Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138300 | XP_003592643.2 | 94.747 | 533 | 25 | 1 | 1 | 533 | 1 | 530 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138300 | sp|Q09758|GUP1_SCHPO | 34.274 | 496 | 299 | 9 | 51 | 532 | 95 | 577 | 2.09e-93 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138300 | G7ID88 | 94.747 | 533 | 25 | 1 | 1 | 533 | 1 | 530 | 0.0 | 1034 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043580 | Msa0138300 | 0.899368 | 2.123067e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138300 | MtrunA17_Chr1g0209681 | 94.747 | 533 | 25 | 1 | 1 | 533 | 1 | 530 | 0.0 | 1034 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138300 | AT1G57600.1 | 67.490 | 526 | 171 | 0 | 5 | 530 | 2 | 527 | 0.0 | 778 |
| Msa0138300 | AT1G57600.2 | 67.490 | 526 | 171 | 0 | 5 | 530 | 2 | 527 | 0.0 | 778 |
| Msa0138300 | AT1G57600.3 | 67.490 | 526 | 171 | 0 | 5 | 530 | 2 | 527 | 0.0 | 778 |
| Msa0138300 | AT1G57600.4 | 71.654 | 381 | 108 | 0 | 150 | 530 | 1 | 381 | 0.0 | 604 |
Find 127 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTACTTTCCACTGATAATT+TGG | 0.137054 | 1_3:+71149311 | Msa0138300:CDS |
| GATGCGTTGCACATCAAATT+TGG | 0.145675 | 1_3:+71153939 | Msa0138300:three_prime_UTR |
| ATCAGCCGCAAAAGCATTTA+AGG | 0.184863 | 1_3:+71153070 | Msa0138300:CDS |
| TGGCAATTATTAATACATTT+TGG | 0.194876 | 1_3:-71152648 | None:intergenic |
| CCTCACGAGCCATTTGTTAA+AGG | 0.212104 | 1_3:-71152706 | None:intergenic |
| AATTAGGCTGAAAGCTCTTT+TGG | 0.234805 | 1_3:+71153181 | Msa0138300:intron |
| GTTAGAAATGTTATATTCTA+TGG | 0.241561 | 1_3:+71152005 | Msa0138300:CDS |
| TTTAAAATGGATCAAGATAA+TGG | 0.242636 | 1_3:-71153909 | None:intergenic |
| TGTCGTATACCTTTGTTATT+TGG | 0.247307 | 1_3:+71150919 | Msa0138300:CDS |
| CACATGCTATCAAGCTTTAC+AGG | 0.247959 | 1_3:+71150697 | Msa0138300:CDS |
| CGCATCGGCAATCTTTAAAA+TGG | 0.251251 | 1_3:-71153922 | None:intergenic |
| CGTTGTCATATTTGCAAATC+AGG | 0.258934 | 1_3:+71150671 | Msa0138300:CDS |
| AAAGAACTCTTTCTGCTTCC+AGG | 0.261759 | 1_3:-71147901 | None:intergenic |
| ACTACAATGCCTTTGCTAAT+AGG | 0.269390 | 1_3:+71152081 | Msa0138300:CDS |
| GCCACAACTTGGAAGGCTTT+TGG | 0.272160 | 1_3:+71152667 | Msa0138300:CDS |
| CCTGTTCTTACACTTGTCTT+TGG | 0.273288 | 1_3:+71148299 | Msa0138300:CDS |
| GGATATTCATTCTCAATGTT+TGG | 0.278766 | 1_3:+71149376 | Msa0138300:CDS |
| GTCATGCATTTATCCGGTTC+AGG | 0.298711 | 1_3:-71153804 | None:intergenic |
| GCCAAAGATAGAGGAGAAAA+TGG | 0.319156 | 1_3:-71154254 | None:intergenic |
| GACGTGTTCATCATTGGATA+TGG | 0.322150 | 1_3:+71152234 | Msa0138300:CDS |
| TTCACAGGGCTGCCTGTACT+TGG | 0.328776 | 1_3:+71153615 | Msa0138300:intron |
| ACAATTACCGCGGCAGCTTT+AGG | 0.332237 | 1_3:+71149503 | Msa0138300:CDS |
| CTGATACTTAACAGTTTGTT+TGG | 0.332551 | 1_3:+71153855 | Msa0138300:three_prime_UTR |
| GATATTCATTCTCAATGTTT+GGG | 0.348229 | 1_3:+71149377 | Msa0138300:CDS |
| CGTGAACTCAGTGCTGTTGC+TGG | 0.351376 | 1_3:+71153217 | Msa0138300:CDS |
| AATCATACATTGAGGTGATT+AGG | 0.358788 | 1_3:-71148159 | None:intergenic |
| TTGGACCAAGCGGTATTAAC+TGG | 0.361852 | 1_3:+71153493 | Msa0138300:CDS |
| GGTATGTGTACATTCCTCTT+GGG | 0.362421 | 1_3:+71152814 | Msa0138300:intron |
| GCTTTGGATTGGATTATCAT+TGG | 0.370496 | 1_3:+71149924 | Msa0138300:CDS |
| ATGCGTTGCACATCAAATTT+GGG | 0.390739 | 1_3:+71153940 | Msa0138300:three_prime_UTR |
| TATGCACCGCTTTATATTGC+CGG | 0.391803 | 1_3:+71150944 | Msa0138300:CDS |
| AAAGCGTTGAAGCTCACTAT+TGG | 0.394223 | 1_3:-71150968 | None:intergenic |
| ACTTAACAGTTTGTTTGGCT+TGG | 0.410155 | 1_3:+71153860 | Msa0138300:three_prime_UTR |
| GATCACTACAAACAACTATT+CGG | 0.417667 | 1_3:+71148114 | Msa0138300:intron |
| ACCTTAGGAAGCTTCTTTCA+TGG | 0.422815 | 1_3:+71153003 | Msa0138300:intron |
| CCTATGGACGTGTTCATCAT+TGG | 0.423881 | 1_3:+71152228 | Msa0138300:CDS |
| TGAAGAAAGCCCTCATCAAA+TGG | 0.426260 | 1_3:-71148340 | None:intergenic |
| AGGTATGTGTACATTCCTCT+TGG | 0.428755 | 1_3:+71152813 | Msa0138300:intron |
| AAACAAAGGTCGCCCTGAAC+CGG | 0.429639 | 1_3:+71153791 | Msa0138300:exon |
| GGCATGCTTCCTTTAACAAA+TGG | 0.429696 | 1_3:+71152697 | Msa0138300:CDS |
| TATTAATAATTGCCACAACT+TGG | 0.430954 | 1_3:+71152656 | Msa0138300:CDS |
| ATGAACAAGGACAACTATAA+TGG | 0.432494 | 1_3:+71147864 | Msa0138300:CDS |
| TCGTCAATAGCGTCGGCAAC+AGG | 0.432956 | 1_3:+71147789 | Msa0138300:five_prime_UTR |
| CTCTGTAATCGAATTTATGA+AGG | 0.438020 | 1_3:+71149355 | Msa0138300:CDS |
| TTAAAATGGATCAAGATAAT+GGG | 0.442652 | 1_3:-71153908 | None:intergenic |
| TGGCACATATGTTTCAACTT+TGG | 0.453371 | 1_3:+71149526 | Msa0138300:CDS |
| ACAGGGCTGCCTGTACTTGG+AGG | 0.454380 | 1_3:+71153618 | Msa0138300:intron |
| TTTATTCTTTATCCCTGAGT+TGG | 0.455828 | 1_3:+71153040 | Msa0138300:CDS |
| CAAGTAGTCATGCATTTATC+CGG | 0.457005 | 1_3:-71153810 | None:intergenic |
| GTGGAAGCACTTATCTCCTA+TGG | 0.462834 | 1_3:+71152212 | Msa0138300:CDS |
| CACTTCTGGCCCATTTGATG+AGG | 0.469438 | 1_3:+71148330 | Msa0138300:CDS |
| ACGTGTTCATCATTGGATAT+GGG | 0.472325 | 1_3:+71152235 | Msa0138300:CDS |
| TGAGAGGAATGTCTGTTGTC+TGG | 0.475739 | 1_3:+71148372 | Msa0138300:CDS |
| GCGCATGATAAGCTTTGGAT+TGG | 0.476068 | 1_3:+71149913 | Msa0138300:CDS |
| TTGTTAACAGGTGGCAAACC+TGG | 0.478504 | 1_3:+71153458 | Msa0138300:intron |
| ACAACTATTCGGTTTACGCC+CGG | 0.479775 | 1_3:+71148125 | Msa0138300:CDS |
| GAATTGTGTTGTAGGTGAAC+GGG | 0.479932 | 1_3:+71152604 | Msa0138300:intron |
| ATATACCGCGGGAGAGTTGA+AGG | 0.480063 | 1_3:-71147974 | None:intergenic |
| TCCAAAAGCCTTCCAAGTTG+TGG | 0.490739 | 1_3:-71152668 | None:intergenic |
| CCTTAGGAAGCTTCTTTCAT+GGG | 0.495974 | 1_3:+71153004 | Msa0138300:intron |
| GGAAGCTTCTTTCATGGGCG+TGG | 0.496623 | 1_3:+71153009 | Msa0138300:intron |
| CCAAAGACAAGTGTAAGAAC+AGG | 0.498674 | 1_3:-71148299 | None:intergenic |
| TCATGCATTTATCCGGTTCA+GGG | 0.508646 | 1_3:-71153803 | None:intergenic |
| CGAGAGAGAAAAGGAGGGAG+AGG | 0.509377 | 1_3:-71147816 | None:intergenic |
| TGATTAGGAATGAGCCATCC+CGG | 0.509630 | 1_3:-71148144 | None:intergenic |
| CAACTATTCGGTTTACGCCC+GGG | 0.510122 | 1_3:+71148126 | Msa0138300:CDS |
| AATAATTGCCACAACTTGGA+AGG | 0.511611 | 1_3:+71152660 | Msa0138300:CDS |
| GAAGAAAGCCCTCATCAAAT+GGG | 0.511777 | 1_3:-71148339 | None:intergenic |
| CACTAATCGCGAGAGAGAAA+AGG | 0.512814 | 1_3:-71147825 | None:intergenic |
| AAGAACTCTTTCTGCTTCCA+GGG | 0.514162 | 1_3:-71147900 | None:intergenic |
| TAAATGCATGACTACTTGTC+TGG | 0.514826 | 1_3:+71153815 | Msa0138300:three_prime_UTR |
| AGTCTACACATCAACAAGTT+CGG | 0.515007 | 1_3:+71150893 | Msa0138300:CDS |
| TTATATTCTATGGTTTCCGT+TGG | 0.515645 | 1_3:+71152015 | Msa0138300:CDS |
| ACTTCTGGCCCATTTGATGA+GGG | 0.519507 | 1_3:+71148331 | Msa0138300:CDS |
| ATAAGCAAGCCTCCAAGTAC+AGG | 0.522498 | 1_3:-71153627 | None:intergenic |
| GTATGTGTACATTCCTCTTG+GGG | 0.525167 | 1_3:+71152815 | Msa0138300:CDS |
| ATGCTCCGTGCAGATATGAT+AGG | 0.529167 | 1_3:-71148415 | None:intergenic |
| TTCTTCAATTTCAATGTGAG+AGG | 0.534160 | 1_3:+71148356 | Msa0138300:CDS |
| TATATTCTATGGTTTCCGTT+GGG | 0.539722 | 1_3:+71152016 | Msa0138300:CDS |
| TGCTTACAAAGAAAAGAAGA+AGG | 0.545743 | 1_3:+71147736 | Msa0138300:five_prime_UTR |
| TTCAGGTCTTAAACTTCATG+TGG | 0.546074 | 1_3:+71152465 | Msa0138300:intron |
| TAGGTTTGCATAATGAAACT+AGG | 0.550020 | 1_3:+71154065 | Msa0138300:three_prime_UTR |
| ATTTATATTGCAGGCAACAA+TGG | 0.550456 | 1_3:+71149470 | Msa0138300:intron |
| GTTTGGCTTGGAGATATCTG+TGG | 0.551371 | 1_3:+71153872 | Msa0138300:three_prime_UTR |
| AGGATGTCTCAGATTCTCAA+TGG | 0.553687 | 1_3:+71148255 | Msa0138300:intron |
| AGCAACCAGTTAATACCGCT+TGG | 0.553971 | 1_3:-71153498 | None:intergenic |
| CCAATGATGAACACGTCCAT+AGG | 0.560827 | 1_3:-71152228 | None:intergenic |
| AAATTTGATGTGCAACGCAT+CGG | 0.566308 | 1_3:-71153937 | None:intergenic |
| TATTTCTGCAGATGTTTGCA+CGG | 0.566514 | 1_3:+71149284 | Msa0138300:intron |
| TTTGGCTTGGAGATATCTGT+GGG | 0.568060 | 1_3:+71153873 | Msa0138300:three_prime_UTR |
| TATCATATCTGCACGGAGCA+TGG | 0.568139 | 1_3:+71148417 | Msa0138300:CDS |
| ATCATTGCCAACTGAAAACA+AGG | 0.569913 | 1_3:+71154002 | Msa0138300:three_prime_UTR |
| GGAATTGTGTTGTAGGTGAA+CGG | 0.574106 | 1_3:+71152603 | Msa0138300:intron |
| CGTGTTCATCATTGGATATG+GGG | 0.576460 | 1_3:+71152236 | Msa0138300:CDS |
| TAATCGCGAGAGAGAAAAGG+AGG | 0.580358 | 1_3:-71147822 | None:intergenic |
| TATTCGGTTTACGCCCGGGA+TGG | 0.580400 | 1_3:+71148130 | Msa0138300:CDS |
| GTTGAAGCTCACTATTGGAC+CGG | 0.582168 | 1_3:-71150963 | None:intergenic |
| CCTTTAACAAATGGCTCGTG+AGG | 0.584960 | 1_3:+71152706 | Msa0138300:CDS |
| GATTAGGAATGAGCCATCCC+GGG | 0.585902 | 1_3:-71148143 | None:intergenic |
| TTGTAACTCCAAATTATCAG+TGG | 0.599794 | 1_3:-71149319 | None:intergenic |
| TAACAGGTGGCAAACCTGGT+TGG | 0.602168 | 1_3:+71153462 | Msa0138300:intron |
| ATTACCGCGGCAGCTTTAGG+TGG | 0.608263 | 1_3:+71149506 | Msa0138300:CDS |
| TATATTGCAGGCAACAATGG+AGG | 0.611356 | 1_3:+71149473 | Msa0138300:intron |
| AAGCGCCCACCTATTAGCAA+AGG | 0.620476 | 1_3:-71152090 | None:intergenic |
| CTCGTCGTCGTCAATAGCGT+CGG | 0.630849 | 1_3:+71147782 | Msa0138300:five_prime_UTR |
| TATACCGCGGGAGAGTTGAA+GGG | 0.631954 | 1_3:-71147973 | None:intergenic |
| ATGACTACTTGTCTGGTGGT+AGG | 0.632611 | 1_3:+71153822 | Msa0138300:three_prime_UTR |
| CCATCTGGCATGATTTAGAG+TGG | 0.634701 | 1_3:+71152886 | Msa0138300:CDS |
| GTCCAATAACAAAACCAACC+AGG | 0.634921 | 1_3:-71153476 | None:intergenic |
| CGCTCCCTTCAACTCTCCCG+CGG | 0.636602 | 1_3:+71147969 | Msa0138300:CDS |
| AGTTACAATCACTTGCCTCG+TGG | 0.636614 | 1_3:+71153243 | Msa0138300:CDS |
| TATGTGTACATTCCTCTTGG+GGG | 0.644094 | 1_3:+71152816 | Msa0138300:CDS |
| GCTTACAAAGAAAAGAAGAA+GGG | 0.644208 | 1_3:+71147737 | Msa0138300:five_prime_UTR |
| CCACTCTAAATCATGCCAGA+TGG | 0.644443 | 1_3:-71152886 | None:intergenic |
| GTTGTAGGTGAACGGGATTG+AGG | 0.646607 | 1_3:+71152611 | Msa0138300:intron |
| ACAGTAGATTGCGATGAACA+AGG | 0.655075 | 1_3:+71147851 | Msa0138300:exon |
| GCCTACCTATCATATCTGCA+CGG | 0.660232 | 1_3:+71148410 | Msa0138300:CDS |
| AATCGCGAGAGAGAAAAGGA+GGG | 0.665539 | 1_3:-71147821 | None:intergenic |
| GGATAAAACACAATACCCAA+CGG | 0.670518 | 1_3:-71152031 | None:intergenic |
| TGTGCCACCTAAAGCTGCCG+CGG | 0.672567 | 1_3:-71149510 | None:intergenic |
| ACATAGATGAAGCAAAACAA+AGG | 0.675210 | 1_3:+71153777 | Msa0138300:CDS |
| GTGCATACACCAAATAACAA+AGG | 0.675286 | 1_3:-71150928 | None:intergenic |
| GATGTGTCATGAGCTCAACA+AGG | 0.689481 | 1_3:-71152052 | None:intergenic |
| ATGGTAGAAAGAGTTCACCC+TGG | 0.691169 | 1_3:+71147883 | Msa0138300:CDS |
| TCCGTGCAGATATGATAGGT+AGG | 0.700523 | 1_3:-71148411 | None:intergenic |
| ATTGGACCGGCAATATAAAG+CGG | 0.704232 | 1_3:-71150950 | None:intergenic |
| ATGCATGACTACTTGTCTGG+TGG | 0.704811 | 1_3:+71153818 | Msa0138300:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTATTTATCGT+CGG | + | chr1_3:71148082-71148101 | Msa0138300:intron | 10.0% |
| !!! | AAGTTTTAACATATTTTTTT+AGG | + | chr1_3:71149123-71149142 | Msa0138300:intron | 10.0% |
| !!! | TCTTATGATAATTTTTAATT+AGG | + | chr1_3:71149743-71149762 | Msa0138300:intron | 10.0% |
| !! | GAAACTATATAATTATAAAA+TGG | - | chr1_3:71150813-71150832 | None:intergenic | 10.0% |
| !! | ATAATTATATAGTTTCTATT+CGG | + | chr1_3:71150817-71150836 | Msa0138300:intron | 10.0% |
| !!! | ATAATTTTAATTTCATTATC+AGG | + | chr1_3:71150865-71150884 | Msa0138300:intron | 10.0% |
| !! | AAGATATTATTTGATTAAAT+TGG | + | chr1_3:71151146-71151165 | Msa0138300:intron | 10.0% |
| !! | AGAATTATAATAATCATATA+TGG | - | chr1_3:71153297-71153316 | None:intergenic | 10.0% |
| !! | AAAGTAAATCTATTAAAAAT+AGG | + | chr1_3:71154041-71154060 | Msa0138300:three_prime_UTR | 10.0% |
| !! | AAGTAAATCTATTAAAAATA+GGG | + | chr1_3:71154042-71154061 | Msa0138300:three_prime_UTR | 10.0% |
| !! | ATAAAATACTTACAAAGAAA+TGG | - | chr1_3:71148210-71148229 | None:intergenic | 15.0% |
| !!! | TATTAATTTTCTTCTTGTTA+AGG | + | chr1_3:71148567-71148586 | Msa0138300:CDS | 15.0% |
| !! | TGTAGTAAACTTAATTATAT+AGG | + | chr1_3:71148941-71148960 | Msa0138300:intron | 15.0% |
| !!! | AAATATACTTTGAATAGTTT+TGG | + | chr1_3:71149007-71149026 | Msa0138300:intron | 15.0% |
| !!! | AATATACTTTGAATAGTTTT+GGG | + | chr1_3:71149008-71149027 | Msa0138300:intron | 15.0% |
| !!! | TGTTTGTATTTACAATTTTA+TGG | + | chr1_3:71149415-71149434 | Msa0138300:intron | 15.0% |
| !!! | ATTTTTAATTAGGATACTTA+TGG | + | chr1_3:71149753-71149772 | Msa0138300:intron | 15.0% |
| !!! | TTTTTAATTAGGATACTTAT+GGG | + | chr1_3:71149754-71149773 | Msa0138300:intron | 15.0% |
| !!! | ATATTTAAATAATTTTGCCT+GGG | + | chr1_3:71150322-71150341 | Msa0138300:intron | 15.0% |
| !!! | TTTTAGCTTAAAAATAAACA+TGG | - | chr1_3:71150455-71150474 | None:intergenic | 15.0% |
| !! | ATGAAATTAAAATTATGTAC+TGG | - | chr1_3:71150861-71150880 | None:intergenic | 15.0% |
| !! | ATATTATTTGATTAAATTGG+AGG | + | chr1_3:71151149-71151168 | Msa0138300:intron | 15.0% |
| !!! | TTTTTGTTTTTATGAAATAG+CGG | - | chr1_3:71151335-71151354 | None:intergenic | 15.0% |
| !! | AAACAAAAACAACAAAAATA+AGG | + | chr1_3:71151346-71151365 | Msa0138300:intron | 15.0% |
| !! | TTGTTAAACAAAAAAATAAC+AGG | + | chr1_3:71151521-71151540 | Msa0138300:intron | 15.0% |
| !! | AAAAAATTGAATATAACATG+TGG | - | chr1_3:71152133-71152152 | None:intergenic | 15.0% |
| !!! | TTTACTCTAATTTTATTGTA+TGG | + | chr1_3:71152150-71152169 | Msa0138300:intron | 15.0% |
| !!! | TCAAATTTAAGTTATCATTT+GGG | - | chr1_3:71152779-71152798 | None:intergenic | 15.0% |
| !! | AAATGATAACTTAAATTTGA+CGG | + | chr1_3:71152779-71152798 | Msa0138300:intron | 15.0% |
| !!! | AGTTACCATTATTAATTTTT+TGG | + | chr1_3:71153343-71153362 | Msa0138300:intron | 15.0% |
| !!! | TTAAGTTTTAATTCTTTTTC+TGG | + | chr1_3:71154160-71154179 | Msa0138300:three_prime_UTR | 15.0% |
| !!! | TTAGTTACAATATTTCTAGT+TGG | + | chr1_3:71148617-71148636 | Msa0138300:intron | 20.0% |
| !! | GATATAGAAATCTAGTTAAA+AGG | + | chr1_3:71148732-71148751 | Msa0138300:intron | 20.0% |
| !!! | ATTTGTGTATTTTTGTTTCT+AGG | + | chr1_3:71148846-71148865 | Msa0138300:intron | 20.0% |
| !! | GTAAACTTAATTATATAGGA+AGG | + | chr1_3:71148945-71148964 | Msa0138300:intron | 20.0% |
| !! | TCAAAGTATATTTCTTTAGT+AGG | - | chr1_3:71149000-71149019 | None:intergenic | 20.0% |
| !!! | ATATACTTTGAATAGTTTTG+GGG | + | chr1_3:71149009-71149028 | Msa0138300:intron | 20.0% |
| !!! | TATTTTTTTAGGAACATGAA+TGG | + | chr1_3:71149134-71149153 | Msa0138300:intron | 20.0% |
| !!! | TTCCTAAATAGATATTGTTT+TGG | + | chr1_3:71149192-71149211 | Msa0138300:intron | 20.0% |
| !!! | AATATCATTTTAGTCTTACA+TGG | - | chr1_3:71149268-71149287 | None:intergenic | 20.0% |
| !!! | TGTATTTACAATTTTATGGT+AGG | + | chr1_3:71149419-71149438 | Msa0138300:intron | 20.0% |
| !! | TATAAATACATAGCTTAAGT+GGG | - | chr1_3:71149457-71149476 | None:intergenic | 20.0% |
| !! | ATATAAATACATAGCTTAAG+TGG | - | chr1_3:71149458-71149477 | None:intergenic | 20.0% |
| !! | AAATATGAACCATAAATACA+TGG | - | chr1_3:71149591-71149610 | None:intergenic | 20.0% |
| !!! | GATATTTAAATAATTTTGCC+TGG | + | chr1_3:71150321-71150340 | Msa0138300:intron | 20.0% |
| !!! | GCTTAAATAGTCATATTTTT+AGG | + | chr1_3:71150501-71150520 | Msa0138300:intron | 20.0% |
| !!! | TACCATTTAAAATAAAGCAT+GGG | + | chr1_3:71150730-71150749 | Msa0138300:intron | 20.0% |
| !! | TTATAAAATGGAAAACTTGA+GGG | - | chr1_3:71150801-71150820 | None:intergenic | 20.0% |
| !! | ATTATAAAATGGAAAACTTG+AGG | - | chr1_3:71150802-71150821 | None:intergenic | 20.0% |
| !!! | TTTTCCGAAATTTAAGTATA+TGG | + | chr1_3:71151123-71151142 | Msa0138300:intron | 20.0% |
| !! | TCTTCCATATACTTAAATTT+CGG | - | chr1_3:71151130-71151149 | None:intergenic | 20.0% |
| !! | TTTCTCTTAAAATGAAATAG+CGG | + | chr1_3:71151677-71151696 | Msa0138300:intron | 20.0% |
| !! | GTTAGAAATGTTATATTCTA+TGG | + | chr1_3:71152005-71152024 | Msa0138300:CDS | 20.0% |
| !! | AAAAAAAAAAAAAAACGCTG+TGG | - | chr1_3:71152418-71152437 | None:intergenic | 20.0% |
| !!! | TGGCAATTATTAATACATTT+TGG | - | chr1_3:71152651-71152670 | None:intergenic | 20.0% |
| !!! | GTCAAATTTAAGTTATCATT+TGG | - | chr1_3:71152780-71152799 | None:intergenic | 20.0% |
| !! | AATGATAACTTAAATTTGAC+GGG | + | chr1_3:71152780-71152799 | Msa0138300:intron | 20.0% |
| !! | TTATAATTCTTAGCTATTCT+CGG | + | chr1_3:71153307-71153326 | Msa0138300:intron | 20.0% |
| !! | TCTGTTATGTTAAAAAGTAA+AGG | - | chr1_3:71153559-71153578 | None:intergenic | 20.0% |
| !! | TTAAAATGGATCAAGATAAT+GGG | - | chr1_3:71153911-71153930 | None:intergenic | 20.0% |
| !!! | TTTAAAATGGATCAAGATAA+TGG | - | chr1_3:71153912-71153931 | None:intergenic | 20.0% |
| !! | AAATCTATTAAAAATAGGGT+AGG | + | chr1_3:71154046-71154065 | Msa0138300:three_prime_UTR | 20.0% |
| !!! | AAAATGGTTTTGTATAAGAT+TGG | - | chr1_3:71154241-71154260 | None:intergenic | 20.0% |
| ! | AAGAAGAAATAAATATACCG+CGG | - | chr1_3:71147989-71148008 | None:intergenic | 25.0% |
| ! | TAAACAGGTTATACTATACA+TGG | - | chr1_3:71148020-71148039 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTTATCGTCGGT+CGG | + | chr1_3:71148086-71148105 | Msa0138300:intron | 25.0% |
| !!! | AGTTTGTTTGTTATGTGTAA+AGG | + | chr1_3:71148235-71148254 | Msa0138300:intron | 25.0% |
| !!! | GGTAAAAGGTATTAATCTAT+GGG | - | chr1_3:71148909-71148928 | None:intergenic | 25.0% |
| !!! | TGGTAAAAGGTATTAATCTA+TGG | - | chr1_3:71148910-71148929 | None:intergenic | 25.0% |
| !! | TTTACTACACAGTTTTACTA+TGG | - | chr1_3:71148930-71148949 | None:intergenic | 25.0% |
| ! | TATTTCTTTAGTAGGATGTA+GGG | - | chr1_3:71148992-71149011 | None:intergenic | 25.0% |
| ! | ATATTTCTTTAGTAGGATGT+AGG | - | chr1_3:71148993-71149012 | None:intergenic | 25.0% |
| ! | GTCCAAAACAATATCTATTT+AGG | - | chr1_3:71149197-71149216 | None:intergenic | 25.0% |
| !!! | TAGATATTGTTTTGGACTTT+TGG | + | chr1_3:71149200-71149219 | Msa0138300:intron | 25.0% |
| ! | GATATTCATTCTCAATGTTT+GGG | + | chr1_3:71149377-71149396 | Msa0138300:CDS | 25.0% |
| ! | AAGCTATGTATTTATATTGC+AGG | + | chr1_3:71149461-71149480 | Msa0138300:intron | 25.0% |
| ! | TGAAATTGTCCATGTATTTA+TGG | + | chr1_3:71149579-71149598 | Msa0138300:intron | 25.0% |
| ! | GTATAACTTAATATGAATGC+TGG | - | chr1_3:71149678-71149697 | None:intergenic | 25.0% |
| ! | GTATATAAGTTTCCATTCTA+CGG | + | chr1_3:71150013-71150032 | Msa0138300:intron | 25.0% |
| !! | TTTTTCTGCATATTTGCTTA+TGG | + | chr1_3:71150410-71150429 | Msa0138300:intron | 25.0% |
| ! | AAATTACTATAGATCACATG+AGG | - | chr1_3:71150609-71150628 | None:intergenic | 25.0% |
| !! | CTACCATTTAAAATAAAGCA+TGG | + | chr1_3:71150729-71150748 | Msa0138300:intron | 25.0% |
| !! | ACCATTTAAAATAAAGCATG+GGG | + | chr1_3:71150731-71150750 | Msa0138300:intron | 25.0% |
| ! | TGAATTTCATTACAGTTGTA+TGG | + | chr1_3:71151043-71151062 | Msa0138300:intron | 25.0% |
| ! | ACAATCATAGTAGTTAATAG+CGG | + | chr1_3:71151248-71151267 | Msa0138300:intron | 25.0% |
| !! | GTTTTATATGAACAAAACAG+AGG | + | chr1_3:71151388-71151407 | Msa0138300:intron | 25.0% |
| ! | AACTAGAACAAAAAAGTAAC+AGG | + | chr1_3:71151481-71151500 | Msa0138300:intron | 25.0% |
| ! | CTCGGTTTAAAAAAAAACAA+GGG | - | chr1_3:71151644-71151663 | None:intergenic | 25.0% |
| ! | AGAAAATACAAAATTGTCCT+CGG | - | chr1_3:71151662-71151681 | None:intergenic | 25.0% |
| !! | CTAACTGAATTACTATTTTG+AGG | - | chr1_3:71151990-71152009 | None:intergenic | 25.0% |
| ! | TTGTATTATGTATCTGTTTC+AGG | + | chr1_3:71152448-71152467 | Msa0138300:intron | 25.0% |
| !! | TTAATTTGGAATTGTGTTGT+AGG | + | chr1_3:71152596-71152615 | Msa0138300:intron | 25.0% |
| !!! | ATACATTTTGGCATATTTTC+TGG | - | chr1_3:71152639-71152658 | None:intergenic | 25.0% |
| ! | TATTAATAATTGCCACAACT+TGG | + | chr1_3:71152656-71152675 | Msa0138300:CDS | 25.0% |
| !! | TTTAACCATGATTTTCCATT+TGG | + | chr1_3:71152741-71152760 | Msa0138300:intron | 25.0% |
| ! | AAAAACCAAATGGAAAATCA+TGG | - | chr1_3:71152749-71152768 | None:intergenic | 25.0% |
| ! | ATGATAACTTAAATTTGACG+GGG | + | chr1_3:71152781-71152800 | Msa0138300:intron | 25.0% |
| ! | GAAAAAGCTCTTAAATGTAT+GGG | + | chr1_3:71152845-71152864 | Msa0138300:CDS | 25.0% |
| ! | GTACATCTTTACAAATAGAA+TGG | - | chr1_3:71152943-71152962 | None:intergenic | 25.0% |
| ! | TTGTAAAGATGTACATTCTT+TGG | + | chr1_3:71152949-71152968 | Msa0138300:intron | 25.0% |
| !! | TATTACCTTAAATGCTTTTG+CGG | - | chr1_3:71153078-71153097 | None:intergenic | 25.0% |
| ! | GAAATTAGATGAGAAAAACA+AGG | - | chr1_3:71153109-71153128 | None:intergenic | 25.0% |
| ! | TTTCTCATCTAATTTCTCAA+CGG | + | chr1_3:71153113-71153132 | Msa0138300:intron | 25.0% |
| ! | TGGAGTTAAATTTCGAAATT+AGG | + | chr1_3:71153165-71153184 | Msa0138300:intron | 25.0% |
| !! | TTGCTTATGACATTTTATGT+TGG | + | chr1_3:71153642-71153661 | Msa0138300:CDS | 25.0% |
| ! | ATTATTAGAGAACAAATGTG+AGG | - | chr1_3:71153726-71153745 | None:intergenic | 25.0% |
| ! | CTTCTTTTCTTTGTAAGCAA+CGG | - | chr1_3:71147735-71147754 | None:intergenic | 30.0% |
| TGCTTACAAAGAAAAGAAGA+AGG | + | chr1_3:71147736-71147755 | Msa0138300:five_prime_UTR | 30.0% | |
| GCTTACAAAGAAAAGAAGAA+GGG | + | chr1_3:71147737-71147756 | Msa0138300:five_prime_UTR | 30.0% | |
| ATGAACAAGGACAACTATAA+TGG | + | chr1_3:71147864-71147883 | Msa0138300:CDS | 30.0% | |
| AGAAGAAATAAATATACCGC+GGG | - | chr1_3:71147988-71148007 | None:intergenic | 30.0% | |
| ACCTGTTTATGTAGATGATA+TGG | + | chr1_3:71148031-71148050 | Msa0138300:intron | 30.0% | |
| GATCACTACAAACAACTATT+CGG | + | chr1_3:71148114-71148133 | Msa0138300:intron | 30.0% | |
| AATCATACATTGAGGTGATT+AGG | - | chr1_3:71148162-71148181 | None:intergenic | 30.0% | |
| CTTACAAAGAAATGGTGATA+AGG | - | chr1_3:71148202-71148221 | None:intergenic | 30.0% | |
| !!! | CTTTGGAATTTTTACACTTC+TGG | + | chr1_3:71148316-71148335 | Msa0138300:CDS | 30.0% |
| TTCTTCAATTTCAATGTGAG+AGG | + | chr1_3:71148356-71148375 | Msa0138300:CDS | 30.0% | |
| ! | CACAGTTTTACTATGGTAAA+AGG | - | chr1_3:71148923-71148942 | None:intergenic | 30.0% |
| AGAGAGATTTGTATATCCAA+TGG | + | chr1_3:71149055-71149074 | Msa0138300:intron | 30.0% | |
| AGATTTGTATATCCAATGGT+GGG | + | chr1_3:71149059-71149078 | Msa0138300:intron | 30.0% | |
| TATCATAGGTCTCATTCTAT+TGG | + | chr1_3:71149086-71149105 | Msa0138300:intron | 30.0% | |
| AGTACTTTCCACTGATAATT+TGG | + | chr1_3:71149311-71149330 | Msa0138300:CDS | 30.0% | |
| TTGTAACTCCAAATTATCAG+TGG | - | chr1_3:71149322-71149341 | None:intergenic | 30.0% | |
| CTCTGTAATCGAATTTATGA+AGG | + | chr1_3:71149355-71149374 | Msa0138300:CDS | 30.0% | |
| GGATATTCATTCTCAATGTT+TGG | + | chr1_3:71149376-71149395 | Msa0138300:CDS | 30.0% | |
| ATTTATATTGCAGGCAACAA+TGG | + | chr1_3:71149470-71149489 | Msa0138300:intron | 30.0% | |
| ! | TGGGCTGGAATATTAAAATT+TGG | + | chr1_3:71149773-71149792 | Msa0138300:intron | 30.0% |
| TTTCTAAGCATAGTTGTTTG+TGG | + | chr1_3:71149880-71149899 | Msa0138300:intron | 30.0% | |
| !! | TCAAGATTCTCATTTTGATC+CGG | + | chr1_3:71149952-71149971 | Msa0138300:CDS | 30.0% |
| ! | CTTTTGATATTACCTCAAAG+TGG | + | chr1_3:71150286-71150305 | Msa0138300:intron | 30.0% |
| CTTAACAATTATGTAAGACC+AGG | + | chr1_3:71150353-71150372 | Msa0138300:intron | 30.0% | |
| TAATTAAACTTAAACCAGCC+TGG | - | chr1_3:71150374-71150393 | None:intergenic | 30.0% | |
| !! | AGGCTGGTTTAAGTTTAATT+AGG | + | chr1_3:71150373-71150392 | Msa0138300:intron | 30.0% |
| !!! | ACCCCATGCTTTATTTTAAA+TGG | - | chr1_3:71150735-71150754 | None:intergenic | 30.0% |
| !! | TGTCGTATACCTTTGTTATT+TGG | + | chr1_3:71150919-71150938 | Msa0138300:CDS | 30.0% |
| !!! | TGTGACTGCAAGTTATTTTT+AGG | + | chr1_3:71151004-71151023 | Msa0138300:intron | 30.0% |
| CTTAAATTTCGGAAAATAGC+AGG | - | chr1_3:71151119-71151138 | None:intergenic | 30.0% | |
| TGTAATCAGTCAAAACACTT+TGG | + | chr1_3:71151210-71151229 | Msa0138300:intron | 30.0% | |
| CCTCGGTTTAAAAAAAAACA+AGG | - | chr1_3:71151645-71151664 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTTTTTTAAACCG+AGG | + | chr1_3:71151642-71151661 | Msa0138300:intron | 30.0% |
| GTATTCATAGTAGTCAATAG+CGG | - | chr1_3:71151813-71151832 | None:intergenic | 30.0% | |
| AAAAGGACTACTTCTGATTA+TGG | - | chr1_3:71151857-71151876 | None:intergenic | 30.0% | |
| CATCAATATAACATAGACTC+AGG | - | chr1_3:71151934-71151953 | None:intergenic | 30.0% | |
| CTGAGTCTATGTTATATTGA+TGG | + | chr1_3:71151932-71151951 | Msa0138300:intron | 30.0% | |
| ! | CTATGTTATATTGATGGTAC+TGG | + | chr1_3:71151938-71151957 | Msa0138300:intron | 30.0% |
| TTATATTCTATGGTTTCCGT+TGG | + | chr1_3:71152015-71152034 | Msa0138300:CDS | 30.0% | |
| TATATTCTATGGTTTCCGTT+GGG | + | chr1_3:71152016-71152035 | Msa0138300:CDS | 30.0% | |
| ! | TCTTCATCAATTTTATCCAG+CGG | + | chr1_3:71152186-71152205 | Msa0138300:intron | 30.0% |
| TAAACGTCCATGTATATTCA+TGG | + | chr1_3:71152564-71152583 | Msa0138300:intron | 30.0% | |
| ACTTTCTCCATGAATATACA+TGG | - | chr1_3:71152574-71152593 | None:intergenic | 30.0% | |
| CATGGAGAAAGTCATTAATT+TGG | + | chr1_3:71152582-71152601 | Msa0138300:intron | 30.0% | |
| GGGAAAAACTAAAAACCAAA+TGG | - | chr1_3:71152759-71152778 | None:intergenic | 30.0% | |
| GGAAAAAGCTCTTAAATGTA+TGG | + | chr1_3:71152844-71152863 | Msa0138300:CDS | 30.0% | |
| !! | ATGGGTTATATTCACTTTTG+TGG | + | chr1_3:71152863-71152882 | Msa0138300:CDS | 30.0% |
| GGATTAAACAGACCAATAAA+GGG | - | chr1_3:71152922-71152941 | None:intergenic | 30.0% | |
| TGGATTAAACAGACCAATAA+AGG | - | chr1_3:71152923-71152942 | None:intergenic | 30.0% | |
| TGATTATTCTCATGAACCTT+AGG | + | chr1_3:71152988-71153007 | Msa0138300:intron | 30.0% | |
| TTTATTCTTTATCCCTGAGT+TGG | + | chr1_3:71153040-71153059 | Msa0138300:CDS | 30.0% | |
| !! | CTGATTTTAATACCAACTCA+GGG | - | chr1_3:71153055-71153074 | None:intergenic | 30.0% |
| ! | CATATATGGTTAGCTATCAA+GGG | - | chr1_3:71153283-71153302 | None:intergenic | 30.0% |
| ! | TCATATATGGTTAGCTATCA+AGG | - | chr1_3:71153284-71153303 | None:intergenic | 30.0% |
| CGCAGCCAAAAAATTAATAA+TGG | - | chr1_3:71153351-71153370 | None:intergenic | 30.0% | |
| ! | GCTTTCTTCTTTTCTTCATA+AGG | + | chr1_3:71153518-71153537 | Msa0138300:CDS | 30.0% |
| ! | TCTTCTTTTCTTCATAAGGA+AGG | + | chr1_3:71153522-71153541 | Msa0138300:CDS | 30.0% |
| ! | ATTACGAAATTCCTTTTCAC+AGG | + | chr1_3:71153600-71153619 | Msa0138300:intron | 30.0% |
| ! | TTACGAAATTCCTTTTCACA+GGG | + | chr1_3:71153601-71153620 | Msa0138300:intron | 30.0% |
| ! | GACATTTTATGTTGGAACAA+AGG | + | chr1_3:71153650-71153669 | Msa0138300:CDS | 30.0% |
| ! | TGAATTTTCCATCGTTTGAA+TGG | + | chr1_3:71153691-71153710 | Msa0138300:intron | 30.0% |
| ATAGAAAACCATTCAAACGA+TGG | - | chr1_3:71153702-71153721 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTGCTTCATCTATG+TGG | - | chr1_3:71153778-71153797 | None:intergenic | 30.0% |
| ACATAGATGAAGCAAAACAA+AGG | + | chr1_3:71153777-71153796 | Msa0138300:CDS | 30.0% | |
| ! | CTGATACTTAACAGTTTGTT+TGG | + | chr1_3:71153855-71153874 | Msa0138300:three_prime_UTR | 30.0% |
| !!! | TCATTTTCCTTGTTTTCAGT+TGG | - | chr1_3:71154012-71154031 | None:intergenic | 30.0% |
| TAGGTTTGCATAATGAAACT+AGG | + | chr1_3:71154065-71154084 | Msa0138300:three_prime_UTR | 30.0% | |
| ! | TTTTCTTTGTAAGCAACGGA+CGG | - | chr1_3:71147731-71147750 | None:intergenic | 35.0% |
| GAAAAGAAGAAGGGCAAAAA+AGG | + | chr1_3:71147746-71147765 | Msa0138300:five_prime_UTR | 35.0% | |
| GCCATATCATCTACATAAAC+AGG | - | chr1_3:71148035-71148054 | None:intergenic | 35.0% | |
| GCAGAATCAATCATACATTG+AGG | - | chr1_3:71148170-71148189 | None:intergenic | 35.0% | |
| ! | TCTCAATGGAGAAATTTTCG+AGG | + | chr1_3:71148269-71148288 | Msa0138300:CDS | 35.0% |
| ! | AGTTGGTATGTGTAATGTGT+TGG | + | chr1_3:71148634-71148653 | Msa0138300:intron | 35.0% |
| ! | TTGAAAAACTGTGTTGACCA+TGG | + | chr1_3:71148881-71148900 | Msa0138300:intron | 35.0% |
| GTATTAATCTATGGGATCCA+TGG | - | chr1_3:71148901-71148920 | None:intergenic | 35.0% | |
| GAGATTTGTATATCCAATGG+TGG | + | chr1_3:71149058-71149077 | Msa0138300:intron | 35.0% | |
| GATTTGTATATCCAATGGTG+GGG | + | chr1_3:71149060-71149079 | Msa0138300:intron | 35.0% | |
| ATAGGTCTCATTCTATTGGT+TGG | + | chr1_3:71149090-71149109 | Msa0138300:intron | 35.0% | |
| TGAGGGAAGAGTGATAAATA+TGG | - | chr1_3:71149241-71149260 | None:intergenic | 35.0% | |
| ! | TAGTCTTACATGGTAACTGA+GGG | - | chr1_3:71149258-71149277 | None:intergenic | 35.0% |
| !! | TTAGTCTTACATGGTAACTG+AGG | - | chr1_3:71149259-71149278 | None:intergenic | 35.0% |
| ! | TATTTCTGCAGATGTTTGCA+CGG | + | chr1_3:71149284-71149303 | Msa0138300:intron | 35.0% |
| TGGCACATATGTTTCAACTT+TGG | + | chr1_3:71149526-71149545 | Msa0138300:CDS | 35.0% | |
| AATAGTTCAACCACCAAGAT+GGG | - | chr1_3:71149637-71149656 | None:intergenic | 35.0% | |
| CTTAATATGAATGCTGGTGA+TGG | - | chr1_3:71149672-71149691 | None:intergenic | 35.0% | |
| AAGTGAGGAATGATCAAGTT+TGG | - | chr1_3:71149705-71149724 | None:intergenic | 35.0% | |
| ! | TTCCTCACTTGATTTGAAAC+TGG | + | chr1_3:71149715-71149734 | Msa0138300:intron | 35.0% |
| AACCAGTTTCAAATCAAGTG+AGG | - | chr1_3:71149720-71149739 | None:intergenic | 35.0% | |
| TAATTAGGATACTTATGGGC+TGG | + | chr1_3:71149758-71149777 | Msa0138300:intron | 35.0% | |
| ! | GCTTTGGATTGGATTATCAT+TGG | + | chr1_3:71149924-71149943 | Msa0138300:CDS | 35.0% |
| ! | GTCTCTCTCTTAACTTGATA+TGG | + | chr1_3:71150035-71150054 | Msa0138300:intron | 35.0% |
| ! | CTCTTAACTTGATATGGTTG+TGG | + | chr1_3:71150041-71150060 | Msa0138300:intron | 35.0% |
| ! | TGAGATAGTGCTGAATGAAA+TGG | - | chr1_3:71150200-71150219 | None:intergenic | 35.0% |
| TAAGCCCAGCATTATATTGT+TGG | + | chr1_3:71150227-71150246 | Msa0138300:intron | 35.0% | |
| AAGCCCAGCATTATATTGTT+GGG | + | chr1_3:71150228-71150247 | Msa0138300:intron | 35.0% | |
| ATGGTTTCTATCAGTCATTC+AGG | - | chr1_3:71150436-71150455 | None:intergenic | 35.0% | |
| TTGAAGACAACTTAAGATGC+AGG | - | chr1_3:71150478-71150497 | None:intergenic | 35.0% | |
| CGTTGTCATATTTGCAAATC+AGG | + | chr1_3:71150671-71150690 | Msa0138300:CDS | 35.0% | |
| TATAGTTTCTATTCGGCATG+TGG | + | chr1_3:71150824-71150843 | Msa0138300:intron | 35.0% | |
| AGTCTACACATCAACAAGTT+CGG | + | chr1_3:71150893-71150912 | Msa0138300:CDS | 35.0% | |
| GTGCATACACCAAATAACAA+AGG | - | chr1_3:71150931-71150950 | None:intergenic | 35.0% | |
| TCATTACAGTTGTATGGTTG+TGG | + | chr1_3:71151049-71151068 | Msa0138300:intron | 35.0% | |
| !! | TAGTAGTTAATAGCGGATAG+AGG | + | chr1_3:71151255-71151274 | Msa0138300:intron | 35.0% |
| !!! | AAGTAGTCCTTTTTTGTCCT+GGG | + | chr1_3:71151864-71151883 | Msa0138300:intron | 35.0% |
| GGATAAAACACAATACCCAA+CGG | - | chr1_3:71152034-71152053 | None:intergenic | 35.0% | |
| ACTACAATGCCTTTGCTAAT+AGG | + | chr1_3:71152081-71152100 | Msa0138300:CDS | 35.0% | |
| ACGTGTTCATCATTGGATAT+GGG | + | chr1_3:71152235-71152254 | Msa0138300:CDS | 35.0% | |
| ! | ATGTATCCGTTAGTGTCATT+AGG | - | chr1_3:71152308-71152327 | None:intergenic | 35.0% |
| AGTATATCACTAGGTAGGTT+TGG | - | chr1_3:71152335-71152354 | None:intergenic | 35.0% | |
| ACCTACCTAGTGATATACTA+AGG | + | chr1_3:71152336-71152355 | Msa0138300:intron | 35.0% | |
| CTAAGCCTTAGTATATCACT+AGG | - | chr1_3:71152344-71152363 | None:intergenic | 35.0% | |
| AGTGATATACTAAGGCTTAG+TGG | + | chr1_3:71152344-71152363 | Msa0138300:intron | 35.0% | |
| AACGCTGTGGTAACATAAAT+TGG | - | chr1_3:71152405-71152424 | None:intergenic | 35.0% | |
| TTCAGGTCTTAAACTTCATG+TGG | + | chr1_3:71152465-71152484 | Msa0138300:intron | 35.0% | |
| ! | GGCTAAAGTTTTTACTGATC+TGG | + | chr1_3:71152486-71152505 | Msa0138300:CDS | 35.0% |
| AATAATTGCCACAACTTGGA+AGG | + | chr1_3:71152660-71152679 | Msa0138300:CDS | 35.0% | |
| !! | TGGAAGGCTTTTGGAAAAAT+TGG | + | chr1_3:71152676-71152695 | Msa0138300:CDS | 35.0% |
| !! | GCTGATTTTAATACCAACTC+AGG | - | chr1_3:71153056-71153075 | None:intergenic | 35.0% |
| ! | AATTAGGCTGAAAGCTCTTT+TGG | + | chr1_3:71153181-71153200 | Msa0138300:intron | 35.0% |
| ! | ATTAGGCTGAAAGCTCTTTT+GGG | + | chr1_3:71153182-71153201 | Msa0138300:intron | 35.0% |
| ! | GCGTGATTTCATATCTGTTT+TGG | + | chr1_3:71153368-71153387 | Msa0138300:intron | 35.0% |
| !!! | AACCTGGTTGGTTTTGTTAT+TGG | + | chr1_3:71153474-71153493 | Msa0138300:CDS | 35.0% |
| CAAGTAGTCATGCATTTATC+CGG | - | chr1_3:71153813-71153832 | None:intergenic | 35.0% | |
| TAAATGCATGACTACTTGTC+TGG | + | chr1_3:71153815-71153834 | Msa0138300:three_prime_UTR | 35.0% | |
| ! | ACTTAACAGTTTGTTTGGCT+TGG | + | chr1_3:71153860-71153879 | Msa0138300:three_prime_UTR | 35.0% |
| AAATTTGATGTGCAACGCAT+CGG | - | chr1_3:71153940-71153959 | None:intergenic | 35.0% | |
| ATGCGTTGCACATCAAATTT+GGG | + | chr1_3:71153940-71153959 | Msa0138300:three_prime_UTR | 35.0% | |
| ATCATTGCCAACTGAAAACA+AGG | + | chr1_3:71154002-71154021 | Msa0138300:three_prime_UTR | 35.0% | |
| TTTCTAAGCCACGAAAAAGA+GGG | - | chr1_3:71154104-71154123 | None:intergenic | 35.0% | |
| ! | TTTTCTAAGCCACGAAAAAG+AGG | - | chr1_3:71154105-71154124 | None:intergenic | 35.0% |
| !! | CTTTTTCGTGGCTTAGAAAA+TGG | + | chr1_3:71154105-71154124 | Msa0138300:three_prime_UTR | 35.0% |
| ACAGTAGATTGCGATGAACA+AGG | + | chr1_3:71147851-71147870 | Msa0138300:exon | 40.0% | |
| AAGAACTCTTTCTGCTTCCA+GGG | - | chr1_3:71147903-71147922 | None:intergenic | 40.0% | |
| AAAGAACTCTTTCTGCTTCC+AGG | - | chr1_3:71147904-71147923 | None:intergenic | 40.0% | |
| AGGATGTCTCAGATTCTCAA+TGG | + | chr1_3:71148255-71148274 | Msa0138300:intron | 40.0% | |
| CCAAAGACAAGTGTAAGAAC+AGG | - | chr1_3:71148302-71148321 | None:intergenic | 40.0% | |
| CCTGTTCTTACACTTGTCTT+TGG | + | chr1_3:71148299-71148318 | Msa0138300:CDS | 40.0% | |
| GAAGAAAGCCCTCATCAAAT+GGG | - | chr1_3:71148342-71148361 | None:intergenic | 40.0% | |
| TGAAGAAAGCCCTCATCAAA+TGG | - | chr1_3:71148343-71148362 | None:intergenic | 40.0% | |
| !!! | GTTTTGGGGACTGAGAAAAT+AGG | + | chr1_3:71149023-71149042 | Msa0138300:intron | 40.0% |
| ! | TCTCATTCTATTGGTTGGTC+AGG | + | chr1_3:71149095-71149114 | Msa0138300:intron | 40.0% |
| TATATTGCAGGCAACAATGG+AGG | + | chr1_3:71149473-71149492 | Msa0138300:intron | 40.0% | |
| !! | AGGTTTTTGGACAATTACCG+CGG | + | chr1_3:71149493-71149512 | Msa0138300:CDS | 40.0% |
| ! | TAACCTCTTTTTCCCCATCT+TGG | + | chr1_3:71149621-71149640 | Msa0138300:intron | 40.0% |
| ATAGTTCAACCACCAAGATG+GGG | - | chr1_3:71149636-71149655 | None:intergenic | 40.0% | |
| GAATAGTTCAACCACCAAGA+TGG | - | chr1_3:71149638-71149657 | None:intergenic | 40.0% | |
| ! | GTTTTGCGCATGATAAGCTT+TGG | + | chr1_3:71149908-71149927 | Msa0138300:CDS | 40.0% |
| !! | AGATTCTCATTTTGATCCGG+AGG | + | chr1_3:71149955-71149974 | Msa0138300:CDS | 40.0% |
| CCTTAAGACAGTAATACCTC+CGG | - | chr1_3:71149974-71149993 | None:intergenic | 40.0% | |
| TTAAGAGAGAGACCGTAGAA+TGG | - | chr1_3:71150028-71150047 | None:intergenic | 40.0% | |
| AAGCCATGATCATGATCAGA+GGG | - | chr1_3:71150090-71150109 | None:intergenic | 40.0% | |
| !! | ATGATCATGGCTTGCTTACT+GGG | + | chr1_3:71150097-71150116 | Msa0138300:intron | 40.0% |
| AGCCCAGCATTATATTGTTG+GGG | + | chr1_3:71150229-71150248 | Msa0138300:intron | 40.0% | |
| TGCCCCAACAATATAATGCT+GGG | - | chr1_3:71150234-71150253 | None:intergenic | 40.0% | |
| ATGCCCCAACAATATAATGC+TGG | - | chr1_3:71150235-71150254 | None:intergenic | 40.0% | |
| ! | ATTGTTAAGCAAAGTGTCCC+AGG | - | chr1_3:71150342-71150361 | None:intergenic | 40.0% |
| ACAATTATGTAAGACCAGGC+TGG | + | chr1_3:71150357-71150376 | Msa0138300:intron | 40.0% | |
| CACATGCTATCAAGCTTTAC+AGG | + | chr1_3:71150697-71150716 | Msa0138300:CDS | 40.0% | |
| GCTATCAAGCTTTACAGGTT+AGG | + | chr1_3:71150702-71150721 | Msa0138300:intron | 40.0% | |
| TATGCACCGCTTTATATTGC+CGG | + | chr1_3:71150944-71150963 | Msa0138300:CDS | 40.0% | |
| ATTGGACCGGCAATATAAAG+CGG | - | chr1_3:71150953-71150972 | None:intergenic | 40.0% | |
| !! | AAAGCGTTGAAGCTCACTAT+TGG | - | chr1_3:71150971-71150990 | None:intergenic | 40.0% |
| TGGTCCTTGTGAAACCTTTA+GGG | + | chr1_3:71151069-71151088 | Msa0138300:intron | 40.0% | |
| TAACCCCTAAAGGTTTCACA+AGG | - | chr1_3:71151076-71151095 | None:intergenic | 40.0% | |
| AAATAGCAGGATGAGGAATG+AGG | - | chr1_3:71151106-71151125 | None:intergenic | 40.0% | |
| TTTCGGAAAATAGCAGGATG+AGG | - | chr1_3:71151113-71151132 | None:intergenic | 40.0% | |
| ! | TATCCCGCTATAGCATTTTC+GGG | - | chr1_3:71151296-71151315 | None:intergenic | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+CGG | - | chr1_3:71151297-71151316 | None:intergenic | 40.0% |
| CAGAAACAGAGAAAGCAGAA+TGG | + | chr1_3:71151432-71151451 | Msa0138300:intron | 40.0% | |
| AGAGAAAGCAGAATGGAGTT+TGG | + | chr1_3:71151439-71151458 | Msa0138300:intron | 40.0% | |
| TAGAGGAAGATTTACAGCAG+AGG | + | chr1_3:71151567-71151586 | Msa0138300:intron | 40.0% | |
| !!! | GAAGTAGTCCTTTTTTGTCC+TGG | + | chr1_3:71151863-71151882 | Msa0138300:intron | 40.0% |
| AGAAACACCCAGGACAAAAA+AGG | - | chr1_3:71151874-71151893 | None:intergenic | 40.0% | |
| ACAATGCCTTTGCTAATAGG+TGG | + | chr1_3:71152084-71152103 | Msa0138300:intron | 40.0% | |
| CAATGCCTTTGCTAATAGGT+GGG | + | chr1_3:71152085-71152104 | Msa0138300:intron | 40.0% | |
| ! | CAATTTTATCCAGCGGTTTG+TGG | + | chr1_3:71152193-71152212 | Msa0138300:intron | 40.0% |
| GACGTGTTCATCATTGGATA+TGG | + | chr1_3:71152234-71152253 | Msa0138300:CDS | 40.0% | |
| CGTGTTCATCATTGGATATG+GGG | + | chr1_3:71152236-71152255 | Msa0138300:CDS | 40.0% | |
| GCCTTAGTATATCACTAGGT+AGG | - | chr1_3:71152340-71152359 | None:intergenic | 40.0% | |
| GATATACTAAGGCTTAGTGG+TGG | + | chr1_3:71152347-71152366 | Msa0138300:intron | 40.0% | |
| GGAATTGTGTTGTAGGTGAA+CGG | + | chr1_3:71152603-71152622 | Msa0138300:intron | 40.0% | |
| GAATTGTGTTGTAGGTGAAC+GGG | + | chr1_3:71152604-71152623 | Msa0138300:intron | 40.0% | |
| GGCATGCTTCCTTTAACAAA+TGG | + | chr1_3:71152697-71152716 | Msa0138300:CDS | 40.0% | |
| ATTTGACGGGGTAGAAATTC+AGG | + | chr1_3:71152793-71152812 | Msa0138300:intron | 40.0% | |
| AGGTATGTGTACATTCCTCT+TGG | + | chr1_3:71152813-71152832 | Msa0138300:intron | 40.0% | |
| GGTATGTGTACATTCCTCTT+GGG | + | chr1_3:71152814-71152833 | Msa0138300:intron | 40.0% | |
| GTATGTGTACATTCCTCTTG+GGG | + | chr1_3:71152815-71152834 | Msa0138300:CDS | 40.0% | |
| TATGTGTACATTCCTCTTGG+GGG | + | chr1_3:71152816-71152835 | Msa0138300:CDS | 40.0% | |
| !! | TATTCACTTTTGTGGCCATC+TGG | + | chr1_3:71152871-71152890 | Msa0138300:CDS | 40.0% |
| ACCTTAGGAAGCTTCTTTCA+TGG | + | chr1_3:71153003-71153022 | Msa0138300:intron | 40.0% | |
| CCTTAGGAAGCTTCTTTCAT+GGG | + | chr1_3:71153004-71153023 | Msa0138300:intron | 40.0% | |
| !! | ATCAGCCGCAAAAGCATTTA+AGG | + | chr1_3:71153070-71153089 | Msa0138300:CDS | 40.0% |
| ! | GTGATTCTAGCTGTCTAACA+TGG | + | chr1_3:71153145-71153164 | Msa0138300:intron | 40.0% |
| ! | TTAGGCTGAAAGCTCTTTTG+GGG | + | chr1_3:71153183-71153202 | Msa0138300:intron | 40.0% |
| ! | GAGCTGTGACTTTTGTTAAC+AGG | + | chr1_3:71153446-71153465 | Msa0138300:intron | 40.0% |
| ! | CTGTGACTTTTGTTAACAGG+TGG | + | chr1_3:71153449-71153468 | Msa0138300:intron | 40.0% |
| GTCCAATAACAAAACCAACC+AGG | - | chr1_3:71153479-71153498 | None:intergenic | 40.0% | |
| !!! | GGTTTTGTTATTGGACCAAG+CGG | + | chr1_3:71153483-71153502 | Msa0138300:CDS | 40.0% |
| AACATAAGCTGCAGATACAC+AGG | - | chr1_3:71153755-71153774 | None:intergenic | 40.0% | |
| TCATGCATTTATCCGGTTCA+GGG | - | chr1_3:71153806-71153825 | None:intergenic | 40.0% | |
| !! | TTTGGCTTGGAGATATCTGT+GGG | + | chr1_3:71153873-71153892 | Msa0138300:three_prime_UTR | 40.0% |
| ! | CGCATCGGCAATCTTTAAAA+TGG | - | chr1_3:71153925-71153944 | None:intergenic | 40.0% |
| GATGCGTTGCACATCAAATT+TGG | + | chr1_3:71153939-71153958 | Msa0138300:three_prime_UTR | 40.0% | |
| TTCTAAGCCACGAAAAAGAG+GGG | - | chr1_3:71154103-71154122 | None:intergenic | 40.0% | |
| AATCGCGAGAGAGAAAAGGA+GGG | - | chr1_3:71147824-71147843 | None:intergenic | 45.0% | |
| TAATCGCGAGAGAGAAAAGG+AGG | - | chr1_3:71147825-71147844 | None:intergenic | 45.0% | |
| CACTAATCGCGAGAGAGAAA+AGG | - | chr1_3:71147828-71147847 | None:intergenic | 45.0% | |
| ATGGTAGAAAGAGTTCACCC+TGG | + | chr1_3:71147883-71147902 | Msa0138300:CDS | 45.0% | |
| ACAACTATTCGGTTTACGCC+CGG | + | chr1_3:71148125-71148144 | Msa0138300:CDS | 45.0% | |
| TGATTAGGAATGAGCCATCC+CGG | - | chr1_3:71148147-71148166 | None:intergenic | 45.0% | |
| ACTTCTGGCCCATTTGATGA+GGG | + | chr1_3:71148331-71148350 | Msa0138300:CDS | 45.0% | |
| TGAGAGGAATGTCTGTTGTC+TGG | + | chr1_3:71148372-71148391 | Msa0138300:CDS | 45.0% | |
| GCCTACCTATCATATCTGCA+CGG | + | chr1_3:71148410-71148429 | Msa0138300:CDS | 45.0% | |
| TCCGTGCAGATATGATAGGT+AGG | - | chr1_3:71148414-71148433 | None:intergenic | 45.0% | |
| ATGCTCCGTGCAGATATGAT+AGG | - | chr1_3:71148418-71148437 | None:intergenic | 45.0% | |
| TATCATATCTGCACGGAGCA+TGG | + | chr1_3:71148417-71148436 | Msa0138300:CDS | 45.0% | |
| CTATGATACATCCCCACCAT+TGG | - | chr1_3:71149074-71149093 | None:intergenic | 45.0% | |
| ! | CAATGGTGGGGATGTATCAT+AGG | + | chr1_3:71149072-71149091 | Msa0138300:intron | 45.0% |
| ! | CAGGCAACAATGGAGGTTTT+TGG | + | chr1_3:71149480-71149499 | Msa0138300:intron | 45.0% |
| !! | TGAATGCTGGTGATGGATCA+CGG | - | chr1_3:71149665-71149684 | None:intergenic | 45.0% |
| !! | GCGCATGATAAGCTTTGGAT+TGG | + | chr1_3:71149913-71149932 | Msa0138300:CDS | 45.0% |
| !! | CCGGAGGTATTACTGTCTTA+AGG | + | chr1_3:71149971-71149990 | Msa0138300:intron | 45.0% |
| TCTCCCTCTGATCATGATCA+TGG | + | chr1_3:71150084-71150103 | Msa0138300:intron | 45.0% | |
| CAAGCCATGATCATGATCAG+AGG | - | chr1_3:71150091-71150110 | None:intergenic | 45.0% | |
| !! | CATGATCATGGCTTGCTTAC+TGG | + | chr1_3:71150096-71150115 | Msa0138300:intron | 45.0% |
| !! | GACTTCACTTTTCCCTTGGT+TGG | + | chr1_3:71150119-71150138 | Msa0138300:intron | 45.0% |
| !! | TCACTTTTCCCTTGGTTGGA+TGG | + | chr1_3:71150123-71150142 | Msa0138300:intron | 45.0% |
| !! | AATCAAGCAGTGCCACTTTG+AGG | - | chr1_3:71150301-71150320 | None:intergenic | 45.0% |
| GTTGAAGCTCACTATTGGAC+CGG | - | chr1_3:71150966-71150985 | None:intergenic | 45.0% | |
| GTGGTCCTTGTGAAACCTTT+AGG | + | chr1_3:71151068-71151087 | Msa0138300:intron | 45.0% | |
| GGTCCTTGTGAAACCTTTAG+GGG | + | chr1_3:71151070-71151089 | Msa0138300:intron | 45.0% | |
| AGGATGCACTTAACCCCTAA+AGG | - | chr1_3:71151086-71151105 | None:intergenic | 45.0% | |
| ! | ATCCCGCTATAGCATTTTCG+GGG | - | chr1_3:71151295-71151314 | None:intergenic | 45.0% |
| GAGCAAACACGACAAAGTAG+AGG | + | chr1_3:71151550-71151569 | Msa0138300:intron | 45.0% | |
| ACAGAACAGCAGAAAAGCAG+AGG | + | chr1_3:71151602-71151621 | Msa0138300:intron | 45.0% | |
| TAGTCAATAGCGGCCAATAG+CGG | - | chr1_3:71151803-71151822 | None:intergenic | 45.0% | |
| TAGCAATGCAAGAAACACCC+AGG | - | chr1_3:71151884-71151903 | None:intergenic | 45.0% | |
| GATGTGTCATGAGCTCAACA+AGG | - | chr1_3:71152055-71152074 | None:intergenic | 45.0% | |
| !! | GTGGAAGCACTTATCTCCTA+TGG | + | chr1_3:71152212-71152231 | Msa0138300:CDS | 45.0% |
| CCAATGATGAACACGTCCAT+AGG | - | chr1_3:71152231-71152250 | None:intergenic | 45.0% | |
| CCTATGGACGTGTTCATCAT+TGG | + | chr1_3:71152228-71152247 | Msa0138300:CDS | 45.0% | |
| CCTGAGCCTAATGACACTAA+CGG | + | chr1_3:71152299-71152318 | Msa0138300:intron | 45.0% | |
| ATACTAAGGCTTAGTGGTGG+CGG | + | chr1_3:71152350-71152369 | Msa0138300:intron | 45.0% | |
| !!! | TACTGATCTGGCGCTTTTTC+AGG | + | chr1_3:71152498-71152517 | Msa0138300:CDS | 45.0% |
| !!! | CTTTTTCAGGTTCTGGTCAC+TGG | + | chr1_3:71152511-71152530 | Msa0138300:CDS | 45.0% |
| TCCAAAAGCCTTCCAAGTTG+TGG | - | chr1_3:71152671-71152690 | None:intergenic | 45.0% | |
| ! | CCTCACGAGCCATTTGTTAA+AGG | - | chr1_3:71152709-71152728 | None:intergenic | 45.0% |
| CCTTTAACAAATGGCTCGTG+AGG | + | chr1_3:71152706-71152725 | Msa0138300:CDS | 45.0% | |
| CCACTCTAAATCATGCCAGA+TGG | - | chr1_3:71152889-71152908 | None:intergenic | 45.0% | |
| CCATCTGGCATGATTTAGAG+TGG | + | chr1_3:71152886-71152905 | Msa0138300:CDS | 45.0% | |
| GGTACGTATGCTCCCTTTAT+TGG | + | chr1_3:71152907-71152926 | Msa0138300:intron | 45.0% | |
| CCCATGAAAGAAGCTTCCTA+AGG | - | chr1_3:71153007-71153026 | None:intergenic | 45.0% | |
| AGTTACAATCACTTGCCTCG+TGG | + | chr1_3:71153243-71153262 | Msa0138300:CDS | 45.0% | |
| TTAGCTATCAAGGGCAACCA+AGG | - | chr1_3:71153274-71153293 | None:intergenic | 45.0% | |
| TTGTTAACAGGTGGCAAACC+TGG | + | chr1_3:71153458-71153477 | Msa0138300:intron | 45.0% | |
| TTGGACCAAGCGGTATTAAC+TGG | + | chr1_3:71153493-71153512 | Msa0138300:CDS | 45.0% | |
| AGCAACCAGTTAATACCGCT+TGG | - | chr1_3:71153501-71153520 | None:intergenic | 45.0% | |
| ATAAGCAAGCCTCCAAGTAC+AGG | - | chr1_3:71153630-71153649 | None:intergenic | 45.0% | |
| GTCATGCATTTATCCGGTTC+AGG | - | chr1_3:71153807-71153826 | None:intergenic | 45.0% | |
| ATGCATGACTACTTGTCTGG+TGG | + | chr1_3:71153818-71153837 | Msa0138300:three_prime_UTR | 45.0% | |
| ATGACTACTTGTCTGGTGGT+AGG | + | chr1_3:71153822-71153841 | Msa0138300:three_prime_UTR | 45.0% | |
| !! | GTTTGGCTTGGAGATATCTG+TGG | + | chr1_3:71153872-71153891 | Msa0138300:three_prime_UTR | 45.0% |
| ACGAAAAAGAGGGGAAAAGG+AGG | - | chr1_3:71154094-71154113 | None:intergenic | 45.0% | |
| !! | TCCTTTTCCCCTCTTTTTCG+TGG | + | chr1_3:71154093-71154112 | Msa0138300:three_prime_UTR | 45.0% |
| TATACCGCGGGAGAGTTGAA+GGG | - | chr1_3:71147976-71147995 | None:intergenic | 50.0% | |
| ATATACCGCGGGAGAGTTGA+AGG | - | chr1_3:71147977-71147996 | None:intergenic | 50.0% | |
| CAACTATTCGGTTTACGCCC+GGG | + | chr1_3:71148126-71148145 | Msa0138300:CDS | 50.0% | |
| GATTAGGAATGAGCCATCCC+GGG | - | chr1_3:71148146-71148165 | None:intergenic | 50.0% | |
| CACTTCTGGCCCATTTGATG+AGG | + | chr1_3:71148330-71148349 | Msa0138300:CDS | 50.0% | |
| TATCTGCACGGAGCATGGTA+TGG | + | chr1_3:71148422-71148441 | Msa0138300:intron | 50.0% | |
| ACAATTACCGCGGCAGCTTT+AGG | + | chr1_3:71149503-71149522 | Msa0138300:CDS | 50.0% | |
| CCACCAAGATGGGGAAAAAG+AGG | - | chr1_3:71149627-71149646 | None:intergenic | 50.0% | |
| ! | CCTCTTTTTCCCCATCTTGG+TGG | + | chr1_3:71149624-71149643 | Msa0138300:intron | 50.0% |
| !! | CTGGGACTTCACTTTTCCCT+TGG | + | chr1_3:71150115-71150134 | Msa0138300:intron | 50.0% |
| GGCTACTTCCATCCAACCAA+GGG | - | chr1_3:71150134-71150153 | None:intergenic | 50.0% | |
| AGGCTACTTCCATCCAACCA+AGG | - | chr1_3:71150135-71150154 | None:intergenic | 50.0% | |
| ! | CTTCAACGCTTTTGCTTCGC+AGG | + | chr1_3:71150979-71150998 | Msa0138300:CDS | 50.0% |
| !! | CGCTATAGCATTTTCGGGGT+CGG | - | chr1_3:71151291-71151310 | None:intergenic | 50.0% |
| CGACCCCGAAAATGCTATAG+CGG | + | chr1_3:71151289-71151308 | Msa0138300:intron | 50.0% | |
| GACCCCGAAAATGCTATAGC+GGG | + | chr1_3:71151290-71151309 | Msa0138300:intron | 50.0% | |
| TATCTCACACCGCAACGCTA+TGG | + | chr1_3:71151737-71151756 | Msa0138300:intron | 50.0% | |
| AAGCGCCCACCTATTAGCAA+AGG | - | chr1_3:71152093-71152112 | None:intergenic | 50.0% | |
| TAAGTGCTTCCACAAACCGC+TGG | - | chr1_3:71152205-71152224 | None:intergenic | 50.0% | |
| ! | CCGTTAGTGTCATTAGGCTC+AGG | - | chr1_3:71152302-71152321 | None:intergenic | 50.0% |
| !!! | TCTGGCGCTTTTTCAGGTTC+TGG | + | chr1_3:71152504-71152523 | Msa0138300:CDS | 50.0% |
| GTTGTAGGTGAACGGGATTG+AGG | + | chr1_3:71152611-71152630 | Msa0138300:intron | 50.0% | |
| ! | GCCACAACTTGGAAGGCTTT+TGG | + | chr1_3:71152667-71152686 | Msa0138300:CDS | 50.0% |
| ACATTCCTCTTGGGGGATCT+CGG | + | chr1_3:71152823-71152842 | Msa0138300:CDS | 50.0% | |
| ! | TTTTTCCGAGATCCCCCAAG+AGG | - | chr1_3:71152831-71152850 | None:intergenic | 50.0% |
| TAACAGGTGGCAAACCTGGT+TGG | + | chr1_3:71153462-71153481 | Msa0138300:intron | 50.0% | |
| AAACAAAGGTCGCCCTGAAC+CGG | + | chr1_3:71153791-71153810 | Msa0138300:exon | 50.0% | |
| GCCACGAAAAAGAGGGGAAA+AGG | - | chr1_3:71154097-71154116 | None:intergenic | 50.0% | |
| CTCGTCGTCGTCAATAGCGT+CGG | + | chr1_3:71147782-71147801 | Msa0138300:five_prime_UTR | 55.0% | |
| !! | TCGTCAATAGCGTCGGCAAC+AGG | + | chr1_3:71147789-71147808 | Msa0138300:five_prime_UTR | 55.0% |
| CGAGAGAGAAAAGGAGGGAG+AGG | - | chr1_3:71147819-71147838 | None:intergenic | 55.0% | |
| TATTCGGTTTACGCCCGGGA+TGG | + | chr1_3:71148130-71148149 | Msa0138300:CDS | 55.0% | |
| !! | ATTACCGCGGCAGCTTTAGG+TGG | + | chr1_3:71149506-71149525 | Msa0138300:CDS | 55.0% |
| ATGGAAGTAGCCTCGTCTCG+TGG | + | chr1_3:71150142-71150161 | Msa0138300:intron | 55.0% | |
| AGCGTTGCGGTGTGAGATAG+CGG | - | chr1_3:71151736-71151755 | None:intergenic | 55.0% | |
| CGCAACAAGCCATAGCGTTG+CGG | - | chr1_3:71151749-71151768 | None:intergenic | 55.0% | |
| GGAAGCTTCTTTCATGGGCG+TGG | + | chr1_3:71153009-71153028 | Msa0138300:intron | 55.0% | |
| ! | CGTGAACTCAGTGCTGTTGC+TGG | + | chr1_3:71153217-71153236 | Msa0138300:CDS | 55.0% |
| ! | CTTGCCTCGTGGTTTGTCCT+TGG | + | chr1_3:71153254-71153273 | Msa0138300:intron | 55.0% |
| GCAACCAAGGACAAACCACG+AGG | - | chr1_3:71153261-71153280 | None:intergenic | 55.0% | |
| GTACAGGCAGCCCTGTGAAA+AGG | - | chr1_3:71153614-71153633 | None:intergenic | 55.0% | |
| TTCACAGGGCTGCCTGTACT+TGG | + | chr1_3:71153615-71153634 | Msa0138300:intron | 55.0% | |
| TGTGCCACCTAAAGCTGCCG+CGG | - | chr1_3:71149513-71149532 | None:intergenic | 60.0% | |
| GCTCGTGCGATGGTCGATAC+CGG | - | chr1_3:71150170-71150189 | None:intergenic | 60.0% | |
| ! | TAGCGGATAGAGGCGCGTAG+CGG | + | chr1_3:71151265-71151284 | Msa0138300:intron | 60.0% |
| !! | TGGCTTGTTGCGTAGCGCTC+CGG | + | chr1_3:71151757-71151776 | Msa0138300:intron | 60.0% |
| ACAGGGCTGCCTGTACTTGG+AGG | + | chr1_3:71153618-71153637 | Msa0138300:intron | 60.0% | |
| CGCTCCCTTCAACTCTCCCG+CGG | + | chr1_3:71147969-71147988 | Msa0138300:CDS | 65.0% | |
| CGACCATCGCACGAGCAGAG+TGG | + | chr1_3:71150174-71150193 | Msa0138300:intron | 65.0% | |
| TGGCCACTCTGCTCGTGCGA+TGG | - | chr1_3:71150180-71150199 | None:intergenic | 65.0% | |
| GTAGCCTCGTCTCGTGGCGC+CGG | + | chr1_3:71150148-71150167 | Msa0138300:intron | 70.0% | |
| GATACCGGCGCCACGAGACG+AGG | - | chr1_3:71150155-71150174 | None:intergenic | 70.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | - | chr1_3:71151790-71151809 | None:intergenic | 75.0% | |
| AGCGGCCAATAGCGGCCGCG+CGG | - | chr1_3:71151795-71151814 | None:intergenic | 75.0% | |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | + | chr1_3:71151787-71151806 | Msa0138300:intron | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTGC+CGG | - | chr1_3:71151779-71151798 | None:intergenic | 85.0% |
| ! | CGGCACCGCACCGCACCGCG+CGG | + | chr1_3:71151777-71151796 | Msa0138300:intron | 85.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | - | chr1_3:71151785-71151804 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 71147722 | 71154266 | 71147722 | ID=Msa0138300;Name=Msa0138300 |
| chr1_3 | mRNA | 71147722 | 71154266 | 71147722 | ID=Msa0138300-mRNA-1;Parent=Msa0138300;Name=Msa0138300-mRNA-1;_AED=0.12;_eAED=0.12;_QI=142|1|1|1|0.66|0.78|19|458|533 |
| chr1_3 | exon | 71147722 | 71147990 | 71147722 | ID=Msa0138300-mRNA-1:exon:24699;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71148115 | 71148173 | 71148115 | ID=Msa0138300-mRNA-1:exon:24700;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71148257 | 71148438 | 71148257 | ID=Msa0138300-mRNA-1:exon:24701;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71148540 | 71148588 | 71148540 | ID=Msa0138300-mRNA-1:exon:24702;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71149295 | 71149398 | 71149295 | ID=Msa0138300-mRNA-1:exon:24703;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71149483 | 71149547 | 71149483 | ID=Msa0138300-mRNA-1:exon:24704;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71149906 | 71149976 | 71149906 | ID=Msa0138300-mRNA-1:exon:24705;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71150659 | 71150718 | 71150659 | ID=Msa0138300-mRNA-1:exon:24706;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71150887 | 71151000 | 71150887 | ID=Msa0138300-mRNA-1:exon:24707;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71151978 | 71152102 | 71151978 | ID=Msa0138300-mRNA-1:exon:24708;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71152206 | 71152257 | 71152206 | ID=Msa0138300-mRNA-1:exon:24709;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71152470 | 71152532 | 71152470 | ID=Msa0138300-mRNA-1:exon:24710;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71152618 | 71152727 | 71152618 | ID=Msa0138300-mRNA-1:exon:24711;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71152815 | 71152907 | 71152815 | ID=Msa0138300-mRNA-1:exon:24712;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71153010 | 71153091 | 71153010 | ID=Msa0138300-mRNA-1:exon:24713;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71153187 | 71153264 | 71153187 | ID=Msa0138300-mRNA-1:exon:24714;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71153468 | 71153543 | 71153468 | ID=Msa0138300-mRNA-1:exon:24715;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71153622 | 71153671 | 71153622 | ID=Msa0138300-mRNA-1:exon:24716;Parent=Msa0138300-mRNA-1 |
| chr1_3 | exon | 71153767 | 71154266 | 71153767 | ID=Msa0138300-mRNA-1:exon:24717;Parent=Msa0138300-mRNA-1 |
| chr1_3 | five_prime_UTR | 71147722 | 71147863 | 71147722 | ID=Msa0138300-mRNA-1:five_prime_utr;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71147864 | 71147990 | 71147864 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71148115 | 71148173 | 71148115 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71148257 | 71148438 | 71148257 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71148540 | 71148588 | 71148540 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71149295 | 71149398 | 71149295 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71149483 | 71149547 | 71149483 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71149906 | 71149976 | 71149906 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71150659 | 71150718 | 71150659 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71150887 | 71151000 | 71150887 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71151978 | 71152102 | 71151978 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71152206 | 71152257 | 71152206 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71152470 | 71152532 | 71152470 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71152618 | 71152727 | 71152618 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71152815 | 71152907 | 71152815 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71153010 | 71153091 | 71153010 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71153187 | 71153264 | 71153187 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71153468 | 71153543 | 71153468 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71153622 | 71153671 | 71153622 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | CDS | 71153767 | 71153808 | 71153767 | ID=Msa0138300-mRNA-1:cds;Parent=Msa0138300-mRNA-1 |
| chr1_3 | three_prime_UTR | 71153809 | 71154266 | 71153809 | ID=Msa0138300-mRNA-1:three_prime_utr;Parent=Msa0138300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
