Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138650 | XP_013466096.2 | 88.924 | 641 | 14 | 3 | 1 | 584 | 1 | 641 | 0.0 | 1160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138650 | sp|Q8RXN5|TYW1_ARATH | 67.344 | 640 | 137 | 7 | 4 | 577 | 5 | 638 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138650 | A0A396JJV0 | 88.924 | 641 | 14 | 3 | 1 | 584 | 1 | 641 | 0.0 | 1160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138650 | Msa0145760 | 0.831807 | 1.353831e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138650 | MtrunA17_Chr1g0155111 | 88.924 | 641 | 14 | 3 | 1 | 584 | 1 | 641 | 0.0 | 1160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138650 | AT1G75200.1 | 67.344 | 640 | 137 | 7 | 4 | 577 | 5 | 638 | 0.0 | 852 |
Find 163 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGGTTAGGGTTGGGGTTT+TGG | 0.092746 | 1_3:-71778333 | None:intergenic |
| TCCTGTTATTAGAGCAAATT+TGG | 0.158620 | 1_3:+71779017 | Msa0138650:CDS |
| GACCACTCTTTGGAGATTTC+TGG | 0.166707 | 1_3:+71784540 | Msa0138650:CDS |
| TTGCTAGCATAGTAGTATTT+TGG | 0.231265 | 1_3:+71785856 | Msa0138650:three_prime_UTR |
| GCAGAATTTACGATCTCTAT+TGG | 0.246263 | 1_3:-71780341 | None:intergenic |
| ATTTAAATTCAGGTGGCTTC+TGG | 0.249615 | 1_3:+71785375 | Msa0138650:intron |
| TTGCAGGGTTATAAGATTAT+TGG | 0.257743 | 1_3:+71779576 | Msa0138650:intron |
| TTTATCTCTGGATACATAAT+AGG | 0.262090 | 1_3:-71784284 | None:intergenic |
| ACCAAATTTGCTCTAATAAC+AGG | 0.278071 | 1_3:-71779018 | None:intergenic |
| ACACCATCCTGGGCCGTCTA+TGG | 0.292318 | 1_3:+71785432 | Msa0138650:CDS |
| AACCTCAAAACCTGGGTAAT+AGG | 0.319156 | 1_3:-71784395 | None:intergenic |
| AAGTGTAGATTTGCGGTATT+CGG | 0.326741 | 1_3:+71778613 | Msa0138650:CDS |
| TTTACGGAATTGAGAGTCAT+AGG | 0.364405 | 1_3:+71779676 | Msa0138650:CDS |
| CTTCCTCGAAGGTGCTTTAC+CGG | 0.369795 | 1_3:-71778935 | None:intergenic |
| CCCTTGATTTCAATGAAGTC+GGG | 0.372694 | 1_3:-71784958 | None:intergenic |
| ACCACTCTTTGGAGATTTCT+GGG | 0.373617 | 1_3:+71784541 | Msa0138650:CDS |
| CTTAAGAGAGTCCTTTGTTC+CGG | 0.374790 | 1_3:-71784507 | None:intergenic |
| ACTAAGAAGTTCAAAATTGA+TGG | 0.376599 | 1_3:+71785239 | Msa0138650:CDS |
| TGTTGATGATGGTGGTGATT+TGG | 0.380928 | 1_3:+71778813 | Msa0138650:CDS |
| AAGTCGAGCCGCAAAGAATC+AGG | 0.393504 | 1_3:+71785513 | Msa0138650:CDS |
| GCGAGGAGTGTGAGACGAGC+TGG | 0.394107 | 1_3:-71778232 | None:intergenic |
| ATCCAGGACAGTTGAGATAT+AGG | 0.397266 | 1_3:+71785475 | Msa0138650:CDS |
| GAGGCGGTTAGAGAGGGTTT+TGG | 0.398722 | 1_3:-71778386 | None:intergenic |
| TATTATAAACTCTTCAGTAT+TGG | 0.406516 | 1_3:+71784931 | Msa0138650:CDS |
| GTTGATCTTGAAGATATTGC+CGG | 0.412171 | 1_3:+71778916 | Msa0138650:CDS |
| ACTTCTAACCTGATTCTTTG+CGG | 0.414058 | 1_3:-71785521 | None:intergenic |
| TTGTGGATGAGTTGCACAAA+AGG | 0.421585 | 1_3:+71784312 | Msa0138650:CDS |
| TAGAGCAAATTTGGTGAAGC+AGG | 0.424165 | 1_3:+71779026 | Msa0138650:CDS |
| TGCATTTGTAACTAGAAAAG+TGG | 0.426329 | 1_3:-71784342 | None:intergenic |
| CTATGATAAATTTCATGATC+TGG | 0.430965 | 1_3:+71785283 | Msa0138650:CDS |
| GCAATCGATAGACCACTCTT+TGG | 0.431413 | 1_3:+71784530 | Msa0138650:CDS |
| GTTGCTGAAGCCTATTACCC+AGG | 0.436691 | 1_3:+71784385 | Msa0138650:CDS |
| GTTTAATCATATTTGTATGC+TGG | 0.437012 | 1_3:-71780370 | None:intergenic |
| CATTGTGCATTATCTCTTGT+TGG | 0.437204 | 1_3:+71784257 | Msa0138650:CDS |
| ACATGGCTGCCACACCATCC+TGG | 0.438997 | 1_3:+71785421 | Msa0138650:CDS |
| CGATTGGCTTGCGGAGAGTT+CGG | 0.440051 | 1_3:+71778558 | Msa0138650:CDS |
| GGATTTGTAGAAGAAGTAGA+AGG | 0.443145 | 1_3:-71778272 | None:intergenic |
| TCCACAAGTGTATTTATCTC+TGG | 0.443802 | 1_3:-71784296 | None:intergenic |
| CGGAACAAAGGACTCTCTTA+AGG | 0.444253 | 1_3:+71784508 | Msa0138650:CDS |
| AGTATAAATTCTTCGCCGAT+TGG | 0.444572 | 1_3:+71778542 | Msa0138650:CDS |
| AAACAAATGAAAGGAGTTCC+TGG | 0.444665 | 1_3:+71780389 | Msa0138650:CDS |
| CAAATCCAGTAGCGAAAAGT+TGG | 0.447385 | 1_3:+71780300 | Msa0138650:CDS |
| TTCCTATATCTCAACTGTCC+TGG | 0.455066 | 1_3:-71785477 | None:intergenic |
| TTATTTGCACATGCCAAGCT+AGG | 0.467055 | 1_3:-71780251 | None:intergenic |
| GAGAGTAATGGGAAGTTGAA+TGG | 0.471230 | 1_3:+71778976 | Msa0138650:CDS |
| TTGAAGAGAGGTAGATAAAG+TGG | 0.472489 | 1_3:+71785880 | Msa0138650:three_prime_UTR |
| TCCATCCTTTCACAAGGGTC+AGG | 0.473152 | 1_3:-71784888 | None:intergenic |
| TGCCGACGTGAAAGCTTTCT+CGG | 0.477548 | 1_3:+71785136 | Msa0138650:CDS |
| CTACGGTGAAGGAGAGTAAT+GGG | 0.482227 | 1_3:+71778965 | Msa0138650:CDS |
| ACCCGACTTCATTGAAATCA+AGG | 0.485531 | 1_3:+71784957 | Msa0138650:CDS |
| GCGGTATTCGGTGTCGGCAG+TGG | 0.490796 | 1_3:+71778625 | Msa0138650:CDS |
| CATGGAGGCAACCCCTAGCT+TGG | 0.491145 | 1_3:+71780238 | Msa0138650:CDS |
| GTAGAAGAAGTAGAAGGTTG+TGG | 0.494820 | 1_3:-71778266 | None:intergenic |
| GGTGAGAATTTCAATGCGGT+TGG | 0.495729 | 1_3:+71778655 | Msa0138650:CDS |
| GTTGAATGGAAAGAAAGAAA+TGG | 0.495731 | 1_3:+71778990 | Msa0138650:CDS |
| ATCAAGGGTGTTACATATTG+TGG | 0.497705 | 1_3:+71784973 | Msa0138650:CDS |
| ACCCTTGATTTCAATGAAGT+CGG | 0.497934 | 1_3:-71784959 | None:intergenic |
| CATGGCTGCCACACCATCCT+GGG | 0.498661 | 1_3:+71785422 | Msa0138650:CDS |
| GGTGTCGGCAGTGGAGGTTA+TGG | 0.500301 | 1_3:+71778634 | Msa0138650:CDS |
| TTCGAGGAAGCTGGTGGCTA+CGG | 0.500414 | 1_3:+71778948 | Msa0138650:CDS |
| AGAGTCTGATGAGGAGGAAG+AGG | 0.501593 | 1_3:+71778879 | Msa0138650:CDS |
| CAGCATTCCATCCTTTCACA+AGG | 0.501696 | 1_3:-71784894 | None:intergenic |
| GAAAAGTTGGGTGTGGGAGA+TGG | 0.507932 | 1_3:+71780313 | Msa0138650:CDS |
| GAATTTCAATGCGGTTGGTA+AGG | 0.508915 | 1_3:+71778660 | Msa0138650:CDS |
| TATTTGCACATGCCAAGCTA+GGG | 0.514611 | 1_3:-71780250 | None:intergenic |
| TCACTCGTGTTGTGTCCTCT+TGG | 0.516638 | 1_3:+71785211 | Msa0138650:CDS |
| GGATTCCTTGACTGCTCTGA+AGG | 0.516788 | 1_3:+71784840 | Msa0138650:intron |
| TGAGGAGGAAGAGGCGGAGT+CGG | 0.518460 | 1_3:+71778888 | Msa0138650:CDS |
| GGTAACGAGATGATTCCGTT+GGG | 0.519802 | 1_3:+71778712 | Msa0138650:CDS |
| TTTGTCGAAGTGTAGATTTG+CGG | 0.520004 | 1_3:+71778606 | Msa0138650:CDS |
| GAGGAAGGTGGATTTGATCC+AGG | 0.523501 | 1_3:+71785459 | Msa0138650:CDS |
| AGGTGAGGAAACGGTGGAGG+CGG | 0.524499 | 1_3:-71778402 | None:intergenic |
| CAGTAGCGAAAAGTTGGGTG+TGG | 0.532702 | 1_3:+71780306 | Msa0138650:CDS |
| CGAGCTGGGACTGATGAGAA+TGG | 0.534353 | 1_3:-71778217 | None:intergenic |
| TAAAGCACCTTCGAGGAAGC+TGG | 0.534689 | 1_3:+71778939 | Msa0138650:CDS |
| CTCAGCTCCATAGACGGCCC+AGG | 0.535554 | 1_3:-71785439 | None:intergenic |
| AAGTCACAGCTTCGAGGTCG+AGG | 0.539284 | 1_3:+71779633 | Msa0138650:CDS |
| CGAGGAGTGTGAGACGAGCT+GGG | 0.539403 | 1_3:-71778231 | None:intergenic |
| TTGATGGCCAGTGGTATACA+TGG | 0.541192 | 1_3:+71785255 | Msa0138650:CDS |
| TTGAGGTGAGGAAACGGTGG+AGG | 0.544628 | 1_3:-71778405 | None:intergenic |
| ATTCTTCGCCGATTGGCTTG+CGG | 0.545441 | 1_3:+71778549 | Msa0138650:CDS |
| CTCTGTCTCTGAAAAGCCAA+GGG | 0.546175 | 1_3:+71785162 | Msa0138650:CDS |
| TGTTGGTTTGAGAAATGAAG+AGG | 0.549143 | 1_3:-71778360 | None:intergenic |
| GCTTTCACGTCGGCATGCCA+AGG | 0.550330 | 1_3:-71785128 | None:intergenic |
| GAAGCTGGTGGCTACGGTGA+AGG | 0.550823 | 1_3:+71778954 | Msa0138650:CDS |
| GTGAAACGGATGAAGGCGTT+GGG | 0.552770 | 1_3:+71778688 | Msa0138650:CDS |
| GCCTGACCCTTGTGAAAGGA+TGG | 0.553096 | 1_3:+71784887 | Msa0138650:CDS |
| TGAAGAAGAGTCTGATGAGG+AGG | 0.553756 | 1_3:+71778873 | Msa0138650:CDS |
| CGAACTCTCCGCAAGCCAAT+CGG | 0.555358 | 1_3:-71778557 | None:intergenic |
| ACGCAATGCTATTTATTGCA+AGG | 0.558732 | 1_3:-71785811 | None:intergenic |
| TGGACTAAGTCACAGCTTCG+AGG | 0.559406 | 1_3:+71779627 | Msa0138650:CDS |
| AGGCAACTTCATACTCCCCT+TGG | 0.560657 | 1_3:-71785178 | None:intergenic |
| AACGGTGGAGGCGGTTAGAG+AGG | 0.565434 | 1_3:-71778393 | None:intergenic |
| GTCTGATGAGGAGGAAGAGG+CGG | 0.567189 | 1_3:+71778882 | Msa0138650:CDS |
| TGCTACATCAAAATTAACAA+TGG | 0.568819 | 1_3:+71785097 | Msa0138650:CDS |
| GGAGATTGTGAAACGGATGA+AGG | 0.571123 | 1_3:+71778681 | Msa0138650:CDS |
| TAACAATGGAAAATGTCCCT+TGG | 0.571608 | 1_3:+71785111 | Msa0138650:CDS |
| AGTCTATCCATGTATACCAC+TGG | 0.572314 | 1_3:-71785262 | None:intergenic |
| GCTCTGTCTCTGAAAAGCCA+AGG | 0.575623 | 1_3:+71785161 | Msa0138650:CDS |
| TCCAGAGATAAATACACTTG+TGG | 0.576447 | 1_3:+71784295 | Msa0138650:CDS |
| TCAGGCGGTATACAGTGCGC+TGG | 0.577014 | 1_3:-71784870 | None:intergenic |
| ACGGTGGAGGCGGTTAGAGA+GGG | 0.577423 | 1_3:-71778392 | None:intergenic |
| AGATTTGCGGTATTCGGTGT+CGG | 0.577679 | 1_3:+71778619 | Msa0138650:CDS |
| GCTACGGTGAAGGAGAGTAA+TGG | 0.579239 | 1_3:+71778964 | Msa0138650:CDS |
| TGGTAACGAGATGATTCCGT+TGG | 0.580232 | 1_3:+71778711 | Msa0138650:CDS |
| GTATTCGGTGTCGGCAGTGG+AGG | 0.580600 | 1_3:+71778628 | Msa0138650:CDS |
| GCCGTCTATGGAGCTGAGGA+AGG | 0.583318 | 1_3:+71785444 | Msa0138650:CDS |
| TGGATGAGTTGCACAAAAGG+AGG | 0.584833 | 1_3:+71784315 | Msa0138650:CDS |
| AAATCCAGTAGCGAAAAGTT+GGG | 0.586529 | 1_3:+71780301 | Msa0138650:CDS |
| TTGCCGGTAAAGCACCTTCG+AGG | 0.590223 | 1_3:+71778932 | Msa0138650:CDS |
| AAGAATTTATACTCCGGCGG+TGG | 0.594684 | 1_3:-71778532 | None:intergenic |
| CAGTGTAGATGCCGGAACAA+AGG | 0.595194 | 1_3:+71784496 | Msa0138650:CDS |
| AATATGATTAAACAAATGAA+AGG | 0.595549 | 1_3:+71780380 | Msa0138650:CDS |
| GTGGTGTCAAGATTTGTAGA+TGG | 0.595777 | 1_3:+71779607 | Msa0138650:CDS |
| GAAGAAGTAGAAGGTTGTGG+CGG | 0.596045 | 1_3:-71778263 | None:intergenic |
| TGATGAAGAAGAGTCTGATG+AGG | 0.598927 | 1_3:+71778870 | Msa0138650:CDS |
| TGTGAAACGGATGAAGGCGT+TGG | 0.600791 | 1_3:+71778687 | Msa0138650:CDS |
| ACACGAGTGAACATGCTCAC+AGG | 0.600820 | 1_3:-71785198 | None:intergenic |
| ATCCTTTCACAAGGGTCAGG+CGG | 0.604119 | 1_3:-71784885 | None:intergenic |
| GTCTATGGAGCTGAGGAAGG+TGG | 0.604936 | 1_3:+71785447 | Msa0138650:CDS |
| CTTTCACGTCGGCATGCCAA+GGG | 0.607070 | 1_3:-71785127 | None:intergenic |
| TTATATGTCAGTGTAGATGC+CGG | 0.607545 | 1_3:+71784488 | Msa0138650:CDS |
| CCCGACTTCATTGAAATCAA+GGG | 0.615860 | 1_3:+71784958 | Msa0138650:CDS |
| ACCTCGGAGCGATTAACTGA+AGG | 0.618092 | 1_3:+71784221 | Msa0138650:CDS |
| GCTCCATAGACGGCCCAGGA+TGG | 0.619796 | 1_3:-71785435 | None:intergenic |
| TCCCAGAAATCTCCAAAGAG+TGG | 0.620464 | 1_3:-71784542 | None:intergenic |
| GGGGAAGGAGATGTTGATGG+TGG | 0.624176 | 1_3:+71778733 | Msa0138650:CDS |
| ATACTGAAAGGTGTTGATGA+TGG | 0.624454 | 1_3:+71778802 | Msa0138650:intron |
| AGTAGCGAAAAGTTGGGTGT+GGG | 0.624662 | 1_3:+71780307 | Msa0138650:CDS |
| CTGGGCCGTCTATGGAGCTG+AGG | 0.625153 | 1_3:+71785440 | Msa0138650:CDS |
| TAACGAGATGATTCCGTTGG+GGG | 0.625747 | 1_3:+71778714 | Msa0138650:CDS |
| TTGTGGCGGAGAAGAGAGCG+AGG | 0.627299 | 1_3:-71778249 | None:intergenic |
| GTAGCCACCAGCTTCCTCGA+AGG | 0.629332 | 1_3:-71778946 | None:intergenic |
| AAGATTATTGGTTCACACAG+TGG | 0.629945 | 1_3:+71779588 | Msa0138650:CDS |
| ACCTTCCTCAGCTCCATAGA+CGG | 0.630071 | 1_3:-71785445 | None:intergenic |
| TTGGTAAGGAGATTGTGAAA+CGG | 0.632862 | 1_3:+71778674 | Msa0138650:CDS |
| ATAGACGGCCCAGGATGGTG+TGG | 0.635119 | 1_3:-71785430 | None:intergenic |
| TTGGCTTGCGGAGAGTTCGG+AGG | 0.639532 | 1_3:+71778561 | Msa0138650:CDS |
| TACCGCCTGACCCTTGTGAA+AGG | 0.639713 | 1_3:+71784883 | Msa0138650:CDS |
| ATTTGCACATGCCAAGCTAG+GGG | 0.639964 | 1_3:-71780249 | None:intergenic |
| AGTTCAAAATTGATGGCCAG+TGG | 0.640034 | 1_3:+71785246 | Msa0138650:CDS |
| CTGAAAGGTGTTGATGATGG+TGG | 0.640774 | 1_3:+71778805 | Msa0138650:intron |
| TGATTTGGAGAATGCTGAGG+AGG | 0.642559 | 1_3:+71778828 | Msa0138650:CDS |
| TTATGAGTGAAATAGGTGCA+TGG | 0.642687 | 1_3:+71780220 | Msa0138650:intron |
| AGAGATAATGCACAATGCCG+TGG | 0.654133 | 1_3:-71784251 | None:intergenic |
| GTAACGAGATGATTCCGTTG+GGG | 0.654757 | 1_3:+71778713 | Msa0138650:CDS |
| AGCATTCCATCCTTTCACAA+GGG | 0.657631 | 1_3:-71784893 | None:intergenic |
| GGAAGACGGAAAACCACCGC+CGG | 0.657646 | 1_3:+71778519 | Msa0138650:intron |
| GAGAATGCTGAGGAGGAAAG+CGG | 0.660819 | 1_3:+71778835 | Msa0138650:CDS |
| TCACAGCTTCGAGGTCGAGG+TGG | 0.662705 | 1_3:+71779636 | Msa0138650:CDS |
| AGCACCTTCGAGGAAGCTGG+TGG | 0.676170 | 1_3:+71778942 | Msa0138650:CDS |
| CTCCGAGAAAGCTTTCACGT+CGG | 0.679985 | 1_3:-71785138 | None:intergenic |
| TCGGCGAAGAATTTATACTC+CGG | 0.685809 | 1_3:-71778538 | None:intergenic |
| GCGAAGAATTTATACTCCGG+CGG | 0.686331 | 1_3:-71778535 | None:intergenic |
| TAACTGAAGGCATGACACCA+CGG | 0.686690 | 1_3:+71784234 | Msa0138650:CDS |
| AAACGGATGAAGGCGTTGGG+TGG | 0.695210 | 1_3:+71778691 | Msa0138650:CDS |
| TGGGACTGATGAGAATGGCA+TGG | 0.701260 | 1_3:-71778212 | None:intergenic |
| TGGTGATTTGGAGAATGCTG+AGG | 0.702453 | 1_3:+71778825 | Msa0138650:CDS |
| GCCTTCAGTTAATCGCTCCG+AGG | 0.710873 | 1_3:-71784222 | None:intergenic |
| CGACGTGAAAGCTTTCTCGG+AGG | 0.740056 | 1_3:+71785139 | Msa0138650:CDS |
| TCTGTCTCTGAAAAGCCAAG+GGG | 0.741241 | 1_3:+71785163 | Msa0138650:CDS |
| TGAGTGAAATAGGTGCATGG+AGG | 0.759000 | 1_3:+71780223 | Msa0138650:intron |
| TTATGGTGAGAATTTCAATG+CGG | 0.771681 | 1_3:+71778651 | Msa0138650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAATTTTTAATTAAAA+AGG | + | chr1_3:71781808-71781827 | Msa0138650:intron | 0.0% |
| !!! | TTTTTTTTTGCTTATAATTT+GGG | - | chr1_3:71782365-71782384 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGCTTATAATT+TGG | - | chr1_3:71782366-71782385 | None:intergenic | 10.0% |
| !! | TTAAAAAAACAAGATTAAAT+AGG | + | chr1_3:71782578-71782597 | Msa0138650:intron | 10.0% |
| !!! | ATTTTTAATATATTTGTTGT+TGG | + | chr1_3:71782775-71782794 | Msa0138650:intron | 10.0% |
| !!! | AGAAAATATTTTTTTTTATG+GGG | + | chr1_3:71783813-71783832 | Msa0138650:intron | 10.0% |
| !! | AATATGATTAAACAAATGAA+AGG | + | chr1_3:71780380-71780399 | Msa0138650:CDS | 15.0% |
| !! | AAAGAAAATATAAAATTACC+AGG | - | chr1_3:71780410-71780429 | None:intergenic | 15.0% |
| !! | TGATGAATATAATCAAATAA+AGG | - | chr1_3:71780704-71780723 | None:intergenic | 15.0% |
| !! | AAAACTAAAACATAAGAATT+TGG | + | chr1_3:71782401-71782420 | Msa0138650:intron | 15.0% |
| !! | GTTTATTCTCATAAAATTAA+AGG | - | chr1_3:71782531-71782550 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTGCTTATATTA+TGG | + | chr1_3:71782646-71782665 | Msa0138650:intron | 15.0% |
| !!! | GTTTTTTTTGCTTATATTAT+GGG | + | chr1_3:71782647-71782666 | Msa0138650:intron | 15.0% |
| !! | TTTAGGTAAACAATAATTAT+TGG | + | chr1_3:71782938-71782957 | Msa0138650:intron | 15.0% |
| !!! | GAATAATAAGAAAATGTTTT+TGG | + | chr1_3:71783769-71783788 | Msa0138650:intron | 15.0% |
| !!! | CATATAATTAGTTTCAAAAT+TGG | + | chr1_3:71784172-71784191 | Msa0138650:intron | 15.0% |
| !! | TTTATCATCAATTTAAATTC+AGG | + | chr1_3:71785365-71785384 | Msa0138650:intron | 15.0% |
| !!! | TTAAAATATTATCGATTTGC+AGG | + | chr1_3:71779560-71779579 | Msa0138650:intron | 20.0% |
| !!! | TAAAATATTATCGATTTGCA+GGG | + | chr1_3:71779561-71779580 | Msa0138650:intron | 20.0% |
| !! | AATAAGTTTGTAAAGTAATC+AGG | + | chr1_3:71779956-71779975 | Msa0138650:intron | 20.0% |
| !!! | GGTTTTAGTAAGTATTTTTT+TGG | + | chr1_3:71780116-71780135 | Msa0138650:intron | 20.0% |
| !! | TTTAAGGGAAAAATAAATGA+GGG | + | chr1_3:71780611-71780630 | Msa0138650:intron | 20.0% |
| !! | ATAAATGATGATCTCATAAT+AGG | - | chr1_3:71780681-71780700 | None:intergenic | 20.0% |
| !!! | ACAAGATATTTTTTTTCAAC+TGG | - | chr1_3:71780748-71780767 | None:intergenic | 20.0% |
| !!! | TTTTTGATGCAAATCAAAAT+AGG | - | chr1_3:71781666-71781685 | Msa0138660:CDS | 20.0% |
| !!! | TTCTTTGGAAAAAGTTTTAT+AGG | + | chr1_3:71782440-71782459 | Msa0138650:intron | 20.0% |
| !!! | GATGTAAAAACAATTTTCAT+TGG | + | chr1_3:71782465-71782484 | Msa0138650:intron | 20.0% |
| !!! | AAAACAATTTTCATTGGTTA+TGG | + | chr1_3:71782471-71782490 | Msa0138650:intron | 20.0% |
| !!! | GAATAAACAAAAGTTTTTCT+TGG | + | chr1_3:71782543-71782562 | Msa0138650:intron | 20.0% |
| !! | AAAATGCTCAAAATTATTTG+AGG | - | chr1_3:71782760-71782779 | None:intergenic | 20.0% |
| !!! | TGTTCTTCAATTAATGTTTT+AGG | + | chr1_3:71782921-71782940 | Msa0138650:intron | 20.0% |
| !!! | TAAACCATTGACATTTTATT+TGG | - | chr1_3:71782986-71783005 | None:intergenic | 20.0% |
| !! | AAATAAAATGTCAATGGTTT+AGG | + | chr1_3:71782985-71783004 | Msa0138650:intron | 20.0% |
| !! | ATTGAAAACAAAAAGAAACA+AGG | - | chr1_3:71783697-71783716 | None:intergenic | 20.0% |
| !! | GGAAAACGATATTATAAAAT+GGG | - | chr1_3:71784035-71784054 | None:intergenic | 20.0% |
| !! | TGGAAAACGATATTATAAAA+TGG | - | chr1_3:71784036-71784055 | None:intergenic | 20.0% |
| !!! | TATAATATCGTTTTCCATAT+TGG | + | chr1_3:71784039-71784058 | Msa0138650:intron | 20.0% |
| !! | TATCAGTCAAAATGATATAA+CGG | - | chr1_3:71784116-71784135 | None:intergenic | 20.0% |
| !!! | ATTTTATAATTTGAACATGC+TGG | + | chr1_3:71784424-71784443 | Msa0138650:intron | 20.0% |
| !! | TATTATAAACTCTTCAGTAT+TGG | + | chr1_3:71784931-71784950 | Msa0138650:CDS | 20.0% |
| !! | TACACAATAAAGAAATGAAA+GGG | - | chr1_3:71785576-71785595 | None:intergenic | 20.0% |
| !! | TTACACAATAAAGAAATGAA+AGG | - | chr1_3:71785577-71785596 | None:intergenic | 20.0% |
| !! | TTTCTTTATTGTGTAACTAT+AGG | + | chr1_3:71785581-71785600 | Msa0138650:intron | 20.0% |
| !! | GTATTACAACATATTTCAAT+AGG | + | chr1_3:71785603-71785622 | Msa0138650:intron | 20.0% |
| !! | ATATGCAGTTTTTGTCATAT+TGG | + | chr1_3:71779373-71779392 | Msa0138650:intron | 25.0% |
| !! | TATGCAGTTTTTGTCATATT+GGG | + | chr1_3:71779374-71779393 | Msa0138650:intron | 25.0% |
| ! | CTTGATAAGAGTTTATATAG+AGG | + | chr1_3:71779431-71779450 | Msa0138650:intron | 25.0% |
| ! | AATTGACATGTTGAAATTTG+GGG | - | chr1_3:71779502-71779521 | None:intergenic | 25.0% |
| ! | CAATTGACATGTTGAAATTT+GGG | - | chr1_3:71779503-71779522 | None:intergenic | 25.0% |
| ! | TCAATTGACATGTTGAAATT+TGG | - | chr1_3:71779504-71779523 | None:intergenic | 25.0% |
| !! | TGAACTTAAGTAATTTGTAG+AGG | - | chr1_3:71779719-71779738 | None:intergenic | 25.0% |
| ! | TAAATAAGGTAATGAATTGC+AGG | - | chr1_3:71779825-71779844 | None:intergenic | 25.0% |
| !!! | GTTTTTAAGTAACTTTGTGT+TGG | + | chr1_3:71780006-71780025 | Msa0138650:intron | 25.0% |
| ! | AAATGAATATATGATAGCTG+AGG | - | chr1_3:71780191-71780210 | None:intergenic | 25.0% |
| !! | TCAACTTTTATGAGTGAAAT+AGG | + | chr1_3:71780213-71780232 | Msa0138650:intron | 25.0% |
| ! | GTTTAATCATATTTGTATGC+TGG | - | chr1_3:71780373-71780392 | None:intergenic | 25.0% |
| ! | GTTTAAGGGAAAAATAAATG+AGG | + | chr1_3:71780610-71780629 | Msa0138650:intron | 25.0% |
| !!! | TTTTTCAACTGGAGTATTTA+GGG | - | chr1_3:71780737-71780756 | None:intergenic | 25.0% |
| !!! | TTTTTTCAACTGGAGTATTT+AGG | - | chr1_3:71780738-71780757 | None:intergenic | 25.0% |
| !! | AGAACAGTAGCAATTTTTAA+TGG | + | chr1_3:71780966-71780985 | Msa0138650:intron | 25.0% |
| ! | TGAAAAACATAGATGTTGTT+GGG | - | chr1_3:71781115-71781134 | None:intergenic | 25.0% |
| ! | ATGAAAAACATAGATGTTGT+TGG | - | chr1_3:71781116-71781135 | None:intergenic | 25.0% |
| !! | TTTTCATTTCAAACTTGAAG+TGG | + | chr1_3:71781129-71781148 | Msa0138650:intron | 25.0% |
| ! | TTTCATTTCAAACTTGAAGT+GGG | + | chr1_3:71781130-71781149 | Msa0138650:intron | 25.0% |
| ! | ACATTTCACATTACTGAAAA+CGG | - | chr1_3:71781401-71781420 | None:intergenic | 25.0% |
| ! | AAAAGGTGAACAGAAAATTT+CGG | - | chr1_3:71781511-71781530 | None:intergenic | 25.0% |
| ! | AAAAGCTGATCAGATAATTT+CGG | + | chr1_3:71781945-71781964 | Msa0138650:intron | 25.0% |
| !! | ATTAATATTAGTTCTCAACC+TGG | + | chr1_3:71781986-71782005 | Msa0138650:intron | 25.0% |
| !!! | ATATAAAGACTCTAAAGTTG+TGG | - | chr1_3:71782124-71782143 | Msa0138660:CDS | 25.0% |
| !!! | GTATAGTTTTGTGTTTTCTT+TGG | + | chr1_3:71782425-71782444 | Msa0138650:intron | 25.0% |
| !! | TGTCCTTTTTGCTTATATTT+TGG | + | chr1_3:71782610-71782629 | Msa0138650:intron | 25.0% |
| !! | GTCCTTTTTGCTTATATTTT+GGG | + | chr1_3:71782611-71782630 | Msa0138650:intron | 25.0% |
| !! | TTTTTGCTTATATTATGGGA+CGG | + | chr1_3:71782651-71782670 | Msa0138650:intron | 25.0% |
| ! | TTTCAATAAGGGAATAACAA+TGG | - | chr1_3:71782821-71782840 | None:intergenic | 25.0% |
| ! | TACAACAATTGAGATTTCTT+TGG | - | chr1_3:71783022-71783041 | None:intergenic | 25.0% |
| ! | GAATCTATTTAAGTACTTTG+TGG | - | chr1_3:71783262-71783281 | None:intergenic | 25.0% |
| !!! | ACAGCATCGTTTTAATTAAA+CGG | - | chr1_3:71783604-71783623 | None:intergenic | 25.0% |
| ! | AAAAAGAAACAAGGAAATGT+TGG | - | chr1_3:71783688-71783707 | None:intergenic | 25.0% |
| !!! | TATATCATTTTGACTGATAC+TGG | + | chr1_3:71784117-71784136 | Msa0138650:intron | 25.0% |
| !!! | ATATCATTTTGACTGATACT+GGG | + | chr1_3:71784118-71784137 | Msa0138650:intron | 25.0% |
| ! | GAAACTAATTATATGCAGAA+CGG | - | chr1_3:71784167-71784186 | None:intergenic | 25.0% |
| ! | TTTATCTCTGGATACATAAT+AGG | - | chr1_3:71784287-71784306 | None:intergenic | 25.0% |
| !! | TTCAGCAACTTAATTTTATC+TGG | - | chr1_3:71784374-71784393 | None:intergenic | 25.0% |
| ! | GCAAACAAGAATATTAAGTT+TGG | - | chr1_3:71784459-71784478 | None:intergenic | 25.0% |
| !! | AGAGTTTAGTTCATATATCA+TGG | + | chr1_3:71784697-71784716 | Msa0138650:intron | 25.0% |
| !!! | TATTTTGATAACTATTTGCC+AGG | + | chr1_3:71784819-71784838 | Msa0138650:intron | 25.0% |
| !! | TTTTCAATCAAGAATTTAGC+TGG | - | chr1_3:71785043-71785062 | None:intergenic | 25.0% |
| ! | TGCTACATCAAAATTAACAA+TGG | + | chr1_3:71785097-71785116 | Msa0138650:CDS | 25.0% |
| ! | ACTAAGAAGTTCAAAATTGA+TGG | + | chr1_3:71785239-71785258 | Msa0138650:CDS | 25.0% |
| ! | CTATGATAAATTTCATGATC+TGG | + | chr1_3:71785283-71785302 | Msa0138650:CDS | 25.0% |
| ! | TGTTTATTTCCCTATTACTT+TGG | + | chr1_3:71785310-71785329 | Msa0138650:intron | 25.0% |
| ! | AAATTCAGTCCAAAGTAATA+GGG | - | chr1_3:71785322-71785341 | None:intergenic | 25.0% |
| ! | ATCATCAATTTAAATTCAGG+TGG | + | chr1_3:71785368-71785387 | Msa0138650:intron | 25.0% |
| ! | ACACAATAAAGAAATGAAAG+GGG | - | chr1_3:71785575-71785594 | None:intergenic | 25.0% |
| !! | TAATACAATGCTTTAGACAT+AGG | + | chr1_3:71785635-71785654 | Msa0138650:intron | 25.0% |
| ! | GAGAAATGAAGAGGATTTTA+GGG | - | chr1_3:71778354-71778373 | None:intergenic | 30.0% |
| ! | TGAGAAATGAAGAGGATTTT+AGG | - | chr1_3:71778355-71778374 | None:intergenic | 30.0% |
| TTATGGTGAGAATTTCAATG+CGG | + | chr1_3:71778651-71778670 | Msa0138650:CDS | 30.0% | |
| GTTGAATGGAAAGAAAGAAA+TGG | + | chr1_3:71778990-71779009 | Msa0138650:CDS | 30.0% | |
| TCCTGTTATTAGAGCAAATT+TGG | + | chr1_3:71779017-71779036 | Msa0138650:CDS | 30.0% | |
| ! | ACCAAATTTGCTCTAATAAC+AGG | - | chr1_3:71779021-71779040 | None:intergenic | 30.0% |
| AACTAAGCGATATATGAGAT+TGG | - | chr1_3:71779112-71779131 | None:intergenic | 30.0% | |
| GATAAGAGTTTATATAGAGG+AGG | + | chr1_3:71779434-71779453 | Msa0138650:intron | 30.0% | |
| TTGCAGGGTTATAAGATTAT+TGG | + | chr1_3:71779576-71779595 | Msa0138650:intron | 30.0% | |
| ! | TGCTACAAGCATTCATTTTA+CGG | + | chr1_3:71779660-71779679 | Msa0138650:CDS | 30.0% |
| !! | GTTTCATTAGCATTTGGTTT+TGG | + | chr1_3:71779740-71779759 | Msa0138650:intron | 30.0% |
| ! | GGTTTTCATTGGCATAAATA+AGG | - | chr1_3:71779839-71779858 | None:intergenic | 30.0% |
| !! | CTTGAGATTTAGGTTTTCAT+TGG | - | chr1_3:71779850-71779869 | None:intergenic | 30.0% |
| TGAAAACCTAAATCTCAAGA+TGG | + | chr1_3:71779851-71779870 | Msa0138650:intron | 30.0% | |
| ! | TGACAGTTTTTAATCGTTGA+TGG | + | chr1_3:71779911-71779930 | Msa0138650:intron | 30.0% |
| ! | GCAACTTTTGATCATTTCAT+AGG | + | chr1_3:71780095-71780114 | Msa0138650:intron | 30.0% |
| !!! | TTTTTGGTGCTTGTTATAAG+TGG | + | chr1_3:71780132-71780151 | Msa0138650:intron | 30.0% |
| ! | CAAATAAATGTGTTTTCTGC+TGG | + | chr1_3:71780267-71780286 | Msa0138650:CDS | 30.0% |
| ATGCACACTTTCATAAAGTA+GGG | + | chr1_3:71780531-71780550 | Msa0138650:intron | 30.0% | |
| ! | AAACCCCTTTTCAAATTTCT+AGG | + | chr1_3:71780778-71780797 | Msa0138650:intron | 30.0% |
| TCCTCCTAGAAATTTGAAAA+GGG | - | chr1_3:71780785-71780804 | None:intergenic | 30.0% | |
| TGTTCACCTAAAACATCAAT+TGG | + | chr1_3:71780844-71780863 | Msa0138650:intron | 30.0% | |
| GTTCACCTAAAACATCAATT+GGG | + | chr1_3:71780845-71780864 | Msa0138650:intron | 30.0% | |
| ! | TTGTTCCCAATTGATGTTTT+AGG | - | chr1_3:71780853-71780872 | None:intergenic | 30.0% |
| ! | ACATCAATTGGGAACAATTT+TGG | + | chr1_3:71780856-71780875 | Msa0138650:intron | 30.0% |
| AGAGAATAGTCCTTACAATA+AGG | + | chr1_3:71780942-71780961 | Msa0138650:intron | 30.0% | |
| GAGAATAGTCCTTACAATAA+GGG | + | chr1_3:71780943-71780962 | Msa0138650:intron | 30.0% | |
| ATTTCCAACAACAGATAAGT+TGG | + | chr1_3:71781002-71781021 | Msa0138650:intron | 30.0% | |
| ATTTCCAACTTATCTGTTGT+TGG | - | chr1_3:71781009-71781028 | None:intergenic | 30.0% | |
| ATGCTCAAAATTATTTGACG+AGG | + | chr1_3:71781027-71781046 | Msa0138650:intron | 30.0% | |
| TGCTCAAAATTATTTGACGA+GGG | + | chr1_3:71781028-71781047 | Msa0138650:intron | 30.0% | |
| AAAATTATTTGACGAGGGTT+TGG | + | chr1_3:71781033-71781052 | Msa0138650:intron | 30.0% | |
| GAAGAAATAGAGAATTATCC+TGG | + | chr1_3:71781063-71781082 | Msa0138650:intron | 30.0% | |
| TTCATTTCAAACTTGAAGTG+GGG | + | chr1_3:71781131-71781150 | Msa0138650:intron | 30.0% | |
| ACATTACTGAAAACGGTAAT+TGG | - | chr1_3:71781394-71781413 | None:intergenic | 30.0% | |
| !! | TTTTCTGTTCACCTTTTTCA+AGG | + | chr1_3:71781514-71781533 | Msa0138650:intron | 30.0% |
| !!! | GTGTTTTGATGATGAAGAAT+CGG | - | chr1_3:71781614-71781633 | Msa0138660:CDS | 30.0% |
| ! | TTTTTGCAGAATGTTTTCCT+TGG | - | chr1_3:71781727-71781746 | Msa0138660:intron | 30.0% |
| ! | AATTATCTGATCAGCTTTTG+AGG | - | chr1_3:71781944-71781963 | Msa0138660:CDS | 30.0% |
| ACACTTTCTTCTCTCAAAAT+CGG | + | chr1_3:71782149-71782168 | Msa0138650:intron | 30.0% | |
| TTTCATGTCAAACTTGAAGT+GGG | - | chr1_3:71782324-71782343 | None:intergenic | 30.0% | |
| ! | TTTTCATGTCAAACTTGAAG+TGG | - | chr1_3:71782325-71782344 | None:intergenic | 30.0% |
| GTCCCAAAATATAAGCAAAA+AGG | - | chr1_3:71782616-71782635 | None:intergenic | 30.0% | |
| AATTATTTGAGGAGGGTTTA+AGG | - | chr1_3:71782749-71782768 | None:intergenic | 30.0% | |
| TGCTCAAAATTATTTGAGGA+GGG | - | chr1_3:71782756-71782775 | None:intergenic | 30.0% | |
| ATGCTCAAAATTATTTGAGG+AGG | - | chr1_3:71782757-71782776 | None:intergenic | 30.0% | |
| TCAAATGGTGCTTTCAATAA+GGG | - | chr1_3:71782832-71782851 | None:intergenic | 30.0% | |
| GAAATTGAGAGATTCTCAAA+TGG | - | chr1_3:71782847-71782866 | None:intergenic | 30.0% | |
| TGCTCCAAATAAAATGTCAA+TGG | + | chr1_3:71782979-71782998 | Msa0138650:intron | 30.0% | |
| ATAGTACTTTCTAATGCCTT+TGG | + | chr1_3:71783361-71783380 | Msa0138650:intron | 30.0% | |
| !!! | CAGCATCGTTTTAATTAAAC+GGG | - | chr1_3:71783603-71783622 | None:intergenic | 30.0% |
| !!! | GTTGGACGTGTTTTATTTTT+GGG | - | chr1_3:71783638-71783657 | None:intergenic | 30.0% |
| ! | GCTCATTTAACTCTTTTTGT+AGG | + | chr1_3:71784194-71784213 | Msa0138650:intron | 30.0% |
| TGCATTTGTAACTAGAAAAG+TGG | - | chr1_3:71784345-71784364 | None:intergenic | 30.0% | |
| CAAATAAATGCATTTCAGCT+AGG | - | chr1_3:71784672-71784691 | None:intergenic | 30.0% | |
| TGATAAATTTCATGATCTGG+TGG | + | chr1_3:71785286-71785305 | Msa0138650:intron | 30.0% | |
| GATAAATTTCATGATCTGGT+GGG | + | chr1_3:71785287-71785306 | Msa0138650:intron | 30.0% | |
| CAAATTCAGTCCAAAGTAAT+AGG | - | chr1_3:71785323-71785342 | None:intergenic | 30.0% | |
| CTATTACTTTGGACTGAATT+TGG | + | chr1_3:71785321-71785340 | Msa0138650:intron | 30.0% | |
| ! | TTTTGACAGCAAAGATTACA+TGG | + | chr1_3:71785404-71785423 | Msa0138650:CDS | 30.0% |
| AAAGAATCAGGTTAGAAGTT+AGG | + | chr1_3:71785525-71785544 | Msa0138650:intron | 30.0% | |
| TAAAGAAATGAAAGGGGAAA+TGG | - | chr1_3:71785569-71785588 | None:intergenic | 30.0% | |
| ! | TTGCTAGCATAGTAGTATTT+TGG | + | chr1_3:71785856-71785875 | Msa0138650:three_prime_UTR | 30.0% |
| !!! | TAGTATTTTGGTTTGAAGAG+AGG | + | chr1_3:71785868-71785887 | Msa0138650:three_prime_UTR | 30.0% |
| GGATTTGTAGAAGAAGTAGA+AGG | - | chr1_3:71778275-71778294 | None:intergenic | 35.0% | |
| !!! | AGCTTAGGGTTAGTTGTTTT+AGG | - | chr1_3:71778312-71778331 | None:intergenic | 35.0% |
| !!! | TGAAGAGGATTTTAGGGTTA+GGG | - | chr1_3:71778348-71778367 | None:intergenic | 35.0% |
| !!! | ATGAAGAGGATTTTAGGGTT+AGG | - | chr1_3:71778349-71778368 | None:intergenic | 35.0% |
| !! | TGTTGGTTTGAGAAATGAAG+AGG | - | chr1_3:71778363-71778382 | None:intergenic | 35.0% |
| AGTATAAATTCTTCGCCGAT+TGG | + | chr1_3:71778542-71778561 | Msa0138650:CDS | 35.0% | |
| TTTGTCGAAGTGTAGATTTG+CGG | + | chr1_3:71778606-71778625 | Msa0138650:CDS | 35.0% | |
| AAGTGTAGATTTGCGGTATT+CGG | + | chr1_3:71778613-71778632 | Msa0138650:CDS | 35.0% | |
| TTGGTAAGGAGATTGTGAAA+CGG | + | chr1_3:71778674-71778693 | Msa0138650:CDS | 35.0% | |
| AAGGTTGTTGGAATACTGAA+AGG | + | chr1_3:71778790-71778809 | Msa0138650:intron | 35.0% | |
| !! | ATACTGAAAGGTGTTGATGA+TGG | + | chr1_3:71778802-71778821 | Msa0138650:intron | 35.0% |
| GTTGATCTTGAAGATATTGC+CGG | + | chr1_3:71778916-71778935 | Msa0138650:CDS | 35.0% | |
| ! | CAGAAGAGCTATTGTGATTT+TGG | + | chr1_3:71779166-71779185 | Msa0138650:intron | 35.0% |
| AGTGATATTGCTTGCTTACT+TGG | + | chr1_3:71779195-71779214 | Msa0138650:intron | 35.0% | |
| TTGCTTACTTGGTACTTGTT+TGG | + | chr1_3:71779206-71779225 | Msa0138650:intron | 35.0% | |
| TCATAATTCGGACAAACTCA+CGG | - | chr1_3:71779237-71779256 | None:intergenic | 35.0% | |
| ! | TGGATTTTGCAAGATCACTA+TGG | + | chr1_3:71779294-71779313 | Msa0138650:intron | 35.0% |
| ! | GAGTCTTATCTATCTGATGT+GGG | - | chr1_3:71779412-71779431 | None:intergenic | 35.0% |
| ! | AGAGTCTTATCTATCTGATG+TGG | - | chr1_3:71779413-71779432 | None:intergenic | 35.0% |
| CTAACTCAACCTTACAAAAC+CGG | - | chr1_3:71779478-71779497 | None:intergenic | 35.0% | |
| !! | AAGATTATTGGTTCACACAG+TGG | + | chr1_3:71779588-71779607 | Msa0138650:CDS | 35.0% |
| TTTACGGAATTGAGAGTCAT+AGG | + | chr1_3:71779676-71779695 | Msa0138650:CDS | 35.0% | |
| GTTCACGTTTCATTAGCATT+TGG | + | chr1_3:71779734-71779753 | Msa0138650:intron | 35.0% | |
| !!! | TCATTAGCATTTGGTTTTGG+TGG | + | chr1_3:71779743-71779762 | Msa0138650:intron | 35.0% |
| ! | CTTTGTGTTGGTATTTGACA+TGG | + | chr1_3:71780018-71780037 | Msa0138650:intron | 35.0% |
| TTATGAGTGAAATAGGTGCA+TGG | + | chr1_3:71780220-71780239 | Msa0138650:intron | 35.0% | |
| ! | ATAAATGTGTTTTCTGCTGG+AGG | + | chr1_3:71780270-71780289 | Msa0138650:CDS | 35.0% |
| AAATCCAGTAGCGAAAAGTT+GGG | + | chr1_3:71780301-71780320 | Msa0138650:CDS | 35.0% | |
| GCAGAATTTACGATCTCTAT+TGG | - | chr1_3:71780344-71780363 | None:intergenic | 35.0% | |
| AAACAAATGAAAGGAGTTCC+TGG | + | chr1_3:71780389-71780408 | Msa0138650:CDS | 35.0% | |
| CATGCACACTTTCATAAAGT+AGG | + | chr1_3:71780530-71780549 | Msa0138650:intron | 35.0% | |
| AAGTAGGGTAAGTTTCATAC+CGG | + | chr1_3:71780546-71780565 | Msa0138650:intron | 35.0% | |
| AGATTATAATGTTTGCGTGC+AGG | + | chr1_3:71780586-71780605 | Msa0138650:intron | 35.0% | |
| TGAAAAGGGGTTTGTCTTTA+GGG | - | chr1_3:71780771-71780790 | None:intergenic | 35.0% | |
| TTGAAAAGGGGTTTGTCTTT+AGG | - | chr1_3:71780772-71780791 | None:intergenic | 35.0% | |
| CCTCCTAGAAATTTGAAAAG+GGG | - | chr1_3:71780784-71780803 | None:intergenic | 35.0% | |
| GTCCTCCTAGAAATTTGAAA+AGG | - | chr1_3:71780786-71780805 | None:intergenic | 35.0% | |
| TGGAACATCTATGCATGAAA+TGG | + | chr1_3:71780876-71780895 | Msa0138650:intron | 35.0% | |
| TACTGTTCTCCCTTATTGTA+AGG | - | chr1_3:71780955-71780974 | None:intergenic | 35.0% | |
| !! | ACACGATTTTGAGAGAAGAA+AGG | + | chr1_3:71781300-71781319 | Msa0138650:intron | 35.0% |
| !! | CACGATTTTGAGAGAAGAAA+GGG | + | chr1_3:71781301-71781320 | Msa0138650:intron | 35.0% |
| TCGATTTCCTTCCTTGAAAA+AGG | - | chr1_3:71781528-71781547 | None:intergenic | 35.0% | |
| !!! | TTTTTCAAGGAAGGAAATCG+AGG | + | chr1_3:71781527-71781546 | Msa0138650:intron | 35.0% |
| ! | ATTTCTGAAAACCTTTGCCT+TGG | - | chr1_3:71781582-71781601 | None:intergenic | 35.0% |
| GGTTAATGCTGAAATGTATG+AGG | - | chr1_3:71781689-71781708 | Msa0138660:CDS | 35.0% | |
| ! | AGAATGTTTTCCTTGGATTG+CGG | - | chr1_3:71781720-71781739 | Msa0138660:intron | 35.0% |
| !! | AACTGTTTCTGAACAACTCT+AGG | + | chr1_3:71781852-71781871 | Msa0138650:intron | 35.0% |
| GAAGATTTCATAGCATGCTT+GGG | - | chr1_3:71781909-71781928 | Msa0138660:CDS | 35.0% | |
| TTCACTTCTACGAGAATTGA+TGG | - | chr1_3:71782029-71782048 | Msa0138660:CDS | 35.0% | |
| CACTTTCTTCTCTCAAAATC+GGG | + | chr1_3:71782150-71782169 | Msa0138650:intron | 35.0% | |
| TTCATGTCAAACTTGAAGTG+GGG | - | chr1_3:71782323-71782342 | None:intergenic | 35.0% | |
| ! | TGCTTATAATTTGGGACGAA+GGG | - | chr1_3:71782357-71782376 | None:intergenic | 35.0% |
| ! | TTGCTTATAATTTGGGACGA+AGG | - | chr1_3:71782358-71782377 | None:intergenic | 35.0% |
| CTCAAATGGTGCTTTCAATA+AGG | - | chr1_3:71782833-71782852 | None:intergenic | 35.0% | |
| TCATTTATGCAGAGAGCTAT+GGG | - | chr1_3:71783127-71783146 | None:intergenic | 35.0% | |
| TTCATTTATGCAGAGAGCTA+TGG | - | chr1_3:71783128-71783147 | None:intergenic | 35.0% | |
| GAAAACACATGTTTGCAATC+AGG | + | chr1_3:71783159-71783178 | Msa0138650:intron | 35.0% | |
| !! | TTCATCGTTTTTGCGACTTT+CGG | - | chr1_3:71783517-71783536 | None:intergenic | 35.0% |
| CATAACAAGTACAGAAACGA+TGG | - | chr1_3:71783549-71783568 | None:intergenic | 35.0% | |
| !!! | CGTTGGACGTGTTTTATTTT+TGG | - | chr1_3:71783639-71783658 | None:intergenic | 35.0% |
| CAAAATCCTAGACAAGATCA+GGG | - | chr1_3:71784005-71784024 | None:intergenic | 35.0% | |
| TCAAAATCCTAGACAAGATC+AGG | - | chr1_3:71784006-71784025 | None:intergenic | 35.0% | |
| TCAAAATGATATAACGGTGC+TGG | - | chr1_3:71784110-71784129 | None:intergenic | 35.0% | |
| CTAATTATATGCAGAACGGT+GGG | - | chr1_3:71784163-71784182 | None:intergenic | 35.0% | |
| ACTAATTATATGCAGAACGG+TGG | - | chr1_3:71784164-71784183 | None:intergenic | 35.0% | |
| CATTGTGCATTATCTCTTGT+TGG | + | chr1_3:71784257-71784276 | Msa0138650:CDS | 35.0% | |
| TCCAGAGATAAATACACTTG+TGG | + | chr1_3:71784295-71784314 | Msa0138650:CDS | 35.0% | |
| TCCACAAGTGTATTTATCTC+TGG | - | chr1_3:71784299-71784318 | None:intergenic | 35.0% | |
| ! | TTCTGAAAACCTCAAAACCT+GGG | - | chr1_3:71784405-71784424 | None:intergenic | 35.0% |
| ! | ATTCTGAAAACCTCAAAACC+TGG | - | chr1_3:71784406-71784425 | None:intergenic | 35.0% |
| TTATATGTCAGTGTAGATGC+CGG | + | chr1_3:71784488-71784507 | Msa0138650:CDS | 35.0% | |
| ACATAGACAATGTGATCAAG+AGG | - | chr1_3:71784800-71784819 | None:intergenic | 35.0% | |
| ACCCTTGATTTCAATGAAGT+CGG | - | chr1_3:71784962-71784981 | None:intergenic | 35.0% | |
| !! | ATCAAGGGTGTTACATATTG+TGG | + | chr1_3:71784973-71784992 | Msa0138650:CDS | 35.0% |
| AAGAATTTAGCTGGACTAAG+GGG | - | chr1_3:71785034-71785053 | None:intergenic | 35.0% | |
| CAAGAATTTAGCTGGACTAA+GGG | - | chr1_3:71785035-71785054 | None:intergenic | 35.0% | |
| TCAAGAATTTAGCTGGACTA+AGG | - | chr1_3:71785036-71785055 | None:intergenic | 35.0% | |
| AGTTCATTGTCATTCGAAGA+TGG | - | chr1_3:71785066-71785085 | None:intergenic | 35.0% | |
| AATGACAATGAACTCTTCTC+AGG | + | chr1_3:71785072-71785091 | Msa0138650:intron | 35.0% | |
| TAACAATGGAAAATGTCCCT+TGG | + | chr1_3:71785111-71785130 | Msa0138650:CDS | 35.0% | |
| !! | ACTTCTTAGTTTTTGCCAAG+AGG | - | chr1_3:71785229-71785248 | None:intergenic | 35.0% |
| ATTTAAATTCAGGTGGCTTC+TGG | + | chr1_3:71785375-71785394 | Msa0138650:intron | 35.0% | |
| ACTTCTAACCTGATTCTTTG+CGG | - | chr1_3:71785524-71785543 | None:intergenic | 35.0% | |
| ACATTGGGACTTAAATACAC+TGG | - | chr1_3:71785671-71785690 | None:intergenic | 35.0% | |
| ! | ACGCAATGCTATTTATTGCA+AGG | - | chr1_3:71785814-71785833 | None:intergenic | 35.0% |
| TTGAAGAGAGGTAGATAAAG+TGG | + | chr1_3:71785880-71785899 | Msa0138650:three_prime_UTR | 35.0% | |
| GTAGAAGAAGTAGAAGGTTG+TGG | - | chr1_3:71778269-71778288 | None:intergenic | 40.0% | |
| !!! | GTTGTTTTAGGCTTCGTAAG+CGG | - | chr1_3:71778300-71778319 | None:intergenic | 40.0% |
| !!! | AGGATTTTAGGGTTAGGGTT+GGG | - | chr1_3:71778343-71778362 | None:intergenic | 40.0% |
| !! | ATAAGGAGAAGCGTTTCCTT+GGG | - | chr1_3:71778484-71778503 | None:intergenic | 40.0% |
| TCGGCGAAGAATTTATACTC+CGG | - | chr1_3:71778541-71778560 | None:intergenic | 40.0% | |
| !!! | AGTTCGGAGGATTTTAGAGT+TGG | + | chr1_3:71778574-71778593 | Msa0138650:CDS | 40.0% |
| ! | GAATTTCAATGCGGTTGGTA+AGG | + | chr1_3:71778660-71778679 | Msa0138650:CDS | 40.0% |
| !! | TGGATGAGGTTTTTGAGAAG+TGG | + | chr1_3:71778761-71778780 | Msa0138650:intron | 40.0% |
| !! | AGGTTTTTGAGAAGTGGTGT+GGG | + | chr1_3:71778767-71778786 | Msa0138650:intron | 40.0% |
| !! | TGTTGATGATGGTGGTGATT+TGG | + | chr1_3:71778813-71778832 | Msa0138650:CDS | 40.0% |
| TGATGAAGAAGAGTCTGATG+AGG | + | chr1_3:71778870-71778889 | Msa0138650:CDS | 40.0% | |
| ! | GAGAGTAATGGGAAGTTGAA+TGG | + | chr1_3:71778976-71778995 | Msa0138650:CDS | 40.0% |
| ! | TAGAGCAAATTTGGTGAAGC+AGG | + | chr1_3:71779026-71779045 | Msa0138650:CDS | 40.0% |
| ! | ATTTTGCGAAAGCTACACTC+TGG | + | chr1_3:71779269-71779288 | Msa0138650:intron | 40.0% |
| ATCTATCTGATGTGGGACTT+GGG | - | chr1_3:71779405-71779424 | None:intergenic | 40.0% | |
| TATCTATCTGATGTGGGACT+TGG | - | chr1_3:71779406-71779425 | None:intergenic | 40.0% | |
| ! | GTGGTGTCAAGATTTGTAGA+TGG | + | chr1_3:71779607-71779626 | Msa0138650:CDS | 40.0% |
| CAAGCTCCATCTTGAGATTT+AGG | - | chr1_3:71779860-71779879 | None:intergenic | 40.0% | |
| TTCGATGTACGTTTCATCGA+TGG | + | chr1_3:71779886-71779905 | Msa0138650:intron | 40.0% | |
| GGCTTAGAAGAAGAATGTTC+TGG | + | chr1_3:71780039-71780058 | Msa0138650:intron | 40.0% | |
| TATTTGCACATGCCAAGCTA+GGG | - | chr1_3:71780253-71780272 | None:intergenic | 40.0% | |
| TTATTTGCACATGCCAAGCT+AGG | - | chr1_3:71780254-71780273 | None:intergenic | 40.0% | |
| CAAATCCAGTAGCGAAAAGT+TGG | + | chr1_3:71780300-71780319 | Msa0138650:CDS | 40.0% | |
| !! | ACACATTGTTGTCAGGTTGA+TGG | + | chr1_3:71780459-71780478 | Msa0138650:intron | 40.0% |
| ! | ACTGGAGTATTTAGGGAAAG+AGG | - | chr1_3:71780730-71780749 | None:intergenic | 40.0% |
| !! | CCCCTTTTCAAATTTCTAGG+AGG | + | chr1_3:71780781-71780800 | Msa0138650:intron | 40.0% |
| GTTGAAGAAAGCGAGACAAA+TGG | + | chr1_3:71781085-71781104 | Msa0138650:intron | 40.0% | |
| ! | GTTAGACATTGAAGCACTAG+CGG | - | chr1_3:71781201-71781220 | None:intergenic | 40.0% |
| GTCTAACTCCAACGAATCAA+CGG | + | chr1_3:71781214-71781233 | Msa0138650:intron | 40.0% | |
| AGTCGTAGAATCAGAGAATG+AGG | + | chr1_3:71781347-71781366 | Msa0138650:intron | 40.0% | |
| TCTCCGACAATAATTGACAG+TGG | + | chr1_3:71781430-71781449 | Msa0138650:intron | 40.0% | |
| TCGCCACTGTCAATTATTGT+CGG | - | chr1_3:71781436-71781455 | None:intergenic | 40.0% | |
| !!! | CTGTTCACCTTTTTCAAGGA+AGG | + | chr1_3:71781518-71781537 | Msa0138650:intron | 40.0% |
| GGAAATCGAGGAAGATTTCA+TGG | + | chr1_3:71781539-71781558 | Msa0138650:intron | 40.0% | |
| AAAACCTTTGCCTTGGTTGA+CGG | - | chr1_3:71781575-71781594 | None:intergenic | 40.0% | |
| AAAATAGGAGATCTGCGAAG+AGG | - | chr1_3:71781651-71781670 | Msa0138660:CDS | 40.0% | |
| TTTCCTTGGATTGCGGTTAA+GGG | - | chr1_3:71781713-71781732 | Msa0138660:CDS | 40.0% | |
| ! | TTTTCCTTGGATTGCGGTTA+AGG | - | chr1_3:71781714-71781733 | Msa0138660:CDS | 40.0% |
| GGAAGATTTCATAGCATGCT+TGG | - | chr1_3:71781910-71781929 | Msa0138660:CDS | 40.0% | |
| !! | ATCTGATCAGCTTTTGAGGA+AGG | - | chr1_3:71781940-71781959 | Msa0138660:CDS | 40.0% |
| ACTTCTACGAGAATTGATGG+CGG | - | chr1_3:71782026-71782045 | Msa0138660:CDS | 40.0% | |
| AGTTGTGGAATCAGAGAATG+AGG | - | chr1_3:71782109-71782128 | Msa0138660:CDS | 40.0% | |
| GTCTTTCATTCTATCTGTGG+CGG | + | chr1_3:71782172-71782191 | Msa0138650:intron | 40.0% | |
| !! | AGCACCGACAATATCGATAA+TGG | + | chr1_3:71782265-71782284 | Msa0138650:intron | 40.0% |
| ! | ACCGACAATATCGATAATGG+CGG | + | chr1_3:71782268-71782287 | Msa0138650:intron | 40.0% |
| TTGCTTATATTATGGGACGG+AGG | + | chr1_3:71782654-71782673 | Msa0138650:intron | 40.0% | |
| TGCTTATATTATGGGACGGA+GGG | + | chr1_3:71782655-71782674 | Msa0138650:intron | 40.0% | |
| ! | TTGACTCGCTTTCTTCAATC+TGG | + | chr1_3:71782700-71782719 | Msa0138650:intron | 40.0% |
| TTGTTTACCTCCTCTCAGAT+GGG | - | chr1_3:71783086-71783105 | None:intergenic | 40.0% | |
| ATTGTTTACCTCCTCTCAGA+TGG | - | chr1_3:71783087-71783106 | None:intergenic | 40.0% | |
| AGTACTTTGTGGATAGTGAC+AGG | - | chr1_3:71783251-71783270 | None:intergenic | 40.0% | |
| ATGCCTTTGGATTTGTGTGA+TGG | + | chr1_3:71783374-71783393 | Msa0138650:intron | 40.0% | |
| ATGCCATCACACAAATCCAA+AGG | - | chr1_3:71783380-71783399 | None:intergenic | 40.0% | |
| !!! | GATCACGATTTTGACTACCT+AGG | - | chr1_3:71783405-71783424 | None:intergenic | 40.0% |
| AAAATCGTGATCCAACTCGT+AGG | + | chr1_3:71783413-71783432 | Msa0138650:intron | 40.0% | |
| !!! | CGTTTTAATTAAACGGGTCG+TGG | - | chr1_3:71783597-71783616 | None:intergenic | 40.0% |
| GCAACTTTGCAATGCCAATA+TGG | - | chr1_3:71784056-71784075 | None:intergenic | 40.0% | |
| !!! | TCATTTTGACTGATACTGGG+AGG | + | chr1_3:71784121-71784140 | Msa0138650:intron | 40.0% |
| ! | TCTTTTTGTAGGAGTCACCT+CGG | + | chr1_3:71784205-71784224 | Msa0138650:intron | 40.0% |
| TTGTGGATGAGTTGCACAAA+AGG | + | chr1_3:71784312-71784331 | Msa0138650:CDS | 40.0% | |
| AACCTCAAAACCTGGGTAAT+AGG | - | chr1_3:71784398-71784417 | None:intergenic | 40.0% | |
| CTTAAGAGAGTCCTTTGTTC+CGG | - | chr1_3:71784510-71784529 | None:intergenic | 40.0% | |
| ! | ACCACTCTTTGGAGATTTCT+GGG | + | chr1_3:71784541-71784560 | Msa0138650:CDS | 40.0% |
| CATGATCACCATCTGAAGAA+GGG | + | chr1_3:71784731-71784750 | Msa0138650:intron | 40.0% | |
| ATGATCACCATCTGAAGAAG+GGG | + | chr1_3:71784732-71784751 | Msa0138650:intron | 40.0% | |
| ! | TTTTTCCTTCAGAGCAGTCA+AGG | - | chr1_3:71784848-71784867 | None:intergenic | 40.0% |
| AGCATTCCATCCTTTCACAA+GGG | - | chr1_3:71784896-71784915 | None:intergenic | 40.0% | |
| ACCCGACTTCATTGAAATCA+AGG | + | chr1_3:71784957-71784976 | Msa0138650:CDS | 40.0% | |
| CCCTTGATTTCAATGAAGTC+GGG | - | chr1_3:71784961-71784980 | None:intergenic | 40.0% | |
| CCCGACTTCATTGAAATCAA+GGG | + | chr1_3:71784958-71784977 | Msa0138650:CDS | 40.0% | |
| TAGAGATAGAGAGAGAAGAG+GGG | - | chr1_3:71785011-71785030 | None:intergenic | 40.0% | |
| GTAGAGATAGAGAGAGAAGA+GGG | - | chr1_3:71785012-71785031 | None:intergenic | 40.0% | |
| ! | AGTTCAAAATTGATGGCCAG+TGG | + | chr1_3:71785246-71785265 | Msa0138650:CDS | 40.0% |
| AGTCTATCCATGTATACCAC+TGG | - | chr1_3:71785265-71785284 | None:intergenic | 40.0% | |
| ATCCAGGACAGTTGAGATAT+AGG | + | chr1_3:71785475-71785494 | Msa0138650:CDS | 40.0% | |
| TTCCTATATCTCAACTGTCC+TGG | - | chr1_3:71785480-71785499 | None:intergenic | 40.0% | |
| AGGTTAGAAGTTAGGCCTTT+GGG | + | chr1_3:71785533-71785552 | Msa0138650:intron | 40.0% | |
| ATGAAAGGGGAAATGGATGT+TGG | - | chr1_3:71785562-71785581 | None:intergenic | 40.0% | |
| CCTCGAATTGGGAAAACATT+GGG | - | chr1_3:71785686-71785705 | None:intergenic | 40.0% | |
| TTCCTCAATTGCCTCGAATT+GGG | - | chr1_3:71785697-71785716 | None:intergenic | 40.0% | |
| TTTCCTCAATTGCCTCGAAT+TGG | - | chr1_3:71785698-71785717 | None:intergenic | 40.0% | |
| GAAGAAGTAGAAGGTTGTGG+CGG | - | chr1_3:71778266-71778285 | None:intergenic | 45.0% | |
| !!! | GGATTTTAGGGTTAGGGTTG+GGG | - | chr1_3:71778342-71778361 | None:intergenic | 45.0% |
| !!! | GAGGATTTTAGGGTTAGGGT+TGG | - | chr1_3:71778344-71778363 | None:intergenic | 45.0% |
| !!! | AGAGAGGGTTTTGGAAGTGT+TGG | - | chr1_3:71778380-71778399 | None:intergenic | 45.0% |
| ! | GGTTGTTTGAGGTGAGGAAA+CGG | - | chr1_3:71778414-71778433 | None:intergenic | 45.0% |
| ! | ATGCAAGGTTGTTTGAGGTG+AGG | - | chr1_3:71778420-71778439 | None:intergenic | 45.0% |
| GTCGAATGCAAGGTTGTTTG+AGG | - | chr1_3:71778425-71778444 | None:intergenic | 45.0% | |
| CATCGATGATGTCGAATGCA+AGG | - | chr1_3:71778435-71778454 | None:intergenic | 45.0% | |
| CTTGCATTCGACATCATCGA+TGG | + | chr1_3:71778433-71778452 | Msa0138650:intron | 45.0% | |
| !! | TAAGGAGAAGCGTTTCCTTG+GGG | - | chr1_3:71778483-71778502 | None:intergenic | 45.0% |
| !! | GATAAGGAGAAGCGTTTCCT+TGG | - | chr1_3:71778485-71778504 | None:intergenic | 45.0% |
| TCCTTATCGTTGCTTCCACT+TGG | + | chr1_3:71778497-71778516 | Msa0138650:intron | 45.0% | |
| CCTTATCGTTGCTTCCACTT+GGG | + | chr1_3:71778498-71778517 | Msa0138650:intron | 45.0% | |
| AAGAATTTATACTCCGGCGG+TGG | - | chr1_3:71778535-71778554 | None:intergenic | 45.0% | |
| GCGAAGAATTTATACTCCGG+CGG | - | chr1_3:71778538-71778557 | None:intergenic | 45.0% | |
| !! | AGATTTGCGGTATTCGGTGT+CGG | + | chr1_3:71778619-71778638 | Msa0138650:CDS | 45.0% |
| GGTGAGAATTTCAATGCGGT+TGG | + | chr1_3:71778655-71778674 | Msa0138650:CDS | 45.0% | |
| GGAGATTGTGAAACGGATGA+AGG | + | chr1_3:71778681-71778700 | Msa0138650:CDS | 45.0% | |
| ! | TGGTAACGAGATGATTCCGT+TGG | + | chr1_3:71778711-71778730 | Msa0138650:CDS | 45.0% |
| GGTAACGAGATGATTCCGTT+GGG | + | chr1_3:71778712-71778731 | Msa0138650:CDS | 45.0% | |
| GTAACGAGATGATTCCGTTG+GGG | + | chr1_3:71778713-71778732 | Msa0138650:CDS | 45.0% | |
| TAACGAGATGATTCCGTTGG+GGG | + | chr1_3:71778714-71778733 | Msa0138650:CDS | 45.0% | |
| !! | GAGGTTTTTGAGAAGTGGTG+TGG | + | chr1_3:71778766-71778785 | Msa0138650:intron | 45.0% |
| !! | TTTTGAGAAGTGGTGTGGGA+AGG | + | chr1_3:71778771-71778790 | Msa0138650:intron | 45.0% |
| !! | CTGAAAGGTGTTGATGATGG+TGG | + | chr1_3:71778805-71778824 | Msa0138650:intron | 45.0% |
| ! | TGGTGATTTGGAGAATGCTG+AGG | + | chr1_3:71778825-71778844 | Msa0138650:CDS | 45.0% |
| ! | TGATTTGGAGAATGCTGAGG+AGG | + | chr1_3:71778828-71778847 | Msa0138650:CDS | 45.0% |
| TGAAGAAGAGTCTGATGAGG+AGG | + | chr1_3:71778873-71778892 | Msa0138650:CDS | 45.0% | |
| CTACGGTGAAGGAGAGTAAT+GGG | + | chr1_3:71778965-71778984 | Msa0138650:CDS | 45.0% | |
| GTCCGAATTATGATGACCCA+CGG | + | chr1_3:71779244-71779263 | Msa0138650:intron | 45.0% | |
| CACCGTGGGTCATCATAATT+CGG | - | chr1_3:71779249-71779268 | None:intergenic | 45.0% | |
| AGCTTTCGCAAAATCACCGT+GGG | - | chr1_3:71779263-71779282 | None:intergenic | 45.0% | |
| TAGCTTTCGCAAAATCACCG+TGG | - | chr1_3:71779264-71779283 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1_3:71779469-71779488 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1_3:71779466-71779485 | Msa0138650:intron | 45.0% |
| TCGTTTATGTGTCGTGCTAG+CGG | + | chr1_3:71779774-71779793 | Msa0138650:intron | 45.0% | |
| TGAGTGAAATAGGTGCATGG+AGG | + | chr1_3:71780223-71780242 | Msa0138650:intron | 45.0% | |
| ATTTGCACATGCCAAGCTAG+GGG | - | chr1_3:71780252-71780271 | None:intergenic | 45.0% | |
| AGTAGCGAAAAGTTGGGTGT+GGG | + | chr1_3:71780307-71780326 | Msa0138650:CDS | 45.0% | |
| TGTTTGCGTGCAGGAGTTTA+AGG | + | chr1_3:71780595-71780614 | Msa0138650:intron | 45.0% | |
| GTTTGCGTGCAGGAGTTTAA+GGG | + | chr1_3:71780596-71780615 | Msa0138650:intron | 45.0% | |
| TTGTCTCGCTTTCTTCAACC+AGG | - | chr1_3:71781084-71781103 | None:intergenic | 45.0% | |
| !! | AGCACTAGCGGTATCGATAA+CGG | - | chr1_3:71781189-71781208 | None:intergenic | 45.0% |
| GTGGCGATAATGTTTCGTCA+AGG | + | chr1_3:71781449-71781468 | Msa0138650:intron | 45.0% | |
| TCGAGGAAGATTTCATGGCA+TGG | + | chr1_3:71781544-71781563 | Msa0138650:intron | 45.0% | |
| GAAGATTTCATGGCATGGCT+GGG | + | chr1_3:71781549-71781568 | Msa0138650:intron | 45.0% | |
| ATTTCATAGCATGCTTGGGC+CGG | - | chr1_3:71781905-71781924 | Msa0138660:CDS | 45.0% | |
| !! | GCTTTTGAGGAAGGAAATCG+AGG | - | chr1_3:71781931-71781950 | Msa0138660:CDS | 45.0% |
| GCGGCAATAATGTTTCATCC+AGG | - | chr1_3:71782007-71782026 | Msa0138660:CDS | 45.0% | |
| ACGTTTCGCATTACCAGAGA+CGG | + | chr1_3:71782052-71782071 | Msa0138650:intron | 45.0% | |
| GCATTACCAGAGACGGTAAT+CGG | + | chr1_3:71782059-71782078 | Msa0138650:intron | 45.0% | |
| CGGGTCTTTCATTCTATCTG+TGG | + | chr1_3:71782169-71782188 | Msa0138650:intron | 45.0% | |
| GCCGCCATTATCGATATTGT+CGG | - | chr1_3:71782272-71782291 | Msa0138660:CDS | 45.0% | |
| GTTGTAGCTCTCTACAACAC+AGG | + | chr1_3:71783036-71783055 | Msa0138650:intron | 45.0% | |
| TTTGTGTGATGGCATGACCT+AGG | + | chr1_3:71783385-71783404 | Msa0138650:intron | 45.0% | |
| AATCGTACGATCCTACGAGT+TGG | - | chr1_3:71783427-71783446 | None:intergenic | 45.0% | |
| !! | ATCGTTTTTGCGACTTTCGG+CGG | - | chr1_3:71783514-71783533 | None:intergenic | 45.0% |
| ATAAAACACGTCCAACGCTG+TGG | + | chr1_3:71783642-71783661 | Msa0138650:intron | 45.0% | |
| CAAATAGGAAACCACAGCGT+TGG | - | chr1_3:71783656-71783675 | None:intergenic | 45.0% | |
| TGTTGGCGTGTAGCACAAAT+AGG | - | chr1_3:71783671-71783690 | None:intergenic | 45.0% | |
| ATCCTTCCCTGATCTTGTCT+AGG | + | chr1_3:71783996-71784015 | Msa0138650:intron | 45.0% | |
| ATCCTAGACAAGATCAGGGA+AGG | - | chr1_3:71784001-71784020 | None:intergenic | 45.0% | |
| ! | TAACTGAAGGCATGACACCA+CGG | + | chr1_3:71784234-71784253 | Msa0138650:CDS | 45.0% |
| AGAGATAATGCACAATGCCG+TGG | - | chr1_3:71784254-71784273 | None:intergenic | 45.0% | |
| TGGATGAGTTGCACAAAAGG+AGG | + | chr1_3:71784315-71784334 | Msa0138650:CDS | 45.0% | |
| ! | AGCCTATTACCCAGGTTTTG+AGG | + | chr1_3:71784393-71784412 | Msa0138650:intron | 45.0% |
| CGGAACAAAGGACTCTCTTA+AGG | + | chr1_3:71784508-71784527 | Msa0138650:CDS | 45.0% | |
| GCAATCGATAGACCACTCTT+TGG | + | chr1_3:71784530-71784549 | Msa0138650:CDS | 45.0% | |
| ! | GACCACTCTTTGGAGATTTC+TGG | + | chr1_3:71784540-71784559 | Msa0138650:CDS | 45.0% |
| TCCCAGAAATCTCCAAAGAG+TGG | - | chr1_3:71784545-71784564 | None:intergenic | 45.0% | |
| GCATGATCACCATCTGAAGA+AGG | + | chr1_3:71784730-71784749 | Msa0138650:intron | 45.0% | |
| CAGCATTCCATCCTTTCACA+AGG | - | chr1_3:71784897-71784916 | None:intergenic | 45.0% | |
| AGAGATAGAGAGAGAAGAGG+GGG | - | chr1_3:71785010-71785029 | None:intergenic | 45.0% | |
| GGTAGAGATAGAGAGAGAAG+AGG | - | chr1_3:71785013-71785032 | None:intergenic | 45.0% | |
| ! | CTCTGTCTCTGAAAAGCCAA+GGG | + | chr1_3:71785162-71785181 | Msa0138650:CDS | 45.0% |
| ! | TCTGTCTCTGAAAAGCCAAG+GGG | + | chr1_3:71785163-71785182 | Msa0138650:CDS | 45.0% |
| ! | TTGATGGCCAGTGGTATACA+TGG | + | chr1_3:71785255-71785274 | Msa0138650:CDS | 45.0% |
| CAGGTTAGAAGTTAGGCCTT+TGG | + | chr1_3:71785532-71785551 | Msa0138650:intron | 45.0% | |
| ! | AATGGATGTTGGCTACCCAA+AGG | - | chr1_3:71785551-71785570 | None:intergenic | 45.0% |
| ! | CCCAATGTTTTCCCAATTCG+AGG | + | chr1_3:71785683-71785702 | Msa0138650:intron | 45.0% |
| GCCTCGAATTGGGAAAACAT+TGG | - | chr1_3:71785687-71785706 | None:intergenic | 45.0% | |
| TTCCCAATTCGAGGCAATTG+AGG | + | chr1_3:71785692-71785711 | Msa0138650:intron | 45.0% | |
| !! | AAAAAAAAAAAAATCAAATT+AGG | + | chr1_3:71781743-71781762 | Msa0138650:intron | 5.0% |
| !! | TTCTTAATAATATATTTAAA+TGG | - | chr1_3:71783301-71783320 | None:intergenic | 5.0% |
| !!! | TAAGAAAATATTTTTTTTTA+TGG | + | chr1_3:71783811-71783830 | Msa0138650:intron | 5.0% |
| !!! | AAGAAAATATTTTTTTTTAT+GGG | + | chr1_3:71783812-71783831 | Msa0138650:intron | 5.0% |
| !!! | TTTTTATAAATAAGTAAAAT+CGG | + | chr1_3:71784081-71784100 | Msa0138650:intron | 5.0% |
| ! | TTTTAGGCTTCGTAAGCGGC+GGG | - | chr1_3:71778296-71778315 | None:intergenic | 50.0% |
| !! | GTTTTAGGCTTCGTAAGCGG+CGG | - | chr1_3:71778297-71778316 | None:intergenic | 50.0% |
| !!! | GTTGGGGTTTTGGGAGCTTA+GGG | - | chr1_3:71778326-71778345 | None:intergenic | 50.0% |
| ! | AGGGTTAGGGTTGGGGTTTT+GGG | - | chr1_3:71778335-71778354 | None:intergenic | 50.0% |
| ! | TAGGGTTAGGGTTGGGGTTT+TGG | - | chr1_3:71778336-71778355 | None:intergenic | 50.0% |
| ! | TGTTTGAGGTGAGGAAACGG+TGG | - | chr1_3:71778411-71778430 | None:intergenic | 50.0% |
| GTTTCCTTGGGGAGATCTTC+GGG | - | chr1_3:71778472-71778491 | None:intergenic | 50.0% | |
| CGTTTCCTTGGGGAGATCTT+CGG | - | chr1_3:71778473-71778492 | None:intergenic | 50.0% | |
| CCCAAGTGGAAGCAACGATA+AGG | - | chr1_3:71778501-71778520 | None:intergenic | 50.0% | |
| GTTGCTTCCACTTGGGAAGA+CGG | + | chr1_3:71778505-71778524 | Msa0138650:intron | 50.0% | |
| ! | TGGTTTTCCGTCTTCCCAAG+TGG | - | chr1_3:71778515-71778534 | None:intergenic | 50.0% |
| !! | ATTCTTCGCCGATTGGCTTG+CGG | + | chr1_3:71778549-71778568 | Msa0138650:CDS | 50.0% |
| ! | TGTGAAACGGATGAAGGCGT+TGG | + | chr1_3:71778687-71778706 | Msa0138650:CDS | 50.0% |
| !! | GTGAAACGGATGAAGGCGTT+GGG | + | chr1_3:71778688-71778707 | Msa0138650:CDS | 50.0% |
| TCAACATCTCCTTCCCCCAA+CGG | - | chr1_3:71778730-71778749 | None:intergenic | 50.0% | |
| TTGGGGGAAGGAGATGTTGA+TGG | + | chr1_3:71778730-71778749 | Msa0138650:CDS | 50.0% | |
| !! | AGGAGATGTTGATGGTGGTG+AGG | + | chr1_3:71778738-71778757 | Msa0138650:intron | 50.0% |
| !! | AGATGTTGATGGTGGTGAGG+TGG | + | chr1_3:71778741-71778760 | Msa0138650:intron | 50.0% |
| AAGTGGTGTGGGAAGGTTGT+TGG | + | chr1_3:71778778-71778797 | Msa0138650:intron | 50.0% | |
| GAGAATGCTGAGGAGGAAAG+CGG | + | chr1_3:71778835-71778854 | Msa0138650:CDS | 50.0% | |
| AGAGTCTGATGAGGAGGAAG+AGG | + | chr1_3:71778879-71778898 | Msa0138650:CDS | 50.0% | |
| !! | CTTCCTCGAAGGTGCTTTAC+CGG | - | chr1_3:71778938-71778957 | None:intergenic | 50.0% |
| ! | TAAAGCACCTTCGAGGAAGC+TGG | + | chr1_3:71778939-71778958 | Msa0138650:CDS | 50.0% |
| GCTACGGTGAAGGAGAGTAA+TGG | + | chr1_3:71778964-71778983 | Msa0138650:CDS | 50.0% | |
| GCGAAAGCTACACTCTGGTT+TGG | + | chr1_3:71779274-71779293 | Msa0138650:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr1_3:71779456-71779475 | Msa0138650:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1_3:71779464-71779483 | None:intergenic | 50.0% |
| TGGACTAAGTCACAGCTTCG+AGG | + | chr1_3:71779627-71779646 | Msa0138650:CDS | 50.0% | |
| ! | CACACCCAACTTTTCGCTAC+TGG | - | chr1_3:71780308-71780327 | None:intergenic | 50.0% |
| CAGTAGCGAAAAGTTGGGTG+TGG | + | chr1_3:71780306-71780325 | Msa0138650:CDS | 50.0% | |
| GAAAAGTTGGGTGTGGGAGA+TGG | + | chr1_3:71780313-71780332 | Msa0138650:CDS | 50.0% | |
| GACGCTGACACATTGTTGTC+AGG | + | chr1_3:71780452-71780471 | Msa0138650:intron | 50.0% | |
| ! | CTACAGCTAGAGCTAGTCTC+CGG | - | chr1_3:71780568-71780587 | None:intergenic | 50.0% |
| !! | ACTAGCGGTATCGATAACGG+CGG | - | chr1_3:71781186-71781205 | None:intergenic | 50.0% |
| GCATGATCTGAAAATCGCCG+CGG | + | chr1_3:71781265-71781284 | Msa0138650:intron | 50.0% | |
| GAAAATCGCCGCGGATAGAA+TGG | + | chr1_3:71781274-71781293 | Msa0138650:intron | 50.0% | |
| CGTGTCTTCCATTCTATCCG+CGG | - | chr1_3:71781285-71781304 | None:intergenic | 50.0% | |
| GGAAGATTTCATGGCATGGC+TGG | + | chr1_3:71781548-71781567 | Msa0138650:intron | 50.0% | |
| CTGCGAAGAGGAAAGGGAAA+GGG | - | chr1_3:71781639-71781658 | Msa0138660:CDS | 50.0% | |
| TCTGCGAAGAGGAAAGGGAA+AGG | - | chr1_3:71781640-71781659 | Msa0138660:CDS | 50.0% | |
| GGAGATCTGCGAAGAGGAAA+GGG | - | chr1_3:71781645-71781664 | Msa0138660:CDS | 50.0% | |
| AGGAGATCTGCGAAGAGGAA+AGG | - | chr1_3:71781646-71781665 | Msa0138660:CDS | 50.0% | |
| AACAACTCTAGGCCTCTCAG+TGG | + | chr1_3:71781863-71781882 | Msa0138650:intron | 50.0% | |
| ACAACTCTAGGCCTCTCAGT+GGG | + | chr1_3:71781864-71781883 | Msa0138650:intron | 50.0% | |
| CAAGACAAAAGCCCACTGAG+AGG | - | chr1_3:71781878-71781897 | Msa0138660:CDS | 50.0% | |
| !! | CTCTCAGTGGGCTTTTGTCT+TGG | + | chr1_3:71781876-71781895 | Msa0138650:intron | 50.0% |
| ! | TGGGCTTTTGTCTTGGTTGC+CGG | + | chr1_3:71781883-71781902 | Msa0138650:intron | 50.0% |
| AAAGCTCCGATTACCGTCTC+TGG | - | chr1_3:71782068-71782087 | Msa0138660:CDS | 50.0% | |
| CAACGAATCAGCAGAGATCG+TGG | - | chr1_3:71782231-71782250 | Msa0138660:CDS | 50.0% | |
| !! | CACGATCTCTGCTGATTCGT+TGG | + | chr1_3:71782229-71782248 | Msa0138650:intron | 50.0% |
| ! | GACGGAGGGAGTATGTTGTT+GGG | + | chr1_3:71782669-71782688 | Msa0138650:intron | 50.0% |
| CAGATGTTAGCCCATCTGAG+AGG | + | chr1_3:71783073-71783092 | Msa0138650:intron | 50.0% | |
| ATGTTAGCCCATCTGAGAGG+AGG | + | chr1_3:71783076-71783095 | Msa0138650:intron | 50.0% | |
| CACATGTTTGCAATCAGGCC+AGG | + | chr1_3:71783164-71783183 | Msa0138650:intron | 50.0% | |
| TGTTTGCAATCAGGCCAGGT+AGG | + | chr1_3:71783168-71783187 | Msa0138650:intron | 50.0% | |
| !! | TCTGGTCTGGTCTTATCCAG+TGG | + | chr1_3:71783220-71783239 | Msa0138650:intron | 50.0% |
| TTTGTGGATAGTGACAGGCC+CGG | - | chr1_3:71783246-71783265 | None:intergenic | 50.0% | |
| TGCTGGAGTATGGCCGAATT+TGG | + | chr1_3:71783470-71783489 | Msa0138650:intron | 50.0% | |
| TGGAGTATGGCCGAATTTGG+TGG | + | chr1_3:71783473-71783492 | Msa0138650:intron | 50.0% | |
| GGAGTATGGCCGAATTTGGT+GGG | + | chr1_3:71783474-71783493 | Msa0138650:intron | 50.0% | |
| ! | GAGTATGGCCGAATTTGGTG+GGG | + | chr1_3:71783475-71783494 | Msa0138650:intron | 50.0% |
| ! | AGTATGGCCGAATTTGGTGG+GGG | + | chr1_3:71783476-71783495 | Msa0138650:intron | 50.0% |
| ACCTCGGAGCGATTAACTGA+AGG | + | chr1_3:71784221-71784240 | Msa0138650:CDS | 50.0% | |
| GTTGCTGAAGCCTATTACCC+AGG | + | chr1_3:71784385-71784404 | Msa0138650:CDS | 50.0% | |
| CAGTGTAGATGCCGGAACAA+AGG | + | chr1_3:71784496-71784515 | Msa0138650:CDS | 50.0% | |
| TCAGAGCAGTCAAGGAATCC+TGG | - | chr1_3:71784840-71784859 | None:intergenic | 50.0% | |
| GGATTCCTTGACTGCTCTGA+AGG | + | chr1_3:71784840-71784859 | Msa0138650:intron | 50.0% | |
| ATCCTTTCACAAGGGTCAGG+CGG | - | chr1_3:71784888-71784907 | None:intergenic | 50.0% | |
| TCCATCCTTTCACAAGGGTC+AGG | - | chr1_3:71784891-71784910 | None:intergenic | 50.0% | |
| TGCCGACGTGAAAGCTTTCT+CGG | + | chr1_3:71785136-71785155 | Msa0138650:CDS | 50.0% | |
| CTCCGAGAAAGCTTTCACGT+CGG | - | chr1_3:71785141-71785160 | None:intergenic | 50.0% | |
| ! | GCTCTGTCTCTGAAAAGCCA+AGG | + | chr1_3:71785161-71785180 | Msa0138650:CDS | 50.0% |
| AGGCAACTTCATACTCCCCT+TGG | - | chr1_3:71785181-71785200 | None:intergenic | 50.0% | |
| ACACGAGTGAACATGCTCAC+AGG | - | chr1_3:71785201-71785220 | None:intergenic | 50.0% | |
| TCACTCGTGTTGTGTCCTCT+TGG | + | chr1_3:71785211-71785230 | Msa0138650:CDS | 50.0% | |
| ACCTTCCTCAGCTCCATAGA+CGG | - | chr1_3:71785448-71785467 | None:intergenic | 50.0% | |
| ! | GAGGAAGGTGGATTTGATCC+AGG | + | chr1_3:71785459-71785478 | Msa0138650:CDS | 50.0% |
| AAGTCGAGCCGCAAAGAATC+AGG | + | chr1_3:71785513-71785532 | Msa0138650:CDS | 50.0% | |
| CGAGCTGGGACTGATGAGAA+TGG | - | chr1_3:71778220-71778239 | None:intergenic | 55.0% | |
| !!! | GGTTGGGGTTTTGGGAGCTT+AGG | - | chr1_3:71778327-71778346 | None:intergenic | 55.0% |
| ! | GAGGCGGTTAGAGAGGGTTT+TGG | - | chr1_3:71778389-71778408 | None:intergenic | 55.0% |
| TTGAGGTGAGGAAACGGTGG+AGG | - | chr1_3:71778408-71778427 | None:intergenic | 55.0% | |
| CGAACTCTCCGCAAGCCAAT+CGG | - | chr1_3:71778560-71778579 | None:intergenic | 55.0% | |
| !! | CGATTGGCTTGCGGAGAGTT+CGG | + | chr1_3:71778558-71778577 | Msa0138650:CDS | 55.0% |
| !! | AAACGGATGAAGGCGTTGGG+TGG | + | chr1_3:71778691-71778710 | Msa0138650:CDS | 55.0% |
| GAGATGATTCCGTTGGGGGA+AGG | + | chr1_3:71778718-71778737 | Msa0138650:CDS | 55.0% | |
| ! | GGGGAAGGAGATGTTGATGG+TGG | + | chr1_3:71778733-71778752 | Msa0138650:CDS | 55.0% |
| !! | TGATGGTGGTGAGGTGGATG+AGG | + | chr1_3:71778747-71778766 | Msa0138650:intron | 55.0% |
| GTCTGATGAGGAGGAAGAGG+CGG | + | chr1_3:71778882-71778901 | Msa0138650:CDS | 55.0% | |
| ! | TTGCCGGTAAAGCACCTTCG+AGG | + | chr1_3:71778932-71778951 | Msa0138650:CDS | 55.0% |
| TTCGAGGAAGCTGGTGGCTA+CGG | + | chr1_3:71778948-71778967 | Msa0138650:CDS | 55.0% | |
| AAGTCACAGCTTCGAGGTCG+AGG | + | chr1_3:71779633-71779652 | Msa0138650:CDS | 55.0% | |
| !! | CGGTGTTGGTGCATCTAAGG+CGG | - | chr1_3:71781166-71781185 | None:intergenic | 55.0% |
| !! | GGTATCGATAACGGCGGTGT+TGG | - | chr1_3:71781180-71781199 | None:intergenic | 55.0% |
| !! | CACGGTCTCCGTTGATTCGT+TGG | - | chr1_3:71781225-71781244 | None:intergenic | 55.0% |
| CAACGAATCAACGGAGACCG+TGG | + | chr1_3:71781223-71781242 | Msa0138650:intron | 55.0% | |
| CAGCTTCTCTCTCACAGCCA+CGG | - | chr1_3:71781243-71781262 | None:intergenic | 55.0% | |
| CCTTGGATTGCGGTTAAGGG+AGG | - | chr1_3:71781710-71781729 | Msa0138660:CDS | 55.0% | |
| CCTCCCTTAACCGCAATCCA+AGG | + | chr1_3:71781707-71781726 | Msa0138650:intron | 55.0% | |
| TGGCGGCGTTATTGCATCTG+AGG | + | chr1_3:71782285-71782304 | Msa0138650:intron | 55.0% | |
| CGGCGTTATTGCATCTGAGG+TGG | + | chr1_3:71782288-71782307 | Msa0138650:intron | 55.0% | |
| ! | GGACGGAGGGAGTATGTTGT+TGG | + | chr1_3:71782668-71782687 | Msa0138650:intron | 55.0% |
| AATCAGGCCAGGTAGGCGAA+AGG | + | chr1_3:71783175-71783194 | Msa0138650:intron | 55.0% | |
| GATGGATCCTTTCGCCTACC+TGG | - | chr1_3:71783185-71783204 | None:intergenic | 55.0% | |
| !! | GTCTGGTCTTATCCAGTGGC+CGG | + | chr1_3:71783224-71783243 | Msa0138650:intron | 55.0% |
| !! | TCTGGTCTTATCCAGTGGCC+GGG | + | chr1_3:71783225-71783244 | Msa0138650:intron | 55.0% |
| CAGAGCTGTTGTTCGCGTGT+CGG | + | chr1_3:71783569-71783588 | Msa0138650:intron | 55.0% | |
| GCCTTCAGTTAATCGCTCCG+AGG | - | chr1_3:71784225-71784244 | None:intergenic | 55.0% | |
| TACCGCCTGACCCTTGTGAA+AGG | + | chr1_3:71784883-71784902 | Msa0138650:CDS | 55.0% | |
| GCCTGACCCTTGTGAAAGGA+TGG | + | chr1_3:71784887-71784906 | Msa0138650:CDS | 55.0% | |
| CTTTCACGTCGGCATGCCAA+GGG | - | chr1_3:71785130-71785149 | None:intergenic | 55.0% | |
| CGACGTGAAAGCTTTCTCGG+AGG | + | chr1_3:71785139-71785158 | Msa0138650:CDS | 55.0% | |
| GTCTATGGAGCTGAGGAAGG+TGG | + | chr1_3:71785447-71785466 | Msa0138650:CDS | 55.0% | |
| ! | CGAGGAGTGTGAGACGAGCT+GGG | - | chr1_3:71778234-71778253 | None:intergenic | 60.0% |
| ! | TTGTGGCGGAGAAGAGAGCG+AGG | - | chr1_3:71778252-71778271 | None:intergenic | 60.0% |
| ACGGTGGAGGCGGTTAGAGA+GGG | - | chr1_3:71778395-71778414 | None:intergenic | 60.0% | |
| AACGGTGGAGGCGGTTAGAG+AGG | - | chr1_3:71778396-71778415 | None:intergenic | 60.0% | |
| AGGTGAGGAAACGGTGGAGG+CGG | - | chr1_3:71778405-71778424 | None:intergenic | 60.0% | |
| CGAACCCGAAGATCTCCCCA+AGG | + | chr1_3:71778465-71778484 | Msa0138650:intron | 60.0% | |
| GGAAGACGGAAAACCACCGC+CGG | + | chr1_3:71778519-71778538 | Msa0138650:intron | 60.0% | |
| !! | TTGGCTTGCGGAGAGTTCGG+AGG | + | chr1_3:71778561-71778580 | Msa0138650:CDS | 60.0% |
| !! | GTATTCGGTGTCGGCAGTGG+AGG | + | chr1_3:71778628-71778647 | Msa0138650:CDS | 60.0% |
| !! | GGTGTCGGCAGTGGAGGTTA+TGG | + | chr1_3:71778634-71778653 | Msa0138650:CDS | 60.0% |
| TGAGGAGGAAGAGGCGGAGT+CGG | + | chr1_3:71778888-71778907 | Msa0138650:CDS | 60.0% | |
| AGCACCTTCGAGGAAGCTGG+TGG | + | chr1_3:71778942-71778961 | Msa0138650:CDS | 60.0% | |
| GTAGCCACCAGCTTCCTCGA+AGG | - | chr1_3:71778949-71778968 | None:intergenic | 60.0% | |
| GAAGCTGGTGGCTACGGTGA+AGG | + | chr1_3:71778954-71778973 | Msa0138650:CDS | 60.0% | |
| TCACAGCTTCGAGGTCGAGG+TGG | + | chr1_3:71779636-71779655 | Msa0138650:CDS | 60.0% | |
| CATGGAGGCAACCCCTAGCT+TGG | + | chr1_3:71780238-71780257 | Msa0138650:CDS | 60.0% | |
| !! | CGGCGGTGTTGGTGCATCTA+AGG | - | chr1_3:71781169-71781188 | None:intergenic | 60.0% |
| TGGGCCGTCAACCAAGGCAA+AGG | + | chr1_3:71781568-71781587 | Msa0138650:intron | 60.0% | |
| ATACTCCAGCACGCAAGGGG+AGG | - | chr1_3:71783461-71783480 | None:intergenic | 60.0% | |
| TCCCCTTGCGTGCTGGAGTA+TGG | + | chr1_3:71783460-71783479 | Msa0138650:intron | 60.0% | |
| GCCATACTCCAGCACGCAAG+GGG | - | chr1_3:71783464-71783483 | None:intergenic | 60.0% | |
| GGCCATACTCCAGCACGCAA+GGG | - | chr1_3:71783465-71783484 | None:intergenic | 60.0% | |
| ! | ATGGCCGAATTTGGTGGGGG+CGG | + | chr1_3:71783479-71783498 | Msa0138650:intron | 60.0% |
| CTTGCCGCCCCCACCAAATT+CGG | - | chr1_3:71783486-71783505 | None:intergenic | 60.0% | |
| ! | GAATTTGGTGGGGGCGGCAA+GGG | + | chr1_3:71783485-71783504 | Msa0138650:intron | 60.0% |
| GCAGTCGCCCCTTCTTCAGA+TGG | - | chr1_3:71784742-71784761 | None:intergenic | 60.0% | |
| TCAGGCGGTATACAGTGCGC+TGG | - | chr1_3:71784873-71784892 | None:intergenic | 60.0% | |
| GCTTTCACGTCGGCATGCCA+AGG | - | chr1_3:71785131-71785150 | None:intergenic | 60.0% | |
| ACATGGCTGCCACACCATCC+TGG | + | chr1_3:71785421-71785440 | Msa0138650:CDS | 60.0% | |
| CATGGCTGCCACACCATCCT+GGG | + | chr1_3:71785422-71785441 | Msa0138650:CDS | 60.0% | |
| ATAGACGGCCCAGGATGGTG+TGG | - | chr1_3:71785433-71785452 | None:intergenic | 60.0% | |
| ACACCATCCTGGGCCGTCTA+TGG | + | chr1_3:71785432-71785451 | Msa0138650:CDS | 60.0% | |
| GCCGTCTATGGAGCTGAGGA+AGG | + | chr1_3:71785444-71785463 | Msa0138650:CDS | 60.0% | |
| ! | GCGAGGAGTGTGAGACGAGC+TGG | - | chr1_3:71778235-71778254 | None:intergenic | 65.0% |
| !! | GCGGTATTCGGTGTCGGCAG+TGG | + | chr1_3:71778625-71778644 | Msa0138650:CDS | 65.0% |
| CATGGCTGGGCCGTCAACCA+AGG | + | chr1_3:71781562-71781581 | Msa0138650:intron | 65.0% | |
| ATAGTGACAGGCCCGGCCAC+TGG | - | chr1_3:71783239-71783258 | None:intergenic | 65.0% | |
| TCTTGCCTCCCCTTGCGTGC+TGG | + | chr1_3:71783453-71783472 | Msa0138650:intron | 65.0% | |
| CGGCCATACTCCAGCACGCA+AGG | - | chr1_3:71783466-71783485 | None:intergenic | 65.0% | |
| ! | CGAATTTGGTGGGGGCGGCA+AGG | + | chr1_3:71783484-71783503 | Msa0138650:intron | 65.0% |
| TGAAGAAGGGGCGACTGCGC+TGG | + | chr1_3:71784744-71784763 | Msa0138650:intron | 65.0% | |
| GCTCCATAGACGGCCCAGGA+TGG | - | chr1_3:71785438-71785457 | None:intergenic | 65.0% | |
| CTCAGCTCCATAGACGGCCC+AGG | - | chr1_3:71785442-71785461 | None:intergenic | 65.0% | |
| CTGGGCCGTCTATGGAGCTG+AGG | + | chr1_3:71785440-71785459 | Msa0138650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 71778214 | 71785956 | 71778214 | ID=Msa0138650;Name=Msa0138650 |
| chr1_3 | mRNA | 71778214 | 71785956 | 71778214 | ID=Msa0138650-mRNA-1;Parent=Msa0138650;Name=Msa0138650-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.7|0.63|1|0.6|0.54|11|135|605 |
| chr1_3 | exon | 71778214 | 71778412 | 71778214 | ID=Msa0138650-mRNA-1:exon:24959;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71778524 | 71778754 | 71778524 | ID=Msa0138650-mRNA-1:exon:24960;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71778812 | 71779047 | 71778812 | ID=Msa0138650-mRNA-1:exon:24961;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71779582 | 71779697 | 71779582 | ID=Msa0138650-mRNA-1:exon:24962;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71780235 | 71780410 | 71780235 | ID=Msa0138650-mRNA-1:exon:24963;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71784216 | 71784406 | 71784216 | ID=Msa0138650-mRNA-1:exon:24964;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71784488 | 71784574 | 71784488 | ID=Msa0138650-mRNA-1:exon:24965;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71784841 | 71784998 | 71784841 | ID=Msa0138650-mRNA-1:exon:24966;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71785094 | 71785304 | 71785094 | ID=Msa0138650-mRNA-1:exon:24967;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71785387 | 71785534 | 71785387 | ID=Msa0138650-mRNA-1:exon:24968;Parent=Msa0138650-mRNA-1 |
| chr1_3 | exon | 71785757 | 71785956 | 71785757 | ID=Msa0138650-mRNA-1:exon:24969;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71778214 | 71778412 | 71778214 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71778524 | 71778754 | 71778524 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71778812 | 71779047 | 71778812 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71779582 | 71779697 | 71779582 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71780235 | 71780410 | 71780235 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71784216 | 71784406 | 71784216 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71784488 | 71784574 | 71784488 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71784841 | 71784998 | 71784841 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71785094 | 71785304 | 71785094 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71785387 | 71785534 | 71785387 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | CDS | 71785757 | 71785821 | 71785757 | ID=Msa0138650-mRNA-1:cds;Parent=Msa0138650-mRNA-1 |
| chr1_3 | three_prime_UTR | 71785822 | 71785956 | 71785822 | ID=Msa0138650-mRNA-1:three_prime_utr;Parent=Msa0138650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
