AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0145560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145560 MtrunA17_Chr1g0154101 88.639 845 39 8 194 984 1 842 0.0 1477
Msa0145560 MtrunA17_Chr1g0154101 51.639 366 107 9 9 349 6 326 2.47e-97 326
Msa0145560 MtrunA17_Chr1g0154101 66.429 140 43 2 3 139 159 297 6.15e-50 190
Msa0145560 MtrunA17_Chr1g0154131 56.926 592 101 11 194 751 1 472 0.0 611
Msa0145560 MtrunA17_Chr1g0154131 42.272 537 176 11 1 464 1 476 3.12e-111 352
Msa0145560 MtrunA17_Chr1g0154131 31.915 282 166 5 691 971 216 472 2.34e-34 138
Msa0145560 MtrunA17_Chr1g0154071 55.330 591 120 11 199 753 9 491 0.0 561
Msa0145560 MtrunA17_Chr1g0154071 62.363 364 53 6 1 349 1 295 1.87e-137 421
Msa0145560 MtrunA17_Chr1g0154071 60.714 140 42 2 340 466 3 142 3.35e-44 167
Msa0145560 MtrunA17_Chr1g0154071 30.571 350 197 12 658 973 154 491 7.63e-33 134
Msa0145560 MtrunA17_Chr1g0154041 73.657 391 78 4 615 984 209 595 0.0 558
Msa0145560 MtrunA17_Chr1g0154041 31.624 117 78 2 217 332 15 130 9.91e-11 65.9
Msa0145560 MtrunA17_Chr1g0154211 55.305 443 98 8 349 756 7 384 9.65e-151 452
Msa0145560 MtrunA17_Chr1g0154211 72.500 160 31 2 201 348 6 164 1.08e-70 240
Msa0145560 MtrunA17_Chr1g0154211 61.728 162 40 2 8 147 3 164 9.72e-57 201
Msa0145560 MtrunA17_Chr1g0154211 31.161 353 167 8 691 979 56 396 4.47e-39 150
Msa0145560 MtrunA17_Chr1g0154191 46.939 441 118 9 349 756 6 363 9.48e-116 360
Msa0145560 MtrunA17_Chr1g0154191 70.732 164 36 1 198 349 2 165 1.01e-70 239
Msa0145560 MtrunA17_Chr1g0154191 41.734 369 141 12 8 313 2 359 8.00e-65 223
Msa0145560 MtrunA17_Chr1g0154191 39.697 330 149 6 691 984 56 371 5.50e-61 212
Msa0145560 MtrunA17_Chr1g0154171 48.718 429 116 6 349 756 7 352 5.02e-114 355
Msa0145560 MtrunA17_Chr1g0154171 68.944 161 31 3 201 349 6 159 1.65e-63 219
Msa0145560 MtrunA17_Chr1g0154171 39.722 360 139 10 11 311 6 346 2.80e-63 218
Msa0145560 MtrunA17_Chr1g0154171 37.607 351 185 6 658 984 20 360 4.90e-54 192
Msa0145560 MtrunA17_Chr1g0154111 36.391 676 258 17 4 617 6 571 1.28e-105 341
Msa0145560 MtrunA17_Chr1g0154111 46.560 436 131 13 349 758 10 369 7.93e-102 331
Msa0145560 MtrunA17_Chr1g0154111 73.373 169 31 3 194 349 1 168 1.35e-72 251
Msa0145560 MtrunA17_Chr1g0154111 31.153 321 173 8 691 976 60 367 3.17e-32 133
Msa0145560 MtrunA17_Chr1g0154241 55.521 317 69 6 346 637 3 272 6.52e-98 309
Msa0145560 MtrunA17_Chr1g0154241 72.050 161 32 2 198 346 2 161 8.72e-72 239
Msa0145560 MtrunA17_Chr1g0154241 74.809 131 30 1 12 139 6 136 3.78e-61 209
Msa0145560 MtrunA17_Chr1g0154151 44.665 403 100 10 378 756 19 322 1.43e-90 292
Msa0145560 MtrunA17_Chr1g0154151 39.073 302 160 8 686 977 36 323 2.65e-51 184
Msa0145560 MtrunA17_Chr1g0154151 37.377 305 153 10 42 313 19 318 1.20e-43 161
Msa0145560 MtrunA17_Chr1g0154151 60.465 129 28 2 233 349 19 136 1.10e-39 150
Msa0145560 MtrunA17_Chr1g0154251 42.404 441 163 18 339 737 5 396 8.16e-80 269
Msa0145560 MtrunA17_Chr1g0154251 65.318 173 40 4 197 350 6 177 6.93e-63 222
Msa0145560 MtrunA17_Chr1g0154251 69.118 136 39 1 3 135 2 137 4.61e-56 202
Msa0145560 MtrunA17_Chr1g0154161 44.000 300 126 6 201 458 13 312 3.75e-64 219
Msa0145560 MtrunA17_Chr1g0154161 43.505 331 139 13 5 313 8 312 2.03e-60 209
Msa0145560 MtrunA17_Chr1g0154161 73.881 134 21 2 349 468 14 147 5.47e-58 202
Msa0145560 MtrunA17_Chr1g0154161 43.434 297 129 9 691 984 64 324 1.05e-55 196
Msa0145560 MtrunA17_Chr1g0154161 46.154 195 79 3 571 756 139 316 4.59e-42 157
Msa0145560 MtrunA17_Chr1g0154121 67.470 83 25 1 676 756 1 83 2.93e-30 115
Msa0145560 MtrunA17_Chr1g0154121 47.475 99 42 2 896 984 2 100 4.82e-22 91.7
Msa0145560 MtrunA17_Chr6g0464121 63.415 82 27 2 673 753 117 196 4.35e-25 107
Msa0145560 MtrunA17_Chr6g0464121 44.776 67 36 1 899 965 122 187 4.41e-11 65.5
Msa0145560 MtrunA17_Chr7g0233561 24.476 286 149 9 216 439 16 296 2.99e-13 72.0
Msa0145560 MtrunA17_Chr3g0131891 33.708 89 59 0 216 304 17 105 1.12e-11 67.4
Msa0145560 MtrunA17_Chr7g0233571 34.444 90 59 0 213 302 5 94 3.83e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145560 AT4G33280.1 46.309 149 74 4 5 149 3 149 5.80e-35 137
Msa0145560 AT4G33280.1 32.423 293 139 6 204 439 11 301 6.67e-32 128
Msa0145560 AT4G33280.1 42.857 147 70 3 351 483 11 157 6.96e-31 125
Msa0145560 AT4G33280.2 46.897 145 70 5 5 145 3 144 8.78e-35 135
Msa0145560 AT4G33280.2 50.000 130 50 3 204 320 11 138 6.56e-32 126
Msa0145560 AT4G33280.2 39.264 163 79 3 351 493 11 173 2.42e-31 125
Msa0145560 AT4G33280.3 46.897 145 70 5 5 145 3 144 5.20e-34 135
Msa0145560 AT4G33280.3 50.000 130 50 3 204 320 11 138 7.03e-31 126
Msa0145560 AT4G33280.3 39.264 163 79 3 351 493 11 173 3.34e-30 124
Msa0145560 AT3G06220.1 30.769 104 68 1 232 331 23 126 1.29e-15 76.3
Msa0145560 AT3G06220.1 28.906 128 85 3 377 504 23 144 4.57e-13 68.9
Msa0145560 AT3G06220.1 29.524 105 70 2 28 129 11 114 1.16e-11 64.7
Msa0145560 AT4G34400.2 36.842 76 48 0 232 307 29 104 3.09e-14 76.3
Msa0145560 AT4G34400.2 36.000 100 58 3 28 123 17 114 3.38e-14 76.3
Msa0145560 AT4G34400.2 42.424 66 38 0 377 442 29 94 3.07e-13 73.2
Msa0145560 AT4G34400.1 36.842 76 48 0 232 307 29 104 3.09e-14 76.3
Msa0145560 AT4G34400.1 36.000 100 58 3 28 123 17 114 3.38e-14 76.3
Msa0145560 AT4G34400.1 42.424 66 38 0 377 442 29 94 3.07e-13 73.2
Msa0145560 AT3G06160.1 32.941 85 57 0 230 314 36 120 1.36e-12 70.5
Msa0145560 AT3G06160.1 27.966 118 82 1 365 482 26 140 8.27e-11 65.1
Msa0145560 AT3G06160.5 32.941 85 57 0 230 314 21 105 1.38e-12 70.5
Msa0145560 AT3G06160.5 27.966 118 82 1 365 482 11 125 9.49e-11 64.7
Msa0145560 AT3G06160.4 32.941 85 57 0 230 314 21 105 1.38e-12 70.5
Msa0145560 AT3G06160.4 27.966 118 82 1 365 482 11 125 9.49e-11 64.7
Msa0145560 AT3G06160.3 32.941 85 57 0 230 314 21 105 1.38e-12 70.5
Msa0145560 AT3G06160.3 27.966 118 82 1 365 482 11 125 9.49e-11 64.7
Msa0145560 AT3G06160.2 32.941 85 57 0 230 314 80 164 1.97e-12 70.5
Msa0145560 AT5G60130.3 35.398 113 60 3 232 339 1 105 6.40e-11 65.1
Msa0145560 AT5G60130.2 24.715 263 133 7 232 439 27 279 6.70e-11 65.1
Msa0145560 AT5G60130.5 34.483 116 63 3 230 340 25 132 6.72e-11 64.3
Msa0145560 AT3G18990.1 37.500 88 53 1 215 302 5 90 8.98e-11 65.1
Msa0145560 AT5G60130.4 35.398 113 60 3 232 339 24 128 9.70e-11 64.7
Msa0145560 AT3G18990.2 37.500 88 53 1 215 302 5 90 9.85e-11 65.5

Find 212 sgRNAs with CRISPR-Local

Find 1729 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACACCACCGGGACCTTTA+AGG 0.159160 1_4:+5247615 None:intergenic
GACTTCTTCAACAGAATTAT+TGG 0.172022 1_4:+5248710 None:intergenic
CAACTCCACTAGGACCTTTA+AGG 0.178570 1_4:+5248973 None:intergenic
GTGATGCACGTTCGTATATC+TGG 0.186351 1_4:-5243085 Msa0145560:CDS
CATTGGAGGAAATCATTTAT+TGG 0.196020 1_4:-5259019 Msa0145560:CDS
CGTGATAATGACATCAATTT+TGG 0.202243 1_4:-5243142 Msa0145560:CDS
TGAAATGAATGAACTGAAAA+TGG 0.212602 1_4:+5250434 None:intergenic
TAAATTGTCTGAAAATGTTT+TGG 0.223184 1_4:+5249022 None:intergenic
CCATCCATTTGTGAAGTAAA+TGG 0.223284 1_4:+5248917 None:intergenic
CGGTGGTGGTTTGAAGAAAT+TGG 0.224658 1_4:+5250410 None:intergenic
AACAAGTTGTCGTTCAAAAT+TGG 0.231202 1_4:+5257787 None:intergenic
TAACAGACTTCTTGGTCTTT+TGG 0.234122 1_4:+5246925 None:intergenic
CCAGAAAATGTGACCCTTAA+AGG 0.236805 1_4:-5247629 Msa0145560:CDS
CCAGCAAATGTGACACTTAA+AGG 0.237133 1_4:-5258139 Msa0145560:CDS
GGTGGTGTTGCATGGAAAAT+AGG 0.237795 1_4:-5247602 Msa0145560:CDS
CCAGACAATGTGACCCTTAA+AGG 0.245088 1_4:-5248987 Msa0145560:CDS
AAGTTGTTGCTTAAAATCTT+TGG 0.248017 1_4:+5248581 None:intergenic
AACTTCATTAACAGACTTCT+TGG 0.252529 1_4:+5246917 None:intergenic
CTGCCTTCCCACTTCTATTC+AGG 0.256160 1_4:+5245204 None:intergenic
GAAGGTCTTGATCATCAAAA+TGG 0.258424 1_4:-5243052 Msa0145560:CDS
TGAAATGGATGAACTGAAAA+TGG 0.274129 1_4:+5248616 None:intergenic
TGAAATGGATGAACTGAAAA+TGG 0.274129 1_4:+5258994 None:intergenic
TGTTGAACGTCCACGTATTC+TGG 0.284407 1_4:-5245060 Msa0145560:intron
CTTGGGAGAAAGAGATTTAC+TGG 0.286889 1_4:-5250459 Msa0145560:CDS
CGTATTTCATGTACATTTAG+TGG 0.287738 1_4:-5232775 Msa0145560:three_prime_UTR
TTACAAGTTGATGGTGAAAA+TGG 0.293113 1_4:+5258952 None:intergenic
AATGATTTCCTCCAATGATT+TGG 0.304701 1_4:+5259025 None:intergenic
CCTACCAACCAACCGGAAAA+AGG 0.307983 1_4:-5247139 Msa0145560:CDS
CCTTTAAGTGTCACATTTGC+TGG 0.308650 1_4:+5258139 None:intergenic
TATGGGCGGAAGACATTTAC+TGG 0.310032 1_4:-5257850 Msa0145560:CDS
ACTTGCATGCAATCTAGTTC+TGG 0.342898 1_4:+5244250 None:intergenic
CAAAATTGGTGTGAAGCAAT+AGG 0.343511 1_4:+5257801 None:intergenic
ATGTACATTTAGTGGCTTGA+TGG 0.344466 1_4:-5232767 Msa0145560:three_prime_UTR
AATGGGTGATGCTCAGAAAA+AGG 0.353180 1_4:+5258970 None:intergenic
CATGGGAGGAAGACATTTAC+TGG 0.353390 1_4:-5248641 Msa0145560:CDS
ATGTTTCTTCGGCATAAATC+TGG 0.355077 1_4:+5244025 None:intergenic
GCATAAATCTGGAAGTCTTA+TGG 0.355261 1_4:+5244036 None:intergenic
AGCGGAATTGTGTGGAATAT+AGG 0.359861 1_4:-5258112 Msa0145560:CDS
CCCCTAGTTCAGTTTGAGTA+TGG 0.362232 1_4:+5247393 None:intergenic
CCTTTAAGGGTCACATTGTC+TGG 0.362859 1_4:+5248987 None:intergenic
CGTGAACGTTGGCAGGTAGA+TGG 0.367101 1_4:+5242999 None:intergenic
AGTTGTTGCTTAAAATCTTT+GGG 0.367729 1_4:+5248582 None:intergenic
ATAATCTTTATCTTGCAGTT+TGG 0.369783 1_4:+5244317 None:intergenic
GTTGTTTCCCCTTGAACATA+TGG 0.370462 1_4:+5243202 None:intergenic
ATCAATGAGGTTGGAAAAGA+TGG 0.373789 1_4:-5244122 Msa0145560:CDS
CACAAGTTGTTGTTGAAAAT+CGG 0.381409 1_4:+5250390 None:intergenic
CTGGCGAGAGAGCAATTGAT+TGG 0.381570 1_4:-5246845 Msa0145560:CDS
CGACATCAGCTAATTGTTGT+TGG 0.381642 1_4:-5247100 Msa0145560:CDS
GCGGAATTGTGTGGAATATA+GGG 0.383233 1_4:-5258111 Msa0145560:CDS
CATTCAACACCGCCATTAGA+AGG 0.385293 1_4:+5248681 None:intergenic
TCCTTGTCTTTAAGTACAAT+GGG 0.391820 1_4:-5248854 Msa0145560:CDS
TGGGAAGAAGTTGGGTGAAA+TGG 0.393018 1_4:+5248601 None:intergenic
TAAAATCTTTGGGAAGAAGT+TGG 0.393785 1_4:+5248592 None:intergenic
TCCCTTGTTACACCCTTGTT+CGG 0.401229 1_4:+5248740 None:intergenic
AAAATCTTTGGGAAGAAGTT+GGG 0.404051 1_4:+5248593 None:intergenic
TACAGACATCTCCAATCTTT+AGG 0.410316 1_4:+5244183 None:intergenic
GTGGTGTTGCATGGAAAATA+GGG 0.415820 1_4:-5247601 Msa0145560:CDS
AAGGAAATCATTCTGCTTCA+AGG 0.417749 1_4:+5258024 None:intergenic
AACACCACCGGGACCTTTAA+GGG 0.419570 1_4:+5247616 None:intergenic
CAGGTGGAAGCAGCAAATCT+TGG 0.421511 1_4:-5250477 Msa0145560:CDS
TCCTCTGAGTTAAAGAAATC+CGG 0.424652 1_4:-5243924 Msa0145560:CDS
GATACCATTTACTTCACAAA+TGG 0.426840 1_4:-5248921 Msa0145560:CDS
CGAAGTATTTGAAGCTCTAC+CGG 0.428217 1_4:+5243905 None:intergenic
GTATCAGCTATGAACTGCTC+AGG 0.438283 1_4:+5247191 None:intergenic
TTTAACAAAATATGGAAAAG+AGG 0.438354 1_4:+5245100 None:intergenic
GAACGGTTGGCAACAATTCG+TGG 0.438781 1_4:-5258056 Msa0145560:CDS
TTCCTTGTCTTTAAGTACAA+TGG 0.443680 1_4:-5248855 Msa0145560:CDS
GTTGTTGGAGAGCACTTGAC+TGG 0.446323 1_4:-5247085 Msa0145560:CDS
TGTTGGAAGCACCAAATCAT+TGG 0.448194 1_4:-5259036 Msa0145560:CDS
CCCCGCTTCTTACTCCGGCC+AGG 0.453081 1_4:+5246891 None:intergenic
CCAACCGTCCACGAAGTAAA+CGG 0.457669 1_4:+5247559 None:intergenic
TGATGCACGTTCGTATATCT+GGG 0.458399 1_4:-5243084 Msa0145560:CDS
TATTCAACACCACCACTAGA+AGG 0.462152 1_4:+5257890 None:intergenic
GAAAAGAGGAGGTAAATGAT+TGG 0.467251 1_4:+5245114 None:intergenic
CAATGGTGAATCACACTTTG+AGG 0.476504 1_4:-5257990 Msa0145560:CDS
GAAGTCAATACTGCTTCTAA+TGG 0.478633 1_4:-5247335 Msa0145560:CDS
AACTCCACTAGGACCTTTAA+GGG 0.479312 1_4:+5248974 None:intergenic
GTCTTCCCCGCTTCTTACTC+CGG 0.480070 1_4:+5246886 None:intergenic
CTTGCATGCAATCTAGTTCT+GGG 0.481188 1_4:+5244251 None:intergenic
TCACAAACGTGAACGTTGGC+AGG 0.482732 1_4:+5242992 None:intergenic
TTGTTTCCCCTTGAACATAT+GGG 0.482916 1_4:+5243203 None:intergenic
GCCTGGCCGGAGTAAGAAGC+GGG 0.483099 1_4:-5246892 Msa0145560:CDS
CGTTCGAAGATGGGAGGAGC+AGG 0.483535 1_4:-5250496 Msa0145560:intron
CGTGTTCGCATCAATGAGGT+TGG 0.490884 1_4:-5244131 Msa0145560:CDS
AAGGTCTTGATCATCAAAAT+GGG 0.492524 1_4:-5243051 Msa0145560:CDS
GTTTCAACAGGTACAGCTAA+TGG 0.493162 1_4:+5247257 None:intergenic
AGGTGGAAGCAGCAAATCTT+GGG 0.493263 1_4:-5250476 Msa0145560:CDS
TTCCTTGTCTTTAATTACAA+TGG 0.493431 1_4:-5247497 Msa0145560:intron
AAAATTGGTGTGAAGCAATA+GGG 0.495077 1_4:+5257802 None:intergenic
GGAGATGTGCAGTAGAGAAC+TGG 0.495082 1_4:+5243290 None:intergenic
CTATTTACTTCACGAACGGT+TGG 0.500392 1_4:-5258069 Msa0145560:CDS
TGCATGTACTTACAAGTTGA+TGG 0.500840 1_4:+5258943 None:intergenic
AAAAGATGGGTTAGACTCCC+AGG 0.502465 1_4:-5244108 Msa0145560:intron
TGGAAATACTTTCTGTGAGA+AGG 0.503331 1_4:-5257954 Msa0145560:CDS
TCAAATACTTCGAAGAAGGC+AGG 0.504134 1_4:-5243894 Msa0145560:CDS
GATTATTCTTCATAATTTGA+AGG 0.504582 1_4:-5244300 Msa0145560:CDS
CGTGGCAATAGCCTAAAGAT+TGG 0.505082 1_4:-5244194 Msa0145560:CDS
CCGTTTACTTCGTGGACGGT+TGG 0.508441 1_4:-5247559 Msa0145560:CDS
AACTCCGTCCCATATGTTCA+AGG 0.509291 1_4:-5243211 Msa0145560:CDS
GAAGTCAGTACTCCTTCTAA+TGG 0.509411 1_4:-5248693 Msa0145560:CDS
AAAAGAGGAGGTAAATGATT+GGG 0.509472 1_4:+5245115 None:intergenic
GTGGAGTTGTGTGGAATGTC+GGG 0.511439 1_4:-5248959 Msa0145560:CDS
ATTATTCTTCATAATTTGAA+GGG 0.512712 1_4:-5244299 Msa0145560:CDS
TTCATTCATTCATTCATGGA+AGG 0.513196 1_4:-5259071 None:intergenic
GCCATACTCAAACTGAACTA+GGG 0.513331 1_4:-5247394 Msa0145560:CDS
GGCCATACTCAAACTGAACT+AGG 0.514000 1_4:-5247395 Msa0145560:CDS
CACGTTCGTATATCTGGGGT+TGG 0.517076 1_4:-5243079 Msa0145560:CDS
AGACGATACCGTTTACTTCG+TGG 0.517967 1_4:-5247567 Msa0145560:CDS
TTCCTTGTATTTAAGTACAA+TGG 0.518389 1_4:-5258007 Msa0145560:intron
CAGTTTCCCTACCAACCAAC+CGG 0.519266 1_4:-5247146 Msa0145560:CDS
AGGAAACACCATGTTGATGA+TGG 0.520128 1_4:-5243557 Msa0145560:CDS
CCCCATTGTACTTAAAGACA+AGG 0.522025 1_4:+5248853 None:intergenic
AGTGGAGTTGTGTGGAATGT+CGG 0.523559 1_4:-5248960 Msa0145560:CDS
TCTGTTAATGAAGTTACGCC+TGG 0.524578 1_4:-5246909 Msa0145560:CDS
ATGAAAGTGACTCTAATAGT+TGG 0.526467 1_4:+5232832 None:intergenic
GTGAACGTTGGCAGGTAGAT+GGG 0.528289 1_4:+5243000 None:intergenic
CTTCCCACTTCTATTCAGGA+TGG 0.529191 1_4:+5245208 None:intergenic
TGGCGAGAGAGCAATTGATT+GGG 0.530749 1_4:-5246844 Msa0145560:CDS
GTAACTTCTGTATTGCAAGC+AGG 0.534058 1_4:+5243268 None:intergenic
GAAATGAATGAACTGAAAAT+GGG 0.535326 1_4:+5250435 None:intergenic
GAAGGAACTCAAAACTGTGT+TGG 0.539105 1_4:-5259053 Msa0145560:CDS
GGACAAGCTCATACCGAACA+AGG 0.541726 1_4:-5248753 Msa0145560:CDS
CACCATTGTAATTAAAGACA+AGG 0.542064 1_4:+5247495 None:intergenic
TATCAGCTATGAACTGCTCA+GGG 0.548226 1_4:+5247192 None:intergenic
TTAATGAAGTTACGCCTGGC+CGG 0.549314 1_4:-5246905 Msa0145560:CDS
AAGGTCCCGGTGGTGTTGCA+TGG 0.549921 1_4:-5247610 Msa0145560:CDS
TCGTATATCTGGGGTTGGAA+AGG 0.555220 1_4:-5243074 Msa0145560:CDS
TCTAATGGTGGTGTTGAATG+TGG 0.555737 1_4:-5247320 Msa0145560:intron
CCATTTACTTCACAAATGGA+TGG 0.556295 1_4:-5248917 Msa0145560:CDS
AGCTTCAAATACTTCGAAGA+AGG 0.556522 1_4:-5243898 Msa0145560:CDS
TACAAGTTGATGGTGAAAAT+GGG 0.558290 1_4:+5258953 None:intergenic
AATAGAAGTGGGAAGGCAGA+TGG 0.559991 1_4:-5245200 Msa0145560:CDS
TTTCAAACTATCATTAGCCT+GGG 0.560665 1_4:+5243526 None:intergenic
AGTTCTGGGAACAGAATTGA+CGG 0.562112 1_4:+5244265 None:intergenic
ATATCTGGGGTTGGAAAGGA+AGG 0.562175 1_4:-5243070 Msa0145560:CDS
GATACTATTTACTTCACGAA+CGG 0.565840 1_4:-5258073 Msa0145560:CDS
TGATTGGGTGGCTTGTAACA+AGG 0.569869 1_4:-5246829 Msa0145560:CDS
GAAATGGATGAACTGAAAAT+GGG 0.570637 1_4:+5248617 None:intergenic
GAAATGGATGAACTGAAAAT+GGG 0.570637 1_4:+5258995 None:intergenic
GCTATCTCTTTCTCATCATG+TGG 0.571214 1_4:+5245137 None:intergenic
GTTACGCTTCGCAATTCAAG+AGG 0.575759 1_4:-5243250 Msa0145560:CDS
AGTGGCTTGATGGATAAACT+AGG 0.577407 1_4:-5232757 Msa0145560:three_prime_UTR
AATGTGACCCTTAAAGGTCC+CGG 0.577654 1_4:-5247623 Msa0145560:CDS
ATGAAGAAGTTCAATGTCTG+TGG 0.577831 1_4:-5243431 Msa0145560:CDS
AAGCTCCACTGAGAATATCA+TGG 0.579465 1_4:+5245177 None:intergenic
TTGGAGAGCACTTGACTGGG+TGG 0.581287 1_4:-5247081 Msa0145560:CDS
CGAGAGAGCAATTGATTGGG+TGG 0.581381 1_4:-5246841 Msa0145560:CDS
ACATTCCACACAACTCCACT+AGG 0.582408 1_4:+5248963 None:intergenic
CAAATACTTCGAAGAAGGCA+GGG 0.582811 1_4:-5243893 Msa0145560:CDS
TCATCAACATGGTGTTTCCT+CGG 0.584118 1_4:+5243560 None:intergenic
AACAAAATATGGAAAAGAGG+AGG 0.585641 1_4:+5245103 None:intergenic
CGCCTGGCCGGAGTAAGAAG+CGG 0.586085 1_4:-5246893 Msa0145560:CDS
TTGTTGGAGAGCACTTGACT+GGG 0.586591 1_4:-5247084 Msa0145560:CDS
TTTCACAAAATATGGAAATG+GGG 0.587903 1_4:+5243457 None:intergenic
GTCACATTCTATGCGGAGGA+TGG 0.588116 1_4:-5244229 Msa0145560:CDS
CTCCGTCCCATATGTTCAAG+GGG 0.588313 1_4:-5243209 Msa0145560:CDS
TACCGAACAAGGGTGTAACA+AGG 0.588541 1_4:-5248742 Msa0145560:CDS
TAACTTCTGTATTGCAAGCA+GGG 0.589388 1_4:+5243269 None:intergenic
TGGAAGCACCAAATCATTGG+AGG 0.590720 1_4:-5259033 Msa0145560:CDS
TGTGCAGTAGAGAACTGGCA+TGG 0.592258 1_4:+5243295 None:intergenic
ACCGGATTTCTTTAACTCAG+AGG 0.593709 1_4:+5243923 None:intergenic
GTCAATACTGCTTCTAATGG+TGG 0.593959 1_4:-5247332 Msa0145560:CDS
GATGTCATTATCACGAACAA+AGG 0.594099 1_4:+5243150 None:intergenic
GCAGCCATCCTGAATAGAAG+TGG 0.595897 1_4:-5245212 Msa0145560:CDS
GCAATTCAAGAGGCAAACGT+TGG 0.600695 1_4:-5243240 Msa0145560:CDS
TTCCCCTTGAACATATGGGA+CGG 0.601024 1_4:+5243207 None:intergenic
TCGAAGATGGGAGGAGCAGG+TGG 0.601163 1_4:-5250493 Msa0145560:intron
AATCATTCTGCTTCAAGGAG+TGG 0.605301 1_4:+5258029 None:intergenic
TTGTTGTTGAAAATCGGTGG+TGG 0.608194 1_4:+5250396 None:intergenic
GCTTATAACAAGCAACACTC+AGG 0.608918 1_4:-5247059 Msa0145560:intron
ACTCCGTCCCATATGTTCAA+GGG 0.617467 1_4:-5243210 Msa0145560:CDS
TTCTGATGTAGTCACTATAG+CGG 0.623932 1_4:-5246967 Msa0145560:intron
AAGGTCCTAGCGGAATTGTG+TGG 0.623981 1_4:-5258120 Msa0145560:CDS
AAGGTCCTAGTGGAGTTGTG+TGG 0.624686 1_4:-5248968 Msa0145560:CDS
TGATGATGGACTAAGCTCCC+AGG 0.628271 1_4:-5243543 Msa0145560:CDS
CATCCTGAATAGAAGTGGGA+AGG 0.628564 1_4:-5245207 Msa0145560:CDS
ATATTCCACACAATTCCGCT+AGG 0.630389 1_4:+5258115 None:intergenic
GTGACCCTTAAAGGTCCTAG+TGG 0.630968 1_4:-5248978 Msa0145560:CDS
GAACAACTCACCAGAATACG+TGG 0.631909 1_4:+5245050 None:intergenic
GTCTTGCGTTCGAAGATGGG+AGG 0.632969 1_4:-5250502 Msa0145560:intron
CCATACTCAAACTGAACTAG+GGG 0.634393 1_4:-5247393 Msa0145560:CDS
ATTACGTGTTCGCATCAATG+AGG 0.634490 1_4:-5244135 Msa0145560:CDS
GCTCATAGTCCTTCTAGTGG+TGG 0.637685 1_4:-5257899 Msa0145560:CDS
GTCAGTACTCCTTCTAATGG+CGG 0.637844 1_4:-5248690 Msa0145560:CDS
GCTTGTAACAAGGAAAACTC+AGG 0.638956 1_4:-5246819 Msa0145560:intron
TTTCTCACAAACGTGAACGT+TGG 0.639552 1_4:+5242988 None:intergenic
CAGCCATCCTGAATAGAAGT+GGG 0.642084 1_4:-5245211 Msa0145560:CDS
AATATAGGGCTTACAACTAG+AGG 0.644207 1_4:-5258097 Msa0145560:CDS
TCAATGAGGTTGGAAAAGAT+GGG 0.644296 1_4:-5244121 Msa0145560:CDS
AGCTTAGTCCATCATCAACA+TGG 0.648752 1_4:+5243549 None:intergenic
GCAAGTCACATTCTATGCGG+AGG 0.649025 1_4:-5244233 Msa0145560:CDS
GTAGGGAAACTGTATAGCTG+TGG 0.649466 1_4:+5247157 None:intergenic
ATAATTTGAAGGGAGAACAG+TGG 0.652096 1_4:-5244289 Msa0145560:CDS
ACCGAACAAGGGTGTAACAA+GGG 0.656770 1_4:-5248741 Msa0145560:CDS
GTGCAGTAGAGAACTGGCAT+GGG 0.660376 1_4:+5243296 None:intergenic
CCTTGTCTTTAAGTACAATG+GGG 0.669263 1_4:-5248853 Msa0145560:CDS
CAATGAAGATGTATATGTTG+TGG 0.673119 1_4:-5242951 Msa0145560:three_prime_UTR
CAAGCTCATAGTCCTTCTAG+TGG 0.677099 1_4:-5257902 Msa0145560:CDS
GACAAGCTCATACCGAACAA+GGG 0.681015 1_4:-5248752 Msa0145560:CDS
GATACCGTTTACTTCGTGGA+CGG 0.682240 1_4:-5247563 Msa0145560:CDS
AAGTTGTTGTTGAAAATCGG+TGG 0.686571 1_4:+5250393 None:intergenic
GTGACACTTAAAGGTCCTAG+CGG 0.686784 1_4:-5258130 Msa0145560:CDS
GATGGCCATGATATTCTCAG+TGG 0.691057 1_4:-5245182 Msa0145560:CDS
TGTCTGTGGATCATACACTT+TGG 0.709889 1_4:-5243417 Msa0145560:intron
GTGACCCTTAAAGGTCCCGG+TGG 0.715661 1_4:-5247620 Msa0145560:CDS
CCTGGCCGGAGTAAGAAGCG+GGG 0.719494 1_4:-5246891 Msa0145560:CDS
AAACAAAGACAGCTGTACCG+AGG 0.720792 1_4:-5243577 Msa0145560:intron
GATGCACGTTCGTATATCTG+GGG 0.734162 1_4:-5243083 Msa0145560:CDS
CATGCAAGTCACATTCTATG+CGG 0.736069 1_4:-5244236 Msa0145560:CDS
ATCAGCTATGAACTGCTCAG+GGG 0.739451 1_4:+5247193 None:intergenic
AATCAGCTCAAAGTGCAGTG+CGG 0.745608 1_4:-5244000 Msa0145560:CDS
CATACTCAAACTGAACTAGG+GGG 0.777970 1_4:-5247392 Msa0145560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAAATTTAAT+TGG + chr1_4:5255377-5255396 None:intergenic 0.0%
!!! AAATTTTTTTTTTTTTAAAT+AGG - chr1_4:5255380-5255399 Msa0145560:intron 0.0%
!! TAAAAAAAATAGAAAAATGA+CGG + chr1_4:5234175-5234194 None:intergenic 10.0%
!!! TCATTTTTCTATTTTTTTTA+GGG - chr1_4:5234175-5234194 Msa0145560:intron 10.0%
!!! TTTTTTTGATTTTTTTTTCT+GGG + chr1_4:5234463-5234482 None:intergenic 10.0%
!!! ATTTTTTTGATTTTTTTTTC+TGG + chr1_4:5234464-5234483 None:intergenic 10.0%
!! TATTAAAAACATGAAAAAAA+AGG + chr1_4:5235432-5235451 None:intergenic 10.0%
!!! GTTTTTTTTAAAAAAACTAA+CGG - chr1_4:5235493-5235512 Msa0145560:intron 10.0%
!!! AAGATAAAAATTTAAAATGT+GGG + chr1_4:5235650-5235669 None:intergenic 10.0%
!!! AAAGATAAAAATTTAAAATG+TGG + chr1_4:5235651-5235670 None:intergenic 10.0%
!!! TTATTGTTGTTTTTAAATAA+TGG - chr1_4:5235816-5235835 Msa0145560:intron 10.0%
!!! TATTGTTGTTTTTAAATAAT+GGG - chr1_4:5235817-5235836 Msa0145560:intron 10.0%
!! AAATATAAATAGAAAAAAGA+AGG + chr1_4:5243373-5243392 None:intergenic 10.0%
!! TAAAAAAAAAATTAAAAGGT+GGG + chr1_4:5243407-5243426 None:intergenic 10.0%
!! ATAAAAAAAAAATTAAAAGG+TGG + chr1_4:5243408-5243427 None:intergenic 10.0%
!! TGTATAAAATATAATAATCA+TGG + chr1_4:5235793-5235812 None:intergenic 10.0%
!!! TTTCTTAGAAATAAAATTTT+GGG + chr1_4:5245992-5246011 None:intergenic 10.0%
!!! TTCATTATTTTAACAAAATA+TGG + chr1_4:5246720-5246739 None:intergenic 10.0%
!!! TTTTTTGTTTTAAGTTTATT+TGG - chr1_4:5247338-5247357 Msa0145560:CDS 10.0%
!!! TTTTTGTTTTAAGTTTATTT+GGG - chr1_4:5247339-5247358 Msa0145560:CDS 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr1_4:5250164-5250183 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr1_4:5250165-5250184 None:intergenic 10.0%
!!! TTTTTTAATAAATAGTTTAG+TGG - chr1_4:5250641-5250660 Msa0145560:intron 10.0%
!! AAATAAGAAAAAATTGAAAA+AGG + chr1_4:5251239-5251258 None:intergenic 10.0%
!! AAAGATAAAAAAATTCAAAA+AGG + chr1_4:5251571-5251590 None:intergenic 10.0%
!!! TTGATTATTTTAACAAAATA+TGG + chr1_4:5253418-5253437 None:intergenic 10.0%
!! TTAAAAAAAAAACATAACAT+GGG + chr1_4:5255280-5255299 None:intergenic 10.0%
!! TTTAAAAAAAAAACATAACA+TGG + chr1_4:5255281-5255300 None:intergenic 10.0%
!!! AAATTGTTTTTTTTTTTTTG+AGG + chr1_4:5255565-5255584 None:intergenic 10.0%
!!! TTTTTAAAATCTATAACAAA+CGG - chr1_4:5255660-5255679 Msa0145560:intron 10.0%
!!! TATTATTTTTTTGAGAAACA+TGG + chr1_4:5233538-5233557 None:intergenic 15.0%
!!! GTCATTTTTCTATTTTTTTT+AGG - chr1_4:5234174-5234193 Msa0145560:intron 15.0%
!!! CGTTTTTTTAAAAAAACTAA+CGG + chr1_4:5234315-5234334 None:intergenic 15.0%
!! TTTGAAAAGGTTAAATTTAT+GGG + chr1_4:5234595-5234614 None:intergenic 15.0%
!! CAAAGAAAACAAAAAATTAA+AGG - chr1_4:5234691-5234710 Msa0145560:intron 15.0%
!! TAGATTAAAAGATCAAAAAT+AGG - chr1_4:5234716-5234735 Msa0145560:intron 15.0%
!!! AATAATTATGTTTAGCTTTT+CGG - chr1_4:5236088-5236107 Msa0145560:intron 15.0%
!! TTTAATATCGTAAAAGTTAA+TGG + chr1_4:5236754-5236773 None:intergenic 15.0%
!!! TTAACTTTTACGATATTAAA+TGG - chr1_4:5236754-5236773 Msa0145560:intron 15.0%
!! TTTACTTAAAAATGACATAT+CGG - chr1_4:5237009-5237028 Msa0145560:intron 15.0%
!!! AAAATTGATTTATTTGAACT+AGG + chr1_4:5237035-5237054 None:intergenic 15.0%
!! GTATATTAAAAATCACAAAA+GGG + chr1_4:5237846-5237865 None:intergenic 15.0%
!! AATATGATAACAATAACAAT+TGG + chr1_4:5237920-5237939 None:intergenic 15.0%
!!! TTCAAATTTTGAAGAAAAAT+CGG + chr1_4:5238175-5238194 None:intergenic 15.0%
!!! ATTTTTCTTCAAAATTTGAA+GGG - chr1_4:5238175-5238194 Msa0145560:intron 15.0%
!! TGAAAATATTTAAGTGAATT+GGG + chr1_4:5241157-5241176 None:intergenic 15.0%
!! AGATACAAAATTTAAAAAGT+GGG + chr1_4:5241488-5241507 None:intergenic 15.0%
!! AAGATACAAAATTTAAAAAG+TGG + chr1_4:5241489-5241508 None:intergenic 15.0%
!!! ATATGCTTGTTTTTAAATAA+TGG - chr1_4:5243730-5243749 Msa0145560:intron 15.0%
!!! TATGCTTGTTTTTAAATAAT+GGG - chr1_4:5243731-5243750 Msa0145560:intron 15.0%
!! TTAATATAGTAAAAGTTAAG+TGG + chr1_4:5244796-5244815 None:intergenic 15.0%
!!! AAAATAACATACTTTTTGAT+AGG - chr1_4:5245491-5245510 Msa0145560:intron 15.0%
!!! AAATAACATACTTTTTGATA+GGG - chr1_4:5245492-5245511 Msa0145560:intron 15.0%
!!! GTTTCTTAGAAATAAAATTT+TGG + chr1_4:5245993-5246012 None:intergenic 15.0%
!!! AAGAACTAATTTGTTTAAAT+AGG - chr1_4:5246322-5246341 Msa0145560:intron 15.0%
!! ATAAAAGTAGAAATATTGTT+TGG + chr1_4:5246912-5246931 None:intergenic 15.0%
!!! AATATTTCTACTTTTATGTA+TGG - chr1_4:5246915-5246934 Msa0145560:CDS 15.0%
!! AAAACAAAAAATATTTGAGA+AGG + chr1_4:5247329-5247348 None:intergenic 15.0%
!! ATTATTCTTCATAATTTGAA+GGG - chr1_4:5247510-5247529 Msa0145560:CDS 15.0%
!!! GAAGAATATAATTCAATTTT+CGG - chr1_4:5248092-5248111 Msa0145560:intron 15.0%
!!! TTTTTTTTTGTTTTTGACAT+TGG - chr1_4:5249175-5249194 Msa0145560:intron 15.0%
!! AGTATTAATTAGAGTTATAT+TGG + chr1_4:5250105-5250124 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr1_4:5250163-5250182 None:intergenic 15.0%
!!! TATTTTTCCTAATATTTAGT+AGG + chr1_4:5250276-5250295 None:intergenic 15.0%
!!! ATTGATTTCAATGATAAAAT+TGG + chr1_4:5250712-5250731 None:intergenic 15.0%
!!! ATTATTGGTTATATAGTTTA+GGG - chr1_4:5251335-5251354 Msa0145560:intron 15.0%
!!! ATATGCTTGTTTTTAAATAA+TGG - chr1_4:5243730-5243749 Msa0145560:intron 15.0%
!!! TTAGTTCATTTTAATAGTTT+AGG - chr1_4:5251493-5251512 Msa0145560:intron 15.0%
!!! TAGTTCATTTTAATAGTTTA+GGG - chr1_4:5251494-5251513 Msa0145560:intron 15.0%
!! ATAAAAAAATTCAAAAAGGT+GGG + chr1_4:5251567-5251586 None:intergenic 15.0%
!! ATAAATTAAGAATCACAAAA+GGG + chr1_4:5253482-5253501 None:intergenic 15.0%
!! TATAAATTAAGAATCACAAA+AGG + chr1_4:5253483-5253502 None:intergenic 15.0%
!! ATTATTCTTCATAATATGAA+GGG - chr1_4:5254151-5254170 Msa0145560:intron 15.0%
!! TAGTTAATCATTAGTTAATT+GGG + chr1_4:5255006-5255025 None:intergenic 15.0%
!! ATAGTTAATCATTAGTTAAT+TGG + chr1_4:5255007-5255026 None:intergenic 15.0%
!!! TTTTTTTTTTTAAATAGGCA+AGG - chr1_4:5255385-5255404 Msa0145560:intron 15.0%
!!! TTTTTTTTTTAAATAGGCAA+GGG - chr1_4:5255386-5255405 Msa0145560:intron 15.0%
!!! AGTAAACCAATTTTTTTAAA+TGG + chr1_4:5255686-5255705 None:intergenic 15.0%
!!! AAAAATTGGTTTACTTTTTT+AGG - chr1_4:5255691-5255710 Msa0145560:intron 15.0%
!!! AAAATTGGTTTACTTTTTTA+GGG - chr1_4:5255692-5255711 Msa0145560:intron 15.0%
!! TATAAATACAAATTTCACAA+CGG + chr1_4:5255832-5255851 None:intergenic 15.0%
!! AAAATAAGTCTCATATAAAA+TGG + chr1_4:5255932-5255951 None:intergenic 15.0%
!! TTTGACAAAAAAAAGAAAAT+GGG - chr1_4:5255966-5255985 Msa0145560:intron 15.0%
!! ATAAAAATAAGACAACAATA+AGG - chr1_4:5256061-5256080 Msa0145560:intron 15.0%
!!! ACACAATTACTTTAAAATAA+GGG + chr1_4:5257928-5257947 None:intergenic 15.0%
!!! TACACAATTACTTTAAAATA+AGG + chr1_4:5257929-5257948 None:intergenic 15.0%
!!! ATAATTTGTATATTTCCTTT+TGG + chr1_4:5258453-5258472 None:intergenic 15.0%
!! AATTATTCTTCATAATTTGA+AGG - chr1_4:5258467-5258486 Msa0145560:intron 15.0%
!! ATTATTCTTCATAATTTGAA+GGG - chr1_4:5247510-5247529 Msa0145560:CDS 15.0%
!! AGATACAAAATTTAAGAGAT+GGG + chr1_4:5232909-5232928 None:intergenic 20.0%
!! AAGATACAAAATTTAAGAGA+TGG + chr1_4:5232910-5232929 None:intergenic 20.0%
!!! CATATTTTTAAAACTCCTTT+AGG - chr1_4:5233043-5233062 Msa0145560:intron 20.0%
!!! CTCTAGATAAATGTTTTTTT+TGG + chr1_4:5233488-5233507 None:intergenic 20.0%
!!! AAAAAACATTTATCTAGAGT+AGG - chr1_4:5233489-5233508 Msa0145560:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+CGG + chr1_4:5233637-5233656 None:intergenic 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_4:5233835-5233854 Msa0145560:intron 20.0%
!!! TCATATTTTGTTCAAAAATG+TGG - chr1_4:5233883-5233902 Msa0145560:intron 20.0%
!!! GTTTTTATTTTTCATTCATG+TGG + chr1_4:5234100-5234119 None:intergenic 20.0%
!!! TTTCTAAAGTGTTCATATTT+GGG - chr1_4:5234126-5234145 Msa0145560:intron 20.0%
!!! TTTTAAAAAAACTAACGGAA+GGG + chr1_4:5235498-5235517 None:intergenic 20.0%
!!! TTTTTAAAAAAACTAACGGA+AGG + chr1_4:5235497-5235516 None:intergenic 20.0%
!!! CTTTGAAAAGGTTAAATTTA+TGG + chr1_4:5234596-5234615 None:intergenic 20.0%
!! TTTGAAGATGAAGATTAAAA+GGG + chr1_4:5234633-5234652 None:intergenic 20.0%
!!! TTTTGAAGATGAAGATTAAA+AGG + chr1_4:5234634-5234653 None:intergenic 20.0%
!! AAGAAATATGACAATTGATT+TGG - chr1_4:5235315-5235334 Msa0145560:intron 20.0%
!! ATGTCTCAATTTATAAATGA+TGG - chr1_4:5235401-5235420 Msa0145560:intron 20.0%
!!! TTTTTAAAAAAACTAACGGA+AGG - chr1_4:5235497-5235516 Msa0145560:intron 20.0%
!!! TTTTAAAAAAACTAACGGAA+GGG - chr1_4:5235498-5235517 Msa0145560:intron 20.0%
!! AAAGAACTAAATGCATTTAA+AGG + chr1_4:5235682-5235701 None:intergenic 20.0%
!!! AATAATGAGCTTTTGATTAT+TGG - chr1_4:5235739-5235758 Msa0145560:intron 20.0%
!!! TTATTATTCTTTTCCTTGTT+CGG - chr1_4:5236008-5236027 Msa0145560:intron 20.0%
!! TAATGTTTCTTAATCTCATT+TGG - chr1_4:5236154-5236173 Msa0145560:intron 20.0%
!!! GAAATTTATACTTTTATTGC+AGG - chr1_4:5236176-5236195 Msa0145560:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_4:5233637-5233656 None:intergenic 20.0%
!!! AGAAAGAAATATTTTAACCT+GGG + chr1_4:5236728-5236747 None:intergenic 20.0%
!!! AAGAAAGAAATATTTTAACC+TGG + chr1_4:5236729-5236748 None:intergenic 20.0%
!! CAAAGTTAACCAAAAAAAAA+TGG + chr1_4:5236879-5236898 None:intergenic 20.0%
!! ATCAAATGAAAAAAGAAAAG+TGG + chr1_4:5236911-5236930 None:intergenic 20.0%
!!! TGTTTATGTTGATGATATTA+AGG + chr1_4:5237382-5237401 None:intergenic 20.0%
!! AATCATGAGTTACAAATAAA+AGG + chr1_4:5237618-5237637 None:intergenic 20.0%
!! TTTAACAAAATATGGAAATG+AGG + chr1_4:5237774-5237793 None:intergenic 20.0%
!! GGTATATTAAAAATCACAAA+AGG + chr1_4:5237847-5237866 None:intergenic 20.0%
!!! CAATAAAAAATTTTAAGCGA+AGG + chr1_4:5237945-5237964 None:intergenic 20.0%
!!! GTTTCCTATTTAAAGTTTAT+TGG - chr1_4:5238002-5238021 Msa0145560:intron 20.0%
!!! GATTTTTCTTCAAAATTTGA+AGG - chr1_4:5238174-5238193 Msa0145560:intron 20.0%
!! TATAAAACTAACACATCATA+AGG - chr1_4:5238455-5238474 Msa0145560:intron 20.0%
!!! CACATAATAAAGGTATTTAA+AGG - chr1_4:5238498-5238517 Msa0145560:intron 20.0%
!! GAAAGAGATAAATTGAAATT+CGG + chr1_4:5238600-5238619 None:intergenic 20.0%
!! CTTAAATATATTGCTTTCTT+AGG - chr1_4:5238952-5238971 Msa0145560:intron 20.0%
!! AGCAATATACATTATATCAA+TGG - chr1_4:5239189-5239208 Msa0145560:intron 20.0%
!! TTAACATAAACTAGAAAGAA+AGG + chr1_4:5239603-5239622 None:intergenic 20.0%
!!! TTTTTTAATAATAAGAGGGA+TGG + chr1_4:5239701-5239720 None:intergenic 20.0%
!!! ATATTGACGATGATTTTTTA+TGG - chr1_4:5239833-5239852 Msa0145560:intron 20.0%
!! ATATTGATCAATTTCCTATT+AGG - chr1_4:5239886-5239905 Msa0145560:intron 20.0%
!! GACTATAAATTATATGAGAA+AGG + chr1_4:5240594-5240613 None:intergenic 20.0%
!! TGTCCTTTCAAAAAAAATTA+TGG + chr1_4:5240619-5240638 None:intergenic 20.0%
!! TAAAATTAAAACAGTGTCTT+GGG - chr1_4:5240840-5240859 Msa0145560:intron 20.0%
!! CTGAAAATATTTAAGTGAAT+TGG + chr1_4:5241158-5241177 None:intergenic 20.0%
!!! CACTTAAATATTTTCAGTTT+TGG - chr1_4:5241161-5241180 Msa0145560:intron 20.0%
!! CTGTTAATGTTATTCAATAA+TGG - chr1_4:5241576-5241595 Msa0145560:intron 20.0%
!!! TATATATTTTACTCGTTCAT+AGG - chr1_4:5241905-5241924 Msa0145560:intron 20.0%
!! GAAATCTATAAATTTATTGC+AGG - chr1_4:5242758-5242777 Msa0145560:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+GGG + chr1_4:5233637-5233656 None:intergenic 20.0%
!!! TAAATTGTCTGAAAATGTTT+TGG + chr1_4:5233638-5233657 None:intergenic 20.0%
!!! TTTGAAGTTTTAATCTTTCA+TGG - chr1_4:5242987-5243006 Msa0145560:three_prime_UTR 20.0%
!! TCAATTATTTACAACATGAA+AGG + chr1_4:5243289-5243308 None:intergenic 20.0%
!!! AACCTTTCTAAATTGTTATT+TGG - chr1_4:5243323-5243342 Msa0145560:intron 20.0%
!!! ACCTTTCTAAATTGTTATTT+GGG - chr1_4:5243324-5243343 Msa0145560:intron 20.0%
!!! TTTTACAATTCCTTTAACTA+AGG - chr1_4:5243430-5243449 Msa0145560:CDS 20.0%
!! TTTACAATTCCTTTAACTAA+GGG - chr1_4:5243431-5243450 Msa0145560:CDS 20.0%
!! AGTTAAAGGAATTGTAAAAA+GGG + chr1_4:5243429-5243448 None:intergenic 20.0%
!!! AGTAATTATGTTTAGCTTTT+AGG - chr1_4:5244028-5244047 Msa0145560:CDS 20.0%
!!! GAAATTTATACTTTTATTGC+AGG - chr1_4:5236176-5236195 Msa0145560:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_4:5233637-5233656 None:intergenic 20.0%
!!! TTGTTTTCCTGTTTTTATAT+TGG - chr1_4:5245137-5245156 Msa0145560:CDS 20.0%
!!! TTGAATCATGAATTATTTTG+AGG - chr1_4:5245413-5245432 Msa0145560:intron 20.0%
!!! AATCATGAGTTTTAAACAAA+AGG + chr1_4:5246554-5246573 None:intergenic 20.0%
!! TTTAACAAAATATGGAAAAG+AGG + chr1_4:5246712-5246731 None:intergenic 20.0%
!! GAGATAAAACAACATTATTT+GGG + chr1_4:5246809-5246828 None:intergenic 20.0%
!! AGAGATAAAACAACATTATT+TGG + chr1_4:5246810-5246829 None:intergenic 20.0%
!! ATTGTGATAACAATAACAAT+TGG + chr1_4:5247258-5247277 None:intergenic 20.0%
!! CGTTGAATAAAAACATTTAA+GGG + chr1_4:5247287-5247306 None:intergenic 20.0%
!!! CCTTAAATGTTTTTATTCAA+CGG - chr1_4:5247285-5247304 Msa0145560:intron 20.0%
!! GATTATTCTTCATAATTTGA+AGG - chr1_4:5247509-5247528 Msa0145560:CDS 20.0%
!! AATAAAAATTACCATCTACT+GGG + chr1_4:5248000-5248019 None:intergenic 20.0%
!!! TCTTTGTTTACAGTTAAAAT+GGG + chr1_4:5248221-5248240 None:intergenic 20.0%
!!! TTTTCACAAAATATGGAAAT+GGG + chr1_4:5248356-5248375 None:intergenic 20.0%
!!! ATTTTCACAAAATATGGAAA+TGG + chr1_4:5248357-5248376 None:intergenic 20.0%
!!! TTCATGATTTTCACAAAATA+TGG + chr1_4:5248363-5248382 None:intergenic 20.0%
!! AGGTTTCTACAAAAATATTA+CGG - chr1_4:5249331-5249350 Msa0145560:intron 20.0%
!! ACAAAAATATTACGGAAAAA+AGG - chr1_4:5249339-5249358 Msa0145560:intron 20.0%
!! CAAAAATATTACGGAAAAAA+GGG - chr1_4:5249340-5249359 Msa0145560:intron 20.0%
!! CAATCCTATTTATTAATAGA+TGG - chr1_4:5249428-5249447 Msa0145560:intron 20.0%
!! ACAACCATCTATTAATAAAT+AGG + chr1_4:5249435-5249454 None:intergenic 20.0%
!! TTTCAATCAGATAAACTATA+TGG + chr1_4:5249852-5249871 None:intergenic 20.0%
!! TTTATCAATTTCAACTGAAA+AGG + chr1_4:5249969-5249988 None:intergenic 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + chr1_4:5250030-5250049 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr1_4:5250067-5250086 None:intergenic 20.0%
!! AATTAGAGTTATATTGGATT+GGG + chr1_4:5250099-5250118 None:intergenic 20.0%
!! TAATTAGAGTTATATTGGAT+TGG + chr1_4:5250100-5250119 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr1_4:5250140-5250159 None:intergenic 20.0%
!!! GCGTTTTTTTTTTTTTTTTG+AGG - chr1_4:5250496-5250515 Msa0145560:intron 20.0%
!!! TTTTTTTGAGGAAAACAATT+TGG - chr1_4:5250508-5250527 Msa0145560:intron 20.0%
!!! TTTTTTGAGGAAAACAATTT+GGG - chr1_4:5250509-5250528 Msa0145560:intron 20.0%
!!! TGATTTTCTTAATTTTCAGT+GGG + chr1_4:5250575-5250594 None:intergenic 20.0%
!!! ATGATTTTCTTAATTTTCAG+TGG + chr1_4:5250576-5250595 None:intergenic 20.0%
!! AAAAAAAAACATTGTGTTTG+AGG + chr1_4:5250625-5250644 None:intergenic 20.0%
!! TAAAAACTCATGAATAAATG+AGG - chr1_4:5250665-5250684 Msa0145560:intron 20.0%
!! AAAAACTCATGAATAAATGA+GGG - chr1_4:5250666-5250685 Msa0145560:intron 20.0%
!!! GACAAAATCAATTTTATTCT+CGG + chr1_4:5250929-5250948 None:intergenic 20.0%
!!! ATTGAAAAAGGTTGAATTTT+TGG + chr1_4:5251227-5251246 None:intergenic 20.0%
!! AAAAGGATAGAGAATTTAAA+AGG + chr1_4:5251274-5251293 None:intergenic 20.0%
!!! GATTATTGGTTATATAGTTT+AGG - chr1_4:5251334-5251353 Msa0145560:intron 20.0%
!! GATAAAAAAATTCAAAAAGG+TGG + chr1_4:5251568-5251587 None:intergenic 20.0%
!! AAAATTAGAAACTTCAACAT+GGG + chr1_4:5251663-5251682 None:intergenic 20.0%
!!! GTTTCTAATTTTGATTTTTG+TGG - chr1_4:5251671-5251690 Msa0145560:intron 20.0%
!! GAAAGTTATAAATTTATTGC+AGG - chr1_4:5251906-5251925 Msa0145560:intron 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_4:5233835-5233854 Msa0145560:intron 20.0%
!! TTCATATGGTAAAAGTTAAT+GGG + chr1_4:5252507-5252526 None:intergenic 20.0%
!! ATTCATATGGTAAAAGTTAA+TGG + chr1_4:5252508-5252527 None:intergenic 20.0%
!!! GATTTTTGTTTTTACTGATA+GGG - chr1_4:5252857-5252876 Msa0145560:intron 20.0%
!!! AATCATGAGTTTTAAGAAAA+AGG + chr1_4:5253306-5253325 None:intergenic 20.0%
!! GAGATATAACAACATTATTT+GGG + chr1_4:5253508-5253527 None:intergenic 20.0%
!! AGAGATATAACAACATTATT+TGG + chr1_4:5253509-5253528 None:intergenic 20.0%
!! AAATGAAACAAAACACAAAA+GGG + chr1_4:5253535-5253554 None:intergenic 20.0%
!! ATTAAATTACCAGTAAAAGA+TGG - chr1_4:5253665-5253684 Msa0145560:intron 20.0%
!! ACTATGATAACAAAAACAAT+TGG + chr1_4:5253903-5253922 None:intergenic 20.0%
!! ATATGACAAAAACTTCAAAT+GGG + chr1_4:5253992-5254011 None:intergenic 20.0%
!! AATATGACAAAAACTTCAAA+TGG + chr1_4:5253993-5254012 None:intergenic 20.0%
!! GATTATTCTTCATAATATGA+AGG - chr1_4:5254150-5254169 Msa0145560:intron 20.0%
!! TAATTAATACATTCTGTGTA+TGG + chr1_4:5254526-5254545 None:intergenic 20.0%
!! TTGCTTAATTGTTTATTTGA+AGG - chr1_4:5254944-5254963 Msa0145560:intron 20.0%
!! TTTGAGGAAAAATGAAAAAT+TGG + chr1_4:5255549-5255568 None:intergenic 20.0%
!!! AAATTGGTTTACTTTTTTAG+GGG - chr1_4:5255693-5255712 Msa0145560:intron 20.0%
!! GTTTGACAAAAAAAAGAAAA+TGG - chr1_4:5255965-5255984 Msa0145560:intron 20.0%
!!! TTTTTGTTTCATTTAGAAGA+TGG + chr1_4:5256328-5256347 None:intergenic 20.0%
!!! GAAATTTATATTTTAACTGC+AGG - chr1_4:5256581-5256600 Msa0145560:intron 20.0%
!!! AAATTGTCTGAAAATGTTTT+AGG + chr1_4:5233637-5233656 None:intergenic 20.0%
!!! TTTGAGGTTTTAATCTTTAA+TGG - chr1_4:5233835-5233854 Msa0145560:intron 20.0%
!! AATAATCAAAACTGATCATA+GGG + chr1_4:5257580-5257599 None:intergenic 20.0%
!! AAATAATCAAAACTGATCAT+AGG + chr1_4:5257581-5257600 None:intergenic 20.0%
!! CCAATTTGACAAAAAAAAAA+TGG + chr1_4:5257638-5257657 None:intergenic 20.0%
!!! CCATTTTTTTTTTGTCAAAT+TGG - chr1_4:5257635-5257654 Msa0145560:intron 20.0%
!! AATGATAAAACAAAAGTGAT+TGG + chr1_4:5257666-5257685 None:intergenic 20.0%
!! ATTAACAAAATATGGAAAAG+AGG + chr1_4:5257804-5257823 None:intergenic 20.0%
!! ATAATAAAAAAGTTCAGTGT+CGG - chr1_4:5257824-5257843 Msa0145560:CDS 20.0%
!! GTAAATTAAGAATCACAAAA+GGG + chr1_4:5257876-5257895 None:intergenic 20.0%
!! GAGATAAAACAACATTATTT+GGG + chr1_4:5246809-5246828 None:intergenic 20.0%
!! AGAGATAAAACAACATTATT+TGG + chr1_4:5246810-5246829 None:intergenic 20.0%
!! TATAAATTACCAGTAAAAGA+TGG - chr1_4:5258062-5258081 Msa0145560:CDS 20.0%
!! AAGAAAACTTTACATAACAA+TGG + chr1_4:5258327-5258346 None:intergenic 20.0%
! ATTTGTTCAAGAGAATTAAG+TGG + chr1_4:5232951-5232970 None:intergenic 25.0%
!! TCTCTCATTCAATACAATTT+TGG - chr1_4:5233299-5233318 Msa0145560:intron 25.0%
!! CAAGTACATGATTTAAAACA+AGG + chr1_4:5233440-5233459 None:intergenic 25.0%
!!! CTTGTTTTAAATCATGTACT+TGG - chr1_4:5233438-5233457 Msa0145560:intron 25.0%
!! CAATGTTTATTAGTCTCAAA+TGG - chr1_4:5233584-5233603 Msa0145560:intron 25.0%
! TTCCTTGTATTTAAGTACAA+TGG - chr1_4:5233802-5233821 Msa0145560:intron 25.0%
!! CAAATATGAACACTTTAGAA+AGG + chr1_4:5234127-5234146 None:intergenic 25.0%
!!! CTTTCTAAAGTGTTCATATT+TGG - chr1_4:5234125-5234144 Msa0145560:intron 25.0%
! GAAACGCAAAAATAAGTTAA+GGG + chr1_4:5235590-5235609 None:intergenic 25.0%
! TGAAACGCAAAAATAAGTTA+AGG + chr1_4:5235589-5235608 None:intergenic 25.0%
!!! CTTATTTTTGCGTTTCATTT+TGG - chr1_4:5234222-5234241 Msa0145560:intron 25.0%
!! TTGAGACAGTTTAAAGTTAA+AGG + chr1_4:5235559-5235578 None:intergenic 25.0%
! AACTTTAAACTGTCTCAATT+TGG - chr1_4:5234251-5234270 Msa0145560:intron 25.0%
!!! GATTTTTTTTTCTGGGTTAT+AGG + chr1_4:5234456-5234475 None:intergenic 25.0%
!!! TTGTTGTTGTTTGATTTTCT+GGG + chr1_4:5234563-5234582 None:intergenic 25.0%
! GTTAAATTTATGGGTTTGAA+GGG + chr1_4:5234586-5234605 None:intergenic 25.0%
!!! GATTTTTCATGACTTTGAAA+AGG + chr1_4:5234608-5234627 None:intergenic 25.0%
! AAAAATAGGCAATTGTTTAC+TGG - chr1_4:5234730-5234749 Msa0145560:intron 25.0%
!!! TGTTTTTTCTTTGTTGTTCT+CGG + chr1_4:5234926-5234945 None:intergenic 25.0%
! TGAAATTGAAAACTGAAACA+AGG - chr1_4:5234981-5235000 Msa0145560:intron 25.0%
!!! TGTTCTAGTTTGTTGTTATT+GGG + chr1_4:5235025-5235044 None:intergenic 25.0%
! AGCAGATGTATTAATTCAAT+CGG + chr1_4:5235123-5235142 None:intergenic 25.0%
!!! AATATGACAATTGATTTGGA+TGG - chr1_4:5235319-5235338 Msa0145560:intron 25.0%
! AACTTTAAACTGTCTCAATT+TGG + chr1_4:5234251-5234270 None:intergenic 25.0%
!! ATTGAGACAGTTTAAAGTTA+AGG - chr1_4:5235558-5235577 Msa0145560:intron 25.0%
!! TTGAGACAGTTTAAAGTTAA+GGG - chr1_4:5235559-5235578 Msa0145560:intron 25.0%
!!! CTTATTTTTGCGTTTCATTT+TGG + chr1_4:5234222-5234241 None:intergenic 25.0%
! TGAAACGCAAAAATAAGTTA+AGG - chr1_4:5235589-5235608 Msa0145560:intron 25.0%
! GAAACGCAAAAATAAGTTAA+GGG - chr1_4:5235590-5235609 Msa0145560:intron 25.0%
!!! TTTTTAAATAATGGGAACTG+TGG - chr1_4:5235825-5235844 Msa0145560:intron 25.0%
! AAAAGAAAAGGAAATGGATA+AGG - chr1_4:5235960-5235979 Msa0145560:intron 25.0%
! AAAGATTAAAACCTCAAAGT+GGG + chr1_4:5233833-5233852 None:intergenic 25.0%
!!! TTTGAGGTTTTAATCTTTGA+TGG - chr1_4:5236408-5236427 Msa0145560:intron 25.0%
!!! TCTTATTTTGTCGAAAAATG+CGG - chr1_4:5236456-5236475 Msa0145560:intron 25.0%
!!! AGTAGCTAACCATTTTTTTT+TGG - chr1_4:5236867-5236886 Msa0145560:intron 25.0%
! AATGAAAAAAGAAAAGTGGT+TGG + chr1_4:5236907-5236926 None:intergenic 25.0%
!! AATACTACTTCTCTTCATTT+TGG - chr1_4:5237304-5237323 Msa0145560:intron 25.0%
! CTTTAAATAGGAAACATTTG+AGG + chr1_4:5237997-5238016 None:intergenic 25.0%
! ACGACCAATAAACTTTAAAT+AGG + chr1_4:5238009-5238028 None:intergenic 25.0%
! ATACGATTCTCACATAATAA+AGG - chr1_4:5238488-5238507 Msa0145560:intron 25.0%
! AATCTGATATATATCACCAT+GGG + chr1_4:5238535-5238554 None:intergenic 25.0%
! TGAGCAAGAAAATAAAAACT+TGG + chr1_4:5238774-5238793 None:intergenic 25.0%
! TACGATATTAATGACTGTTA+TGG - chr1_4:5239104-5239123 Msa0145560:intron 25.0%
! TCAAGAAAGATTTCATAACA+AGG + chr1_4:5239472-5239491 None:intergenic 25.0%
!!! CAAAAATATCACTTTTTGCA+AGG + chr1_4:5239807-5239826 None:intergenic 25.0%
!! CTTGCAAAAAGTGATATTTT+TGG - chr1_4:5239805-5239824 Msa0145560:intron 25.0%
!! TAACTCAGAATTTTCAATGA+CGG - chr1_4:5240003-5240022 Msa0145560:intron 25.0%
! TCAAAATTGGATTACTAGAT+TGG + chr1_4:5240390-5240409 None:intergenic 25.0%
! CCTTTCAAAAAAAATTATGG+CGG + chr1_4:5240616-5240635 None:intergenic 25.0%
! GAAAGGACAACATAAATAAT+TGG - chr1_4:5240630-5240649 Msa0145560:intron 25.0%
! GACAACATAAATAATTGGAA+GGG - chr1_4:5240635-5240654 Msa0145560:intron 25.0%
!! TTCAAAAGTTCTTGTTTAGA+CGG - chr1_4:5240728-5240747 Msa0145560:intron 25.0%
!!! ATATGCAACTCATTTTTGAA+AGG + chr1_4:5240803-5240822 None:intergenic 25.0%
! CTAAAATTAAAACAGTGTCT+TGG - chr1_4:5240839-5240858 Msa0145560:intron 25.0%
! AAAATTAAAACAGTGTCTTG+GGG - chr1_4:5240841-5240860 Msa0145560:intron 25.0%
! AAAACAGGTACTAAATCAAT+TGG + chr1_4:5240875-5240894 None:intergenic 25.0%
! ATAACTCTGATAAGTTCTTT+CGG - chr1_4:5241130-5241149 Msa0145560:intron 25.0%
! GAAATGAATGAACTGAAAAT+GGG + chr1_4:5241377-5241396 None:intergenic 25.0%
! TGAAATGAATGAACTGAAAA+TGG + chr1_4:5241378-5241397 None:intergenic 25.0%
!!! AGTTTTGAGCTTTTGATTTT+TGG - chr1_4:5241548-5241567 Msa0145560:intron 25.0%
!!! GTTTTGAGCTTTTGATTTTT+GGG - chr1_4:5241549-5241568 Msa0145560:intron 25.0%
! TGTGAGAATTTATATAGGAT+TGG - chr1_4:5241700-5241719 Msa0145560:intron 25.0%
!!! ATCGTCACATATTGATTTTA+AGG + chr1_4:5241999-5242018 None:intergenic 25.0%
!!! ACGATTTTGTCTAAAACAAA+AGG - chr1_4:5242014-5242033 Msa0145560:intron 25.0%
! AAAAGAAAAGGAAGTGAAAA+AGG - chr1_4:5242551-5242570 Msa0145560:intron 25.0%
!!! ATTGAGTTGAAGAATAATGT+TGG + chr1_4:5242720-5242739 None:intergenic 25.0%
!!! TCTTATTTTGTTGGAAAATG+TGG - chr1_4:5243035-5243054 Msa0145560:CDS 25.0%
!! AGTTGTTGCTTAAAATCTTT+GGG + chr1_4:5243230-5243249 None:intergenic 25.0%
!! AAGTTGTTGCTTAAAATCTT+TGG + chr1_4:5243231-5243250 None:intergenic 25.0%
! ACCCAAATAACAATTTAGAA+AGG + chr1_4:5243328-5243347 None:intergenic 25.0%
! TTACAATTCCTTTAACTAAG+GGG - chr1_4:5243432-5243451 Msa0145560:CDS 25.0%
! CAGTTAAAGGAATTGTAAAA+AGG + chr1_4:5243629-5243648 None:intergenic 25.0%
!! TTTTTATCCTTTCCGAATAA+TGG - chr1_4:5243786-5243805 Msa0145560:intron 25.0%
!!! GATTTTAGTGTAGTTTTTCT+TGG - chr1_4:5243925-5243944 Msa0145560:CDS 25.0%
! CATGTTATCAAGATGATTAA+TGG - chr1_4:5243991-5244010 Msa0145560:CDS 25.0%
! TTCCTTGTCTTTAATTACAA+TGG - chr1_4:5244312-5244331 Msa0145560:CDS 25.0%
!!! TTTGATGTTTTGATCTTTGA+TGG - chr1_4:5244345-5244364 Msa0145560:intron 25.0%
!!! AAAGAAGCTTCTTATTTTGT+CGG - chr1_4:5236447-5236466 Msa0145560:intron 25.0%
! TGGTTTATATGAGAAATTTC+AGG - chr1_4:5244509-5244528 Msa0145560:intron 25.0%
! TTTCAGGATCTTAACAATAT+AGG - chr1_4:5244525-5244544 Msa0145560:intron 25.0%
!! AGCATTAAAAGTCTTTTCAT+TGG + chr1_4:5244580-5244599 None:intergenic 25.0%
!! AATGAAAAGACTTTTAATGC+TGG - chr1_4:5244579-5244598 Msa0145560:intron 25.0%
! CTTATGACCAATATAAAAAC+AGG + chr1_4:5245147-5245166 None:intergenic 25.0%
!! TTTTATATTGGTCATAAGCA+TGG - chr1_4:5245149-5245168 Msa0145560:CDS 25.0%
! TGTGATTCATTAGAATGAAT+CGG + chr1_4:5245308-5245327 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+TGG + chr1_4:5245386-5245405 None:intergenic 25.0%
! ATTATAAAAGAGAGAATGAG+AGG - chr1_4:5245593-5245612 Msa0145560:intron 25.0%
! TATATTTCATCGTTGTGAAT+AGG - chr1_4:5246295-5246314 Msa0145560:intron 25.0%
! ATATTTCATCGTTGTGAATA+GGG - chr1_4:5246296-5246315 Msa0145560:intron 25.0%
!!! TAATGGGCTTGATTAATTAA+AGG - chr1_4:5246357-5246376 Msa0145560:intron 25.0%
! GTAAATTGAGAATCACAAAA+GGG + chr1_4:5246784-5246803 None:intergenic 25.0%
! ATAAAACAACATTATTTGGG+AGG + chr1_4:5246806-5246825 None:intergenic 25.0%
!!! ATTTCTACTTTTATGTATGG+AGG - chr1_4:5246918-5246937 Msa0145560:CDS 25.0%
! CATTAATTAGGATGGAATTA+TGG + chr1_4:5247016-5247035 None:intergenic 25.0%
! GAATAAAAACATTTAAGGGA+AGG + chr1_4:5247283-5247302 None:intergenic 25.0%
! CCGTTGAATAAAAACATTTA+AGG + chr1_4:5247288-5247307 None:intergenic 25.0%
!!! TTCCTAATACCGATTTATAA+TGG - chr1_4:5247425-5247444 Msa0145560:CDS 25.0%
!! TATTCCATATGAATTTTCGA+AGG - chr1_4:5247461-5247480 Msa0145560:intron 25.0%
! ATAATCTTTATCTTGCAGTT+TGG + chr1_4:5247495-5247514 None:intergenic 25.0%
! CAATAAAAATTACCATCTAC+TGG + chr1_4:5248001-5248020 None:intergenic 25.0%
! GTATTCAACATTTATCCTTT+GGG + chr1_4:5248157-5248176 None:intergenic 25.0%
! AGTATTCAACATTTATCCTT+TGG + chr1_4:5248158-5248177 None:intergenic 25.0%
!!! TGGAAGGTAGAAATTTTTTA+AGG + chr1_4:5248183-5248202 None:intergenic 25.0%
!! GTCTTTGTTTACAGTTAAAA+TGG + chr1_4:5248222-5248241 None:intergenic 25.0%
! TTTCACAAAATATGGAAATG+GGG + chr1_4:5248355-5248374 None:intergenic 25.0%
! GATAGAATATTTGTTTGTCT+TGG + chr1_4:5249288-5249307 None:intergenic 25.0%
! TCCAAATTAACAATCGTTTA+AGG - chr1_4:5249311-5249330 Msa0145560:intron 25.0%
! ACCTTAAACGATTGTTAATT+TGG + chr1_4:5249315-5249334 None:intergenic 25.0%
! AATAGATGGTTGTTTGATAA+TGG - chr1_4:5249442-5249461 Msa0145560:intron 25.0%
! ACAAACAGATGTTACAAATT+TGG + chr1_4:5249673-5249692 None:intergenic 25.0%
! TGTTAAAGAATGATGCTATA+AGG - chr1_4:5249690-5249709 Msa0145560:intron 25.0%
! AGTTTATCTGATTGAAACAT+CGG - chr1_4:5249855-5249874 Msa0145560:intron 25.0%
!! GTATTTTCGTCTAAAGAAAT+AGG + chr1_4:5249936-5249955 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + chr1_4:5250031-5250050 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG + chr1_4:5250141-5250160 None:intergenic 25.0%
! GTCATTACCTACTAAATATT+AGG - chr1_4:5250266-5250285 Msa0145560:intron 25.0%
! AAAACTCATGAATAAATGAG+GGG - chr1_4:5250667-5250686 Msa0145560:intron 25.0%
!! AGTCGTTTAAAGTTTATGTA+CGG + chr1_4:5250758-5250777 None:intergenic 25.0%
! AAAAAGACATCTAATTTGAG+AGG + chr1_4:5250809-5250828 None:intergenic 25.0%
! CAAATAAAATGCAGTTACAA+AGG - chr1_4:5250948-5250967 Msa0145560:intron 25.0%
! TTGTCAAAACAAAAAGTGAT+GGG - chr1_4:5251057-5251076 Msa0145560:intron 25.0%
! AACACAAAATAGCAAATCAT+GGG - chr1_4:5251089-5251108 Msa0145560:intron 25.0%
!! TACAAGTTGTTGTTGAAAAT+CGG + chr1_4:5251175-5251194 None:intergenic 25.0%
!!! AATGTTGAGCTTTTGATTAT+TGG - chr1_4:5251320-5251339 Msa0145560:intron 25.0%
!!! CTATCACTTTTTCATCAATT+TGG + chr1_4:5251521-5251540 None:intergenic 25.0%
! TGATGAAAAAGTGATAGTAT+AGG - chr1_4:5251524-5251543 Msa0145560:intron 25.0%
! CAAAATTAGAAACTTCAACA+TGG + chr1_4:5251664-5251683 None:intergenic 25.0%
!!! TCTTATTTTGTTCTAGAATG+TGG - chr1_4:5252183-5252202 Msa0145560:intron 25.0%
!!! CTAACTTTTGAAACTACTAA+TGG - chr1_4:5252351-5252370 Msa0145560:intron 25.0%
!! AATGGAAATACTTTTAATGC+TGG - chr1_4:5252369-5252388 Msa0145560:intron 25.0%
! TAGATGAGTTAGAATTCATA+TGG + chr1_4:5252521-5252540 None:intergenic 25.0%
!! CATCTAGTAACTATAACTTT+TGG - chr1_4:5252535-5252554 Msa0145560:intron 25.0%
!! ATCTTGATTTTGTACTAAAC+TGG - chr1_4:5252706-5252725 Msa0145560:intron 25.0%
! AAATCTAGTGTGTATCTATA+TGG - chr1_4:5252744-5252763 Msa0145560:intron 25.0%
!! AAAATTCATGATAGTGAATC+AGG + chr1_4:5252790-5252809 None:intergenic 25.0%
!!! CGATTTTTGTTTTTACTGAT+AGG - chr1_4:5252856-5252875 Msa0145560:intron 25.0%
!!! TGAGTTTTAAGAAAAAGGAT+AGG + chr1_4:5253301-5253320 None:intergenic 25.0%
! TTTAACAAAATATGGAACAG+AGG + chr1_4:5253410-5253429 None:intergenic 25.0%
! ATAATCAAAACGTTTCATGT+CGG - chr1_4:5253430-5253449 Msa0145560:intron 25.0%
! CAAATGAAACAAAACACAAA+AGG + chr1_4:5253536-5253555 None:intergenic 25.0%
!! TGCATTCATCTTTTTATGTA+TGG - chr1_4:5253601-5253620 Msa0145560:intron 25.0%
!! ATTCATCTTTTTATGTATGG+AGG - chr1_4:5253604-5253623 Msa0145560:intron 25.0%
!! TCGTTCAATACAAACTTTTA+AGG + chr1_4:5253933-5253952 None:intergenic 25.0%
! ATCTCCAATCTTAATGTTAT+TGG + chr1_4:5254263-5254282 None:intergenic 25.0%
! CTTATTTCATGTACATTTAG+TGG - chr1_4:5254732-5254751 Msa0145560:intron 25.0%
! TATTATTAATATACTCCCTC+CGG - chr1_4:5254784-5254803 Msa0145560:intron 25.0%
! CATTCTCATATAACTAATGA+AGG - chr1_4:5254861-5254880 Msa0145560:intron 25.0%
! ATAACTAATGAAGGAACAAA+TGG - chr1_4:5254870-5254889 Msa0145560:intron 25.0%
!!! TTGAGACTTTTTTGTGAAAA+AGG + chr1_4:5255218-5255237 None:intergenic 25.0%
! AAACGGCCATTTAAAAAAAT+TGG - chr1_4:5255677-5255696 Msa0145560:intron 25.0%
! TTACCATATCAAATTTACGT+GGG - chr1_4:5255901-5255920 Msa0145560:intron 25.0%
!!! TCAAGCTTTTTTGTTTTAGT+AGG + chr1_4:5256143-5256162 None:intergenic 25.0%
! TGAACTATTTCATTCTCAAA+TGG - chr1_4:5256168-5256187 Msa0145560:intron 25.0%
! GAACTATTTCATTCTCAAAT+GGG - chr1_4:5256169-5256188 Msa0145560:intron 25.0%
!! AACAAGTTGTTGTTGAAAAT+GGG + chr1_4:5256275-5256294 None:intergenic 25.0%
!! TAACAAGTTGTTGTTGAAAA+TGG + chr1_4:5256276-5256295 None:intergenic 25.0%
! TCAATACTATAGTCAAAGAA+AGG + chr1_4:5256356-5256375 None:intergenic 25.0%
!! ATGTATCTTTTAATCTCAGA+TGG - chr1_4:5256559-5256578 Msa0145560:intron 25.0%
!!! TCTTATTTTGTTCTAGAATG+TGG - chr1_4:5252183-5252202 Msa0145560:intron 25.0%
! TTTCTGTTTGTAGTTTCAAA+AGG + chr1_4:5257032-5257051 None:intergenic 25.0%
! GGTAAATTAAGAATCACAAA+AGG + chr1_4:5257877-5257896 None:intergenic 25.0%
! ATAAAACAACATTATTTGGG+AGG + chr1_4:5246806-5246825 None:intergenic 25.0%
!!! CAATTACTTTAAAATAAGGG+CGG + chr1_4:5257925-5257944 None:intergenic 25.0%
!! ATAAAAGATGAATGCTGTTT+CGG + chr1_4:5258002-5258021 None:intergenic 25.0%
!! CAGCATTCATCTTTTATATA+TGG - chr1_4:5258005-5258024 Msa0145560:intron 25.0%
!! CATTCATCTTTTATATATGG+AGG - chr1_4:5258008-5258027 Msa0145560:intron 25.0%
AATGATTTCCTCCAATGATT+TGG + chr1_4:5232787-5232806 None:intergenic 30.0%
CATTGGAGGAAATCATTTAT+TGG - chr1_4:5232790-5232809 Msa0145560:three_prime_UTR 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_4:5232817-5232836 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_4:5232818-5232837 None:intergenic 30.0%
!! TACAAGTTGATGGTGAAAAT+GGG + chr1_4:5232859-5232878 None:intergenic 30.0%
!! TTACAAGTTGATGGTGAAAA+TGG + chr1_4:5232860-5232879 None:intergenic 30.0%
TACACAAAATTCCCTCAAAT+TGG + chr1_4:5233332-5233351 None:intergenic 30.0%
! GACATTTATACTTTTGTTGC+AGG - chr1_4:5233606-5233625 Msa0145560:intron 30.0%
GATACTATTTACTTCACGAA+CGG - chr1_4:5233736-5233755 Msa0145560:intron 30.0%
CACCATTGTACTTAAATACA+AGG + chr1_4:5233807-5233826 None:intergenic 30.0%
ACAGTTCACCTGAAAAATTA+TGG - chr1_4:5233941-5233960 Msa0145560:intron 30.0%
CAGTTCACCTGAAAAATTAT+GGG - chr1_4:5233942-5233961 Msa0145560:intron 30.0%
AAAATTGGTGTGAAGCAATA+GGG + chr1_4:5234010-5234029 None:intergenic 30.0%
AACAAGTTGTCGTTCAAAAT+TGG + chr1_4:5234025-5234044 None:intergenic 30.0%
AAGGAAAGAAAAAGAGGTAA+AGG + chr1_4:5234070-5234089 None:intergenic 30.0%
! TTTTTCATTCATGTGGAACA+TGG + chr1_4:5234093-5234112 None:intergenic 30.0%
! TTTAGGGTAAATACAGACTT+TGG - chr1_4:5234191-5234210 Msa0145560:intron 30.0%
GTGTATGAATGTAATGATGA+AGG + chr1_4:5234420-5234439 None:intergenic 30.0%
!!! GTTGTTGTTGTTTGATTTTC+TGG + chr1_4:5234564-5234583 None:intergenic 30.0%
GGTTAAATTTATGGGTTTGA+AGG + chr1_4:5234587-5234606 None:intergenic 30.0%
TTAATTTCATCACACAGAGA+CGG + chr1_4:5234898-5234917 None:intergenic 30.0%
!! CTGTTCTAGTTTGTTGTTAT+TGG + chr1_4:5235026-5235045 None:intergenic 30.0%
ACAACAAACTAGAACAGAAA+AGG - chr1_4:5235029-5235048 Msa0145560:intron 30.0%
TGATAAATCCAATCATCACT+TGG + chr1_4:5235099-5235118 None:intergenic 30.0%
ACATCTGCTATAAGTATGAA+TGG - chr1_4:5235134-5235153 Msa0145560:intron 30.0%
AAAAGGGTAAATACAGACTT+TGG + chr1_4:5235617-5235636 None:intergenic 30.0%
TGTGGGCATAGTAAAAAAAA+GGG + chr1_4:5235633-5235652 None:intergenic 30.0%
ATGTGGGCATAGTAAAAAAA+AGG + chr1_4:5235634-5235653 None:intergenic 30.0%
GTAAGGAAAAGAAAAGGAAA+TGG - chr1_4:5235954-5235973 Msa0145560:intron 30.0%
!! GATTTTAGTGCAGTTTTTCT+TGG - chr1_4:5235984-5236003 Msa0145560:intron 30.0%
CATGTACTTGAGATGATTAA+TGG - chr1_4:5236051-5236070 Msa0145560:intron 30.0%
GAGTTACATGGAAGAATATA+AGG - chr1_4:5236271-5236290 Msa0145560:intron 30.0%
CAAAGATTAAAACCTCAAAG+TGG + chr1_4:5236407-5236426 None:intergenic 30.0%
!! ACTAGATATTCGTATTGACT+GGG + chr1_4:5236782-5236801 None:intergenic 30.0%
GATGTTCATACATGATGTAT+CGG - chr1_4:5236957-5236976 Msa0145560:intron 30.0%
TTATGTCATCCTTCACAAAT+AGG + chr1_4:5237205-5237224 None:intergenic 30.0%
AAGAGAAGTAGTATTATCGA+TGG + chr1_4:5237299-5237318 None:intergenic 30.0%
TTTAATAGCCATTAAGGGAA+AGG + chr1_4:5237330-5237349 None:intergenic 30.0%
GACAGTTTAATAGCCATTAA+GGG + chr1_4:5237335-5237354 None:intergenic 30.0%
AGACAGTTTAATAGCCATTA+AGG + chr1_4:5237336-5237355 None:intergenic 30.0%
! CTTTAGTTCAAACATTCACA+AGG + chr1_4:5237426-5237445 None:intergenic 30.0%
TAAGCTCTGTTATGAATATC+TGG + chr1_4:5237594-5237613 None:intergenic 30.0%
AAATGAGGAGGAAAATGATT+GGG + chr1_4:5237759-5237778 None:intergenic 30.0%
AACAAAATATGGAAATGAGG+AGG + chr1_4:5237771-5237790 None:intergenic 30.0%
CAATAACAATTGGTACTTCT+TGG + chr1_4:5237910-5237929 None:intergenic 30.0%
ATGTGAAAACTATCATGTGT+TGG + chr1_4:5238419-5238438 None:intergenic 30.0%
GAATCTGATATATATCACCA+TGG + chr1_4:5238536-5238555 None:intergenic 30.0%
!! TTAGTTATTTTCGTTCTCGA+TGG - chr1_4:5238623-5238642 Msa0145560:intron 30.0%
TTGTTTGTCATAAGAGACTA+GGG - chr1_4:5238689-5238708 Msa0145560:intron 30.0%
TTGGTTGAACTTAACTGATA+TGG + chr1_4:5238755-5238774 None:intergenic 30.0%
!! ACCAAATGCTTTAAGTTGAA+AGG - chr1_4:5238821-5238840 Msa0145560:intron 30.0%
GTTATTGAGCATGTTTGTTT+AGG - chr1_4:5238906-5238925 Msa0145560:intron 30.0%
TCGAATAAGACTATCATAGT+TGG + chr1_4:5239325-5239344 None:intergenic 30.0%
!! AACTATGATAGTCTTATTCG+AGG - chr1_4:5239324-5239343 Msa0145560:intron 30.0%
!!! ATTCACAAGGTTTTGAGATA+TGG - chr1_4:5239376-5239395 Msa0145560:intron 30.0%
TAATAAATCTGCACATGAGT+TGG + chr1_4:5239561-5239580 None:intergenic 30.0%
AACTCATGTGCAGATTTATT+AGG - chr1_4:5239560-5239579 Msa0145560:intron 30.0%
! TAATTTCCTTCATGCTCTTT+TGG - chr1_4:5239632-5239651 Msa0145560:intron 30.0%
!! GATGGATTAACAAACTAAAC+GGG + chr1_4:5239683-5239702 None:intergenic 30.0%
!! GGATGGATTAACAAACTAAA+CGG + chr1_4:5239684-5239703 None:intergenic 30.0%
TACGGAATTGAGAGAATTTA+TGG - chr1_4:5239729-5239748 Msa0145560:intron 30.0%
!! GAGAATCTTTGCATTGATTT+CGG - chr1_4:5239769-5239788 Msa0145560:intron 30.0%
!! AGAATCTTTGCATTGATTTC+GGG - chr1_4:5239770-5239789 Msa0145560:intron 30.0%
!!! TTGACGATGATTTTTTATGG+TGG - chr1_4:5239836-5239855 Msa0145560:intron 30.0%
! CAATTTCCTATTAGGTTGTT+CGG - chr1_4:5239894-5239913 Msa0145560:intron 30.0%
AAAATACCGAACAACCTAAT+AGG + chr1_4:5239903-5239922 None:intergenic 30.0%
!! TAGGTTGTTCGGTATTTTAA+TGG - chr1_4:5239905-5239924 Msa0145560:intron 30.0%
!!! AGGTTGTTCGGTATTTTAAT+GGG - chr1_4:5239906-5239925 Msa0145560:intron 30.0%
!! ATAAGAAGTGTTCTCCATAT+TGG - chr1_4:5240348-5240367 Msa0145560:intron 30.0%
TTACTAGATTGGACATTTAC+AGG + chr1_4:5240379-5240398 None:intergenic 30.0%
CTTAGACTGAACATCAAAAT+TGG + chr1_4:5240403-5240422 None:intergenic 30.0%
!! CAATTTTGATGTTCAGTCTA+AGG - chr1_4:5240401-5240420 Msa0145560:intron 30.0%
TAATCTCCAAACCATAATGT+TGG + chr1_4:5240427-5240446 None:intergenic 30.0%
! ACTAGCAACAAAAGATGTTT+TGG - chr1_4:5240476-5240495 Msa0145560:intron 30.0%
!!! AAAGATGTTTTGGCTAGAAA+AGG - chr1_4:5240486-5240505 Msa0145560:intron 30.0%
!! TGTTTTTAACTCAACCGATT+TGG - chr1_4:5240539-5240558 Msa0145560:intron 30.0%
ATTGTTACTAGACTCCAAAT+CGG + chr1_4:5240556-5240575 None:intergenic 30.0%
!!! CCGCCATAATTTTTTTTGAA+AGG - chr1_4:5240613-5240632 Msa0145560:intron 30.0%
GGACAACATAAATAATTGGA+AGG - chr1_4:5240634-5240653 Msa0145560:intron 30.0%
!! AATAATTGGAAGGGTATTCA+AGG - chr1_4:5240644-5240663 Msa0145560:intron 30.0%
CAACCAAAGACTTCAAATTA+CGG + chr1_4:5240754-5240773 None:intergenic 30.0%
!!! TTAGTACCTGTTTTGTTTAG+CGG - chr1_4:5240881-5240900 Msa0145560:intron 30.0%
! CACAAGTTGTTGTTGAAAAT+CGG + chr1_4:5241422-5241441 None:intergenic 30.0%
ATGTTATTCAATAATGGCTC+AGG - chr1_4:5241582-5241601 Msa0145560:intron 30.0%
TCCTATATAAATTCTCACAC+CGG + chr1_4:5241699-5241718 None:intergenic 30.0%
GATTCTATTGCAATGTGATA+CGG + chr1_4:5241774-5241793 None:intergenic 30.0%
ACATTGCAATAGAATCTGTT+GGG - chr1_4:5241778-5241797 Msa0145560:intron 30.0%
CACAAAAGTTTGATTCTGTT+GGG + chr1_4:5241962-5241981 None:intergenic 30.0%
AGAGGAAATGAGAGAAATTA+GGG - chr1_4:5242147-5242166 Msa0145560:intron 30.0%
! ATTTCTCTTGGTGATCAATT+GGG - chr1_4:5242170-5242189 Msa0145560:intron 30.0%
AAAGAGAAAAGGTAGGAATT+AGG - chr1_4:5242229-5242248 Msa0145560:intron 30.0%
AAGAGAAAAGGTAGGAATTA+GGG - chr1_4:5242230-5242249 Msa0145560:intron 30.0%
!!! CCAAGATTTTTTACACAGTT+AGG + chr1_4:5242372-5242391 None:intergenic 30.0%
CCTAACTGTGTAAAAAATCT+TGG - chr1_4:5242369-5242388 Msa0145560:intron 30.0%
GCTCTTTATATTGTTGTCTT+TGG - chr1_4:5242407-5242426 Msa0145560:intron 30.0%
TTTGCTTGGACTATTTAGTT+TGG - chr1_4:5242451-5242470 Msa0145560:intron 30.0%
AACAGTGGAACAAATATCAA+TGG + chr1_4:5242480-5242499 None:intergenic 30.0%
!!! ATTTGTTCCACTGTTTTTGT+TGG - chr1_4:5242485-5242504 Msa0145560:intron 30.0%
GTTAAAACCAACAAAAACAG+TGG + chr1_4:5242495-5242514 None:intergenic 30.0%
GGGCAAAAAATGAAAAGAAA+AGG - chr1_4:5242539-5242558 Msa0145560:intron 30.0%
TAGATAATGTTTGCAGAACA+AGG + chr1_4:5242615-5242634 None:intergenic 30.0%
CATATACTTGAGATGATTAC+TGG - chr1_4:5242641-5242660 Msa0145560:intron 30.0%
GATACCATTTACTTCACAAA+TGG - chr1_4:5242888-5242907 Msa0145560:three_prime_UTR 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_4:5242954-5242973 Msa0145560:three_prime_UTR 30.0%
TCCTTGTCTTTAAGTACAAT+GGG - chr1_4:5242955-5242974 Msa0145560:three_prime_UTR 30.0%
GACTTCTTCAACAGAATTAT+TGG + chr1_4:5243102-5243121 None:intergenic 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_4:5232817-5232836 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_4:5232818-5232837 None:intergenic 30.0%
! AAAATCTTTGGGAAGAAGTT+GGG + chr1_4:5243219-5243238 None:intergenic 30.0%
! TAAAATCTTTGGGAAGAAGT+TGG + chr1_4:5243220-5243239 None:intergenic 30.0%
TACAATTCCTTTAACTAAGG+GGG - chr1_4:5243433-5243452 Msa0145560:CDS 30.0%
AGCCTCTTGTGTAAAAAATA+GGG - chr1_4:5243522-5243541 Msa0145560:CDS 30.0%
!!! TACCCTATTTTTTACACAAG+AGG + chr1_4:5243527-5243546 None:intergenic 30.0%
AAAGAACTAAGTGCAGTTAA+AGG + chr1_4:5243642-5243661 None:intergenic 30.0%
TTGAATTTGCATTGCAATAG+AGG - chr1_4:5243829-5243848 Msa0145560:intron 30.0%
! ATAGATAATTTTGCAGAGCA+AGG + chr1_4:5243965-5243984 None:intergenic 30.0%
CACCATTGTAATTAAAGACA+AGG + chr1_4:5244317-5244336 None:intergenic 30.0%
!!! TCTTATTTTGTCGGAAAATG+CGG - chr1_4:5244393-5244412 Msa0145560:intron 30.0%
!! TTTTCATTGGTAGTTTCAAC+AGG + chr1_4:5244567-5244586 None:intergenic 30.0%
AACTTCATTAACAGACTTCT+TGG + chr1_4:5244895-5244914 None:intergenic 30.0%
AACAGGAAAACAAACTAGTT+TGG + chr1_4:5245130-5245149 None:intergenic 30.0%
GGAATTTATCATAGTGAATC+AGG + chr1_4:5245287-5245306 None:intergenic 30.0%
AATGACAAAAGAAAAGTGGT+TGG + chr1_4:5245382-5245401 None:intergenic 30.0%
! ACCTAAACTCTCCATATTTT+GGG + chr1_4:5245565-5245584 None:intergenic 30.0%
AGAGAAAGTGAGAATTAGTA+GGG - chr1_4:5245624-5245643 Msa0145560:intron 30.0%
!! TTTGTAGAGCATTGCTATTT+GGG - chr1_4:5245739-5245758 Msa0145560:intron 30.0%
CAAGAAATTAAAGACAAACC+GGG + chr1_4:5245833-5245852 None:intergenic 30.0%
GCAAGAAATTAAAGACAAAC+CGG + chr1_4:5245834-5245853 None:intergenic 30.0%
! CAAGCTTTGGCATAAATATA+AGG + chr1_4:5246530-5246549 None:intergenic 30.0%
TTAAACAAAAGGACAAGCTT+TGG + chr1_4:5246543-5246562 None:intergenic 30.0%
AAAAGAGGAGGTAAATGATT+GGG + chr1_4:5246697-5246716 None:intergenic 30.0%
AACAAAATATGGAAAAGAGG+AGG + chr1_4:5246709-5246728 None:intergenic 30.0%
GGTAAATTGAGAATCACAAA+AGG + chr1_4:5246785-5246804 None:intergenic 30.0%
AATTAGGATGGAATTATGGA+TGG + chr1_4:5247012-5247031 None:intergenic 30.0%
! GATTGACTCATTAATTAGGA+TGG + chr1_4:5247024-5247043 None:intergenic 30.0%
! CCAAGATTGACTCATTAATT+AGG + chr1_4:5247028-5247047 None:intergenic 30.0%
CCTAATTAATGAGTCAATCT+TGG - chr1_4:5247025-5247044 Msa0145560:intron 30.0%
CAATAACAATTGGTACTTCT+TGG + chr1_4:5237910-5237929 None:intergenic 30.0%
GTCCATTATAAATCGGTATT+AGG + chr1_4:5247430-5247449 None:intergenic 30.0%
GCATTGTGTCCATTATAAAT+CGG + chr1_4:5247437-5247456 None:intergenic 30.0%
TGATCCTTCGAAAATTCATA+TGG + chr1_4:5247468-5247487 None:intergenic 30.0%
! GTCTGTATTTTCGAACTTAT+AGG - chr1_4:5247642-5247661 Msa0145560:CDS 30.0%
!! GAGCTGATTTTATGTTTCTT+CGG + chr1_4:5247798-5247817 None:intergenic 30.0%
! TTTCAAACTATCATTAGCCT+GGG + chr1_4:5248286-5248305 None:intergenic 30.0%
! TTTTCAAACTATCATTAGCC+TGG + chr1_4:5248287-5248306 None:intergenic 30.0%
!! ACAACTATTCACACTTTTTG+TGG - chr1_4:5248625-5248644 Msa0145560:CDS 30.0%
!! CGTGATAATGACATCAATTT+TGG - chr1_4:5248667-5248686 Msa0145560:CDS 30.0%
AAGGTCTTGATCATCAAAAT+GGG - chr1_4:5248758-5248777 Msa0145560:CDS 30.0%
CAATGAAGATGTATATGTTG+TGG - chr1_4:5248858-5248877 Msa0145560:CDS 30.0%
! TTGATGCATTTTATGCATGT+CGG - chr1_4:5248898-5248917 Msa0145560:CDS 30.0%
! TTTTCCATAACCTTAAACGA+CGG + chr1_4:5249078-5249097 None:intergenic 30.0%
ACCAAATTCGTAATACAAGT+TGG - chr1_4:5249551-5249570 Msa0145560:intron 30.0%
TCCAACTTGTATTACGAATT+TGG + chr1_4:5249555-5249574 None:intergenic 30.0%
TAGCATCATAAGGAAATGTA+GGG + chr1_4:5249650-5249669 None:intergenic 30.0%
! ACAAATTTGGTAGCATCATA+AGG + chr1_4:5249660-5249679 None:intergenic 30.0%
! TTATCTAGACATTTTCTCGA+TGG + chr1_4:5249794-5249813 None:intergenic 30.0%
TCAGATAAACTATATGGATG+CGG + chr1_4:5249846-5249865 None:intergenic 30.0%
CAACTGAAAAGGATACTAAA+AGG + chr1_4:5249958-5249977 None:intergenic 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG + chr1_4:5250052-5250071 None:intergenic 30.0%
! TTGAAATGGCTCAGTTATTT+TGG + chr1_4:5250053-5250072 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr1_4:5250156-5250175 None:intergenic 30.0%
AAAGCAATGGTTGAAATACA+AGG - chr1_4:5250318-5250337 Msa0145560:intron 30.0%
AAGCAATGGTTGAAATACAA+GGG - chr1_4:5250319-5250338 Msa0145560:intron 30.0%
! TGCTATTTGGATCTAGTAAA+AGG - chr1_4:5250440-5250459 Msa0145560:CDS 30.0%
AGCAACGTTCAAAAACAATT+TGG - chr1_4:5250473-5250492 Msa0145560:CDS 30.0%
GCAACGTTCAAAAACAATTT+GGG - chr1_4:5250474-5250493 Msa0145560:CDS 30.0%
CTTGTCAAAACAAAAAGTGA+TGG - chr1_4:5251056-5251075 Msa0145560:intron 30.0%
GAACACAAAATAGCAAATCA+TGG - chr1_4:5251088-5251107 Msa0145560:intron 30.0%
GAAATGGATGAACTGAAAAT+GGG + chr1_4:5232817-5232836 None:intergenic 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_4:5232818-5232837 None:intergenic 30.0%
GGATAGAGAATTTAAAAGGT+GGG + chr1_4:5251270-5251289 None:intergenic 30.0%
AGGATAGAGAATTTAAAAGG+TGG + chr1_4:5251271-5251290 None:intergenic 30.0%
GCAGTTAAAGGAAATGTAAA+AGG + chr1_4:5251291-5251310 None:intergenic 30.0%
! ATTTTCTTCAGTGCAGTTAA+AGG + chr1_4:5251303-5251322 None:intergenic 30.0%
! CACTCAATTTTGTTAACTGA+GGG - chr1_4:5251429-5251448 Msa0145560:intron 30.0%
TTGGATAGGAGAATAGTTTA+GGG - chr1_4:5251465-5251484 Msa0145560:intron 30.0%
!!! TGAAGAAAGTTTTGAGCTTT+TGG - chr1_4:5235702-5235721 Msa0145560:intron 30.0%
!!! AAGTTTTGAGCTTTTGGTTA+TGG - chr1_4:5251634-5251653 Msa0145560:intron 30.0%
CAATGTTTCTTACTCTTAAC+TGG - chr1_4:5251884-5251903 Msa0145560:intron 30.0%
! AAATTGTCCGAGAATGTTTT+AGG + chr1_4:5251937-5251956 None:intergenic 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_4:5242954-5242973 Msa0145560:three_prime_UTR 30.0%
GTTTCAAAAGTTAGAGCTAA+AGG + chr1_4:5252345-5252364 None:intergenic 30.0%
ACCAAAAGAAGCTAATTCTT+GGG - chr1_4:5252464-5252483 Msa0145560:intron 30.0%
! ACTATAACTTTTGGATGTCA+TGG - chr1_4:5252544-5252563 Msa0145560:intron 30.0%
!!! ACTAGATTTTCGTATCGATT+GGG + chr1_4:5252733-5252752 None:intergenic 30.0%
GTTAGAATTAGTTGGTTAGT+TGG - chr1_4:5252996-5253015 Msa0145560:intron 30.0%
!! GGATGAATCATTGTTTTGTT+TGG - chr1_4:5253067-5253086 Msa0145560:intron 30.0%
! ATTGTTTGATTTCTGTGTAG+AGG - chr1_4:5253097-5253116 Msa0145560:intron 30.0%
CCAGAAGTAAGAAATTAAAG+AGG + chr1_4:5253190-5253209 None:intergenic 30.0%
! CCTCTTTAATTTCTTACTTC+TGG - chr1_4:5253187-5253206 Msa0145560:intron 30.0%
AAAGTTATCAAGAAGTGATG+AGG - chr1_4:5253360-5253379 Msa0145560:intron 30.0%
! ATCTTTTTATGTATGGAGGA+TGG - chr1_4:5253608-5253627 Msa0145560:intron 30.0%
AGAATAGTTCAAATCTACCA+AGG + chr1_4:5247045-5247064 None:intergenic 30.0%
ATTGGTACTTCTTGAAGAAA+TGG + chr1_4:5253885-5253904 None:intergenic 30.0%
CTTCAAATGGGAAATATTTG+AGG + chr1_4:5253980-5253999 None:intergenic 30.0%
TCTATGGCACATCTTAAAAA+AGG - chr1_4:5254118-5254137 Msa0145560:intron 30.0%
ATAATATGAAGGGAGAATGT+TGG - chr1_4:5254161-5254180 Msa0145560:intron 30.0%
CATGCCAATAACATTAAGAT+TGG - chr1_4:5254256-5254275 Msa0145560:intron 30.0%
! GTTTCATATGCTCATTTTGA+TGG + chr1_4:5254387-5254406 None:intergenic 30.0%
! AGACAGATGAATCAATTTTG+TGG - chr1_4:5254465-5254484 Msa0145560:intron 30.0%
TGATATGAACTACAAAGCAA+TGG + chr1_4:5254564-5254583 None:intergenic 30.0%
!! CTTCTAAAACAACTTGAAGA+CGG - chr1_4:5254651-5254670 Msa0145560:intron 30.0%
ATTAGAGTCACTTGCATAAT+CGG - chr1_4:5254680-5254699 Msa0145560:intron 30.0%
ATGTACATTTAGTGGTTTGA+TGG - chr1_4:5254740-5254759 Msa0145560:intron 30.0%
! CATTTTGTTACGACTTTCTT+TGG + chr1_4:5255314-5255333 None:intergenic 30.0%
!! TCTTTGAGACTGTTGAAAAA+TGG + chr1_4:5255444-5255463 None:intergenic 30.0%
!! ATTTTTCAACAGTCTCAAAG+AGG - chr1_4:5255443-5255462 Msa0145560:intron 30.0%
! AACTTGACCATATTTCTGAT+TGG - chr1_4:5255737-5255756 Msa0145560:intron 30.0%
! ACCATATTTCTGATTGGTTA+AGG - chr1_4:5255743-5255762 Msa0145560:intron 30.0%
ACCTTAACCAATCAGAAATA+TGG + chr1_4:5255747-5255766 None:intergenic 30.0%
! TATTTCTGATTGGTTAAGGT+TGG - chr1_4:5255747-5255766 Msa0145560:intron 30.0%
! ATTTCTGATTGGTTAAGGTT+GGG - chr1_4:5255748-5255767 Msa0145560:intron 30.0%
CTTACCATATCAAATTTACG+TGG - chr1_4:5255900-5255919 Msa0145560:intron 30.0%
AAACCCACGTAAATTTGATA+TGG + chr1_4:5255907-5255926 None:intergenic 30.0%
GAAAATGGGTGTTAAACAAA+TGG - chr1_4:5255980-5255999 Msa0145560:intron 30.0%
TGAAATGGATGAACTGAAAA+TGG + chr1_4:5232818-5232837 None:intergenic 30.0%
TGTTTCATTTAGAAGATGGA+AGG + chr1_4:5256324-5256343 None:intergenic 30.0%
TGATTTCAGCAATGATTTAC+AGG + chr1_4:5256504-5256523 None:intergenic 30.0%
AGATGATACTGTTTACTTCA+CGG - chr1_4:5256707-5256726 Msa0145560:intron 30.0%
TTCCTTGTCTTTAAGTACAA+TGG - chr1_4:5242954-5242973 Msa0145560:three_prime_UTR 30.0%
GTTTGTAGTTTCAAAAGGTA+CGG + chr1_4:5257027-5257046 None:intergenic 30.0%
! AACAGAAAGACTTTTAATGC+TGG - chr1_4:5257044-5257063 Msa0145560:intron 30.0%
TTAGGACCATTATAAAAAGG+GGG + chr1_4:5257431-5257450 None:intergenic 30.0%
CTTAGGACCATTATAAAAAG+GGG + chr1_4:5257432-5257451 None:intergenic 30.0%
GCTTAGGACCATTATAAAAA+GGG + chr1_4:5257433-5257452 None:intergenic 30.0%
TTATCAGTATCAAATGACAC+AGG - chr1_4:5257458-5257477 Msa0145560:intron 30.0%
ATCTGGATTTGATACTAAAC+TGG - chr1_4:5257489-5257508 Msa0145560:intron 30.0%
ACATGTAGTGTGTATCAATA+TGG - chr1_4:5257527-5257546 Msa0145560:intron 30.0%
TGGTTGATTACTCTAAGTAT+AGG + chr1_4:5257618-5257637 None:intergenic 30.0%
AACAAAATATGGAAAAGAGG+AGG + chr1_4:5246709-5246728 None:intergenic 30.0%
! CATCTTTTATATATGGAGGA+TGG - chr1_4:5258012-5258031 Msa0145560:intron 30.0%
AGAATAGTTCAAATCTACCA+AGG + chr1_4:5247045-5247064 None:intergenic 30.0%
! GTTTCATATGCTCATTTTGA+TGG + chr1_4:5254387-5254406 None:intergenic 30.0%
TGATATGAACTAAAAAGCAG+TGG + chr1_4:5258915-5258934 None:intergenic 30.0%
ATGAAAGTGACTCTAATAGT+TGG + chr1_4:5258980-5258999 None:intergenic 30.0%
CGTATTTCATGTACATTTAG+TGG - chr1_4:5259034-5259053 Msa0145560:CDS 30.0%
! TGCATGTACTTACAAGTTGA+TGG + chr1_4:5232869-5232888 None:intergenic 35.0%
!! AAGGGAAAATAGGGTTTTAG+AGG - chr1_4:5233089-5233108 Msa0145560:intron 35.0%
!!! AGGGAAAATAGGGTTTTAGA+GGG - chr1_4:5233090-5233109 Msa0145560:intron 35.0%
ACAAAATTCCCTCAAATTGG+AGG + chr1_4:5233329-5233348 None:intergenic 35.0%
AATCTCACAAACAGAGTCTT+AGG - chr1_4:5233364-5233383 Msa0145560:intron 35.0%
ATCTCACAAACAGAGTCTTA+GGG - chr1_4:5233365-5233384 Msa0145560:intron 35.0%
AATATAGGGCTTACAACTAG+AGG - chr1_4:5233712-5233731 Msa0145560:intron 35.0%
AAGGAAATCATTCTGCTTCA+AGG + chr1_4:5233788-5233807 None:intergenic 35.0%
TGGAAATACTTTCTGTGAGA+AGG - chr1_4:5233855-5233874 Msa0145560:intron 35.0%
TTCACCTGAAAAATTATGGG+CGG - chr1_4:5233945-5233964 Msa0145560:intron 35.0%
CAAAATTGGTGTGAAGCAAT+AGG + chr1_4:5234011-5234030 None:intergenic 35.0%
ACATGGAAGGAAAGAAAAAG+AGG + chr1_4:5234076-5234095 None:intergenic 35.0%
GAATGTAATGATGAAGGAGA+TGG + chr1_4:5234414-5234433 None:intergenic 35.0%
GGTTATAGGAAGATTGATGA+AGG + chr1_4:5234442-5234461 None:intergenic 35.0%
AAACTAGAACAGAAAAGGTG+AGG - chr1_4:5235034-5235053 Msa0145560:intron 35.0%
TACATGAACCAAGTGATGAT+TGG - chr1_4:5235088-5235107 Msa0145560:intron 35.0%
TTGCTGAAATTCTGTTGTTG+AGG - chr1_4:5235253-5235272 Msa0145560:intron 35.0%
! TGAGGTTGTTGTTGTTGTAT+AGG - chr1_4:5235271-5235290 Msa0145560:intron 35.0%
!! ACAATTGATTTGGATGGATC+TGG - chr1_4:5235325-5235344 Msa0145560:intron 35.0%
GTAAACGGAGAGTTACTTAT+GGG - chr1_4:5235530-5235549 Msa0145560:intron 35.0%
ATTGGATACGCTGTTAAAGT+TGG - chr1_4:5235757-5235776 Msa0145560:intron 35.0%
ATGAGTTTACATTGCAAGAG+AGG - chr1_4:5235913-5235932 Msa0145560:intron 35.0%
TTCCTTGTCTGTAAGTACAA+TGG - chr1_4:5236375-5236394 Msa0145560:intron 35.0%
ATCACCAAAAGCTGCTAATT+GGG - chr1_4:5236662-5236681 Msa0145560:intron 35.0%
! CACTAGATATTCGTATTGAC+TGG + chr1_4:5236783-5236802 None:intergenic 35.0%
GGAGAGAGGAATATATATAG+AGG + chr1_4:5237064-5237083 None:intergenic 35.0%
!! TCGAGATAAAAGTGCTTAGT+TGG + chr1_4:5237122-5237141 None:intergenic 35.0%
! TCTCGAGTGTTGTCAAATAT+CGG - chr1_4:5237136-5237155 Msa0145560:intron 35.0%
!!! GTGGTGGATTTTTTAACAAC+CGG - chr1_4:5237174-5237193 Msa0145560:intron 35.0%
AGAAGTAGTATTATCGATGG+CGG + chr1_4:5237296-5237315 None:intergenic 35.0%
TAGTTCAAACATTCACAAGG+AGG + chr1_4:5237423-5237442 None:intergenic 35.0%
TTGGGCTATAAGAAAAGTCA+AGG + chr1_4:5237459-5237478 None:intergenic 35.0%
CAGAATGAAATCAAATGCAG+TGG + chr1_4:5237487-5237506 None:intergenic 35.0%
! CACTGCATTTGATTTCATTC+TGG - chr1_4:5237485-5237504 Msa0145560:intron 35.0%
!! AGACAAGTATCAGTTTGCTA+GGG + chr1_4:5237546-5237565 None:intergenic 35.0%
! TAGACAAGTATCAGTTTGCT+AGG + chr1_4:5237547-5237566 None:intergenic 35.0%
TAGCAAACTGATACTTGTCT+AGG - chr1_4:5237546-5237565 Msa0145560:intron 35.0%
GAAATGAGGAGGAAAATGAT+TGG + chr1_4:5237760-5237779 None:intergenic 35.0%
ATTAAAGCCTTCAATGTCAG+TGG - chr1_4:5237797-5237816 Msa0145560:intron 35.0%
ATAGGAAACATTTGAGGAGA+AGG + chr1_4:5237991-5238010 None:intergenic 35.0%
! TATACCCCATCAATTTTCGA+CGG - chr1_4:5238126-5238145 Msa0145560:intron 35.0%
AAAATTTGAAGGGAGAACAC+TGG - chr1_4:5238185-5238204 Msa0145560:intron 35.0%
!! AAAAGCTAGTCTTTCAACGA+GGG + chr1_4:5238390-5238409 None:intergenic 35.0%
!! TAAAAGCTAGTCTTTCAACG+AGG + chr1_4:5238391-5238410 None:intergenic 35.0%
ATATATATCACCATGGGTGA+AGG + chr1_4:5238529-5238548 None:intergenic 35.0%
TGTTATGCATATGACACTTG+TGG + chr1_4:5238663-5238682 None:intergenic 35.0%
CTTGTTTGTCATAAGAGACT+AGG - chr1_4:5238688-5238707 Msa0145560:intron 35.0%
! GCCTTTCAACTTAAAGCATT+TGG + chr1_4:5238825-5238844 None:intergenic 35.0%
GAGATGGAGTTTATGAACAT+TGG + chr1_4:5239229-5239248 None:intergenic 35.0%
TCATAAACTCCATCTCTAGA+TGG - chr1_4:5239233-5239252 Msa0145560:intron 35.0%
CATAAACTCCATCTCTAGAT+GGG - chr1_4:5239234-5239253 Msa0145560:intron 35.0%
CTTGTGAATCATTGCAACTA+AGG + chr1_4:5239365-5239384 None:intergenic 35.0%
CTTAGTTGCAATGATTCACA+AGG - chr1_4:5239363-5239382 Msa0145560:intron 35.0%
! TCTGAAACAATGTAGAATGG+TGG + chr1_4:5239534-5239553 None:intergenic 35.0%
!! CTCTCTGAAACAATGTAGAA+TGG + chr1_4:5239537-5239556 None:intergenic 35.0%
CATTCTACATTGTTTCAGAG+AGG - chr1_4:5239535-5239554 Msa0145560:intron 35.0%
TATTGACAATTGCCCTCAAT+AGG + chr1_4:5239963-5239982 None:intergenic 35.0%
TGTTGAGTCTATTGAAGAAG+TGG - chr1_4:5240026-5240045 Msa0145560:intron 35.0%
ATTCATAGAACATACAGGGA+GGG + chr1_4:5240108-5240127 None:intergenic 35.0%
GACCATTCATAGAACATACA+GGG + chr1_4:5240112-5240131 None:intergenic 35.0%
AGACCATTCATAGAACATAC+AGG + chr1_4:5240113-5240132 None:intergenic 35.0%
GTATGTTCTATGAATGGTCT+TGG - chr1_4:5240113-5240132 Msa0145560:intron 35.0%
! ATGGTTTGGAGATTACTTGA+AGG - chr1_4:5240432-5240451 Msa0145560:intron 35.0%
! TGGTTTGGAGATTACTTGAA+GGG - chr1_4:5240433-5240452 Msa0145560:intron 35.0%
AAGGGATTCTAACAGCTAAA+GGG - chr1_4:5240451-5240470 Msa0145560:intron 35.0%
AACACAAGGCATATCATGAA+TGG + chr1_4:5240523-5240542 None:intergenic 35.0%
TCGGTTGAGTTAAAAACACA+AGG + chr1_4:5240537-5240556 None:intergenic 35.0%
CAAGGTGTAAAGCATAATGA+AGG - chr1_4:5240662-5240681 Msa0145560:intron 35.0%
! CGTAATTTGAAGTCTTTGGT+TGG - chr1_4:5240752-5240771 Msa0145560:intron 35.0%
AGAGTTATGACAGATCTCAA+AGG + chr1_4:5241118-5241137 None:intergenic 35.0%
! TGAAATTGTTGAAAAGTGCG+AGG + chr1_4:5241285-5241304 None:intergenic 35.0%
! AAGTTGTTGTTGAAAATCGG+TGG + chr1_4:5241419-5241438 None:intergenic 35.0%
!! AAAGCAAGTTGGTTCATGAA+GGG + chr1_4:5241641-5241660 None:intergenic 35.0%
CCTATATAAATTCTCACACC+GGG + chr1_4:5241698-5241717 None:intergenic 35.0%
CACATTGCAATAGAATCTGT+TGG - chr1_4:5241777-5241796 Msa0145560:intron 35.0%
CATTGCAATAGAATCTGTTG+GGG - chr1_4:5241779-5241798 Msa0145560:intron 35.0%
! ATAGAATCTGTTGGGGATTT+TGG - chr1_4:5241786-5241805 Msa0145560:intron 35.0%
! TAGAATCTGTTGGGGATTTT+GGG - chr1_4:5241787-5241806 Msa0145560:intron 35.0%
CCACAAAAGTTTGATTCTGT+TGG + chr1_4:5241963-5241982 None:intergenic 35.0%
! CCAACAGAATCAAACTTTTG+TGG - chr1_4:5241960-5241979 Msa0145560:intron 35.0%
! TTGTCTAAAACAAAAGGCAC+AGG - chr1_4:5242020-5242039 Msa0145560:intron 35.0%
! TGTCTAAAACAAAAGGCACA+GGG - chr1_4:5242021-5242040 Msa0145560:intron 35.0%
TCTTGAGTGATTATGAAGTG+AGG - chr1_4:5242117-5242136 Msa0145560:intron 35.0%
CTTGAGTGATTATGAAGTGA+GGG - chr1_4:5242118-5242137 Msa0145560:intron 35.0%
TTGAGTGATTATGAAGTGAG+GGG - chr1_4:5242119-5242138 Msa0145560:intron 35.0%
GAGAGGAAATGAGAGAAATT+AGG - chr1_4:5242146-5242165 Msa0145560:intron 35.0%
GAGAAATTAGGGATTTCTCT+TGG - chr1_4:5242158-5242177 Msa0145560:intron 35.0%
! GATTTCTCTTGGTGATCAAT+TGG - chr1_4:5242169-5242188 Msa0145560:intron 35.0%
! TTTCTCTTGGTGATCAATTG+GGG - chr1_4:5242171-5242190 Msa0145560:intron 35.0%
GATCAATTGGGGATATTTCT+TGG - chr1_4:5242182-5242201 Msa0145560:intron 35.0%
TCTCTTGAGAGAAAGAGAAA+AGG - chr1_4:5242218-5242237 Msa0145560:intron 35.0%
TTGAGAGAAAGAGAAAAGGT+AGG - chr1_4:5242222-5242241 Msa0145560:intron 35.0%
GGTATGTTCATGTTGAACAT+TGG - chr1_4:5242251-5242270 Msa0145560:intron 35.0%
ATGTTCATGTTGAACATTGG+AGG - chr1_4:5242254-5242273 Msa0145560:intron 35.0%
GTGTTGAATCGTTATTTGCT+TGG - chr1_4:5242437-5242456 Msa0145560:intron 35.0%
!!! TTGTTGGTTTTAACAACGAG+TGG - chr1_4:5242501-5242520 Msa0145560:intron 35.0%
AGTGGTTTGAATTCACAACA+GGG - chr1_4:5242519-5242538 Msa0145560:intron 35.0%
CAATGTTTCTTAGTCTCAAC+TGG - chr1_4:5242736-5242755 Msa0145560:intron 35.0%
!!! GTCTGAAAATGTTTTGGGAA+GGG + chr1_4:5242784-5242803 None:intergenic 35.0%
!!! TGTCTGAAAATGTTTTGGGA+AGG + chr1_4:5242785-5242804 None:intergenic 35.0%
CCATCCATTTGTGAAGTAAA+TGG + chr1_4:5242895-5242914 None:intergenic 35.0%
CCATTTACTTCACAAATGGA+TGG - chr1_4:5242892-5242911 Msa0145560:three_prime_UTR 35.0%
CCTTGTCTTTAAGTACAATG+GGG - chr1_4:5242956-5242975 Msa0145560:three_prime_UTR 35.0%
!!! AAGGCAGCTTCTTATTTTGT+TGG - chr1_4:5243026-5243045 Msa0145560:exon 35.0%
TACAACATGAAAGGAAAGAG+TGG + chr1_4:5243280-5243299 None:intergenic 35.0%
CAGCCTCTTGTGTAAAAAAT+AGG - chr1_4:5243521-5243540 Msa0145560:CDS 35.0%
GTACAAAACACCAAAATGGT+GGG - chr1_4:5243554-5243573 Msa0145560:CDS 35.0%
! AATAATGGGAACTGTGACAT+TGG - chr1_4:5243745-5243764 Msa0145560:intron 35.0%
AGTGCTTAAATGTAGATGCA+TGG + chr1_4:5243857-5243876 None:intergenic 35.0%
!! TTCATGCTTTTGTGGCTTTA+AGG - chr1_4:5243878-5243897 Msa0145560:CDS 35.0%
!! GTGGCTTTAAGGAAAAGAAA+AGG - chr1_4:5243889-5243908 Msa0145560:CDS 35.0%
GAAGAATCTAAGAGTGATGT+TGG + chr1_4:5244070-5244089 None:intergenic 35.0%
GAAGTCAATACTGCTTCTAA+TGG - chr1_4:5236537-5236556 Msa0145560:intron 35.0%
TTCTGATGTAGTCACTATAG+CGG - chr1_4:5244842-5244861 Msa0145560:intron 35.0%
!! TAACAGACTTCTTGGTCTTT+TGG + chr1_4:5244887-5244906 None:intergenic 35.0%
! ACCTCTAGTGTTTTTCTACT+TGG - chr1_4:5245241-5245260 Msa0145560:intron 35.0%
TCCAAGTAGAAAAACACTAG+AGG + chr1_4:5245245-5245264 None:intergenic 35.0%
AATCACACTGTACCTAAACT+TGG - chr1_4:5245321-5245340 Msa0145560:intron 35.0%
AAGGGAATAAGCCCAAAATA+TGG - chr1_4:5245551-5245570 Msa0145560:intron 35.0%
! CACCTAAACTCTCCATATTT+TGG + chr1_4:5245566-5245585 None:intergenic 35.0%
ATAAAAGAGAGAATGAGAGG+TGG - chr1_4:5245596-5245615 Msa0145560:intron 35.0%
GAGAGAAAGTGAGAATTAGT+AGG - chr1_4:5245623-5245642 Msa0145560:intron 35.0%
GAGAAAGTGAGAATTAGTAG+GGG - chr1_4:5245625-5245644 Msa0145560:intron 35.0%
GTAGGGGATTTAGTTATATG+AGG - chr1_4:5245641-5245660 Msa0145560:intron 35.0%
GGGATTTAGTTATATGAGGT+GGG - chr1_4:5245645-5245664 Msa0145560:intron 35.0%
!! GGAAGAATCATTGTTTTGCT+TGG - chr1_4:5245694-5245713 Msa0145560:intron 35.0%
AGACAAAACACGCAATTCAA+TGG + chr1_4:5245720-5245739 None:intergenic 35.0%
!! CTTTGTAGAGCATTGCTATT+TGG - chr1_4:5245738-5245757 Msa0145560:intron 35.0%
GGAACGTGAGTATTTATTGA+TGG + chr1_4:5245800-5245819 None:intergenic 35.0%
!! TTTCTTGCTTCTGTTGTTTC+TGG - chr1_4:5245846-5245865 Msa0145560:intron 35.0%
ATTCTCTTATTGGAGGATAG+TGG - chr1_4:5245961-5245980 Msa0145560:intron 35.0%
CTGGTTAAATTGGAAACACA+TGG + chr1_4:5246051-5246070 None:intergenic 35.0%
CATGTGTTTCCAATTTAACC+AGG - chr1_4:5246049-5246068 Msa0145560:intron 35.0%
!! ATCTCTCCTTTTAACTCTAG+AGG + chr1_4:5246077-5246096 None:intergenic 35.0%
TCTGGTTAATGGTTGCTTAA+GGG - chr1_4:5246162-5246181 Msa0145560:intron 35.0%
TGATGCTGTTACTGAAATCA+TGG - chr1_4:5246211-5246230 Msa0145560:intron 35.0%
GATGCTGTTACTGAAATCAT+GGG - chr1_4:5246212-5246231 Msa0145560:intron 35.0%
TGAAATCATGGGTAATCAAG+CGG - chr1_4:5246223-5246242 Msa0145560:intron 35.0%
!! ATAGGCTCTTCTAAAGCTAA+TGG - chr1_4:5246340-5246359 Msa0145560:intron 35.0%
!! TAGGCTCTTCTAAAGCTAAT+GGG - chr1_4:5246341-5246360 Msa0145560:intron 35.0%
! AACAGCCTTTGATTTCATTC+TGG - chr1_4:5246421-5246440 Msa0145560:intron 35.0%
! ACAGCCTTTGATTTCATTCT+GGG - chr1_4:5246422-5246441 Msa0145560:intron 35.0%
TAGACCCAGAATGAAATCAA+AGG + chr1_4:5246429-5246448 None:intergenic 35.0%
!! AGACAAGTATCAGTTTGCTA+GGG + chr1_4:5237546-5237565 None:intergenic 35.0%
! TAGACAAGTATCAGTTTGCT+AGG + chr1_4:5237547-5237566 None:intergenic 35.0%
TAGCAAACTGATACTTGTCT+AGG - chr1_4:5237546-5237565 Msa0145560:intron 35.0%
GAAAAGAGGAGGTAAATGAT+TGG + chr1_4:5246698-5246717 None:intergenic 35.0%
CACGAGTTACTTAAAGATGA+GGG + chr1_4:5246836-5246855 None:intergenic 35.0%
ACACGAGTTACTTAAAGATG+AGG + chr1_4:5246837-5246856 None:intergenic 35.0%
TCATCTTTAAGTAACTCGTG+TGG - chr1_4:5246836-5246855 Msa0145560:CDS 35.0%
GCTTGAGAAACTGATATTGT+TGG - chr1_4:5246869-5246888 Msa0145560:CDS 35.0%
!! CTACTTTTATGTATGGAGGA+TGG - chr1_4:5246922-5246941 Msa0145560:CDS 35.0%
ATTTGCACTTCAATGCATGT+TGG - chr1_4:5247068-5247087 Msa0145560:CDS 35.0%
ATTTCAATACCTAGCGAAGA+TGG - chr1_4:5247097-5247116 Msa0145560:CDS 35.0%
TTATGTCATAGCAGTGGAAA+AGG + chr1_4:5247183-5247202 None:intergenic 35.0%
AATGTGTTATGTCATAGCAG+TGG + chr1_4:5247189-5247208 None:intergenic 35.0%
ATAATTTGAAGGGAGAACAG+TGG - chr1_4:5247520-5247539 Msa0145560:CDS 35.0%
TACAGACATCTCCAATCTTT+AGG + chr1_4:5247629-5247648 None:intergenic 35.0%
ATCAATGAGGTTGGAAAAGA+TGG - chr1_4:5247687-5247706 Msa0145560:intron 35.0%
TCAATGAGGTTGGAAAAGAT+GGG - chr1_4:5247688-5247707 Msa0145560:intron 35.0%
GCATAAATCTGGAAGTCTTA+TGG + chr1_4:5247776-5247795 None:intergenic 35.0%
ATGTTTCTTCGGCATAAATC+TGG + chr1_4:5247787-5247806 None:intergenic 35.0%
TCCTCTGAGTTAAAGAAATC+CGG - chr1_4:5247885-5247904 Msa0145560:intron 35.0%
AGCTTCAAATACTTCGAAGA+AGG - chr1_4:5247911-5247930 Msa0145560:intron 35.0%
AAAAGCTGCCCATAAAAAGT+CGG - chr1_4:5247953-5247972 Msa0145560:intron 35.0%
! AACCATACCCGACTTTTTAT+GGG + chr1_4:5247964-5247983 None:intergenic 35.0%
! AAACCATACCCGACTTTTTA+TGG + chr1_4:5247965-5247984 None:intergenic 35.0%
TAGTGAAAGAAAGAACCCAA+AGG - chr1_4:5248139-5248158 Msa0145560:intron 35.0%
GACTGAAGTCATAATTTGGA+AGG + chr1_4:5248199-5248218 None:intergenic 35.0%
ATGGGACTGAAGTCATAATT+TGG + chr1_4:5248203-5248222 None:intergenic 35.0%
ATGAAGAAGTTCAATGTCTG+TGG - chr1_4:5248378-5248397 Msa0145560:intron 35.0%
TAACTTCTGTATTGCAAGCA+GGG + chr1_4:5248543-5248562 None:intergenic 35.0%
TTGTTTCCCCTTGAACATAT+GGG + chr1_4:5248609-5248628 None:intergenic 35.0%
!! ACTATTCACACTTTTTGTGG+CGG - chr1_4:5248628-5248647 Msa0145560:CDS 35.0%
GATGTCATTATCACGAACAA+AGG + chr1_4:5248662-5248681 None:intergenic 35.0%
GAAGGTCTTGATCATCAAAA+TGG - chr1_4:5248757-5248776 Msa0145560:CDS 35.0%
CTCATAATAACCGTCGTTTA+AGG - chr1_4:5249065-5249084 Msa0145560:intron 35.0%
! ATAACCGTCGTTTAAGGTTA+TGG - chr1_4:5249071-5249090 Msa0145560:intron 35.0%
GTAGCATCATAAGGAAATGT+AGG + chr1_4:5249651-5249670 None:intergenic 35.0%
!! CTTTGAAACGGTTAAGTACA+TGG + chr1_4:5249719-5249738 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr1_4:5250017-5250036 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr1_4:5250185-5250204 Msa0145560:intron 35.0%
AGGGCAATTTAACCCTTAAT+TGG - chr1_4:5250338-5250357 Msa0145560:intron 35.0%
TTAACCCTTAATTGGAGTCA+AGG - chr1_4:5250346-5250365 Msa0145560:intron 35.0%
ATGCAGTTACAAAGGCTTAA+AGG - chr1_4:5250956-5250975 Msa0145560:intron 35.0%
TGCAGTTACAAAGGCTTAAA+GGG - chr1_4:5250957-5250976 Msa0145560:intron 35.0%
TTCACGAGGAAGAACATAAA+TGG + chr1_4:5250988-5251007 None:intergenic 35.0%
! AAACAAAAAGTGATGGGAGA+AGG - chr1_4:5251063-5251082 Msa0145560:intron 35.0%
ACAAAATAGCAAATCATGGG+AGG - chr1_4:5251092-5251111 Msa0145560:intron 35.0%
! AAGTTGTTGTTGAAAATCGG+TGG + chr1_4:5241419-5241438 None:intergenic 35.0%
CCTCAGTTAACAAAATTGAG+TGG + chr1_4:5251431-5251450 None:intergenic 35.0%
! CCACTCAATTTTGTTAACTG+AGG - chr1_4:5251428-5251447 Msa0145560:intron 35.0%
! TCAATTTTGTTAACTGAGGG+AGG - chr1_4:5251432-5251451 Msa0145560:intron 35.0%
! CAATTTTGTTAACTGAGGGA+GGG - chr1_4:5251433-5251452 Msa0145560:intron 35.0%
GTTGGATAGGAGAATAGTTT+AGG - chr1_4:5251464-5251483 Msa0145560:intron 35.0%
AAAAGAACAAGCTGCAGTTA+AGG + chr1_4:5251609-5251628 None:intergenic 35.0%
GGCTGAAAAGAAAGTGAAAA+AGG - chr1_4:5251692-5251711 Msa0145560:intron 35.0%
CTGAAGAATCTAAGAGATGA+TGG + chr1_4:5251862-5251881 None:intergenic 35.0%
AATATAGGGCTGAATACTAC+AGG - chr1_4:5252012-5252031 Msa0145560:intron 35.0%
CACCATTGTACTTAAAGACA+AGG + chr1_4:5252107-5252126 None:intergenic 35.0%
ACAAGCTCATACTAAACAAG+CGG - chr1_4:5252206-5252225 Msa0145560:intron 35.0%
!! AGGAGTATTGACTTCTTCAA+CGG + chr1_4:5252259-5252278 None:intergenic 35.0%
GAAGAAGTCAATACTCCTAA+TGG - chr1_4:5252261-5252280 Msa0145560:intron 35.0%
TTCTTGCTTGCTTATTAGTC+TGG + chr1_4:5252443-5252462 None:intergenic 35.0%
CACCAAAAGAAGCTAATTCT+TGG - chr1_4:5252463-5252482 Msa0145560:intron 35.0%
!! TCCCAAGAATTAGCTTCTTT+TGG + chr1_4:5252468-5252487 None:intergenic 35.0%
! ACTAGTTTGCACAATGAACA+TGG + chr1_4:5252617-5252636 None:intergenic 35.0%
! TAGTTTTTCCCCCTCTTTAA+TGG - chr1_4:5252633-5252652 Msa0145560:intron 35.0%
GATAATCATAAACCACGCTT+AGG + chr1_4:5252660-5252679 None:intergenic 35.0%
TTATCAGTATCTAGCGATAC+AGG - chr1_4:5252675-5252694 Msa0145560:intron 35.0%
!! CACTAGATTTTCGTATCGAT+TGG + chr1_4:5252734-5252753 None:intergenic 35.0%
AAGGTAATAAGCCCAAAGTA+TGG - chr1_4:5252915-5252934 Msa0145560:intron 35.0%
GCATAAACTCTCCATACTTT+GGG + chr1_4:5252929-5252948 None:intergenic 35.0%
GAAAAGAGAGAATGATGAGA+TGG - chr1_4:5252961-5252980 Msa0145560:intron 35.0%
GAGGGAAAGTTAGAATTAGT+TGG - chr1_4:5252988-5253007 Msa0145560:intron 35.0%
!! TAGTTGGTTAGTTGGTGATT+CGG - chr1_4:5253004-5253023 Msa0145560:intron 35.0%
CACATTTCATTTGCGATTCT+CGG - chr1_4:5253161-5253180 Msa0145560:intron 35.0%
!! TGACAAGTATCAGTTTGCTA+GGG + chr1_4:5253234-5253253 None:intergenic 35.0%
! ATGACAAGTATCAGTTTGCT+AGG + chr1_4:5253235-5253254 None:intergenic 35.0%
TAGCAAACTGATACTTGTCA+TGG - chr1_4:5253234-5253253 Msa0145560:intron 35.0%
TTAAGAAAAAGGATAGGCTC+TGG + chr1_4:5253295-5253314 None:intergenic 35.0%
AATTGTTCAATTCCACACAG+AGG - chr1_4:5253327-5253346 Msa0145560:intron 35.0%
ATTTGCTTGAGAAACTGATC+TGG - chr1_4:5253551-5253570 Msa0145560:intron 35.0%
!!! TCTTTGAGACCATCTTTTAC+TGG + chr1_4:5253677-5253696 None:intergenic 35.0%
GCATCATACGAAATTATGGA+TGG + chr1_4:5253705-5253724 None:intergenic 35.0%
ACAGGCATCATACGAAATTA+TGG + chr1_4:5253709-5253728 None:intergenic 35.0%
! GTTGACTCATTAATTAGGAC+AGG + chr1_4:5253727-5253746 None:intergenic 35.0%
! CCAAGGTTGACTCATTAATT+AGG + chr1_4:5253732-5253751 None:intergenic 35.0%
CCTAATTAATGAGTCAACCT+TGG - chr1_4:5253729-5253748 Msa0145560:intron 35.0%
TTGACAAACTTCTCAACTAC+TGG - chr1_4:5253834-5253853 Msa0145560:intron 35.0%
! TATACCCCGTCAATTTTCTA+TGG - chr1_4:5254102-5254121 Msa0145560:intron 35.0%
ATGTGCCATAGAAAATTGAC+GGG + chr1_4:5254110-5254129 None:intergenic 35.0%
GATGTGCCATAGAAAATTGA+CGG + chr1_4:5254111-5254130 None:intergenic 35.0%
!!! CGTCTTCAAGTTGTTTTAGA+AGG + chr1_4:5254653-5254672 None:intergenic 35.0%
ATGCAAGTGACTCTAATAGT+TGG + chr1_4:5254677-5254696 None:intergenic 35.0%
ACTTGCATAATCGGTTAATG+CGG - chr1_4:5254689-5254708 Msa0145560:intron 35.0%
! AGTGGTTTGATGGATAAACT+AGG - chr1_4:5254750-5254769 Msa0145560:intron 35.0%
AAAGTAACGTGTCTTTGTCT+TGG + chr1_4:5256104-5256123 None:intergenic 35.0%
CTATTTCATTCTCAAATGGG+AGG - chr1_4:5256172-5256191 Msa0145560:intron 35.0%
TACTCAGAAATTGGGTGAAA+TGG + chr1_4:5256249-5256268 None:intergenic 35.0%
! AAGTTGTTGTTGAAAATGGG+TGG + chr1_4:5256272-5256291 None:intergenic 35.0%
GAACTAACAAGTGCAGTTAA+AGG + chr1_4:5256428-5256447 None:intergenic 35.0%
AACTCCACTAAGACCTTTAA+GGG + chr1_4:5256661-5256680 None:intergenic 35.0%
CACCATTGTACTTAAAGACA+AGG + chr1_4:5252107-5252126 None:intergenic 35.0%
TTCAAAGAATTCTGTCAGAG+AGG - chr1_4:5256920-5256939 Msa0145560:intron 35.0%
CATTCAACACCAGCATTAAA+AGG + chr1_4:5256954-5256973 None:intergenic 35.0%
! TTTAATGCTGGTGTTGAATG+TGG - chr1_4:5256954-5256973 Msa0145560:intron 35.0%
TTAAGACGCTGAAATTTCTC+GGG + chr1_4:5256984-5257003 None:intergenic 35.0%
GTTAAGACGCTGAAATTTCT+CGG + chr1_4:5256985-5257004 None:intergenic 35.0%
! TCGCTAGAATTAGCTTCTTT+GGG + chr1_4:5257221-5257240 None:intergenic 35.0%
ACTATAACATTCTGATGCCA+TGG - chr1_4:5257341-5257360 Msa0145560:intron 35.0%
CTATAACATTCTGATGCCAT+GGG - chr1_4:5257342-5257361 Msa0145560:intron 35.0%
TAGGACCATTATAAAAAGGG+GGG + chr1_4:5257430-5257449 None:intergenic 35.0%
CGCTTAGGACCATTATAAAA+AGG + chr1_4:5257434-5257453 None:intergenic 35.0%
GATACTGATAAAACACGCTT+AGG + chr1_4:5257449-5257468 None:intergenic 35.0%
ACTACATGTTCGTACAGATT+CGG + chr1_4:5257516-5257535 None:intergenic 35.0%
AAAACTGATCATAGGGAATC+AGG + chr1_4:5257573-5257592 None:intergenic 35.0%
AATTGTTCAATTCCACACAG+AGG - chr1_4:5253327-5253346 Msa0145560:intron 35.0%
ACTGTCAAAGTCATCAAGAA+AGG - chr1_4:5257748-5257767 Msa0145560:intron 35.0%
! ATAAAAAAGTTCAGTGTCGG+TGG - chr1_4:5257827-5257846 Msa0145560:CDS 35.0%
!!! TCTTTGAGACCATCTTTTAC+TGG + chr1_4:5253677-5253696 None:intergenic 35.0%
ATCACTATGGGAATTATGGA+TGG + chr1_4:5258102-5258121 None:intergenic 35.0%
CTGTATCACTATGGGAATTA+TGG + chr1_4:5258106-5258125 None:intergenic 35.0%
! GTTGAAGCATTAATAAGGAC+AGG + chr1_4:5258132-5258151 None:intergenic 35.0%
! CCAAGGTTGAAGCATTAATA+AGG + chr1_4:5258137-5258156 None:intergenic 35.0%
CCTTATTAATGCTTCAACCT+TGG - chr1_4:5258134-5258153 Msa0145560:CDS 35.0%
TCTTCCTATTCAACTGTGAT+TGG - chr1_4:5258343-5258362 Msa0145560:intron 35.0%
AATGCCAATCACAGTTGAAT+AGG + chr1_4:5258350-5258369 None:intergenic 35.0%
! TGTACCCTGTGAATTTTCAA+TGG - chr1_4:5258419-5258438 Msa0145560:intron 35.0%
! TGTGCCATTGAAAATTCACA+GGG + chr1_4:5258426-5258445 None:intergenic 35.0%
! ATGTGCCATTGAAAATTCAC+AGG + chr1_4:5258427-5258446 None:intergenic 35.0%
ATAATTTGAAGGGAGAACGT+TGG - chr1_4:5258478-5258497 Msa0145560:intron 35.0%
ATGTACATTTAGTGGCTTGA+TGG - chr1_4:5259042-5259061 Msa0145560:CDS 35.0%
GAAGGAACTCAAAACTGTGT+TGG - chr1_4:5232756-5232775 Msa0145560:three_prime_UTR 40.0%
!! TGTTGGAAGCACCAAATCAT+TGG - chr1_4:5232773-5232792 Msa0145560:three_prime_UTR 40.0%
TGCTCAGAAAAAGGGTGAAA+TGG + chr1_4:5232833-5232852 None:intergenic 40.0%
ATGGGTGATGCTCAGAAAAA+GGG + chr1_4:5232841-5232860 None:intergenic 40.0%
AATGGGTGATGCTCAGAAAA+AGG + chr1_4:5232842-5232861 None:intergenic 40.0%
AACTCGCAAACAAAGCCTAA+AGG + chr1_4:5233061-5233080 None:intergenic 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - chr1_4:5233061-5233080 Msa0145560:intron 40.0%
!! TTTTAGAGGGAAGAGAGTAG+AGG - chr1_4:5233103-5233122 Msa0145560:intron 40.0%
TTTAGAGGGAAGAGAGTAGA+GGG - chr1_4:5233104-5233123 Msa0145560:intron 40.0%
! TTTGGAGTTCCTCCAATTTG+AGG - chr1_4:5233317-5233336 Msa0145560:intron 40.0%
TTGGAGTTCCTCCAATTTGA+GGG - chr1_4:5233318-5233337 Msa0145560:intron 40.0%
AGAGTCTTAGGGTGTGTAAA+AGG - chr1_4:5233376-5233395 Msa0145560:intron 40.0%
GTAAAAGGAGATTGCAGTGT+AGG - chr1_4:5233391-5233410 Msa0145560:intron 40.0%
! GATTGCAGTGTAGGTTTTCT+TGG - chr1_4:5233400-5233419 Msa0145560:intron 40.0%
CCTTTAAGTGTCACATTTGC+TGG + chr1_4:5233673-5233692 None:intergenic 40.0%
CCAGCAAATGTGACACTTAA+AGG - chr1_4:5233670-5233689 Msa0145560:intron 40.0%
ATATTCCACACAATTCCGCT+AGG + chr1_4:5233697-5233716 None:intergenic 40.0%
AGCGGAATTGTGTGGAATAT+AGG - chr1_4:5233697-5233716 Msa0145560:intron 40.0%
GCGGAATTGTGTGGAATATA+GGG - chr1_4:5233698-5233717 Msa0145560:intron 40.0%
CTATTTACTTCACGAACGGT+TGG - chr1_4:5233740-5233759 Msa0145560:intron 40.0%
AATCATTCTGCTTCAAGGAG+TGG + chr1_4:5233783-5233802 None:intergenic 40.0%
CAATGGTGAATCACACTTTG+AGG - chr1_4:5233819-5233838 Msa0145560:intron 40.0%
TATTCAACACCACCACTAGA+AGG + chr1_4:5233922-5233941 None:intergenic 40.0%
! TCTTCCGCCCATAATTTTTC+AGG + chr1_4:5233952-5233971 None:intergenic 40.0%
TCATTCATGTGGAACATGGA+AGG + chr1_4:5234089-5234108 None:intergenic 40.0%
GTAAACGGGGAGTTACTTAT+GGG + chr1_4:5234278-5234297 None:intergenic 40.0%
TGTAATGATGAAGGAGATGG+AGG + chr1_4:5234411-5234430 None:intergenic 40.0%
!! TTTCTTTGTTGTTCTCGGAC+TGG + chr1_4:5234921-5234940 None:intergenic 40.0%
TAAGTATGAATGGACGATGC+CGG - chr1_4:5235144-5235163 Msa0145560:intron 40.0%
TAACTCTCCGTTTACCAAAG+TGG + chr1_4:5235525-5235544 None:intergenic 40.0%
GGTAAACGGAGAGTTACTTA+TGG - chr1_4:5235529-5235548 Msa0145560:intron 40.0%
!! AGAGAGGAACCATGTTTTTG+TGG - chr1_4:5235929-5235948 Msa0145560:intron 40.0%
!! ACCATGTTTTTGTGGCTGTA+AGG - chr1_4:5235937-5235956 Msa0145560:intron 40.0%
TCCTTACAGCCACAAAAACA+TGG + chr1_4:5235941-5235960 None:intergenic 40.0%
GTGGCTGTAAGGAAAAGAAA+AGG - chr1_4:5235948-5235967 Msa0145560:intron 40.0%
TAGATAGTGTTTGCCGAACA+AGG + chr1_4:5236024-5236043 None:intergenic 40.0%
TTAAGCTCAAGAGCCTAAGA+GGG + chr1_4:5236137-5236156 None:intergenic 40.0%
ATTAAGCTCAAGAGCCTAAG+AGG + chr1_4:5236138-5236157 None:intergenic 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_4:5236243-5236262 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_4:5236240-5236259 Msa0145560:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_4:5236256-5236275 None:intergenic 40.0%
TAACTCCACTAGGACCTTTA+AGG + chr1_4:5236257-5236276 None:intergenic 40.0%
TTCTTCCATGTAACTCCACT+AGG + chr1_4:5236267-5236286 None:intergenic 40.0%
ATAAGGCTGACAACTAGAGA+TGG - chr1_4:5236288-5236307 Msa0145560:intron 40.0%
CACCATTGTACTTACAGACA+AGG + chr1_4:5236380-5236399 None:intergenic 40.0%
GTCAATACTGCTTCTAATGC+TGG - chr1_4:5236540-5236559 Msa0145560:intron 40.0%
GATCACCAAAAGCTGCTAAT+TGG - chr1_4:5236661-5236680 Msa0145560:intron 40.0%
TCACCAAAAGCTGCTAATTG+GGG - chr1_4:5236663-5236682 Msa0145560:intron 40.0%
ATAGGGAGAGAAACACACAT+GGG + chr1_4:5237085-5237104 None:intergenic 40.0%
TGGCAAGTTAGCTAGAGATA+GGG + chr1_4:5237102-5237121 None:intergenic 40.0%
TTGGCAAGTTAGCTAGAGAT+AGG + chr1_4:5237103-5237122 None:intergenic 40.0%
TGTGAAGGATGACATAACCA+TGG - chr1_4:5237208-5237227 Msa0145560:intron 40.0%
! GACATAACCATGGTGTTTTG+TGG - chr1_4:5237218-5237237 Msa0145560:intron 40.0%
! ATAACCATGGTGTTTTGTGG+TGG - chr1_4:5237221-5237240 Msa0145560:intron 40.0%
ATATCCACCACAAAACACCA+TGG + chr1_4:5237228-5237247 None:intergenic 40.0%
!!! ATGGTGTTTTGTGGTGGATA+TGG - chr1_4:5237227-5237246 Msa0145560:intron 40.0%
!! CATTTTGGCCTTTCCCTTAA+TGG - chr1_4:5237319-5237338 Msa0145560:intron 40.0%
TCTCTCAGTCAAGTAATCTC+TGG - chr1_4:5237353-5237372 Msa0145560:intron 40.0%
TGAACTGTTCAATTCCTCAG+AGG - chr1_4:5237637-5237656 Msa0145560:intron 40.0%
TCTACCTTCCCACTTCTATT+CGG + chr1_4:5237671-5237690 None:intergenic 40.0%
! GACGACCATTGTATTTTCAG+CGG - chr1_4:5237689-5237708 Msa0145560:intron 40.0%
AAGCTCCGCTGAAAATACAA+TGG + chr1_4:5237697-5237716 None:intergenic 40.0%
! AAAGTCAACAGCACTTGTTG+AGG - chr1_4:5237724-5237743 Msa0145560:intron 40.0%
TGCACAGAACTGAAGACAAT+TGG + chr1_4:5237868-5237887 None:intergenic 40.0%
TTCTTCCTATTCACTGTGCT+TGG - chr1_4:5238049-5238068 Msa0145560:intron 40.0%
TAATGCCAAGCACAGTGAAT+AGG + chr1_4:5238057-5238076 None:intergenic 40.0%
AAAATCGGTGTATCGCTGTT+TGG + chr1_4:5238160-5238179 None:intergenic 40.0%
CATACAAGTCACTCTCTATG+TGG - chr1_4:5238238-5238257 Msa0145560:intron 40.0%
TGTTCGTGGCAATAGCATAA+AGG - chr1_4:5238276-5238295 Msa0145560:intron 40.0%
CTTAACTGATATGGTCACAC+AGG + chr1_4:5238746-5238765 None:intergenic 40.0%
!! CTACAATCGATTGACTTGAC+TGG - chr1_4:5238879-5238898 Msa0145560:intron 40.0%
TCCTAGCATAAGAAACTTGC+CGG - chr1_4:5239273-5239292 Msa0145560:intron 40.0%
GTATATGTCATAGATGCCAC+CGG + chr1_4:5239295-5239314 None:intergenic 40.0%
CGAAAATGACACGATCAAAG+TGG + chr1_4:5239437-5239456 None:intergenic 40.0%
!!! TCTTTTGGCGATGGATTGTA+AGG - chr1_4:5239647-5239666 Msa0145560:intron 40.0%
!!! CTTTTGGCGATGGATTGTAA+GGG - chr1_4:5239648-5239667 Msa0145560:intron 40.0%
!! TGCATTGATTTCGGGTTTGA+AGG - chr1_4:5239778-5239797 Msa0145560:intron 40.0%
!! TTTTAATGGGTGCCAATCCA+AGG - chr1_4:5239919-5239938 Msa0145560:intron 40.0%
AGTATCAACTCTCCTTGGAT+TGG + chr1_4:5239934-5239953 None:intergenic 40.0%
!! ATCCAAGGAGAGTTGATACT+TGG - chr1_4:5239934-5239953 Msa0145560:intron 40.0%
TTCCAAGTATCAACTCTCCT+TGG + chr1_4:5239939-5239958 None:intergenic 40.0%
TGATACTTGGAAGCCTATTG+AGG - chr1_4:5239947-5239966 Msa0145560:intron 40.0%
GATACTTGGAAGCCTATTGA+GGG - chr1_4:5239948-5239967 Msa0145560:intron 40.0%
TGAGTCTATTGAAGAAGTGG+TGG - chr1_4:5240029-5240048 Msa0145560:intron 40.0%
CATTCATAGAACATACAGGG+AGG + chr1_4:5240109-5240128 None:intergenic 40.0%
CTCCCTGTATGTTCTATGAA+TGG - chr1_4:5240107-5240126 Msa0145560:intron 40.0%
TATCGCAGGATACAATCTTG+TGG + chr1_4:5240142-5240161 None:intergenic 40.0%
!! TAGTCCATTGTTTGGTGTTG+TGG - chr1_4:5240160-5240179 Msa0145560:intron 40.0%
!! TGGTGGTGTCATATTAAGAG+TGG - chr1_4:5240263-5240282 Msa0145560:intron 40.0%
!! TAGTTGGGTTAGTGGTAAGT+GGG - chr1_4:5240300-5240319 Msa0145560:intron 40.0%
ATTTACAGGCGAGACCAATA+TGG + chr1_4:5240365-5240384 None:intergenic 40.0%
! TCAGTCTAAGGCCAACATTA+TGG - chr1_4:5240413-5240432 Msa0145560:intron 40.0%
CTAAGGCCAACATTATGGTT+TGG - chr1_4:5240418-5240437 Msa0145560:intron 40.0%
GAAGGGATTCTAACAGCTAA+AGG - chr1_4:5240450-5240469 Msa0145560:intron 40.0%
TTATGCATGAGAGCTTGACT+TGG - chr1_4:5240697-5240716 Msa0145560:intron 40.0%
! TTTGAAGTCTTTGGTTGGCT+TGG - chr1_4:5240757-5240776 Msa0145560:intron 40.0%
ACTGTGTGATCACGAACATT+GGG + chr1_4:5240927-5240946 None:intergenic 40.0%
AACTGTGTGATCACGAACAT+TGG + chr1_4:5240928-5240947 None:intergenic 40.0%
! TGTGCATTATTTCTCTGTCG+AGG - chr1_4:5241084-5241103 Msa0145560:intron 40.0%
CTTGGGAGAAAGAGATTTAC+TGG - chr1_4:5241350-5241369 Msa0145560:intron 40.0%
! TTGTTGTTGAAAATCGGTGG+TGG + chr1_4:5241416-5241435 None:intergenic 40.0%
!! AAGCAAGTTGGTTCATGAAG+GGG + chr1_4:5241640-5241659 None:intergenic 40.0%
!! CAAAGCAAGTTGGTTCATGA+AGG + chr1_4:5241642-5241661 None:intergenic 40.0%
CCCGGTGTGAGAATTTATAT+AGG - chr1_4:5241695-5241714 Msa0145560:intron 40.0%
! AGAATCTGTTGGGGATTTTG+GGG - chr1_4:5241788-5241807 Msa0145560:intron 40.0%
! ACCTCATGCCTTAAGGTTTT+GGG + chr1_4:5241868-5241887 None:intergenic 40.0%
! TACCTCATGCCTTAAGGTTT+TGG + chr1_4:5241869-5241888 None:intergenic 40.0%
ACCTTAAGGCATGAGGTATA+TGG - chr1_4:5241871-5241890 Msa0145560:intron 40.0%
CCTTAAGGCATGAGGTATAT+GGG - chr1_4:5241872-5241891 Msa0145560:intron 40.0%
! TGTTGGGTTTAAAGTGTGAG+TGG + chr1_4:5241946-5241965 None:intergenic 40.0%
! GTCTAAAACAAAAGGCACAG+GGG - chr1_4:5242022-5242041 Msa0145560:intron 40.0%
! TCTAAAACAAAAGGCACAGG+GGG - chr1_4:5242023-5242042 Msa0145560:intron 40.0%
!! GTTGATAGTGAATCAGAGAG+CGG - chr1_4:5242316-5242335 Msa0145560:intron 40.0%
CCAAATTGACCTACGTTTAG+GGG + chr1_4:5242348-5242367 None:intergenic 40.0%
CCCAAATTGACCTACGTTTA+GGG + chr1_4:5242349-5242368 None:intergenic 40.0%
CCCTAAACGTAGGTCAATTT+GGG - chr1_4:5242346-5242365 Msa0145560:intron 40.0%
GAGTGGTTTGAATTCACAAC+AGG - chr1_4:5242518-5242537 Msa0145560:intron 40.0%
GAAAAAGGAGATTGTAGCGT+AGG - chr1_4:5242566-5242585 Msa0145560:intron 40.0%
! GATTGTAGCGTAGGTTTTCT+TGG - chr1_4:5242575-5242594 Msa0145560:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_4:5236256-5236275 None:intergenic 40.0%
CCCCATTGTACTTAAAGACA+AGG + chr1_4:5242959-5242978 None:intergenic 40.0%
TGGAGATAGTTTCTGTGAGA+AGG - chr1_4:5243007-5243026 Msa0145560:three_prime_UTR 40.0%
GAAGTCAGTACTCCTTCTAA+TGG - chr1_4:5243116-5243135 Msa0145560:CDS 40.0%
CAGTTCGCCTGAAAAATCAT+GGG - chr1_4:5243151-5243170 Msa0145560:CDS 40.0%
! TCTTCCTCCCATGATTTTTC+AGG + chr1_4:5243161-5243180 None:intergenic 40.0%
!! GTTGTTTTCACGTGACTGAA+AGG - chr1_4:5243476-5243495 Msa0145560:CDS 40.0%
CTGCGTACAAAACACCAAAA+TGG - chr1_4:5243550-5243569 Msa0145560:CDS 40.0%
CGTACAAAACACCAAAATGG+TGG - chr1_4:5243553-5243572 Msa0145560:CDS 40.0%
AGCGTATCCATTATTCGGAA+AGG + chr1_4:5243796-5243815 None:intergenic 40.0%
GTCTCAGCGTATCCATTATT+CGG + chr1_4:5243801-5243820 None:intergenic 40.0%
!! AAGCACTGTTCATGCTTTTG+TGG - chr1_4:5243870-5243889 Msa0145560:CDS 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_4:5236243-5236262 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_4:5236240-5236259 Msa0145560:intron 40.0%
! TATTTTCCATGCAACACCAC+CGG + chr1_4:5244208-5244227 None:intergenic 40.0%
!! GTGGTGTTGCATGGAAAATA+GGG - chr1_4:5244208-5244227 Msa0145560:CDS 40.0%
GCCATACTCAAACTGAACTA+GGG - chr1_4:5244415-5244434 Msa0145560:intron 40.0%
CCATACTCAAACTGAACTAG+GGG - chr1_4:5244416-5244435 Msa0145560:intron 40.0%
CATACTCAAACTGAACTAGG+GGG - chr1_4:5244417-5244436 Msa0145560:intron 40.0%
GTCAATACTGCTTCTAATGG+TGG - chr1_4:5244477-5244496 Msa0145560:intron 40.0%
! TCTAATGGTGGTGTTGAATG+TGG - chr1_4:5244489-5244508 Msa0145560:intron 40.0%
GTTTCAACAGGTACAGCTAA+TGG + chr1_4:5244555-5244574 None:intergenic 40.0%
TATCAGCTATGAACTGCTCA+GGG + chr1_4:5244620-5244639 None:intergenic 40.0%
! TCTTCTCTTGCTCCTTTTTC+CGG + chr1_4:5244685-5244704 None:intergenic 40.0%
CGACATCAGCTAATTGTTGT+TGG - chr1_4:5244709-5244728 Msa0145560:intron 40.0%
GCTTATAACAAGCAACACTC+AGG - chr1_4:5244750-5244769 Msa0145560:intron 40.0%
!! TTTTGGTTGGTTGTATGGGA+GGG + chr1_4:5244870-5244889 None:intergenic 40.0%
!! GGTCTTTTGGTTGGTTGTAT+GGG + chr1_4:5244874-5244893 None:intergenic 40.0%
!! TGGTCTTTTGGTTGGTTGTA+TGG + chr1_4:5244875-5244894 None:intergenic 40.0%
!! AGACTTCTTGGTCTTTTGGT+TGG + chr1_4:5244883-5244902 None:intergenic 40.0%
TCTGTTAATGAAGTTACGCC+TGG - chr1_4:5244900-5244919 Msa0145560:intron 40.0%
CAAGCAAAAACAGCTACTTC+TGG - chr1_4:5244945-5244964 Msa0145560:intron 40.0%
GCTTGTAACAAGGAAAACTC+AGG - chr1_4:5244990-5245009 Msa0145560:intron 40.0%
GTGAATCAGGTTTCAGTATG+AGG + chr1_4:5245274-5245293 None:intergenic 40.0%
CAGTTCACTACTCCAAGTTT+AGG + chr1_4:5245336-5245355 None:intergenic 40.0%
TTAACCTTCGCAGATGACAT+GGG - chr1_4:5245517-5245536 Msa0145560:intron 40.0%
GCCCAAAATATGGAGAGTTT+AGG - chr1_4:5245561-5245580 Msa0145560:intron 40.0%
GGGGATTTAGTTATATGAGG+TGG - chr1_4:5245644-5245663 Msa0145560:intron 40.0%
!! AGCATTGCTATTTGGGTAGT+AGG - chr1_4:5245746-5245765 Msa0145560:intron 40.0%
!! GCATTGCTATTTGGGTAGTA+GGG - chr1_4:5245747-5245766 Msa0145560:intron 40.0%
!! CATTGCTATTTGGGTAGTAG+GGG - chr1_4:5245748-5245767 Msa0145560:intron 40.0%
GGTAAAAAAGACACGCTGAA+GGG + chr1_4:5245779-5245798 None:intergenic 40.0%
TGGTAAAAAAGACACGCTGA+AGG + chr1_4:5245780-5245799 None:intergenic 40.0%
CACGTTCCATTTGTAATTCC+CGG - chr1_4:5245812-5245831 Msa0145560:intron 40.0%
GACAAACCGGGAATTACAAA+TGG + chr1_4:5245821-5245840 None:intergenic 40.0%
AACAAATTAGTCCTACCTGC+CGG - chr1_4:5245874-5245893 Msa0145560:intron 40.0%
ATTAGTGGAAAGGAATGGCA+AGG - chr1_4:5245897-5245916 Msa0145560:intron 40.0%
!! AAACTGAGAGAGAGAGTACT+AGG - chr1_4:5245931-5245950 Msa0145560:intron 40.0%
AGGAGTTCGCATTCTCTTAT+TGG - chr1_4:5245951-5245970 Msa0145560:intron 40.0%
AGTTCGCATTCTCTTATTGG+AGG - chr1_4:5245954-5245973 Msa0145560:intron 40.0%
CTAGAGGTTCCTGGTTAAAT+TGG + chr1_4:5246061-5246080 None:intergenic 40.0%
!! CTTTTAACTCTAGAGGTTCC+TGG + chr1_4:5246070-5246089 None:intergenic 40.0%
!! CAGGAACCTCTAGAGTTAAA+AGG - chr1_4:5246068-5246087 Msa0145560:intron 40.0%
GTCTGGTTAATGGTTGCTTA+AGG - chr1_4:5246161-5246180 Msa0145560:intron 40.0%
AAGCTCCACTGAGAATATCA+TGG + chr1_4:5246635-5246654 None:intergenic 40.0%
GCTATCTCTTTCTCATCATG+TGG + chr1_4:5246675-5246694 None:intergenic 40.0%
GAGTTACTTAAAGATGAGGG+CGG + chr1_4:5246833-5246852 None:intergenic 40.0%
! TGAGATGTAGAAGCTTGCTT+GGG + chr1_4:5247148-5247167 None:intergenic 40.0%
!! AGTTCTGGGAACAGAATTGA+CGG + chr1_4:5247547-5247566 None:intergenic 40.0%
!! CTTGCATGCAATCTAGTTCT+GGG + chr1_4:5247561-5247580 None:intergenic 40.0%
! ACTTGCATGCAATCTAGTTC+TGG + chr1_4:5247562-5247581 None:intergenic 40.0%
CATGCAAGTCACATTCTATG+CGG - chr1_4:5247573-5247592 Msa0145560:CDS 40.0%
! GGATGGTTGAATTTTGTTCG+TGG - chr1_4:5247597-5247616 Msa0145560:CDS 40.0%
ATTACGTGTTCGCATCAATG+AGG - chr1_4:5247674-5247693 Msa0145560:CDS 40.0%
!!! ACAAGCTAGTTTTCCAACCT+GGG + chr1_4:5247721-5247740 None:intergenic 40.0%
!!! TACAAGCTAGTTTTCCAACC+TGG + chr1_4:5247722-5247741 None:intergenic 40.0%
TAGTATGCTTAGTGCAAGAC+AGG - chr1_4:5247740-5247759 Msa0145560:intron 40.0%
ACCGGATTTCTTTAACTCAG+AGG + chr1_4:5247889-5247908 None:intergenic 40.0%
! CGAAGTATTTGAAGCTCTAC+CGG + chr1_4:5247907-5247926 None:intergenic 40.0%
TCAAATACTTCGAAGAAGGC+AGG - chr1_4:5247915-5247934 Msa0145560:intron 40.0%
CAAATACTTCGAAGAAGGCA+GGG - chr1_4:5247916-5247935 Msa0145560:intron 40.0%
!!! TTATGGGCAGCTTTTGACTT+GGG + chr1_4:5247948-5247967 None:intergenic 40.0%
!! TTTATGGGCAGCTTTTGACT+TGG + chr1_4:5247949-5247968 None:intergenic 40.0%
AAAGCTGCCCATAAAAAGTC+GGG - chr1_4:5247954-5247973 Msa0145560:intron 40.0%
TCATCAACATGGTGTTTCCT+CGG + chr1_4:5248252-5248271 None:intergenic 40.0%
! AGGAAACACCATGTTGATGA+TGG - chr1_4:5248252-5248271 Msa0145560:intron 40.0%
AGCTTAGTCCATCATCAACA+TGG + chr1_4:5248263-5248282 None:intergenic 40.0%
TGTCTGTGGATCATACACTT+TGG - chr1_4:5248392-5248411 Msa0145560:intron 40.0%
TGTGGATCATACACTTTGGT+GGG - chr1_4:5248396-5248415 Msa0145560:intron 40.0%
GTAACTTCTGTATTGCAAGC+AGG + chr1_4:5248544-5248563 None:intergenic 40.0%
! GTTGTTTCCCCTTGAACATA+TGG + chr1_4:5248610-5248629 None:intergenic 40.0%
TGATGCACGTTCGTATATCT+GGG - chr1_4:5248725-5248744 Msa0145560:CDS 40.0%
TTTCTCACAAACGTGAACGT+TGG + chr1_4:5248824-5248843 None:intergenic 40.0%
CGTTGTCTATAACATCCAGT+AGG - chr1_4:5248992-5249011 Msa0145560:CDS 40.0%
TTGTGTCTAAGGGACGAAAA+TGG + chr1_4:5249822-5249841 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + chr1_4:5250016-5250035 None:intergenic 40.0%
AGACGTTAGTCACAAAGCAA+TGG - chr1_4:5250305-5250324 Msa0145560:intron 40.0%
ACCTCCTTGACTCCAATTAA+GGG + chr1_4:5250353-5250372 None:intergenic 40.0%
TACCTCCTTGACTCCAATTA+AGG + chr1_4:5250354-5250373 None:intergenic 40.0%
CTCATGAATAAATGAGGGGA+TGG - chr1_4:5250671-5250690 Msa0145560:intron 40.0%
AGTTACAAAGGCTTAAAGGG+AGG - chr1_4:5250960-5250979 Msa0145560:intron 40.0%
! ACGACACAAACAAAGGTACA+AGG + chr1_4:5251033-5251052 None:intergenic 40.0%
CAAGAGAACGACACAAACAA+AGG + chr1_4:5251040-5251059 None:intergenic 40.0%
CATGGGAGGAAGAGATTTAT+TGG - chr1_4:5251106-5251125 Msa0145560:intron 40.0%
TGCTCAGAAAAAGGGTGAAA+TGG + chr1_4:5232833-5232852 None:intergenic 40.0%
GAGGGACTATATAGTTGGAT+AGG - chr1_4:5251451-5251470 Msa0145560:intron 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_4:5236243-5236262 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_4:5236240-5236259 Msa0145560:intron 40.0%
AACTCCACTAGGACCTTTAA+GGG + chr1_4:5236256-5236275 None:intergenic 40.0%
ATATTCCACACAACTCCACT+AGG + chr1_4:5251997-5252016 None:intergenic 40.0%
AGTGGAGTTGTGTGGAATAT+AGG - chr1_4:5251997-5252016 Msa0145560:intron 40.0%
GTGGAGTTGTGTGGAATATA+GGG - chr1_4:5251998-5252017 Msa0145560:intron 40.0%
CAATGGTGAATCACTCTTTG+AGG - chr1_4:5252119-5252138 Msa0145560:intron 40.0%
CAAGCTCATACTAAACAAGC+GGG - chr1_4:5252207-5252226 Msa0145560:intron 40.0%
ACTAAACAAGCGGGTAACAA+AGG - chr1_4:5252216-5252235 Msa0145560:intron 40.0%
GAAGTCAATACTCCTAATGG+TGG - chr1_4:5252264-5252283 Msa0145560:intron 40.0%
CATTCAACAACACCACCATT+AGG + chr1_4:5252279-5252298 None:intergenic 40.0%
TCAAGACTCCGAAATTTCTC+AGG + chr1_4:5252309-5252328 None:intergenic 40.0%
TTCTATAACAGGCTTCTCAG+GGG + chr1_4:5252409-5252428 None:intergenic 40.0%
CTTCTATAACAGGCTTCTCA+GGG + chr1_4:5252410-5252429 None:intergenic 40.0%
ACTTCTATAACAGGCTTCTC+AGG + chr1_4:5252411-5252430 None:intergenic 40.0%
ACAGGCGTAACTTCTATAAC+AGG + chr1_4:5252420-5252439 None:intergenic 40.0%
ACGCTTAGGACCATTAAAGA+GGG + chr1_4:5252646-5252665 None:intergenic 40.0%
CTTAACCTTAGCAGATGACA+TGG - chr1_4:5252881-5252900 Msa0145560:intron 40.0%
GCTTATTACCTTTGTCACTG+AGG + chr1_4:5252907-5252926 None:intergenic 40.0%
CGCATAAACTCTCCATACTT+TGG + chr1_4:5252930-5252949 None:intergenic 40.0%
AAGTATGGAGAGTTTATGCG+AGG - chr1_4:5252930-5252949 Msa0145560:intron 40.0%
!! GTTGGTGATTCGGTTATATG+AGG - chr1_4:5253014-5253033 Msa0145560:intron 40.0%
!! GTGATTCGGTTATATGAGGT+GGG - chr1_4:5253018-5253037 Msa0145560:intron 40.0%
TGTGTAGAGGATTGCTCTTT+GGG - chr1_4:5253110-5253129 Msa0145560:intron 40.0%
!! GACAAGTATCAGTTTGCTAG+GGG + chr1_4:5237545-5237564 None:intergenic 40.0%
ATCAAAACGTTTCATGTCGG+TGG - chr1_4:5253433-5253452 Msa0145560:intron 40.0%
! TGCTTTATTCCATGCTTACC+AGG + chr1_4:5253636-5253655 None:intergenic 40.0%
TCTTGCACTTCAATGCATGT+TGG - chr1_4:5253772-5253791 Msa0145560:intron 40.0%
ACTTTCCTATTCACTGTGCT+TGG - chr1_4:5254026-5254045 Msa0145560:intron 40.0%
TAATGCCAAGCACAGTGAAT+AGG + chr1_4:5238057-5238076 None:intergenic 40.0%
TGTGCCATAGAAAATTGACG+GGG + chr1_4:5254109-5254128 None:intergenic 40.0%
!! CTTTTTGGCACTTTAGCTGT+GGG + chr1_4:5254202-5254221 None:intergenic 40.0%
!! ACTTTTTGGCACTTTAGCTG+TGG + chr1_4:5254203-5254222 None:intergenic 40.0%
! GCACATAGAGTGTGACTTTT+TGG + chr1_4:5254217-5254236 None:intergenic 40.0%
AAAAGTCACACTCTATGTGC+AGG - chr1_4:5254217-5254236 Msa0145560:intron 40.0%
ATCACTGAGGTTGGAAAAGA+AGG - chr1_4:5254328-5254347 Msa0145560:intron 40.0%
TCACTGAGGTTGGAAAAGAA+GGG - chr1_4:5254329-5254348 Msa0145560:intron 40.0%
GCAGAATGTTAGCAGGTATA+TGG + chr1_4:5254440-5254459 None:intergenic 40.0%
! CATTCAGTAGCCTTGAAGAA+AGG - chr1_4:5254610-5254629 Msa0145560:intron 40.0%
TCAAGTATGGCCTTTCTTCA+AGG + chr1_4:5254623-5254642 None:intergenic 40.0%
TAACGTGTCTTTGTCTTGGT+GGG + chr1_4:5256100-5256119 None:intergenic 40.0%
TTTCATTCTCAAATGGGAGG+TGG - chr1_4:5256175-5256194 Msa0145560:intron 40.0%
ATGGGTGGTACTCAGAAATT+GGG + chr1_4:5256257-5256276 None:intergenic 40.0%
AATGGGTGGTACTCAGAAAT+TGG + chr1_4:5256258-5256277 None:intergenic 40.0%
!! CCTTTAAGGGTCACATTTTC+TGG + chr1_4:5236243-5236262 None:intergenic 40.0%
CCAGAAAATGTGACCCTTAA+AGG - chr1_4:5236240-5236259 Msa0145560:intron 40.0%
CAACTCCACTAAGACCTTTA+AGG + chr1_4:5256662-5256681 None:intergenic 40.0%
GATACTGTTTACTTCACGGA+CGG - chr1_4:5256711-5256730 Msa0145560:intron 40.0%
CAATGGTGAATCACTCTTTG+AGG - chr1_4:5252119-5252138 Msa0145560:intron 40.0%
GACAAGCTCATACTGAACAA+GGG - chr1_4:5256880-5256899 Msa0145560:intron 40.0%
ACAAGCTCATACTGAACAAG+GGG - chr1_4:5256881-5256900 Msa0145560:intron 40.0%
! GTCAATGCTCCTTTTAATGC+TGG - chr1_4:5256942-5256961 Msa0145560:intron 40.0%
! GTTTCAAAAGGTACGGCTAA+TGG + chr1_4:5257020-5257039 None:intergenic 40.0%
ATCAGCCATGCATTTCTTAG+GGG + chr1_4:5257084-5257103 None:intergenic 40.0%
CATCAGCCATGCATTTCTTA+GGG + chr1_4:5257085-5257104 None:intergenic 40.0%
! CTTCTTCTTAGTCCTTTTGC+CGG + chr1_4:5257150-5257169 None:intergenic 40.0%
! CTAGAATTAGCTTCTTTGGG+TGG + chr1_4:5257218-5257237 None:intergenic 40.0%
! CTCGCTAGAATTAGCTTCTT+TGG + chr1_4:5257222-5257241 None:intergenic 40.0%
TGATTTGAGGGCTTGTAACA+AGG - chr1_4:5257250-5257269 Msa0145560:intron 40.0%
GCTTGTAACAAGGAACATTC+TGG - chr1_4:5257260-5257279 Msa0145560:intron 40.0%
TGTGCAGCATAAAAAACCCA+TGG + chr1_4:5257361-5257380 None:intergenic 40.0%
! CATGTCCCCCCTTTTTATAA+TGG - chr1_4:5257422-5257441 Msa0145560:intron 40.0%
TATATGGAGGATGGTAAGCA+TGG - chr1_4:5258021-5258040 Msa0145560:intron 40.0%
ACAGGTGTCTGTATCACTAT+GGG + chr1_4:5258114-5258133 None:intergenic 40.0%
TCGTTCGATACAAACGTTGA+AGG + chr1_4:5258285-5258304 None:intergenic 40.0%
TCAATGGCACATCTTCCAAA+AGG - chr1_4:5258435-5258454 Msa0145560:intron 40.0%
AGGCTGTTGCTATAGCTAAA+AGG - chr1_4:5258508-5258527 Msa0145560:intron 40.0%
ACAAGTCACATTCTATCTGC+AGG - chr1_4:5258540-5258559 Msa0145560:intron 40.0%
ATCTCCAACCTTTATGCCAT+TGG + chr1_4:5258586-5258605 None:intergenic 40.0%
AAGAGTCGCAGAAGACTTTA+TGG - chr1_4:5258812-5258831 Msa0145560:intron 40.0%
! AGTGGCTTGATGGATAAACT+AGG - chr1_4:5259052-5259071 Msa0145560:CDS 40.0%
!! TGGAAGCACCAAATCATTGG+AGG - chr1_4:5232776-5232795 Msa0145560:three_prime_UTR 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_4:5233065-5233084 Msa0145560:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_4:5233066-5233085 Msa0145560:intron 45.0%
TTTGGAGGGGAAGGGAAAAT+AGG - chr1_4:5233079-5233098 Msa0145560:intron 45.0%
TTGGAGGGGAAGGGAAAATA+GGG - chr1_4:5233080-5233099 Msa0145560:intron 45.0%
GTGACACTTAAAGGTCCTAG+CGG - chr1_4:5233679-5233698 Msa0145560:intron 45.0%
CAAGCTCATAGTCCTTCTAG+TGG - chr1_4:5233907-5233926 Msa0145560:intron 45.0%
TATGGGCGGAAGACATTTAC+TGG - chr1_4:5233959-5233978 Msa0145560:intron 45.0%
GGTAAACGGGGAGTTACTTA+TGG + chr1_4:5234279-5234298 None:intergenic 45.0%
TAACTCCCCGTTTACCAAAG+TGG - chr1_4:5234283-5234302 Msa0145560:intron 45.0%
AAGGGACCACTTTGGTAAAC+GGG + chr1_4:5235516-5235535 None:intergenic 45.0%
GAAGGGACCACTTTGGTAAA+CGG + chr1_4:5235515-5235534 None:intergenic 45.0%
! GTTTCAGAGAAAGAGCGTGT+AGG + chr1_4:5234763-5234782 None:intergenic 45.0%
TTTCATCACACAGAGACGGA+CGG + chr1_4:5234894-5234913 None:intergenic 45.0%
GAACAGAAAAGGTGAGGTAG+AGG - chr1_4:5235040-5235059 Msa0145560:intron 45.0%
GAAGGGACCACTTTGGTAAA+CGG - chr1_4:5235515-5235534 Msa0145560:intron 45.0%
AATCCGCAAACATCCCTCTT+AGG - chr1_4:5236121-5236140 Msa0145560:intron 45.0%
AAGGTCCTAGTGGAGTTACA+TGG - chr1_4:5236259-5236278 Msa0145560:intron 45.0%
AGATGGCACTGTTTACTTCG+TGG - chr1_4:5236305-5236324 Msa0145560:intron 45.0%
CAATGGTGAATCCCACTTTG+AGG - chr1_4:5236392-5236411 Msa0145560:intron 45.0%
ACTGAATAGCTGCGGTCTTA+GGG + chr1_4:5236599-5236618 None:intergenic 45.0%
!! TCTCCTCTTGGTTCTTTTGC+CGG + chr1_4:5236637-5236656 None:intergenic 45.0%
TGGTGATCTTCTTCTCCTCT+TGG + chr1_4:5236649-5236668 None:intergenic 45.0%
ACTTGTAACAAGCAACACCC+AGG - chr1_4:5236708-5236727 Msa0145560:intron 45.0%
GATAGGGAGAGAAACACACA+TGG + chr1_4:5237086-5237105 None:intergenic 45.0%
GTGTTGTCAAATATCGGCCA+TGG - chr1_4:5237142-5237161 Msa0145560:intron 45.0%
TTGTCAAATATCGGCCATGG+CGG - chr1_4:5237145-5237164 Msa0145560:intron 45.0%
CCTTCACAAATAGGTCATGC+CGG + chr1_4:5237196-5237215 None:intergenic 45.0%
GGAAAGCCAAAAATCCCCAT+AGG + chr1_4:5237258-5237277 None:intergenic 45.0%
!!! GGATTTTTGGCTTTCCGTCA+CGG - chr1_4:5237262-5237281 Msa0145560:intron 45.0%
!! GTAGTATTATCGATGGCGGA+TGG + chr1_4:5237292-5237311 None:intergenic 45.0%
TCAAATGCAGTGGTGTGCTT+GGG + chr1_4:5237477-5237496 None:intergenic 45.0%
ATCAAATGCAGTGGTGTGCT+TGG + chr1_4:5237478-5237497 None:intergenic 45.0%
CTACCTTCCCACTTCTATTC+GGG + chr1_4:5237670-5237689 None:intergenic 45.0%
ACGAGAACCACTGACATTGA+AGG + chr1_4:5237807-5237826 None:intergenic 45.0%
ATGCGCCGTCGAAAATTGAT+GGG + chr1_4:5238134-5238153 None:intergenic 45.0%
ACAAGTCACTCTCTATGTGG+AGG - chr1_4:5238241-5238260 Msa0145560:intron 45.0%
!! GGATGGATGGATTTTGTTCG+TGG - chr1_4:5238262-5238281 Msa0145560:intron 45.0%
CGTGGCAATAGCATAAAGGT+TGG - chr1_4:5238280-5238299 Msa0145560:intron 45.0%
ATCGCTGAGGTTGGAAAAGA+TGG - chr1_4:5238355-5238374 Msa0145560:intron 45.0%
TCGCTGAGGTTGGAAAAGAT+GGG - chr1_4:5238356-5238375 Msa0145560:intron 45.0%
ATATCACCATGGGTGAAGGT+AGG + chr1_4:5238525-5238544 None:intergenic 45.0%
TCCATCTCTAGATGGGTATG+AGG - chr1_4:5239241-5239260 Msa0145560:intron 45.0%
TCCTCATACCCATCTAGAGA+TGG + chr1_4:5239245-5239264 None:intergenic 45.0%
GGCAAGTTTCTTATGCTAGG+AGG + chr1_4:5239274-5239293 None:intergenic 45.0%
ACCGGCAAGTTTCTTATGCT+AGG + chr1_4:5239277-5239296 None:intergenic 45.0%
TAGCATAAGAAACTTGCCGG+TGG - chr1_4:5239276-5239295 Msa0145560:intron 45.0%
AGAATGGTGGCAGTACAATC+TGG + chr1_4:5239521-5239540 None:intergenic 45.0%
GTCTATTGAAGAAGTGGTGG+AGG - chr1_4:5240032-5240051 Msa0145560:intron 45.0%
TGGTGGAGGAGATAAAAGTG+TGG - chr1_4:5240046-5240065 Msa0145560:intron 45.0%
! AGGAGATAAAAGTGTGGTCG+TGG - chr1_4:5240052-5240071 Msa0145560:intron 45.0%
! AGATAAAAGTGTGGTCGTGG+CGG - chr1_4:5240055-5240074 Msa0145560:intron 45.0%
AGGCATATGGAACCTGTACA+TGG + chr1_4:5240085-5240104 None:intergenic 45.0%
TCCTGCGATAGTCCATTGTT+TGG - chr1_4:5240152-5240171 Msa0145560:intron 45.0%
!! ACCAAACAATGGACTATCGC+AGG + chr1_4:5240156-5240175 None:intergenic 45.0%
CTGTCCACAACACCAAACAA+TGG + chr1_4:5240167-5240186 None:intergenic 45.0%
!! TTGTTTGGTGTTGTGGACAG+TGG - chr1_4:5240167-5240186 Msa0145560:intron 45.0%
!! TGTTTGGTGTTGTGGACAGT+GGG - chr1_4:5240168-5240187 Msa0145560:intron 45.0%
! ACTGTCTGTGGCTCCTATTT+TGG - chr1_4:5240236-5240255 Msa0145560:intron 45.0%
! GGTGTCATATTAAGAGTGGC+AGG - chr1_4:5240267-5240286 Msa0145560:intron 45.0%
TTAAGAGTGGCAGGCAACTA+TGG - chr1_4:5240276-5240295 Msa0145560:intron 45.0%
TAAGAGTGGCAGGCAACTAT+GGG - chr1_4:5240277-5240296 Msa0145560:intron 45.0%
! ACTATGGGTAGTTGGGTTAG+TGG - chr1_4:5240292-5240311 Msa0145560:intron 45.0%
!! GTAGTTGGGTTAGTGGTAAG+TGG - chr1_4:5240299-5240318 Msa0145560:intron 45.0%
! CGGCCGTAATTTGAAGTCTT+TGG - chr1_4:5240748-5240767 Msa0145560:intron 45.0%
GCATCACCGCTAAACAAAAC+AGG + chr1_4:5240890-5240909 None:intergenic 45.0%
ATCTTCCTCGTGAACTGTTG+AGG - chr1_4:5241192-5241211 Msa0145560:intron 45.0%
TTAAGCCTCAACAGTTCACG+AGG + chr1_4:5241200-5241219 None:intergenic 45.0%
! GACGAGAAGAGAAAAGGTAC+AGG + chr1_4:5241225-5241244 None:intergenic 45.0%
! GTTCTGGACGAGAAGAGAAA+AGG + chr1_4:5241231-5241250 None:intergenic 45.0%
GAGAAAGTTGCAAGCTGTTC+TGG + chr1_4:5241247-5241266 None:intergenic 45.0%
GAACAGCTTGCAACTTTCTC+TGG - chr1_4:5241247-5241266 Msa0145560:intron 45.0%
ACTGTCTTGCGTTCGAAGAT+GGG - chr1_4:5241304-5241323 Msa0145560:intron 45.0%
AGGTGGAAGCAGCAAATCTT+GGG - chr1_4:5241333-5241352 Msa0145560:intron 45.0%
! CGGTGGTGGTTTGAAGAAAT+TGG + chr1_4:5241402-5241421 None:intergenic 45.0%
TGGGACAATGCAAAGCAAGT+TGG + chr1_4:5241652-5241671 None:intergenic 45.0%
TGACTTCCAAGTTCCAACGT+GGG + chr1_4:5241671-5241690 None:intergenic 45.0%
ATGACTTCCAAGTTCCAACG+TGG + chr1_4:5241672-5241691 None:intergenic 45.0%
GAACTTGGAAGTCATGAACC+CGG - chr1_4:5241677-5241696 Msa0145560:intron 45.0%
! GAATCTGTTGGGGATTTTGG+GGG - chr1_4:5241789-5241808 Msa0145560:intron 45.0%
! AATCTGTTGGGGATTTTGGG+GGG - chr1_4:5241790-5241809 Msa0145560:intron 45.0%
AGATATTCCATGACCACGAG+AGG - chr1_4:5241834-5241853 Msa0145560:intron 45.0%
TGACACCACCCAAAACCTTA+AGG - chr1_4:5241857-5241876 Msa0145560:intron 45.0%
!!! TCATGCCTTAAGGTTTTGGG+TGG + chr1_4:5241865-5241884 None:intergenic 45.0%
ACCCAAAACCTTAAGGCATG+AGG - chr1_4:5241864-5241883 Msa0145560:intron 45.0%
CCCATATACCTCATGCCTTA+AGG + chr1_4:5241875-5241894 None:intergenic 45.0%
! CTAAAACAAAAGGCACAGGG+GGG - chr1_4:5242024-5242043 Msa0145560:intron 45.0%
! TAAAACAAAAGGCACAGGGG+GGG - chr1_4:5242025-5242044 Msa0145560:intron 45.0%
CCCCTAAACGTAGGTCAATT+TGG - chr1_4:5242345-5242364 Msa0145560:intron 45.0%
GCCCAAATTGACCTACGTTT+AGG + chr1_4:5242350-5242369 None:intergenic 45.0%
! CCTTTAAGGGTCACATTGTC+TGG + chr1_4:5242825-5242844 None:intergenic 45.0%
CCAGACAATGTGACCCTTAA+AGG - chr1_4:5242822-5242841 Msa0145560:intron 45.0%
CAACTCCACTAGGACCTTTA+AGG + chr1_4:5242839-5242858 None:intergenic 45.0%
ACATTCCACACAACTCCACT+AGG + chr1_4:5242849-5242868 None:intergenic 45.0%
AGTGGAGTTGTGTGGAATGT+CGG - chr1_4:5242849-5242868 Msa0145560:intron 45.0%
GACAAGCTCATACCGAACAA+GGG - chr1_4:5243057-5243076 Msa0145560:CDS 45.0%
! TACCGAACAAGGGTGTAACA+AGG - chr1_4:5243067-5243086 Msa0145560:CDS 45.0%
! ACCGAACAAGGGTGTAACAA+GGG - chr1_4:5243068-5243087 Msa0145560:CDS 45.0%
TCCCTTGTTACACCCTTGTT+CGG + chr1_4:5243072-5243091 None:intergenic 45.0%
GTCAGTACTCCTTCTAATGG+CGG - chr1_4:5243119-5243138 Msa0145560:CDS 45.0%
CATTCAACACCGCCATTAGA+AGG + chr1_4:5243131-5243150 None:intergenic 45.0%
GCAGTTCGCCTGAAAAATCA+TGG - chr1_4:5243150-5243169 Msa0145560:CDS 45.0%
TTCGCCTGAAAAATCATGGG+AGG - chr1_4:5243154-5243173 Msa0145560:CDS 45.0%
CATGGGAGGAAGACATTTAC+TGG - chr1_4:5243168-5243187 Msa0145560:CDS 45.0%
TGGGAAGAAGTTGGGTGAAA+TGG + chr1_4:5243211-5243230 None:intergenic 45.0%
GAGTGGTGTGAAAGAGGAAA+AGG + chr1_4:5243263-5243282 None:intergenic 45.0%
AGGAAAGAGTGGTGTGAAAG+AGG + chr1_4:5243269-5243288 None:intergenic 45.0%
TCACGTGACTGAAAGGTCAT+AGG - chr1_4:5243483-5243502 Msa0145560:CDS 45.0%
AAGGTCATAGGTTCAAGTCG+TGG - chr1_4:5243495-5243514 Msa0145560:CDS 45.0%
AGGTCATAGGTTCAAGTCGT+GGG - chr1_4:5243496-5243515 Msa0145560:CDS 45.0%
ATGCAGGACCTTTAGTGATC+CGG - chr1_4:5243598-5243617 Msa0145560:intron 45.0%
GAATTGTAAAAAGGGCAGCC+CGG + chr1_4:5243620-5243639 None:intergenic 45.0%
AATGTGACCCTTAAAGGTCC+CGG - chr1_4:5236246-5236265 Msa0145560:intron 45.0%
! ATTTTCCATGCAACACCACC+GGG + chr1_4:5244207-5244226 None:intergenic 45.0%
!! GGTGGTGTTGCATGGAAAAT+AGG - chr1_4:5244207-5244226 Msa0145560:CDS 45.0%
AGACGATACCGTTTACTTCG+TGG - chr1_4:5244242-5244261 Msa0145560:CDS 45.0%
GATACCGTTTACTTCGTGGA+CGG - chr1_4:5244246-5244265 Msa0145560:CDS 45.0%
GGCCATACTCAAACTGAACT+AGG - chr1_4:5244414-5244433 Msa0145560:intron 45.0%
CCCCTAGTTCAGTTTGAGTA+TGG + chr1_4:5244419-5244438 None:intergenic 45.0%
ATCAGCTATGAACTGCTCAG+GGG + chr1_4:5244619-5244638 None:intergenic 45.0%
GTATCAGCTATGAACTGCTC+AGG + chr1_4:5244621-5244640 None:intergenic 45.0%
GTAGGGAAACTGTATAGCTG+TGG + chr1_4:5244655-5244674 None:intergenic 45.0%
!! CTTTTTCCGGTTGGTTGGTA+GGG + chr1_4:5244672-5244691 None:intergenic 45.0%
!! TTGTTGGAGAGCACTTGACT+GGG - chr1_4:5244725-5244744 Msa0145560:intron 45.0%
!! CTTTTGGTTGGTTGTATGGG+AGG + chr1_4:5244871-5244890 None:intergenic 45.0%
TTAATGAAGTTACGCCTGGC+CGG - chr1_4:5244904-5244923 Msa0145560:intron 45.0%
TGGCGAGAGAGCAATTGATT+GGG - chr1_4:5244965-5244984 Msa0145560:intron 45.0%
! TGATTGGGTGGCTTGTAACA+AGG - chr1_4:5244980-5244999 Msa0145560:intron 45.0%
CATGTCATCTGCGAAGGTTA+AGG + chr1_4:5245518-5245537 None:intergenic 45.0%
CTTAACCTTCGCAGATGACA+TGG - chr1_4:5245516-5245535 Msa0145560:intron 45.0%
GCTTATTCCCTTTGTCACTC+AGG + chr1_4:5245543-5245562 None:intergenic 45.0%
!! TGGAGAGATAGAGGGTATCA+TGG - chr1_4:5245673-5245692 Msa0145560:intron 45.0%
GCCATTCCTTTCCACTAATC+CGG + chr1_4:5245896-5245915 None:intergenic 45.0%
TGGAAAGGAATGGCAAGGTT+CGG - chr1_4:5245902-5245921 Msa0145560:intron 45.0%
AAGAAACTTGTCTCTGCGTG+TGG - chr1_4:5246006-5246025 Msa0145560:intron 45.0%
AGAAACTTGTCTCTGCGTGT+GGG - chr1_4:5246007-5246026 Msa0145560:intron 45.0%
AGGAGAGATCAGTAGTGAGA+TGG - chr1_4:5246088-5246107 Msa0145560:intron 45.0%
GGAGAGATCAGTAGTGAGAT+GGG - chr1_4:5246089-5246108 Msa0145560:intron 45.0%
GAGAGATCAGTAGTGAGATG+GGG - chr1_4:5246090-5246109 Msa0145560:intron 45.0%
! CAGACTTTATCCCGCTGTTT+TGG + chr1_4:5246146-5246165 None:intergenic 45.0%
CAAAACAGCGGGATAAAGTC+TGG - chr1_4:5246144-5246163 Msa0145560:intron 45.0%
GCGGGATAAAGTCTGGTTAA+TGG - chr1_4:5246151-5246170 Msa0145560:intron 45.0%
GGTTGCTTAAGGGTTTCCTT+TGG - chr1_4:5246172-5246191 Msa0145560:intron 45.0%
ACAGCATCACTACGAGACTT+CGG + chr1_4:5246200-5246219 None:intergenic 45.0%
AACTGTTCAATTCCTCGCAG+AGG - chr1_4:5246575-5246594 Msa0145560:intron 45.0%
CAGCCATCCTGAATAGAAGT+GGG - chr1_4:5246598-5246617 Msa0145560:intron 45.0%
CTTCCCACTTCTATTCAGGA+TGG + chr1_4:5246604-5246623 None:intergenic 45.0%
CATCCTGAATAGAAGTGGGA+AGG - chr1_4:5246602-5246621 Msa0145560:intron 45.0%
AATAGAAGTGGGAAGGCAGA+TGG - chr1_4:5246609-5246628 Msa0145560:intron 45.0%
GATGGCCATGATATTCTCAG+TGG - chr1_4:5246627-5246646 Msa0145560:intron 45.0%
TGTTGAACGTCCACGTATTC+TGG - chr1_4:5246749-5246768 Msa0145560:intron 45.0%
GAACAACTCACCAGAATACG+TGG + chr1_4:5246762-5246781 None:intergenic 45.0%
TGTATGGAGGATGGTAAGCA+TGG - chr1_4:5246931-5246950 Msa0145560:CDS 45.0%
! GTGAGATGTAGAAGCTTGCT+TGG + chr1_4:5247149-5247168 None:intergenic 45.0%
CGTGGCAATAGCCTAAAGAT+TGG - chr1_4:5247615-5247634 Msa0145560:CDS 45.0%
!! AAAAGATGGGTTAGACTCCC+AGG - chr1_4:5247701-5247720 Msa0145560:intron 45.0%
AATCAGCTCAAAGTGCAGTG+CGG - chr1_4:5247809-5247828 Msa0145560:intron 45.0%
!!! TATGGGCAGCTTTTGACTTG+GGG + chr1_4:5247947-5247966 None:intergenic 45.0%
TGCCCATAAAAAGTCGGGTA+TGG - chr1_4:5247959-5247978 Msa0145560:intron 45.0%
TCCTCTATTTGCCCAGTAGA+TGG - chr1_4:5247986-5248005 Msa0145560:intron 45.0%
ACCATCTACTGGGCAAATAG+AGG + chr1_4:5247990-5248009 None:intergenic 45.0%
AAACAAAGACAGCTGTACCG+AGG - chr1_4:5248232-5248251 Msa0145560:intron 45.0%
CTGTGGATCATACACTTTGG+TGG - chr1_4:5248395-5248414 Msa0145560:intron 45.0%
GTTACGCTTCGCAATTCAAG+AGG - chr1_4:5248559-5248578 Msa0145560:intron 45.0%
GCAATTCAAGAGGCAAACGT+TGG - chr1_4:5248569-5248588 Msa0145560:intron 45.0%
AACTCCGTCCCATATGTTCA+AGG - chr1_4:5248598-5248617 Msa0145560:CDS 45.0%
ACTCCGTCCCATATGTTCAA+GGG - chr1_4:5248599-5248618 Msa0145560:CDS 45.0%
TTCCCCTTGAACATATGGGA+CGG + chr1_4:5248605-5248624 None:intergenic 45.0%
!! TTCACACTTTTTGTGGCGGA+TGG - chr1_4:5248632-5248651 Msa0145560:CDS 45.0%
GTGATGCACGTTCGTATATC+TGG - chr1_4:5248724-5248743 Msa0145560:CDS 45.0%
GATGCACGTTCGTATATCTG+GGG - chr1_4:5248726-5248745 Msa0145560:CDS 45.0%
! TCGTATATCTGGGGTTGGAA+AGG - chr1_4:5248735-5248754 Msa0145560:CDS 45.0%
! ATATCTGGGGTTGGAAAGGA+AGG - chr1_4:5248739-5248758 Msa0145560:CDS 45.0%
TCAACATTTCGCAAGCCTAC+TGG + chr1_4:5249010-5249029 None:intergenic 45.0%
!! CACTCATGGAGGCTTTGAAA+CGG + chr1_4:5249731-5249750 None:intergenic 45.0%
! ACATTTTCTCGATGGCAGCA+AGG + chr1_4:5249786-5249805 None:intergenic 45.0%
TCTAAGGGACGAAAATGGCA+TGG + chr1_4:5249817-5249836 None:intergenic 45.0%
! CCAAACTGGCTCAGATATTC+CGG - chr1_4:5250199-5250218 Msa0145560:intron 45.0%
! CAAACTGGCTCAGATATTCC+GGG - chr1_4:5250200-5250219 Msa0145560:intron 45.0%
ACTTAGCAGTGATCACGAGT+AGG - chr1_4:5250238-5250257 Msa0145560:intron 45.0%
ACCCTTAATTGGAGTCAAGG+AGG - chr1_4:5250349-5250368 Msa0145560:intron 45.0%
GAGTCAAGGAGGTAGAATTC+TGG - chr1_4:5250360-5250379 Msa0145560:intron 45.0%
! TCCTCGAGTGTAGTGCTATT+TGG - chr1_4:5250427-5250446 Msa0145560:CDS 45.0%
TCCAAATAGCACTACACTCG+AGG + chr1_4:5250431-5250450 None:intergenic 45.0%
!! GCGTTTTAACACTCGACTAG+AGG - chr1_4:5250531-5250550 Msa0145560:intron 45.0%
! TTCCTCGTGAAGTGCTATCA+AGG - chr1_4:5250997-5251016 Msa0145560:intron 45.0%
ATCGGTGGTGCTCAGAAAAA+GGG + chr1_4:5251157-5251176 None:intergenic 45.0%
AATCGGTGGTGCTCAGAAAA+AGG + chr1_4:5251158-5251177 None:intergenic 45.0%
TGAGGGAGGGACTATATAGT+TGG - chr1_4:5251446-5251465 Msa0145560:intron 45.0%
AAGTGATAGTATAGGCCCTC+TGG - chr1_4:5251532-5251551 Msa0145560:intron 45.0%
GAAAAAGGAGATTGTAGCGC+AGG - chr1_4:5251707-5251726 Msa0145560:intron 45.0%
! GATTGTAGCGCAGGTTTTCA+TGG - chr1_4:5251716-5251735 Msa0145560:intron 45.0%
GGCGCTTCCTAAAACATTCT+CGG - chr1_4:5251927-5251946 Msa0145560:intron 45.0%
CAACTCCACTAGGACCTTTA+AGG + chr1_4:5242839-5242858 None:intergenic 45.0%
AGGTGACACTGTTTACTTCG+TGG - chr1_4:5252032-5252051 Msa0145560:intron 45.0%
GACACTGTTTACTTCGTGGA+TGG - chr1_4:5252036-5252055 Msa0145560:intron 45.0%
CTGTTTACTTCGTGGATGGT+TGG - chr1_4:5252040-5252059 Msa0145560:intron 45.0%
GTGCTTCGCCTGAGAAATTT+CGG - chr1_4:5252298-5252317 Msa0145560:intron 45.0%
! GCTTGCTTATTAGTCTGGAC+AGG + chr1_4:5252438-5252457 None:intergenic 45.0%
GCTTAGGACCATTAAAGAGG+GGG + chr1_4:5252644-5252663 None:intergenic 45.0%
CGCTTAGGACCATTAAAGAG+GGG + chr1_4:5252645-5252664 None:intergenic 45.0%
CACGCTTAGGACCATTAAAG+AGG + chr1_4:5252647-5252666 None:intergenic 45.0%
CTCTTTAATGGTCCTAAGCG+TGG - chr1_4:5252645-5252664 Msa0145560:intron 45.0%
GAGAGAATGATGAGATGGCA+AGG - chr1_4:5252966-5252985 Msa0145560:intron 45.0%
AGAATGATGAGATGGCAAGG+AGG - chr1_4:5252969-5252988 Msa0145560:intron 45.0%
GAATGATGAGATGGCAAGGA+GGG - chr1_4:5252970-5252989 Msa0145560:intron 45.0%
!! GGTGATTCGGTTATATGAGG+TGG - chr1_4:5253017-5253036 Msa0145560:intron 45.0%
GTTATATGAGGTGGGAGTTG+TGG - chr1_4:5253026-5253045 Msa0145560:intron 45.0%
CTGTGTAGAGGATTGCTCTT+TGG - chr1_4:5253109-5253128 Msa0145560:intron 45.0%
AGGATTGCTCTTTGGGTAGT+AGG - chr1_4:5253117-5253136 Msa0145560:intron 45.0%
GGATTGCTCTTTGGGTAGTA+GGG - chr1_4:5253118-5253137 Msa0145560:intron 45.0%
TGTCGGTGGTTCATGTGTTA+TGG - chr1_4:5253447-5253466 Msa0145560:intron 45.0%
GCTTGAGAAACTGATCTGGT+TGG - chr1_4:5253555-5253574 Msa0145560:intron 45.0%
TATGTATGGAGGATGGAACC+TGG - chr1_4:5253615-5253634 Msa0145560:intron 45.0%
ATTACGTGTTCGCATCACTG+AGG - chr1_4:5254315-5254334 Msa0145560:intron 45.0%
CTCACAAGCAGAATGTTAGC+AGG + chr1_4:5254447-5254466 None:intergenic 45.0%
CAGTGTCAAGAACTCTGCAT+TGG + chr1_4:5254823-5254842 None:intergenic 45.0%
GTAACGTGTCTTTGTCTTGG+TGG + chr1_4:5256101-5256120 None:intergenic 45.0%
CATGGGAGGAAGAGATTTAC+TGG - chr1_4:5256206-5256225 Msa0145560:intron 45.0%
GTGACCCTTAAAGGTCTTAG+TGG - chr1_4:5256654-5256673 Msa0145560:intron 45.0%
AAGGTCTTAGTGGAGTTGTG+TGG - chr1_4:5256664-5256683 Msa0145560:intron 45.0%
AGGTCTTAGTGGAGTTGTGT+GGG - chr1_4:5256665-5256684 Msa0145560:intron 45.0%
AGTGGAGTTGTGTGGGATAT+TGG - chr1_4:5256672-5256691 Msa0145560:intron 45.0%
GTGGAGTTGTGTGGGATATT+GGG - chr1_4:5256673-5256692 Msa0145560:intron 45.0%
GGACAAGCTCATACTGAACA+AGG - chr1_4:5256879-5256898 Msa0145560:intron 45.0%
CAAGCTCATACTGAACAAGG+GGG - chr1_4:5256882-5256901 Msa0145560:intron 45.0%
ACTGAACAAGGGGGTAACAA+AGG - chr1_4:5256891-5256910 Msa0145560:intron 45.0%
TGCTTCCCCTAAGAAATGCA+TGG - chr1_4:5257076-5257095 Msa0145560:intron 45.0%
GCATCAGCCATGCATTTCTT+AGG + chr1_4:5257086-5257105 None:intergenic 45.0%
! TTCTTAGTCCTTTTGCCGGT+TGG + chr1_4:5257146-5257165 None:intergenic 45.0%
!! CTTCTTAGTCTTGACAGCCA+CGG + chr1_4:5257186-5257205 None:intergenic 45.0%
!! CGAGAGAGCACTTGATTTGA+GGG - chr1_4:5257238-5257257 Msa0145560:intron 45.0%
TGTCGGTGGTTCATGTATTC+TGG - chr1_4:5257841-5257860 Msa0145560:CDS 45.0%
GCTTGAGAAACTGATCTGCT+CGG - chr1_4:5257960-5257979 Msa0145560:CDS 45.0%
GACAGGTGTCTGTATCACTA+TGG + chr1_4:5258115-5258134 None:intergenic 45.0%
CGACATGCATTGAAGTGCAA+GGG + chr1_4:5258179-5258198 None:intergenic 45.0%
CCTTGCACTTCAATGCATGT+CGG - chr1_4:5258177-5258196 Msa0145560:CDS 45.0%
GTCACATTCTATCTGCAGGA+TGG - chr1_4:5258544-5258563 Msa0145560:intron 45.0%
CATTCTATCTGCAGGATGGT+TGG - chr1_4:5258548-5258567 Msa0145560:intron 45.0%
!! TTGGCTTTTGTTCGTGCCAA+TGG - chr1_4:5258567-5258586 Msa0145560:intron 45.0%
TGTTCGTGCCAATGGCATAA+AGG - chr1_4:5258575-5258594 Msa0145560:intron 45.0%
! AGTGCTGAGGTTGGAAAAGA+TGG - chr1_4:5258651-5258670 Msa0145560:intron 45.0%
GTGCTGAGGTTGGAAAAGAT+GGG - chr1_4:5258652-5258671 Msa0145560:intron 45.0%
AACGTTAGCAGGTAGAAGGA+TGG + chr1_4:5258759-5258778 None:intergenic 45.0%
ACAGAACGTTAGCAGGTAGA+AGG + chr1_4:5258763-5258782 None:intergenic 45.0%
!!! ATTATTTTTTATTTTTTTTG+AGG - chr1_4:5232983-5233002 Msa0145560:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+AGG - chr1_4:5233224-5233243 Msa0145560:intron 5.0%
!!! TTAATTATTTTAACAAAATA+TGG + chr1_4:5237782-5237801 None:intergenic 5.0%
!!! TTTTTTTTTTAATAATAAGA+GGG + chr1_4:5239705-5239724 None:intergenic 5.0%
!!! ATTTTTTTTTTAATAATAAG+AGG + chr1_4:5239706-5239725 None:intergenic 5.0%
!! TATTAAAAAAAAAATTGTTA+CGG - chr1_4:5239711-5239730 Msa0145560:intron 5.0%
!! AAGATAAAAAAAAAATTAAA+AGG + chr1_4:5243411-5243430 None:intergenic 5.0%
!!! ATTAATAATATTGATTTTAA+TGG - chr1_4:5250858-5250877 Msa0145560:intron 5.0%
!! TTTATTATATTAACAAAATA+TGG + chr1_4:5257812-5257831 None:intergenic 5.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_4:5233064-5233083 Msa0145560:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_4:5233071-5233090 Msa0145560:intron 50.0%
AAGGTCCTAGCGGAATTGTG+TGG - chr1_4:5233689-5233708 Msa0145560:intron 50.0%
GAACGGTTGGCAACAATTCG+TGG - chr1_4:5233753-5233772 Msa0145560:intron 50.0%
GCTCATAGTCCTTCTAGTGG+TGG - chr1_4:5233910-5233929 Msa0145560:intron 50.0%
AGGGACCACTTTGGTAAACG+GGG + chr1_4:5235517-5235536 None:intergenic 50.0%
ACTAACGGAAGGGACCACTT+TGG + chr1_4:5235508-5235527 None:intergenic 50.0%
AGAAGGAGAGTTAGAGGCAG+CGG + chr1_4:5234831-5234850 None:intergenic 50.0%
CCTCTAACTCTCCTTCTCGT+CGG - chr1_4:5234834-5234853 Msa0145560:intron 50.0%
AAAAGGTGAGGTAGAGGCAG+TGG - chr1_4:5235046-5235065 Msa0145560:intron 50.0%
AGAAGGAGAGGGAGATGCAA+CGG - chr1_4:5235169-5235188 Msa0145560:intron 50.0%
TGCGTTGCTGGAGAAGATGA+AGG - chr1_4:5235352-5235371 Msa0145560:intron 50.0%
ACTAACGGAAGGGACCACTT+TGG - chr1_4:5235508-5235527 Msa0145560:intron 50.0%
GAGCCTAAGAGGGATGTTTG+CGG + chr1_4:5236127-5236146 None:intergenic 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_4:5236249-5236268 Msa0145560:intron 50.0%
GGCACTGTTTACTTCGTGGA+CGG - chr1_4:5236309-5236328 Msa0145560:intron 50.0%
CTGTTTACTTCGTGGACGGT+TGG - chr1_4:5236313-5236332 Msa0145560:intron 50.0%
GCCATGCTCAAACAGCACAA+GGG - chr1_4:5236478-5236497 Msa0145560:intron 50.0%
CCATGCTCAAACAGCACAAG+GGG - chr1_4:5236479-5236498 Msa0145560:intron 50.0%
CATGCTCAAACAGCACAAGG+GGG - chr1_4:5236480-5236499 Msa0145560:intron 50.0%
TGATTCCCCTGAGCAGTTCA+CGG - chr1_4:5236563-5236582 Msa0145560:intron 50.0%
ATCATCCGTGAACTGCTCAG+GGG + chr1_4:5236571-5236590 None:intergenic 50.0%
CATCATCCGTGAACTGCTCA+GGG + chr1_4:5236572-5236591 None:intergenic 50.0%
CACTGAATAGCTGCGGTCTT+AGG + chr1_4:5236600-5236619 None:intergenic 50.0%
GAAGGGACACTGAATAGCTG+CGG + chr1_4:5236607-5236626 None:intergenic 50.0%
!!! CTTTTGCCGGTTGGTAGGAA+GGG + chr1_4:5236624-5236643 None:intergenic 50.0%
!!! TCTTTTGCCGGTTGGTAGGA+AGG + chr1_4:5236625-5236644 None:intergenic 50.0%
!! TGGTTCTTTTGCCGGTTGGT+AGG + chr1_4:5236629-5236648 None:intergenic 50.0%
!! CTCTTGGTTCTTTTGCCGGT+TGG + chr1_4:5236633-5236652 None:intergenic 50.0%
CAACCGGCAAAAGAACCAAG+AGG - chr1_4:5236631-5236650 Msa0145560:intron 50.0%
! GCACCCCAATTAGCAGCTTT+TGG + chr1_4:5236669-5236688 None:intergenic 50.0%
GAGAAACACACATGGGAGAG+AGG + chr1_4:5237078-5237097 None:intergenic 50.0%
CCGGCATGACCTATTTGTGA+AGG - chr1_4:5237193-5237212 Msa0145560:intron 50.0%
TGCGCCGTCGAAAATTGATG+GGG + chr1_4:5238133-5238152 None:intergenic 50.0%
GATGCGCCGTCGAAAATTGA+TGG + chr1_4:5238135-5238154 None:intergenic 50.0%
GTCACTCTCTATGTGGAGGA+TGG - chr1_4:5238245-5238264 Msa0145560:intron 50.0%
CTCTCTATGTGGAGGATGGA+TGG - chr1_4:5238249-5238268 Msa0145560:intron 50.0%
AAAGGACCTACCTTCACCCA+TGG - chr1_4:5238516-5238535 Msa0145560:intron 50.0%
AGGCTACGAAATGGTCATGC+AGG + chr1_4:5238726-5238745 None:intergenic 50.0%
TGGTCACACAGGCTACGAAA+TGG + chr1_4:5238735-5238754 None:intergenic 50.0%
! CCATCGCCAAAAGAGCATGA+AGG + chr1_4:5239641-5239660 None:intergenic 50.0%
! CCTTCATGCTCTTTTGGCGA+TGG - chr1_4:5239638-5239657 Msa0145560:intron 50.0%
CATAGAACATACAGGGAGGG+AGG + chr1_4:5240105-5240124 None:intergenic 50.0%
!! GTTTGGTGTTGTGGACAGTG+GGG - chr1_4:5240169-5240188 Msa0145560:intron 50.0%
GGTTCACCTTGTGTTCCTTG+TGG - chr1_4:5240193-5240212 Msa0145560:intron 50.0%
CACCTTGTGTTCCTTGTGGT+TGG - chr1_4:5240197-5240216 Msa0145560:intron 50.0%
GACCAACCACAAGGAACACA+AGG + chr1_4:5240202-5240221 None:intergenic 50.0%
!! GTCTGTGGCTCCTATTTTGG+AGG - chr1_4:5240239-5240258 Msa0145560:intron 50.0%
ACACCACCAGCCTCCAAAAT+AGG + chr1_4:5240252-5240271 None:intergenic 50.0%
GCAGGCAACTATGGGTAGTT+GGG - chr1_4:5240285-5240304 Msa0145560:intron 50.0%
TTAGTGGTAAGTGGGTGAGG+AGG - chr1_4:5240308-5240327 Msa0145560:intron 50.0%
CACTGTCTTGCGTTCGAAGA+TGG - chr1_4:5241303-5241322 Msa0145560:intron 50.0%
CAGGTGGAAGCAGCAAATCT+TGG - chr1_4:5241332-5241351 Msa0145560:intron 50.0%
TGCTTTGCATTGTCCCACGT+TGG - chr1_4:5241655-5241674 Msa0145560:intron 50.0%
CATTGTCCCACGTTGGAACT+TGG - chr1_4:5241662-5241681 Msa0145560:intron 50.0%
! AAAACAAAAGGCACAGGGGG+GGG - chr1_4:5242026-5242045 Msa0145560:intron 50.0%
GGGAGAGTGAAATCTTGCTC+TGG - chr1_4:5242046-5242065 Msa0145560:intron 50.0%
ATGAAGTGAGGGGTTCAGAG+AGG - chr1_4:5242129-5242148 Msa0145560:intron 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_4:5236249-5236268 Msa0145560:intron 50.0%
AAGGTCCTAGTGGAGTTGTG+TGG - chr1_4:5242841-5242860 Msa0145560:intron 50.0%
GTGGAGTTGTGTGGAATGTC+GGG - chr1_4:5242850-5242869 Msa0145560:intron 50.0%
GGACAAGCTCATACCGAACA+AGG - chr1_4:5243056-5243075 Msa0145560:CDS 50.0%
CAAGGCTCCCCCTTAGTTAA+AGG + chr1_4:5243443-5243462 None:intergenic 50.0%
CTTTAACTAAGGGGGAGCCT+TGG - chr1_4:5243441-5243460 Msa0145560:CDS 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr1_4:5243461-5243480 None:intergenic 50.0%
CTAAAGGTCCTGCATACGCA+GGG + chr1_4:5243593-5243612 None:intergenic 50.0%
ACTAAAGGTCCTGCATACGC+AGG + chr1_4:5243594-5243613 None:intergenic 50.0%
TGCAGGACCTTTAGTGATCC+GGG - chr1_4:5243599-5243618 Msa0145560:intron 50.0%
AACACCACCGGGACCTTTAA+GGG + chr1_4:5244196-5244215 None:intergenic 50.0%
CCAACCGTCCACGAAGTAAA+CGG + chr1_4:5236316-5236335 None:intergenic 50.0%
ACTAGGGGGTAGCAAAGCAA+AGG - chr1_4:5244431-5244450 Msa0145560:intron 50.0%
CAGTTTCCCTACCAACCAAC+CGG - chr1_4:5244663-5244682 Msa0145560:intron 50.0%
!! CCTTTTTCCGGTTGGTTGGT+AGG + chr1_4:5244673-5244692 None:intergenic 50.0%
CCTACCAACCAACCGGAAAA+AGG - chr1_4:5244670-5244689 Msa0145560:intron 50.0%
! TGCTCCTTTTTCCGGTTGGT+TGG + chr1_4:5244677-5244696 None:intergenic 50.0%
! CTCTTGCTCCTTTTTCCGGT+TGG + chr1_4:5244681-5244700 None:intergenic 50.0%
!! GTTGTTGGAGAGCACTTGAC+TGG - chr1_4:5244724-5244743 Msa0145560:intron 50.0%
CTGGCGAGAGAGCAATTGAT+TGG - chr1_4:5244964-5244983 Msa0145560:intron 50.0%
CGAGAGAGCAATTGATTGGG+TGG - chr1_4:5244968-5244987 Msa0145560:intron 50.0%
ACATGGGCCTGAGTGACAAA+GGG - chr1_4:5245533-5245552 Msa0145560:intron 50.0%
AGAGAGAATGAGAGGTGGCA+AGG - chr1_4:5245601-5245620 Msa0145560:intron 50.0%
GTTATATGAGGTGGGAGCTG+TGG - chr1_4:5245653-5245672 Msa0145560:intron 50.0%
TTTCCACTAATCCGGCAGGT+AGG + chr1_4:5245888-5245907 None:intergenic 50.0%
!! TACCTGCCGGATTAGTGGAA+AGG - chr1_4:5245887-5245906 Msa0145560:intron 50.0%
TTCCTTTCCACTAATCCGGC+AGG + chr1_4:5245892-5245911 None:intergenic 50.0%
!! GCCGGATTAGTGGAAAGGAA+TGG - chr1_4:5245892-5245911 Msa0145560:intron 50.0%
TGGAAACACATGGTCTGCTG+AGG + chr1_4:5246041-5246060 None:intergenic 50.0%
CAGTAGTGAGATGGGGCATA+TGG - chr1_4:5246097-5246116 Msa0145560:intron 50.0%
TGCTAGGAGGACCAAAACAG+CGG - chr1_4:5246132-5246151 Msa0145560:intron 50.0%
CTACGAGACTTCGGAACCAA+AGG + chr1_4:5246191-5246210 None:intergenic 50.0%
CATGGGTAATCAAGCGGAGA+TGG - chr1_4:5246229-5246248 Msa0145560:intron 50.0%
GCAGCCATCCTGAATAGAAG+TGG - chr1_4:5246597-5246616 Msa0145560:intron 50.0%
CTGCCTTCCCACTTCTATTC+AGG + chr1_4:5246608-5246627 None:intergenic 50.0%
TACCTAGCGAAGATGGTGCT+TGG - chr1_4:5247104-5247123 Msa0145560:CDS 50.0%
TTCATCCCATTCCCTGTGCT+TGG - chr1_4:5247385-5247404 Msa0145560:CDS 50.0%
GAATGCCAAGCACAGGGAAT+GGG + chr1_4:5247393-5247412 None:intergenic 50.0%
TGAATGCCAAGCACAGGGAA+TGG + chr1_4:5247394-5247413 None:intergenic 50.0%
CAGTGTGAATGCCAAGCACA+GGG + chr1_4:5247399-5247418 None:intergenic 50.0%
TCAGTGTGAATGCCAAGCAC+AGG + chr1_4:5247400-5247419 None:intergenic 50.0%
GCAAGTCACATTCTATGCGG+AGG - chr1_4:5247576-5247595 Msa0145560:CDS 50.0%
GTCACATTCTATGCGGAGGA+TGG - chr1_4:5247580-5247599 Msa0145560:CDS 50.0%
CGTGTTCGCATCAATGAGGT+TGG - chr1_4:5247678-5247697 Msa0145560:intron 50.0%
!!! ATGGGCAGCTTTTGACTTGG+GGG + chr1_4:5247946-5247965 None:intergenic 50.0%
!! TGATGATGGACTAAGCTCCC+AGG - chr1_4:5248266-5248285 Msa0145560:intron 50.0%
GTGCAGTAGAGAACTGGCAT+GGG + chr1_4:5248516-5248535 None:intergenic 50.0%
TGTGCAGTAGAGAACTGGCA+TGG + chr1_4:5248517-5248536 None:intergenic 50.0%
GGAGATGTGCAGTAGAGAAC+TGG + chr1_4:5248522-5248541 None:intergenic 50.0%
CTCCGTCCCATATGTTCAAG+GGG - chr1_4:5248600-5248619 Msa0145560:CDS 50.0%
! CACGTTCGTATATCTGGGGT+TGG - chr1_4:5248730-5248749 Msa0145560:CDS 50.0%
GTGAACGTTGGCAGGTAGAT+GGG + chr1_4:5248812-5248831 None:intergenic 50.0%
TCACAAACGTGAACGTTGGC+AGG + chr1_4:5248820-5248839 None:intergenic 50.0%
CGTTTCAAAGCCTCCATGAG+TGG - chr1_4:5249729-5249748 Msa0145560:intron 50.0%
TGGATGCGGCTTGTGTCTAA+GGG + chr1_4:5249832-5249851 None:intergenic 50.0%
ATGGATGCGGCTTGTGTCTA+AGG + chr1_4:5249833-5249852 None:intergenic 50.0%
GCACTTCAACATTCCTGCCT+GGG - chr1_4:5249890-5249909 Msa0145560:intron 50.0%
CACTTCAACATTCCTGCCTG+GGG - chr1_4:5249891-5249910 Msa0145560:intron 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr1_4:5250012-5250031 None:intergenic 50.0%
CCGGAATATCTGAGCCAGTT+TGG + chr1_4:5250202-5250221 None:intergenic 50.0%
! TGCCTTGATAGCACTTCACG+AGG + chr1_4:5251002-5251021 None:intergenic 50.0%
! TCGTGAAGTGCTATCAAGGC+AGG - chr1_4:5251001-5251020 Msa0145560:intron 50.0%
GGTGGGCAATTTAGTCCAGA+GGG + chr1_4:5251550-5251569 None:intergenic 50.0%
AGGTGGGCAATTTAGTCCAG+AGG + chr1_4:5251551-5251570 None:intergenic 50.0%
GTGACCCTTAAAGGTCCTAG+TGG - chr1_4:5236249-5236268 Msa0145560:intron 50.0%
AAGGTCCTAGTGGAGTTGTG+TGG - chr1_4:5242841-5242860 Msa0145560:intron 50.0%
TGAGGCCATGTCATCTGCTA+AGG + chr1_4:5252889-5252908 None:intergenic 50.0%
TGACATGGCCTCAGTGACAA+AGG - chr1_4:5252896-5252915 Msa0145560:intron 50.0%
!! TGGAGAGATGGAGGGTATCA+TGG - chr1_4:5253046-5253065 Msa0145560:intron 50.0%
AGGATGGAACCTGGTAAGCA+TGG - chr1_4:5253624-5253643 Msa0145560:intron 50.0%
GTCACACTCTATGTGCAGGA+TGG - chr1_4:5254221-5254240 Msa0145560:intron 50.0%
AAAAGAAGGGCTAGACTGCC+AGG - chr1_4:5254342-5254361 Msa0145560:intron 50.0%
CAAGACCTTCCTTTCCAACC+TGG + chr1_4:5248747-5248766 None:intergenic 50.0%
! AGAAGGCGCGTCTTCAAGTA+TGG + chr1_4:5254636-5254655 None:intergenic 50.0%
TGCAGAGTTCTTGACACTGC+TGG - chr1_4:5254824-5254843 Msa0145560:intron 50.0%
GCAGAGTTCTTGACACTGCT+GGG - chr1_4:5254825-5254844 Msa0145560:intron 50.0%
TGGGAGGTGGAAGAAGATCA+TGG - chr1_4:5256188-5256207 Msa0145560:intron 50.0%
GGGAGGTGGAAGAAGATCAT+GGG - chr1_4:5256189-5256208 Msa0145560:intron 50.0%
AGGTGGAAGAAGATCATGGG+AGG - chr1_4:5256192-5256211 Msa0145560:intron 50.0%
CTGTTTACTTCACGGACGGT+TGG - chr1_4:5256715-5256734 Msa0145560:intron 50.0%
GAAGCCTGTTAAAGAAGCCG+TGG - chr1_4:5257166-5257185 Msa0145560:intron 50.0%
ACAGCCACGGCTTCTTTAAC+AGG + chr1_4:5257173-5257192 None:intergenic 50.0%
GCTGTCAAGACTAAGAAGCG+AGG - chr1_4:5257188-5257207 Msa0145560:intron 50.0%
!! GCGAGAGAGCACTTGATTTG+AGG - chr1_4:5257237-5257256 Msa0145560:intron 50.0%
CCGACATGCATTGAAGTGCA+AGG + chr1_4:5258180-5258199 None:intergenic 50.0%
GGGAGAACGTTGGACTGTTA+AGG - chr1_4:5258488-5258507 Msa0145560:intron 50.0%
CGTGCCAATGGCATAAAGGT+TGG - chr1_4:5258579-5258598 Msa0145560:intron 50.0%
!! AAAAGATGGGCTAGACTGCC+AGG - chr1_4:5258665-5258684 Msa0145560:intron 50.0%
CAAGACCTTCCTTTCCAACC+TGG + chr1_4:5248747-5248766 None:intergenic 50.0%
CTCACGAACAGAACGTTAGC+AGG + chr1_4:5258770-5258789 None:intergenic 50.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_4:5233070-5233089 Msa0145560:intron 55.0%
CCGACGAGAAGGAGAGTTAG+AGG + chr1_4:5234837-5234856 None:intergenic 55.0%
ATCACACAGAGACGGACGGA+CGG + chr1_4:5234890-5234909 None:intergenic 55.0%
GGATCTGGATCATGCGTTGC+TGG - chr1_4:5235340-5235359 Msa0145560:intron 55.0%
GGCCATGCTCAAACAGCACA+AGG - chr1_4:5236477-5236496 Msa0145560:intron 55.0%
!! CCCCTTGTGCTGTTTGAGCA+TGG + chr1_4:5236482-5236501 None:intergenic 55.0%
GCATCATCCGTGAACTGCTC+AGG + chr1_4:5236573-5236592 None:intergenic 55.0%
CAGTGTCCCTTCCTACCAAC+CGG - chr1_4:5236615-5236634 Msa0145560:intron 55.0%
!! ATATCGGCCATGGCGGATTG+TGG - chr1_4:5237152-5237171 Msa0145560:intron 55.0%
CAGCCAGCCCGAATAGAAGT+GGG - chr1_4:5237660-5237679 Msa0145560:intron 55.0%
CTTCCCACTTCTATTCGGGC+TGG + chr1_4:5237666-5237685 None:intergenic 55.0%
CAGCCCGAATAGAAGTGGGA+AGG - chr1_4:5237664-5237683 Msa0145560:intron 55.0%
TCGTGTTCGCATCATCGCTG+AGG - chr1_4:5238342-5238361 Msa0145560:intron 55.0%
GTTCGCATCATCGCTGAGGT+TGG - chr1_4:5238346-5238365 Msa0145560:intron 55.0%
! TAAAAGTGTGGTCGTGGCGG+TGG - chr1_4:5240058-5240077 Msa0145560:intron 55.0%
! CATACAGGGAGGGAGGCATA+TGG + chr1_4:5240098-5240117 None:intergenic 55.0%
!! CCTTGTGGTTGGTCTGTGTG+CGG - chr1_4:5240208-5240227 Msa0145560:intron 55.0%
!! CTTGTGGTTGGTCTGTGTGC+GGG - chr1_4:5240209-5240228 Msa0145560:intron 55.0%
! TGTGCGGGTTGTACTGTCTG+TGG - chr1_4:5240224-5240243 Msa0145560:intron 55.0%
!! GTGGCTCCTATTTTGGAGGC+TGG - chr1_4:5240243-5240262 Msa0145560:intron 55.0%
!! GCTCCTATTTTGGAGGCTGG+TGG - chr1_4:5240246-5240265 Msa0145560:intron 55.0%
GGCAGGCAACTATGGGTAGT+TGG - chr1_4:5240284-5240303 Msa0145560:intron 55.0%
! GGGTTAGTGGTAAGTGGGTG+AGG - chr1_4:5240305-5240324 Msa0145560:intron 55.0%
TGAGGAGGTCGTTGTTGGCA+TGG - chr1_4:5240323-5240342 Msa0145560:intron 55.0%
GAGGAGGTCGTTGTTGGCAT+GGG - chr1_4:5240324-5240343 Msa0145560:intron 55.0%
GTCTTGCGTTCGAAGATGGG+AGG - chr1_4:5241307-5241326 Msa0145560:intron 55.0%
!! GTTGGGGATTTTGGGGGGTA+CGG - chr1_4:5241795-5241814 Msa0145560:intron 55.0%
!! TTGGGGATTTTGGGGGGTAC+GGG - chr1_4:5241796-5241815 Msa0145560:intron 55.0%
TGGAAGTCTGTTCATGCGCG+AGG - chr1_4:5242066-5242085 Msa0145560:intron 55.0%
CAACACCACCGGGACCTTTA+AGG + chr1_4:5244197-5244216 None:intergenic 55.0%
CCGTTTACTTCGTGGACGGT+TGG - chr1_4:5244250-5244269 Msa0145560:CDS 55.0%
!! TTGGAGAGCACTTGACTGGG+TGG - chr1_4:5244728-5244747 Msa0145560:intron 55.0%
GTCTTCCCCGCTTCTTACTC+CGG + chr1_4:5244926-5244945 None:intergenic 55.0%
GACATGGGCCTGAGTGACAA+AGG - chr1_4:5245532-5245551 Msa0145560:intron 55.0%
TGGGAGCTGTGGAGAGATAG+AGG - chr1_4:5245664-5245683 Msa0145560:intron 55.0%
GGGAGCTGTGGAGAGATAGA+GGG - chr1_4:5245665-5245684 Msa0145560:intron 55.0%
! AGTCCTACCTGCCGGATTAG+TGG - chr1_4:5245882-5245901 Msa0145560:intron 55.0%
GTCTCTGCGTGTGGGTAGAT+TGG - chr1_4:5246015-5246034 Msa0145560:intron 55.0%
! ATGGCCTTGCAGAGCTTGCT+AGG - chr1_4:5246116-5246135 Msa0145560:intron 55.0%
TCCTCCTAGCAAGCTCTGCA+AGG + chr1_4:5246123-5246142 None:intergenic 55.0%
GCTAGGAGGACCAAAACAGC+GGG - chr1_4:5246133-5246152 Msa0145560:intron 55.0%
TGCCAAGCACCATCTTCGCT+AGG + chr1_4:5247109-5247128 None:intergenic 55.0%
!! GATGGGTTAGACTCCCAGGT+TGG - chr1_4:5247705-5247724 Msa0145560:intron 55.0%
CGTGAACGTTGGCAGGTAGA+TGG + chr1_4:5248813-5248832 None:intergenic 55.0%
CGCACTTCAACATTCCTGCC+TGG - chr1_4:5249889-5249908 Msa0145560:intron 55.0%
GAACTCCACGTTGAAACCCC+AGG + chr1_4:5249910-5249929 None:intergenic 55.0%
TCTAAGTACTCCCTCCGTCC+CGG - chr1_4:5249995-5250014 Msa0145560:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr1_4:5250008-5250027 None:intergenic 55.0%
CTGGCTCAGATATTCCGGGA+CGG - chr1_4:5250204-5250223 Msa0145560:intron 55.0%
CTCAGATATTCCGGGACGGA+GGG - chr1_4:5250208-5250227 Msa0145560:intron 55.0%
AGGTGGGAGTTGTGGAGAGA+TGG - chr1_4:5253034-5253053 Msa0145560:intron 55.0%
TGGGAGTTGTGGAGAGATGG+AGG - chr1_4:5253037-5253056 Msa0145560:intron 55.0%
GGGAGTTGTGGAGAGATGGA+GGG - chr1_4:5253038-5253057 Msa0145560:intron 55.0%
TTGACAGTGCTGCCTCTGTG+TGG + chr1_4:5253342-5253361 None:intergenic 55.0%
CGTGTTCGCATCACTGAGGT+TGG - chr1_4:5254319-5254338 Msa0145560:intron 55.0%
! GCTAGACTGCCAGGTTGGAA+AGG - chr1_4:5254351-5254370 Msa0145560:intron 55.0%
! GACTGCCAGGTTGGAAAGGA+AGG - chr1_4:5254355-5254374 Msa0145560:intron 55.0%
!! TCTGCATTGGTTGAAGCCGC+GGG + chr1_4:5254810-5254829 None:intergenic 55.0%
!! CTCTGCATTGGTTGAAGCCG+CGG + chr1_4:5254811-5254830 None:intergenic 55.0%
CAGTTTCCCTTCCAGCCAAC+CGG - chr1_4:5257128-5257147 Msa0145560:intron 55.0%
!! CTTTTGCCGGTTGGCTGGAA+GGG + chr1_4:5257137-5257156 None:intergenic 55.0%
!! TAGTCCTTTTGCCGGTTGGC+TGG + chr1_4:5257142-5257161 None:intergenic 55.0%
TGACACAGGCGAGTCGTATC+TGG - chr1_4:5257472-5257491 Msa0145560:intron 55.0%
TTGACAGTGCTGCCTCTGTG+TGG + chr1_4:5253342-5253361 None:intergenic 55.0%
GTTACGTGTTCGCAGTGCTG+AGG - chr1_4:5258638-5258657 Msa0145560:intron 55.0%
! GCTAGACTGCCAGGTTGGAA+AGG - chr1_4:5254351-5254370 Msa0145560:intron 55.0%
! GACTGCCAGGTTGGAAAGGA+AGG - chr1_4:5254355-5254374 Msa0145560:intron 55.0%
GCGAGAAGGATAGGGACGGA+CGG + chr1_4:5234862-5234881 None:intergenic 60.0%
TCCGTCCCTATCCTTCTCGC+CGG - chr1_4:5234862-5234881 Msa0145560:intron 60.0%
AATGGACGATGCCGGCGAGA+AGG - chr1_4:5235152-5235171 Msa0145560:intron 60.0%
CATCTCCCTCTCCTTCTCGC+CGG + chr1_4:5235166-5235185 None:intergenic 60.0%
! GGGTGCGAGAGCACATGCTT+GGG - chr1_4:5236683-5236702 Msa0145560:intron 60.0%
TCCACCACCACAATCCGCCA+TGG + chr1_4:5237162-5237181 None:intergenic 60.0%
GCAGCCAGCCCGAATAGAAG+TGG - chr1_4:5237659-5237678 Msa0145560:intron 60.0%
!! TGGTGTTGTGGACAGTGGGG+CGG - chr1_4:5240172-5240191 Msa0145560:intron 60.0%
CCGCACACAGACCAACCACA+AGG + chr1_4:5240211-5240230 None:intergenic 60.0%
GTGGGTGAGGAGGTCGTTGT+TGG - chr1_4:5240318-5240337 Msa0145560:intron 60.0%
CGTTCGAAGATGGGAGGAGC+AGG - chr1_4:5241313-5241332 Msa0145560:intron 60.0%
TCGAAGATGGGAGGAGCAGG+TGG - chr1_4:5241316-5241335 Msa0145560:intron 60.0%
! GGGGGGTACGGGAGAAACAA+CGG - chr1_4:5241807-5241826 Msa0145560:intron 60.0%
! GGGGGTACGGGAGAAACAAC+GGG - chr1_4:5241808-5241827 Msa0145560:intron 60.0%
! GGTGTCACCTCTCGTGGTCA+TGG + chr1_4:5241844-5241863 None:intergenic 60.0%
!! TTGGGTGGTGTCACCTCTCG+TGG + chr1_4:5241850-5241869 None:intergenic 60.0%
CGGCTCTCTCCCCTAAACGT+AGG - chr1_4:5242336-5242355 Msa0145560:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr1_4:5243567-5243586 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG + chr1_4:5243581-5243600 None:intergenic 60.0%
GCATACGCAGGGTCTGGGAA+GGG + chr1_4:5243582-5243601 None:intergenic 60.0%
TGCATACGCAGGGTCTGGGA+AGG + chr1_4:5243583-5243602 None:intergenic 60.0%
TTCCCAGACCCTGCGTATGC+AGG - chr1_4:5243582-5243601 Msa0145560:intron 60.0%
GTCCTGCATACGCAGGGTCT+GGG + chr1_4:5243587-5243606 None:intergenic 60.0%
AGGGCAGCCCGGATCACTAA+AGG + chr1_4:5243609-5243628 None:intergenic 60.0%
GTGACCCTTAAAGGTCCCGG+TGG - chr1_4:5244189-5244208 Msa0145560:CDS 60.0%
!! AAGGTCCCGGTGGTGTTGCA+TGG - chr1_4:5244199-5244218 Msa0145560:CDS 60.0%
CAGGCCCATGTCATCTGCGA+AGG + chr1_4:5245524-5245543 None:intergenic 60.0%
!! GCCTTGCAGAGCTTGCTAGG+AGG - chr1_4:5246119-5246138 Msa0145560:intron 60.0%
CTCCATGAGTGGCCGTGCTT+CGG - chr1_4:5249740-5249759 Msa0145560:intron 60.0%
CAACGACTGACGCCGAAGCA+CGG + chr1_4:5249755-5249774 None:intergenic 60.0%
GCTTCGGCGTCAGTCGTTGT+AGG - chr1_4:5249756-5249775 Msa0145560:intron 60.0%
TCCTGCCTGGGGTTTCAACG+TGG - chr1_4:5249902-5249921 Msa0145560:intron 60.0%
TCCACGTTGAAACCCCAGGC+AGG + chr1_4:5249906-5249925 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr1_4:5250009-5250028 None:intergenic 60.0%
GCTCAGATATTCCGGGACGG+AGG - chr1_4:5250207-5250226 Msa0145560:intron 60.0%
AGTGTGTACTCCCTCCGTCC+CGG + chr1_4:5250221-5250240 None:intergenic 60.0%
GAAGGGCTAGACTGCCAGGT+TGG - chr1_4:5254346-5254365 Msa0145560:intron 60.0%
AATATACTCCCTCCGGCCCG+CGG - chr1_4:5254791-5254810 Msa0145560:intron 60.0%
!! CCTTTTGCCGGTTGGCTGGA+AGG + chr1_4:5257138-5257157 None:intergenic 60.0%
CCTTCCAGCCAACCGGCAAA+AGG - chr1_4:5257135-5257154 Msa0145560:intron 60.0%
! CGTGTTCGCAGTGCTGAGGT+TGG - chr1_4:5258642-5258661 Msa0145560:intron 60.0%
!! GATGGGCTAGACTGCCAGGT+TGG - chr1_4:5258669-5258688 Msa0145560:intron 60.0%
GCCGGCGAGAAGGATAGGGA+CGG + chr1_4:5234866-5234885 None:intergenic 65.0%
ACGATGCCGGCGAGAAGGAG+AGG - chr1_4:5235157-5235176 Msa0145560:intron 65.0%
CGATGCCGGCGAGAAGGAGA+GGG - chr1_4:5235158-5235177 Msa0145560:intron 65.0%
! GGGGTGCGAGAGCACATGCT+TGG - chr1_4:5236682-5236701 Msa0145560:intron 65.0%
!! TCGGCCATGGCGGATTGTGG+TGG - chr1_4:5237155-5237174 Msa0145560:intron 65.0%
!! GCCATGGCGGATTGTGGTGG+TGG - chr1_4:5237158-5237177 Msa0145560:intron 65.0%
! TGGCGGATGGCAGACCGTGA+CGG + chr1_4:5237279-5237298 None:intergenic 65.0%
!! ATTCGGGCTGGCTGCCTCTG+AGG + chr1_4:5237654-5237673 None:intergenic 65.0%
CGTGGCGGTGGACCATGTAC+AGG - chr1_4:5240070-5240089 Msa0145560:intron 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG - chr1_4:5243449-5243468 Msa0145560:CDS 65.0%
GGTCCTGCATACGCAGGGTC+TGG + chr1_4:5243588-5243607 None:intergenic 65.0%
CGCCTGGCCGGAGTAAGAAG+CGG - chr1_4:5244916-5244935 Msa0145560:intron 65.0%
GCCTGGCCGGAGTAAGAAGC+GGG - chr1_4:5244917-5244936 Msa0145560:intron 65.0%
CCTGGCCGGAGTAAGAAGCG+GGG - chr1_4:5244918-5244937 Msa0145560:intron 65.0%
TCAGGATGGCTGCCTCTGCG+AGG + chr1_4:5246590-5246609 None:intergenic 65.0%
CGAAGCACGGCCACTCATGG+AGG + chr1_4:5249742-5249761 None:intergenic 65.0%
! CATTGGTTGAAGCCGCGGGC+CGG + chr1_4:5254806-5254825 None:intergenic 65.0%
!! CGGCGCCGGCGAGAAGGATA+GGG + chr1_4:5234870-5234889 None:intergenic 70.0%
!! ACGGCGCCGGCGAGAAGGAT+AGG + chr1_4:5234871-5234890 None:intergenic 70.0%
CCCCGCTTCTTACTCCGGCC+AGG + chr1_4:5244921-5244940 None:intergenic 70.0%
CGCCGAAGCACGGCCACTCA+TGG + chr1_4:5249745-5249764 None:intergenic 70.0%
!! GACGGACGGCGCCGACGAGA+AGG + chr1_4:5234848-5234867 None:intergenic 75.0%
CAGAGACGGACGGACGGCGC+CGG + chr1_4:5234884-5234903 None:intergenic 75.0%
GGTTGAAGCCGCGGGCCGGA+GGG + chr1_4:5254802-5254821 None:intergenic 75.0%
TGGTTGAAGCCGCGGGCCGG+AGG + chr1_4:5254803-5254822 None:intergenic 75.0%
!!! GACGGACGGCGCCGGCGAGA+AGG + chr1_4:5234876-5234895 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 5232753 5259078 5232753 ID=Msa0145560;Name=Msa0145560
chr1_4 mRNA 5232753 5259078 5232753 ID=Msa0145560-mRNA-1;Parent=Msa0145560;Name=Msa0145560-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.43|0.23|1|0.5|0.29|17|368|984
chr1_4 exon 5232753 5232965 5232753 ID=Msa0145560-mRNA-1:exon:2178;Parent=Msa0145560-mRNA-1
chr1_4 exon 5242875 5243323 5242875 ID=Msa0145560-mRNA-1:exon:2177;Parent=Msa0145560-mRNA-1
chr1_4 exon 5243418 5243591 5243418 ID=Msa0145560-mRNA-1:exon:2176;Parent=Msa0145560-mRNA-1
chr1_4 exon 5243851 5244069 5243851 ID=Msa0145560-mRNA-1:exon:2175;Parent=Msa0145560-mRNA-1
chr1_4 exon 5244109 5244348 5244109 ID=Msa0145560-mRNA-1:exon:2174;Parent=Msa0145560-mRNA-1
chr1_4 exon 5245061 5245236 5245061 ID=Msa0145560-mRNA-1:exon:2173;Parent=Msa0145560-mRNA-1
chr1_4 exon 5246820 5246978 5246820 ID=Msa0145560-mRNA-1:exon:2172;Parent=Msa0145560-mRNA-1
chr1_4 exon 5247060 5247284 5247060 ID=Msa0145560-mRNA-1:exon:2171;Parent=Msa0145560-mRNA-1
chr1_4 exon 5247321 5247461 5247321 ID=Msa0145560-mRNA-1:exon:2170;Parent=Msa0145560-mRNA-1
chr1_4 exon 5247498 5247693 5247498 ID=Msa0145560-mRNA-1:exon:2169;Parent=Msa0145560-mRNA-1
chr1_4 exon 5248581 5248802 5248581 ID=Msa0145560-mRNA-1:exon:2168;Parent=Msa0145560-mRNA-1
chr1_4 exon 5248839 5249051 5248839 ID=Msa0145560-mRNA-1:exon:2167;Parent=Msa0145560-mRNA-1
chr1_4 exon 5250393 5250509 5250393 ID=Msa0145560-mRNA-1:exon:2166;Parent=Msa0145560-mRNA-1
chr1_4 exon 5255583 5255633 5255583 ID=Msa0145560-mRNA-1:exon:2165;Parent=Msa0145560-mRNA-1
chr1_4 exon 5257790 5258014 5257790 ID=Msa0145560-mRNA-1:exon:2164;Parent=Msa0145560-mRNA-1
chr1_4 exon 5258024 5258203 5258024 ID=Msa0145560-mRNA-1:exon:2163;Parent=Msa0145560-mRNA-1
chr1_4 exon 5258956 5259078 5258956 ID=Msa0145560-mRNA-1:exon:2162;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5258956 5259078 5258956 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5258024 5258203 5258024 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5257790 5258014 5257790 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5255583 5255633 5255583 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5250393 5250509 5250393 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5248839 5249051 5248839 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5248581 5248802 5248581 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5247498 5247693 5247498 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5247321 5247461 5247321 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5247060 5247284 5247060 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5246820 5246978 5246820 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5245061 5245236 5245061 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5244109 5244348 5244109 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5243851 5244069 5243851 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5243418 5243591 5243418 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 CDS 5243030 5243323 5243030 ID=Msa0145560-mRNA-1:cds;Parent=Msa0145560-mRNA-1
chr1_4 three_prime_UTR 5242875 5243029 5242875 ID=Msa0145560-mRNA-1:three_prime_utr;Parent=Msa0145560-mRNA-1
chr1_4 three_prime_UTR 5232753 5232965 5232753 ID=Msa0145560-mRNA-1:three_prime_utr;Parent=Msa0145560-mRNA-1
Gene Sequence

>Msa0145560

ATGGAAGGAACTCAAAACTGTGTTGGAAGCACCAAATCATTGGAGGAAATCATTTATTGGACCCATTTTCAGTTCATCCATTTCACCCTTTTTCTGAGCATCACCCATTTTCACCATCAACTTGCACTTCCGAAAACATTTTCAGACAATTTAAAGAAGAAATTGCCAGCAAATGTGACACTTAAAGGTCCTAGCGGAATTGTGTGGAATATAGGGCTTACAACTAGAGGTGATACTATTTACTTCACGAACGGTTGGCAACAATTCGTGGAAGACCACTCCTTGAAGCAGAATGATTTCCTTTACAATGGTGAATCACACTTTGAGGTTTTAATCTTTAATGGAAATACTTTCTGTGAGAAGGCAGCGTCATATTTTGTTCAAAAATGTGGACAAGCTCATAGTCCTTCTAGTGGTGGTGTTGAATACAGTTCACCTGAAAAATTATGGGCGGAAGACATTTACTGGAGCTATTTCAAATTCACACATTTCACCCTATTGCTTCACACCAATTTTGAACGACAACTTGCACTTCCTAAAACATTTTCAGACAATTTAAATAAGAAGTTGCCAGAAAATATGGGAGGAGCAGGTGGAAGCAGCAAATCTTGGGAGAAAGAGATTTACTGGACCCATTTTCAGTTCATTCATTTCATCCAATTTCTTCAAACCACCACCGATTTTCAACAACAACTTGCCCTTCCCAAAACATTTTCAGACAATTTAAAGAAGAAGTTGCCAGACAATGTGACCCTTAAAGGTCCTAGTGGAGTTGTGTGGAATGTCGGGCTGACAGCTAGAGATGATACCATTTACTTCACAAATGGATGGCAAAGATTCGTGAAAGATCACTCTTTGAAAGAGAATGATTTCCTTGTCTTTAAGTACAATGGGGAATCACTCTTTGAAGCAGCTTCTTATTTTGTTGGAAAATGTGGACAAGCTCATACCGAACAAGGGTGTAACAAGGGAAAAAGCTCCAATAATTCTGTTGAAGAAGTCAGTACTCCTTCTAATGGCGGTGTTGAATGCAGTTCGCCTGAAAAATCATGGGAGGAAGACATTTACTGGACCCATTTTCAGTTCATCCATTTCACCCAACTTCTTCCCAAAGATTTTAAGCAACAACTTGCACTTCCTAAAACATTTTCAGACAATTTAAATAAGAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCCGGTGGTGTTGCATGGAAAATAGGGCTCATAACTAGAGACGATACCGTTTACTTCGTGGACGGTTGGCAACGATTCGTGAACGATCACTCTTTGAAAGATAATGATTTCCTTGTCTTTAATTACAATGAAAGCTTCTGTGAGAAAGAAGCTTCTTATTTTGTCGGAAAATGCGGCCATACTCAAACTGAACTAGGGGGTAGCAAAGCAAAGGAAACAAACAATTCTATTGAAGAAGTCAATACTGCTTCTAATGGTGGTGTTGAATGTGGAACACCATTAGCTGTACCTGTTGAAACTACCAATGAAAAGACTTTTAATGCTGGTGTCAAATCTGATTCCCCTGAGCAGTTCATAGCTGATACAGTCACTAAGACCACAGCTATACAGTTTCCCTACCAACCAACCGGAAAAAGGAGCAAGAGAAGATCATCGACATCAGCTAATTGTTGTTGGAGAGCACTTGACTGGGTGGCTTATAACAAGCAACACTCAGTCACTATAGCGGTTCCCTCCCATACAACCAACCAAAAGACCAAGAAGTCTGTTAATGAAGTTACGCCTGGCCGGAGTAAGAAGCGGGGAAGACAAGCAAAAACAGCTACTTCTGGCGAGAGAGCAATTGATTGGGTGGCTTGTAACAAGGAAAACTCAGAGGCAGCCATCCTGAATAGAAGTGGGAAGGCAGATGGCCATGATATTCTCAGTGGAGCTTCACTGTCTAAGTTATCACCACATGATGAGAAAGAGATAGCCCAATCATTTACCTCCTCTTTTCCATATTTTGTTAAAATAATGAAAACGTTCAATGTTGAACGTCCACGTATTCTGGATCATCTTCCAAACTGCAAGATAAAGATTATTCTTCATAATTTGAAGGGAGAACAGTGGACCGTCAATTCTGTTCCCAGAACTAGATTGCATGCAAGTCACATTCTATGCGGAGGATGGTTGAATTTTGTTCGTGGCAATAGCCTAAAGATTGGAGATGTCTGTATTTTCGAACTTATAGGTGAGTGTGAATTACGTGTTCGCATCAATGAGGTTGGAAAAGATGGGTTAGACTCCCAGGAAGTCGCTAGCCATAAGACTTCCAGATTTATGCCGAAGAAACATAAAATCAGCTCAAAGTGCAGTGCGGAAGTTGATCTATTAGATAAAAAGTTGTCAGAGATATGTCAAGAAGCTGCTTTATCCTCTGAGTTAAAGAAATCCGGTAGAGCTTCAAATACTTCGAAGAAGGCAGGGCTTTCCCCCAAGTCAAAAGCTGCCCATAAAAAGTCGGGTATGACAGCTGTACCGAGGAAACACCATGTTGATGATGGACTAAGCTCCCAGGCTAATGATAGTTTGAAAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTCACTTCCCCATTTCCATATTTTGTGAAAATCATGAAGAAGTTCAATGTCTGTGGATCATACACTTTGAAAATCCCATGCCAGTTCTCTACTGCACATCTCCCTGCTTGCAATACAGAAGTTACGCTTCGCAATTCAAGAGGCAAACGTTGGACTGTGAACTCCGTCCCATATGTTCAAGGGGAAACAACTATTCACACTTTTTGTGGCGGATGGAATGCCTTTGTTCGTGATAATGACATCAATTTTGGTGACACTTGTATTTTTGAGCTCGTTTCTGATTATGTGATGCACGTTCGTATATCTGGGGTTGGAAAGGAAGGTCTTGATCATCAAAATGGGAATGTGAAACTTAATAGCTAG
Protein sequence

>Msa0145560

MEGTQNCVGSTKSLEEIIYWTHFQFIHFTLFLSITHFHHQLALPKTFSDNLKKKLPANVTLKGPSGIVWNIGLTTRGDTIYFTNGWQQFVEDHSLKQNDFLYNGESHFEVLIFNGNTFCEKAASYFVQKCGQAHSPSSGGVEYSSPEKLWAEDIYWSYFKFTHFTLLLHTNFERQLALPKTFSDNLNKKLPENMGGAGGSSKSWEKEIYWTHFQFIHFIQFLQTTTDFQQQLALPKTFSDNLKKKLPDNVTLKGPSGVVWNVGLTARDDTIYFTNGWQRFVKDHSLKENDFLVFKYNGESLFEAASYFVGKCGQAHTEQGCNKGKSSNNSVEEVSTPSNGGVECSSPEKSWEEDIYWTHFQFIHFTQLLPKDFKQQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFVDGWQRFVNDHSLKDNDFLVFNYNESFCEKEASYFVGKCGHTQTELGGSKAKETNNSIEEVNTASNGGVECGTPLAVPVETTNEKTFNAGVKSDSPEQFIADTVTKTTAIQFPYQPTGKRSKRRSSTSANCCWRALDWVAYNKQHSVTIAVPSHTTNQKTKKSVNEVTPGRSKKRGRQAKTATSGERAIDWVACNKENSEAAILNRSGKADGHDILSGASLSKLSPHDEKEIAQSFTSSFPYFVKIMKTFNVERPRILDHLPNCKIKIILHNLKGEQWTVNSVPRTRLHASHILCGGWLNFVRGNSLKIGDVCIFELIGECELRVRINEVGKDGLDSQEVASHKTSRFMPKKHKISSKCSAEVDLLDKKLSEICQEAALSSELKKSGRASNTSKKAGLSPKSKAAHKKSGMTAVPRKHHVDDGLSSQANDSLKMLFALDEQRVAEAFTSPFPYFVKIMKKFNVCGSYTLKIPCQFSTAHLPACNTEVTLRNSRGKRWTVNSVPYVQGETTIHTFCGGWNAFVRDNDINFGDTCIFELVSDYVMHVRISGVGKEGLDHQNGNVKLNS*