 None:intergenic 40.0%
!!! GCATTCTACTTTTTCTCAGG+AGG - chr1_3:64735811-64735830 Msa0133460:intron 40.0%
ACAAGTCACTCGTGTAAACT+AGG - chr1_3:64735996-64736015 Msa0133460:intron 40.0%
CAAGTCACTCGTGTAAACTA+GGG - chr1_3:64735997-64736016 Msa0133460:intron 40.0%
AAGTCACTCGTGTAAACTAG+GGG - chr1_3:64735998-64736017 Msa0133460:intron 40.0%
CGGGTATCATATCTATCCAA+CGG - chr1_3:64736372-64736391 Msa0133460:five_prime_UTR 40.0%
GGGTATCATATCTATCCAAC+GGG - chr1_3:64736373-64736392 Msa0133460:five_prime_UTR 40.0%
GGTATCATATCTATCCAACG+GGG - chr1_3:64736374-64736393 Msa0133460:five_prime_UTR 40.0%
GGGATGTCAATGGATATCAT+AGG + chr1_3:64736426-64736445 None:intergenic 40.0%
GGGTATAACTTCCATCGTTT+AGG + chr1_3:64736447-64736466 None:intergenic 40.0%
! AGGTATAATTGTAGGGGTGT+GGG + chr1_3:64736468-64736487 None:intergenic 40.0%
AAGGTATAATTGTAGGGGTG+TGG + chr1_3:64736469-64736488 None:intergenic 40.0%
! GGGTGAAGGTATAATTGTAG+GGG + chr1_3:64736474-64736493 None:intergenic 40.0%
TGTGTCTAATGTAAGGGTGA+AGG + chr1_3:64736488-64736507 None:intergenic 40.0%
TCTAGTAAAAACCTTCGCTG+GGG - chr1_3:64736583-64736602 Msa0133460:intron 40.0%
!! GTCAGTGGATTATGAATTGC+AGG - chr1_3:64736720-64736739 Msa0133460:intron 40.0%
! ATTCTTCCCGAAATTGGTTC+CGG - chr1_3:64736798-64736817 Msa0133460:intron 40.0%
GAATTTCCGGAACCAATTTC+GGG + chr1_3:64736807-64736826 None:intergenic 40.0%
CGAATTTCCGGAACCAATTT+CGG + chr1_3:64736808-64736827 None:intergenic 40.0%
TAAGAATACGATTTCGGCTG+AGG + chr1_3:64736865-64736884 None:intergenic 40.0%
! TAAGACTTGATTCGAAGAGG+TGG - chr1_3:64736985-64737004 Msa0133460:five_prime_UTR 40.0%
! AAGACTTGATTCGAAGAGGT+GGG - chr1_3:64736986-64737005 Msa0133460:five_prime_UTR 40.0%
GTGAGGGATAGAGAAAAGTA+TGG + chr1_3:64737023-64737042 None:intergenic 40.0%
AGTGACAGAACAATCACTAG+TGG + chr1_3:64737091-64737110 None:intergenic 40.0%
TACTATGCCCTTCTCACTAT+TGG - chr1_3:64737110-64737129 Msa0133460:five_prime_UTR 40.0%
GTTCGATCCAATAGTGAGAA+GGG + chr1_3:64737120-64737139 None:intergenic 40.0%
TGGAACCTTTATATCAGGTG+CGG - chr1_3:64737230-64737249 Msa0133460:five_prime_UTR 40.0%
! AGGGGTGAAAGTACATATGT+TGG - chr1_3:64737334-64737353 Msa0133460:five_prime_UTR 40.0%
! GGGGTGAAAGTACATATGTT+GGG - chr1_3:64737335-64737354 Msa0133460:five_prime_UTR 40.0%
! GGGTGAAAGTACATATGTTG+GGG - chr1_3:64737336-64737355 Msa0133460:five_prime_UTR 40.0%
ATTTCCCTAAACGATGCATC+TGG - chr1_3:64737370-64737389 Msa0133460:intron 40.0%
ATGTTGAAGATGTGTGGAAG+TGG + chr1_3:64737637-64737656 None:intergenic 40.0%
ACTATGCTCTTCACCAACCT+TGG + chr1_3:64716960-64716979 None:intergenic 45.0%
!! AAGGTTGGTGAAGAGCATAG+TGG - chr1_3:64716959-64716978 Msa0133460:intron 45.0%
!! AGCACTTGCTGTGGCTAATA+TGG - chr1_3:64717009-64717028 Msa0133460:intron 45.0%
TTGAACCATGACTTCTCTGC+TGG - chr1_3:64717202-64717221 Msa0133460:intron 45.0%
TTACCATCATGTGGCCATTC+AGG - chr1_3:64717596-64717615 Msa0133460:intron 45.0%
ATGTGGCCATTCAGGAAGAA+AGG - chr1_3:64717604-64717623 Msa0133460:intron 45.0%
TGTGGCCATTCAGGAAGAAA+GGG - chr1_3:64717605-64717624 Msa0133460:intron 45.0%
GGATATGATGGCATGGTAAC+AGG - chr1_3:64718020-64718039 Msa0133460:intron 45.0%
AGTCTCAACTCCAATACCAC+TGG + chr1_3:64718051-64718070 None:intergenic 45.0%
! TGTGACCTCATTGTTGTTCG+AGG - chr1_3:64718488-64718507 Msa0133460:intron 45.0%
! GTGACCTCATTGTTGTTCGA+GGG - chr1_3:64718489-64718508 Msa0133460:intron 45.0%
TAGACCCTCGAACAACAATG+AGG + chr1_3:64718496-64718515 None:intergenic 45.0%
CAGTTTGCCACAAACCACTT+AGG - chr1_3:64718929-64718948 Msa0133460:intron 45.0%
CCACATACCTAAGTGGTTTG+TGG + chr1_3:64718939-64718958 None:intergenic 45.0%
CCACAAACCACTTAGGTATG+TGG - chr1_3:64718936-64718955 Msa0133460:intron 45.0%
AGAGAAAAGGAGACATGCAC+TGG - chr1_3:64719065-64719084 Msa0133460:intron 45.0%
!! AGTTACAAAGGGTGCTTCCA+TGG - chr1_3:64719155-64719174 Msa0133460:intron 45.0%
GTGTGTGTGTGTAGTGAAGT+AGG + chr1_3:64719375-64719394 None:intergenic 45.0%
CACACACACACACACATATC+AGG - chr1_3:64719396-64719415 Msa0133460:intron 45.0%
! TTTCGGTTTTCTGCGAGTCT+TGG - chr1_3:64719826-64719845 Msa0133460:intron 45.0%
ACATCTTGATCAGGCTGATG+GGG - chr1_3:64720257-64720276 Msa0133460:intron 45.0%
ACCAATCTTTCCCGCCATAT+GGG - chr1_3:64720321-64720340 Msa0133460:intron 45.0%
! TACCGTGGATTACACCCATA+TGG + chr1_3:64720338-64720357 None:intergenic 45.0%
TAGTGGCACATAACAACGGT+AGG + chr1_3:64720456-64720475 None:intergenic 45.0%
! GTTGTTATGTGCCACTATCG+TGG - chr1_3:64720459-64720478 Msa0133460:intron 45.0%
CTTTCTCAGACCATGGATGA+AGG - chr1_3:64720578-64720597 Msa0133460:intron 45.0%
! GTGAAAGTTAGTGGACAGAC+TGG + chr1_3:64720795-64720814 None:intergenic 45.0%
CCACTAATTCCCTTCACTTG+TGG + chr1_3:64721380-64721399 None:intergenic 45.0%
CCACAAGTGAAGGGAATTAG+TGG - chr1_3:64721377-64721396 Msa0133460:intron 45.0%
TGTGGCCAAAAGAGAATCAC+AGG - chr1_3:64721421-64721440 Msa0133460:intron 45.0%
GTGGCCAAAAGAGAATCACA+GGG - chr1_3:64721422-64721441 Msa0133460:intron 45.0%
! CCTTCCCTGTGATTCTCTTT+TGG + chr1_3:64721429-64721448 None:intergenic 45.0%
CCAAAAGAGAATCACAGGGA+AGG - chr1_3:64721426-64721445 Msa0133460:intron 45.0%
!! GTTTTAACCCACGTCTCCAA+TGG - chr1_3:64721649-64721668 Msa0133460:intron 45.0%
CAACAGTGAAGACGACTTAG+AGG + chr1_3:64721739-64721758 None:intergenic 45.0%
GACAATCATGACGGTGATGA+CGG + chr1_3:64721935-64721954 None:intergenic 45.0%
CACGGAAACAACAACAGTGA+TGG + chr1_3:64721980-64721999 None:intergenic 45.0%
! TGTTTGGACCCTTTTGCAAG+AGG + chr1_3:64722284-64722303 None:intergenic 45.0%
! CTTTTGCTGCATTAAGCGTC+TGG + chr1_3:64722526-64722545 None:intergenic 45.0%
TGTCCTCTTGTCCTGAAAGT+GGG + chr1_3:64722591-64722610 None:intergenic 45.0%
TTGTCCTCTTGTCCTGAAAG+TGG + chr1_3:64722592-64722611 None:intergenic 45.0%
TTCAGGACAAGAGGACAACT+AGG - chr1_3:64722594-64722613 Msa0133460:intron 45.0%
TCAGGACAAGAGGACAACTA+GGG - chr1_3:64722595-64722614 Msa0133460:intron 45.0%
!! TATGGTTCGGTTCGGTTAAC+CGG + chr1_3:64722652-64722671 None:intergenic 45.0%
GTCCCTGAAGAGGAGAAATT+AGG + chr1_3:64722908-64722927 None:intergenic 45.0%
GCAGAAGAGTGAATTGAGTG+AGG + chr1_3:64722960-64722979 None:intergenic 45.0%
CGCATAAGAGTTCGAAGAAG+AGG + chr1_3:64723087-64723106 None:intergenic 45.0%
! TTCATCGAAGTGGAAGTGTG+TGG - chr1_3:64723977-64723996 Msa0133460:intron 45.0%
TCCAGAAATGCCACTAAGTG+GGG + chr1_3:64724165-64724184 None:intergenic 45.0%
!! TCACAAGAGCGCACATCTTT+TGG + chr1_3:64725108-64725127 None:intergenic 45.0%
!! CGGTTCGGTTTAGTTTGCTT+CGG + chr1_3:64725197-64725216 None:intergenic 45.0%
ACCGCGAAAGCTATAGAAAG+AGG - chr1_3:64725213-64725232 Msa0133460:CDS 45.0%
!! TTCGGTTCGGTTCGGTTAAT+AGG - chr1_3:64725785-64725804 Msa0133460:intron 45.0%
! GGTTAGCTCCATACCTGAAA+CGG - chr1_3:64725848-64725867 Msa0133460:intron 45.0%
! GAACCAAACCGTTTCAGGTA+TGG + chr1_3:64725859-64725878 None:intergenic 45.0%
AAACCGAACCAAACCGTTTC+AGG + chr1_3:64725864-64725883 None:intergenic 45.0%
!! AATTTCGGTTCGGTTCGGTT+CGG - chr1_3:64725900-64725919 Msa0133460:intron 45.0%
!!! TCGGTTCGGTTCGGTTTTTT+AGG - chr1_3:64725909-64725928 Msa0133460:intron 45.0%
GATGGAATGGTTGTCCTTAG+GGG + chr1_3:64725953-64725972 None:intergenic 45.0%
!! CAATGGGTTGGAGCAGAAAT+TGG + chr1_3:64725988-64726007 None:intergenic 45.0%
!! TTGAATGTGTGAGGCGTTGT+CGG + chr1_3:64726110-64726129 None:intergenic 45.0%
GCCTCACACATTCAAGATCA+TGG - chr1_3:64726115-64726134 Msa0133460:intron 45.0%
ACTGCTGAACAAGTCACTCA+TGG - chr1_3:64726293-64726312 Msa0133460:intron 45.0%
ACTCATGGAATCGATGCAAC+TGG - chr1_3:64726308-64726327 Msa0133460:intron 45.0%
GGAGGAAAGAACAGTGACAA+TGG + chr1_3:64726351-64726370 None:intergenic 45.0%
!! GAGTTGGTAGGTAACCCATT+TGG + chr1_3:64726426-64726445 None:intergenic 45.0%
CGCGGTGTCCATATGATTAT+GGG - chr1_3:64727062-64727081 Msa0133460:intron 45.0%
CATGGCATCAAGTTTAGCAG+AGG + chr1_3:64727142-64727161 None:intergenic 45.0%
CTCTGCTAAACTTGATGCCA+TGG - chr1_3:64727140-64727159 Msa0133460:intron 45.0%
TGAGCTGAGATCTAACTCCA+TGG + chr1_3:64727160-64727179 None:intergenic 45.0%
GGAGTTAGATCTCAGCTCAT+TGG - chr1_3:64727161-64727180 Msa0133460:intron 45.0%
ATGTGGCCATTCAGCAAGAA+AGG - chr1_3:64727548-64727567 Msa0133460:intron 45.0%
TGTGGCCATTCAGCAAGAAA+GGG - chr1_3:64727549-64727568 Msa0133460:intron 45.0%
GAAACCCCTTTCTTGCTGAA+TGG + chr1_3:64727557-64727576 None:intergenic 45.0%
TTCAGCAAGAAAGGGGTTTC+TGG - chr1_3:64727557-64727576 Msa0133460:intron 45.0%
! AAAGGGGTTTCTGGATTCTC+AGG - chr1_3:64727566-64727585 Msa0133460:intron 45.0%
! AAGGGGTTTCTGGATTCTCA+GGG - chr1_3:64727567-64727586 Msa0133460:intron 45.0%
AGTCTCAACTCCAATACCAC+TGG + chr1_3:64718051-64718070 None:intergenic 45.0%
GATGTTCAATGGAAGACCAG+AGG + chr1_3:64728195-64728214 None:intergenic 45.0%
TATCCAGGCAAAACTGCACT+AGG - chr1_3:64728259-64728278 Msa0133460:intron 45.0%
! AATCCTAGTGCAGTTTTGCC+TGG + chr1_3:64728265-64728284 None:intergenic 45.0%
CTCAGATTCGAATCCTTCTG+TGG + chr1_3:64728394-64728413 None:intergenic 45.0%
! TTCGAATCTGAGACTTTGCG+AGG - chr1_3:64728402-64728421 Msa0133460:intron 45.0%
ATAAGGAAACCCCCAATGGT+TGG + chr1_3:64728463-64728482 None:intergenic 45.0%
! GCACATGGGTCCTTTAACTT+AGG + chr1_3:64728796-64728815 None:intergenic 45.0%
CTACAAACCACCTAGGTATG+TGG - chr1_3:64729014-64729033 Msa0133460:intron 45.0%
! TCACGACAAGATGTGCTGTT+AGG - chr1_3:64729384-64729403 Msa0133460:intron 45.0%
TACAGCAAATGGGGTGCATA+TGG - chr1_3:64729483-64729502 Msa0133460:intron 45.0%
ACATCTTGATCAGGCTGATG+GGG - chr1_3:64720257-64720276 Msa0133460:intron 45.0%
ACCAATCTTTCCCGCCATAT+GGG - chr1_3:64720321-64720340 Msa0133460:intron 45.0%
CACTAACTCCCTTCACTTGT+GGG + chr1_3:64730227-64730246 None:intergenic 45.0%
TGTGGCCAAAAGAGAATCAC+AGG - chr1_3:64721421-64721440 Msa0133460:intron 45.0%
GTGGCCAAAAGAGAATCACA+GGG - chr1_3:64721422-64721441 Msa0133460:intron 45.0%
! CCTTCCCTGTGATTCTCTTT+TGG + chr1_3:64721429-64721448 None:intergenic 45.0%
CCAAAAGAGAATCACAGGGA+AGG - chr1_3:64721426-64721445 Msa0133460:intron 45.0%
GGTGGAGTTTAACATGGGAA+AGG - chr1_3:64730645-64730664 Msa0133460:intron 45.0%
AACTCCAATTGACCCATGGT+GGG + chr1_3:64730681-64730700 None:intergenic 45.0%
AAACTCCAATTGACCCATGG+TGG + chr1_3:64730682-64730701 None:intergenic 45.0%
!! TGATATAGGAGTGTTGGTGG+TGG + chr1_3:64730850-64730869 None:intergenic 45.0%
!! CTGTGATATAGGAGTGTTGG+TGG + chr1_3:64730853-64730872 None:intergenic 45.0%
! AGCCATTGGAGATGATAGTG+AGG - chr1_3:64731307-64731326 Msa0133460:intron 45.0%
! GATGATAGTGAGGTTGGTTG+TGG - chr1_3:64731317-64731336 Msa0133460:intron 45.0%
GAGAGAAACGTGAGTGAGAA+TGG - chr1_3:64731369-64731388 Msa0133460:intron 45.0%
GAAACGTGAGTGAGAATGGT+TGG - chr1_3:64731373-64731392 Msa0133460:intron 45.0%
AACGTGAGTGAGAATGGTTG+GGG - chr1_3:64731375-64731394 Msa0133460:intron 45.0%
! GGGTAATCTTTTCCCACCAT+GGG + chr1_3:64731485-64731504 None:intergenic 45.0%
! AGGGTAATCTTTTCCCACCA+TGG + chr1_3:64731486-64731505 None:intergenic 45.0%
GGTGGAGTTTAACATGGGAA+AGG + chr1_3:64730645-64730664 None:intergenic 45.0%
TAAGGACCCCTATTTCATGG+TGG + chr1_3:64731524-64731543 None:intergenic 45.0%
AACGGAGGGAGTAGTAGATA+AGG + chr1_3:64732430-64732449 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr1_3:64732834-64732853 Msa0133460:intron 45.0%
TGATCTTGATCGGGTGAACT+GGG + chr1_3:64732997-64733016 None:intergenic 45.0%
TTGATCTTGATCGGGTGAAC+TGG + chr1_3:64732998-64733017 None:intergenic 45.0%
!!! CAAGGTTGCTTTTCTCACCT+TGG - chr1_3:64733421-64733440 Msa0133460:five_prime_UTR 45.0%
! TGCCATAGCTTGTGTGACAT+TGG - chr1_3:64733747-64733766 Msa0133460:intron 45.0%
CACCAATGTCACACAAGCTA+TGG + chr1_3:64733752-64733771 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG + chr1_3:64733808-64733827 None:intergenic 45.0%
TTGATGTGTGTGGATGTGTG+TGG + chr1_3:64733809-64733828 None:intergenic 45.0%
CACACATCCACACACATCAA+TGG - chr1_3:64733809-64733828 Msa0133460:intron 45.0%
ATTCTGGCCATTGATGTGTG+TGG + chr1_3:64733819-64733838 None:intergenic 45.0%
AATGGCCAGAATTTCCCCAA+TGG - chr1_3:64733827-64733846 Msa0133460:intron 45.0%
AATTTCCCCAATGGCACCAA+TGG - chr1_3:64733836-64733855 Msa0133460:intron 45.0%
! TGACATAGCTTGTGTGCCAT+TGG + chr1_3:64733855-64733874 None:intergenic 45.0%
ATGGCACACAAGCTATGTCA+TGG - chr1_3:64733855-64733874 Msa0133460:intron 45.0%
! TTTGGAACACGACCTACGTT+CGG + chr1_3:64733890-64733909 None:intergenic 45.0%
ACGTAGGTCGTGTTCCAAAT+TGG - chr1_3:64733891-64733910 Msa0133460:intron 45.0%
CAGGATATCCTCATCATACC+AGG + chr1_3:64734298-64734317 None:intergenic 45.0%
GATGGTTATCATGGATGTGC+AGG + chr1_3:64734725-64734744 None:intergenic 45.0%
AAAGGCGGCACATATTGAGA+TGG + chr1_3:64734743-64734762 None:intergenic 45.0%
AGAAGAAGGAGAAGACGAAG+AGG + chr1_3:64734850-64734869 None:intergenic 45.0%
!! AGCTGGGTGTGATTTTCAAG+TGG + chr1_3:64735309-64735328 None:intergenic 45.0%
CGAAGTTGAGATCTCATAGC+TGG + chr1_3:64735326-64735345 None:intergenic 45.0%
!!! CACTGTTGTTTTGTGACGCA+CGG - chr1_3:64735964-64735983 Msa0133460:intron 45.0%
GGCAAAGATACCCATATCCA+CGG - chr1_3:64736022-64736041 Msa0133460:intron 45.0%
!! GTGGGTATTGAGGTATCCAT+GGG + chr1_3:64736309-64736328 None:intergenic 45.0%
CATGGATACCTCAATACCCA+CGG - chr1_3:64736308-64736327 Msa0133460:five_prime_UTR 45.0%
ATGGATACCTCAATACCCAC+GGG - chr1_3:64736309-64736328 Msa0133460:five_prime_UTR 45.0%
ATCATATCTATCCAACGGGG+CGG - chr1_3:64736377-64736396 Msa0133460:five_prime_UTR 45.0%
CCATCGTTTAGGGATGTCAA+TGG + chr1_3:64736436-64736455 None:intergenic 45.0%
CCATTGACATCCCTAAACGA+TGG - chr1_3:64736433-64736452 Msa0133460:five_prime_UTR 45.0%
! GGTATAATTGTAGGGGTGTG+GGG + chr1_3:64736467-64736486 None:intergenic 45.0%
! TGAGGATTTTTCTGGGTCAG+TGG - chr1_3:64736705-64736724 Msa0133460:intron 45.0%
! GGGTTGATTCTTCCCGAAAT+TGG - chr1_3:64736792-64736811 Msa0133460:intron 45.0%
GGTTCGATCCAATAGTGAGA+AGG + chr1_3:64737121-64737140 None:intergenic 45.0%
GATCGAACCATCTGAGAGTT+TGG - chr1_3:64737132-64737151 Msa0133460:five_prime_UTR 45.0%
GTTCACCGCACCTGATATAA+AGG + chr1_3:64737238-64737257 None:intergenic 45.0%
TGTAATAGAGGATGGACCAG+TGG + chr1_3:64737410-64737429 None:intergenic 45.0%
! GCATGGAGAGATACCCTTTT+GGG + chr1_3:64737491-64737510 None:intergenic 45.0%
! TGCATGGAGAGATACCCTTT+TGG + chr1_3:64737492-64737511 None:intergenic 45.0%
AAGATGTGTGGAAGTGGAAG+TGG + chr1_3:64737631-64737650 None:intergenic 45.0%
!! AAATATCGGGCTAGCGGAAT+TGG + chr1_3:64737840-64737859 None:intergenic 45.0%
!! AAATGAAAAAAATAAAAAAA+TGG + chr1_3:64717737-64717756 None:intergenic 5.0%
!! ATTTATTCTTTAATATTTAT+TGG + chr1_3:64725421-64725440 None:intergenic 5.0%
!!! AAAATGAAATTTTTTAAAAA+TGG + chr1_3:64727682-64727701 None:intergenic 5.0%
!! TAATTGAATATTATTAATTA+AGG + chr1_3:64733559-64733578 None:intergenic 5.0%
!! ATCAAAATAAAAATAAATAT+TGG - chr1_3:64734532-64734551 Msa0133460:intron 5.0%
CTTCCTGAATGGCCACATGA+TGG + chr1_3:64717602-64717621 None:intergenic 50.0%
GGTCTCACTGCTATTGTCAC+TGG - chr1_3:64717688-64717707 Msa0133460:intron 50.0%
ATGGTAACAGGAGCAACCAG+TGG - chr1_3:64718032-64718051 Msa0133460:intron 50.0%
ACAGGAGCAACCAGTGGTAT+TGG - chr1_3:64718038-64718057 Msa0133460:intron 50.0%
GCGTGGTGTCCATGTGATTA+TGG - chr1_3:64718088-64718107 Msa0133460:intron 50.0%
GCATCCGAATTCAACTCCTC+TGG - chr1_3:64718230-64718249 Msa0133460:intron 50.0%
GATGTTCAACGGAAGACCAG+AGG + chr1_3:64718249-64718268 None:intergenic 50.0%
GATGGTACTGCGATCCATGT+CGG + chr1_3:64718290-64718309 None:intergenic 50.0%
! TAAGTTAACGGACCCAGGTG+CGG - chr1_3:64718677-64718696 Msa0133460:intron 50.0%
TAAAAGGCGAATCCGCACCT+GGG + chr1_3:64718692-64718711 None:intergenic 50.0%
ATAAAAGGCGAATCCGCACC+TGG + chr1_3:64718693-64718712 None:intergenic 50.0%
CATCACAGTTGCTCCCACAT+AGG + chr1_3:64719270-64719289 None:intergenic 50.0%
ACGACTCCATCGTTATCAGC+AGG + chr1_3:64719946-64719965 None:intergenic 50.0%
CACCAATCTTTCCCGCCATA+TGG - chr1_3:64720320-64720339 Msa0133460:intron 50.0%
! ACCCATATGGCGGGAAAGAT+TGG + chr1_3:64720325-64720344 None:intergenic 50.0%
! GTGGATTACACCCATATGGC+GGG + chr1_3:64720334-64720353 None:intergenic 50.0%
! CGTGGATTACACCCATATGG+CGG + chr1_3:64720335-64720354 None:intergenic 50.0%
CGCCATATGGGTGTAATCCA+CGG - chr1_3:64720333-64720352 Msa0133460:intron 50.0%
GCTGCCCCCTACATTTAGAT+AGG + chr1_3:64721332-64721351 None:intergenic 50.0%
AGCATTGCACCCACAAGTGA+AGG - chr1_3:64721367-64721386 Msa0133460:intron 50.0%
GCATTGCACCCACAAGTGAA+GGG - chr1_3:64721368-64721387 Msa0133460:intron 50.0%
ACGCAAACCATTGGAGACGT+GGG + chr1_3:64721659-64721678 None:intergenic 50.0%
AAGATGGGGACGCAAACCAT+TGG + chr1_3:64721668-64721687 None:intergenic 50.0%
TGCGGTGAAGACAAATGCGA+CGG + chr1_3:64721823-64721842 None:intergenic 50.0%
! GTTGTTTCCGTGACTCTCAG+CGG - chr1_3:64721988-64722007 Msa0133460:intron 50.0%
TGCAAGTGGGAAAGGGACTT+CGG - chr1_3:64722014-64722033 Msa0133460:intron 50.0%
GGTGGCGTGCATATAAGAGA+AGG - chr1_3:64722038-64722057 Msa0133460:intron 50.0%
AACCCCACTTTCAGGACAAG+AGG - chr1_3:64722585-64722604 Msa0133460:intron 50.0%
GTCCTCTTGTCCTGAAAGTG+GGG + chr1_3:64722590-64722609 None:intergenic 50.0%
CAGGACAAGAGGACAACTAG+GGG - chr1_3:64722596-64722615 Msa0133460:intron 50.0%
ACAAGAGGACAACTAGGGGT+GGG - chr1_3:64722600-64722619 Msa0133460:intron 50.0%
GAAATGCCACTAAGTGGGGT+CGG + chr1_3:64724161-64724180 None:intergenic 50.0%
ACCCCACTTAGTGGCATTTC+TGG - chr1_3:64724161-64724180 Msa0133460:intron 50.0%
! TGACTTGGATCGGATCGGAT+CGG - chr1_3:64725156-64725175 Msa0133460:intron 50.0%
!!! GGTTTTGGTTCGGTTCGGTT+CGG - chr1_3:64725777-64725796 Msa0133460:intron 50.0%
GCTCCATACCTGAAACGGTT+TGG - chr1_3:64725853-64725872 Msa0133460:intron 50.0%
GAATGGTTGTCCTTAGGGGT+GGG + chr1_3:64725949-64725968 None:intergenic 50.0%
AATTGGTGAGGCAGGGTTGA+TGG + chr1_3:64725971-64725990 None:intergenic 50.0%
GAGCAGAAATTGGTGAGGCA+GGG + chr1_3:64725978-64725997 None:intergenic 50.0%
GGTTGGAGCAGAAATTGGTG+AGG + chr1_3:64725983-64726002 None:intergenic 50.0%
CGTGTGTCACAATGCAATGG+CGG + chr1_3:64726213-64726232 None:intergenic 50.0%
CGCCATTGCATTGTGACACA+CGG - chr1_3:64726211-64726230 Msa0133460:intron 50.0%
TGCCGTGTGTCACAATGCAA+TGG + chr1_3:64726216-64726235 None:intergenic 50.0%
CACACGGCATCATCATCATG+TGG - chr1_3:64726227-64726246 Msa0133460:intron 50.0%
GAACAGTGACAATGGCAGTG+AGG + chr1_3:64726343-64726362 None:intergenic 50.0%
TGTGCTCCTAGCTAAAGAGG+AGG + chr1_3:64726369-64726388 None:intergenic 50.0%
GAGTGTGCTCCTAGCTAAAG+AGG + chr1_3:64726372-64726391 None:intergenic 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + chr1_3:64726401-64726420 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + chr1_3:64726402-64726421 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + chr1_3:64726407-64726426 None:intergenic 50.0%
TACCACTAGGCCAACCCAAA+TGG - chr1_3:64726408-64726427 Msa0133460:CDS 50.0%
ACCACTAGGCCAACCCAAAT+GGG - chr1_3:64726409-64726428 Msa0133460:CDS 50.0%
GGTAGGTAACCCATTTGGGT+TGG + chr1_3:64726421-64726440 None:intergenic 50.0%
GACTGTAATTGTGGCCGCAA+TGG - chr1_3:64726828-64726847 Msa0133460:intron 50.0%
!! GTGGTAATAGGAGCATCCAG+CGG - chr1_3:64727005-64727024 Msa0133460:intron 50.0%
GCGCGGTGTCCATATGATTA+TGG - chr1_3:64727061-64727080 Msa0133460:intron 50.0%
GTGGCCATTCAGCAAGAAAG+GGG - chr1_3:64727550-64727569 Msa0133460:intron 50.0%
GACCAGTGACAATAGCAGTG+AGG + chr1_3:64717693-64717712 None:intergenic 50.0%
!! ATGGTAACAGGAGCATCCAG+TGG - chr1_3:64727978-64727997 Msa0133460:intron 50.0%
!! ACAGGAGCATCCAGTGGTAT+TGG - chr1_3:64727984-64728003 Msa0133460:intron 50.0%
ATGCGTGTTCTTGCTTTGCG+TGG - chr1_3:64728017-64728036 Msa0133460:intron 50.0%
GCGTGGTGTCCATGTGATTA+TGG - chr1_3:64718088-64718107 Msa0133460:intron 50.0%
CTTCTGTGGGCAACTTCTGT+GGG + chr1_3:64728380-64728399 None:intergenic 50.0%
TTTGCGAGGAGCTCACTTCA+AGG - chr1_3:64728416-64728435 Msa0133460:intron 50.0%
GGTCTTAAGCCTACACCACT+AGG - chr1_3:64728437-64728456 Msa0133460:intron 50.0%
!! AATGGTTGGCCTAGTGGTGT+AGG + chr1_3:64728449-64728468 None:intergenic 50.0%
TACACCACTAGGCCAACCAT+TGG - chr1_3:64728448-64728467 Msa0133460:intron 50.0%
ACACCACTAGGCCAACCATT+GGG - chr1_3:64728449-64728468 Msa0133460:intron 50.0%
CACCAATCTTTCCCGCCATA+TGG - chr1_3:64720320-64720339 Msa0133460:intron 50.0%
! ACCCATATGGCGGGAAAGAT+TGG + chr1_3:64720325-64720344 None:intergenic 50.0%
TACCGTCGAGTACACCCATA+TGG + chr1_3:64729715-64729734 None:intergenic 50.0%
GCTGCCCCCTACATTTAGAT+AGG + chr1_3:64721332-64721351 None:intergenic 50.0%
AGCATTGCACCCACAAGTGA+AGG - chr1_3:64721367-64721386 Msa0133460:intron 50.0%
GCATTGCACCCACAAGTGAA+GGG - chr1_3:64721368-64721387 Msa0133460:intron 50.0%
CCACTAACTCCCTTCACTTG+TGG + chr1_3:64730228-64730247 None:intergenic 50.0%
CCACAAGTGAAGGGAGTTAG+TGG - chr1_3:64730225-64730244 Msa0133460:intron 50.0%
AGGGTAATCCTTTCCCACCA+TGG - chr1_3:64730665-64730684 Msa0133460:intron 50.0%
GGGTAATCCTTTCCCACCAT+GGG - chr1_3:64730666-64730685 Msa0133460:intron 50.0%
! CAATTGACCCATGGTGGGAA+AGG + chr1_3:64730676-64730695 None:intergenic 50.0%
CTTTCCCACCATGGGTCAAT+TGG - chr1_3:64730674-64730693 Msa0133460:intron 50.0%
!! TGACGGGTTGCTATGGTGTA+GGG + chr1_3:64730819-64730838 None:intergenic 50.0%
!! ATGACGGGTTGCTATGGTGT+AGG + chr1_3:64730820-64730839 None:intergenic 50.0%
!! TATAGGAGTGTTGGTGGTGG+TGG + chr1_3:64730847-64730866 None:intergenic 50.0%
! AGTGAGGTTGGTTGTGGTTG+TGG - chr1_3:64731323-64731342 Msa0133460:intron 50.0%
TGTGGATGAGTTGCTGCAAG+TGG - chr1_3:64731341-64731360 Msa0133460:intron 50.0%
GATGAGTTGCTGCAAGTGGT+GGG - chr1_3:64731345-64731364 Msa0133460:intron 50.0%
GTGAGAATGGTTGGGGAAGA+TGG - chr1_3:64731382-64731401 Msa0133460:intron 50.0%
TTTACCTCGTGCGACGCATA+CGG + chr1_3:64732098-64732117 None:intergenic 50.0%
! TTTTCATTGCCTTGGCGCCA+AGG + chr1_3:64733441-64733460 None:intergenic 50.0%
GGAGAATGTACAGGAGAGTC+TGG - chr1_3:64733693-64733712 Msa0133460:intron 50.0%
GAATGTACAGGAGAGTCTGG+AGG - chr1_3:64733696-64733715 Msa0133460:intron 50.0%
CACAAGCTATGGCACCAAAG+TGG + chr1_3:64733741-64733760 None:intergenic 50.0%
! TGTGGTGGAGATGCAAGCTA+TGG + chr1_3:64733775-64733794 None:intergenic 50.0%
GATGTGTGTGGATGTGTGTG+GGG + chr1_3:64733807-64733826 None:intergenic 50.0%
!! TGGTGCCATTGGGGAAATTC+TGG + chr1_3:64733835-64733854 None:intergenic 50.0%
!! TGTGTGCCATTGGTGCCATT+GGG + chr1_3:64733845-64733864 None:intergenic 50.0%
!! TTGTGTGCCATTGGTGCCAT+TGG + chr1_3:64733846-64733865 None:intergenic 50.0%
TGAGGTGGTCATGAAGAGGA+TGG + chr1_3:64734620-64734639 None:intergenic 50.0%
CTACTGAGGTGGTCATGAAG+AGG + chr1_3:64734624-64734643 None:intergenic 50.0%
CTCTTCATGACCACCTCAGT+AGG - chr1_3:64734622-64734641 Msa0133460:intron 50.0%
GAAGGAGAAGACGAAGAGGA+AGG + chr1_3:64734846-64734865 None:intergenic 50.0%
! TTTTGTGACGCACGGCAGAA+AGG - chr1_3:64735972-64735991 Msa0133460:intron 50.0%
TCACTCGTGTAAACTAGGGG+TGG - chr1_3:64736001-64736020 Msa0133460:intron 50.0%
CAAAACTCCATGGGTACCCA+TGG - chr1_3:64736290-64736309 Msa0133460:five_prime_UTR 50.0%
!! CGTGGGTATTGAGGTATCCA+TGG + chr1_3:64736310-64736329 None:intergenic 50.0%
TCATATCTATCCAACGGGGC+GGG - chr1_3:64736378-64736397 Msa0133460:five_prime_UTR 50.0%
GGTAGGGGTGAACAAGTGAA+TGG + chr1_3:64736559-64736578 None:intergenic 50.0%
! TTGAGTTTTCACCCCAGCGA+AGG + chr1_3:64736597-64736616 None:intergenic 50.0%
TGCGGTGAACTCATACCGAA+TGG - chr1_3:64737248-64737267 Msa0133460:five_prime_UTR 50.0%
GCGGTGAACTCATACCGAAT+GGG - chr1_3:64737249-64737268 Msa0133460:five_prime_UTR 50.0%
CGGTGAACTCATACCGAATG+GGG - chr1_3:64737250-64737269 Msa0133460:five_prime_UTR 50.0%
GAGGCCAGATGCATCGTTTA+GGG + chr1_3:64737377-64737396 None:intergenic 50.0%
TGAGGCCAGATGCATCGTTT+AGG + chr1_3:64737378-64737397 None:intergenic 50.0%
TGTGGAAGTGGAAGTGGAAG+TGG + chr1_3:64737625-64737644 None:intergenic 50.0%
TTCAGGGCTAACCATGCCAC+TGG + chr1_3:64716570-64716589 None:intergenic 55.0%
!! TGCTGGAAGAGCACTTGCTG+TGG - chr1_3:64717000-64717019 Msa0133460:intron 55.0%
ACGCGTGTTCTTGCTTTGCG+TGG - chr1_3:64718071-64718090 Msa0133460:intron 55.0%
! GAGGCGTCTTGCAAGCTCAT+TGG + chr1_3:64720161-64720180 None:intergenic 55.0%
TGAGCTTGCAAGACGCCTCA+AGG - chr1_3:64720162-64720181 Msa0133460:intron 55.0%
TCTTGATCAGGCTGATGGGG+TGG - chr1_3:64720260-64720279 Msa0133460:intron 55.0%
! ACAGGGAAGGGACGCTGATT+TGG - chr1_3:64721439-64721458 Msa0133460:intron 55.0%
GACGCAAACCATTGGAGACG+TGG + chr1_3:64721660-64721679 None:intergenic 55.0%
TGCAACTCCGCTGAGAGTCA+CGG + chr1_3:64721998-64722017 None:intergenic 55.0%
ACTCTCAGCGGAGTTGCAAG+TGG - chr1_3:64722000-64722019 Msa0133460:intron 55.0%
CTCTCAGCGGAGTTGCAAGT+GGG - chr1_3:64722001-64722020 Msa0133460:intron 55.0%
AGCGGAGTTGCAAGTGGGAA+AGG - chr1_3:64722006-64722025 Msa0133460:intron 55.0%
GCGGAGTTGCAAGTGGGAAA+GGG - chr1_3:64722007-64722026 Msa0133460:intron 55.0%
AAGTGGGAAAGGGACTTCGG+TGG - chr1_3:64722017-64722036 Msa0133460:intron 55.0%
GACAAGAGGACAACTAGGGG+TGG - chr1_3:64722599-64722618 Msa0133460:intron 55.0%
TCCTCTTCAGGGACCAGTGA+TGG - chr1_3:64722914-64722933 Msa0133460:intron 55.0%
ACCATCACTGGTCCCTGAAG+AGG + chr1_3:64722918-64722937 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_3:64724152-64724171 Msa0133460:intron 55.0%
GGAATGGTTGTCCTTAGGGG+TGG + chr1_3:64725950-64725969 None:intergenic 55.0%
!! GTGAGGCAGGGTTGATGGAA+TGG + chr1_3:64725966-64725985 None:intergenic 55.0%
GGAGCAGAAATTGGTGAGGC+AGG + chr1_3:64725979-64725998 None:intergenic 55.0%
ATCGATGCAACTGGCCAGTC+TGG - chr1_3:64726317-64726336 Msa0133460:intron 55.0%
! TTAGCTAGGAGCACACTCCC+AGG - chr1_3:64726374-64726393 Msa0133460:CDS 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG + chr1_3:64726394-64726413 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG + chr1_3:64726395-64726414 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG - chr1_3:64726395-64726414 Msa0133460:CDS 55.0%
!! ACCCATTTGGGTTGGCCTAG+TGG + chr1_3:64726413-64726432 None:intergenic 55.0%
!! ATAGGAGCATCCAGCGGCAT+TGG - chr1_3:64727011-64727030 Msa0133460:intron 55.0%
ACTCGTGTGCTTGCTTTGCG+CGG - chr1_3:64727044-64727063 Msa0133460:intron 55.0%
GGCCTCACTGCTATTGTCAC+TGG - chr1_3:64727632-64727651 Msa0133460:intron 55.0%
!! AAGGAACTGGCTTGGATCCC+AGG - chr1_3:64728227-64728246 Msa0133460:intron 55.0%
CCTTCTGTGGGCAACTTCTG+TGG + chr1_3:64728381-64728400 None:intergenic 55.0%
CCACAGAAGTTGCCCACAGA+AGG - chr1_3:64728378-64728397 Msa0133460:intron 55.0%
CACCACTAGGCCAACCATTG+GGG - chr1_3:64728450-64728469 Msa0133460:intron 55.0%
ACCACTAGGCCAACCATTGG+GGG - chr1_3:64728451-64728470 Msa0133460:intron 55.0%
! GAGGCGTCTTGCAAGCTCAT+TGG + chr1_3:64720161-64720180 None:intergenic 55.0%
TGAGCTTGCAAGACGCCTCA+AGG - chr1_3:64720162-64720181 Msa0133460:intron 55.0%
TCTTGATCAGGCTGATGGGG+TGG - chr1_3:64720260-64720279 Msa0133460:intron 55.0%
GTCGAGTACACCCATATGGC+GGG + chr1_3:64729711-64729730 None:intergenic 55.0%
CGTCGAGTACACCCATATGG+CGG + chr1_3:64729712-64729731 None:intergenic 55.0%
CGCCATATGGGTGTACTCGA+CGG - chr1_3:64729710-64729729 Msa0133460:intron 55.0%
! ACAGGGAAGGGACGCTGATT+TGG - chr1_3:64721439-64721458 Msa0133460:intron 55.0%
!! GGACTGATGACGGGTTGCTA+TGG + chr1_3:64730826-64730845 None:intergenic 55.0%
!! TGGTGGTGGTGGACTGATGA+CGG + chr1_3:64730836-64730855 None:intergenic 55.0%
TTTCCTGACGGGAATGGCAG+TGG - chr1_3:64731046-64731065 Msa0133460:intron 55.0%
ATACCACTGCCATTCCCGTC+AGG + chr1_3:64731052-64731071 None:intergenic 55.0%
GGATGAGTTGCTGCAAGTGG+TGG - chr1_3:64731344-64731363 Msa0133460:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_3:64732832-64732851 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_3:64732829-64732848 Msa0133460:intron 55.0%
TGGTGGTTGGGGTTTGAACC+CGG + chr1_3:64732883-64732902 None:intergenic 55.0%
! CTTTTCTCACCTTGGCGCCA+AGG - chr1_3:64733429-64733448 Msa0133460:intron 55.0%
GGCGCCAAGGCAATGAAAAG+AGG - chr1_3:64733442-64733461 Msa0133460:intron 55.0%
TGTACATTCTCCGCGTCCCA+CGG + chr1_3:64733685-64733704 None:intergenic 55.0%
TGTACAGGAGAGTCTGGAGG+AGG - chr1_3:64733699-64733718 Msa0133460:intron 55.0%
GTACAGGAGAGTCTGGAGGA+GGG - chr1_3:64733700-64733719 Msa0133460:intron 55.0%
TACAGGAGAGTCTGGAGGAG+GGG - chr1_3:64733701-64733720 Msa0133460:intron 55.0%
GAACGTAGGGGACTCCACTT+TGG - chr1_3:64733724-64733743 Msa0133460:intron 55.0%
TGTGTGGGGATGTGTGTGTG+TGG + chr1_3:64733793-64733812 None:intergenic 55.0%
!! GTGTGCCATTGGTGCCATTG+GGG + chr1_3:64733844-64733863 None:intergenic 55.0%
!! GATTTTACCCACGGGTACCG+TGG + chr1_3:64736042-64736061 None:intergenic 55.0%
! GAGGTATCCATGGGTACCCA+TGG + chr1_3:64736300-64736319 None:intergenic 55.0%
ACCCACGGGTACCCGTATAA+TGG - chr1_3:64736323-64736342 Msa0133460:five_prime_UTR 55.0%
CCCATTATACGGGTACCCGT+GGG + chr1_3:64736327-64736346 None:intergenic 55.0%
CCCACGGGTACCCGTATAAT+GGG - chr1_3:64736324-64736343 Msa0133460:five_prime_UTR 55.0%
CATATCTATCCAACGGGGCG+GGG - chr1_3:64736379-64736398 Msa0133460:five_prime_UTR 55.0%
GACCAGTGGCAACGTCAATG+AGG + chr1_3:64737396-64737415 None:intergenic 55.0%
TGGGAAAGGGACTTCGGTGG+TGG - chr1_3:64722020-64722039 Msa0133460:intron 60.0%
TGGTCGCTGGTCGCTGAAGT+GGG + chr1_3:64722989-64723008 None:intergenic 60.0%
ATGGTCGCTGGTCGCTGAAG+TGG + chr1_3:64722990-64723009 None:intergenic 60.0%
GCTCACTGGTCAATGGTCGC+TGG + chr1_3:64723002-64723021 None:intergenic 60.0%
CCTTAGGGGTGGGCATGGTT+CGG + chr1_3:64725939-64725958 None:intergenic 60.0%
GTTGTCCTTAGGGGTGGGCA+TGG + chr1_3:64725944-64725963 None:intergenic 60.0%
CAATGGCAGTGAGGCCAGAC+TGG + chr1_3:64726334-64726353 None:intergenic 60.0%
!! ACCCCCAATGGTTGGCCTAG+TGG + chr1_3:64728455-64728474 None:intergenic 60.0%
!! GGTGGTGGTGGACTGATGAC+GGG + chr1_3:64730835-64730854 None:intergenic 60.0%
GTGGGACGCGGAGAATGTAC+AGG - chr1_3:64733684-64733703 Msa0133460:intron 60.0%
ACAGGAGAGTCTGGAGGAGG+GGG - chr1_3:64733702-64733721 Msa0133460:intron 60.0%
TCTGGAGGAGGGGGAACGTA+GGG - chr1_3:64733711-64733730 Msa0133460:intron 60.0%
GTGGGGATGTGTGTGTGTGG+TGG + chr1_3:64733790-64733809 None:intergenic 60.0%
ACCCATATCCACGGTACCCG+TGG - chr1_3:64736031-64736050 Msa0133460:intron 60.0%
! CCCACGGGTACCGTGGATAT+GGG + chr1_3:64736035-64736054 None:intergenic 60.0%
CCCATATCCACGGTACCCGT+GGG - chr1_3:64736032-64736051 Msa0133460:intron 60.0%
! ACCCACGGGTACCGTGGATA+TGG + chr1_3:64736036-64736055 None:intergenic 60.0%
! ACGGGTACCCGTGGGTATTG+AGG + chr1_3:64736319-64736338 None:intergenic 60.0%
GCCCATTATACGGGTACCCG+TGG + chr1_3:64736328-64736347 None:intergenic 60.0%
CTCGCGGGTGCCCATTATAC+GGG + chr1_3:64736337-64736356 None:intergenic 60.0%
CCTCGCGGGTGCCCATTATA+CGG + chr1_3:64736338-64736357 None:intergenic 60.0%
AATGGGCACCCGCGAGGATA+CGG - chr1_3:64736341-64736360 Msa0133460:five_prime_UTR 60.0%
GGCCTCATTGACGTTGCCAC+TGG - chr1_3:64737391-64737410 Msa0133460:intron 60.0%
CCGAACCATGCCCACCCCTA+AGG - chr1_3:64725936-64725955 Msa0133460:intron 65.0%
AGTCTCAGCGCCAATGCCGC+TGG + chr1_3:64727024-64727043 None:intergenic 65.0%
GACACCGTATGCGTCGCACG+AGG - chr1_3:64732091-64732110 Msa0133460:intron 65.0%
GTCTGGAGGAGGGGGAACGT+AGG - chr1_3:64733710-64733729 Msa0133460:intron 65.0%
CTGGAGGAGGGGGAACGTAG+GGG - chr1_3:64733712-64733731 Msa0133460:intron 65.0%
!! CCGTATAATGGGCACCCGCG+AGG - chr1_3:64736335-64736354 Msa0133460:five_prime_UTR 65.0%
ATGGGCACCCGCGAGGATAC+GGG - chr1_3:64736342-64736361 Msa0133460:five_prime_UTR 65.0%
TCTATCCAACGGGGCGGGGA+CGG - chr1_3:64736383-64736402 Msa0133460:five_prime_UTR 65.0%
GAGCAGCGAGTGCACGCCGT+GGG - chr1_3:64733666-64733685 Msa0133460:intron 70.0%
TGGGCACCCGCGAGGATACG+GGG - chr1_3:64736343-64736362 Msa0133460:five_prime_UTR 70.0%
CTATCCAACGGGGCGGGGAC+GGG - chr1_3:64736384-64736403 Msa0133460:five_prime_UTR 70.0%
GGAGCAGCGAGTGCACGCCG+TGG - chr1_3:64733665-64733684 Msa0133460:intron 75.0%
CGAGTGCACGCCGTGGGACG+CGG - chr1_3:64733672-64733691 Msa0133460:intron 75.0%
GCACCCGCGAGGATACGGGG+CGG - chr1_3:64736346-64736365 Msa0133460:five_prime_UTR 75.0%
CACCCGCGAGGATACGGGGC+GGG - chr1_3:64736347-64736366 Msa0133460:five_prime_UTR 75.0%
TGCCCGCCCCGTATCCTCGC+GGG + chr1_3:64736352-64736371 None:intergenic 75.0%
GTGCCCGCCCCGTATCCTCG+CGG + chr1_3:64736353-64736372 None:intergenic 75.0%
GCGAGGATACGGGGCGGGCA+CGG - chr1_3:64736352-64736371 Msa0133460:five_prime_UTR 75.0%
CGAGGATACGGGGCGGGCAC+GGG - chr1_3:64736353-64736372 Msa0133460:five_prime_UTR 75.0%
GATACCCGTCCCCGCCCCGT+TGG + chr1_3:64736391-64736410 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 64716560 64737997 64716560 ID=Msa0133460;Name=Msa0133460
chr1_3 mRNA 64716560 64737997 64716560 ID=Msa0133460-mRNA-1;Parent=Msa0133460;Name=Msa0133460-mRNA-1;_AED=0.33;_eAED=0.34;_QI=2000|0.6|0.43|1|0.73|0.62|16|0|255
chr1_3 exon 64716560 64716583 64716560 ID=Msa0133460-mRNA-1:exon:21870;Parent=Msa0133460-mRNA-1
chr1_3 exon 64724492 64724538 64724492 ID=Msa0133460-mRNA-1:exon:21869;Parent=Msa0133460-mRNA-1
chr1_3 exon 64724826 64724910 64724826 ID=Msa0133460-mRNA-1:exon:21868;Parent=Msa0133460-mRNA-1
chr1_3 exon 64724997 64725075 64724997 ID=Msa0133460-mRNA-1:exon:21867;Parent=Msa0133460-mRNA-1
chr1_3 exon 64725210 64725363 64725210 ID=Msa0133460-mRNA-1:exon:21866;Parent=Msa0133460-mRNA-1
chr1_3 exon 64725529 64725597 64725529 ID=Msa0133460-mRNA-1:exon:21865;Parent=Msa0133460-mRNA-1
chr1_3 exon 64726360 64726569 64726360 ID=Msa0133460-mRNA-1:exon:21864;Parent=Msa0133460-mRNA-1
chr1_3 exon 64726904 64726995 64726904 ID=Msa0133460-mRNA-1:exon:21863;Parent=Msa0133460-mRNA-1
chr1_3 exon 64733000 64733213 64733000 ID=Msa0133460-mRNA-1:exon:21862;Parent=Msa0133460-mRNA-1
chr1_3 exon 64733394 64733440 64733394 ID=Msa0133460-mRNA-1:exon:21861;Parent=Msa0133460-mRNA-1
chr1_3 exon 64734203 64734287 64734203 ID=Msa0133460-mRNA-1:exon:21860;Parent=Msa0133460-mRNA-1
chr1_3 exon 64734374 64734452 64734374 ID=Msa0133460-mRNA-1:exon:21859;Parent=Msa0133460-mRNA-1
chr1_3 exon 64734932 64735158 64734932 ID=Msa0133460-mRNA-1:exon:21858;Parent=Msa0133460-mRNA-1
chr1_3 exon 64736284 64736515 64736284 ID=Msa0133460-mRNA-1:exon:21857;Parent=Msa0133460-mRNA-1
chr1_3 exon 64736848 64737369 64736848 ID=Msa0133460-mRNA-1:exon:21856;Parent=Msa0133460-mRNA-1
chr1_3 exon 64737396 64737997 64737396 ID=Msa0133460-mRNA-1:exon:21855;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64737396 64737997 64737396 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64736848 64737369 64736848 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64736284 64736515 64736284 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64734932 64735158 64734932 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64734374 64734452 64734374 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64734203 64734287 64734203 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64733394 64733440 64733394 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 five_prime_UTR 64733008 64733213 64733008 ID=Msa0133460-mRNA-1:five_prime_utr;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64733000 64733007 64733000 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64726904 64726995 64726904 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64726360 64726569 64726360 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64725529 64725597 64725529 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64725210 64725363 64725210 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64724997 64725075 64724997 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64724826 64724910 64724826 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64724492 64724538 64724492 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
chr1_3 CDS 64716560 64716583 64716560 ID=Msa0133460-mRNA-1:cds;Parent=Msa0133460-mRNA-1
Gene Sequence

>Msa0133460

ATGTGCAACAAGAAAGGGGTTTCTGGATTCTCAGGGAGTTCAACTGCTGAAGAAGTTACTCATGGAATTGATGCAACTGGCCTCACTGCTATTGTCACTGGAGCATCCAGTGGTATTGGAGTTGAGACTATGCGTGTTCTTGCTTTGCGTGGTGTCCATGTGATTATGGCTGTTAGAAATAAGGTTGCTGCTAATGATATCAAAGAAGCAATACTGAAGGAGATTCCCTCAGCTAAAATAGATGTCATGGAGTTAGATCTCAGTTCATTGGAATCTGTCAAGAAATTTGCATCAGAATTTAATTCCTCTGGAATCATGTTATGCCCTTTCATGCTGTCCAAAGACAACATTGAACTGCATTTTGCTACAAACCACCTAGGTCATTTTCTCTTGACAAATCTTTTGTTGGACACAATGAAGAAAACAGCACATGAAAGTAAGAAAGAAGGAAGAATTGTTAATGTCTCCGCAAAAGCTTACATATTTGCATATCCTGAAGGAATCCGTTTTGACAAAATTAATGACCAATCAAGTTACAGCAAATGGGGTGCATATGGACAGTCAAAGCTTGCTAACATTTTACATGCCAATGAGCTTGCAAGACGCCTCAAGGCTGATGGGGTGGATATCATTGTGAATTCTCTTCATCCAGGAATCATTCTCACCAATCTTTCCCGCCATATGGGTGTACTCGACGGTATAATAAAGGTGATTGGGAAACTTGTGATGAAAAATGTTCAGCAGTTATCAAATCAAATCACAGCATAA
Protein sequence

>Msa0133460

MCNKKGVSGFSGSSTAEEVTHGIDATGLTAIVTGASSGIGVETMRVLALRGVHVIMAVRNKVAANDIKEAILKEIPSAKIDVMELDLSSLESVKKFASEFNSSGIMLCPFMLSKDNIELHFATNHLGHFLLTNLLLDTMKKTAHESKKEGRIVNVSAKAYIFAYPEGIRFDKINDQSSYSKWGAYGQSKLANILHANELARRLKADGVDIIVNSLHPGIILTNLSRHMGVLDGIIKVIGKLVMKNVQQLSNQITA*