AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181420 MtrunA17_Chr1g0202931 95.122 246 12 0 1 246 1 246 2.93e-172 482
Msa0181420 MtrunA17_Chr1g0202931 88.525 122 14 0 258 379 140 261 7.72e-70 221
Msa0181420 MtrunA17_Chr1g0202891 91.463 246 21 0 1 246 1 246 1.32e-161 455
Msa0181420 MtrunA17_Chr1g0202891 95.082 122 6 0 258 379 140 261 3.55e-77 240
Msa0181420 MtrunA17_Chr1g0202871 82.520 246 43 0 1 246 1 246 7.05e-146 416
Msa0181420 MtrunA17_Chr1g0202871 76.230 122 29 0 258 379 140 261 3.47e-59 194
Msa0181420 MtrunA17_Chr1g0202861 78.862 246 52 0 1 246 42 287 1.72e-141 406
Msa0181420 MtrunA17_Chr1g0202861 74.590 122 31 0 258 379 181 302 1.21e-58 194
Msa0181420 MtrunA17_Chr8g0386971 74.380 242 62 0 1 242 1 242 1.35e-128 372
Msa0181420 MtrunA17_Chr8g0386971 66.393 122 41 0 258 379 140 261 8.06e-51 172
Msa0181420 MtrunA17_Chr6g0470321 74.359 234 59 1 10 242 18 251 1.26e-118 347
Msa0181420 MtrunA17_Chr6g0470321 67.460 126 36 3 258 379 148 272 3.34e-47 163
Msa0181420 MtrunA17_Chr6g0470501 74.561 228 58 0 10 237 37 264 1.41e-117 345
Msa0181420 MtrunA17_Chr6g0470501 67.200 125 38 2 258 379 167 291 1.94e-50 172
Msa0181420 MtrunA17_Chr1g0182541 63.519 233 85 0 8 240 13 245 1.23e-103 308
Msa0181420 MtrunA17_Chr1g0182541 58.197 122 51 0 258 379 145 266 9.72e-41 146
Msa0181420 MtrunA17_Chr7g0262941 61.966 234 88 1 8 240 13 246 1.15e-99 298
Msa0181420 MtrunA17_Chr7g0262941 55.285 123 54 1 258 379 145 267 1.78e-37 137
Msa0181420 MtrunA17_Chr8g0388831 44.138 290 146 4 8 291 13 292 1.81e-69 221
Msa0181420 MtrunA17_Chr8g0388831 38.400 125 74 2 258 379 146 270 1.06e-18 86.3
Msa0181420 MtrunA17_Chr4g0058731 48.133 241 121 2 8 244 24 264 5.23e-67 215
Msa0181420 MtrunA17_Chr4g0058731 37.398 123 76 1 258 379 159 281 2.83e-17 82.4
Msa0181420 MtrunA17_Chr3g0117241 50.704 142 67 1 8 146 13 154 4.82e-40 139
Msa0181420 MtrunA17_Chr6g0481311 37.557 221 122 5 30 241 62 275 5.11e-27 110
Msa0181420 MtrunA17_Chr1g0202911 63.514 74 27 0 33 106 4 77 5.27e-26 100
Msa0181420 MtrunA17_Chr2g0317921 33.186 226 127 5 31 235 88 310 8.77e-24 101
Msa0181420 MtrunA17_Chr6g0466681 28.986 207 138 3 25 231 62 259 4.15e-20 90.5
Msa0181420 MtrunA17_Chr3g0117251 42.424 99 56 1 147 244 1 99 1.48e-18 82.4
Msa0181420 MtrunA17_Chr3g0117251 37.931 116 71 1 265 379 1 116 2.47e-17 79.3
Msa0181420 MtrunA17_Chr6g0469251 28.054 221 136 5 37 241 14 227 5.71e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181420 AT4G23420.5 74.684 237 60 0 1 237 1 237 7.37e-131 376
Msa0181420 AT4G23420.5 63.415 123 44 1 258 379 140 262 1.15e-47 163
Msa0181420 AT4G23420.4 74.684 237 60 0 1 237 1 237 8.98e-131 375
Msa0181420 AT4G23420.4 73.469 98 26 0 258 355 140 237 5.92e-45 155
Msa0181420 AT4G23420.1 74.684 237 60 0 1 237 1 237 2.73e-130 376
Msa0181420 AT4G23420.1 63.415 123 44 1 258 379 140 262 2.86e-47 163
Msa0181420 AT4G23420.2 74.684 237 60 0 1 237 1 237 2.73e-130 376
Msa0181420 AT4G23420.2 63.415 123 44 1 258 379 140 262 2.86e-47 163
Msa0181420 AT4G23430.2 72.614 241 66 0 1 241 1 241 3.67e-130 376
Msa0181420 AT4G23430.2 61.789 123 46 1 258 379 140 262 2.03e-47 164
Msa0181420 AT4G23430.1 72.199 241 65 1 1 241 1 239 3.73e-127 369
Msa0181420 AT4G23430.1 60.163 123 46 2 258 379 140 260 2.75e-44 155
Msa0181420 AT4G23420.3 73.617 235 62 0 3 237 20 254 3.98e-127 369
Msa0181420 AT4G23420.3 63.415 123 44 1 258 379 157 279 2.37e-47 164
Msa0181420 AT4G11410.2 71.837 245 69 0 1 245 1 245 1.93e-125 362
Msa0181420 AT4G11410.2 66.337 101 34 0 258 358 140 240 7.17e-39 140
Msa0181420 AT4G11410.1 71.837 245 69 0 1 245 1 245 1.40e-124 362
Msa0181420 AT4G11410.1 59.836 122 49 0 258 379 140 261 3.50e-43 153
Msa0181420 AT4G23430.4 68.880 241 65 1 1 241 1 231 3.20e-120 350
Msa0181420 AT4G23430.4 59.649 114 45 1 267 379 139 252 2.20e-41 148
Msa0181420 AT4G23430.3 68.465 241 64 2 1 241 1 229 3.78e-117 343
Msa0181420 AT4G23430.3 57.895 114 45 2 267 379 139 250 3.09e-38 139
Msa0181420 AT2G37540.2 59.494 237 96 0 6 242 10 246 7.30e-101 300
Msa0181420 AT2G37540.2 59.223 103 42 0 258 360 144 246 2.49e-36 133
Msa0181420 AT2G37540.1 59.494 237 96 0 6 242 10 246 1.44e-99 298
Msa0181420 AT2G37540.1 52.459 122 58 0 258 379 144 265 9.82e-37 135
Msa0181420 AT5G02540.1 60.669 239 94 0 6 244 10 248 4.56e-94 285
Msa0181420 AT5G02540.1 61.475 122 47 0 258 379 144 265 7.69e-43 152
Msa0181420 AT5G50130.9 49.587 242 119 2 8 246 13 254 2.97e-71 224
Msa0181420 AT5G50130.9 38.060 134 75 2 242 367 124 257 6.50e-20 88.6
Msa0181420 AT5G50130.3 49.794 243 118 3 8 246 13 255 9.94e-71 222
Msa0181420 AT5G50130.3 38.519 135 74 3 242 367 124 258 1.93e-19 87.4
Msa0181420 AT4G24050.1 43.599 289 148 3 8 291 13 291 1.33e-70 224
Msa0181420 AT4G24050.1 38.400 125 74 2 258 379 145 269 1.87e-18 85.9
Msa0181420 AT4G24050.2 48.718 234 118 1 8 239 13 246 3.64e-70 221
Msa0181420 AT4G24050.2 38.400 125 74 2 258 379 145 269 1.19e-18 85.5
Msa0181420 AT5G50130.2 49.583 240 118 2 8 244 13 252 1.01e-69 222
Msa0181420 AT5G50130.2 34.932 146 87 2 242 379 124 269 1.86e-19 88.6
Msa0181420 AT5G50130.4 49.793 241 117 3 8 244 13 253 3.65e-69 221
Msa0181420 AT5G50130.4 35.374 147 86 3 242 379 124 270 5.29e-19 87.4
Msa0181420 AT5G50130.1 49.793 241 117 3 8 244 13 253 4.33e-69 221
Msa0181420 AT5G50130.1 35.374 147 86 3 242 379 124 270 9.74e-19 86.7
Msa0181420 AT5G50130.6 49.296 213 107 1 33 244 7 219 2.22e-62 202
Msa0181420 AT5G50130.6 34.932 146 87 2 242 379 91 236 1.46e-19 88.2
Msa0181420 AT5G50130.8 49.296 213 107 1 33 244 7 219 2.25e-62 202
Msa0181420 AT5G50130.8 34.932 146 87 2 242 379 91 236 2.68e-19 87.8
Msa0181420 AT5G50130.5 49.533 214 106 2 33 244 7 220 6.70e-62 201
Msa0181420 AT5G50130.5 35.374 147 86 3 242 379 91 237 3.67e-19 87.4
Msa0181420 AT5G50130.7 49.533 214 106 2 33 244 7 220 7.14e-62 201
Msa0181420 AT5G50130.7 35.374 147 86 3 242 379 91 237 7.44e-19 86.7
Msa0181420 AT1G64590.1 42.500 280 146 3 17 291 22 291 8.48e-58 191
Msa0181420 AT1G64590.1 36.800 125 76 2 258 379 145 269 4.20e-12 67.0
Msa0181420 AT4G27760.1 36.323 223 126 6 30 244 58 272 1.40e-26 109
Msa0181420 AT5G54190.1 32.589 224 127 5 33 235 96 316 1.53e-26 110
Msa0181420 AT5G53090.1 38.356 219 121 5 30 241 57 268 3.07e-26 108
Msa0181420 AT5G53100.1 35.683 227 130 5 30 247 45 264 1.33e-23 100
Msa0181420 AT1G03630.1 35.111 225 123 6 31 235 91 312 6.60e-23 99.8
Msa0181420 AT1G03630.2 35.111 225 123 6 31 235 89 310 6.92e-23 99.4
Msa0181420 AT4G27440.2 30.980 255 148 6 4 233 59 310 8.38e-22 96.3
Msa0181420 AT4G27440.1 30.980 255 148 6 4 233 59 310 8.38e-22 96.3
Msa0181420 AT4G09750.1 30.049 203 133 3 29 231 43 236 3.62e-21 93.6
Msa0181420 AT5G54190.2 30.151 199 114 5 58 235 1 195 4.68e-19 86.7
Msa0181420 AT5G15940.4 29.075 227 136 7 32 241 63 281 8.51e-16 77.8
Msa0181420 AT5G15940.1 29.075 227 136 7 32 241 62 280 9.21e-16 78.2
Msa0181420 AT5G15940.3 29.075 227 136 7 32 241 63 281 9.36e-16 78.2
Msa0181420 AT5G15940.2 29.075 227 136 7 32 241 63 281 9.36e-16 78.2
Msa0181420 AT5G04070.1 28.767 219 139 5 32 237 61 275 3.20e-14 73.6
Msa0181420 AT3G59710.3 31.325 249 128 10 31 247 20 257 1.86e-11 64.7
Msa0181420 AT3G59710.2 31.325 249 128 10 31 247 49 286 2.25e-11 64.7
Msa0181420 AT3G59710.1 31.325 249 128 10 31 247 30 267 2.25e-11 64.7
Msa0181420 AT5G61830.1 26.693 251 135 8 32 242 39 280 2.61e-11 64.7
Msa0181420 AT5G61830.2 26.693 251 135 8 32 242 39 280 2.61e-11 64.7

Find 146 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCCTTAATTTACTTTC+TGG 0.188746 1_4:+69642634 None:intergenic
CAATGAAAACATAAAGTTTA+AGG 0.192623 1_4:+69643042 None:intergenic
TTCAGGAAGAAAGGGATTTC+TGG 0.209019 1_4:-69642129 Msa0181420:CDS
CATTGGAATGCGTTCTTATC+AGG 0.221106 1_4:-69642426 Msa0181420:five_prime_UTR
AGCATAGTGGTTCTTATAAA+AGG 0.221115 1_4:-69642770 Msa0181420:five_prime_UTR
TCAATTTCTTGTTCTTCTTT+TGG 0.274467 1_4:+69643326 None:intergenic
GGCTTACACATTTGCATATT+CGG 0.280798 1_4:-69640178 Msa0181420:CDS
ACAGGAACAAAAGCTCTTAT+TGG 0.282027 1_4:+69642864 None:intergenic
TCAAGCCAGAAAGTAAATTA+AGG 0.283081 1_4:-69642639 Msa0181420:five_prime_UTR
CTGTAGTTCAATGTTGTCTT+TGG 0.287889 1_4:+69640833 None:intergenic
TTACCATCATGTGGCCATTC+AGG 0.289613 1_4:-69642146 Msa0181420:exon
ATTACAAATCCAAAATCTTC+AGG 0.292734 1_4:+69643158 None:intergenic
CACCAATCTTTCCCGACATA+TGG 0.300550 1_4:-69637710 Msa0181420:CDS
GCGTGGTGTCCATGTGATTA+TGG 0.305515 1_4:-69641654 Msa0181420:CDS
AGCACTTGCTGTGGCTAATA+TGG 0.317291 1_4:-69642733 Msa0181420:five_prime_UTR
CTATTGGTTATTACCTTGAT+TGG 0.330943 1_4:+69640127 None:intergenic
CACCAATCTTTCCCGCCATA+TGG 0.337645 1_4:-69639424 Msa0181420:CDS
GATTTGGTTATTACCTTGAT+TGG 0.339925 1_4:+69638068 None:intergenic
TTGTCAAAACGGATTCCTTC+AGG 0.344301 1_4:+69638100 None:intergenic
TTGTATACAGTTACAGCAAA+TGG 0.345777 1_4:-69637935 Msa0181420:intron
GATTATGGCTGTTAGAAATA+TGG 0.346372 1_4:-69641639 Msa0181420:CDS
AAAGGGATTTCTGGATTCTC+AGG 0.351168 1_4:-69642120 Msa0181420:CDS
TTCCTGTTCTTTATAATTCA+AGG 0.354426 1_4:-69642848 Msa0181420:five_prime_UTR
GAAATACACAAATTTGTATA+TGG 0.359155 1_4:-69642473 Msa0181420:five_prime_UTR
GGAAGAATTGTTAATGTCTC+TGG 0.379542 1_4:-69640204 Msa0181420:CDS
ATGGTTAGCCCTGAAGATTT+TGG 0.385009 1_4:-69643167 Msa0181420:five_prime_UTR
GATCAGGATATTTATGAGAT+TGG 0.390575 1_4:+69643422 None:intergenic
ACAGGTATAATAAAGGTGAT+TGG 0.391873 1_4:-69637376 Msa0181420:intron
ACCCATATGGCGGGAAAGAT+TGG 0.391956 1_4:+69639422 None:intergenic
CAGCTAAACAATTGAGTTGT+CGG 0.396906 1_4:+69643216 None:intergenic
GAGGCATCTTGCAAGTTCAT+TGG 0.404865 1_4:+69637872 None:intergenic
CTCCTTGAATTATAAAGAAC+AGG 0.405168 1_4:+69642846 None:intergenic
ACAGGAGCAACCAGTGGTAT+TGG 0.407904 1_4:-69641704 Msa0181420:intron
TACAACAAACAGAGTGCATA+TGG 0.418172 1_4:-69639638 Msa0181420:CDS
TATTTGAATGATGACATCAT+TGG 0.424697 1_4:-69642344 Msa0181420:five_prime_UTR
AGTAATTAAATAAATTTGAC+AGG 0.425043 1_4:-69642497 Msa0181420:five_prime_UTR
AAGGACAAATGGTTGGTAAA+GGG 0.425534 1_4:+69643500 None:intergenic
TGGAATATTTGAAGGTGATA+AGG 0.427078 1_4:-69642976 Msa0181420:five_prime_UTR
CAGGTATAATAAAGGTGATT+GGG 0.427139 1_4:-69637375 Msa0181420:CDS
ACAGGTATAATACAGGTGAT+TGG 0.428022 1_4:-69638731 Msa0181420:intron
TACAGCAAATGGGGTGCATA+TGG 0.428773 1_4:-69637924 Msa0181420:CDS
CAGGTATAATACAGGTGATT+GGG 0.437343 1_4:-69638730 Msa0181420:intron
AAGTAAATTAAGGAATGATT+AGG 0.437346 1_4:-69642629 Msa0181420:five_prime_UTR
TTACGCAACAGGTATAATAA+AGG 0.438898 1_4:-69637383 Msa0181420:intron
TGTATACAGTTACAGCAAAT+GGG 0.440853 1_4:-69637934 Msa0181420:intron
ACCCATATGTCGGGAAAGAT+TGG 0.441432 1_4:+69637708 None:intergenic
TCTGGTGGAGTTGGACCAAC+TGG 0.442420 1_4:-69643365 Msa0181420:five_prime_UTR
ACAAAATTAATGACCAATCA+AGG 0.448930 1_4:-69638081 Msa0181420:intron
ACAAAATTAATGACCAATCA+AGG 0.448930 1_4:-69640140 Msa0181420:intron
TTACATCTTGATCAGGATGA+TGG 0.449048 1_4:-69639489 Msa0181420:intron
TGAGAGGGAGTAGAAAGATA+AGG 0.451151 1_4:+69643451 None:intergenic
AGGAATGATTAGGTAGCTAT+AGG 0.452350 1_4:-69642619 Msa0181420:five_prime_UTR
AAAACTCTAGGAAGATAAAC+AGG 0.453140 1_4:+69642675 None:intergenic
GAAATCCCTTTCTTCCTGAA+TGG 0.455018 1_4:+69642132 None:intergenic
TTGAACCATGACTTCTCTGC+TGG 0.457636 1_4:-69642540 Msa0181420:five_prime_UTR
TATCAAAGCAGCAATACTTA+AGG 0.461173 1_4:-69641603 Msa0181420:CDS
CCACATACCTAAGTGGTTTG+TGG 0.461540 1_4:+69640806 None:intergenic
GAGGCGTCTTGCAAGCTCAT+TGG 0.461840 1_4:+69639586 None:intergenic
AGATGATGGGGTTGAAATGA+AGG 0.462247 1_4:+69643481 None:intergenic
AAGACCAGAGGAGTTGAATT+CGG 0.463073 1_4:+69641508 None:intergenic
TTACATCTTGATCAGGCTGA+TGG 0.465863 1_4:-69637775 Msa0181420:intron
CCATGTAAAATATATGCTAT+AGG 0.465903 1_4:+69642996 None:intergenic
TGGTAAAGGGGTAAGGTTCG+TGG 0.466371 1_4:+69643513 None:intergenic
ACCAATCTTTCCCGACATAT+GGG 0.476686 1_4:-69637709 Msa0181420:CDS
AGATTGGTGAGAATGATTCC+TGG 0.477751 1_4:+69637724 None:intergenic
AGATTGGTGAGAATGATTCC+TGG 0.477751 1_4:+69639438 None:intergenic
TTCATTGGCATGTAAAATGT+TGG 0.478897 1_4:+69637887 None:intergenic
TAACAAGAGAATTTGTGATC+AGG 0.480171 1_4:+69643406 None:intergenic
ACTCATGGAATTGATGCAAC+TGG 0.480827 1_4:-69642075 Msa0181420:CDS
GCATCCGAATTCAACTCCTC+TGG 0.483856 1_4:-69641512 Msa0181420:CDS
GGAGTTAGATCTCAGTTCAA+TGG 0.492329 1_4:-69641552 Msa0181420:CDS
ATGTGGCCATTCAGGAAGAA+AGG 0.492857 1_4:-69642138 Msa0181420:CDS
TTGTCTTTGGACAGCATGAA+AGG 0.496194 1_4:+69640846 None:intergenic
ACTATGCTCTTCACCAACCT+TGG 0.496587 1_4:+69642785 None:intergenic
TTACAAATCCAAAATCTTCA+GGG 0.499930 1_4:+69643159 None:intergenic
GAAGGACAAATGGTTGGTAA+AGG 0.500940 1_4:+69643499 None:intergenic
CAGTTTGCCACAAACCACTT+AGG 0.502711 1_4:-69640813 Msa0181420:intron
TCTTATAAAAGGATTTATGC+TGG 0.505951 1_4:-69642759 Msa0181420:five_prime_UTR
GAGTTCCAAGCCTAGAGATT+CGG 0.506605 1_4:+69643597 None:intergenic
ACCAATCTTTCCCGCCATAT+GGG 0.511754 1_4:-69639423 Msa0181420:CDS
TACATCTTGATCAGGCTGAT+GGG 0.514593 1_4:-69637774 Msa0181420:intron
GATAAGGTTAGATCAGATGA+TGG 0.519617 1_4:+69643467 None:intergenic
CTTCCTGAATGGCCACATGA+TGG 0.519739 1_4:+69642143 None:intergenic
GGTCTCACTGCTATTGTCAC+TGG 0.523841 1_4:-69642054 Msa0181420:intron
AGGACAAATGGTTGGTAAAG+GGG 0.524435 1_4:+69643501 None:intergenic
GCACATGAAAGTAAGAAAGA+AGG 0.529008 1_4:-69638166 Msa0181420:CDS
TACCGTGGATTACACCCATA+TGG 0.529890 1_4:+69639409 None:intergenic
AATTGAGTTGTCGGAATGAG+AGG 0.532641 1_4:+69643225 None:intergenic
GTCGAGTACACCCATATGTC+GGG 0.534278 1_4:+69637699 None:intergenic
TACACATTTGCATATTCGGA+AGG 0.534970 1_4:-69640174 Msa0181420:CDS
TGACACCGAATCTCTAGGCT+TGG 0.535666 1_4:-69643602 None:intergenic
AAATGGTTGGTAAAGGGGTA+AGG 0.536543 1_4:+69643506 None:intergenic
CTCAGCTAAAATTGACGTCA+TGG 0.538413 1_4:-69641573 Msa0181420:CDS
ATTGTGAATTCTCTTCATCC+AGG 0.539076 1_4:-69637742 Msa0181420:CDS
ATTGTGAATTCTCTTCATCC+AGG 0.539076 1_4:-69639456 Msa0181420:CDS
TGTGGCCATTCAGGAAGAAA+GGG 0.539455 1_4:-69642137 Msa0181420:CDS
TTCAGGGCTAACCATGCCAC+TGG 0.540431 1_4:+69643175 None:intergenic
ATAAGGTTAGATCAGATGAT+GGG 0.543984 1_4:+69643468 None:intergenic
CGCCATATGGGTGTAATCCA+CGG 0.545789 1_4:-69639411 Msa0181420:intron
AGAGATGAGATTTCCAAGGT+TGG 0.547974 1_4:-69642798 Msa0181420:five_prime_UTR
AAAGTCAATAGTGCAGATCA+TGG 0.548372 1_4:+69642201 None:intergenic
AATAACCAGCAGAGAAGTCA+TGG 0.550286 1_4:+69642535 None:intergenic
ACTGCTGAACAAGTTACTCA+TGG 0.551436 1_4:-69642090 Msa0181420:CDS
GGGTTGAAATGAAGGACAAA+TGG 0.551751 1_4:+69643489 None:intergenic
TGTCTTTGGACAGCATGAAA+GGG 0.554321 1_4:+69640847 None:intergenic
GCACACGAAAGTAAGAAAGA+AGG 0.557161 1_4:-69640225 Msa0181420:CDS
GTAATTGCAAGAAACAATGC+AGG 0.558972 1_4:-69640882 Msa0181420:intron
TAGTGTGACACCGAATCTCT+AGG 0.559804 1_4:-69643607 None:intergenic
TACATATTTGCATATCCTGA+AGG 0.560462 1_4:-69638115 Msa0181420:CDS
TACATCTTGATCAGGATGAT+GGG 0.560641 1_4:-69639488 Msa0181420:intron
TGAGCTTGCAAGACGCCTCA+AGG 0.563477 1_4:-69639582 Msa0181420:intron
TGTCTTATCAGCCAGTGGCA+TGG 0.570622 1_4:-69643186 Msa0181420:five_prime_UTR
ATATTGCCCACATACCTAAG+TGG 0.571755 1_4:+69640799 None:intergenic
TCTTGATCAGGCTGATGGGG+TGG 0.576337 1_4:-69637770 Msa0181420:intron
GTGGATTACACCCATATGGC+GGG 0.577534 1_4:+69639413 None:intergenic
AAGGGATTTCTGGATTCTCA+GGG 0.585889 1_4:-69642119 Msa0181420:CDS
AATATGCATACGTTGTACAT+TGG 0.586433 1_4:-69642443 Msa0181420:five_prime_UTR
CGACATATGGGTGTACTCGA+CGG 0.590202 1_4:-69637697 Msa0181420:intron
GTTTAGAGATGAGATTTCCA+AGG 0.593748 1_4:-69642802 Msa0181420:five_prime_UTR
TGAAATGAAGGACAAATGGT+TGG 0.594185 1_4:+69643493 None:intergenic
GTTGTTGTCTTATCAGCCAG+TGG 0.595119 1_4:-69643191 Msa0181420:five_prime_UTR
TCTTACATCAAGATGTTCAA+CGG 0.596176 1_4:+69641485 None:intergenic
AGTCTCAACTCCAATACCAC+TGG 0.604354 1_4:+69641694 None:intergenic
AATTGTTAATGTCTCTGGAG+AGG 0.607553 1_4:-69640199 Msa0181420:CDS
AGGCTAATGTCACAGCCAGT+TGG 0.608232 1_4:+69643350 None:intergenic
ACATCTTGATCAGGCTGATG+GGG 0.610650 1_4:-69637773 Msa0181420:intron
ATTGACTTTGTGAATTGTGA+CGG 0.611694 1_4:-69642187 Msa0181420:five_prime_UTR
TGCTGGAAGAGCACTTGCTG+TGG 0.614632 1_4:-69642742 Msa0181420:five_prime_UTR
TGAACTTGCAAGATGCCTCA+AGG 0.616025 1_4:-69637868 Msa0181420:intron
ATATTTGAAGGTGATAAGGA+AGG 0.616957 1_4:-69642972 Msa0181420:five_prime_UTR
CGTCGAGTACACCCATATGT+CGG 0.621129 1_4:+69637698 None:intergenic
ACGCGTGTTCTTGCTTTGCG+TGG 0.623338 1_4:-69641671 Msa0181420:CDS
TCTTGATCAGGATGATGGGG+TGG 0.624894 1_4:-69639484 Msa0181420:intron
CGTGGATTACACCCATATGG+CGG 0.632054 1_4:+69639412 None:intergenic
GTAATTAAATAAATTTGACA+GGG 0.633762 1_4:-69642496 Msa0181420:five_prime_UTR
TAAGGTTAGATCAGATGATG+GGG 0.648906 1_4:+69643469 None:intergenic
TTCTAACAGCCATAATCACA+TGG 0.652025 1_4:+69641645 None:intergenic
TAATTAAATAAATTTGACAG+GGG 0.658021 1_4:-69642495 Msa0181420:five_prime_UTR
GTATACAGTTACAGCAAATG+GGG 0.659776 1_4:-69637933 Msa0181420:intron
GATGTTCAACGGAAGACCAG+AGG 0.668187 1_4:+69641496 None:intergenic
AAGGTTGGTGAAGAGCATAG+TGG 0.672560 1_4:-69642783 Msa0181420:five_prime_UTR
CTGTTCTTTATAATTCAAGG+AGG 0.674362 1_4:-69642845 Msa0181420:five_prime_UTR
ACATCTTGATCAGGATGATG+GGG 0.677424 1_4:-69639487 Msa0181420:intron
AACATAGTGACATAATAACA+TGG 0.690821 1_4:-69642377 Msa0181420:five_prime_UTR
ATGGTAACAGGAGCAACCAG+TGG 0.692173 1_4:-69641710 Msa0181420:intron
TATGTTGAAGATGAGATGTG+TGG 0.706621 1_4:+69642394 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAATTTTATATATGATTT+AGG + chr1_4:69638667-69638686 None:intergenic 10.0%
!! AGATATTATAACAATTATTA+TGG + chr1_4:69639626-69639645 None:intergenic 10.0%
!! TCAAATAAATAGTAAATAAA+AGG + chr1_4:69639910-69639929 None:intergenic 10.0%
!! TAAAAATAATTGTAAAATGA+TGG + chr1_4:69640331-69640350 None:intergenic 10.0%
!!! TTTTGTATTTTGTTTTTAAA+TGG - chr1_4:69640877-69640896 Msa0181420:intron 10.0%
!! AACATATAACTTAATTATAT+AGG + chr1_4:69642607-69642626 None:intergenic 10.0%
!!! TTATTTTGATGATTTGTATA+AGG - chr1_4:69638379-69638398 Msa0181420:intron 15.0%
!! AGTAATTAAATAAATTTGAC+AGG - chr1_4:69638447-69638466 Msa0181420:intron 15.0%
!! GTAATTAAATAAATTTGACA+GGG - chr1_4:69638448-69638467 Msa0181420:intron 15.0%
!! TAATTAAATAAATTTGACAG+GGG - chr1_4:69638449-69638468 Msa0181420:intron 15.0%
!!! ATTTTATATATGATTTAGGT+GGG + chr1_4:69638663-69638682 None:intergenic 15.0%
!!! AATTTTATATATGATTTAGG+TGG + chr1_4:69638664-69638683 None:intergenic 15.0%
!! ATAATCTTGAAGTTAAATTA+TGG + chr1_4:69639108-69639127 None:intergenic 15.0%
!! AAATTATTATATGGATATGA+TGG - chr1_4:69639210-69639229 Msa0181420:intron 15.0%
!! AAAACTTTAAATTAAGTTAG+AGG + chr1_4:69639543-69639562 None:intergenic 15.0%
!!! AATGCAATTTACTTTTTAAA+TGG + chr1_4:69639572-69639591 None:intergenic 15.0%
!! GAAACTTTAAATTAAGTTAA+CGG - chr1_4:69639867-69639886 Msa0181420:intron 15.0%
!!! TTTTTAAATTACAGTTACAA+AGG - chr1_4:69640345-69640364 Msa0181420:intron 15.0%
!!! TTTTAAATTACAGTTACAAA+GGG - chr1_4:69640346-69640365 Msa0181420:intron 15.0%
!!! AAACTTCAATTTTATTTTCT+TGG - chr1_4:69640948-69640967 Msa0181420:intron 15.0%
!!! AACTTCAATTTTATTTTCTT+GGG - chr1_4:69640949-69640968 Msa0181420:intron 15.0%
!! TACGAGTAAATAAATAATTA+CGG + chr1_4:69641751-69641770 None:intergenic 15.0%
!!! TTTATCTGATTATTTTGAAT+TGG - chr1_4:69642046-69642065 Msa0181420:intron 15.0%
!!! TTATCTGATTATTTTGAATT+GGG - chr1_4:69642047-69642066 Msa0181420:intron 15.0%
!! TTGTTATAAACGTTTATTAA+GGG - chr1_4:69642327-69642346 Msa0181420:five_prime_UTR 15.0%
!! CAATGAAAACATAAAGTTTA+AGG + chr1_4:69637905-69637924 None:intergenic 20.0%
!!! CTTAAACTTTATGTTTTCAT+TGG - chr1_4:69637903-69637922 Msa0181420:CDS 20.0%
!!! ATTTTACATGGAATATTTGA+AGG - chr1_4:69637960-69637979 Msa0181420:intron 20.0%
!! AAGTAAATTAAGGAATGATT+AGG - chr1_4:69638315-69638334 Msa0181420:intron 20.0%
!! GAAATACACAAATTTGTATA+TGG - chr1_4:69638471-69638490 Msa0181420:intron 20.0%
!! TAAAACTACTATTCAACAAA+GGG + chr1_4:69638972-69638991 None:intergenic 20.0%
!! ATAAAACTACTATTCAACAA+AGG + chr1_4:69638973-69638992 None:intergenic 20.0%
!! CTACATATATTCATACATAA+AGG + chr1_4:69639022-69639041 None:intergenic 20.0%
!! GGCTATGAAAAATTATTATA+TGG - chr1_4:69639201-69639220 Msa0181420:intron 20.0%
!! TTGAACATTGTAAAGATAAA+GGG - chr1_4:69639807-69639826 Msa0181420:intron 20.0%
!! GAATCAAATGAATAAAAACT+CGG + chr1_4:69640194-69640213 None:intergenic 20.0%
!! TCTAATAAAATGAAGAGAAA+AGG - chr1_4:69640254-69640273 Msa0181420:CDS 20.0%
!!! ATTTTGTTTTTAAATGGAAG+AGG - chr1_4:69640883-69640902 Msa0181420:intron 20.0%
!!! ATTTTATTTTCTTGGGAAAT+CGG - chr1_4:69640956-69640975 Msa0181420:intron 20.0%
!! ATAGTACTCAATATGTATTT+CGG - chr1_4:69641009-69641028 Msa0181420:intron 20.0%
!! TAAATAATTACGGGTATAAT+AGG + chr1_4:69641741-69641760 None:intergenic 20.0%
!! ACGAGTAAATAAATAATTAC+GGG + chr1_4:69641750-69641769 None:intergenic 20.0%
!!! TAGAAAACAAACACATTTTA+TGG + chr1_4:69642131-69642150 None:intergenic 20.0%
!! GTTGTTATAAACGTTTATTA+AGG - chr1_4:69642326-69642345 Msa0181420:five_prime_UTR 20.0%
!! NNNNNNNNNNCTTCACTTGT+GGG + chr1_4:69642479-69642498 None:intergenic 20.0%
!!! ACTTAATTATATAGGTTGAT+TGG + chr1_4:69642599-69642618 None:intergenic 20.0%
!! TGTAAATTATGTAATTGTAC+AGG - chr1_4:69642709-69642728 Msa0181420:five_prime_UTR 20.0%
!!! TTTTTTTTCTGCATTATCTA+CGG - chr1_4:69643352-69643371 Msa0181420:five_prime_UTR 20.0%
!! TATCATTCATCTACATTTAT+AGG - chr1_4:69643416-69643435 Msa0181420:five_prime_UTR 20.0%
!!! TAGAAAACAAACACATTTTA+TGG + chr1_4:69642131-69642150 None:intergenic 20.0%
! GTCCTAACTAAAAATAACAT+AGG - chr1_4:69637395-69637414 Msa0181420:intron 25.0%
!!! CACCTATGTTATTTTTAGTT+AGG + chr1_4:69637400-69637419 None:intergenic 25.0%
!! TCAATTTCTTGTTCTTCTTT+TGG + chr1_4:69637621-69637640 None:intergenic 25.0%
! TTACAAATCCAAAATCTTCA+GGG + chr1_4:69637788-69637807 None:intergenic 25.0%
! ATTACAAATCCAAAATCTTC+AGG + chr1_4:69637789-69637808 None:intergenic 25.0%
!! AAATAGGTTGTTCTTTTGAA+GGG + chr1_4:69637863-69637882 None:intergenic 25.0%
!! AAAATAGGTTGTTCTTTTGA+AGG + chr1_4:69637864-69637883 None:intergenic 25.0%
!!! TTGTTTTGTTGAGTGAAAAT+AGG + chr1_4:69637879-69637898 None:intergenic 25.0%
! CCATGTAAAATATATGCTAT+AGG + chr1_4:69637951-69637970 None:intergenic 25.0%
!! CCTATAGCATATATTTTACA+TGG - chr1_4:69637948-69637967 Msa0181420:intron 25.0%
! TTCCTGTTCTTTATAATTCA+AGG - chr1_4:69638096-69638115 Msa0181420:CDS 25.0%
! TCTTATAAAAGGATTTATGC+TGG - chr1_4:69638185-69638204 Msa0181420:CDS 25.0%
!!! TTTTGGTGCTTTAATTTGTT+TGG - chr1_4:69638236-69638255 Msa0181420:intron 25.0%
!!! TAATACGCTTTAAAAACTCT+AGG + chr1_4:69638284-69638303 None:intergenic 25.0%
! TCATTCCTTAATTTACTTTC+TGG + chr1_4:69638313-69638332 None:intergenic 25.0%
! AACATAGTGACATAATAACA+TGG - chr1_4:69638567-69638586 Msa0181420:intron 25.0%
! TATTTGAATGATGACATCAT+TGG - chr1_4:69638600-69638619 Msa0181420:intron 25.0%
!! TTTTTAACGATCTTTGTAGT+TGG - chr1_4:69639080-69639099 Msa0181420:intron 25.0%
! GTTGAACATTGTAAAGATAA+AGG - chr1_4:69639806-69639825 Msa0181420:intron 25.0%
! GTAAAATGATGGTATTTCAT+TGG + chr1_4:69640320-69640339 None:intergenic 25.0%
!!! GAAACATTACGAGTTTTAAT+TGG - chr1_4:69640379-69640398 Msa0181420:intron 25.0%
!!! TACGAGTTTTAATTGGAATT+TGG - chr1_4:69640386-69640405 Msa0181420:intron 25.0%
! GAATTCATCTTAGAGTTTAA+TGG + chr1_4:69640450-69640469 None:intergenic 25.0%
!! GGTCATTAATTTTGTCAAAA+CGG + chr1_4:69640799-69640818 None:intergenic 25.0%
! ACAAAATTAATGACCAATCA+AGG - chr1_4:69640804-69640823 Msa0181420:intron 25.0%
!! TTGGTATCAAAACTTTTATC+TGG + chr1_4:69641060-69641079 None:intergenic 25.0%
!! ATATCATATTAGCAGGTTTT+TGG + chr1_4:69641079-69641098 None:intergenic 25.0%
!!! AATCGTTTTAACTGTAAACA+TGG + chr1_4:69641215-69641234 None:intergenic 25.0%
!! TTTGTTGTAACTGTATTACA+AGG + chr1_4:69641295-69641314 None:intergenic 25.0%
!!! TTTGTTTTTGTGTGTAAAAC+TGG - chr1_4:69641399-69641418 Msa0181420:intron 25.0%
! TCATTCATCTACATTACTAT+AGG - chr1_4:69641703-69641722 Msa0181420:CDS 25.0%
! ACTACAGCATAAAAAAACAT+AGG + chr1_4:69641880-69641899 None:intergenic 25.0%
! AGTAATAATGTATGAATGAG+TGG + chr1_4:69642017-69642036 None:intergenic 25.0%
!! TTATGTTTGATTTATGCAAC+AGG - chr1_4:69642195-69642214 Msa0181420:five_prime_UTR 25.0%
! ACCTATGATTTATAAATGTG+AGG - chr1_4:69642283-69642302 Msa0181420:five_prime_UTR 25.0%
! CCTATGATTTATAAATGTGA+GGG - chr1_4:69642284-69642303 Msa0181420:five_prime_UTR 25.0%
! TCTAATCTGTGTTTCTTTAT+TGG + chr1_4:69642354-69642373 None:intergenic 25.0%
! TTCTTTAAATGCTTAAACTG+TGG - chr1_4:69642659-69642678 Msa0181420:five_prime_UTR 25.0%
!! GGTCATTAATTTTGTCAAAA+CGG + chr1_4:69640799-69640818 None:intergenic 25.0%
! ACAAAATTAATGACCAATCA+AGG - chr1_4:69640804-69640823 Msa0181420:intron 25.0%
! TTTGAACTTATGTTACCTAT+TGG + chr1_4:69642901-69642920 None:intergenic 25.0%
!!! TTTGTTTTTGTGTGTAAAAC+TGG - chr1_4:69641399-69641418 Msa0181420:intron 25.0%
ATAAGGTTAGATCAGATGAT+GGG + chr1_4:69637479-69637498 None:intergenic 30.0%
!!! TGAGATTGGTTTTTTTGAGA+GGG + chr1_4:69637511-69637530 None:intergenic 30.0%
!!! ATGAGATTGGTTTTTTTGAG+AGG + chr1_4:69637512-69637531 None:intergenic 30.0%
GATCAGGATATTTATGAGAT+TGG + chr1_4:69637525-69637544 None:intergenic 30.0%
TAACAAGAGAATTTGTGATC+AGG + chr1_4:69637541-69637560 None:intergenic 30.0%
! TTTCTTGTTCTTCTTTTGGT+AGG + chr1_4:69637617-69637636 None:intergenic 30.0%
!!! AGGAAACTAGTTTTTCTTTG+TGG + chr1_4:69637702-69637721 None:intergenic 30.0%
TGGAATATTTGAAGGTGATA+AGG - chr1_4:69637968-69637987 Msa0181420:intron 30.0%
ATATTTGAAGGTGATAAGGA+AGG - chr1_4:69637972-69637991 Msa0181420:intron 30.0%
! TACACCACATGTTTTTCTTT+TGG - chr1_4:69638007-69638026 Msa0181420:intron 30.0%
!! TTTGGCTAGTCAAGTTTTTA+TGG - chr1_4:69638025-69638044 Msa0181420:intron 30.0%
CTCCTTGAATTATAAAGAAC+AGG + chr1_4:69638101-69638120 None:intergenic 30.0%
CTGTTCTTTATAATTCAAGG+AGG - chr1_4:69638099-69638118 Msa0181420:CDS 30.0%
AGCATAGTGGTTCTTATAAA+AGG - chr1_4:69638174-69638193 Msa0181420:CDS 30.0%
! AAAACTCTAGGAAGATAAAC+AGG + chr1_4:69638272-69638291 None:intergenic 30.0%
TCAAGCCAGAAAGTAAATTA+AGG - chr1_4:69638305-69638324 Msa0181420:intron 30.0%
AATATGCATACGTTGTACAT+TGG - chr1_4:69638501-69638520 Msa0181420:intron 30.0%
! ATTGACTTTGTGAATTGTGA+CGG - chr1_4:69638757-69638776 Msa0181420:intron 30.0%
! GATTTTTCATTACCATCATG+TGG - chr1_4:69638789-69638808 Msa0181420:intron 30.0%
!! AGTTTTATGTTGCAGAGTTA+TGG - chr1_4:69638985-69639004 Msa0181420:intron 30.0%
! GTTTTATGTTGCAGAGTTAT+GGG - chr1_4:69638986-69639005 Msa0181420:intron 30.0%
! TTTTATGTTGCAGAGTTATG+GGG - chr1_4:69638987-69639006 Msa0181420:intron 30.0%
! CTTTTCATCATTTAGACTTG+AGG - chr1_4:69639042-69639061 Msa0181420:intron 30.0%
TTACATCAAATTCTTGCAAC+TGG - chr1_4:69639180-69639199 Msa0181420:intron 30.0%
ATTATATGGATATGATGGCA+TGG - chr1_4:69639215-69639234 Msa0181420:intron 30.0%
GATTATGGCTGTTAGAAATA+TGG - chr1_4:69639305-69639324 Msa0181420:intron 30.0%
TATCAAAGCAGCAATACTTA+AGG - chr1_4:69639341-69639360 Msa0181420:intron 30.0%
TCTTACATCAAGATGTTCAA+CGG + chr1_4:69639462-69639481 None:intergenic 30.0%
GAACATCTTGATGTAAGAAA+AGG - chr1_4:69639464-69639483 Msa0181420:CDS 30.0%
! CAGTTTTGCCTAAATAAAGA+TGG + chr1_4:69639510-69639529 None:intergenic 30.0%
CATGATCAAGAAAGATAAAC+TGG + chr1_4:69639993-69640012 None:intergenic 30.0%
TTCTTGATCATGTTCATTCA+AGG - chr1_4:69640001-69640020 Msa0181420:intron 30.0%
!! GGGCAATATGTTTGATTTTA+CGG - chr1_4:69640159-69640178 Msa0181420:CDS 30.0%
! TGAATAAAAACTCGGTTTGT+TGG + chr1_4:69640186-69640205 None:intergenic 30.0%
TAAAACTCGTAATGTTTCCA+TGG + chr1_4:69640377-69640396 None:intergenic 30.0%
! TCTAAGATGAATTCCTATGT+GGG - chr1_4:69640456-69640475 Msa0181420:intron 30.0%
CTTGATCATTTAGATCAGAA+AGG + chr1_4:69640504-69640523 None:intergenic 30.0%
GATCTAAATGATCAAGAACT+CGG - chr1_4:69640508-69640527 Msa0181420:intron 30.0%
AAACCAATATGTAATTGTGC+AGG - chr1_4:69640650-69640669 Msa0181420:intron 30.0%
! TCTCTTGACAAATCTTTTGT+TGG - chr1_4:69640679-69640698 Msa0181420:intron 30.0%
! CTATTGGTTATTACCTTGAT+TGG + chr1_4:69640820-69640839 None:intergenic 30.0%
CAATCAAGGTAATAACCAAT+AGG - chr1_4:69640818-69640837 Msa0181420:CDS 30.0%
TTTGAACATAGGTTACCTAT+TGG + chr1_4:69640836-69640855 None:intergenic 30.0%
ATACAAAATAACAGCACATC+TGG + chr1_4:69640865-69640884 None:intergenic 30.0%
CTAATATGATATCGATCACA+TGG - chr1_4:69641087-69641106 Msa0181420:intron 30.0%
AAAAATTAAGAGCGGACATA+TGG - chr1_4:69641254-69641273 Msa0181420:intron 30.0%
! ATTTAGAATGCCATGTCATA+GGG + chr1_4:69641616-69641635 None:intergenic 30.0%
! TATTTAGAATGCCATGTCAT+AGG + chr1_4:69641617-69641636 None:intergenic 30.0%
TAGTAAATTACCTTCATCCA+TGG + chr1_4:69641791-69641810 None:intergenic 30.0%
!!! TGTTTTTTTATGCTGTAGTG+TGG - chr1_4:69641881-69641900 Msa0181420:intron 30.0%
GTTGTACATTATAGATGAGT+TGG + chr1_4:69641942-69641961 None:intergenic 30.0%
GTACAACAAGAAAATCATTC+AGG - chr1_4:69641955-69641974 Msa0181420:intron 30.0%
!!! TCTGATTATTTTGAATTGGG+TGG - chr1_4:69642050-69642069 Msa0181420:intron 30.0%
TTATGCAACAGGTATAATAC+AGG - chr1_4:69642206-69642225 Msa0181420:five_prime_UTR 30.0%
CCCTCACATTTATAAATCAT+AGG + chr1_4:69642287-69642306 None:intergenic 30.0%
ACTTTCTCCTATCTAAATGT+AGG - chr1_4:69642422-69642441 Msa0181420:five_prime_UTR 30.0%
CTTTCTCCTATCTAAATGTA+GGG - chr1_4:69642423-69642442 Msa0181420:five_prime_UTR 30.0%
TTTCTCCTATCTAAATGTAG+GGG - chr1_4:69642424-69642443 Msa0181420:five_prime_UTR 30.0%
! TCTCTTGACAAATCTTTTGT+TGG - chr1_4:69640679-69640698 Msa0181420:intron 30.0%
! TGCAAATATGTAAGCTTTTG+CGG + chr1_4:69642821-69642840 None:intergenic 30.0%
TACATATTTGCATATCCTGA+AGG - chr1_4:69642829-69642848 Msa0181420:five_prime_UTR 30.0%
! GATTTGGTTATTACCTTGAT+TGG + chr1_4:69642879-69642898 None:intergenic 30.0%
AGGTAATAACCAAATCCAAT+AGG - chr1_4:69642883-69642902 Msa0181420:five_prime_UTR 30.0%
CTTATGTTACCTATTGGATT+TGG + chr1_4:69642895-69642914 None:intergenic 30.0%
CTTAATTCTTCATGCAACTA+AGG + chr1_4:69642959-69642978 None:intergenic 30.0%
ATGAAGAATTAAGAGTGGAA+AGG - chr1_4:69642966-69642985 Msa0181420:five_prime_UTR 30.0%
!! ATTTGCTGTAACTGTATACA+AGG + chr1_4:69643010-69643029 None:intergenic 30.0%
TTGTATACAGTTACAGCAAA+TGG - chr1_4:69643009-69643028 Msa0181420:five_prime_UTR 30.0%
TGTATACAGTTACAGCAAAT+GGG - chr1_4:69643010-69643029 Msa0181420:five_prime_UTR 30.0%
TTCATTGGCATGTAAAATGT+TGG + chr1_4:69643060-69643079 None:intergenic 30.0%
TAGAAATTATTAAAGCCCTG+TGG - chr1_4:69643312-69643331 Msa0181420:five_prime_UTR 30.0%
! ATGACAGTATCTGAGTTTTA+TGG - chr1_4:69643517-69643536 Msa0181420:five_prime_UTR 30.0%
! TTATGTTTGATTTACGCAAC+AGG - chr1_4:69643550-69643569 Msa0181420:five_prime_UTR 30.0%
TTACGCAACAGGTATAATAA+AGG - chr1_4:69643561-69643580 Msa0181420:five_prime_UTR 30.0%
ACAGGTATAATAAAGGTGAT+TGG - chr1_4:69643568-69643587 Msa0181420:five_prime_UTR 30.0%
CAGGTATAATAAAGGTGATT+GGG - chr1_4:69643569-69643588 Msa0181420:five_prime_UTR 30.0%
!! AAGGACAAATGGTTGGTAAA+GGG + chr1_4:69637447-69637466 None:intergenic 35.0%
TGAAATGAAGGACAAATGGT+TGG + chr1_4:69637454-69637473 None:intergenic 35.0%
TAAGGTTAGATCAGATGATG+GGG + chr1_4:69637478-69637497 None:intergenic 35.0%
GATAAGGTTAGATCAGATGA+TGG + chr1_4:69637480-69637499 None:intergenic 35.0%
!!! ACTAGTTTTTCTTTGTGGTG+TGG + chr1_4:69637697-69637716 None:intergenic 35.0%
! CAGCTAAACAATTGAGTTGT+CGG + chr1_4:69637731-69637750 None:intergenic 35.0%
! GTTTTCATTGGAGCAATCAT+TGG - chr1_4:69637915-69637934 Msa0181420:CDS 35.0%
CTAGCCAAAAGAAAAACATG+TGG + chr1_4:69638014-69638033 None:intergenic 35.0%
! GCTAGTCAAGTTTTTATGGA+AGG - chr1_4:69638029-69638048 Msa0181420:intron 35.0%
!!! GAAGGTGTTGCATTTTCAAA+TGG - chr1_4:69638047-69638066 Msa0181420:intron 35.0%
ACAGGAACAAAAGCTCTTAT+TGG + chr1_4:69638083-69638102 None:intergenic 35.0%
! AAGGAGGATTTTCACTATTG+TGG - chr1_4:69638115-69638134 Msa0181420:CDS 35.0%
! GGATTTTCACTATTGTGGAT+TGG - chr1_4:69638120-69638139 Msa0181420:CDS 35.0%
GTTTAGAGATGAGATTTCCA+AGG - chr1_4:69638142-69638161 Msa0181420:CDS 35.0%
AGGAATGATTAGGTAGCTAT+AGG - chr1_4:69638325-69638344 Msa0181420:intron 35.0%
TATGTTGAAGATGAGATGTG+TGG + chr1_4:69638553-69638572 None:intergenic 35.0%
AAAGTCAATAGTGCAGATCA+TGG + chr1_4:69638746-69638765 None:intergenic 35.0%
TTCTAACAGCCATAATCACA+TGG + chr1_4:69639302-69639321 None:intergenic 35.0%
!!! ATGACGTCAATTTTAGCTGA+GGG + chr1_4:69639372-69639391 None:intergenic 35.0%
! TCGCAGTACCATCTTTATTT+AGG - chr1_4:69639499-69639518 Msa0181420:intron 35.0%
! TAAATTAAGTTAACGGACCC+AGG - chr1_4:69639874-69639893 Msa0181420:intron 35.0%
CCAGAAAACATTACTACTAC+TGG + chr1_4:69640031-69640050 None:intergenic 35.0%
! CCAGTAGTAGTAATGTTTTC+TGG - chr1_4:69640028-69640047 Msa0181420:intron 35.0%
GTAATTGCAAGAAACAATGC+AGG - chr1_4:69640062-69640081 Msa0181420:intron 35.0%
CTGTAGTTCAATGTTGTCTT+TGG + chr1_4:69640114-69640133 None:intergenic 35.0%
!! CTCTAAGATGAATTCCTATG+TGG - chr1_4:69640455-69640474 Msa0181420:intron 35.0%
ACACATATCAGGGAAAGAAA+TGG - chr1_4:69640607-69640626 Msa0181420:intron 35.0%
TGACCTGCACAATTACATAT+TGG + chr1_4:69640656-69640675 None:intergenic 35.0%
GGAAGAATTGTTAATGTCTC+TGG - chr1_4:69640740-69640759 Msa0181420:intron 35.0%
! AATTGTTAATGTCTCTGGAG+AGG - chr1_4:69640745-69640764 Msa0181420:intron 35.0%
GGCTTACACATTTGCATATT+CGG - chr1_4:69640766-69640785 Msa0181420:intron 35.0%
TACACATTTGCATATTCGGA+AGG - chr1_4:69640770-69640789 Msa0181420:intron 35.0%
! TCTGGTGATGATTTGAACAT+AGG + chr1_4:69640847-69640866 None:intergenic 35.0%
GTGATCGATATCATATTAGC+AGG + chr1_4:69641086-69641105 None:intergenic 35.0%
TTAAAACGATTGTCTCACCA+TGG - chr1_4:69641224-69641243 Msa0181420:intron 35.0%
! CTTAATTTTTCATGCAGCCA+TGG + chr1_4:69641244-69641263 None:intergenic 35.0%
GCTGCATGAAAAATTAAGAG+CGG - chr1_4:69641246-69641265 Msa0181420:intron 35.0%
TACAACAAACAGAGTGCATA+TGG - chr1_4:69641306-69641325 Msa0181420:intron 35.0%
! TCACTTGTTACATCTTGATC+AGG - chr1_4:69641448-69641467 Msa0181420:intron 35.0%
TTACATCTTGATCAGGATGA+TGG - chr1_4:69641455-69641474 Msa0181420:intron 35.0%
TACATCTTGATCAGGATGAT+GGG - chr1_4:69641456-69641475 Msa0181420:intron 35.0%
ATTGTGAATTCTCTTCATCC+AGG - chr1_4:69641488-69641507 Msa0181420:intron 35.0%
GTACAAGATAATAGTTACCG+TGG + chr1_4:69641553-69641572 None:intergenic 35.0%
ATCATTAAAGCCCTATGACA+TGG - chr1_4:69641603-69641622 Msa0181420:CDS 35.0%
CATTGTAAAATCCACGATAG+TGG + chr1_4:69641673-69641692 None:intergenic 35.0%
TAATTCTCTTTCTCAGACCA+TGG - chr1_4:69641771-69641790 Msa0181420:intron 35.0%
CGTGAATTAAGAAACGTAGT+TGG + chr1_4:69641847-69641866 None:intergenic 35.0%
! TTTGAATTGGGTGGTTTTTC+TGG - chr1_4:69642059-69642078 Msa0181420:CDS 35.0%
!! TGGTTTGTTTGTTTGCACAT+TGG - chr1_4:69642079-69642098 Msa0181420:CDS 35.0%
ACAGGTATAATACAGGTGAT+TGG - chr1_4:69642213-69642232 Msa0181420:five_prime_UTR 35.0%
CAGGTATAATACAGGTGATT+GGG - chr1_4:69642214-69642233 Msa0181420:five_prime_UTR 35.0%
TGTGATGAAAAATGTTCAGC+AGG - chr1_4:69642242-69642261 Msa0181420:five_prime_UTR 35.0%
GGGTCGTGTCAAATAAATAT+TGG - chr1_4:69642304-69642323 Msa0181420:five_prime_UTR 35.0%
TTCTCCTATCTAAATGTAGG+GGG - chr1_4:69642425-69642444 Msa0181420:five_prime_UTR 35.0%
GCACATGAAAGTAAGAAAGA+AGG - chr1_4:69642778-69642797 Msa0181420:five_prime_UTR 35.0%
GTTGCATGAAGAATTAAGAG+TGG - chr1_4:69642961-69642980 Msa0181420:five_prime_UTR 35.0%
AAGAATTAAGAGTGGAAAGG+TGG - chr1_4:69642969-69642988 Msa0181420:five_prime_UTR 35.0%
CTGTAACTGTATACAAGGAA+GGG + chr1_4:69643005-69643024 None:intergenic 35.0%
GTATACAGTTACAGCAAATG+GGG - chr1_4:69643011-69643030 Msa0181420:five_prime_UTR 35.0%
! TCACTTGTTACATCTTGATC+AGG - chr1_4:69641448-69641467 Msa0181420:intron 35.0%
ATTGTGAATTCTCTTCATCC+AGG - chr1_4:69641488-69641507 Msa0181420:intron 35.0%
!! AAATGGTTGGTAAAGGGGTA+AGG + chr1_4:69637441-69637460 None:intergenic 40.0%
!! AGGACAAATGGTTGGTAAAG+GGG + chr1_4:69637446-69637465 None:intergenic 40.0%
!! GAAGGACAAATGGTTGGTAA+AGG + chr1_4:69637448-69637467 None:intergenic 40.0%
GGGTTGAAATGAAGGACAAA+TGG + chr1_4:69637458-69637477 None:intergenic 40.0%
!! AGATGATGGGGTTGAAATGA+AGG + chr1_4:69637466-69637485 None:intergenic 40.0%
TGAGAGGGAGTAGAAAGATA+AGG + chr1_4:69637496-69637515 None:intergenic 40.0%
GAGCTACACACAAAAATGTC+TGG - chr1_4:69637561-69637580 Msa0181420:intron 40.0%
CTACACACAAAAATGTCTGG+TGG - chr1_4:69637564-69637583 Msa0181420:intron 40.0%
ACAAAAATGTCTGGTGGAGT+TGG - chr1_4:69637570-69637589 Msa0181420:intron 40.0%
! AATTGAGTTGTCGGAATGAG+AGG + chr1_4:69637722-69637741 None:intergenic 40.0%
!! ATGGTTAGCCCTGAAGATTT+TGG - chr1_4:69637777-69637796 Msa0181420:intron 40.0%
!! TGTTCTTTTGAAGGGTGAGA+TGG + chr1_4:69637855-69637874 None:intergenic 40.0%
AGAGATGAGATTTCCAAGGT+TGG - chr1_4:69638146-69638165 Msa0181420:CDS 40.0%
! CTGTGGCTAATATGGCTTTT+TGG - chr1_4:69638219-69638238 Msa0181420:intron 40.0%
AATAACCAGCAGAGAAGTCA+TGG + chr1_4:69638412-69638431 None:intergenic 40.0%
CATTGGAATGCGTTCTTATC+AGG - chr1_4:69638518-69638537 Msa0181420:intron 40.0%
GAAATCCCTTTCTTCCTGAA+TGG + chr1_4:69638815-69638834 None:intergenic 40.0%
TTCAGGAAGAAAGGGATTTC+TGG - chr1_4:69638815-69638834 Msa0181420:intron 40.0%
! AAAGGGATTTCTGGATTCTC+AGG - chr1_4:69638824-69638843 Msa0181420:intron 40.0%
! AAGGGATTTCTGGATTCTCA+GGG - chr1_4:69638825-69638844 Msa0181420:intron 40.0%
ACTGCTGAACAAGTTACTCA+TGG - chr1_4:69638854-69638873 Msa0181420:intron 40.0%
ACTCATGGAATTGATGCAAC+TGG - chr1_4:69638869-69638888 Msa0181420:intron 40.0%
CTACTATTCAACAAAGGGCA+TGG + chr1_4:69638967-69638986 None:intergenic 40.0%
CTGCTGAAATTTGCATAGTC+AGG - chr1_4:69639130-69639149 Msa0181420:intron 40.0%
!!! CATGACGTCAATTTTAGCTG+AGG + chr1_4:69639373-69639392 None:intergenic 40.0%
CTCAGCTAAAATTGACGTCA+TGG - chr1_4:69639371-69639390 Msa0181420:intron 40.0%
GGAGTTAGATCTCAGTTCAA+TGG - chr1_4:69639392-69639411 Msa0181420:intron 40.0%
AAGACCAGAGGAGTTGAATT+CGG + chr1_4:69639439-69639458 None:intergenic 40.0%
TGTAAGAAAAGGAACCGACA+TGG - chr1_4:69639475-69639494 Msa0181420:CDS 40.0%
GATAAAGGGCTAACTTGACA+CGG - chr1_4:69639821-69639840 Msa0181420:intron 40.0%
AACTGGAACACAGATACTCA+TGG + chr1_4:69639976-69639995 None:intergenic 40.0%
TGTCTTTGGACAGCATGAAA+GGG + chr1_4:69640100-69640119 None:intergenic 40.0%
TTGTCTTTGGACAGCATGAA+AGG + chr1_4:69640101-69640120 None:intergenic 40.0%
CACAAACCACTTAGGTATGT+GGG - chr1_4:69640139-69640158 Msa0181420:intron 40.0%
ATATTGCCCACATACCTAAG+TGG + chr1_4:69640148-69640167 None:intergenic 40.0%
ACACACACACACACATATCA+GGG - chr1_4:69640597-69640616 Msa0181420:intron 40.0%
GCACACGAAAGTAAGAAAGA+AGG - chr1_4:69640719-69640738 Msa0181420:intron 40.0%
! TGGGAAATCGGCTTTACTAT+TGG - chr1_4:69640968-69640987 Msa0181420:intron 40.0%
! CATCGTTATCAGCAGGTTTT+TGG + chr1_4:69641139-69641158 None:intergenic 40.0%
! CAAAAACCTGCTGATAACGA+TGG - chr1_4:69641137-69641156 Msa0181420:intron 40.0%
CTCATTTCAACGAGTACTAC+AGG + chr1_4:69641173-69641192 None:intergenic 40.0%
CTGTAGTACTCGTTGAAATG+AGG - chr1_4:69641171-69641190 Msa0181420:intron 40.0%
ACATCTTGATCAGGATGATG+GGG - chr1_4:69641457-69641476 Msa0181420:intron 40.0%
AGATTGGTGAGAATGATTCC+TGG + chr1_4:69641509-69641528 None:intergenic 40.0%
ATAACAACGGTAGGTAATGC+AGG + chr1_4:69641647-69641666 None:intergenic 40.0%
! ACGATAGTGGCACATAACAA+CGG + chr1_4:69641660-69641679 None:intergenic 40.0%
GAATGAGTGGTGAAAGTTAG+TGG + chr1_4:69642004-69642023 None:intergenic 40.0%
! TTGTCAAAACGGATTCCTTC+AGG + chr1_4:69640788-69640807 None:intergenic 40.0%
GCTGTAACTGTATACAAGGA+AGG + chr1_4:69643006-69643025 None:intergenic 40.0%
TTACATCTTGATCAGGCTGA+TGG - chr1_4:69643169-69643188 Msa0181420:five_prime_UTR 40.0%
TACATCTTGATCAGGCTGAT+GGG - chr1_4:69643170-69643189 Msa0181420:five_prime_UTR 40.0%
AGATTGGTGAGAATGATTCC+TGG + chr1_4:69641509-69641528 None:intergenic 40.0%
ACCAATCTTTCCCGACATAT+GGG - chr1_4:69643235-69643254 Msa0181420:five_prime_UTR 40.0%
ATTATTAAAGCCCTGTGGCA+TGG - chr1_4:69643317-69643336 Msa0181420:five_prime_UTR 40.0%
! ATTTAGAATGCCATGCCACA+GGG + chr1_4:69643330-69643349 None:intergenic 40.0%
CATTATCTACGGTTGTTGTG+TGG - chr1_4:69643363-69643382 Msa0181420:five_prime_UTR 40.0%
! GCACTATCGTGGATTTTACA+AGG - chr1_4:69643385-69643404 Msa0181420:five_prime_UTR 40.0%
GTTGTTGTCTTATCAGCCAG+TGG - chr1_4:69637753-69637772 Msa0181420:CDS 45.0%
ACTATGCTCTTCACCAACCT+TGG + chr1_4:69638162-69638181 None:intergenic 45.0%
!! AAGGTTGGTGAAGAGCATAG+TGG - chr1_4:69638161-69638180 Msa0181420:CDS 45.0%
!! AGCACTTGCTGTGGCTAATA+TGG - chr1_4:69638211-69638230 Msa0181420:CDS 45.0%
TTGAACCATGACTTCTCTGC+TGG - chr1_4:69638404-69638423 Msa0181420:intron 45.0%
TTACCATCATGTGGCCATTC+AGG - chr1_4:69638798-69638817 Msa0181420:intron 45.0%
ATGTGGCCATTCAGGAAGAA+AGG - chr1_4:69638806-69638825 Msa0181420:intron 45.0%
TGTGGCCATTCAGGAAGAAA+GGG - chr1_4:69638807-69638826 Msa0181420:intron 45.0%
GGATATGATGGCATGGTAAC+AGG - chr1_4:69639222-69639241 Msa0181420:intron 45.0%
AGTCTCAACTCCAATACCAC+TGG + chr1_4:69639253-69639272 None:intergenic 45.0%
! TGTGACCTCATTGTTGTTCG+AGG - chr1_4:69639690-69639709 Msa0181420:intron 45.0%
! GTGACCTCATTGTTGTTCGA+GGG - chr1_4:69639691-69639710 Msa0181420:intron 45.0%
TAGACCCTCGAACAACAATG+AGG + chr1_4:69639698-69639717 None:intergenic 45.0%
CAGTTTGCCACAAACCACTT+AGG - chr1_4:69640131-69640150 Msa0181420:intron 45.0%
CCACATACCTAAGTGGTTTG+TGG + chr1_4:69640141-69640160 None:intergenic 45.0%
CCACAAACCACTTAGGTATG+TGG - chr1_4:69640138-69640157 Msa0181420:intron 45.0%
AGAGAAAAGGAGACATGCAC+TGG - chr1_4:69640267-69640286 Msa0181420:CDS 45.0%
!! AGTTACAAAGGGTGCTTCCA+TGG - chr1_4:69640357-69640376 Msa0181420:intron 45.0%
GTGTGTGTGTGTAGTGAAGT+AGG + chr1_4:69640577-69640596 None:intergenic 45.0%
CACACACACACACACATATC+AGG - chr1_4:69640596-69640615 Msa0181420:intron 45.0%
! TTTCGGTTTTCTGCGAGTCT+TGG - chr1_4:69641026-69641045 Msa0181420:intron 45.0%
ACCAATCTTTCCCGCCATAT+GGG - chr1_4:69641521-69641540 Msa0181420:CDS 45.0%
! TACCGTGGATTACACCCATA+TGG + chr1_4:69641538-69641557 None:intergenic 45.0%
TAGTGGCACATAACAACGGT+AGG + chr1_4:69641656-69641675 None:intergenic 45.0%
! GTTGTTATGTGCCACTATCG+TGG - chr1_4:69641659-69641678 Msa0181420:CDS 45.0%
CTTTCTCAGACCATGGATGA+AGG - chr1_4:69641778-69641797 Msa0181420:intron 45.0%
! GTGAAAGTTAGTGGACAGAC+TGG + chr1_4:69641995-69642014 None:intergenic 45.0%
CAATGCTACATAGCAGGTTG+TGG + chr1_4:69642454-69642473 None:intergenic 45.0%
TACAGCAAATGGGGTGCATA+TGG - chr1_4:69643020-69643039 Msa0181420:five_prime_UTR 45.0%
! GAGGCATCTTGCAAGTTCAT+TGG + chr1_4:69643075-69643094 None:intergenic 45.0%
TGAACTTGCAAGATGCCTCA+AGG - chr1_4:69643076-69643095 Msa0181420:five_prime_UTR 45.0%
AGAGAAACTAGCACACCTTG+AGG + chr1_4:69643094-69643113 None:intergenic 45.0%
ACATCTTGATCAGGCTGATG+GGG - chr1_4:69643171-69643190 Msa0181420:five_prime_UTR 45.0%
CACCAATCTTTCCCGACATA+TGG - chr1_4:69643234-69643253 Msa0181420:five_prime_UTR 45.0%
ACCCATATGTCGGGAAAGAT+TGG + chr1_4:69643239-69643258 None:intergenic 45.0%
! CATTTAGAATGCCATGCCAC+AGG + chr1_4:69643331-69643350 None:intergenic 45.0%
!! AAATGAAAAAAATAAAAAAA+TGG + chr1_4:69638939-69638958 None:intergenic 5.0%
TGGTAAAGGGGTAAGGTTCG+TGG + chr1_4:69637434-69637453 None:intergenic 50.0%
AGGCTAATGTCACAGCCAGT+TGG + chr1_4:69637597-69637616 None:intergenic 50.0%
TGTCTTATCAGCCAGTGGCA+TGG - chr1_4:69637758-69637777 Msa0181420:CDS 50.0%
CTTCCTGAATGGCCACATGA+TGG + chr1_4:69638804-69638823 None:intergenic 50.0%
GGTCTCACTGCTATTGTCAC+TGG - chr1_4:69638890-69638909 Msa0181420:intron 50.0%
ATGGTAACAGGAGCAACCAG+TGG - chr1_4:69639234-69639253 Msa0181420:intron 50.0%
ACAGGAGCAACCAGTGGTAT+TGG - chr1_4:69639240-69639259 Msa0181420:intron 50.0%
GCGTGGTGTCCATGTGATTA+TGG - chr1_4:69639290-69639309 Msa0181420:intron 50.0%
GCATCCGAATTCAACTCCTC+TGG - chr1_4:69639432-69639451 Msa0181420:CDS 50.0%
GATGTTCAACGGAAGACCAG+AGG + chr1_4:69639451-69639470 None:intergenic 50.0%
GATGGTACTGCGATCCATGT+CGG + chr1_4:69639492-69639511 None:intergenic 50.0%
! TAAGTTAACGGACCCAGGTG+CGG - chr1_4:69639879-69639898 Msa0181420:intron 50.0%
TAAAAGGCGAATCCGCACCT+GGG + chr1_4:69639894-69639913 None:intergenic 50.0%
ATAAAAGGCGAATCCGCACC+TGG + chr1_4:69639895-69639914 None:intergenic 50.0%
CATCACAGTTGCTCCCACAT+AGG + chr1_4:69640472-69640491 None:intergenic 50.0%
ACGACTCCATCGTTATCAGC+AGG + chr1_4:69641146-69641165 None:intergenic 50.0%
AGAGAGACTAGCACACCTTG+AGG + chr1_4:69641380-69641399 None:intergenic 50.0%
!! TCTTGATCAGGATGATGGGG+TGG - chr1_4:69641460-69641479 Msa0181420:intron 50.0%
CACCAATCTTTCCCGCCATA+TGG - chr1_4:69641520-69641539 Msa0181420:CDS 50.0%
! ACCCATATGGCGGGAAAGAT+TGG + chr1_4:69641525-69641544 None:intergenic 50.0%
! GTGGATTACACCCATATGGC+GGG + chr1_4:69641534-69641553 None:intergenic 50.0%
! CGTGGATTACACCCATATGG+CGG + chr1_4:69641535-69641554 None:intergenic 50.0%
CGCCATATGGGTGTAATCCA+CGG - chr1_4:69641533-69641552 Msa0181420:CDS 50.0%
GCTGCCCCCTACATTTAGAT+AGG + chr1_4:69642432-69642451 None:intergenic 50.0%
TGGGTGCAATGCTACATAGC+AGG + chr1_4:69642460-69642479 None:intergenic 50.0%
GTCGAGTACACCCATATGTC+GGG + chr1_4:69643248-69643267 None:intergenic 50.0%
CGTCGAGTACACCCATATGT+CGG + chr1_4:69643249-69643268 None:intergenic 50.0%
CGACATATGGGTGTACTCGA+CGG - chr1_4:69643247-69643266 Msa0181420:five_prime_UTR 50.0%
GTTGTTGTGTGGCACTATCG+TGG - chr1_4:69643374-69643393 Msa0181420:five_prime_UTR 50.0%
TCTGGTGGAGTTGGACCAAC+TGG - chr1_4:69637579-69637598 Msa0181420:intron 55.0%
TTCAGGGCTAACCATGCCAC+TGG + chr1_4:69637772-69637791 None:intergenic 55.0%
!! TGCTGGAAGAGCACTTGCTG+TGG - chr1_4:69638202-69638221 Msa0181420:CDS 55.0%
ACGCGTGTTCTTGCTTTGCG+TGG - chr1_4:69639273-69639292 Msa0181420:intron 55.0%
! GAGGCGTCTTGCAAGCTCAT+TGG + chr1_4:69641361-69641380 None:intergenic 55.0%
TGAGCTTGCAAGACGCCTCA+AGG - chr1_4:69641362-69641381 Msa0181420:intron 55.0%
TCTTGATCAGGCTGATGGGG+TGG - chr1_4:69643174-69643193 Msa0181420:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 69637348 69643618 69637348 ID=Msa0181420;Name=Msa0181420
chr1_4 mRNA 69637348 69643618 69637348 ID=Msa0181420-mRNA-1;Parent=Msa0181420;Name=Msa0181420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1458|0.7|0.63|1|0.8|0.90|11|0|379
chr1_4 exon 69637348 69637394 69637348 ID=Msa0181420-mRNA-1:exon:23174;Parent=Msa0181420-mRNA-1
chr1_4 exon 69637698 69637782 69637698 ID=Msa0181420-mRNA-1:exon:23173;Parent=Msa0181420-mRNA-1
chr1_4 exon 69637869 69637947 69637869 ID=Msa0181420-mRNA-1:exon:23172;Parent=Msa0181420-mRNA-1
chr1_4 exon 69638082 69638235 69638082 ID=Msa0181420-mRNA-1:exon:23171;Parent=Msa0181420-mRNA-1
chr1_4 exon 69638703 69638738 69638703 ID=Msa0181420-mRNA-1:exon:23170;Parent=Msa0181420-mRNA-1
chr1_4 exon 69639412 69639496 69639412 ID=Msa0181420-mRNA-1:exon:23169;Parent=Msa0181420-mRNA-1
chr1_4 exon 69639583 69639661 69639583 ID=Msa0181420-mRNA-1:exon:23168;Parent=Msa0181420-mRNA-1
chr1_4 exon 69640141 69640294 69640141 ID=Msa0181420-mRNA-1:exon:23167;Parent=Msa0181420-mRNA-1
chr1_4 exon 69640814 69640893 69640814 ID=Msa0181420-mRNA-1:exon:23166;Parent=Msa0181420-mRNA-1
chr1_4 exon 69641491 69641722 69641491 ID=Msa0181420-mRNA-1:exon:23165;Parent=Msa0181420-mRNA-1
chr1_4 exon 69642055 69643618 69642055 ID=Msa0181420-mRNA-1:exon:23164;Parent=Msa0181420-mRNA-1
chr1_4 five_prime_UTR 69642161 69643618 69642161 ID=Msa0181420-mRNA-1:five_prime_utr;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69642055 69642160 69642055 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69641491 69641722 69641491 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69640814 69640893 69640814 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69640141 69640294 69640141 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69639583 69639661 69639583 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69639412 69639496 69639412 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69638703 69638738 69638703 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69638082 69638235 69638082 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69637869 69637947 69637869 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69637698 69637782 69637698 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
chr1_4 CDS 69637348 69637394 69637348 ID=Msa0181420-mRNA-1:cds;Parent=Msa0181420-mRNA-1
Gene Sequence

>Msa0181420

ATGTGGCCATTCAGGAAGAAAGGGATTTCTGGATTCTCAGGGAGTTCAACTGCTGAACAAGTTACTCATGGAATTGATGCAACTGGTCTCACTGCTATTGTCACTGGAGCAACCAGTGGTATTGGAGTTGAGACTACGCGTGTTCTTGCTTTGCGTGGTGTCCATGTGATTATGGCTGTTAGAAATATGGTTGCTGCTAATGATATCAAAGCAGCAATACTTAAGGAGATTCCCTCAGCTAAAATTGACGTCATGGAGTTAGATCTCAGTTCAATGGAATCTGTCAAGAAATTTGCATCCGAATTCAACTCCTCTGGTCTTCCGTTGAACATCTTGATAAACAATGCAGGAATCATGTCATGCCCTTTCATGCTGTCCAAAGACAACATTGAACTACAGTTTGCCACAAACCACTTAGGTCATTTTCTCTTGACAAATCTTTTGTTGGACACAATGACGAAAACAGCACACGAAAGTAAGAAAGAAGGAAGAATTGTTAATGTCTCTGGAGAGGCTTACACATTTGCATATTCGGAAGGAATCCGTTTTGACAAAATTAATGACCAATCAAGTTACAACAAACAGAGTGCATATGGACAGTCAAAGCTTGCTAACATTTTACATGCCAATGAGCTTGCAAGACGCCTCAAGGATGATGGGGTGGATATCATTGTGAATTCTCTTCATCCAGGAATCATTCTCACCAATCTTTCCCGCCATATGGGTGTAATCCACGGTGATTGGGAAACTTGTGATGAAAAATGTTCAGCAGGTCATTTTCTCTTGACAAATCTTTTGTTGGACACAATGAAGAAAACAGCACATGAAAGTAAGAAAGAAGGAAGAATTGTCAATGTCTCCGCAAAAGCTTACATATTTGCATATCCTGAAGGAATCCGTTTTGACAAAATTAATGACCAATCAAGTTACAGCAAATGGGGTGCATATGGACAGTCAAAGCTTGCCAACATTTTACATGCCAATGAACTTGCAAGATGCCTCAAGGCTGATGGGGTGGATATCATTGTGAATTCTCTTCATCCAGGAATCATTCTCACCAATCTTTCCCGACATATGGGTGTACTCGACGGTATAATAAAGGTGATTGGGAAATTTGTGATGAAAAATGTTCAGCAG
Protein sequence

>Msa0181420

MWPFRKKGISGFSGSSTAEQVTHGIDATGLTAIVTGATSGIGVETTRVLALRGVHVIMAVRNMVAANDIKAAILKEIPSAKIDVMELDLSSMESVKKFASEFNSSGLPLNILINNAGIMSCPFMLSKDNIELQFATNHLGHFLLTNLLLDTMTKTAHESKKEGRIVNVSGEAYTFAYSEGIRFDKINDQSSYNKQSAYGQSKLANILHANELARRLKDDGVDIIVNSLHPGIILTNLSRHMGVIHGDWETCDEKCSAGHFLLTNLLLDTMKKTAHESKKEGRIVNVSAKAYIFAYPEGIRFDKINDQSSYSKWGAYGQSKLANILHANELARCLKADGVDIIVNSLHPGIILTNLSRHMGVLDGIIKVIGKFVMKNVQQ