Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136480 | sp|Q93ZR1|ELP3_ARATH | 91.327 | 565 | 47 | 1 | 1 | 563 | 1 | 565 | 0.0 | 1087 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136480 | A0A072W1A9 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0136480 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0136480 | Msa1397500 | 0.957230 | 4.477352e-115 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136480 | MtrunA17_Chr1g0207811 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136480 | AT5G50320.1 | 91.327 | 565 | 47 | 1 | 1 | 563 | 1 | 565 | 0.0 | 1087 |
Find 207 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGTGAGCTCCATGTTTA+TGG | 0.142211 | 1_3:+68360863 | Msa0136480:CDS |
| TCAGGTTGAGTTTATATTAA+TGG | 0.195676 | 1_3:+68358170 | Msa0136480:intron |
| CACTACTTGTCCAGAGCTTA+TGG | 0.210436 | 1_3:+68360826 | Msa0136480:CDS |
| ACGCCATTACTACAGAAAAT+TGG | 0.214514 | 1_3:+68361280 | Msa0136480:CDS |
| CGAACAAGTTCCACCTCTTC+TGG | 0.222979 | 1_3:-68360451 | None:intergenic |
| ACTAAGATAGCTGTAATTTC+TGG | 0.226240 | 1_3:+68361248 | Msa0136480:CDS |
| GACGGGTTTGGCTCGGAGTT+TGG | 0.246198 | 1_3:-68357685 | None:intergenic |
| ATTACCGTGATTACTTTATA+AGG | 0.254776 | 1_3:+68358220 | Msa0136480:CDS |
| ACTTGTTCGTCGTGATTATA+TGG | 0.272919 | 1_3:+68360465 | Msa0136480:CDS |
| TGCAATCATCTCAACAAGTT+TGG | 0.275543 | 1_3:-68357628 | None:intergenic |
| CCAATGCCTTTGGTGACCTC+TGG | 0.281758 | 1_3:+68360189 | Msa0136480:CDS |
| CAGGTTGAGTTTATATTAAT+GGG | 0.294302 | 1_3:+68358171 | Msa0136480:intron |
| GGGTTATGGTACACTTCTTA+TGG | 0.305200 | 1_3:+68361187 | Msa0136480:intron |
| CTACCTCTTGTCTGCACATA+AGG | 0.308325 | 1_3:-68358008 | None:intergenic |
| CCACCTCTTCTGGTTTAATC+TGG | 0.319149 | 1_3:-68360441 | None:intergenic |
| ACGGGTTTGGCTCGGAGTTT+GGG | 0.323050 | 1_3:-68357684 | None:intergenic |
| CTTGAGCAGGATATCCTTGT+TGG | 0.326582 | 1_3:+68360773 | Msa0136480:intron |
| AATTATTGTTAACAGGGTTA+TGG | 0.336285 | 1_3:+68361173 | Msa0136480:intron |
| TTACTGATTATTATTACATT+AGG | 0.340713 | 1_3:-68361337 | None:intergenic |
| ATTGATCAGCTTAAGCGTTT+AGG | 0.349355 | 1_3:+68358032 | Msa0136480:CDS |
| AGTACTGCAAATTAAGATAC+TGG | 0.351299 | 1_3:+68361505 | Msa0136480:three_prime_UTR |
| AAACCCGTCCGAACCGCATC+TGG | 0.355392 | 1_3:+68357699 | Msa0136480:CDS |
| CTTTATGAGCTCTGGAAAAC+TGG | 0.356965 | 1_3:+68359939 | Msa0136480:CDS |
| CAATGCCTTTGGTGACCTCT+GGG | 0.357014 | 1_3:+68360190 | Msa0136480:CDS |
| ACTCTTGTAATACGTGGAAC+TGG | 0.357820 | 1_3:+68359915 | Msa0136480:CDS |
| GTTTAAAATGTCGCGATGTT+CGG | 0.368009 | 1_3:+68360265 | Msa0136480:CDS |
| GGGTTGAGAAAGGGAATCTA+AGG | 0.374003 | 1_3:+68360211 | Msa0136480:CDS |
| ATTAGGTATTTCATCATGTA+AGG | 0.374054 | 1_3:-68361320 | None:intergenic |
| AGGAGGCCAGATTATTGTCT+TGG | 0.377113 | 1_3:+68359250 | Msa0136480:intron |
| AATCTTCATGATGCTTTGTC+TGG | 0.377549 | 1_3:+68358243 | Msa0136480:CDS |
| CAGTACTAGCTTACAGAGAA+TGG | 0.381874 | 1_3:-68361489 | None:intergenic |
| TACCTGGATTCCAGCTTCTC+TGG | 0.383322 | 1_3:-68360289 | None:intergenic |
| TCTGCTGCGTGCCGTAAGTA+TGG | 0.383722 | 1_3:+68357591 | Msa0136480:CDS |
| TCCCTTTCAACACCAACATT+TGG | 0.384171 | 1_3:-68359825 | None:intergenic |
| TGGAACTTTCATGTCCCTTC+CGG | 0.386776 | 1_3:+68358194 | Msa0136480:CDS |
| GGAACTGCTGTACCGGTTCA+TGG | 0.389741 | 1_3:+68360884 | Msa0136480:CDS |
| AGAACCTCTCGTTCGGAGTC+TGG | 0.399137 | 1_3:-68357657 | None:intergenic |
| CTAAGATAGCTGTAATTTCT+GGG | 0.402023 | 1_3:+68361249 | Msa0136480:CDS |
| CGCCATTACTACAGAAAATT+GGG | 0.402981 | 1_3:+68361281 | Msa0136480:CDS |
| CTGAGTACTGTATTCAAAAT+CGG | 0.405571 | 1_3:-68357817 | None:intergenic |
| ATATCCTTGTTGGTTTGTTA+CGG | 0.406404 | 1_3:+68360783 | Msa0136480:CDS |
| GCGGGATATTCCAATGCCTT+TGG | 0.406417 | 1_3:+68360179 | Msa0136480:CDS |
| GGCTAAAGATGCCGGTTTCA+AGG | 0.407082 | 1_3:+68359405 | Msa0136480:CDS |
| CAAGTTGCAACAATGCTATA+TGG | 0.408186 | 1_3:-68361623 | None:intergenic |
| GCAATCATCTCAACAAGTTT+GGG | 0.412290 | 1_3:-68357627 | None:intergenic |
| CCTGGGAAAGGAGGCTTTGA+AGG | 0.415150 | 1_3:+68357459 | Msa0136480:CDS |
| AGATGCGGTTCGGACGGGTT+TGG | 0.419639 | 1_3:-68357697 | None:intergenic |
| GAGCATTGAGATCAACTTTG+TGG | 0.431098 | 1_3:-68357563 | None:intergenic |
| CAACATCCTCGTAAGTGCTT+TGG | 0.432775 | 1_3:-68359327 | None:intergenic |
| AAAATATGAATGCCTTATGA+TGG | 0.435686 | 1_3:-68361444 | None:intergenic |
| GTGACCTCTGGGGTTGAGAA+AGG | 0.437552 | 1_3:+68360201 | Msa0136480:CDS |
| GGAGGCCAGATTATTGTCTT+GGG | 0.438031 | 1_3:+68359251 | Msa0136480:intron |
| TTCTTACGGTTGTACACGAT+TGG | 0.440324 | 1_3:+68359294 | Msa0136480:CDS |
| ACACCAACATTTGGAAGATC+AGG | 0.441020 | 1_3:-68359816 | None:intergenic |
| ATTATATGGCAAATGAAGGT+TGG | 0.442902 | 1_3:+68360479 | Msa0136480:CDS |
| TGCTCGAATTGCACGCATAC+TGG | 0.443181 | 1_3:-68357862 | None:intergenic |
| TAGGTTAATCTATTAAAGTT+CGG | 0.447850 | 1_3:-68361552 | None:intergenic |
| GTGCTTGGAGTTATCGAGAA+TGG | 0.452767 | 1_3:+68357398 | Msa0136480:exon |
| TGCTGTACCGGTTCATGGGC+GGG | 0.453368 | 1_3:+68360889 | Msa0136480:CDS |
| GGTTGTACACGATTGGAGAT+TGG | 0.457491 | 1_3:+68359301 | Msa0136480:CDS |
| TCAGAATCCCGCCCATGAAC+CGG | 0.459387 | 1_3:-68360896 | None:intergenic |
| GACACAAATGTTACCGGTGG+TGG | 0.462023 | 1_3:-68357772 | None:intergenic |
| CGGTTCGGACGGGTTTGGCT+CGG | 0.462397 | 1_3:-68357692 | None:intergenic |
| TTCCAAATGTTGGTGTTGAA+AGG | 0.463184 | 1_3:+68359823 | Msa0136480:CDS |
| GCAGTAGACACAAATGTTAC+CGG | 0.465327 | 1_3:-68357778 | None:intergenic |
| ACTACTTGTCCAGAGCTTAT+GGG | 0.466121 | 1_3:+68360827 | Msa0136480:CDS |
| TCCAAATGTTGGTGTTGAAA+GGG | 0.466271 | 1_3:+68359824 | Msa0136480:CDS |
| TTACAGAGAATGGGAGGTAA+TGG | 0.474543 | 1_3:-68361479 | None:intergenic |
| AAATCGGAGTCAGGACCGCC+AGG | 0.474986 | 1_3:-68357801 | None:intergenic |
| TTATATGGCAAATGAAGGTT+GGG | 0.475457 | 1_3:+68360480 | Msa0136480:CDS |
| GGGTGCAGTCGTACCAGAGA+GGG | 0.477885 | 1_3:-68356912 | None:intergenic |
| CCAGAGGTCACCAAAGGCAT+TGG | 0.478943 | 1_3:-68360189 | None:intergenic |
| AGTCCCTTGTTTAGAGCAGA+TGG | 0.482729 | 1_3:+68359876 | Msa0136480:CDS |
| TACAGAGAATGGGAGGTAAT+GGG | 0.482797 | 1_3:-68361478 | None:intergenic |
| AACATTTGTGTCTACTGCCC+TGG | 0.483658 | 1_3:+68357783 | Msa0136480:CDS |
| CCTTCAAAGCCTCCTTTCCC+AGG | 0.487403 | 1_3:-68357459 | None:intergenic |
| GAACTGGGCTTTATGAGCTC+TGG | 0.487484 | 1_3:+68359931 | Msa0136480:CDS |
| CTCTTGTAATACGTGGAACT+GGG | 0.488163 | 1_3:+68359916 | Msa0136480:CDS |
| GGGAAGAAGAACCTCTCGTT+CGG | 0.489882 | 1_3:-68357664 | None:intergenic |
| CTGTATTCAAAATCGGAGTC+AGG | 0.494942 | 1_3:-68357810 | None:intergenic |
| GGCAACTGCAATGGTGGCAG+AGG | 0.495159 | 1_3:+68357419 | Msa0136480:CDS |
| TACCTCTTGTCTGCACATAA+GGG | 0.499999 | 1_3:-68358007 | None:intergenic |
| ACAGTAACAAACCTTGAAAC+CGG | 0.500422 | 1_3:-68359416 | None:intergenic |
| TGTTTATGGAACTGCTGTAC+CGG | 0.502199 | 1_3:+68360877 | Msa0136480:CDS |
| TGAGGCCCAAGACAATAATC+TGG | 0.507785 | 1_3:-68359256 | None:intergenic |
| AGTGAGCGATAGTGTGAGGA+AGG | 0.508703 | 1_3:-68356966 | None:intergenic |
| TATTCCAGATGCGGTTCGGA+CGG | 0.509432 | 1_3:-68357703 | None:intergenic |
| ATAGCTGTAATTTCTGGGGT+TGG | 0.510369 | 1_3:+68361254 | Msa0136480:CDS |
| CATAGTGCAACCAAGTGTAT+TGG | 0.511814 | 1_3:+68358309 | Msa0136480:CDS |
| ATTCCAGATGCGGTTCGGAC+GGG | 0.513072 | 1_3:-68357702 | None:intergenic |
| GACCAGAGAAGCTGGAATCC+AGG | 0.513139 | 1_3:+68360287 | Msa0136480:CDS |
| TGAAACCGGCATCTTTAGCC+AGG | 0.513631 | 1_3:-68359402 | None:intergenic |
| CGGCTATTCCAGATGCGGTT+CGG | 0.514134 | 1_3:-68357707 | None:intergenic |
| GATGTTCGGACCAGAGAAGC+TGG | 0.521187 | 1_3:+68360279 | Msa0136480:CDS |
| CTGCGACAAATGCTTTCTTA+CGG | 0.521566 | 1_3:+68359280 | Msa0136480:CDS |
| CTAAAACAATTGAACTGTTG+AGG | 0.521704 | 1_3:-68357376 | None:intergenic |
| CACGTGCTTCTTCTTCACTA+AGG | 0.522717 | 1_3:-68357488 | None:intergenic |
| CGTGATTATATGGCAAATGA+AGG | 0.524748 | 1_3:+68360475 | Msa0136480:CDS |
| GGAGTTAGCATTAGCTCGAA+TGG | 0.524838 | 1_3:+68360233 | Msa0136480:CDS |
| AATTGTCATGCCAATACACT+TGG | 0.525376 | 1_3:-68358319 | None:intergenic |
| CGCCTCTTCTACATTGGCAG+AGG | 0.532370 | 1_3:-68358271 | None:intergenic |
| TGCCCTCACATTGCCACCAC+CGG | 0.535961 | 1_3:+68357759 | Msa0136480:CDS |
| AATTGGGATATGAGCTTGAA+GGG | 0.539350 | 1_3:+68361297 | Msa0136480:CDS |
| CGTCACCGCCTCTTCTACAT+TGG | 0.539713 | 1_3:-68358277 | None:intergenic |
| TGGTACACTTCTTATGGAGG+AGG | 0.541142 | 1_3:+68361193 | Msa0136480:CDS |
| AGTACTAGCTTACAGAGAAT+GGG | 0.541451 | 1_3:-68361488 | None:intergenic |
| AAAGGAGGCTTTGAAGGCCA+CGG | 0.542814 | 1_3:+68357465 | Msa0136480:CDS |
| ATTAGCTCGAATGGAAGACT+TGG | 0.543470 | 1_3:+68360242 | Msa0136480:CDS |
| GGAGAAACTGAATCAGTGAT+GGG | 0.543828 | 1_3:-68356993 | None:intergenic |
| GTCATATGAAGATACACGGC+AGG | 0.543921 | 1_3:+68360513 | Msa0136480:CDS |
| AACTTTCATGTCCCTTCCGG+CGG | 0.546193 | 1_3:+68358197 | Msa0136480:CDS |
| GAACTGCTGTACCGGTTCAT+GGG | 0.546285 | 1_3:+68360885 | Msa0136480:CDS |
| ATGAGCTCTGGAAAACTGGC+AGG | 0.546949 | 1_3:+68359943 | Msa0136480:CDS |
| AAATATGAATGCCTTATGAT+GGG | 0.547238 | 1_3:-68361443 | None:intergenic |
| GAACACTTACCCATAAGCTC+TGG | 0.547667 | 1_3:-68360836 | None:intergenic |
| AAGCCTCCTTTCCCAGGACG+TGG | 0.547795 | 1_3:-68357453 | None:intergenic |
| ATGATGTCCACAAGTTGCTC+AGG | 0.548538 | 1_3:-68360105 | None:intergenic |
| GGGAGAAACTGAATCAGTGA+TGG | 0.549026 | 1_3:-68356994 | None:intergenic |
| TCGTGTTTATAGAGTTCAGC+GGG | 0.550160 | 1_3:+68360161 | Msa0136480:CDS |
| GAAGAGTGAGCGATAGTGTG+AGG | 0.552750 | 1_3:-68356970 | None:intergenic |
| AAGCCCATCTGCTCTAAACA+AGG | 0.553799 | 1_3:-68359880 | None:intergenic |
| TGACCTCTGGGGTTGAGAAA+GGG | 0.554088 | 1_3:+68360202 | Msa0136480:CDS |
| CTGCTGTACCGGTTCATGGG+CGG | 0.556681 | 1_3:+68360888 | Msa0136480:CDS |
| ACTCTATAAACACGAGTCCA+TGG | 0.559334 | 1_3:-68360153 | None:intergenic |
| GCTCTGGACAAGTAGTGTTA+CGG | 0.560794 | 1_3:-68360820 | None:intergenic |
| AAGTCACCACGTCCTGGGAA+AGG | 0.561658 | 1_3:+68357447 | Msa0136480:CDS |
| CACGTGAGAGGCCATACTTA+CGG | 0.562539 | 1_3:-68357602 | None:intergenic |
| ATGGTCGACTTATCTCATAA+AGG | 0.565397 | 1_3:+68357540 | Msa0136480:CDS |
| CTTCTTCTTCACTAAGGCCG+TGG | 0.565667 | 1_3:-68357482 | None:intergenic |
| AAATTGGGATATGAGCTTGA+AGG | 0.569511 | 1_3:+68361296 | Msa0136480:CDS |
| GACAAACTTGCATAACCATA+CGG | 0.570245 | 1_3:-68361601 | None:intergenic |
| ATCGAGAATGGCAACTGCAA+TGG | 0.572062 | 1_3:+68357410 | Msa0136480:exon |
| AACCCTTATGTGCAGACAAG+AGG | 0.578250 | 1_3:+68358005 | Msa0136480:CDS |
| ATGTCCACAAGTTGCTCAGG+TGG | 0.579117 | 1_3:-68360102 | None:intergenic |
| TCCTTGCAATGGTACCTCCA+TGG | 0.580002 | 1_3:+68360136 | Msa0136480:CDS |
| GGGGTGCAGTCGTACCAGAG+AGG | 0.580051 | 1_3:-68356913 | None:intergenic |
| GGAGAAACTTACAGTAGCAG+AGG | 0.580634 | 1_3:-68357015 | None:intergenic |
| TTAGCTCGAATGGAAGACTT+GGG | 0.582791 | 1_3:+68360243 | Msa0136480:CDS |
| CCAGATTAAACCAGAAGAGG+TGG | 0.582970 | 1_3:+68360441 | Msa0136480:CDS |
| CGTAAGAAAGCATTTGTCGC+AGG | 0.582996 | 1_3:-68359279 | None:intergenic |
| ACACTTGGTTGCACTATGCT+CGG | 0.583303 | 1_3:-68358304 | None:intergenic |
| GGTGCAGTCGTACCAGAGAG+GGG | 0.583926 | 1_3:-68356911 | None:intergenic |
| TTATCCACCTGAGCAACTTG+TGG | 0.584183 | 1_3:+68360098 | Msa0136480:CDS |
| CACCTCTGCCAATGTAGAAG+AGG | 0.586680 | 1_3:+68358269 | Msa0136480:CDS |
| CGAATTGCACGCATACTGGT+AGG | 0.587485 | 1_3:-68357858 | None:intergenic |
| GTTGAGTTTATATTAATGGG+TGG | 0.587623 | 1_3:+68358174 | Msa0136480:CDS |
| GTCCCTTGTTTAGAGCAGAT+GGG | 0.588499 | 1_3:+68359877 | Msa0136480:CDS |
| GTTGCTCGTGACACTAATAG+AGG | 0.589637 | 1_3:+68359346 | Msa0136480:CDS |
| TGCAGAGATTGTAAACTCCA+TGG | 0.589639 | 1_3:+68357521 | Msa0136480:CDS |
| GTGAGCGATAGTGTGAGGAA+GGG | 0.589683 | 1_3:-68356965 | None:intergenic |
| TTCTGACAAGCTACAACACC+AGG | 0.589825 | 1_3:+68360913 | Msa0136480:CDS |
| CAAGTTTGGGTGCACGTGAG+AGG | 0.590702 | 1_3:-68357614 | None:intergenic |
| GGAGTTTACAATCTCTGCAA+TGG | 0.592885 | 1_3:-68357517 | None:intergenic |
| ATGCCTGATCTTCCAAATGT+TGG | 0.593013 | 1_3:+68359813 | Msa0136480:CDS |
| ACACATGCTACAAAATTACA+TGG | 0.595514 | 1_3:-68361399 | None:intergenic |
| TACCCCACTCTTGTAATACG+TGG | 0.597220 | 1_3:+68359909 | Msa0136480:CDS |
| GTGTATACAACAGCGAATGT+AGG | 0.603146 | 1_3:-68361571 | None:intergenic |
| AAGTAATCACGGTAATCCGC+CGG | 0.605266 | 1_3:-68358213 | None:intergenic |
| TCACCAGATTAAACCAGAAG+AGG | 0.607594 | 1_3:+68360438 | Msa0136480:CDS |
| GAAAGCATTTGTCGCAGGTG+AGG | 0.608219 | 1_3:-68359274 | None:intergenic |
| GTTCCACGTATTACAAGAGT+GGG | 0.609518 | 1_3:-68359912 | None:intergenic |
| GAGAATGGCAACTGCAATGG+TGG | 0.611617 | 1_3:+68357413 | Msa0136480:exon |
| CTCTGCCAATGTAGAAGAGG+CGG | 0.613175 | 1_3:+68358272 | Msa0136480:CDS |
| TCACCACGTCCTGGGAAAGG+AGG | 0.613203 | 1_3:+68357450 | Msa0136480:CDS |
| TCCATGGAGGTACCATTGCA+AGG | 0.615787 | 1_3:-68360137 | None:intergenic |
| TTGTTACGGCTGCGAAAATG+TGG | 0.617345 | 1_3:+68360797 | Msa0136480:CDS |
| AGTTCCACGTATTACAAGAG+TGG | 0.617723 | 1_3:-68359913 | None:intergenic |
| GATTCCTTATAAAGTAATCA+CGG | 0.618997 | 1_3:-68358224 | None:intergenic |
| ATCACGGTAATCCGCCGGAA+GGG | 0.620461 | 1_3:-68358208 | None:intergenic |
| TTTAGGTCACAGTGTAGACA+AGG | 0.621502 | 1_3:+68358049 | Msa0136480:CDS |
| TACAGTACTCAGTCTTACAC+TGG | 0.624637 | 1_3:+68357828 | Msa0136480:CDS |
| TTACCGGTGGTGGCAATGTG+AGG | 0.625457 | 1_3:-68357762 | None:intergenic |
| TTATGGTACACTTCTTATGG+AGG | 0.625503 | 1_3:+68361190 | Msa0136480:CDS |
| GTATACACGAGCTGACCGTA+TGG | 0.627033 | 1_3:+68361586 | Msa0136480:three_prime_UTR |
| AATCACGGTAATCCGCCGGA+AGG | 0.629594 | 1_3:-68358209 | None:intergenic |
| CTTTGACATGACAGCAACAA+CGG | 0.631924 | 1_3:-68357727 | None:intergenic |
| GTACAGCAGTTCCATAAACA+TGG | 0.632941 | 1_3:-68360874 | None:intergenic |
| AATGCCTTTGGTGACCTCTG+GGG | 0.633442 | 1_3:+68360191 | Msa0136480:CDS |
| CTTATGTGCAGACAAGAGGT+AGG | 0.635365 | 1_3:+68358009 | Msa0136480:CDS |
| TAAGATAGCTGTAATTTCTG+GGG | 0.637498 | 1_3:+68361250 | Msa0136480:CDS |
| TTTACCAGACTCCGAACGAG+AGG | 0.637913 | 1_3:+68357653 | Msa0136480:CDS |
| GAGAAACTTACAGTAGCAGA+GGG | 0.642848 | 1_3:-68357014 | None:intergenic |
| GCGATAGTGTGAGGAAGGGA+CGG | 0.648261 | 1_3:-68356961 | None:intergenic |
| GTGCAGTCGTACCAGAGAGG+GGG | 0.648309 | 1_3:-68356910 | None:intergenic |
| AGCCCATCTGCTCTAAACAA+GGG | 0.651856 | 1_3:-68359879 | None:intergenic |
| ATTTGTGTCTACTGCCCTGG+CGG | 0.653081 | 1_3:+68357786 | Msa0136480:CDS |
| AATCGGAGTCAGGACCGCCA+GGG | 0.654250 | 1_3:-68357800 | None:intergenic |
| CATAGCAAGGATCCTTGCAA+TGG | 0.656475 | 1_3:+68360125 | Msa0136480:CDS |
| GTATGCGTGCAATTCGAGCA+AGG | 0.657253 | 1_3:+68357865 | Msa0136480:CDS |
| AACTTGTGGACATCATAGCA+AGG | 0.660784 | 1_3:+68360112 | Msa0136480:CDS |
| TGTTGGTGTTGAAAGGGACA+TGG | 0.661690 | 1_3:+68359830 | Msa0136480:CDS |
| GAGAAACTGAATCAGTGATG+GGG | 0.667376 | 1_3:-68356992 | None:intergenic |
| TCAACCCCAGAGGTCACCAA+AGG | 0.669888 | 1_3:-68360195 | None:intergenic |
| TTTATGAGATAAGTCGACCA+TGG | 0.671183 | 1_3:-68357538 | None:intergenic |
| TTCTTATGGAGGAGGCTGAG+CGG | 0.672319 | 1_3:+68361201 | Msa0136480:CDS |
| CTCGTGTTTATAGAGTTCAG+CGG | 0.673150 | 1_3:+68360160 | Msa0136480:CDS |
| TGGAGTCCAAAGCACTTACG+AGG | 0.676860 | 1_3:+68359321 | Msa0136480:CDS |
| GCAATGTGAGGGCAACGATG+AGG | 0.677142 | 1_3:-68357750 | None:intergenic |
| AACAACGGCTATTCCAGATG+CGG | 0.680136 | 1_3:-68357712 | None:intergenic |
| ACTAGCTTACAGAGAATGGG+AGG | 0.681451 | 1_3:-68361485 | None:intergenic |
| GGTTGAGAAAGGGAATCTAA+GGG | 0.683574 | 1_3:+68360212 | Msa0136480:CDS |
| TACCGGTGGTGGCAATGTGA+GGG | 0.686745 | 1_3:-68357761 | None:intergenic |
| ATTCCCTTTCTCAACCCCAG+AGG | 0.690536 | 1_3:-68360205 | None:intergenic |
| GTAGACACAAATGTTACCGG+TGG | 0.711036 | 1_3:-68357775 | None:intergenic |
| GCAGCCGTAACAAACCAACA+AGG | 0.750250 | 1_3:-68360787 | None:intergenic |
| TTCCACGTATTACAAGAGTG+GGG | 0.762155 | 1_3:-68359911 | None:intergenic |
| CTATAAACACGAGTCCATGG+AGG | 0.762944 | 1_3:-68360150 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTTTTTAAAAAAAAC+TGG | - | chr1_3:68358596-68358615 | None:intergenic | 10.0% |
| !!! | TATGTTTTTTTTTTTTTCTT+TGG | + | chr1_3:68359763-68359782 | Msa0136480:intron | 10.0% |
| !! | TATCATGTAGTTATATTAAT+GGG | + | chr1_3:68358131-68358150 | Msa0136480:intron | 15.0% |
| !!! | CACAAAATCTATTTTTTTTA+AGG | - | chr1_3:68358489-68358508 | None:intergenic | 15.0% |
| !!! | AAAAAAAACTGGATTTTTAT+GGG | - | chr1_3:68358585-68358604 | None:intergenic | 15.0% |
| !!! | TAAAAAAAACTGGATTTTTA+TGG | - | chr1_3:68358586-68358605 | None:intergenic | 15.0% |
| !!! | TCTATTTTTTTTCAAAAACA+AGG | - | chr1_3:68358649-68358668 | None:intergenic | 15.0% |
| !!! | TTTGTTTACTAGTATTATTT+TGG | + | chr1_3:68360375-68360394 | Msa0136480:intron | 15.0% |
| !!! | TTACTGATTATTATTACATT+AGG | - | chr1_3:68361340-68361359 | None:intergenic | 15.0% |
| !!! | TCAGTAATAGTTTTTTTTTA+AGG | + | chr1_3:68361353-68361372 | Msa0136480:three_prime_UTR | 15.0% |
| !!! | CAGTAATAGTTTTTTTTTAA+GGG | + | chr1_3:68361354-68361373 | Msa0136480:three_prime_UTR | 15.0% |
| !!! | ATGTGTTCTATTTTACTTAA+AGG | - | chr1_3:68357948-68357967 | None:intergenic | 20.0% |
| !! | GTATCATGTAGTTATATTAA+TGG | + | chr1_3:68358130-68358149 | Msa0136480:intron | 20.0% |
| !! | TCAACTTGCAAATAATTAAA+TGG | - | chr1_3:68358362-68358381 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCAAAAACAAGG+AGG | - | chr1_3:68358646-68358665 | None:intergenic | 20.0% |
| !!! | TGAAAAAAATCTGAAACAAA+CGG | + | chr1_3:68358789-68358808 | Msa0136480:intron | 20.0% |
| !! | ATTAATAAGCAACTTTCTAT+AGG | + | chr1_3:68359632-68359651 | Msa0136480:intron | 20.0% |
| !!! | TTGTTTGTTAACATCATTTT+AGG | + | chr1_3:68360067-68360086 | Msa0136480:intron | 20.0% |
| !! | TAGGTTAATCTATTAAAGTT+CGG | - | chr1_3:68361555-68361574 | None:intergenic | 20.0% |
| ! | AAAGTAAAATCAGTAAGAGA+CGG | - | chr1_3:68357075-68357094 | None:intergenic | 25.0% |
| !!! | TCAGGTTGAGTTTATATTAA+TGG | + | chr1_3:68358170-68358189 | Msa0136480:intron | 25.0% |
| !! | CAGGTTGAGTTTATATTAAT+GGG | + | chr1_3:68358171-68358190 | Msa0136480:intron | 25.0% |
| ! | ATTACCGTGATTACTTTATA+AGG | + | chr1_3:68358220-68358239 | Msa0136480:CDS | 25.0% |
| ! | GATTCCTTATAAAGTAATCA+CGG | - | chr1_3:68358227-68358246 | None:intergenic | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr1_3:68358685-68358704 | Msa0136480:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr1_3:68358686-68358705 | Msa0136480:intron | 25.0% |
| !! | GAAAAAAATCTGAAACAAAC+GGG | + | chr1_3:68358790-68358809 | Msa0136480:intron | 25.0% |
| !! | AAAAAAATCTGAAACAAACG+GGG | + | chr1_3:68358791-68358810 | Msa0136480:intron | 25.0% |
| ! | AACTAAACCAGTTTATATCA+TGG | - | chr1_3:68359085-68359104 | None:intergenic | 25.0% |
| !! | TGGTTTAGTTATGATTTTCT+AGG | + | chr1_3:68359095-68359114 | Msa0136480:intron | 25.0% |
| !! | GGTTTAGTTATGATTTTCTA+GGG | + | chr1_3:68359096-68359115 | Msa0136480:intron | 25.0% |
| ! | CATATCAATGATTATATTCG+TGG | + | chr1_3:68359141-68359160 | Msa0136480:intron | 25.0% |
| ! | TGTGTTACATTAACTATTAC+CGG | - | chr1_3:68359188-68359207 | None:intergenic | 25.0% |
| !! | TTTTAAACACATTCAGCATA+AGG | - | chr1_3:68359497-68359516 | None:intergenic | 25.0% |
| ! | TCATTATATTTGTCTAGACA+AGG | + | chr1_3:68359579-68359598 | Msa0136480:intron | 25.0% |
| !!! | CAAGCTTTAAATAGATTCAT+TGG | + | chr1_3:68359603-68359622 | Msa0136480:intron | 25.0% |
| !!! | CATATTACTTTCTAGTTGTT+TGG | + | chr1_3:68359655-68359674 | Msa0136480:intron | 25.0% |
| ! | GAATAATGAGATAGAAACTA+AGG | - | chr1_3:68360016-68360035 | None:intergenic | 25.0% |
| ! | TTTCTATCTCATTATTCATC+AGG | + | chr1_3:68360019-68360038 | Msa0136480:intron | 25.0% |
| ! | CATTATTCATCAGGTTTAAA+AGG | + | chr1_3:68360028-68360047 | Msa0136480:intron | 25.0% |
| ! | ATTAAATTTCAAGACGAGAT+TGG | - | chr1_3:68360326-68360345 | None:intergenic | 25.0% |
| !! | TTTTGTCATATGAAGATACA+CGG | + | chr1_3:68360509-68360528 | Msa0136480:CDS | 25.0% |
| ! | AGAAAATGATGATAGACAAA+AGG | - | chr1_3:68360581-68360600 | None:intergenic | 25.0% |
| !!! | CCTTCTTTATTTTGAATGAA+GGG | + | chr1_3:68360665-68360684 | Msa0136480:intron | 25.0% |
| !!! | CTTCTTTATTTTGAATGAAG+GGG | + | chr1_3:68360666-68360685 | Msa0136480:intron | 25.0% |
| ! | CAACAACAAATTTACACTAA+AGG | - | chr1_3:68360713-68360732 | None:intergenic | 25.0% |
| ! | GAATATTCACATGTTCTTAT+TGG | + | chr1_3:68360980-68360999 | Msa0136480:intron | 25.0% |
| ! | ATCTTCTTGGATATTATACA+TGG | - | chr1_3:68361064-68361083 | None:intergenic | 25.0% |
| ! | AATATCCAAGAAGATACATA+TGG | + | chr1_3:68361069-68361088 | Msa0136480:intron | 25.0% |
| ! | AATATCCATATGTATCTTCT+TGG | - | chr1_3:68361077-68361096 | None:intergenic | 25.0% |
| !!! | TAACAATAATTTTGGTCAGT+AGG | - | chr1_3:68361164-68361183 | None:intergenic | 25.0% |
| ! | TGACCAAAATTATTGTTAAC+AGG | + | chr1_3:68361166-68361185 | Msa0136480:intron | 25.0% |
| ! | GACCAAAATTATTGTTAACA+GGG | + | chr1_3:68361167-68361186 | Msa0136480:intron | 25.0% |
| !! | AACCCTGTTAACAATAATTT+TGG | - | chr1_3:68361172-68361191 | None:intergenic | 25.0% |
| ! | AATTATTGTTAACAGGGTTA+TGG | + | chr1_3:68361173-68361192 | Msa0136480:intron | 25.0% |
| ! | ATTAGGTATTTCATCATGTA+AGG | - | chr1_3:68361323-68361342 | None:intergenic | 25.0% |
| !!! | TATTTTAAATGCCCATCATA+AGG | + | chr1_3:68361432-68361451 | Msa0136480:three_prime_UTR | 25.0% |
| ! | AAATATGAATGCCTTATGAT+GGG | - | chr1_3:68361446-68361465 | None:intergenic | 25.0% |
| ! | AAAATATGAATGCCTTATGA+TGG | - | chr1_3:68361447-68361466 | None:intergenic | 25.0% |
| TTGTGAGTAATAGTAAAGAG+AGG | + | chr1_3:68357204-68357223 | Msa0136480:intron | 30.0% | |
| GATCTATTTACCTCATAAGA+TGG | + | chr1_3:68357258-68357277 | Msa0136480:intron | 30.0% | |
| CTAAAACAATTGAACTGTTG+AGG | - | chr1_3:68357379-68357398 | None:intergenic | 30.0% | |
| !!! | AGTTCAATTGTTTTAGTGCT+TGG | + | chr1_3:68357383-68357402 | Msa0136480:five_prime_UTR | 30.0% |
| ! | CTGAGTACTGTATTCAAAAT+CGG | - | chr1_3:68357820-68357839 | None:intergenic | 30.0% |
| ! | ACTTTGTTTGCTTTGGATTT+AGG | + | chr1_3:68357979-68357998 | Msa0136480:intron | 30.0% |
| ! | TGTAGTTATATTAATGGGTG+TGG | + | chr1_3:68358136-68358155 | Msa0136480:intron | 30.0% |
| GTTGAGTTTATATTAATGGG+TGG | + | chr1_3:68358174-68358193 | Msa0136480:CDS | 30.0% | |
| CTTGCAAATAATTAAATGGC+AGG | - | chr1_3:68358358-68358377 | None:intergenic | 30.0% | |
| !!! | CTTTTGCGTAAAGTTTTGAA+TGG | + | chr1_3:68358391-68358410 | Msa0136480:intron | 30.0% |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr1_3:68358689-68358708 | None:intergenic | 30.0% | |
| !! | TATAGGGAGAATGGATTATA+TGG | + | chr1_3:68358823-68358842 | Msa0136480:intron | 30.0% |
| ACCAAGAAAAACTACAAATC+AGG | + | chr1_3:68358877-68358896 | Msa0136480:intron | 30.0% | |
| TACAAATCAGGCTATTAAGA+TGG | + | chr1_3:68358889-68358908 | Msa0136480:intron | 30.0% | |
| TAAACCAGTTTATATCATGG+CGG | - | chr1_3:68359082-68359101 | None:intergenic | 30.0% | |
| ACCTTTGAGTAAACTTTAAC+CGG | + | chr1_3:68359166-68359185 | Msa0136480:intron | 30.0% | |
| TTGCACTTCTTAAATTTCTC+AGG | + | chr1_3:68359230-68359249 | Msa0136480:intron | 30.0% | |
| ATATAGGAGAATAGTTTGAC+AGG | - | chr1_3:68359471-68359490 | None:intergenic | 30.0% | |
| ! | ATTTGAAAGGGGTACAATTA+GGG | - | chr1_3:68359685-68359704 | None:intergenic | 30.0% |
| ! | TATTTGAAAGGGGTACAATT+AGG | - | chr1_3:68359686-68359705 | None:intergenic | 30.0% |
| ! | TGCCTAGTTTGTATTTGAAA+GGG | - | chr1_3:68359697-68359716 | None:intergenic | 30.0% |
| !!! | TTTTCTTTGGCTTTTGCTTT+AGG | + | chr1_3:68359776-68359795 | Msa0136480:intron | 30.0% |
| AAGAACACATCACATTAGAT+AGG | - | chr1_3:68359971-68359990 | None:intergenic | 30.0% | |
| !! | ATTGGTTCTAGATAATTACC+TGG | - | chr1_3:68360308-68360327 | None:intergenic | 30.0% |
| AAGAAATACAGAATGTCTGT+TGG | - | chr1_3:68360405-68360424 | None:intergenic | 30.0% | |
| GACATTCTGTATTTCTTTGT+AGG | + | chr1_3:68360408-68360427 | Msa0136480:intron | 30.0% | |
| ATTATATGGCAAATGAAGGT+TGG | + | chr1_3:68360479-68360498 | Msa0136480:CDS | 30.0% | |
| TTATATGGCAAATGAAGGTT+GGG | + | chr1_3:68360480-68360499 | Msa0136480:CDS | 30.0% | |
| ATGATGATAGACAAAAGGAT+AGG | - | chr1_3:68360576-68360595 | None:intergenic | 30.0% | |
| !!! | GCCTTCTTTATTTTGAATGA+AGG | + | chr1_3:68360664-68360683 | Msa0136480:intron | 30.0% |
| CCCTTCATTCAAAATAAAGA+AGG | - | chr1_3:68360668-68360687 | None:intergenic | 30.0% | |
| TTTACACTAAAGGTAAGAAC+AGG | - | chr1_3:68360703-68360722 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTTGATGAAACA+TGG | + | chr1_3:68360724-68360743 | Msa0136480:intron | 30.0% |
| !! | ATATCCTTGTTGGTTTGTTA+CGG | + | chr1_3:68360783-68360802 | Msa0136480:CDS | 30.0% |
| TACAATGAGGAACATGTTAT+TGG | - | chr1_3:68361131-68361150 | None:intergenic | 30.0% | |
| ACTAAGATAGCTGTAATTTC+TGG | + | chr1_3:68361248-68361267 | Msa0136480:CDS | 30.0% | |
| CTAAGATAGCTGTAATTTCT+GGG | + | chr1_3:68361249-68361268 | Msa0136480:CDS | 30.0% | |
| TAAGATAGCTGTAATTTCTG+GGG | + | chr1_3:68361250-68361269 | Msa0136480:CDS | 30.0% | |
| ! | ATCCCAATTTTCTGTAGTAA+TGG | - | chr1_3:68361286-68361305 | None:intergenic | 30.0% |
| ACACATGCTACAAAATTACA+TGG | - | chr1_3:68361402-68361421 | None:intergenic | 30.0% | |
| ! | TGTAATTTTGTAGCATGTGT+TGG | + | chr1_3:68361402-68361421 | Msa0136480:three_prime_UTR | 30.0% |
| !! | GCATTCATATTTTTGCTCAA+AGG | + | chr1_3:68361454-68361473 | Msa0136480:three_prime_UTR | 30.0% |
| AGTACTGCAAATTAAGATAC+TGG | + | chr1_3:68361505-68361524 | Msa0136480:three_prime_UTR | 30.0% | |
| !!! | TGCTTTCAGTTTTAGGGTTT+GGG | - | chr1_3:68356941-68356960 | None:intergenic | 35.0% |
| TCGAAACAGTGATGAAAGAT+GGG | - | chr1_3:68357039-68357058 | None:intergenic | 35.0% | |
| GATCATCTAACCATCTTATG+AGG | - | chr1_3:68357271-68357290 | None:intergenic | 35.0% | |
| !! | AATCTTTCCGTTTTTGCTGT+AGG | + | chr1_3:68357302-68357321 | Msa0136480:intron | 35.0% |
| !! | ATCTTTCCGTTTTTGCTGTA+GGG | + | chr1_3:68357303-68357322 | Msa0136480:intron | 35.0% |
| ACAATTCCCTACAGCAAAAA+CGG | - | chr1_3:68357312-68357331 | None:intergenic | 35.0% | |
| TTTATGAGATAAGTCGACCA+TGG | - | chr1_3:68357541-68357560 | None:intergenic | 35.0% | |
| ! | ATGGTCGACTTATCTCATAA+AGG | + | chr1_3:68357540-68357559 | Msa0136480:CDS | 35.0% |
| GCAATCATCTCAACAAGTTT+GGG | - | chr1_3:68357630-68357649 | None:intergenic | 35.0% | |
| TGCAATCATCTCAACAAGTT+TGG | - | chr1_3:68357631-68357650 | None:intergenic | 35.0% | |
| ! | TTCGATGACTTTGTTTGCTT+TGG | + | chr1_3:68357972-68357991 | Msa0136480:intron | 35.0% |
| ATTGATCAGCTTAAGCGTTT+AGG | + | chr1_3:68358032-68358051 | Msa0136480:CDS | 35.0% | |
| !! | GGTGTGGTTTATTGTTTTTC+AGG | + | chr1_3:68358152-68358171 | Msa0136480:intron | 35.0% |
| AATCTTCATGATGCTTTGTC+TGG | + | chr1_3:68358243-68358262 | Msa0136480:CDS | 35.0% | |
| AATTGTCATGCCAATACACT+TGG | - | chr1_3:68358322-68358341 | None:intergenic | 35.0% | |
| !!! | TTGCGTAAAGTTTTGAATGG+AGG | + | chr1_3:68358394-68358413 | Msa0136480:intron | 35.0% |
| ! | ACTGGATTTTTATGGGTAGT+AGG | - | chr1_3:68358578-68358597 | None:intergenic | 35.0% |
| CCATTCTCCCTATAAGATTT+AGG | - | chr1_3:68358817-68358836 | None:intergenic | 35.0% | |
| CCTAAATCTTATAGGGAGAA+TGG | + | chr1_3:68358814-68358833 | Msa0136480:intron | 35.0% | |
| !! | GCCTGATTTGTAGTTTTTCT+TGG | - | chr1_3:68358881-68358900 | None:intergenic | 35.0% |
| !! | CAGGCTATTAAGATGGATTT+TGG | + | chr1_3:68358896-68358915 | Msa0136480:intron | 35.0% |
| TGATTCACAAGAAGACATTG+CGG | + | chr1_3:68358942-68358961 | Msa0136480:intron | 35.0% | |
| ACCGGTTAAAGTTTACTCAA+AGG | - | chr1_3:68359170-68359189 | None:intergenic | 35.0% | |
| GAAGTGCAAAACTTGATAAG+CGG | - | chr1_3:68359219-68359238 | None:intergenic | 35.0% | |
| CACTTCTTAAATTTCTCAGG+AGG | + | chr1_3:68359233-68359252 | Msa0136480:intron | 35.0% | |
| ACAGTAACAAACCTTGAAAC+CGG | - | chr1_3:68359419-68359438 | None:intergenic | 35.0% | |
| ! | ATTCAGCATAAGGAGCATAT+AGG | - | chr1_3:68359487-68359506 | None:intergenic | 35.0% |
| TTCATTACAACTTTGAGTGC+AGG | - | chr1_3:68359537-68359556 | None:intergenic | 35.0% | |
| ACCCCTTTCAAATACAAACT+AGG | + | chr1_3:68359692-68359711 | Msa0136480:intron | 35.0% | |
| ! | GCCTAGTTTGTATTTGAAAG+GGG | - | chr1_3:68359696-68359715 | None:intergenic | 35.0% |
| ! | CTGCCTAGTTTGTATTTGAA+AGG | - | chr1_3:68359698-68359717 | None:intergenic | 35.0% |
| TCAAATACAAACTAGGCAGT+AGG | + | chr1_3:68359699-68359718 | Msa0136480:intron | 35.0% | |
| !! | TTCCAAATGTTGGTGTTGAA+AGG | + | chr1_3:68359823-68359842 | Msa0136480:CDS | 35.0% |
| !! | TCCAAATGTTGGTGTTGAAA+GGG | + | chr1_3:68359824-68359843 | Msa0136480:CDS | 35.0% |
| AGGGACTTTCAAAAAACTCT+CGG | - | chr1_3:68359863-68359882 | None:intergenic | 35.0% | |
| ! | GTTTAAAATGTCGCGATGTT+CGG | + | chr1_3:68360265-68360284 | Msa0136480:CDS | 35.0% |
| ACTTGTTCGTCGTGATTATA+TGG | + | chr1_3:68360465-68360484 | Msa0136480:CDS | 35.0% | |
| CGTGATTATATGGCAAATGA+AGG | + | chr1_3:68360475-68360494 | Msa0136480:CDS | 35.0% | |
| ! | ATTAGCATGACAGTTTTACC+TGG | - | chr1_3:68360934-68360953 | None:intergenic | 35.0% |
| ! | TGAGTGTAATTGCTGAGTTT+TGG | + | chr1_3:68361011-68361030 | Msa0136480:intron | 35.0% |
| GAACATGTTATTGGTATCCT+TGG | - | chr1_3:68361122-68361141 | None:intergenic | 35.0% | |
| !! | ATTTTGGTCAGTAGGTCAAT+TGG | - | chr1_3:68361156-68361175 | None:intergenic | 35.0% |
| TTATGGTACACTTCTTATGG+AGG | + | chr1_3:68361190-68361209 | Msa0136480:CDS | 35.0% | |
| ACGCCATTACTACAGAAAAT+TGG | + | chr1_3:68361280-68361299 | Msa0136480:CDS | 35.0% | |
| CGCCATTACTACAGAAAATT+GGG | + | chr1_3:68361281-68361300 | Msa0136480:CDS | 35.0% | |
| AAATTGGGATATGAGCTTGA+AGG | + | chr1_3:68361296-68361315 | Msa0136480:CDS | 35.0% | |
| AATTGGGATATGAGCTTGAA+GGG | + | chr1_3:68361297-68361316 | Msa0136480:CDS | 35.0% | |
| ! | AGTACTAGCTTACAGAGAAT+GGG | - | chr1_3:68361491-68361510 | None:intergenic | 35.0% |
| GACAAACTTGCATAACCATA+CGG | - | chr1_3:68361604-68361623 | None:intergenic | 35.0% | |
| CAAGTTGCAACAATGCTATA+TGG | - | chr1_3:68361626-68361645 | None:intergenic | 35.0% | |
| !!! | TCAGTTTTAGGGTTTGGGTT+GGG | - | chr1_3:68356936-68356955 | None:intergenic | 40.0% |
| !!! | TTCAGTTTTAGGGTTTGGGT+TGG | - | chr1_3:68356937-68356956 | None:intergenic | 40.0% |
| !!! | GTGCTTTCAGTTTTAGGGTT+TGG | - | chr1_3:68356942-68356961 | None:intergenic | 40.0% |
| GAGAAACTGAATCAGTGATG+GGG | - | chr1_3:68356995-68357014 | None:intergenic | 40.0% | |
| GGAGAAACTGAATCAGTGAT+GGG | - | chr1_3:68356996-68357015 | None:intergenic | 40.0% | |
| GAGAAACTTACAGTAGCAGA+GGG | - | chr1_3:68357017-68357036 | None:intergenic | 40.0% | |
| CTCGAAACAGTGATGAAAGA+TGG | - | chr1_3:68357040-68357059 | None:intergenic | 40.0% | |
| GGAGTTTACAATCTCTGCAA+TGG | - | chr1_3:68357520-68357539 | None:intergenic | 40.0% | |
| TGCAGAGATTGTAAACTCCA+TGG | + | chr1_3:68357521-68357540 | Msa0136480:CDS | 40.0% | |
| !! | GAGCATTGAGATCAACTTTG+TGG | - | chr1_3:68357566-68357585 | None:intergenic | 40.0% |
| CTTTGACATGACAGCAACAA+CGG | - | chr1_3:68357730-68357749 | None:intergenic | 40.0% | |
| GCAGTAGACACAAATGTTAC+CGG | - | chr1_3:68357781-68357800 | None:intergenic | 40.0% | |
| CTGTATTCAAAATCGGAGTC+AGG | - | chr1_3:68357813-68357832 | None:intergenic | 40.0% | |
| TACAGTACTCAGTCTTACAC+TGG | + | chr1_3:68357828-68357847 | Msa0136480:CDS | 40.0% | |
| TACCTCTTGTCTGCACATAA+GGG | - | chr1_3:68358010-68358029 | None:intergenic | 40.0% | |
| TTTAGGTCACAGTGTAGACA+AGG | + | chr1_3:68358049-68358068 | Msa0136480:CDS | 40.0% | |
| CATAGTGCAACCAAGTGTAT+TGG | + | chr1_3:68358309-68358328 | Msa0136480:CDS | 40.0% | |
| !!! | TTTTGAATGGAGGAGTGCTT+TGG | + | chr1_3:68358404-68358423 | Msa0136480:intron | 40.0% |
| !!! | GCTTTGGACTTTTTGGTGTT+TGG | + | chr1_3:68358420-68358439 | Msa0136480:intron | 40.0% |
| !!! | TTTTTGGTGTTTGGACACGT+GGG | + | chr1_3:68358429-68358448 | Msa0136480:intron | 40.0% |
| AAACGGGGCCTAAATCTTAT+AGG | + | chr1_3:68358806-68358825 | Msa0136480:intron | 40.0% | |
| AACGGGGCCTAAATCTTATA+GGG | + | chr1_3:68358807-68358826 | Msa0136480:intron | 40.0% | |
| !! | AGGGAGAATGGATTATATGG+AGG | + | chr1_3:68358826-68358845 | Msa0136480:intron | 40.0% |
| CTGCGACAAATGCTTTCTTA+CGG | + | chr1_3:68359280-68359299 | Msa0136480:CDS | 40.0% | |
| TTCTTACGGTTGTACACGAT+TGG | + | chr1_3:68359294-68359313 | Msa0136480:CDS | 40.0% | |
| !!! | TGTAGCTGATTGTTTTTGCC+TGG | + | chr1_3:68359384-68359403 | Msa0136480:CDS | 40.0% |
| ATACAAACTAGGCAGTAGGT+TGG | + | chr1_3:68359703-68359722 | Msa0136480:intron | 40.0% | |
| ATGCCTGATCTTCCAAATGT+TGG | + | chr1_3:68359813-68359832 | Msa0136480:CDS | 40.0% | |
| ACACCAACATTTGGAAGATC+AGG | - | chr1_3:68359819-68359838 | None:intergenic | 40.0% | |
| TCCCTTTCAACACCAACATT+TGG | - | chr1_3:68359828-68359847 | None:intergenic | 40.0% | |
| TTCCACGTATTACAAGAGTG+GGG | - | chr1_3:68359914-68359933 | None:intergenic | 40.0% | |
| GTTCCACGTATTACAAGAGT+GGG | - | chr1_3:68359915-68359934 | None:intergenic | 40.0% | |
| AGTTCCACGTATTACAAGAG+TGG | - | chr1_3:68359916-68359935 | None:intergenic | 40.0% | |
| ACTCTTGTAATACGTGGAAC+TGG | + | chr1_3:68359915-68359934 | Msa0136480:CDS | 40.0% | |
| CTCTTGTAATACGTGGAACT+GGG | + | chr1_3:68359916-68359935 | Msa0136480:CDS | 40.0% | |
| !! | CTTTATGAGCTCTGGAAAAC+TGG | + | chr1_3:68359939-68359958 | Msa0136480:CDS | 40.0% |
| ! | CATCAGGTTTAAAAGGCATG+TGG | + | chr1_3:68360035-68360054 | Msa0136480:intron | 40.0% |
| AACTTGTGGACATCATAGCA+AGG | + | chr1_3:68360112-68360131 | Msa0136480:CDS | 40.0% | |
| ACTCTATAAACACGAGTCCA+TGG | - | chr1_3:68360156-68360175 | None:intergenic | 40.0% | |
| CTCGTGTTTATAGAGTTCAG+CGG | + | chr1_3:68360160-68360179 | Msa0136480:CDS | 40.0% | |
| TCGTGTTTATAGAGTTCAGC+GGG | + | chr1_3:68360161-68360180 | Msa0136480:CDS | 40.0% | |
| GGTTGAGAAAGGGAATCTAA+GGG | + | chr1_3:68360212-68360231 | Msa0136480:CDS | 40.0% | |
| ATTAGCTCGAATGGAAGACT+TGG | + | chr1_3:68360242-68360261 | Msa0136480:CDS | 40.0% | |
| TTAGCTCGAATGGAAGACTT+GGG | + | chr1_3:68360243-68360262 | Msa0136480:CDS | 40.0% | |
| TCACCAGATTAAACCAGAAG+AGG | + | chr1_3:68360438-68360457 | Msa0136480:CDS | 40.0% | |
| AGGATAGGCACTAATAAGAG+AGG | - | chr1_3:68360561-68360580 | None:intergenic | 40.0% | |
| GAAGGCAAAATATGCACAAC+AGG | - | chr1_3:68360650-68360669 | None:intergenic | 40.0% | |
| ATGAAACATGGCCATGACAT+TGG | + | chr1_3:68360736-68360755 | Msa0136480:intron | 40.0% | |
| ACTACTTGTCCAGAGCTTAT+GGG | + | chr1_3:68360827-68360846 | Msa0136480:CDS | 40.0% | |
| GTACAGCAGTTCCATAAACA+TGG | - | chr1_3:68360877-68360896 | None:intergenic | 40.0% | |
| TGTTTATGGAACTGCTGTAC+CGG | + | chr1_3:68360877-68360896 | Msa0136480:CDS | 40.0% | |
| ! | ATCACAATGCAGCTTTTCCA+AGG | + | chr1_3:68361102-68361121 | Msa0136480:intron | 40.0% |
| AGGTCAATTGGAGTACAATG+AGG | - | chr1_3:68361144-68361163 | None:intergenic | 40.0% | |
| GGGTTATGGTACACTTCTTA+TGG | + | chr1_3:68361187-68361206 | Msa0136480:intron | 40.0% | |
| !! | ATAGCTGTAATTTCTGGGGT+TGG | + | chr1_3:68361254-68361273 | Msa0136480:CDS | 40.0% |
| TACAGAGAATGGGAGGTAAT+GGG | - | chr1_3:68361481-68361500 | None:intergenic | 40.0% | |
| TTACAGAGAATGGGAGGTAA+TGG | - | chr1_3:68361482-68361501 | None:intergenic | 40.0% | |
| ! | CAGTACTAGCTTACAGAGAA+TGG | - | chr1_3:68361492-68361511 | None:intergenic | 40.0% |
| GTGTATACAACAGCGAATGT+AGG | - | chr1_3:68361574-68361593 | None:intergenic | 40.0% | |
| !!! | CAGTTTTAGGGTTTGGGTTG+GGG | - | chr1_3:68356935-68356954 | None:intergenic | 45.0% |
| ! | GGACGGTGCTTTCAGTTTTA+GGG | - | chr1_3:68356947-68356966 | None:intergenic | 45.0% |
| GGGAGAAACTGAATCAGTGA+TGG | - | chr1_3:68356997-68357016 | None:intergenic | 45.0% | |
| GGAGAAACTTACAGTAGCAG+AGG | - | chr1_3:68357018-68357037 | None:intergenic | 45.0% | |
| GTGCTTGGAGTTATCGAGAA+TGG | + | chr1_3:68357398-68357417 | Msa0136480:exon | 45.0% | |
| ATCGAGAATGGCAACTGCAA+TGG | + | chr1_3:68357410-68357429 | Msa0136480:exon | 45.0% | |
| CAAAAAAGTCACCACGTCCT+GGG | + | chr1_3:68357442-68357461 | Msa0136480:CDS | 45.0% | |
| CACGTGCTTCTTCTTCACTA+AGG | - | chr1_3:68357491-68357510 | None:intergenic | 45.0% | |
| AACAACGGCTATTCCAGATG+CGG | - | chr1_3:68357715-68357734 | None:intergenic | 45.0% | |
| GTAGACACAAATGTTACCGG+TGG | - | chr1_3:68357778-68357797 | None:intergenic | 45.0% | |
| AACATTTGTGTCTACTGCCC+TGG | + | chr1_3:68357783-68357802 | Msa0136480:CDS | 45.0% | |
| AACCCTTATGTGCAGACAAG+AGG | + | chr1_3:68358005-68358024 | Msa0136480:CDS | 45.0% | |
| CTACCTCTTGTCTGCACATA+AGG | - | chr1_3:68358011-68358030 | None:intergenic | 45.0% | |
| CTTATGTGCAGACAAGAGGT+AGG | + | chr1_3:68358009-68358028 | Msa0136480:CDS | 45.0% | |
| GTCACAGTGTAGACAAGGTT+TGG | + | chr1_3:68358054-68358073 | Msa0136480:intron | 45.0% | |
| TGGAACTTTCATGTCCCTTC+CGG | + | chr1_3:68358194-68358213 | Msa0136480:CDS | 45.0% | |
| AAGTAATCACGGTAATCCGC+CGG | - | chr1_3:68358216-68358235 | None:intergenic | 45.0% | |
| ACACTTGGTTGCACTATGCT+CGG | - | chr1_3:68358307-68358326 | None:intergenic | 45.0% | |
| !!! | GAGGAGTGCTTTGGACTTTT+TGG | + | chr1_3:68358413-68358432 | Msa0136480:intron | 45.0% |
| !!! | CTTTTTGGTGTTTGGACACG+TGG | + | chr1_3:68358428-68358447 | Msa0136480:intron | 45.0% |
| !!! | TTTTGGTGTTTGGACACGTG+GGG | + | chr1_3:68358430-68358449 | Msa0136480:intron | 45.0% |
| TGGGGAGAAGACTTGTAGTA+AGG | + | chr1_3:68358448-68358467 | Msa0136480:intron | 45.0% | |
| GGGGAGAAGACTTGTAGTAA+GGG | + | chr1_3:68358449-68358468 | Msa0136480:intron | 45.0% | |
| ACTGCCGCCATGATATAAAC+TGG | + | chr1_3:68359075-68359094 | Msa0136480:intron | 45.0% | |
| AGGAGGCCAGATTATTGTCT+TGG | + | chr1_3:68359250-68359269 | Msa0136480:intron | 45.0% | |
| GGAGGCCAGATTATTGTCTT+GGG | + | chr1_3:68359251-68359270 | Msa0136480:intron | 45.0% | |
| TGAGGCCCAAGACAATAATC+TGG | - | chr1_3:68359259-68359278 | None:intergenic | 45.0% | |
| !! | CGTAAGAAAGCATTTGTCGC+AGG | - | chr1_3:68359282-68359301 | None:intergenic | 45.0% |
| GGTTGTACACGATTGGAGAT+TGG | + | chr1_3:68359301-68359320 | Msa0136480:CDS | 45.0% | |
| CAACATCCTCGTAAGTGCTT+TGG | - | chr1_3:68359330-68359349 | None:intergenic | 45.0% | |
| GTTGCTCGTGACACTAATAG+AGG | + | chr1_3:68359346-68359365 | Msa0136480:CDS | 45.0% | |
| ! | TTTTGCCTGGCTAAAGATGC+CGG | + | chr1_3:68359397-68359416 | Msa0136480:CDS | 45.0% |
| GTGACAACGTGCAGATTGAT+AGG | - | chr1_3:68359442-68359461 | None:intergenic | 45.0% | |
| !! | TGTTGGTGTTGAAAGGGACA+TGG | + | chr1_3:68359830-68359849 | Msa0136480:CDS | 45.0% |
| ! | AGTCCCTTGTTTAGAGCAGA+TGG | + | chr1_3:68359876-68359895 | Msa0136480:CDS | 45.0% |
| ! | GTCCCTTGTTTAGAGCAGAT+GGG | + | chr1_3:68359877-68359896 | Msa0136480:CDS | 45.0% |
| ! | AGCCCATCTGCTCTAAACAA+GGG | - | chr1_3:68359882-68359901 | None:intergenic | 45.0% |
| ! | AAGCCCATCTGCTCTAAACA+AGG | - | chr1_3:68359883-68359902 | None:intergenic | 45.0% |
| TACCCCACTCTTGTAATACG+TGG | + | chr1_3:68359909-68359928 | Msa0136480:CDS | 45.0% | |
| TTATCCACCTGAGCAACTTG+TGG | + | chr1_3:68360098-68360117 | Msa0136480:CDS | 45.0% | |
| ATGATGTCCACAAGTTGCTC+AGG | - | chr1_3:68360108-68360127 | None:intergenic | 45.0% | |
| CATAGCAAGGATCCTTGCAA+TGG | + | chr1_3:68360125-68360144 | Msa0136480:CDS | 45.0% | |
| CTATAAACACGAGTCCATGG+AGG | - | chr1_3:68360153-68360172 | None:intergenic | 45.0% | |
| GGGTTGAGAAAGGGAATCTA+AGG | + | chr1_3:68360211-68360230 | Msa0136480:CDS | 45.0% | |
| GGAGTTAGCATTAGCTCGAA+TGG | + | chr1_3:68360233-68360252 | Msa0136480:CDS | 45.0% | |
| !! | CCACCTCTTCTGGTTTAATC+TGG | - | chr1_3:68360444-68360463 | None:intergenic | 45.0% |
| CCAGATTAAACCAGAAGAGG+TGG | + | chr1_3:68360441-68360460 | Msa0136480:CDS | 45.0% | |
| GTCATATGAAGATACACGGC+AGG | + | chr1_3:68360513-68360532 | Msa0136480:CDS | 45.0% | |
| TAAGAGAGGCTGAGGAAAGA+AGG | - | chr1_3:68360547-68360566 | None:intergenic | 45.0% | |
| ! | GTGTGAGTCTAGTTTGTAGC+TGG | + | chr1_3:68360616-68360635 | Msa0136480:intron | 45.0% |
| AGACAGCACAACCAATGTCA+TGG | - | chr1_3:68360750-68360769 | None:intergenic | 45.0% | |
| CTTGAGCAGGATATCCTTGT+TGG | + | chr1_3:68360773-68360792 | Msa0136480:intron | 45.0% | |
| TTGTTACGGCTGCGAAAATG+TGG | + | chr1_3:68360797-68360816 | Msa0136480:CDS | 45.0% | |
| ! | GCTCTGGACAAGTAGTGTTA+CGG | - | chr1_3:68360823-68360842 | None:intergenic | 45.0% |
| CACTACTTGTCCAGAGCTTA+TGG | + | chr1_3:68360826-68360845 | Msa0136480:CDS | 45.0% | |
| GAACACTTACCCATAAGCTC+TGG | - | chr1_3:68360839-68360858 | None:intergenic | 45.0% | |
| GTTCGTGAGCTCCATGTTTA+TGG | + | chr1_3:68360863-68360882 | Msa0136480:CDS | 45.0% | |
| TTCTGACAAGCTACAACACC+AGG | + | chr1_3:68360913-68360932 | Msa0136480:CDS | 45.0% | |
| TGGTACACTTCTTATGGAGG+AGG | + | chr1_3:68361193-68361212 | Msa0136480:CDS | 45.0% | |
| ! | ACTAGCTTACAGAGAATGGG+AGG | - | chr1_3:68361488-68361507 | None:intergenic | 45.0% |
| ! | GGGACGGTGCTTTCAGTTTT+AGG | - | chr1_3:68356948-68356967 | None:intergenic | 50.0% |
| GTGAGCGATAGTGTGAGGAA+GGG | - | chr1_3:68356968-68356987 | None:intergenic | 50.0% | |
| AGTGAGCGATAGTGTGAGGA+AGG | - | chr1_3:68356969-68356988 | None:intergenic | 50.0% | |
| GAAGAGTGAGCGATAGTGTG+AGG | - | chr1_3:68356973-68356992 | None:intergenic | 50.0% | |
| AACAGCAACTGCTGCAGCAA+TGG | - | chr1_3:68357145-68357164 | None:intergenic | 50.0% | |
| GAGAATGGCAACTGCAATGG+TGG | + | chr1_3:68357413-68357432 | Msa0136480:exon | 50.0% | |
| GCAAAAAAGTCACCACGTCC+TGG | + | chr1_3:68357441-68357460 | Msa0136480:CDS | 50.0% | |
| !! | AAAGGAGGCTTTGAAGGCCA+CGG | + | chr1_3:68357465-68357484 | Msa0136480:CDS | 50.0% |
| CTTCTTCTTCACTAAGGCCG+TGG | - | chr1_3:68357485-68357504 | None:intergenic | 50.0% | |
| CACGTGAGAGGCCATACTTA+CGG | - | chr1_3:68357605-68357624 | None:intergenic | 50.0% | |
| TTTACCAGACTCCGAACGAG+AGG | + | chr1_3:68357653-68357672 | Msa0136480:CDS | 50.0% | |
| GGGAAGAAGAACCTCTCGTT+CGG | - | chr1_3:68357667-68357686 | None:intergenic | 50.0% | |
| ! | TATTCCAGATGCGGTTCGGA+CGG | - | chr1_3:68357706-68357725 | None:intergenic | 50.0% |
| GACACAAATGTTACCGGTGG+TGG | - | chr1_3:68357775-68357794 | None:intergenic | 50.0% | |
| ATTTGTGTCTACTGCCCTGG+CGG | + | chr1_3:68357786-68357805 | Msa0136480:CDS | 50.0% | |
| CGAATTGCACGCATACTGGT+AGG | - | chr1_3:68357861-68357880 | None:intergenic | 50.0% | |
| TGCTCGAATTGCACGCATAC+TGG | - | chr1_3:68357865-68357884 | None:intergenic | 50.0% | |
| GTATGCGTGCAATTCGAGCA+AGG | + | chr1_3:68357865-68357884 | Msa0136480:CDS | 50.0% | |
| AACTTTCATGTCCCTTCCGG+CGG | + | chr1_3:68358197-68358216 | Msa0136480:CDS | 50.0% | |
| CACCTCTGCCAATGTAGAAG+AGG | + | chr1_3:68358269-68358288 | Msa0136480:CDS | 50.0% | |
| CTCTGCCAATGTAGAAGAGG+CGG | + | chr1_3:68358272-68358291 | Msa0136480:CDS | 50.0% | |
| !! | GAAAGCATTTGTCGCAGGTG+AGG | - | chr1_3:68359277-68359296 | None:intergenic | 50.0% |
| ! | TGGAGTCCAAAGCACTTACG+AGG | + | chr1_3:68359321-68359340 | Msa0136480:CDS | 50.0% |
| TGAAACCGGCATCTTTAGCC+AGG | - | chr1_3:68359405-68359424 | None:intergenic | 50.0% | |
| !! | GGCTAAAGATGCCGGTTTCA+AGG | + | chr1_3:68359405-68359424 | Msa0136480:CDS | 50.0% |
| CAATCTGCACGTTGTCACAG+CGG | + | chr1_3:68359444-68359463 | Msa0136480:intron | 50.0% | |
| ! | GAACTGGGCTTTATGAGCTC+TGG | + | chr1_3:68359931-68359950 | Msa0136480:CDS | 50.0% |
| !! | ATGAGCTCTGGAAAACTGGC+AGG | + | chr1_3:68359943-68359962 | Msa0136480:CDS | 50.0% |
| ATGTCCACAAGTTGCTCAGG+TGG | - | chr1_3:68360105-68360124 | None:intergenic | 50.0% | |
| TCCTTGCAATGGTACCTCCA+TGG | + | chr1_3:68360136-68360155 | Msa0136480:CDS | 50.0% | |
| !! | TCCATGGAGGTACCATTGCA+AGG | - | chr1_3:68360140-68360159 | None:intergenic | 50.0% |
| GCGGGATATTCCAATGCCTT+TGG | + | chr1_3:68360179-68360198 | Msa0136480:CDS | 50.0% | |
| ! | CAATGCCTTTGGTGACCTCT+GGG | + | chr1_3:68360190-68360209 | Msa0136480:CDS | 50.0% |
| ! | AATGCCTTTGGTGACCTCTG+GGG | + | chr1_3:68360191-68360210 | Msa0136480:CDS | 50.0% |
| !! | TGACCTCTGGGGTTGAGAAA+GGG | + | chr1_3:68360202-68360221 | Msa0136480:CDS | 50.0% |
| ATTCCCTTTCTCAACCCCAG+AGG | - | chr1_3:68360208-68360227 | None:intergenic | 50.0% | |
| TACCTGGATTCCAGCTTCTC+TGG | - | chr1_3:68360292-68360311 | None:intergenic | 50.0% | |
| CGAACAAGTTCCACCTCTTC+TGG | - | chr1_3:68360454-68360473 | None:intergenic | 50.0% | |
| GGCACTAATAAGAGAGGCTG+AGG | - | chr1_3:68360555-68360574 | None:intergenic | 50.0% | |
| ! | GTCTAGTTTGTAGCTGGCAC+TGG | + | chr1_3:68360622-68360641 | Msa0136480:intron | 50.0% |
| TGTGCTGTCTTCTCTTGAGC+AGG | + | chr1_3:68360760-68360779 | Msa0136480:intron | 50.0% | |
| GCAGCCGTAACAAACCAACA+AGG | - | chr1_3:68360790-68360809 | None:intergenic | 50.0% | |
| !! | GAACTGCTGTACCGGTTCAT+GGG | + | chr1_3:68360885-68360904 | Msa0136480:CDS | 50.0% |
| TTCTTATGGAGGAGGCTGAG+CGG | + | chr1_3:68361201-68361220 | Msa0136480:CDS | 50.0% | |
| GTATACACGAGCTGACCGTA+TGG | + | chr1_3:68361586-68361605 | Msa0136480:three_prime_UTR | 50.0% | |
| GCGATAGTGTGAGGAAGGGA+CGG | - | chr1_3:68356964-68356983 | None:intergenic | 55.0% | |
| AAGTCACCACGTCCTGGGAA+AGG | + | chr1_3:68357447-68357466 | Msa0136480:CDS | 55.0% | |
| CCTTCAAAGCCTCCTTTCCC+AGG | - | chr1_3:68357462-68357481 | None:intergenic | 55.0% | |
| ! | CCTGGGAAAGGAGGCTTTGA+AGG | + | chr1_3:68357459-68357478 | Msa0136480:CDS | 55.0% |
| TCTGCTGCGTGCCGTAAGTA+TGG | + | chr1_3:68357591-68357610 | Msa0136480:CDS | 55.0% | |
| CAAGTTTGGGTGCACGTGAG+AGG | - | chr1_3:68357617-68357636 | None:intergenic | 55.0% | |
| AGAACCTCTCGTTCGGAGTC+TGG | - | chr1_3:68357660-68357679 | None:intergenic | 55.0% | |
| !! | ACGGGTTTGGCTCGGAGTTT+GGG | - | chr1_3:68357687-68357706 | None:intergenic | 55.0% |
| ! | ATTCCAGATGCGGTTCGGAC+GGG | - | chr1_3:68357705-68357724 | None:intergenic | 55.0% |
| CGGCTATTCCAGATGCGGTT+CGG | - | chr1_3:68357710-68357729 | None:intergenic | 55.0% | |
| GCAATGTGAGGGCAACGATG+AGG | - | chr1_3:68357753-68357772 | None:intergenic | 55.0% | |
| ! | TACCGGTGGTGGCAATGTGA+GGG | - | chr1_3:68357764-68357783 | None:intergenic | 55.0% |
| ! | TTACCGGTGGTGGCAATGTG+AGG | - | chr1_3:68357765-68357784 | None:intergenic | 55.0% |
| GCGTGCAATTCGAGCAAGGT+AGG | + | chr1_3:68357869-68357888 | Msa0136480:intron | 55.0% | |
| ATCACGGTAATCCGCCGGAA+GGG | - | chr1_3:68358211-68358230 | None:intergenic | 55.0% | |
| AATCACGGTAATCCGCCGGA+AGG | - | chr1_3:68358212-68358231 | None:intergenic | 55.0% | |
| CGCCTCTTCTACATTGGCAG+AGG | - | chr1_3:68358274-68358293 | None:intergenic | 55.0% | |
| CGTCACCGCCTCTTCTACAT+TGG | - | chr1_3:68358280-68358299 | None:intergenic | 55.0% | |
| ! | CCAGAGGTCACCAAAGGCAT+TGG | - | chr1_3:68360192-68360211 | None:intergenic | 55.0% |
| ! | CCAATGCCTTTGGTGACCTC+TGG | + | chr1_3:68360189-68360208 | Msa0136480:CDS | 55.0% |
| TCAACCCCAGAGGTCACCAA+AGG | - | chr1_3:68360198-68360217 | None:intergenic | 55.0% | |
| !! | GTGACCTCTGGGGTTGAGAA+AGG | + | chr1_3:68360201-68360220 | Msa0136480:CDS | 55.0% |
| GATGTTCGGACCAGAGAAGC+TGG | + | chr1_3:68360279-68360298 | Msa0136480:CDS | 55.0% | |
| GACCAGAGAAGCTGGAATCC+AGG | + | chr1_3:68360287-68360306 | Msa0136480:CDS | 55.0% | |
| !! | GGAACTGCTGTACCGGTTCA+TGG | + | chr1_3:68360884-68360903 | Msa0136480:CDS | 55.0% |
| TCAGAATCCCGCCCATGAAC+CGG | - | chr1_3:68360899-68360918 | None:intergenic | 55.0% | |
| CGTACTCGTAACCCCCTCTC+TGG | + | chr1_3:68356899-68356918 | Msa0136480:five_prime_UTR | 60.0% | |
| GTGCAGTCGTACCAGAGAGG+GGG | - | chr1_3:68356913-68356932 | None:intergenic | 60.0% | |
| GGTGCAGTCGTACCAGAGAG+GGG | - | chr1_3:68356914-68356933 | None:intergenic | 60.0% | |
| GGGTGCAGTCGTACCAGAGA+GGG | - | chr1_3:68356915-68356934 | None:intergenic | 60.0% | |
| GGCAACTGCAATGGTGGCAG+AGG | + | chr1_3:68357419-68357438 | Msa0136480:CDS | 60.0% | |
| TCACCACGTCCTGGGAAAGG+AGG | + | chr1_3:68357450-68357469 | Msa0136480:CDS | 60.0% | |
| AAGCCTCCTTTCCCAGGACG+TGG | - | chr1_3:68357456-68357475 | None:intergenic | 60.0% | |
| !! | GACGGGTTTGGCTCGGAGTT+TGG | - | chr1_3:68357688-68357707 | None:intergenic | 60.0% |
| ! | AGATGCGGTTCGGACGGGTT+TGG | - | chr1_3:68357700-68357719 | None:intergenic | 60.0% |
| AAACCCGTCCGAACCGCATC+TGG | + | chr1_3:68357699-68357718 | Msa0136480:CDS | 60.0% | |
| TGCCCTCACATTGCCACCAC+CGG | + | chr1_3:68357759-68357778 | Msa0136480:CDS | 60.0% | |
| AATCGGAGTCAGGACCGCCA+GGG | - | chr1_3:68357803-68357822 | None:intergenic | 60.0% | |
| AAATCGGAGTCAGGACCGCC+AGG | - | chr1_3:68357804-68357823 | None:intergenic | 60.0% | |
| !! | CTGCTGTACCGGTTCATGGG+CGG | + | chr1_3:68360888-68360907 | Msa0136480:CDS | 60.0% |
| !! | TGCTGTACCGGTTCATGGGC+GGG | + | chr1_3:68360889-68360908 | Msa0136480:CDS | 60.0% |
| GGGGTGCAGTCGTACCAGAG+AGG | - | chr1_3:68356916-68356935 | None:intergenic | 65.0% | |
| ! | CGGTTCGGACGGGTTTGGCT+CGG | - | chr1_3:68357695-68357714 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 68356882 | 68361646 | 68356882 | ID=Msa0136480;Name=Msa0136480 |
| chr1_3 | mRNA | 68356882 | 68361646 | 68356882 | ID=Msa0136480-mRNA-1;Parent=Msa0136480;Name=Msa0136480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=237|1|1|1|0.88|0.8|10|300|563 |
| chr1_3 | exon | 68356882 | 68357025 | 68356882 | ID=Msa0136480-mRNA-1:exon:23589;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68357324 | 68357886 | 68357324 | ID=Msa0136480-mRNA-1:exon:23590;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68358001 | 68358070 | 68358001 | ID=Msa0136480-mRNA-1:exon:23591;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68358174 | 68358346 | 68358174 | ID=Msa0136480-mRNA-1:exon:23592;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68359252 | 68359426 | 68359252 | ID=Msa0136480-mRNA-1:exon:23593;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68359798 | 68359964 | 68359798 | ID=Msa0136480-mRNA-1:exon:23594;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68360089 | 68360308 | 68360089 | ID=Msa0136480-mRNA-1:exon:23595;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68360430 | 68360534 | 68360430 | ID=Msa0136480-mRNA-1:exon:23596;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68360782 | 68360934 | 68360782 | ID=Msa0136480-mRNA-1:exon:23597;Parent=Msa0136480-mRNA-1 |
| chr1_3 | exon | 68361188 | 68361646 | 68361188 | ID=Msa0136480-mRNA-1:exon:23598;Parent=Msa0136480-mRNA-1 |
| chr1_3 | five_prime_UTR | 68356882 | 68357025 | 68356882 | ID=Msa0136480-mRNA-1:five_prime_utr;Parent=Msa0136480-mRNA-1 |
| chr1_3 | five_prime_UTR | 68357324 | 68357416 | 68357324 | ID=Msa0136480-mRNA-1:five_prime_utr;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68357417 | 68357886 | 68357417 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68358001 | 68358070 | 68358001 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68358174 | 68358346 | 68358174 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68359252 | 68359426 | 68359252 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68359798 | 68359964 | 68359798 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68360089 | 68360308 | 68360089 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68360430 | 68360534 | 68360430 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68360782 | 68360934 | 68360782 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | CDS | 68361188 | 68361346 | 68361188 | ID=Msa0136480-mRNA-1:cds;Parent=Msa0136480-mRNA-1 |
| chr1_3 | three_prime_UTR | 68361347 | 68361646 | 68361347 | ID=Msa0136480-mRNA-1:three_prime_utr;Parent=Msa0136480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
