Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147900 | XP_013466206.1 | 96.472 | 992 | 23 | 5 | 1 | 989 | 1 | 983 | 0.0 | 1885 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147900 | sp|D5LXJ0|CIP73_LOTJA | 35.714 | 448 | 252 | 12 | 6 | 431 | 3 | 436 | 4.02e-57 | 213 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147900 | A0A072VF72 | 96.472 | 992 | 23 | 5 | 1 | 989 | 1 | 983 | 0.0 | 1885 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0147900 | Msa1335780 | 0.800827 | 1.200612e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147900 | MtrunA17_Chr1g0157381 | 88.481 | 981 | 31 | 8 | 14 | 989 | 17 | 920 | 0.0 | 1645 |
Msa0147900 | MtrunA17_Chr4g0065101 | 36.199 | 442 | 239 | 11 | 10 | 428 | 11 | 432 | 2.02e-59 | 217 |
Msa0147900 | MtrunA17_Chr8g0370631 | 36.709 | 79 | 50 | 0 | 17 | 95 | 10 | 88 | 7.61e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147900 | AT5G42220.2 | 46.344 | 889 | 378 | 25 | 1 | 856 | 1 | 823 | 0.0 | 606 |
Msa0147900 | AT5G42220.1 | 46.344 | 889 | 378 | 25 | 1 | 856 | 1 | 823 | 0.0 | 606 |
Msa0147900 | AT5G25270.1 | 33.267 | 502 | 259 | 19 | 24 | 492 | 20 | 478 | 5.14e-52 | 194 |
Msa0147900 | AT5G11080.3 | 33.939 | 165 | 91 | 6 | 24 | 184 | 10 | 160 | 3.19e-13 | 72.4 |
Msa0147900 | AT5G11080.1 | 33.939 | 165 | 91 | 6 | 24 | 184 | 10 | 160 | 7.16e-13 | 71.6 |
Find 335 sgRNAs with CRISPR-Local
Find 778 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGTAGGGTGCACGGGTTTC+TGG | 0.081281 | 1_4:+8004958 | None:intergenic |
ATGTTCATCTGTGGGCTTTC+TGG | 0.145540 | 1_4:+8005153 | None:intergenic |
CTCTGTTCATTTACCTGTTC+AGG | 0.186974 | 1_4:+8007634 | None:intergenic |
CTTTCTTGTACAGGAATATT+TGG | 0.188581 | 1_4:-8004191 | Msa0147900:intron |
TGACAAACCTGCACCATTAT+AGG | 0.224010 | 1_4:+8010413 | None:intergenic |
AAGGGCTTCTGATGATCTTT+TGG | 0.228774 | 1_4:-8004356 | Msa0147900:CDS |
TATGCACATAAACTTAAATT+AGG | 0.249919 | 1_4:+8004111 | None:intergenic |
GCAGGTTGGCAGTCAGGATA+TGG | 0.262907 | 1_4:-8005310 | Msa0147900:CDS |
GCAGGTTGACAGTCAGGATA+TGG | 0.263137 | 1_4:-8005112 | Msa0147900:CDS |
GGGTGCACTTCTACTTGAAC+TGG | 0.270093 | 1_4:-8010612 | Msa0147900:CDS |
GAAGAAGTTTGTGCGGAATT+AGG | 0.272535 | 1_4:+8012648 | None:intergenic |
CCCCAAATGGTTTATTGGTT+TGG | 0.272709 | 1_4:-8004009 | Msa0147900:three_prime_UTR |
CCCTGCTAGTTGATTGCATT+TGG | 0.273481 | 1_4:+8007683 | None:intergenic |
AGGTTAGTTGAAGATATATT+TGG | 0.275645 | 1_4:+8011650 | None:intergenic |
GAGCCCGGTTCTGGTGATTC+AGG | 0.283347 | 1_4:-8008107 | Msa0147900:CDS |
TCATTTACCTGTTCAGGTCT+TGG | 0.283401 | 1_4:+8007640 | None:intergenic |
GACTATTAATGTTGGGGATC+AGG | 0.292530 | 1_4:-8012905 | Msa0147900:CDS |
AAGCTGCTCGAAGGACGTTC+TGG | 0.292892 | 1_4:-8004145 | Msa0147900:CDS |
AGATAGATAGATAGATAGAT+AGG | 0.301303 | 1_4:-8013808 | Msa0147900:five_prime_UTR |
ACTAGCAGGGACTTGTCTTC+TGG | 0.308253 | 1_4:-8007670 | Msa0147900:CDS |
CTTGTCCCTTCCCCATTGTT+TGG | 0.310487 | 1_4:+8008146 | None:intergenic |
TTCTTGGGACTATTAATGTT+GGG | 0.313385 | 1_4:-8012912 | Msa0147900:CDS |
CAGTCCAAGAGGAGCAGTTT+TGG | 0.314139 | 1_4:+8007264 | None:intergenic |
TATTACCAACAGAGTTTCTA+AGG | 0.317262 | 1_4:+8007916 | None:intergenic |
AGGAATTGCTATGCAGCATT+TGG | 0.319967 | 1_4:-8010633 | Msa0147900:CDS |
ACCTGCACCATTATAGGATT+TGG | 0.321015 | 1_4:+8010419 | None:intergenic |
ATGCTAACTGGAACGGAAAC+AGG | 0.333341 | 1_4:-8005084 | Msa0147900:CDS |
TTGTGCCCCAAATGGTTTAT+TGG | 0.333764 | 1_4:-8004014 | Msa0147900:three_prime_UTR |
GCACCAATTGTTTCAGCAAT+TGG | 0.338308 | 1_4:-8008176 | Msa0147900:CDS |
ATCCAAACCAATAAACCATT+TGG | 0.342631 | 1_4:+8004007 | None:intergenic |
TCTTCAACTCCTGCAACTTT+AGG | 0.346394 | 1_4:-8008330 | Msa0147900:CDS |
CCTCTGCCCTCTTTCCGTTC+CGG | 0.349517 | 1_4:+8005275 | None:intergenic |
CACCGTAGTGAGCCCGGTTC+TGG | 0.349753 | 1_4:-8008116 | Msa0147900:CDS |
TGTTGGATTGAGGTGATTAA+TGG | 0.349927 | 1_4:-8003922 | Msa0147900:three_prime_UTR |
CTTCAAACAAGCTCCTTGTT+TGG | 0.351103 | 1_4:-8008366 | Msa0147900:CDS |
CTGTCAACCTGCAGGGCAAT+CGG | 0.351452 | 1_4:+8005123 | None:intergenic |
ATGAGTCGTTGCTGATTAAC+AGG | 0.352289 | 1_4:+8013351 | None:intergenic |
GAACATGCACTCTCTCAAAA+TGG | 0.354321 | 1_4:-8011753 | Msa0147900:intron |
ATGAGCGGACGTGGGGCTTC+CGG | 0.360117 | 1_4:-8007598 | Msa0147900:CDS |
ACAACTTTGTAAATCTTGAT+TGG | 0.360242 | 1_4:+8007369 | None:intergenic |
GCAGTTTATATTTCTCCATC+AGG | 0.362139 | 1_4:-8010443 | Msa0147900:CDS |
TTCTGATAATCGAAGTTTGC+AGG | 0.364782 | 1_4:-8004926 | Msa0147900:intron |
TAATGATGAGAGAGATGTTT+TGG | 0.365444 | 1_4:-8007416 | Msa0147900:CDS |
CCCTCCAAGGGCTTGTATCA+TGG | 0.372475 | 1_4:+8005014 | None:intergenic |
TTGTGACTCTAGCATATTGC+AGG | 0.375677 | 1_4:-8010728 | Msa0147900:intron |
TTTCACACAGTGTGGTTCTT+GGG | 0.376592 | 1_4:-8012927 | Msa0147900:CDS |
TCCAAACCAATAAACCATTT+GGG | 0.378068 | 1_4:+8004008 | None:intergenic |
GGAGCACTTCCAACACCAAC+GGG | 0.378459 | 1_4:+8008306 | None:intergenic |
CAGTCAGAGTCAGTACAAAT+AGG | 0.378536 | 1_4:-8010653 | Msa0147900:CDS |
CCGATGCCAGAAGGGTTAGA+TGG | 0.380811 | 1_4:+8008038 | None:intergenic |
GTAATATGATTTCAGGTTAT+CGG | 0.381781 | 1_4:-8012720 | Msa0147900:intron |
TTAATTTGATAAATGCTGAT+AGG | 0.382229 | 1_4:-8005536 | Msa0147900:CDS |
AGATGACAATGGAGCTGAAT+CGG | 0.385957 | 1_4:+8007962 | None:intergenic |
GATCCGTCATCAGCACCTTT+AGG | 0.387358 | 1_4:+8005645 | None:intergenic |
ATTTCACACAGTGTGGTTCT+TGG | 0.390711 | 1_4:-8012928 | Msa0147900:CDS |
GAATGGCCATACATTGCATT+TGG | 0.393216 | 1_4:-8013174 | Msa0147900:CDS |
CTAAATAGTCCTGCTTTGAA+TGG | 0.397811 | 1_4:-8005450 | Msa0147900:CDS |
TGCCCTGCAGGTTGACAGTC+AGG | 0.399355 | 1_4:-8005118 | Msa0147900:CDS |
GCTGATATGACATTTCTAAC+AGG | 0.399849 | 1_4:+8008068 | None:intergenic |
TGCCCAGCAGGTTGGCAGTC+AGG | 0.400197 | 1_4:-8005316 | Msa0147900:CDS |
TGTTGCAACGAGAGTCTTGC+CGG | 0.402364 | 1_4:-8004325 | Msa0147900:CDS |
AAAGGAAACAATGTTGGATC+AGG | 0.404130 | 1_4:-8012976 | Msa0147900:intron |
GTTCAGATTCCTATGGCTGC+TGG | 0.407499 | 1_4:-8011946 | Msa0147900:CDS |
CCTCCAAGGGCTTGTATCAT+GGG | 0.410630 | 1_4:+8005015 | None:intergenic |
CGAACCTGAATCACCAGAAC+CGG | 0.412370 | 1_4:+8008103 | None:intergenic |
ATCAGGGCCAAATCCTATAA+TGG | 0.413483 | 1_4:-8010426 | Msa0147900:CDS |
ACTCTCCCATCTAACCCTTC+TGG | 0.413671 | 1_4:-8008044 | Msa0147900:CDS |
GCTGCTGGCAGCACATCAAC+TGG | 0.416647 | 1_4:-8008014 | Msa0147900:CDS |
GAGCTCCACGTAGCCGTGTT+GGG | 0.419346 | 1_4:-8012954 | Msa0147900:CDS |
AAGATTCTAGAGTCTTCGTT+CGG | 0.420066 | 1_4:+8013914 | None:intergenic |
ACCTTTAGGAGGTTGGAGTC+TGG | 0.421199 | 1_4:+8005659 | None:intergenic |
GGTCAGCCCGATTGCCCTGC+AGG | 0.422823 | 1_4:-8005130 | Msa0147900:CDS |
GTTCTTGGGACTATTAATGT+TGG | 0.423693 | 1_4:-8012913 | Msa0147900:CDS |
TTGTTCAGAAACATTGGTAC+TGG | 0.424220 | 1_4:+8013609 | None:intergenic |
ATCTGAACCAAGACCTGAAC+AGG | 0.426549 | 1_4:-8007647 | Msa0147900:CDS |
AGGAAATCAAGCTGGAAATC+AGG | 0.426719 | 1_4:-8012007 | Msa0147900:CDS |
GGAATTGCTATGCAGCATTT+GGG | 0.432404 | 1_4:-8010632 | Msa0147900:CDS |
GCTGGAAATCAGGCACCATC+TGG | 0.433495 | 1_4:-8011997 | Msa0147900:CDS |
TATCCTGACTGCCAACCTGC+TGG | 0.435244 | 1_4:+8005313 | None:intergenic |
TTGACTCACCTGATGGCTTA+AGG | 0.438048 | 1_4:-8005395 | Msa0147900:CDS |
TTGTCTTTGAAGAGAGAAAC+GGG | 0.438410 | 1_4:+8013396 | None:intergenic |
CCAACGGGGCCTAAAGTTGC+AGG | 0.440187 | 1_4:+8008321 | None:intergenic |
GACAAAATTGCAACTGAAGT+AGG | 0.442503 | 1_4:-8013378 | Msa0147900:CDS |
TTTCCTTCAGTTTCGTTCCC+AGG | 0.443315 | 1_4:+8012024 | None:intergenic |
ACGGAAACAGGGCAGGGTGG+TGG | 0.443483 | 1_4:-8005072 | Msa0147900:CDS |
TTCGCAGTGTTAACATAGTT+CGG | 0.443754 | 1_4:+8010588 | None:intergenic |
GATATGGGGAATATGCTAAC+TGG | 0.446741 | 1_4:-8005096 | Msa0147900:CDS |
TCACTGCCGGACCCCGTAGC+AGG | 0.447048 | 1_4:+8013122 | None:intergenic |
CTTTGAATGGTTTGTTGGAA+GGG | 0.448136 | 1_4:-8005437 | Msa0147900:CDS |
CCTGCCAAAACTGCTCCTCT+TGG | 0.448981 | 1_4:-8007268 | Msa0147900:CDS |
CCTTCTGGCATCGGAGCTGC+TGG | 0.449331 | 1_4:-8008029 | Msa0147900:CDS |
TGTTGGCAACCCTTGTGTAT+TGG | 0.451695 | 1_4:+8011601 | None:intergenic |
CGTACAGAACAGTTGCTTAG+TGG | 0.453630 | 1_4:-8011551 | Msa0147900:CDS |
CCCTTTCCCTGCTAGACAGC+TGG | 0.454165 | 1_4:+8004374 | None:intergenic |
ACTGCGAATGGGACAGTCTT+CGG | 0.454831 | 1_4:-8010573 | Msa0147900:intron |
TCCTATCAGCCACTGGTTGA+AGG | 0.458836 | 1_4:+8004452 | None:intergenic |
TAATTCCGCACAAACTTCTT+CGG | 0.459355 | 1_4:-8012646 | Msa0147900:intron |
GAGCCAATTGCTGAAACAAT+TGG | 0.459970 | 1_4:+8008173 | None:intergenic |
AGCTGCTCGAAGGACGTTCT+GGG | 0.461367 | 1_4:-8004144 | Msa0147900:CDS |
CAAAACTGCTCCTCTTGGAC+TGG | 0.461628 | 1_4:-8007263 | Msa0147900:CDS |
TTCTTTCATCAATCAAAGTC+AGG | 0.461942 | 1_4:-8005616 | Msa0147900:CDS |
ATGCAGTCCAGCTGTCTAGC+AGG | 0.464753 | 1_4:-8004381 | Msa0147900:CDS |
GAGGGAACTTCTGCTGATCT+AGG | 0.464850 | 1_4:-8010692 | Msa0147900:CDS |
CTGACTACCGCTGGTGGGCA+AGG | 0.465410 | 1_4:+8005503 | None:intergenic |
CAAACAAGCTCCTTGTTTGG+CGG | 0.466746 | 1_4:-8008363 | Msa0147900:CDS |
CAGAGTTTCTAAGGTGTGAC+TGG | 0.466854 | 1_4:+8007925 | None:intergenic |
TCTTGGGACTATTAATGTTG+GGG | 0.468006 | 1_4:-8012911 | Msa0147900:CDS |
GCAGGAGTGTGTGTCTGATT+TGG | 0.470969 | 1_4:+8013140 | None:intergenic |
AAATATATCTTCAACTAACC+TGG | 0.471915 | 1_4:-8011648 | Msa0147900:CDS |
GATATGGGGAATATGTTAAC+CGG | 0.471960 | 1_4:-8005294 | Msa0147900:CDS |
GCAGAATCTGTTGTTAATGC+TGG | 0.472329 | 1_4:-8010470 | Msa0147900:CDS |
ATGTGAATGTTTACGTTCCT+AGG | 0.472527 | 1_4:+8008285 | None:intergenic |
TTGGCTCTAGACCAAACAAT+GGG | 0.473293 | 1_4:-8008157 | Msa0147900:CDS |
TATCCTGACTGTCAACCTGC+AGG | 0.474034 | 1_4:+8005115 | None:intergenic |
TGTCAGTCAGATTGCCCAGC+AGG | 0.474074 | 1_4:-8005328 | Msa0147900:CDS |
TCATGTTGTTCAGATTCCTA+TGG | 0.474117 | 1_4:-8011953 | Msa0147900:CDS |
CCATCTAACCCTTCTGGCAT+CGG | 0.474223 | 1_4:-8008038 | Msa0147900:CDS |
ACTTTAGGCCCCGTTGGTGT+TGG | 0.474796 | 1_4:-8008315 | Msa0147900:CDS |
ACTATTAATGTTGGGGATCA+GGG | 0.474865 | 1_4:-8012904 | Msa0147900:CDS |
TCCTGCTTTGAATGGTTTGT+TGG | 0.475916 | 1_4:-8005442 | Msa0147900:CDS |
AACTATGTTAACACTGCGAA+TGG | 0.476187 | 1_4:-8010585 | Msa0147900:CDS |
TCTCGCCTTTCACTTGAAGA+TGG | 0.477787 | 1_4:+8007301 | None:intergenic |
CACACTCCTGCTACGGGGTC+CGG | 0.479486 | 1_4:-8013128 | Msa0147900:CDS |
TGTCAACCTGCAGGGCAATC+GGG | 0.479493 | 1_4:+8005124 | None:intergenic |
CAGACAGTGTGTTGAGTGAA+TGG | 0.480138 | 1_4:+8011793 | None:intergenic |
ACTTTGATTGATGAAAGAAC+TGG | 0.480329 | 1_4:+8005620 | None:intergenic |
AAAATATATTGCAAACACTC+GGG | 0.480549 | 1_4:-8005575 | Msa0147900:CDS |
GCCAAATGCAATCAACTAGC+AGG | 0.482738 | 1_4:-8007684 | Msa0147900:CDS |
TTCATTCCCGTAGGGTGCAC+GGG | 0.484925 | 1_4:+8004951 | None:intergenic |
GAGCTTGTTTGAAGTGGAAA+TGG | 0.485347 | 1_4:+8008375 | None:intergenic |
ACCGCGGAGATGAGCGGACG+TGG | 0.485367 | 1_4:-8007607 | Msa0147900:CDS |
GCATTTCTCAAGACATTACT+CGG | 0.487020 | 1_4:-8012873 | Msa0147900:CDS |
GTTGGTTGCACTTCTGAAAG+TGG | 0.487800 | 1_4:-8007565 | Msa0147900:CDS |
GGCTGACCATGTTCATCTGT+GGG | 0.487914 | 1_4:+8005145 | None:intergenic |
CAGGTTGACAGTCAGGATAT+GGG | 0.489854 | 1_4:-8005111 | Msa0147900:CDS |
AGATTCTAGAGTCTTCGTTC+GGG | 0.490096 | 1_4:+8013915 | None:intergenic |
ACCTTCAACCAGTGGCTGAT+AGG | 0.490194 | 1_4:-8004453 | Msa0147900:CDS |
CCAGCAGCTCCGATGCCAGA+AGG | 0.490801 | 1_4:+8008029 | None:intergenic |
GTGGTTAGTGCTTCAAGTGT+TGG | 0.491485 | 1_4:+8011584 | None:intergenic |
ATCTCTCTCATCATTACTAC+AGG | 0.491809 | 1_4:+8007423 | None:intergenic |
CAGGTTGGCAGTCAGGATAT+GGG | 0.492293 | 1_4:-8005309 | Msa0147900:CDS |
AACTGGAACGGAAACAGGGC+AGG | 0.493231 | 1_4:-8005079 | Msa0147900:CDS |
CATCAGCACCTTTAGGAGGT+TGG | 0.493318 | 1_4:+8005652 | None:intergenic |
TTTCATTCCCGTAGGGTGCA+CGG | 0.495737 | 1_4:+8004950 | None:intergenic |
GCTTTGAATGGTTTGTTGGA+AGG | 0.495809 | 1_4:-8005438 | Msa0147900:CDS |
TCAGACACACACTCCTGCTA+CGG | 0.495909 | 1_4:-8013135 | Msa0147900:CDS |
CAGACACACACTCCTGCTAC+GGG | 0.497357 | 1_4:-8013134 | Msa0147900:CDS |
AACATGCTCCTTAAGCCATC+AGG | 0.499359 | 1_4:+8005387 | None:intergenic |
AACAAGGAGCTTGTTTGAAG+TGG | 0.499575 | 1_4:+8008369 | None:intergenic |
GTTGGGGATCAGGGTGGTGA+AGG | 0.499678 | 1_4:-8012895 | Msa0147900:CDS |
GTGTTGAGTGAATGGGGAAT+TGG | 0.500146 | 1_4:+8011801 | None:intergenic |
ATTGTATCACAAGCCCTTGG+TGG | 0.501552 | 1_4:-8005210 | Msa0147900:CDS |
GATGACAATGGAGCTGAATC+GGG | 0.503305 | 1_4:+8007963 | None:intergenic |
GCGAATCAATCTTCAAATGA+AGG | 0.505900 | 1_4:-8013640 | Msa0147900:CDS |
ATTATAGGATTTGGCCCTGA+TGG | 0.508302 | 1_4:+8010428 | None:intergenic |
TTTGTCTTTGAAGAGAGAAA+CGG | 0.510561 | 1_4:+8013395 | None:intergenic |
CTGGTGATTCAGGTTCGACA+CGG | 0.513653 | 1_4:-8008097 | Msa0147900:CDS |
GATTTACAAAGTTGTTCTAG+TGG | 0.515216 | 1_4:-8007361 | Msa0147900:CDS |
AATGAAAGCACAAGATGTAC+AGG | 0.515807 | 1_4:+8003836 | None:intergenic |
GGAGCTCCACGTAGCCGTGT+TGG | 0.515830 | 1_4:-8012955 | Msa0147900:CDS |
GGCTCTGCAGCAGAGAATAG+TGG | 0.516233 | 1_4:+8004979 | None:intergenic |
ATCTGAACAACATGAGGAAA+CGG | 0.516291 | 1_4:+8011961 | None:intergenic |
TTGGCGTGTTGTGCCCCAAA+TGG | 0.517467 | 1_4:-8004022 | Msa0147900:three_prime_UTR |
TGTGGCGGGTTTAATGTCTC+AGG | 0.517663 | 1_4:-8005475 | Msa0147900:CDS |
ATGTTAACCGGAACGGAAAG+AGG | 0.518450 | 1_4:-8005282 | Msa0147900:CDS |
ACTGCATTGAAAGAAGGAAC+AGG | 0.520422 | 1_4:+8011916 | None:intergenic |
CGGAACGGAAAGAGGGCAGA+GGG | 0.521087 | 1_4:-8005274 | Msa0147900:CDS |
TCCACTAAAGATGTTGAGAA+TGG | 0.521526 | 1_4:-8013191 | Msa0147900:intron |
ATTCCTACTGCATTGAAAGA+AGG | 0.523356 | 1_4:+8011910 | None:intergenic |
TTTGAATTCATTTGCAAATG+GGG | 0.523593 | 1_4:-8012691 | Msa0147900:CDS |
GCCAAATCCTATAATGGTGC+AGG | 0.524609 | 1_4:-8010420 | Msa0147900:intron |
CAAAATATATTGCAAACACT+CGG | 0.525718 | 1_4:-8005576 | Msa0147900:CDS |
GATAGATAGATAGATAGATA+GGG | 0.526675 | 1_4:-8013807 | Msa0147900:intron |
CCAGCTGTCTAGCAGGGAAA+GGG | 0.526769 | 1_4:-8004374 | Msa0147900:CDS |
ATCTTGTTGTTCAGAAACAT+TGG | 0.528977 | 1_4:+8013603 | None:intergenic |
GGGCTGACCATGTTCATCTG+TGG | 0.529144 | 1_4:+8005144 | None:intergenic |
TCTGCTGATCTAGGTGTAAG+AGG | 0.529800 | 1_4:-8010683 | Msa0147900:CDS |
CCAAGGGCTTGTGATACAAT+GGG | 0.531514 | 1_4:+8005213 | None:intergenic |
CCAGAAACCCGTGCACCCTA+CGG | 0.531887 | 1_4:-8004958 | Msa0147900:CDS |
TTAACAGTTGTATCCAATGT+TGG | 0.534016 | 1_4:-8003939 | Msa0147900:three_prime_UTR |
TTTGAACCAAATGCAATGTA+TGG | 0.535178 | 1_4:+8013168 | None:intergenic |
TCCAGCTGTCTAGCAGGGAA+AGG | 0.535517 | 1_4:-8004375 | Msa0147900:CDS |
CCCATGATACAAGCCCTTGG+AGG | 0.535521 | 1_4:-8005015 | Msa0147900:CDS |
GCTTCCGGTGTATCCTCAGT+TGG | 0.536156 | 1_4:-8007583 | Msa0147900:CDS |
GATGGAGAAATATAAACTGC+TGG | 0.536793 | 1_4:+8010446 | None:intergenic |
GGGGTGGTGTTGACCTCTCA+AGG | 0.536912 | 1_4:-8005254 | Msa0147900:CDS |
TGCAGGACGCATGGAGCGAG+AGG | 0.537065 | 1_4:-8010711 | Msa0147900:CDS |
TGGTGATTCAGGTTCGACAC+GGG | 0.537877 | 1_4:-8008096 | Msa0147900:CDS |
CGGTAGTCAGATTGATGTGG+CGG | 0.538847 | 1_4:-8005490 | Msa0147900:CDS |
AAAACTGCTCCTCTTGGACT+GGG | 0.539076 | 1_4:-8007262 | Msa0147900:CDS |
TTGTATCACAAGCCCTTGGT+GGG | 0.540065 | 1_4:-8005209 | Msa0147900:CDS |
TGACAGTGTTCATCATCTGC+GGG | 0.540994 | 1_4:+8005346 | None:intergenic |
ACCAGACTCCAACCTCCTAA+AGG | 0.542230 | 1_4:-8005660 | Msa0147900:CDS |
ACCAAGGGCTTGTGATACAA+TGG | 0.542806 | 1_4:+8005212 | None:intergenic |
CAGAAACCCGTGCACCCTAC+GGG | 0.542977 | 1_4:-8004957 | Msa0147900:CDS |
AACTCTGTTGGTAATATGCA+AGG | 0.543610 | 1_4:-8007909 | Msa0147900:CDS |
GAAACTGAAGGAAATCAAGC+TGG | 0.543666 | 1_4:-8012015 | Msa0147900:CDS |
TAGGAGCATTCATTGTGCCC+TGG | 0.544651 | 1_4:+8012667 | None:intergenic |
AAGATTGATTCGCCATGGTA+TGG | 0.545482 | 1_4:+8013650 | None:intergenic |
AGACAGTGTGTTGAGTGAAT+GGG | 0.545823 | 1_4:+8011794 | None:intergenic |
AAATCAGGCACCATCTGGAC+AGG | 0.545938 | 1_4:-8011992 | Msa0147900:CDS |
TGCACTAGCTGTCTCACTGC+CGG | 0.547750 | 1_4:+8013109 | None:intergenic |
GTCTGTGTTCATAAATCGCA+TGG | 0.548128 | 1_4:-8011775 | Msa0147900:CDS |
ATCCTGACTGCCAACCTGCT+GGG | 0.548407 | 1_4:+8005314 | None:intergenic |
CTAGCATATTGCAGGACGCA+TGG | 0.549101 | 1_4:-8010720 | Msa0147900:intron |
TGACTACCGCTGGTGGGCAA+GGG | 0.550222 | 1_4:+8005504 | None:intergenic |
ACTGAACACCGTAGTGAGCC+CGG | 0.552562 | 1_4:-8008122 | Msa0147900:CDS |
ATCAATCTGACTACCGCTGG+TGG | 0.553084 | 1_4:+8005497 | None:intergenic |
GGTGCACTTCTACTTGAACT+GGG | 0.554167 | 1_4:-8010611 | Msa0147900:CDS |
AGAAAGTGGACCGCCAAACA+AGG | 0.554785 | 1_4:+8008353 | None:intergenic |
CCAGGTTGACCTTCAACCAG+TGG | 0.554927 | 1_4:-8004461 | Msa0147900:intron |
TATGAGTGGTTTAGAGCGTA+AGG | 0.555258 | 1_4:-8007239 | Msa0147900:intron |
TTCTGAAAGTGGAGTAGAGA+AGG | 0.555816 | 1_4:-8007554 | Msa0147900:intron |
ACTATGTTAACACTGCGAAT+GGG | 0.555829 | 1_4:-8010584 | Msa0147900:CDS |
TCAATCAAAGTCAGGAAACC+AGG | 0.557847 | 1_4:-8005608 | Msa0147900:CDS |
CCATGATACAAGCCCTTGGA+GGG | 0.557884 | 1_4:-8005014 | Msa0147900:CDS |
GAACAACATGAGGAAACGGT+TGG | 0.558266 | 1_4:+8011965 | None:intergenic |
CCCATTGTATCACAAGCCCT+TGG | 0.558380 | 1_4:-8005213 | Msa0147900:CDS |
ATTTGAAGATTGATTCGCCA+TGG | 0.560305 | 1_4:+8013645 | None:intergenic |
ATGCCCATGATACAAGCCCT+TGG | 0.560373 | 1_4:-8005018 | Msa0147900:CDS |
ATTCTGCTCGTTGATCTCCC+AGG | 0.560542 | 1_4:+8011630 | None:intergenic |
GGTTCTGTAGCAGAGAATAG+TGG | 0.560598 | 1_4:+8005174 | None:intergenic |
ATGATACAAGCCCTTGGAGG+GGG | 0.560726 | 1_4:-8005012 | Msa0147900:CDS |
CGATCAATCCTATCAGCCAC+TGG | 0.564835 | 1_4:+8004445 | None:intergenic |
GTATCACAAGCCCTTGGTGG+GGG | 0.565830 | 1_4:-8005207 | Msa0147900:CDS |
GCAGGAGTTGAAGAAGAAAG+TGG | 0.566669 | 1_4:+8008339 | None:intergenic |
CAGTTTATATTTCTCCATCA+GGG | 0.566861 | 1_4:-8010442 | Msa0147900:CDS |
CGATGCCAGAAGGGTTAGAT+GGG | 0.567423 | 1_4:+8008039 | None:intergenic |
ACGGAAAGAGGGCAGAGGGG+TGG | 0.568041 | 1_4:-8005270 | Msa0147900:CDS |
AGTCAGGAAACCAGGACAGA+TGG | 0.569397 | 1_4:-8005600 | Msa0147900:CDS |
AAATATATTGCAAACACTCG+GGG | 0.570038 | 1_4:-8005574 | Msa0147900:CDS |
GGATACGATAGTGAGAAAGA+AGG | 0.570907 | 1_4:+8013298 | None:intergenic |
AATATATCTTCAACTAACCT+GGG | 0.571029 | 1_4:-8011647 | Msa0147900:CDS |
CACATCAATCTGACTACCGC+TGG | 0.573025 | 1_4:+8005494 | None:intergenic |
CCTCTTGGACTGGGTATGAG+TGG | 0.573762 | 1_4:-8007253 | Msa0147900:CDS |
GCTCGAAGGACGTTCTGGGA+GGG | 0.576177 | 1_4:-8004140 | Msa0147900:CDS |
TCCAACAAACCATTCAAAGC+AGG | 0.577193 | 1_4:+8005441 | None:intergenic |
GTGGTGGTCTCGACTTCTCA+AGG | 0.577739 | 1_4:-8005056 | Msa0147900:CDS |
CTGACAGTGTTCATCATCTG+CGG | 0.578106 | 1_4:+8005345 | None:intergenic |
CCGTCATCAGCACCTTTAGG+AGG | 0.578916 | 1_4:+8005648 | None:intergenic |
TGCAGTCCAGCTGTCTAGCA+GGG | 0.580677 | 1_4:-8004380 | Msa0147900:CDS |
TTGGTGTTGGAAGTGCTCCT+AGG | 0.580894 | 1_4:-8008302 | Msa0147900:CDS |
CACCAGAACCGGGCTCACTA+CGG | 0.581466 | 1_4:+8008114 | None:intergenic |
ATGCTCCATCTTCAAGTGAA+AGG | 0.582046 | 1_4:-8007306 | Msa0147900:CDS |
AGAAGAAGATCTGCGTGCGT+TGG | 0.582599 | 1_4:+8013883 | None:intergenic |
GCAGCAGAGAATAGTGGTGG+AGG | 0.584726 | 1_4:+8004985 | None:intergenic |
CCTGCAACTTTAGGCCCCGT+TGG | 0.585045 | 1_4:-8008321 | Msa0147900:CDS |
CCTTCAGTTTCGTTCCCAGG+TGG | 0.586018 | 1_4:+8012027 | None:intergenic |
ACGGGAGTTGACTCACCTGA+TGG | 0.587577 | 1_4:-8005402 | Msa0147900:CDS |
CGCGGAGATGAGCGGACGTG+GGG | 0.588211 | 1_4:-8007605 | Msa0147900:CDS |
TTGAATTCATTTGCAAATGG+GGG | 0.588746 | 1_4:-8012690 | Msa0147900:CDS |
TGAAACAATTGGTGCAAGAG+AGG | 0.589969 | 1_4:+8008184 | None:intergenic |
CCGGAACGGAAAGAGGGCAG+AGG | 0.591299 | 1_4:-8005275 | Msa0147900:CDS |
CAGCGACCCTTGCCCACCAG+CGG | 0.592187 | 1_4:-8005510 | Msa0147900:CDS |
TAATCACCTCAATCCAACAT+TGG | 0.592469 | 1_4:+8003926 | None:intergenic |
TGTATCACAAGCCCTTGGTG+GGG | 0.593198 | 1_4:-8005208 | Msa0147900:CDS |
CAAACAATGGGGAAGGGACA+AGG | 0.594079 | 1_4:-8008145 | Msa0147900:CDS |
CAGCAGCTCCGATGCCAGAA+GGG | 0.595475 | 1_4:+8008030 | None:intergenic |
GGTAGTCAGATTGATGTGGC+GGG | 0.595486 | 1_4:-8005489 | Msa0147900:CDS |
GGGGAATATGCTAACTGGAA+CGG | 0.596357 | 1_4:-8005091 | Msa0147900:CDS |
GTAGCAGAGAATAGTGGTGG+AGG | 0.597993 | 1_4:+8005180 | None:intergenic |
GGGGAATATGTTAACCGGAA+CGG | 0.598453 | 1_4:-8005289 | Msa0147900:CDS |
GTAAACATTCACATACATGC+TGG | 0.598953 | 1_4:-8008276 | Msa0147900:intron |
CCAAATGCAATCAACTAGCA+GGG | 0.599347 | 1_4:-8007683 | Msa0147900:CDS |
CCTCCTAAAGGTGCTGATGA+CGG | 0.599760 | 1_4:-8005648 | Msa0147900:CDS |
GGTGATTCAGGTTCGACACG+GGG | 0.602931 | 1_4:-8008095 | Msa0147900:CDS |
TCTAGACCAAACAATGGGGA+AGG | 0.604140 | 1_4:-8008152 | Msa0147900:CDS |
ATCCTGACTGTCAACCTGCA+GGG | 0.605703 | 1_4:+8005116 | None:intergenic |
TTGTATCCAATGTTGGATTG+AGG | 0.607013 | 1_4:-8003932 | Msa0147900:three_prime_UTR |
GGTATGGCTCCAGCAGCCAT+AGG | 0.607799 | 1_4:+8011937 | None:intergenic |
ATTGAAAGAAGGAACAGGTA+TGG | 0.608235 | 1_4:+8011921 | None:intergenic |
TTGATTGATGAAAGAACTGG+AGG | 0.610446 | 1_4:+8005623 | None:intergenic |
CATTTCTCAAGACATTACTC+GGG | 0.611396 | 1_4:-8012872 | Msa0147900:intron |
TGTTAACCGGAACGGAAAGA+GGG | 0.612431 | 1_4:-8005281 | Msa0147900:CDS |
AGGAGCACTTCCAACACCAA+CGG | 0.613156 | 1_4:+8008305 | None:intergenic |
AAAGTGCTACAAATGAGTGT+TGG | 0.613545 | 1_4:-8004041 | Msa0147900:three_prime_UTR |
TTGTTCTAGTGGAGAAGCAA+CGG | 0.614575 | 1_4:-8007350 | Msa0147900:CDS |
AGTCAGATTGCCCAGCAGGT+TGG | 0.619153 | 1_4:-8005324 | Msa0147900:CDS |
CATGATACAAGCCCTTGGAG+GGG | 0.621770 | 1_4:-8005013 | Msa0147900:CDS |
GAATTGCCTTCCAATACACA+AGG | 0.621791 | 1_4:-8011611 | Msa0147900:CDS |
AGGTTGGCAGTCAGGATATG+GGG | 0.622013 | 1_4:-8005308 | Msa0147900:CDS |
CCACCTGGGAACGAAACTGA+AGG | 0.625846 | 1_4:-8012027 | Msa0147900:CDS |
ATCGGGTGGTAGCTGTGAAG+TGG | 0.627292 | 1_4:+8007980 | None:intergenic |
TCTGTTGAAGCATCCTTGAG+AGG | 0.630215 | 1_4:+8005241 | None:intergenic |
TGCTAACTGGAACGGAAACA+GGG | 0.630324 | 1_4:-8005083 | Msa0147900:CDS |
ATAGGAATCTGAACAACATG+AGG | 0.630849 | 1_4:+8011955 | None:intergenic |
AACAACAACACACCATACCA+TGG | 0.632486 | 1_4:-8013662 | Msa0147900:exon |
CCACTCATACCCAGTCCAAG+AGG | 0.633234 | 1_4:+8007253 | None:intergenic |
TTCAGAAGTGCAACCAACTG+AGG | 0.633745 | 1_4:+8007570 | None:intergenic |
GGTTGGAATGCCTGTCCAGA+TGG | 0.633876 | 1_4:+8011982 | None:intergenic |
TGGGCAAATTTCACACAGTG+TGG | 0.634556 | 1_4:-8012935 | Msa0147900:CDS |
AGGTTGACAGTCAGGATATG+GGG | 0.635586 | 1_4:-8005110 | Msa0147900:CDS |
GAACCTGAATCACCAGAACC+GGG | 0.636088 | 1_4:+8008104 | None:intergenic |
CCGCGGAGATGAGCGGACGT+GGG | 0.638934 | 1_4:-8007606 | Msa0147900:CDS |
TGCTCGAAGGACGTTCTGGG+AGG | 0.640302 | 1_4:-8004141 | Msa0147900:CDS |
CTGGTGGGCAAGGGTCGCTG+AGG | 0.641101 | 1_4:+8005513 | None:intergenic |
GGCAACCCTTGTGTATTGGA+AGG | 0.641582 | 1_4:+8011605 | None:intergenic |
ACAGCACGGAAGATATCTGT+AGG | 0.645362 | 1_4:+8004412 | None:intergenic |
TCAGCTAAAACAGATGACAA+TGG | 0.645638 | 1_4:+8007951 | None:intergenic |
CCAAACCAATAAACCATTTG+GGG | 0.646415 | 1_4:+8004009 | None:intergenic |
TGTGTGAAATTTGCCCAACA+CGG | 0.647094 | 1_4:+8012941 | None:intergenic |
TCAATCTGACTACCGCTGGT+GGG | 0.647138 | 1_4:+8005498 | None:intergenic |
GATGTAAGTAAGCTGCTCGA+AGG | 0.650206 | 1_4:-8004154 | Msa0147900:CDS |
AGAGATACCGCGGAGATGAG+CGG | 0.652439 | 1_4:-8007613 | Msa0147900:CDS |
ATTGGCTCTAGACCAAACAA+TGG | 0.655176 | 1_4:-8008158 | Msa0147900:CDS |
TCTGTAGCAGAGAATAGTGG+TGG | 0.656147 | 1_4:+8005177 | None:intergenic |
GACAGTGTGTTGAGTGAATG+GGG | 0.656266 | 1_4:+8011795 | None:intergenic |
CAGCGGTAGTCAGATTGATG+TGG | 0.657434 | 1_4:-8005493 | Msa0147900:CDS |
GGAACGGAAACAGGGCAGGG+TGG | 0.658322 | 1_4:-8005075 | Msa0147900:CDS |
AGAAAGCCCACAGATGAACA+TGG | 0.659366 | 1_4:-8005151 | Msa0147900:CDS |
ACTGGAACGGAAACAGGGCA+GGG | 0.660931 | 1_4:-8005078 | Msa0147900:CDS |
GCAGGACGCATGGAGCGAGA+GGG | 0.662033 | 1_4:-8010710 | Msa0147900:CDS |
CTAGACCAAACAATGGGGAA+GGG | 0.662121 | 1_4:-8008151 | Msa0147900:CDS |
TCACACCTTAGAAACTCTGT+TGG | 0.665440 | 1_4:-8007921 | Msa0147900:CDS |
CCCACGTCCGCTCATCTCCG+CGG | 0.669954 | 1_4:+8007606 | None:intergenic |
GACAATGGAGCTGAATCGGG+TGG | 0.672692 | 1_4:+8007966 | None:intergenic |
ATTTGCCCAACACGGCTACG+TGG | 0.675650 | 1_4:+8012949 | None:intergenic |
GCAACCAACTGAGGATACAC+CGG | 0.678404 | 1_4:+8007579 | None:intergenic |
ACTGACCGAAGAAGTTTGTG+CGG | 0.679232 | 1_4:+8012641 | None:intergenic |
GGAACGGAAAGAGGGCAGAG+GGG | 0.681060 | 1_4:-8005273 | Msa0147900:CDS |
ACATCAAAGTATGACAGCGG+AGG | 0.682180 | 1_4:+8003899 | None:intergenic |
GCTAGTGCAAATAGTAACCG+AGG | 0.687450 | 1_4:-8013095 | Msa0147900:intron |
TCTGCAGCAGAGAATAGTGG+TGG | 0.699613 | 1_4:+8004982 | None:intergenic |
GCACGGAAGATATCTGTAGG+TGG | 0.700840 | 1_4:+8004415 | None:intergenic |
TCACAACCAGACCCAAACTG+AGG | 0.703188 | 1_4:-8007455 | Msa0147900:intron |
ATTAATGTTGGGGATCAGGG+TGG | 0.704767 | 1_4:-8012901 | Msa0147900:CDS |
AATATATTGCAAACACTCGG+GGG | 0.705829 | 1_4:-8005573 | Msa0147900:CDS |
TTCTGTACGATGCAATACAG+TGG | 0.709351 | 1_4:+8011565 | None:intergenic |
TAATTGTGACTAGCTGACAG+TGG | 0.709682 | 1_4:-8003877 | Msa0147900:three_prime_UTR |
AAATGAACAGAGAGATACCG+CGG | 0.715935 | 1_4:-8007623 | Msa0147900:CDS |
ATTACATCAAAGTATGACAG+CGG | 0.731053 | 1_4:+8003896 | None:intergenic |
TGGCTCTAGACCAAACAATG+GGG | 0.735668 | 1_4:-8008156 | Msa0147900:CDS |
AATTGCCTTCCAATACACAA+GGG | 0.737996 | 1_4:-8011610 | Msa0147900:CDS |
AGACACACACTCCTGCTACG+GGG | 0.754610 | 1_4:-8013133 | Msa0147900:CDS |
GAGCACTTCCAACACCAACG+GGG | 0.778341 | 1_4:+8008307 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTTTTTTTTTTTTTATG+CGG | - | chr1_4:8004332-8004351 | Msa0147900:CDS | 10.0% |
!! | TATTCAAATTCAAAATTTAA+AGG | + | chr1_4:8005958-8005977 | None:intergenic | 10.0% |
!! | AAAAATGTATGTATATAAAT+GGG | + | chr1_4:8006316-8006335 | None:intergenic | 10.0% |
!! | AAAAAATGTATGTATATAAA+TGG | + | chr1_4:8006317-8006336 | None:intergenic | 10.0% |
!!! | ATTGTTTTAATAATATGTAT+GGG | - | chr1_4:8009954-8009973 | Msa0147900:intron | 10.0% |
!!! | TGATTGATTTTTTTTTTATA+TGG | - | chr1_4:8011816-8011835 | Msa0147900:intron | 10.0% |
!!! | GATTGATTTTTTTTTTATAT+GGG | - | chr1_4:8011817-8011836 | Msa0147900:intron | 10.0% |
!!! | TATTTTACTTTTTGTAGAAT+AGG | - | chr1_4:8004063-8004082 | Msa0147900:three_prime_UTR | 15.0% |
!!! | ATTTTACTTTTTGTAGAATA+GGG | - | chr1_4:8004064-8004083 | Msa0147900:three_prime_UTR | 15.0% |
!!! | GCTAAATTTTATCATTTTAA+AGG | - | chr1_4:8004812-8004831 | Msa0147900:intron | 15.0% |
!!! | ACATCAATAAATAATGTTTT+CGG | + | chr1_4:8005068-8005087 | None:intergenic | 15.0% |
!! | GAAGATAAAAAATCATTTAT+AGG | + | chr1_4:8005510-8005529 | None:intergenic | 15.0% |
!!! | GTTGATAATTTATTTACTTT+TGG | - | chr1_4:8005534-8005553 | Msa0147900:CDS | 15.0% |
!!! | AATTATTCATTTTACCAAAA+GGG | + | chr1_4:8005572-8005591 | None:intergenic | 15.0% |
!!! | AAATTATTCATTTTACCAAA+AGG | + | chr1_4:8005573-8005592 | None:intergenic | 15.0% |
!! | AACAAATTAAAGATTTACAA+TGG | + | chr1_4:8006470-8006489 | None:intergenic | 15.0% |
!! | GACATTATAAATAATTAAGT+TGG | - | chr1_4:8007517-8007536 | Msa0147900:intron | 15.0% |
!! | ACATAATAGATTATTGATAA+AGG | - | chr1_4:8007544-8007563 | Msa0147900:intron | 15.0% |
!! | TCAATAATTCCTTTAATAAA+AGG | + | chr1_4:8007727-8007746 | None:intergenic | 15.0% |
!!! | CATTGTTTTAATAATATGTA+TGG | - | chr1_4:8009953-8009972 | Msa0147900:intron | 15.0% |
!! | TACAATGAAACAATATATAT+AGG | + | chr1_4:8010038-8010057 | None:intergenic | 15.0% |
!!! | ATATTTGTTGTAATTATGAT+CGG | - | chr1_4:8010833-8010852 | Msa0147900:intron | 15.0% |
!! | TTATGATAGATATGTAAAAT+AGG | - | chr1_4:8011144-8011163 | Msa0147900:intron | 15.0% |
!!! | TAATTTTAACATTCTTTTGA+AGG | - | chr1_4:8011499-8011518 | Msa0147900:intron | 15.0% |
!! | TTATGTTAAGCTTAATATTT+GGG | - | chr1_4:8011551-8011570 | Msa0147900:CDS | 15.0% |
!! | AATATAAAGGATAAAAAAAG+TGG | - | chr1_4:8011852-8011871 | Msa0147900:intron | 15.0% |
!!! | CATGTTATGTTAATTTATTT+TGG | - | chr1_4:8012950-8012969 | Msa0147900:CDS | 15.0% |
!!! | TAGATGATTCAAAAATATTT+TGG | - | chr1_4:8013228-8013247 | Msa0147900:intron | 15.0% |
!! | AAGTAAAATAATTACAAGAG+TGG | + | chr1_4:8004053-8004072 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTATGCGGTAAT+TGG | - | chr1_4:8004339-8004358 | Msa0147900:CDS | 20.0% |
!!! | CATCAATAAATAATGTTTTC+GGG | + | chr1_4:8005067-8005086 | None:intergenic | 20.0% |
!! | TATTGATGTAATATGATTTC+AGG | - | chr1_4:8005079-8005098 | Msa0147900:CDS | 20.0% |
!!! | TTTTGAATTCATTTGCAAAT+GGG | - | chr1_4:8005114-8005133 | Msa0147900:CDS | 20.0% |
!! | TCAAAGAAGATAAAATTGAA+AGG | + | chr1_4:8005373-8005392 | None:intergenic | 20.0% |
!! | ATTTGATATTTATCACTAGT+AGG | + | chr1_4:8005485-8005504 | None:intergenic | 20.0% |
!!! | ATTATTCATTTTACCAAAAG+GGG | + | chr1_4:8005571-8005590 | None:intergenic | 20.0% |
!!! | TTATGATTTTTATGATGACA+CGG | - | chr1_4:8005600-8005619 | Msa0147900:CDS | 20.0% |
!! | TTTCAAAATTAAACTACTAG+TGG | + | chr1_4:8005643-8005662 | None:intergenic | 20.0% |
!! | TTAAAGGAGTAAAAATTAAG+AGG | + | chr1_4:8005942-8005961 | None:intergenic | 20.0% |
!!! | ATATTTATATTTGCTTTTGC+AGG | - | chr1_4:8006126-8006145 | Msa0147900:intron | 20.0% |
!! | ACAGAATCAGATAAATATAA+AGG | + | chr1_4:8007046-8007065 | None:intergenic | 20.0% |
!!! | CATTATTTTCATTTGTGATT+TGG | - | chr1_4:8007264-8007283 | Msa0147900:CDS | 20.0% |
!! | ATTGTATTCTAAACAAGTTA+AGG | - | chr1_4:8007781-8007800 | Msa0147900:intron | 20.0% |
!! | TTACTCTTCATAATTATATG+TGG | + | chr1_4:8007850-8007869 | None:intergenic | 20.0% |
!! | TTTAATATTACTGAGAATAG+CGG | - | chr1_4:8008244-8008263 | Msa0147900:intron | 20.0% |
!!! | ACTTTTCATGTTTTTAGATT+CGG | - | chr1_4:8008523-8008542 | Msa0147900:intron | 20.0% |
!! | AGTCTATAAATAGACAATTA+AGG | - | chr1_4:8008730-8008749 | Msa0147900:intron | 20.0% |
!! | AAAATATGATATTAGTGTGT+GGG | + | chr1_4:8009007-8009026 | None:intergenic | 20.0% |
!! | AAATAAAAACTATGCTTGTA+GGG | + | chr1_4:8010313-8010332 | None:intergenic | 20.0% |
!!! | TATTTGTTGTAATTATGATC+GGG | - | chr1_4:8010834-8010853 | Msa0147900:intron | 20.0% |
!!! | GTTTAACTTTTAAGTACTTT+CGG | - | chr1_4:8010886-8010905 | Msa0147900:intron | 20.0% |
!! | GTTATGTTAAGCTTAATATT+TGG | - | chr1_4:8011550-8011569 | Msa0147900:CDS | 20.0% |
!! | TATGTTAAGCTTAATATTTG+GGG | - | chr1_4:8011552-8011571 | Msa0147900:CDS | 20.0% |
!!! | TTTTCTAAATTTTTTACTCC+AGG | - | chr1_4:8011770-8011789 | Msa0147900:CDS | 20.0% |
!!! | TTTCTAAATTTTTTACTCCA+GGG | - | chr1_4:8011771-8011790 | Msa0147900:CDS | 20.0% |
!! | GAACATGTAATGTAATATAA+AGG | - | chr1_4:8011839-8011858 | Msa0147900:intron | 20.0% |
!!! | TTAATTTGATAAATGCTGAT+AGG | - | chr1_4:8012270-8012289 | Msa0147900:intron | 20.0% |
!!! | TTTATTTTGGCTACTTATTT+TGG | - | chr1_4:8012963-8012982 | Msa0147900:CDS | 20.0% |
!! | AAATATATCGTTTCATTCAT+AGG | - | chr1_4:8013057-8013076 | Msa0147900:intron | 20.0% |
!! | AATATATCGTTTCATTCATA+GGG | - | chr1_4:8013058-8013077 | Msa0147900:intron | 20.0% |
!! | AAAAATTAAGAGATGTAGAA+GGG | + | chr1_4:8013199-8013218 | None:intergenic | 20.0% |
!! | AAGTTTATGTTTGTATACTT+TGG | - | chr1_4:8013507-8013526 | Msa0147900:intron | 20.0% |
!! | TTTAAATTTCTTTCTTGTAC+AGG | - | chr1_4:8013606-8013625 | Msa0147900:CDS | 20.0% |
!! | TATGCACATAAACTTAAATT+AGG | + | chr1_4:8013698-8013717 | None:intergenic | 20.0% |
! | AGATAGATAGATAGATAGAT+AGG | - | chr1_4:8003994-8004013 | Msa0147900:three_prime_UTR | 25.0% |
! | GATAGATAGATAGATAGATA+GGG | - | chr1_4:8003995-8004014 | Msa0147900:three_prime_UTR | 25.0% |
! | AGCATGATTGTATTGTATAT+GGG | + | chr1_4:8004097-8004116 | None:intergenic | 25.0% |
! | TAGCATGATTGTATTGTATA+TGG | + | chr1_4:8004098-8004117 | None:intergenic | 25.0% |
!!! | CATGCTATTTTCTTTCTATT+AGG | - | chr1_4:8004111-8004130 | Msa0147900:exon | 25.0% |
!! | AACAGAAGATTTTCGATTAA+AGG | + | chr1_4:8004310-8004329 | None:intergenic | 25.0% |
! | TTAATCGAAAATCTTCTGTT+TGG | - | chr1_4:8004310-8004329 | Msa0147900:intron | 25.0% |
!!! | TTTTAGAGGAAAAGTCTTAA+AGG | - | chr1_4:8004478-8004497 | Msa0147900:intron | 25.0% |
! | GCTGATGTAGAAATAATAAA+AGG | + | chr1_4:8004532-8004551 | None:intergenic | 25.0% |
!!! | CATTTTAAAGGAAACAATGT+TGG | - | chr1_4:8004824-8004843 | Msa0147900:intron | 25.0% |
!!! | GTAATATGATTTCAGGTTAT+CGG | - | chr1_4:8005086-8005105 | Msa0147900:CDS | 25.0% |
!!! | GTTTTGAATTCATTTGCAAA+TGG | - | chr1_4:8005113-8005132 | Msa0147900:CDS | 25.0% |
! | TTTGAATTCATTTGCAAATG+GGG | - | chr1_4:8005115-8005134 | Msa0147900:CDS | 25.0% |
! | AACCTAGTAAATTACACAAA+TGG | + | chr1_4:8005224-8005243 | None:intergenic | 25.0% |
!! | TTATTCATTTTACCAAAAGG+GGG | + | chr1_4:8005570-8005589 | None:intergenic | 25.0% |
! | GTGTCATCATAAAAATCATA+AGG | + | chr1_4:8005601-8005620 | None:intergenic | 25.0% |
!! | ATCTTCTATCTAGAATTGAA+AGG | - | chr1_4:8006095-8006114 | Msa0147900:intron | 25.0% |
!! | TCTTCTATCTAGAATTGAAA+GGG | - | chr1_4:8006096-8006115 | Msa0147900:intron | 25.0% |
!! | AGGTTAGTTGAAGATATATT+TGG | + | chr1_4:8006159-8006178 | None:intergenic | 25.0% |
! | AAATATATCTTCAACTAACC+TGG | - | chr1_4:8006158-8006177 | Msa0147900:intron | 25.0% |
! | AATATATCTTCAACTAACCT+GGG | - | chr1_4:8006159-8006178 | Msa0147900:intron | 25.0% |
! | TGTTGTAGTATAAACTTTAC+TGG | - | chr1_4:8006364-8006383 | Msa0147900:intron | 25.0% |
!! | TCCTAAATATGTCCAAATTT+TGG | - | chr1_4:8006416-8006435 | Msa0147900:intron | 25.0% |
! | TCCAAAATTTGGACATATTT+AGG | + | chr1_4:8006420-8006439 | None:intergenic | 25.0% |
! | ATTTAGTTGTGTCCAAAATT+TGG | + | chr1_4:8006431-8006450 | None:intergenic | 25.0% |
! | GATATTATGAGTAAAATTGC+AGG | + | chr1_4:8006728-8006747 | None:intergenic | 25.0% |
! | AATATCAGTTGATTAATCGA+AGG | - | chr1_4:8006742-8006761 | Msa0147900:intron | 25.0% |
!!! | AGAAATTTTAACCAACAAGA+GGG | + | chr1_4:8006843-8006862 | None:intergenic | 25.0% |
!!! | TAGAAATTTTAACCAACAAG+AGG | + | chr1_4:8006844-8006863 | None:intergenic | 25.0% |
!!! | TGAAGTGCATTTTAATTGTA+TGG | - | chr1_4:8006986-8007005 | Msa0147900:intron | 25.0% |
! | ATTGATAAAGGATTGAAGAT+TGG | - | chr1_4:8007556-8007575 | Msa0147900:CDS | 25.0% |
!! | GAGAAGATTCCTTTTATTAA+AGG | - | chr1_4:8007715-8007734 | Msa0147900:intron | 25.0% |
! | CCAATATCTTTGATATTGAT+AGG | + | chr1_4:8007885-8007904 | None:intergenic | 25.0% |
! | CCTATCAATATCAAAGATAT+TGG | - | chr1_4:8007882-8007901 | Msa0147900:intron | 25.0% |
!!! | ACAATCATTTTAGTTTCCAA+AGG | + | chr1_4:8008100-8008119 | None:intergenic | 25.0% |
! | CTCATATATATTTGTACCTT+TGG | - | chr1_4:8008123-8008142 | Msa0147900:CDS | 25.0% |
!! | AATAATAATTGACTCTCCAA+AGG | + | chr1_4:8008142-8008161 | None:intergenic | 25.0% |
! | TATCAATTTCCCATTTACTT+TGG | + | chr1_4:8008194-8008213 | None:intergenic | 25.0% |
! | GGAAAAATTAGAGAACATTA+GGG | + | chr1_4:8008368-8008387 | None:intergenic | 25.0% |
! | AGGAAAAATTAGAGAACATT+AGG | + | chr1_4:8008369-8008388 | None:intergenic | 25.0% |
! | GAAAATATGATATTAGTGTG+TGG | + | chr1_4:8009008-8009027 | None:intergenic | 25.0% |
!! | ACACTAATATCATATTTTCC+TGG | - | chr1_4:8009009-8009028 | Msa0147900:intron | 25.0% |
!! | AATATCATATTTTCCTGGTT+CGG | - | chr1_4:8009014-8009033 | Msa0147900:intron | 25.0% |
!! | AAAACTAATTGTACTTTTCC+TGG | - | chr1_4:8009558-8009577 | Msa0147900:intron | 25.0% |
!!! | GTATTACTTTTGTTCATACA+TGG | - | chr1_4:8010274-8010293 | Msa0147900:intron | 25.0% |
! | AATAAAAACTATGCTTGTAG+GGG | + | chr1_4:8010312-8010331 | None:intergenic | 25.0% |
! | CAAATAAAAACTATGCTTGT+AGG | + | chr1_4:8010314-8010333 | None:intergenic | 25.0% |
! | ACAACTTTGTAAATCTTGAT+TGG | + | chr1_4:8010440-8010459 | None:intergenic | 25.0% |
!! | TTGAACACTGAATTTTTACT+AGG | - | chr1_4:8010864-8010883 | Msa0147900:intron | 25.0% |
! | TTAGTTTCATACAACATTGT+TGG | + | chr1_4:8011068-8011087 | None:intergenic | 25.0% |
! | GTTGTATGAAACTAAATGTT+TGG | - | chr1_4:8011073-8011092 | Msa0147900:intron | 25.0% |
! | AGTGGAAAAAAGAATTGATT+TGG | - | chr1_4:8011870-8011889 | Msa0147900:intron | 25.0% |
! | CAAAATATATTGCAAACACT+CGG | - | chr1_4:8012230-8012249 | Msa0147900:intron | 25.0% |
! | AAAATATATTGCAAACACTC+GGG | - | chr1_4:8012231-8012250 | Msa0147900:intron | 25.0% |
! | GAAAAATTAAGAGATGTAGA+AGG | + | chr1_4:8013200-8013219 | None:intergenic | 25.0% |
!! | ATCTTGTTGTTCAGAAACAT+TGG | + | chr1_4:8004206-8004225 | None:intergenic | 30.0% |
! | TTTGTCTTTGAAGAGAGAAA+CGG | + | chr1_4:8004414-8004433 | None:intergenic | 30.0% |
TTTGAACCAAATGCAATGTA+TGG | + | chr1_4:8004641-8004660 | None:intergenic | 30.0% | |
TTCTTGGGACTATTAATGTT+GGG | - | chr1_4:8004894-8004913 | Msa0147900:intron | 30.0% | |
GTATAAGTTGTAGATACTGT+AGG | + | chr1_4:8004985-8005004 | None:intergenic | 30.0% | |
!! | TTAGTGATGATGTTTTGCTT+TGG | - | chr1_4:8005036-8005055 | Msa0147900:CDS | 30.0% |
TTGAATTCATTTGCAAATGG+GGG | - | chr1_4:8005116-8005135 | Msa0147900:CDS | 30.0% | |
! | TGCCATTTGTGTAATTTACT+AGG | - | chr1_4:8005219-8005238 | Msa0147900:CDS | 30.0% |
AACTACTAGTGGAGAATAAA+AGG | + | chr1_4:8005632-8005651 | None:intergenic | 30.0% | |
!!! | TGTAGCTGAATCCATTTTTT+AGG | - | chr1_4:8005754-8005773 | Msa0147900:intron | 30.0% |
!! | ATATTTGCTTTTGCAGGTTA+TGG | - | chr1_4:8006132-8006151 | Msa0147900:intron | 30.0% |
!! | TATTTGCTTTTGCAGGTTAT+GGG | - | chr1_4:8006133-8006152 | Msa0147900:intron | 30.0% |
GTATGTATATAAATGGGATG+TGG | + | chr1_4:8006310-8006329 | None:intergenic | 30.0% | |
GTATAAACTTTACTGGAAAC+TGG | - | chr1_4:8006371-8006390 | Msa0147900:intron | 30.0% | |
! | GACATATTTAGGATTATCCT+AGG | + | chr1_4:8006409-8006428 | None:intergenic | 30.0% |
GAGATAAAAAAGCAAAGAGA+AGG | + | chr1_4:8006634-8006653 | None:intergenic | 30.0% | |
CATACATATGAGGAGTTTAA+TGG | + | chr1_4:8006656-8006675 | None:intergenic | 30.0% | |
CATTAAACTCCTCATATGTA+TGG | - | chr1_4:8006654-8006673 | Msa0147900:intron | 30.0% | |
CAACAGAATGTGATGTATAT+GGG | + | chr1_4:8006772-8006791 | None:intergenic | 30.0% | |
ACAACAGAATGTGATGTATA+TGG | + | chr1_4:8006773-8006792 | None:intergenic | 30.0% | |
TATCCTATGTGATCTTTAAC+TGG | + | chr1_4:8006797-8006816 | None:intergenic | 30.0% | |
AAAGATCACATAGGATATGA+AGG | - | chr1_4:8006800-8006819 | Msa0147900:intron | 30.0% | |
! | CATGACCATATTCAATTTTC+AGG | - | chr1_4:8007314-8007333 | Msa0147900:CDS | 30.0% |
TTCTGCCTGAAAATTGAATA+TGG | + | chr1_4:8007322-8007341 | None:intergenic | 30.0% | |
CAGTTTATATTTCTCCATCA+GGG | - | chr1_4:8007364-8007383 | Msa0147900:CDS | 30.0% | |
!! | GCAAGGTATTGAAATGAAAA+TGG | + | chr1_4:8007600-8007619 | None:intergenic | 30.0% |
! | GGAATTATTGAGTTCTGATA+TGG | - | chr1_4:8007736-8007755 | Msa0147900:intron | 30.0% |
ACCATGACAACACAAATAAT+GGG | + | chr1_4:8008031-8008050 | None:intergenic | 30.0% | |
!!! | CATGTAGAAGGATGTTTTTT+GGG | - | chr1_4:8008054-8008073 | Msa0147900:CDS | 30.0% |
!!! | ATGTAGAAGGATGTTTTTTG+GGG | - | chr1_4:8008055-8008074 | Msa0147900:CDS | 30.0% |
! | TTTCCAAAGGTACAAATATC+AGG | + | chr1_4:8008087-8008106 | None:intergenic | 30.0% |
TTGGACAAACAAGAAAAACA+GGG | + | chr1_4:8008314-8008333 | None:intergenic | 30.0% | |
ATTGGACAAACAAGAAAAAC+AGG | + | chr1_4:8008315-8008334 | None:intergenic | 30.0% | |
TAAACGGCGTATCATAAAAT+TGG | + | chr1_4:8008333-8008352 | None:intergenic | 30.0% | |
AAAATTAGAGAACATTAGGG+AGG | + | chr1_4:8008365-8008384 | None:intergenic | 30.0% | |
!! | ATTTTGACAGAAGTTCAGAA+TGG | + | chr1_4:8008503-8008522 | None:intergenic | 30.0% |
AGGTAAACTAAACTAGTCAT+AGG | + | chr1_4:8008914-8008933 | None:intergenic | 30.0% | |
TTGTTGTACAATCTAGATCA+TGG | - | chr1_4:8009203-8009222 | Msa0147900:intron | 30.0% | |
AAAATGTTGTATATCTCACC+AGG | + | chr1_4:8009579-8009598 | None:intergenic | 30.0% | |
!!! | TTTTAATTTTGATTCCTGCC+AGG | - | chr1_4:8009597-8009616 | Msa0147900:intron | 30.0% |
TATTACCAACAGAGTTTCTA+AGG | + | chr1_4:8009893-8009912 | None:intergenic | 30.0% | |
! | TAATGATGAGAGAGATGTTT+TGG | - | chr1_4:8010390-8010409 | Msa0147900:intron | 30.0% |
GATTTACAAAGTTGTTCTAG+TGG | - | chr1_4:8010445-8010464 | Msa0147900:CDS | 30.0% | |
! | GGTAAAATCAGAAAAAGTAC+AGG | - | chr1_4:8010477-8010496 | Msa0147900:intron | 30.0% |
! | CATGGTGTTTGAAAATTTTC+TGG | - | chr1_4:8010687-8010706 | Msa0147900:CDS | 30.0% |
ACAAAATATGAAGGGATGAA+TGG | + | chr1_4:8010798-8010817 | None:intergenic | 30.0% | |
ACAAATATGATGTATCCTTG+AGG | + | chr1_4:8010821-8010840 | None:intergenic | 30.0% | |
TGTCTATCATACGATTCAAA+TGG | - | chr1_4:8010947-8010966 | Msa0147900:intron | 30.0% | |
GTCTATCATACGATTCAAAT+GGG | - | chr1_4:8010948-8010967 | Msa0147900:intron | 30.0% | |
TCTATCATACGATTCAAATG+GGG | - | chr1_4:8010949-8010968 | Msa0147900:intron | 30.0% | |
GATGAAATGGTTGAATGATT+GGG | - | chr1_4:8010974-8010993 | Msa0147900:intron | 30.0% | |
ATGAAATGGTTGAATGATTG+GGG | - | chr1_4:8010975-8010994 | Msa0147900:intron | 30.0% | |
GTATGAAACTAAATGTTTGG+TGG | - | chr1_4:8011076-8011095 | Msa0147900:intron | 30.0% | |
ACAATTGTTAGAGAGAAGAT+TGG | - | chr1_4:8011175-8011194 | Msa0147900:intron | 30.0% | |
CAATTGTTAGAGAGAAGATT+GGG | - | chr1_4:8011176-8011195 | Msa0147900:intron | 30.0% | |
AACTTCCATTGTAGAGAAAA+TGG | - | chr1_4:8011201-8011220 | Msa0147900:intron | 30.0% | |
! | GTTTGACATATACTTTTCCT+TGG | + | chr1_4:8011259-8011278 | None:intergenic | 30.0% |
AACCATGTAGAGAGATTTAT+AGG | - | chr1_4:8011276-8011295 | Msa0147900:intron | 30.0% | |
TAGAGAGATTTATAGGTGAA+TGG | - | chr1_4:8011283-8011302 | Msa0147900:intron | 30.0% | |
! | ATAGGTGAATGGTTTGTATT+TGG | - | chr1_4:8011294-8011313 | Msa0147900:intron | 30.0% |
TTATGGAATCAATTGATGCA+TGG | - | chr1_4:8011337-8011356 | Msa0147900:intron | 30.0% | |
!! | AAGGGATGATTTATTTTCAG+AGG | + | chr1_4:8011640-8011659 | None:intergenic | 30.0% |
!!! | TTTGTGGGGCTTTATTTTTT+TGG | - | chr1_4:8011727-8011746 | Msa0147900:intron | 30.0% |
!!! | TAAATTTTTTACTCCAGGGA+TGG | - | chr1_4:8011775-8011794 | Msa0147900:CDS | 30.0% |
AATCAATAAATGTCTCCCAT+TGG | + | chr1_4:8011801-8011820 | None:intergenic | 30.0% | |
!! | GGAAAAAAGAATTGATTTGG+AGG | - | chr1_4:8011873-8011892 | Msa0147900:intron | 30.0% |
ACTTTGATTGATGAAAGAAC+TGG | + | chr1_4:8012189-8012208 | None:intergenic | 30.0% | |
TTCTTTCATCAATCAAAGTC+AGG | - | chr1_4:8012190-8012209 | Msa0147900:intron | 30.0% | |
AAATATATTGCAAACACTCG+GGG | - | chr1_4:8012232-8012251 | Msa0147900:intron | 30.0% | |
GTATGCATGTACTTACAAAA+AGG | - | chr1_4:8012906-8012925 | Msa0147900:CDS | 30.0% | |
ATGTTTACTTACAACTAGTG+TGG | + | chr1_4:8013277-8013296 | None:intergenic | 30.0% | |
ATACAAACATAAACTTACGC+CGG | + | chr1_4:8013503-8013522 | None:intergenic | 30.0% | |
CTTTCTTGTACAGGAATATT+TGG | - | chr1_4:8013615-8013634 | Msa0147900:CDS | 30.0% | |
TCCAAACCAATAAACCATTT+GGG | + | chr1_4:8013801-8013820 | None:intergenic | 30.0% | |
ATCCAAACCAATAAACCATT+TGG | + | chr1_4:8013802-8013821 | None:intergenic | 30.0% | |
! | CTAAATTTTTGCGCATGAAT+TGG | + | chr1_4:8013833-8013852 | None:intergenic | 30.0% |
TTAACAGTTGTATCCAATGT+TGG | - | chr1_4:8013867-8013886 | Msa0147900:five_prime_UTR | 30.0% | |
ATTACATCAAAGTATGACAG+CGG | + | chr1_4:8013913-8013932 | None:intergenic | 30.0% | |
! | AAGATCATCGTCATCGTTTT+TGG | - | chr1_4:8003866-8003885 | Msa0147900:three_prime_UTR | 35.0% |
!! | AAGATTCTAGAGTCTTCGTT+CGG | + | chr1_4:8003895-8003914 | None:intergenic | 35.0% |
!! | ATTTGAAGATTGATTCGCCA+TGG | + | chr1_4:8004164-8004183 | None:intergenic | 35.0% |
GCGAATCAATCTTCAAATGA+AGG | - | chr1_4:8004166-8004185 | Msa0147900:CDS | 35.0% | |
TTGTTCAGAAACATTGGTAC+TGG | + | chr1_4:8004200-8004219 | None:intergenic | 35.0% | |
! | TTGTCTTTGAAGAGAGAAAC+GGG | + | chr1_4:8004413-8004432 | None:intergenic | 35.0% |
GACAAAATTGCAACTGAAGT+AGG | - | chr1_4:8004428-8004447 | Msa0147900:CDS | 35.0% | |
! | CTCAACATCTTTAGTGGATA+AGG | + | chr1_4:8004613-8004632 | None:intergenic | 35.0% |
TCCACTAAAGATGTTGAGAA+TGG | - | chr1_4:8004615-8004634 | Msa0147900:intron | 35.0% | |
AAATGCCTTAGGTTATACCT+CGG | + | chr1_4:8004731-8004750 | None:intergenic | 35.0% | |
AGTTGATCTATGAAAAACCC+TGG | + | chr1_4:8004771-8004790 | None:intergenic | 35.0% | |
AAAGGAAACAATGTTGGATC+AGG | - | chr1_4:8004830-8004849 | Msa0147900:intron | 35.0% | |
GTTCTTGGGACTATTAATGT+TGG | - | chr1_4:8004893-8004912 | Msa0147900:intron | 35.0% | |
TCTTGGGACTATTAATGTTG+GGG | - | chr1_4:8004895-8004914 | Msa0147900:intron | 35.0% | |
ACTATTAATGTTGGGGATCA+GGG | - | chr1_4:8004902-8004921 | Msa0147900:intron | 35.0% | |
GCATTTCTCAAGACATTACT+CGG | - | chr1_4:8004933-8004952 | Msa0147900:CDS | 35.0% | |
CATTTCTCAAGACATTACTC+GGG | - | chr1_4:8004934-8004953 | Msa0147900:CDS | 35.0% | |
TAATTCCGCACAAACTTCTT+CGG | - | chr1_4:8005160-8005179 | Msa0147900:CDS | 35.0% | |
ACGCAGACTAAAATCATAGA+TGG | + | chr1_4:8005296-8005315 | None:intergenic | 35.0% | |
! | AGATTATCCTTGAAAGTGCA+TGG | - | chr1_4:8005318-8005337 | Msa0147900:CDS | 35.0% |
AAATTGAAAGGACGAGTAGA+AGG | + | chr1_4:8005361-8005380 | None:intergenic | 35.0% | |
AAACATTTGTCCTCTTGAGT+CGG | - | chr1_4:8005680-8005699 | Msa0147900:intron | 35.0% | |
GTTGCACATATATTGCAGTA+TGG | + | chr1_4:8005726-8005745 | None:intergenic | 35.0% | |
! | AATGGATTCAGCTACAGTTA+AGG | + | chr1_4:8005750-8005769 | None:intergenic | 35.0% |
ATCTGAACAACATGAGGAAA+CGG | + | chr1_4:8005848-8005867 | None:intergenic | 35.0% | |
ATAGGAATCTGAACAACATG+AGG | + | chr1_4:8005854-8005873 | None:intergenic | 35.0% | |
TCATGTTGTTCAGATTCCTA+TGG | - | chr1_4:8005853-8005872 | Msa0147900:intron | 35.0% | |
ATTGAAAGAAGGAACAGGTA+TGG | + | chr1_4:8005888-8005907 | None:intergenic | 35.0% | |
ATTCCTACTGCATTGAAAGA+AGG | + | chr1_4:8005899-8005918 | None:intergenic | 35.0% | |
AATTGCCTTCCAATACACAA+GGG | - | chr1_4:8006196-8006215 | Msa0147900:intron | 35.0% | |
ATTATCCTAGGCAAGAATTC+TGG | + | chr1_4:8006397-8006416 | None:intergenic | 35.0% | |
TGAGAGAAAGAGTGAAAGAA+AGG | - | chr1_4:8006513-8006532 | Msa0147900:intron | 35.0% | |
GAGAGAAAGAGTGAAAGAAA+GGG | - | chr1_4:8006514-8006533 | Msa0147900:intron | 35.0% | |
ATACTTTGAGCATGCTTTGA+TGG | - | chr1_4:8006565-8006584 | Msa0147900:intron | 35.0% | |
GGTAGATTTCCATACATATG+AGG | + | chr1_4:8006666-8006685 | None:intergenic | 35.0% | |
!! | TCTACCACTTTTAGCAATGT+TGG | - | chr1_4:8006680-8006699 | Msa0147900:intron | 35.0% |
AAGTCCAACATTGCTAAAAG+TGG | + | chr1_4:8006687-8006706 | None:intergenic | 35.0% | |
! | TTTTCTGAATACCCTCTTGT+TGG | - | chr1_4:8006829-8006848 | Msa0147900:intron | 35.0% |
TTGCACCAACACATATATCA+GGG | + | chr1_4:8006890-8006909 | None:intergenic | 35.0% | |
ATTGCACCAACACATATATC+AGG | + | chr1_4:8006891-8006910 | None:intergenic | 35.0% | |
TTCGCAGTGTTAACATAGTT+CGG | + | chr1_4:8007221-8007240 | None:intergenic | 35.0% | |
AACTATGTTAACACTGCGAA+TGG | - | chr1_4:8007221-8007240 | Msa0147900:intron | 35.0% | |
ACTATGTTAACACTGCGAAT+GGG | - | chr1_4:8007222-8007241 | Msa0147900:intron | 35.0% | |
GATGGAGAAATATAAACTGC+TGG | + | chr1_4:8007363-8007382 | None:intergenic | 35.0% | |
GCAGTTTATATTTCTCCATC+AGG | - | chr1_4:8007363-8007382 | Msa0147900:CDS | 35.0% | |
TTCATCAAACAGCTTGACTA+GGG | + | chr1_4:8007622-8007641 | None:intergenic | 35.0% | |
TTTCATCAAACAGCTTGACT+AGG | + | chr1_4:8007623-8007642 | None:intergenic | 35.0% | |
GTTAAATTGTGCAACATGAG+CGG | - | chr1_4:8007643-8007662 | Msa0147900:CDS | 35.0% | |
TTAAATTGTGCAACATGAGC+GGG | - | chr1_4:8007644-8007663 | Msa0147900:CDS | 35.0% | |
TAAAAGGAATCTTCTCGACA+CGG | + | chr1_4:8007711-8007730 | None:intergenic | 35.0% | |
! | AGATATTGGTGACACATCTT+TGG | - | chr1_4:8007896-8007915 | Msa0147900:CDS | 35.0% |
TTGGTTGTGATTACGTTTAG+AGG | + | chr1_4:8007923-8007942 | None:intergenic | 35.0% | |
CCATGACAACACAAATAATG+GGG | + | chr1_4:8008030-8008049 | None:intergenic | 35.0% | |
CACCATGACAACACAAATAA+TGG | + | chr1_4:8008032-8008051 | None:intergenic | 35.0% | |
!!! | GCATGTAGAAGGATGTTTTT+TGG | - | chr1_4:8008053-8008072 | Msa0147900:CDS | 35.0% |
!!! | TGTAGAAGGATGTTTTTTGG+GGG | - | chr1_4:8008056-8008075 | Msa0147900:CDS | 35.0% |
CTACCTGATATTTGTACCTT+TGG | - | chr1_4:8008081-8008100 | Msa0147900:CDS | 35.0% | |
AGCATGAACATAGATGACAT+AGG | + | chr1_4:8008165-8008184 | None:intergenic | 35.0% | |
ATGTCATCTATGTTCATGCT+AGG | - | chr1_4:8008165-8008184 | Msa0147900:CDS | 35.0% | |
TGCTAGGAAACCAAAGTAAA+TGG | - | chr1_4:8008181-8008200 | Msa0147900:CDS | 35.0% | |
GCTAGGAAACCAAAGTAAAT+GGG | - | chr1_4:8008182-8008201 | Msa0147900:CDS | 35.0% | |
GATGCATAAGACAAAACTAG+TGG | + | chr1_4:8008283-8008302 | None:intergenic | 35.0% | |
TAAGGTAATGTTAGGATGCA+AGG | + | chr1_4:8008395-8008414 | None:intergenic | 35.0% | |
! | TTTAGATTCGGTTCTGTTGA+AGG | - | chr1_4:8008535-8008554 | Msa0147900:intron | 35.0% |
AGTTACACAGTGGAGATATA+GGG | + | chr1_4:8008618-8008637 | None:intergenic | 35.0% | |
TAGTTACACAGTGGAGATAT+AGG | + | chr1_4:8008619-8008638 | None:intergenic | 35.0% | |
GTTAGTTACAACTCCACTAA+CGG | + | chr1_4:8008652-8008671 | None:intergenic | 35.0% | |
AGGTTCTCTTTGAATTGGTT+AGG | + | chr1_4:8008801-8008820 | None:intergenic | 35.0% | |
GTCATAGGTTCTCTTTGAAT+TGG | + | chr1_4:8008806-8008825 | None:intergenic | 35.0% | |
GGATTATGTATACTGGTCAT+AGG | + | chr1_4:8008821-8008840 | None:intergenic | 35.0% | |
CCTCTTAGGATTATGTATAC+TGG | + | chr1_4:8008828-8008847 | None:intergenic | 35.0% | |
CCAGTATACATAATCCTAAG+AGG | - | chr1_4:8008825-8008844 | Msa0147900:intron | 35.0% | |
GTCATAGGTTCTCTATGAAT+CGG | + | chr1_4:8008899-8008918 | None:intergenic | 35.0% | |
TTAGTTTACCTAATCCTAGC+AGG | - | chr1_4:8008923-8008942 | Msa0147900:intron | 35.0% | |
ATGATATTAGTGTGTGGGTT+TGG | + | chr1_4:8009002-8009021 | None:intergenic | 35.0% | |
TCTCTTCCTAATACAACCAT+TGG | - | chr1_4:8009056-8009075 | Msa0147900:intron | 35.0% | |
CTCTTCCTAATACAACCATT+GGG | - | chr1_4:8009057-8009076 | Msa0147900:intron | 35.0% | |
! | TTAAACTTGTTCTCACCCAA+TGG | + | chr1_4:8009075-8009094 | None:intergenic | 35.0% |
TACAGAGACACAAAACATAG+TGG | + | chr1_4:8009130-8009149 | None:intergenic | 35.0% | |
AATCTAGATCATGGTTCTCT+GGG | - | chr1_4:8009212-8009231 | Msa0147900:intron | 35.0% | |
! | GAAGACTGTTGCATTTTTGA+TGG | - | chr1_4:8009283-8009302 | Msa0147900:intron | 35.0% |
GAAATTTGTCTTTATCTGCG+TGG | - | chr1_4:8009316-8009335 | Msa0147900:intron | 35.0% | |
ATGTGAATGTTTACGTTCCT+AGG | + | chr1_4:8009524-8009543 | None:intergenic | 35.0% | |
GTAAACATTCACATACATGC+TGG | - | chr1_4:8009530-8009549 | Msa0147900:intron | 35.0% | |
GCTGATATGACATTTCTAAC+AGG | + | chr1_4:8009741-8009760 | None:intergenic | 35.0% | |
TCAGCTAAAACAGATGACAA+TGG | + | chr1_4:8009858-8009877 | None:intergenic | 35.0% | |
!! | AACTCTGTTGGTAATATGCA+AGG | - | chr1_4:8009897-8009916 | Msa0147900:intron | 35.0% |
AAACTGTTCTGCATCCAATT+AGG | - | chr1_4:8010100-8010119 | Msa0147900:intron | 35.0% | |
TTGATTGCATTTGGCCTAAT+TGG | + | chr1_4:8010117-8010136 | None:intergenic | 35.0% | |
ATCTCTCTCATCATTACTAC+AGG | + | chr1_4:8010386-8010405 | None:intergenic | 35.0% | |
! | GATGCTATGTATTTTGCCAA+TGG | - | chr1_4:8010640-8010659 | Msa0147900:CDS | 35.0% |
! | TTGCCAATGGATTTGTTTGT+TGG | - | chr1_4:8010653-8010672 | Msa0147900:CDS | 35.0% |
! | TGCCAATGGATTTGTTTGTT+GGG | - | chr1_4:8010654-8010673 | Msa0147900:CDS | 35.0% |
CCTTGAGGACAAAATATGAA+GGG | + | chr1_4:8010806-8010825 | None:intergenic | 35.0% | |
TCCTTGAGGACAAAATATGA+AGG | + | chr1_4:8010807-8010826 | None:intergenic | 35.0% | |
GGATGAAATGGTTGAATGAT+TGG | - | chr1_4:8010973-8010992 | Msa0147900:intron | 35.0% | |
AAAATACCTCGCAAGGTTAA+AGG | - | chr1_4:8011017-8011036 | Msa0147900:intron | 35.0% | |
! | GTTCACCATTTTCTCTACAA+TGG | + | chr1_4:8011209-8011228 | None:intergenic | 35.0% |
AAATGGTGAACTATCGTCTT+AGG | - | chr1_4:8011218-8011237 | Msa0147900:intron | 35.0% | |
CACCTATAAATCTCTCTACA+TGG | + | chr1_4:8011281-8011300 | None:intergenic | 35.0% | |
ATAAATTCTTGCCATGTGTC+AGG | + | chr1_4:8011321-8011340 | None:intergenic | 35.0% | |
TGACACATGGCAAGAATTTA+TGG | - | chr1_4:8011320-8011339 | Msa0147900:intron | 35.0% | |
TAAACTGCACCTAGTGTAAA+AGG | - | chr1_4:8011362-8011381 | Msa0147900:intron | 35.0% | |
AAACTGCACCTAGTGTAAAA+GGG | - | chr1_4:8011363-8011382 | Msa0147900:intron | 35.0% | |
AACAGCTGAATGGCATATAA+GGG | + | chr1_4:8011425-8011444 | None:intergenic | 35.0% | |
AAACAGCTGAATGGCATATA+AGG | + | chr1_4:8011426-8011445 | None:intergenic | 35.0% | |
AACATAAATACGAGACTTCC+AGG | + | chr1_4:8011451-8011470 | None:intergenic | 35.0% | |
! | ATTTTGCCAGTTAGCATGAT+CGG | - | chr1_4:8011476-8011495 | Msa0147900:intron | 35.0% |
AAATTACCGATCATGCTAAC+TGG | + | chr1_4:8011485-8011504 | None:intergenic | 35.0% | |
CACAAATCACTGTTGAGAAA+GGG | + | chr1_4:8011713-8011732 | None:intergenic | 35.0% | |
! | CTTTCTCAACAGTGATTTGT+GGG | - | chr1_4:8011712-8011731 | Msa0147900:intron | 35.0% |
! | TTTCTCAACAGTGATTTGTG+GGG | - | chr1_4:8011713-8011732 | Msa0147900:intron | 35.0% |
TTTGTTCATTAGCAAAGCCT+TGG | - | chr1_4:8011999-8012018 | Msa0147900:CDS | 35.0% | |
GTTTCAAAACATGTTCACCA+AGG | + | chr1_4:8012019-8012038 | None:intergenic | 35.0% | |
TTGATTGATGAAAGAACTGG+AGG | + | chr1_4:8012186-8012205 | None:intergenic | 35.0% | |
!!! | TATATTTTGACCATCTGTCC+TGG | + | chr1_4:8012219-8012238 | None:intergenic | 35.0% |
AATATATTGCAAACACTCGG+GGG | - | chr1_4:8012233-8012252 | Msa0147900:intron | 35.0% | |
! | CTAAATAGTCCTGCTTTGAA+TGG | - | chr1_4:8012356-8012375 | Msa0147900:intron | 35.0% |
!! | CTTTGAATGGTTTGTTGGAA+GGG | - | chr1_4:8012369-8012388 | Msa0147900:intron | 35.0% |
GATATGGGGAATATGTTAAC+CGG | - | chr1_4:8012512-8012531 | Msa0147900:intron | 35.0% | |
! | TCAGAATTTTCATTCCCGTA+GGG | + | chr1_4:8012866-8012885 | None:intergenic | 35.0% |
! | ATCAGAATTTTCATTCCCGT+AGG | + | chr1_4:8012867-8012886 | None:intergenic | 35.0% |
TTCTGATAATCGAAGTTTGC+AGG | - | chr1_4:8012880-8012899 | Msa0147900:CDS | 35.0% | |
TAGAACAGTATGAGCTGAAA+AGG | + | chr1_4:8013009-8013028 | None:intergenic | 35.0% | |
TGAAAGTTTACAGTCCTAGA+GGG | + | chr1_4:8013131-8013150 | None:intergenic | 35.0% | |
! | ACTCATTTGTAGCACTTTTC+TGG | + | chr1_4:8013763-8013782 | None:intergenic | 35.0% |
! | AAAGTGCTACAAATGAGTGT+TGG | - | chr1_4:8013765-8013784 | Msa0147900:intron | 35.0% |
CCAAACCAATAAACCATTTG+GGG | + | chr1_4:8013800-8013819 | None:intergenic | 35.0% | |
! | AATTTTTGCGCATGAATTGG+AGG | + | chr1_4:8013830-8013849 | None:intergenic | 35.0% |
TTGTATCCAATGTTGGATTG+AGG | - | chr1_4:8013874-8013893 | Msa0147900:five_prime_UTR | 35.0% | |
TAATCACCTCAATCCAACAT+TGG | + | chr1_4:8013883-8013902 | None:intergenic | 35.0% | |
TGTTGGATTGAGGTGATTAA+TGG | - | chr1_4:8013884-8013903 | Msa0147900:five_prime_UTR | 35.0% | |
! | AATGAAAGCACAAGATGTAC+AGG | + | chr1_4:8013973-8013992 | None:intergenic | 35.0% |
!! | AGATTCTAGAGTCTTCGTTC+GGG | + | chr1_4:8003894-8003913 | None:intergenic | 40.0% |
AACAACAACACACCATACCA+TGG | - | chr1_4:8004144-8004163 | Msa0147900:CDS | 40.0% | |
!! | AAGATTGATTCGCCATGGTA+TGG | + | chr1_4:8004159-8004178 | None:intergenic | 40.0% |
! | ATGAGTCGTTGCTGATTAAC+AGG | + | chr1_4:8004458-8004477 | None:intergenic | 40.0% |
!! | CAGCAACGACTCATTTTTAG+AGG | - | chr1_4:8004464-8004483 | Msa0147900:intron | 40.0% |
GGATACGATAGTGAGAAAGA+AGG | + | chr1_4:8004511-8004530 | None:intergenic | 40.0% | |
GGATAAGGATTACAGTAACG+AGG | + | chr1_4:8004598-8004617 | None:intergenic | 40.0% | |
GCCATTCTCAACATCTTTAG+TGG | + | chr1_4:8004619-8004638 | None:intergenic | 40.0% | |
GAATGGCCATACATTGCATT+TGG | - | chr1_4:8004632-8004651 | Msa0147900:intron | 40.0% | |
AGTAACCGAGGTATAACCTA+AGG | - | chr1_4:8004723-8004742 | Msa0147900:intron | 40.0% | |
ATGAAAAACCCTGGATCGAA+CGG | + | chr1_4:8004762-8004781 | None:intergenic | 40.0% | |
TGTGTGAAATTTGCCCAACA+CGG | + | chr1_4:8004868-8004887 | None:intergenic | 40.0% | |
ATTTCACACAGTGTGGTTCT+TGG | - | chr1_4:8004878-8004897 | Msa0147900:intron | 40.0% | |
TTTCACACAGTGTGGTTCTT+GGG | - | chr1_4:8004879-8004898 | Msa0147900:intron | 40.0% | |
GACTATTAATGTTGGGGATC+AGG | - | chr1_4:8004901-8004920 | Msa0147900:intron | 40.0% | |
GAAGAAGTTTGTGCGGAATT+AGG | + | chr1_4:8005161-8005180 | None:intergenic | 40.0% | |
ACAATCACCATGCACTTTCA+AGG | + | chr1_4:8005328-8005347 | None:intergenic | 40.0% | |
!! | GTGCATGGTGATTGTTGTTT+AGG | - | chr1_4:8005333-8005352 | Msa0147900:CDS | 40.0% |
ACTACTAAACACAAACCAGC+TGG | + | chr1_4:8005440-8005459 | None:intergenic | 40.0% | |
!! | AGCTGGTTTGTGTTTAGTAG+TGG | - | chr1_4:8005439-8005458 | Msa0147900:CDS | 40.0% |
!! | ACAACATTTACCGACTCAAG+AGG | + | chr1_4:8005693-8005712 | None:intergenic | 40.0% |
GAAACTGAAGGAAATCAAGC+TGG | - | chr1_4:8005791-8005810 | Msa0147900:intron | 40.0% | |
AGGAAATCAAGCTGGAAATC+AGG | - | chr1_4:8005799-8005818 | Msa0147900:intron | 40.0% | |
ACTGCATTGAAAGAAGGAAC+AGG | + | chr1_4:8005893-8005912 | None:intergenic | 40.0% | |
GTTCCTTCTTTCAATGCAGT+AGG | - | chr1_4:8005893-8005912 | Msa0147900:intron | 40.0% | |
AGACAGTGTGTTGAGTGAAT+GGG | + | chr1_4:8006015-8006034 | None:intergenic | 40.0% | |
GTCTGTGTTCATAAATCGCA+TGG | - | chr1_4:8006031-8006050 | Msa0147900:intron | 40.0% | |
GAACATGCACTCTCTCAAAA+TGG | - | chr1_4:8006053-8006072 | Msa0147900:intron | 40.0% | |
GCACTCTCTCAAAATGGTAA+TGG | - | chr1_4:8006059-8006078 | Msa0147900:intron | 40.0% | |
GAATTGCCTTCCAATACACA+AGG | - | chr1_4:8006195-8006214 | Msa0147900:intron | 40.0% | |
TTCTGTACGATGCAATACAG+TGG | + | chr1_4:8006244-8006263 | None:intergenic | 40.0% | |
AGAAAGAGTGAAAGAAAGGG+AGG | - | chr1_4:8006517-8006536 | Msa0147900:intron | 40.0% | |
CAGAATGTGATGTATATGGG+TGG | + | chr1_4:8006769-8006788 | None:intergenic | 40.0% | |
GTGCCAGTTAAAGATCACAT+AGG | - | chr1_4:8006791-8006810 | Msa0147900:intron | 40.0% | |
ATATATCAGGGATGGAAAGC+AGG | + | chr1_4:8006878-8006897 | None:intergenic | 40.0% | |
TCCATCCCTGATATATGTGT+TGG | - | chr1_4:8006882-8006901 | Msa0147900:intron | 40.0% | |
ACCAACACATATATCAGGGA+TGG | + | chr1_4:8006886-8006905 | None:intergenic | 40.0% | |
! | AAGCACTTCTGTTTGAGACT+TGG | + | chr1_4:8006935-8006954 | None:intergenic | 40.0% |
!! | AGTCTCAAACAGAAGTGCTT+CGG | - | chr1_4:8006935-8006954 | Msa0147900:intron | 40.0% |
TTGTGACTCTAGCATATTGC+AGG | - | chr1_4:8007078-8007097 | Msa0147900:intron | 40.0% | |
CAGTCAGAGTCAGTACAAAT+AGG | - | chr1_4:8007153-8007172 | Msa0147900:intron | 40.0% | |
AGGAATTGCTATGCAGCATT+TGG | - | chr1_4:8007173-8007192 | Msa0147900:intron | 40.0% | |
GGAATTGCTATGCAGCATTT+GGG | - | chr1_4:8007174-8007193 | Msa0147900:intron | 40.0% | |
GCAGAATCTGTTGTTAATGC+TGG | - | chr1_4:8007336-8007355 | Msa0147900:CDS | 40.0% | |
ATTATAGGATTTGGCCCTGA+TGG | + | chr1_4:8007381-8007400 | None:intergenic | 40.0% | |
ATCAGGGCCAAATCCTATAA+TGG | - | chr1_4:8007380-8007399 | Msa0147900:CDS | 40.0% | |
ACCTGCACCATTATAGGATT+TGG | + | chr1_4:8007390-8007409 | None:intergenic | 40.0% | |
TGACAAACCTGCACCATTAT+AGG | + | chr1_4:8007396-8007415 | None:intergenic | 40.0% | |
! | GAGTTCTGATATGGTGTACA+TGG | - | chr1_4:8007745-8007764 | Msa0147900:intron | 40.0% |
!! | ACTATCAGTAGTTGATGGAC+TGG | + | chr1_4:8007947-8007966 | None:intergenic | 40.0% |
AGTCCATCAACTACTGATAG+TGG | - | chr1_4:8007946-8007965 | Msa0147900:CDS | 40.0% | |
CCCCATTATTTGTGTTGTCA+TGG | - | chr1_4:8008027-8008046 | Msa0147900:CDS | 40.0% | |
GCATAAGACAAAACTAGTGG+AGG | + | chr1_4:8008280-8008299 | None:intergenic | 40.0% | |
GACAAACAAGAAAAACAGGG+AGG | + | chr1_4:8008311-8008330 | None:intergenic | 40.0% | |
!! | AGGGAGGTTAAGTTGGTAAA+CGG | + | chr1_4:8008349-8008368 | None:intergenic | 40.0% |
GAACATTAGGGAGGTTAAGT+TGG | + | chr1_4:8008356-8008375 | None:intergenic | 40.0% | |
AATGTTAGGATGCAAGGAAG+AGG | + | chr1_4:8008389-8008408 | None:intergenic | 40.0% | |
AGTTCAGAATGGATGCATAG+AGG | + | chr1_4:8008492-8008511 | None:intergenic | 40.0% | |
CATAGCAGTTAGTTACACAG+TGG | + | chr1_4:8008628-8008647 | None:intergenic | 40.0% | |
AGGTTACTACTCTAAGCTGA+CGG | + | chr1_4:8008689-8008708 | None:intergenic | 40.0% | |
GAACACTCAATGAACCTCTT+AGG | + | chr1_4:8008842-8008861 | None:intergenic | 40.0% | |
ATGAATCGGTTAGGAATCAC+AGG | + | chr1_4:8008885-8008904 | None:intergenic | 40.0% | |
AGGTTCTCTATGAATCGGTT+AGG | + | chr1_4:8008894-8008913 | None:intergenic | 40.0% | |
TCAATGAACCTGCTAGGATT+AGG | + | chr1_4:8008934-8008953 | None:intergenic | 40.0% | |
TAATTCTAGACAACCGAACC+AGG | + | chr1_4:8009030-8009049 | None:intergenic | 40.0% | |
!! | TGGTTCGGTTGTCTAGAATT+AGG | - | chr1_4:8009029-8009048 | Msa0147900:intron | 40.0% |
TCTCACCCAATGGTTGTATT+AGG | + | chr1_4:8009065-8009084 | None:intergenic | 40.0% | |
! | ATGTTTTGTGTCTCTGTAGC+TGG | - | chr1_4:8009132-8009151 | Msa0147900:intron | 40.0% |
CAATCTAGATCATGGTTCTC+TGG | - | chr1_4:8009211-8009230 | Msa0147900:intron | 40.0% | |
ATCTAGATCATGGTTCTCTG+GGG | - | chr1_4:8009213-8009232 | Msa0147900:intron | 40.0% | |
! | GAGCTTGTTTGAAGTGGAAA+TGG | + | chr1_4:8009434-8009453 | None:intergenic | 40.0% |
! | AACAAGGAGCTTGTTTGAAG+TGG | + | chr1_4:8009440-8009459 | None:intergenic | 40.0% |
CTTCAAACAAGCTCCTTGTT+TGG | - | chr1_4:8009440-8009459 | Msa0147900:intron | 40.0% | |
TCTTCAACTCCTGCAACTTT+AGG | - | chr1_4:8009476-8009495 | Msa0147900:intron | 40.0% | |
TGAAACAATTGGTGCAAGAG+AGG | + | chr1_4:8009625-8009644 | None:intergenic | 40.0% | |
GCACCAATTGTTTCAGCAAT+TGG | - | chr1_4:8009630-8009649 | Msa0147900:intron | 40.0% | |
GAGCCAATTGCTGAAACAAT+TGG | + | chr1_4:8009636-8009655 | None:intergenic | 40.0% | |
!! | ATTGGCTCTAGACCAAACAA+TGG | - | chr1_4:8009648-8009667 | Msa0147900:intron | 40.0% |
!! | TTGGCTCTAGACCAAACAAT+GGG | - | chr1_4:8009649-8009668 | Msa0147900:intron | 40.0% |
AGATGACAATGGAGCTGAAT+CGG | + | chr1_4:8009847-8009866 | None:intergenic | 40.0% | |
TCACACCTTAGAAACTCTGT+TGG | - | chr1_4:8009885-8009904 | Msa0147900:intron | 40.0% | |
CTGTCAGAAGGAAATGATGA+AGG | + | chr1_4:8010007-8010026 | None:intergenic | 40.0% | |
TAGGCAAACTATCTGTCAGA+AGG | + | chr1_4:8010019-8010038 | None:intergenic | 40.0% | |
CCAAATGCAATCAACTAGCA+GGG | - | chr1_4:8010123-8010142 | Msa0147900:intron | 40.0% | |
TCATTTACCTGTTCAGGTCT+TGG | + | chr1_4:8010169-8010188 | None:intergenic | 40.0% | |
CTCTGTTCATTTACCTGTTC+AGG | + | chr1_4:8010175-8010194 | None:intergenic | 40.0% | |
AAATGAACAGAGAGATACCG+CGG | - | chr1_4:8010183-8010202 | Msa0147900:intron | 40.0% | |
! | TTCTGAAAGTGGAGTAGAGA+AGG | - | chr1_4:8010252-8010271 | Msa0147900:intron | 40.0% |
!!! | GGTTTTGATTGCCTCAGTTT+GGG | + | chr1_4:8010365-8010384 | None:intergenic | 40.0% |
!!! | AGGTTTTGATTGCCTCAGTT+TGG | + | chr1_4:8010366-8010385 | None:intergenic | 40.0% |
TTGTTCTAGTGGAGAAGCAA+CGG | - | chr1_4:8010456-8010475 | Msa0147900:CDS | 40.0% | |
ATGCTCCATCTTCAAGTGAA+AGG | - | chr1_4:8010500-8010519 | Msa0147900:intron | 40.0% | |
! | TATGAGTGGTTTAGAGCGTA+AGG | - | chr1_4:8010567-8010586 | Msa0147900:intron | 40.0% |
CTCCCAACAAACAAATCCAT+TGG | + | chr1_4:8010659-8010678 | None:intergenic | 40.0% | |
! | CAATGGATTTGTTTGTTGGG+AGG | - | chr1_4:8010657-8010676 | Msa0147900:CDS | 40.0% |
TTGTTGGGAGGTTATTTGCA+TGG | - | chr1_4:8010669-8010688 | Msa0147900:CDS | 40.0% | |
! | CCCTTCATATTTTGTCCTCA+AGG | - | chr1_4:8010803-8010822 | Msa0147900:intron | 40.0% |
CGGTCCATCATACAAATTGA+CGG | - | chr1_4:8010906-8010925 | Msa0147900:intron | 40.0% | |
GGTCCATCATACAAATTGAC+GGG | - | chr1_4:8010907-8010926 | Msa0147900:intron | 40.0% | |
GTCCATCATACAAATTGACG+GGG | - | chr1_4:8010908-8010927 | Msa0147900:intron | 40.0% | |
ATCATACGATTCAAATGGGG+TGG | - | chr1_4:8010952-8010971 | Msa0147900:intron | 40.0% | |
TTCAAATGGGGTGGATGAAA+TGG | - | chr1_4:8010961-8010980 | Msa0147900:intron | 40.0% | |
AAATGGTTGAATGATTGGGG+TGG | - | chr1_4:8010978-8010997 | Msa0147900:intron | 40.0% | |
AATGGTTGAATGATTGGGGT+GGG | - | chr1_4:8010979-8010998 | Msa0147900:intron | 40.0% | |
TAGGAGAAAAATACCTCGCA+AGG | - | chr1_4:8011010-8011029 | Msa0147900:intron | 40.0% | |
AATTGTCCTTTAACCTTGCG+AGG | + | chr1_4:8011026-8011045 | None:intergenic | 40.0% | |
TTGTATTTGGACCTGACACA+TGG | - | chr1_4:8011307-8011326 | Msa0147900:intron | 40.0% | |
TTCCAGGTTAAACAGCTGAA+TGG | + | chr1_4:8011435-8011454 | None:intergenic | 40.0% | |
AGATCTCTAGCTGACATGAT+AGG | - | chr1_4:8011593-8011612 | Msa0147900:CDS | 40.0% | |
ATGATCTGCTCTGCATGATT+AGG | - | chr1_4:8011667-8011686 | Msa0147900:intron | 40.0% | |
TGTTGAGAAAGGGTGGAATA+GGG | + | chr1_4:8011703-8011722 | None:intergenic | 40.0% | |
AAATCACTGTTGAGAAAGGG+TGG | + | chr1_4:8011710-8011729 | None:intergenic | 40.0% | |
CCACAAATCACTGTTGAGAA+AGG | + | chr1_4:8011714-8011733 | None:intergenic | 40.0% | |
CCTTTCTCAACAGTGATTTG+TGG | - | chr1_4:8011711-8011730 | Msa0147900:intron | 40.0% | |
AAGCATGATGTAAGGAGGAT+AGG | - | chr1_4:8011899-8011918 | Msa0147900:intron | 40.0% | |
AGGAACCTTATTGAACTGCA+TGG | - | chr1_4:8011919-8011938 | Msa0147900:CDS | 40.0% | |
ACACTCCATGCAGTTCAATA+AGG | + | chr1_4:8011927-8011946 | None:intergenic | 40.0% | |
TGTTGTGGTGCACACATTTA+TGG | + | chr1_4:8012119-8012138 | None:intergenic | 40.0% | |
TCAATCAAAGTCAGGAAACC+AGG | - | chr1_4:8012198-8012217 | Msa0147900:intron | 40.0% | |
! | TCCTGCTTTGAATGGTTTGT+TGG | - | chr1_4:8012364-8012383 | Msa0147900:intron | 40.0% |
TCCAACAAACCATTCAAAGC+AGG | + | chr1_4:8012368-8012387 | None:intergenic | 40.0% | |
!! | GCTTTGAATGGTTTGTTGGA+AGG | - | chr1_4:8012368-8012387 | Msa0147900:intron | 40.0% |
GATATGGGGAATATGCTAAC+TGG | - | chr1_4:8012710-8012729 | Msa0147900:intron | 40.0% | |
GAAAGTTTACAGTCCTAGAG+GGG | + | chr1_4:8013130-8013149 | None:intergenic | 40.0% | |
CTGAAAGTTTACAGTCCTAG+AGG | + | chr1_4:8013132-8013151 | None:intergenic | 40.0% | |
!! | CTCTAGGACTGTAAACTTTC+AGG | - | chr1_4:8013130-8013149 | Msa0147900:CDS | 40.0% |
ATGTAGAAGGGTCAGTTTAC+AGG | + | chr1_4:8013187-8013206 | None:intergenic | 40.0% | |
! | AAGGGCTTCTGATGATCTTT+TGG | - | chr1_4:8013450-8013469 | Msa0147900:intron | 40.0% |
TTGTGCCCCAAATGGTTTAT+TGG | - | chr1_4:8013792-8013811 | Msa0147900:intron | 40.0% | |
! | CCCCAAATGGTTTATTGGTT+TGG | - | chr1_4:8013797-8013816 | Msa0147900:intron | 40.0% |
! | TAATTGTGACTAGCTGACAG+TGG | - | chr1_4:8013929-8013948 | Msa0147900:five_prime_UTR | 40.0% |
ATTACAAGAGTGGTCGTCGA+GGG | + | chr1_4:8004043-8004062 | None:intergenic | 45.0% | |
AATTACAAGAGTGGTCGTCG+AGG | + | chr1_4:8004044-8004063 | None:intergenic | 45.0% | |
GCTAGTGCAAATAGTAACCG+AGG | - | chr1_4:8004711-8004730 | Msa0147900:intron | 45.0% | |
TGAAAAACCCTGGATCGAAC+GGG | + | chr1_4:8004761-8004780 | None:intergenic | 45.0% | |
TGGGCAAATTTCACACAGTG+TGG | - | chr1_4:8004871-8004890 | Msa0147900:intron | 45.0% | |
ATTAATGTTGGGGATCAGGG+TGG | - | chr1_4:8004905-8004924 | Msa0147900:intron | 45.0% | |
ACTGACCGAAGAAGTTTGTG+CGG | + | chr1_4:8005168-8005187 | None:intergenic | 45.0% | |
! | GGCATATCTTTTCCCCCTTT+TGG | - | chr1_4:8005555-8005574 | Msa0147900:CDS | 45.0% |
!!! | TCCATTTTTTAGGCTCCACC+TGG | - | chr1_4:8005764-8005783 | Msa0147900:intron | 45.0% |
!!! | CCATTTTTTAGGCTCCACCT+GGG | - | chr1_4:8005765-8005784 | Msa0147900:intron | 45.0% |
TTTCCTTCAGTTTCGTTCCC+AGG | + | chr1_4:8005785-8005804 | None:intergenic | 45.0% | |
GAACAACATGAGGAAACGGT+TGG | + | chr1_4:8005844-8005863 | None:intergenic | 45.0% | |
GGGGAATTGGCTGAAATGAT+GGG | + | chr1_4:8005995-8006014 | None:intergenic | 45.0% | |
TGGGGAATTGGCTGAAATGA+TGG | + | chr1_4:8005996-8006015 | None:intergenic | 45.0% | |
GTGTTGAGTGAATGGGGAAT+TGG | + | chr1_4:8006008-8006027 | None:intergenic | 45.0% | |
GACAGTGTGTTGAGTGAATG+GGG | + | chr1_4:8006014-8006033 | None:intergenic | 45.0% | |
CAGACAGTGTGTTGAGTGAA+TGG | + | chr1_4:8006016-8006035 | None:intergenic | 45.0% | |
TGTTGGCAACCCTTGTGTAT+TGG | + | chr1_4:8006208-8006227 | None:intergenic | 45.0% | |
GTGGTTAGTGCTTCAAGTGT+TGG | + | chr1_4:8006225-8006244 | None:intergenic | 45.0% | |
CGTACAGAACAGTTGCTTAG+TGG | - | chr1_4:8006255-8006274 | Msa0147900:intron | 45.0% | |
TCTGCTGATCTAGGTGTAAG+AGG | - | chr1_4:8007123-8007142 | Msa0147900:intron | 45.0% | |
GGTGCACTTCTACTTGAACT+GGG | - | chr1_4:8007195-8007214 | Msa0147900:intron | 45.0% | |
GCCAAATCCTATAATGGTGC+AGG | - | chr1_4:8007386-8007405 | Msa0147900:CDS | 45.0% | |
ACCACAAGTTGCTCATCGAA+TGG | - | chr1_4:8007821-8007840 | Msa0147900:intron | 45.0% | |
ACCATTCGATGAGCAACTTG+TGG | + | chr1_4:8007825-8007844 | None:intergenic | 45.0% | |
!! | CAGTAGTTGATGGACTGGAT+TGG | + | chr1_4:8007942-8007961 | None:intergenic | 45.0% |
ACGCCACTATCAGTAGTTGA+TGG | + | chr1_4:8007952-8007971 | None:intergenic | 45.0% | |
TGTCATGGTGTGCATGTAGA+AGG | - | chr1_4:8008042-8008061 | Msa0147900:CDS | 45.0% | |
AGGGGTGGTAAGGTAATGTT+AGG | + | chr1_4:8008403-8008422 | None:intergenic | 45.0% | |
ACAGTGGAGATATAGGGTGA+GGG | + | chr1_4:8008612-8008631 | None:intergenic | 45.0% | |
CTAACTGCTATGACCGTTAG+TGG | - | chr1_4:8008636-8008655 | Msa0147900:intron | 45.0% | |
GAACACTCAATGAACCTGCT+AGG | + | chr1_4:8008940-8008959 | None:intergenic | 45.0% | |
! | GCATCAACACAGGTTTTCTC+AGG | + | chr1_4:8008973-8008992 | None:intergenic | 45.0% |
TCTAGATCATGGTTCTCTGG+GGG | - | chr1_4:8009214-8009233 | Msa0147900:intron | 45.0% | |
! | CAAACAAGCTCCTTGTTTGG+CGG | - | chr1_4:8009443-8009462 | Msa0147900:intron | 45.0% |
GCAGGAGTTGAAGAAGAAAG+TGG | + | chr1_4:8009470-8009489 | None:intergenic | 45.0% | |
!! | TGGCTCTAGACCAAACAATG+GGG | - | chr1_4:8009650-8009669 | Msa0147900:intron | 45.0% |
TCTAGACCAAACAATGGGGA+AGG | - | chr1_4:8009654-8009673 | Msa0147900:intron | 45.0% | |
CTAGACCAAACAATGGGGAA+GGG | - | chr1_4:8009655-8009674 | Msa0147900:intron | 45.0% | |
GATGACAATGGAGCTGAATC+GGG | + | chr1_4:8009846-8009865 | None:intergenic | 45.0% | |
!! | CAGAGTTTCTAAGGTGTGAC+TGG | + | chr1_4:8009884-8009903 | None:intergenic | 45.0% |
! | GGAGACAGCACAATTTTGTC+AGG | - | chr1_4:8009918-8009937 | Msa0147900:intron | 45.0% |
! | GACAGCACAATTTTGTCAGG+TGG | - | chr1_4:8009921-8009940 | Msa0147900:intron | 45.0% |
GCCAAATGCAATCAACTAGC+AGG | - | chr1_4:8010122-8010141 | Msa0147900:intron | 45.0% | |
CCCTGCTAGTTGATTGCATT+TGG | + | chr1_4:8010126-8010145 | None:intergenic | 45.0% | |
ATCTGAACCAAGACCTGAAC+AGG | - | chr1_4:8010159-8010178 | Msa0147900:intron | 45.0% | |
! | TTCAGAAGTGCAACCAACTG+AGG | + | chr1_4:8010239-8010258 | None:intergenic | 45.0% |
! | GTTGGTTGCACTTCTGAAAG+TGG | - | chr1_4:8010241-8010260 | Msa0147900:intron | 45.0% |
AGTTTGGGTCTGGTTGTGAT+CGG | + | chr1_4:8010350-8010369 | None:intergenic | 45.0% | |
TCTCGCCTTTCACTTGAAGA+TGG | + | chr1_4:8010508-8010527 | None:intergenic | 45.0% | |
AAAACTGCTCCTCTTGGACT+GGG | - | chr1_4:8010544-8010563 | Msa0147900:intron | 45.0% | |
CTCCCCGTCAATTTGTATGA+TGG | + | chr1_4:8010913-8010932 | None:intergenic | 45.0% | |
CATCATACAAATTGACGGGG+AGG | - | chr1_4:8010911-8010930 | Msa0147900:intron | 45.0% | |
ATTGGGGTGGGATATGTGAT+AGG | - | chr1_4:8010991-8011010 | Msa0147900:intron | 45.0% | |
TGGTGAACTATCGTCTTAGG+TGG | - | chr1_4:8011221-8011240 | Msa0147900:intron | 45.0% | |
GGTGAACTATCGTCTTAGGT+GGG | - | chr1_4:8011222-8011241 | Msa0147900:intron | 45.0% | |
GTGAACTATCGTCTTAGGTG+GGG | - | chr1_4:8011223-8011242 | Msa0147900:intron | 45.0% | |
GCACCTAGTGTAAAAGGGTT+TGG | - | chr1_4:8011368-8011387 | Msa0147900:intron | 45.0% | |
! | ACGCCAAACCCTTTTACACT+AGG | + | chr1_4:8011374-8011393 | None:intergenic | 45.0% |
AGTGTAAAAGGGTTTGGCGT+TGG | - | chr1_4:8011374-8011393 | Msa0147900:intron | 45.0% | |
TGCCATTCAGCTGTTTAACC+TGG | - | chr1_4:8011430-8011449 | Msa0147900:intron | 45.0% | |
GAGCAGATCATGCAGCAAAA+GGG | + | chr1_4:8011658-8011677 | None:intergenic | 45.0% | |
AGAGCAGATCATGCAGCAAA+AGG | + | chr1_4:8011659-8011678 | None:intergenic | 45.0% | |
CTGTTGAGAAAGGGTGGAAT+AGG | + | chr1_4:8011704-8011723 | None:intergenic | 45.0% | |
TGTGGTGCACACATTTATGG+AGG | + | chr1_4:8012116-8012135 | None:intergenic | 45.0% | |
! | GGAAGGGTTTTCACAGCAAA+CGG | - | chr1_4:8012385-8012404 | Msa0147900:intron | 45.0% |
! | GAAGGGTTTTCACAGCAAAC+GGG | - | chr1_4:8012386-8012405 | Msa0147900:intron | 45.0% |
TTGACTCACCTGATGGCTTA+AGG | - | chr1_4:8012411-8012430 | Msa0147900:intron | 45.0% | |
AACATGCTCCTTAAGCCATC+AGG | + | chr1_4:8012422-8012441 | None:intergenic | 45.0% | |
TGACAGTGTTCATCATCTGC+GGG | + | chr1_4:8012463-8012482 | None:intergenic | 45.0% | |
CTGACAGTGTTCATCATCTG+CGG | + | chr1_4:8012464-8012483 | None:intergenic | 45.0% | |
GGGGAATATGTTAACCGGAA+CGG | - | chr1_4:8012517-8012536 | Msa0147900:intron | 45.0% | |
ATGTTAACCGGAACGGAAAG+AGG | - | chr1_4:8012524-8012543 | Msa0147900:intron | 45.0% | |
TGTTAACCGGAACGGAAAGA+GGG | - | chr1_4:8012525-8012544 | Msa0147900:intron | 45.0% | |
! | TCTGTTGAAGCATCCTTGAG+AGG | + | chr1_4:8012568-8012587 | None:intergenic | 45.0% |
CCAAGGGCTTGTGATACAAT+GGG | + | chr1_4:8012596-8012615 | None:intergenic | 45.0% | |
ACCAAGGGCTTGTGATACAA+TGG | + | chr1_4:8012597-8012616 | None:intergenic | 45.0% | |
ATTGTATCACAAGCCCTTGG+TGG | - | chr1_4:8012596-8012615 | Msa0147900:intron | 45.0% | |
TTGTATCACAAGCCCTTGGT+GGG | - | chr1_4:8012597-8012616 | Msa0147900:intron | 45.0% | |
TCTGTAGCAGAGAATAGTGG+TGG | + | chr1_4:8012632-8012651 | None:intergenic | 45.0% | |
GGTTCTGTAGCAGAGAATAG+TGG | + | chr1_4:8012635-8012654 | None:intergenic | 45.0% | |
ATGTTCATCTGTGGGCTTTC+TGG | + | chr1_4:8012656-8012675 | None:intergenic | 45.0% | |
AGAAAGCCCACAGATGAACA+TGG | - | chr1_4:8012655-8012674 | Msa0147900:CDS | 45.0% | |
! | CAGGTTGACAGTCAGGATAT+GGG | - | chr1_4:8012695-8012714 | Msa0147900:CDS | 45.0% |
AGGTTGACAGTCAGGATATG+GGG | - | chr1_4:8012696-8012715 | Msa0147900:CDS | 45.0% | |
GGGGAATATGCTAACTGGAA+CGG | - | chr1_4:8012715-8012734 | Msa0147900:intron | 45.0% | |
ATGCTAACTGGAACGGAAAC+AGG | - | chr1_4:8012722-8012741 | Msa0147900:intron | 45.0% | |
TGCTAACTGGAACGGAAACA+GGG | - | chr1_4:8012723-8012742 | Msa0147900:intron | 45.0% | |
!! | GGTTGGTTTACAGGACAAAC+AGG | + | chr1_4:8013109-8013128 | None:intergenic | 45.0% |
TCAGGCCTGTTTGACATAGT+TGG | - | chr1_4:8013148-8013167 | Msa0147900:CDS | 45.0% | |
GGTCAGTTTACAGGCTAAAC+AGG | + | chr1_4:8013178-8013197 | None:intergenic | 45.0% | |
GACTGTTTCCTTCTTTCTCC+AGG | - | chr1_4:8013327-8013346 | Msa0147900:CDS | 45.0% | |
AAGGTCAACCTGGAGAAAGA+AGG | + | chr1_4:8013338-8013357 | None:intergenic | 45.0% | |
ACAGCACGGAAGATATCTGT+AGG | + | chr1_4:8013397-8013416 | None:intergenic | 45.0% | |
! | CTGCATTTTCAGCTACAGCA+CGG | + | chr1_4:8013411-8013430 | None:intergenic | 45.0% |
GATGTAAGTAAGCTGCTCGA+AGG | - | chr1_4:8013652-8013671 | Msa0147900:exon | 45.0% | |
ACATCAAAGTATGACAGCGG+AGG | + | chr1_4:8013910-8013929 | None:intergenic | 45.0% | |
AGAAGAAGATCTGCGTGCGT+TGG | + | chr1_4:8003926-8003945 | None:intergenic | 50.0% | |
! | GCAGGAGTGTGTGTCTGATT+TGG | + | chr1_4:8004669-8004688 | None:intergenic | 50.0% |
TCAGACACACACTCCTGCTA+CGG | - | chr1_4:8004671-8004690 | Msa0147900:intron | 50.0% | |
AAAAACCCTGGATCGAACGG+GGG | + | chr1_4:8004759-8004778 | None:intergenic | 50.0% | |
GAAAAACCCTGGATCGAACG+GGG | + | chr1_4:8004760-8004779 | None:intergenic | 50.0% | |
TTCATTTGCAAATGGGGGCC+AGG | - | chr1_4:8005121-8005140 | Msa0147900:CDS | 50.0% | |
TCATTTGCAAATGGGGGCCA+GGG | - | chr1_4:8005122-8005141 | Msa0147900:CDS | 50.0% | |
!! | TAGGAGCATTCATTGTGCCC+TGG | + | chr1_4:8005142-8005161 | None:intergenic | 50.0% |
GCTGCAGTAACTATTCCAGC+TGG | - | chr1_4:8005422-8005441 | Msa0147900:CDS | 50.0% | |
CCCAGGTGGAGCCTAAAAAA+TGG | + | chr1_4:8005768-8005787 | None:intergenic | 50.0% | |
AAATCAGGCACCATCTGGAC+AGG | - | chr1_4:8005814-8005833 | Msa0147900:intron | 50.0% | |
GTTCAGATTCCTATGGCTGC+TGG | - | chr1_4:8005860-8005879 | Msa0147900:intron | 50.0% | |
ATTCTGCTCGTTGATCTCCC+AGG | + | chr1_4:8006179-8006198 | None:intergenic | 50.0% | |
GGCAACCCTTGTGTATTGGA+AGG | + | chr1_4:8006204-8006223 | None:intergenic | 50.0% | |
ACTGGCCAGAATTCTTGCCT+AGG | - | chr1_4:8006389-8006408 | Msa0147900:intron | 50.0% | |
CTAGCATATTGCAGGACGCA+TGG | - | chr1_4:8007086-8007105 | Msa0147900:intron | 50.0% | |
GAGGGAACTTCTGCTGATCT+AGG | - | chr1_4:8007114-8007133 | Msa0147900:intron | 50.0% | |
GGGTGCACTTCTACTTGAAC+TGG | - | chr1_4:8007194-8007213 | Msa0147900:intron | 50.0% | |
ACTGCGAATGGGACAGTCTT+CGG | - | chr1_4:8007233-8007252 | Msa0147900:intron | 50.0% | |
CAAACAGCTTGACTAGGGCA+AGG | + | chr1_4:8007617-8007636 | None:intergenic | 50.0% | |
AGGACAAGGCTGCACTTGAA+GGG | + | chr1_4:8008422-8008441 | None:intergenic | 50.0% | |
! | AGATTCTGGGAAGCATGCCA+CGG | + | chr1_4:8008453-8008472 | None:intergenic | 50.0% |
CTTCCCAGAATCTGCTTGCA+CGG | - | chr1_4:8008460-8008479 | Msa0147900:intron | 50.0% | |
CAGAATGGATGCATAGAGGC+AGG | + | chr1_4:8008488-8008507 | None:intergenic | 50.0% | |
AGCTCATGAGAGCTTGCCAT+AGG | - | chr1_4:8008582-8008601 | Msa0147900:intron | 50.0% | |
CACAGTGGAGATATAGGGTG+AGG | + | chr1_4:8008613-8008632 | None:intergenic | 50.0% | |
GAGTAGTAACCTGCTACTGC+AGG | - | chr1_4:8008697-8008716 | Msa0147900:intron | 50.0% | |
TTGGCGTCTAGCATCAACAC+AGG | + | chr1_4:8008983-8009002 | None:intergenic | 50.0% | |
GTGTCTCTGTAGCTGGATGT+CGG | - | chr1_4:8009139-8009158 | Msa0147900:intron | 50.0% | |
AGAAAGTGGACCGCCAAACA+AGG | + | chr1_4:8009456-8009475 | None:intergenic | 50.0% | |
!! | AGGAGCACTTCCAACACCAA+CGG | + | chr1_4:8009504-8009523 | None:intergenic | 50.0% |
!! | TTGGTGTTGGAAGTGCTCCT+AGG | - | chr1_4:8009504-8009523 | Msa0147900:intron | 50.0% |
CTTGTCCCTTCCCCATTGTT+TGG | + | chr1_4:8009663-8009682 | None:intergenic | 50.0% | |
CAAACAATGGGGAAGGGACA+AGG | - | chr1_4:8009661-8009680 | Msa0147900:intron | 50.0% | |
GAACCTGAATCACCAGAACC+GGG | + | chr1_4:8009705-8009724 | None:intergenic | 50.0% | |
CGAACCTGAATCACCAGAAC+CGG | + | chr1_4:8009706-8009725 | None:intergenic | 50.0% | |
! | CTGGTGATTCAGGTTCGACA+CGG | - | chr1_4:8009709-8009728 | Msa0147900:intron | 50.0% |
! | TGGTGATTCAGGTTCGACAC+GGG | - | chr1_4:8009710-8009729 | Msa0147900:intron | 50.0% |
ACTCTCCCATCTAACCCTTC+TGG | - | chr1_4:8009762-8009781 | Msa0147900:intron | 50.0% | |
CGATGCCAGAAGGGTTAGAT+GGG | + | chr1_4:8009770-8009789 | None:intergenic | 50.0% | |
CCATCTAACCCTTCTGGCAT+CGG | - | chr1_4:8009768-8009787 | Msa0147900:intron | 50.0% | |
ACTAGCAGGGACTTGTCTTC+TGG | - | chr1_4:8010136-8010155 | Msa0147900:intron | 50.0% | |
GCAACCAACTGAGGATACAC+CGG | + | chr1_4:8010230-8010249 | None:intergenic | 50.0% | |
TCACAACCAGACCCAAACTG+AGG | - | chr1_4:8010351-8010370 | Msa0147900:intron | 50.0% | |
TGATTGCCTCAGTTTGGGTC+TGG | + | chr1_4:8010360-8010379 | None:intergenic | 50.0% | |
! | CAGTCCAAGAGGAGCAGTTT+TGG | + | chr1_4:8010545-8010564 | None:intergenic | 50.0% |
CAAAACTGCTCCTCTTGGAC+TGG | - | chr1_4:8010543-8010562 | Msa0147900:intron | 50.0% | |
TATCGTCTTAGGTGGGGTGA+AGG | - | chr1_4:8011229-8011248 | Msa0147900:intron | 50.0% | |
ATCGTCTTAGGTGGGGTGAA+GGG | - | chr1_4:8011230-8011249 | Msa0147900:intron | 50.0% | |
!! | AAAGGGTTTGGCGTTGGTTG+TGG | - | chr1_4:8011380-8011399 | Msa0147900:intron | 50.0% |
!! | AAGGGTTTGGCGTTGGTTGT+GGG | - | chr1_4:8011381-8011400 | Msa0147900:intron | 50.0% |
TTTACTCCAGGGATGGCCAA+TGG | - | chr1_4:8011782-8011801 | Msa0147900:CDS | 50.0% | |
TTACTCCAGGGATGGCCAAT+GGG | - | chr1_4:8011783-8011802 | Msa0147900:CDS | 50.0% | |
! | GGAGGCAGAAGCATGATGTA+AGG | - | chr1_4:8011891-8011910 | Msa0147900:intron | 50.0% |
! | GGCAGAAGCATGATGTAAGG+AGG | - | chr1_4:8011894-8011913 | Msa0147900:intron | 50.0% |
TGGAGGATGAGTCGTGAATG+AGG | + | chr1_4:8012099-8012118 | None:intergenic | 50.0% | |
! | AGTCTGGTTCGTCTCTGTTG+TGG | + | chr1_4:8012134-8012153 | None:intergenic | 50.0% |
ACCAGACTCCAACCTCCTAA+AGG | - | chr1_4:8012146-8012165 | Msa0147900:intron | 50.0% | |
! | ACCTTTAGGAGGTTGGAGTC+TGG | + | chr1_4:8012150-8012169 | None:intergenic | 50.0% |
! | CATCAGCACCTTTAGGAGGT+TGG | + | chr1_4:8012157-8012176 | None:intergenic | 50.0% |
!! | CCTCCTAAAGGTGCTGATGA+CGG | - | chr1_4:8012158-8012177 | Msa0147900:intron | 50.0% |
GATCCGTCATCAGCACCTTT+AGG | + | chr1_4:8012164-8012183 | None:intergenic | 50.0% | |
AGTCAGGAAACCAGGACAGA+TGG | - | chr1_4:8012206-8012225 | Msa0147900:intron | 50.0% | |
TCAATCTGACTACCGCTGGT+GGG | + | chr1_4:8012311-8012330 | None:intergenic | 50.0% | |
ATCAATCTGACTACCGCTGG+TGG | + | chr1_4:8012312-8012331 | None:intergenic | 50.0% | |
CACATCAATCTGACTACCGC+TGG | + | chr1_4:8012315-8012334 | None:intergenic | 50.0% | |
CAGCGGTAGTCAGATTGATG+TGG | - | chr1_4:8012313-8012332 | Msa0147900:intron | 50.0% | |
CGGTAGTCAGATTGATGTGG+CGG | - | chr1_4:8012316-8012335 | Msa0147900:intron | 50.0% | |
GGTAGTCAGATTGATGTGGC+GGG | - | chr1_4:8012317-8012336 | Msa0147900:intron | 50.0% | |
!! | TGTGGCGGGTTTAATGTCTC+AGG | - | chr1_4:8012331-8012350 | Msa0147900:intron | 50.0% |
! | CAGGTTGGCAGTCAGGATAT+GGG | - | chr1_4:8012497-8012516 | Msa0147900:intron | 50.0% |
AGGTTGGCAGTCAGGATATG+GGG | - | chr1_4:8012498-8012517 | Msa0147900:intron | 50.0% | |
CCCATTGTATCACAAGCCCT+TGG | - | chr1_4:8012593-8012612 | Msa0147900:intron | 50.0% | |
TGTATCACAAGCCCTTGGTG+GGG | - | chr1_4:8012598-8012617 | Msa0147900:intron | 50.0% | |
GTAGCAGAGAATAGTGGTGG+AGG | + | chr1_4:8012629-8012648 | None:intergenic | 50.0% | |
GGCTGACCATGTTCATCTGT+GGG | + | chr1_4:8012664-8012683 | None:intergenic | 50.0% | |
ATCCTGACTGTCAACCTGCA+GGG | + | chr1_4:8012693-8012712 | None:intergenic | 50.0% | |
TATCCTGACTGTCAACCTGC+AGG | + | chr1_4:8012694-8012713 | None:intergenic | 50.0% | |
! | GCAGGTTGACAGTCAGGATA+TGG | - | chr1_4:8012694-8012713 | Msa0147900:CDS | 50.0% |
ATGCCCATGATACAAGCCCT+TGG | - | chr1_4:8012788-8012807 | Msa0147900:intron | 50.0% | |
CCTCCAAGGGCTTGTATCAT+GGG | + | chr1_4:8012794-8012813 | None:intergenic | 50.0% | |
CCATGATACAAGCCCTTGGA+GGG | - | chr1_4:8012792-8012811 | Msa0147900:intron | 50.0% | |
CATGATACAAGCCCTTGGAG+GGG | - | chr1_4:8012793-8012812 | Msa0147900:intron | 50.0% | |
ATGATACAAGCCCTTGGAGG+GGG | - | chr1_4:8012794-8012813 | Msa0147900:intron | 50.0% | |
TCTGCAGCAGAGAATAGTGG+TGG | + | chr1_4:8012827-8012846 | None:intergenic | 50.0% | |
TTTCATTCCCGTAGGGTGCA+CGG | + | chr1_4:8012859-8012878 | None:intergenic | 50.0% | |
GGTGAGCATTAGCTGCAAGT+TGG | - | chr1_4:8013079-8013098 | Msa0147900:intron | 50.0% | |
! | AGCATTAGCTGCAAGTTGGC+TGG | - | chr1_4:8013083-8013102 | Msa0147900:intron | 50.0% |
TCCTGTAAACCAACCCCTCT+AGG | - | chr1_4:8013114-8013133 | Msa0147900:CDS | 50.0% | |
!! | TCCTAGAGGGGTTGGTTTAC+AGG | + | chr1_4:8013118-8013137 | None:intergenic | 50.0% |
GTTTACAGTCCTAGAGGGGT+TGG | + | chr1_4:8013126-8013145 | None:intergenic | 50.0% | |
GCCTGTTTGACATAGTTGGC+TGG | - | chr1_4:8013152-8013171 | Msa0147900:CDS | 50.0% | |
GCCAGCCAACTATGTCAAAC+AGG | + | chr1_4:8013156-8013175 | None:intergenic | 50.0% | |
ACCTTCAACCAGTGGCTGAT+AGG | - | chr1_4:8013353-8013372 | Msa0147900:CDS | 50.0% | |
! | TCCTATCAGCCACTGGTTGA+AGG | + | chr1_4:8013357-8013376 | None:intergenic | 50.0% |
CGATCAATCCTATCAGCCAC+TGG | + | chr1_4:8013364-8013383 | None:intergenic | 50.0% | |
GCACGGAAGATATCTGTAGG+TGG | + | chr1_4:8013394-8013413 | None:intergenic | 50.0% | |
TGTTGCAACGAGAGTCTTGC+CGG | - | chr1_4:8013481-8013500 | Msa0147900:intron | 50.0% | |
AGTGGTCGTCGAGGGTAAAG+AGG | + | chr1_4:8004035-8004054 | None:intergenic | 55.0% | |
CAGACACACACTCCTGCTAC+GGG | - | chr1_4:8004672-8004691 | Msa0147900:intron | 55.0% | |
AGACACACACTCCTGCTACG+GGG | - | chr1_4:8004673-8004692 | Msa0147900:intron | 55.0% | |
TGCACTAGCTGTCTCACTGC+CGG | + | chr1_4:8004700-8004719 | None:intergenic | 55.0% | |
ATTTGCCCAACACGGCTACG+TGG | + | chr1_4:8004860-8004879 | None:intergenic | 55.0% | |
CCTTCAGTTTCGTTCCCAGG+TGG | + | chr1_4:8005782-8005801 | None:intergenic | 55.0% | |
CCACCTGGGAACGAAACTGA+AGG | - | chr1_4:8005779-8005798 | Msa0147900:intron | 55.0% | |
GCTGGAAATCAGGCACCATC+TGG | - | chr1_4:8005809-8005828 | Msa0147900:intron | 55.0% | |
GGTTGGAATGCCTGTCCAGA+TGG | + | chr1_4:8005827-8005846 | None:intergenic | 55.0% | |
CTGCACTTGAAGGGGTGGTA+AGG | + | chr1_4:8008413-8008432 | None:intergenic | 55.0% | |
GGACAAGGCTGCACTTGAAG+GGG | + | chr1_4:8008421-8008440 | None:intergenic | 55.0% | |
GAGGACAAGGCTGCACTTGA+AGG | + | chr1_4:8008423-8008442 | None:intergenic | 55.0% | |
! | CAAGTGCAGCCTTGTCCTCA+AGG | - | chr1_4:8008424-8008443 | Msa0147900:intron | 55.0% |
! | GATTCTGGGAAGCATGCCAC+GGG | + | chr1_4:8008452-8008471 | None:intergenic | 55.0% |
GCACCGTGCAAGCAGATTCT+GGG | + | chr1_4:8008466-8008485 | None:intergenic | 55.0% | |
ATAGGGTGAGGGAGGACCTA+TGG | + | chr1_4:8008601-8008620 | None:intergenic | 55.0% | |
GTGGAGATATAGGGTGAGGG+AGG | + | chr1_4:8008609-8008628 | None:intergenic | 55.0% | |
! | TGCTCTAGACCTGCAGTAGC+AGG | + | chr1_4:8008709-8008728 | None:intergenic | 55.0% |
ACTTTAGGCCCCGTTGGTGT+TGG | - | chr1_4:8009491-8009510 | Msa0147900:intron | 55.0% | |
GAGCACTTCCAACACCAACG+GGG | + | chr1_4:8009502-8009521 | None:intergenic | 55.0% | |
! | GGAGCACTTCCAACACCAAC+GGG | + | chr1_4:8009503-8009522 | None:intergenic | 55.0% |
!! | ATTGGTGCAAGAGAGGCACC+TGG | + | chr1_4:8009618-8009637 | None:intergenic | 55.0% |
ACTGAACACCGTAGTGAGCC+CGG | - | chr1_4:8009684-8009703 | Msa0147900:intron | 55.0% | |
! | GGTGATTCAGGTTCGACACG+GGG | - | chr1_4:8009711-8009730 | Msa0147900:intron | 55.0% |
CCGATGCCAGAAGGGTTAGA+TGG | + | chr1_4:8009771-8009790 | None:intergenic | 55.0% | |
ATCGGGTGGTAGCTGTGAAG+TGG | + | chr1_4:8009829-8009848 | None:intergenic | 55.0% | |
GACAATGGAGCTGAATCGGG+TGG | + | chr1_4:8009843-8009862 | None:intergenic | 55.0% | |
AGAGATACCGCGGAGATGAG+CGG | - | chr1_4:8010193-8010212 | Msa0147900:intron | 55.0% | |
GCTTCCGGTGTATCCTCAGT+TGG | - | chr1_4:8010223-8010242 | Msa0147900:intron | 55.0% | |
!! | CCAAGAGGAGCAGTTTTGGC+AGG | + | chr1_4:8010541-8010560 | None:intergenic | 55.0% |
CCTGCCAAAACTGCTCCTCT+TGG | - | chr1_4:8010538-8010557 | Msa0147900:intron | 55.0% | |
CCACTCATACCCAGTCCAAG+AGG | + | chr1_4:8010556-8010575 | None:intergenic | 55.0% | |
! | CCTCTTGGACTGGGTATGAG+TGG | - | chr1_4:8010553-8010572 | Msa0147900:intron | 55.0% |
!! | AGGGTTTGGCGTTGGTTGTG+GGG | - | chr1_4:8011382-8011401 | Msa0147900:intron | 55.0% |
! | CGTTGGTTGTGGGGATGACA+TGG | - | chr1_4:8011391-8011410 | Msa0147900:intron | 55.0% |
CCGTCATCAGCACCTTTAGG+AGG | + | chr1_4:8012161-8012180 | None:intergenic | 55.0% | |
TTGCAAACACTCGGGGGTCA+AGG | - | chr1_4:8012239-8012258 | Msa0147900:intron | 55.0% | |
! | ACGGGAGTTGACTCACCTGA+TGG | - | chr1_4:8012404-8012423 | Msa0147900:intron | 55.0% |
TGTCAGTCAGATTGCCCAGC+AGG | - | chr1_4:8012478-8012497 | Msa0147900:intron | 55.0% | |
AGTCAGATTGCCCAGCAGGT+TGG | - | chr1_4:8012482-8012501 | Msa0147900:intron | 55.0% | |
ATCCTGACTGCCAACCTGCT+GGG | + | chr1_4:8012495-8012514 | None:intergenic | 55.0% | |
TATCCTGACTGCCAACCTGC+TGG | + | chr1_4:8012496-8012515 | None:intergenic | 55.0% | |
! | GCAGGTTGGCAGTCAGGATA+TGG | - | chr1_4:8012496-8012515 | Msa0147900:intron | 55.0% |
GTATCACAAGCCCTTGGTGG+GGG | - | chr1_4:8012599-8012618 | Msa0147900:intron | 55.0% | |
TGGAGGATTTCCCCCACCAA+GGG | + | chr1_4:8012612-8012631 | None:intergenic | 55.0% | |
GGGCTGACCATGTTCATCTG+TGG | + | chr1_4:8012665-8012684 | None:intergenic | 55.0% | |
TGTCAACCTGCAGGGCAATC+GGG | + | chr1_4:8012685-8012704 | None:intergenic | 55.0% | |
CTGTCAACCTGCAGGGCAAT+CGG | + | chr1_4:8012686-8012705 | None:intergenic | 55.0% | |
AACTGGAACGGAAACAGGGC+AGG | - | chr1_4:8012727-8012746 | Msa0147900:intron | 55.0% | |
ACTGGAACGGAAACAGGGCA+GGG | - | chr1_4:8012728-8012747 | Msa0147900:intron | 55.0% | |
GTGGTGGTCTCGACTTCTCA+AGG | - | chr1_4:8012750-8012769 | Msa0147900:intron | 55.0% | |
CCCATGATACAAGCCCTTGG+AGG | - | chr1_4:8012791-8012810 | Msa0147900:intron | 55.0% | |
CCCTCCAAGGGCTTGTATCA+TGG | + | chr1_4:8012795-8012814 | None:intergenic | 55.0% | |
TGGAGGATTTCCCCCTCCAA+GGG | + | chr1_4:8012807-8012826 | None:intergenic | 55.0% | |
GCAGCAGAGAATAGTGGTGG+AGG | + | chr1_4:8012824-8012843 | None:intergenic | 55.0% | |
GGCTCTGCAGCAGAGAATAG+TGG | + | chr1_4:8012830-8012849 | None:intergenic | 55.0% | |
TTCATTCCCGTAGGGTGCAC+GGG | + | chr1_4:8012858-8012877 | None:intergenic | 55.0% | |
! | CCACTGGTTGAAGGTCAACC+TGG | + | chr1_4:8013348-8013367 | None:intergenic | 55.0% |
! | CCAGGTTGACCTTCAACCAG+TGG | - | chr1_4:8013345-8013364 | Msa0147900:CDS | 55.0% |
ATGCAGTCCAGCTGTCTAGC+AGG | - | chr1_4:8013425-8013444 | Msa0147900:intron | 55.0% | |
TGCAGTCCAGCTGTCTAGCA+GGG | - | chr1_4:8013426-8013445 | Msa0147900:intron | 55.0% | |
TCCAGCTGTCTAGCAGGGAA+AGG | - | chr1_4:8013431-8013450 | Msa0147900:intron | 55.0% | |
CCAGCTGTCTAGCAGGGAAA+GGG | - | chr1_4:8013432-8013451 | Msa0147900:intron | 55.0% | |
AAGCTGCTCGAAGGACGTTC+TGG | - | chr1_4:8013661-8013680 | Msa0147900:exon | 55.0% | |
AGCTGCTCGAAGGACGTTCT+GGG | - | chr1_4:8013662-8013681 | Msa0147900:exon | 55.0% | |
TTGGCGTGTTGTGCCCCAAA+TGG | - | chr1_4:8013784-8013803 | Msa0147900:intron | 55.0% | |
! | CGGGGGAGTGCAAATGCCTT+AGG | + | chr1_4:8004742-8004761 | None:intergenic | 60.0% |
GAGCTCCACGTAGCCGTGTT+GGG | - | chr1_4:8004852-8004871 | Msa0147900:intron | 60.0% | |
GTTGGGGATCAGGGTGGTGA+AGG | - | chr1_4:8004911-8004930 | Msa0147900:intron | 60.0% | |
GGTATGGCTCCAGCAGCCAT+AGG | + | chr1_4:8005872-8005891 | None:intergenic | 60.0% | |
CAAGGCTGCACTTGAAGGGG+TGG | + | chr1_4:8008418-8008437 | None:intergenic | 60.0% | |
CCACGGGTACCTTGAGGACA+AGG | + | chr1_4:8008436-8008455 | None:intergenic | 60.0% | |
! | CCTTGTCCTCAAGGTACCCG+TGG | - | chr1_4:8008433-8008452 | Msa0147900:intron | 60.0% |
AGCATGCCACGGGTACCTTG+AGG | + | chr1_4:8008442-8008461 | None:intergenic | 60.0% | |
GGCACCGTGCAAGCAGATTC+TGG | + | chr1_4:8008467-8008486 | None:intergenic | 60.0% | |
CCAACGGGGCCTAAAGTTGC+AGG | + | chr1_4:8009488-8009507 | None:intergenic | 60.0% | |
CCTGCAACTTTAGGCCCCGT+TGG | - | chr1_4:8009485-8009504 | Msa0147900:intron | 60.0% | |
CACCAGAACCGGGCTCACTA+CGG | + | chr1_4:8009695-8009714 | None:intergenic | 60.0% | |
! | GAGCCCGGTTCTGGTGATTC+AGG | - | chr1_4:8009699-8009718 | Msa0147900:intron | 60.0% |
CAGCAGCTCCGATGCCAGAA+GGG | + | chr1_4:8009779-8009798 | None:intergenic | 60.0% | |
GCTGCTGGCAGCACATCAAC+TGG | - | chr1_4:8009792-8009811 | Msa0147900:intron | 60.0% | |
TGTCTCCCATTGGCCATCCC+TGG | + | chr1_4:8011791-8011810 | None:intergenic | 60.0% | |
! | TGACTACCGCTGGTGGGCAA+GGG | + | chr1_4:8012305-8012324 | None:intergenic | 60.0% |
CCTCTGCCCTCTTTCCGTTC+CGG | + | chr1_4:8012534-8012553 | None:intergenic | 60.0% | |
CGGAACGGAAAGAGGGCAGA+GGG | - | chr1_4:8012532-8012551 | Msa0147900:intron | 60.0% | |
GGAACGGAAAGAGGGCAGAG+GGG | - | chr1_4:8012533-8012552 | Msa0147900:intron | 60.0% | |
!! | GGGGTGGTGTTGACCTCTCA+AGG | - | chr1_4:8012552-8012571 | Msa0147900:intron | 60.0% |
GTGGAGGATTTCCCCCACCA+AGG | + | chr1_4:8012613-8012632 | None:intergenic | 60.0% | |
! | TGCCCTGCAGGTTGACAGTC+AGG | - | chr1_4:8012688-8012707 | Msa0147900:CDS | 60.0% |
GTGGAGGATTTCCCCCTCCA+AGG | + | chr1_4:8012808-8012827 | None:intergenic | 60.0% | |
CCAGAAACCCGTGCACCCTA+CGG | - | chr1_4:8012848-8012867 | Msa0147900:intron | 60.0% | |
CAGAAACCCGTGCACCCTAC+GGG | - | chr1_4:8012849-8012868 | Msa0147900:intron | 60.0% | |
CCCTTTCCCTGCTAGACAGC+TGG | + | chr1_4:8013435-8013454 | None:intergenic | 60.0% | |
! | TGCTCGAAGGACGTTCTGGG+AGG | - | chr1_4:8013665-8013684 | Msa0147900:exon | 60.0% |
!! | GCTCGAAGGACGTTCTGGGA+GGG | - | chr1_4:8013666-8013685 | Msa0147900:five_prime_UTR | 60.0% |
CACACTCCTGCTACGGGGTC+CGG | - | chr1_4:8004678-8004697 | Msa0147900:intron | 65.0% | |
TGCACTCCCCCGTTCGATCC+AGG | - | chr1_4:8004750-8004769 | Msa0147900:intron | 65.0% | |
GCACTCCCCCGTTCGATCCA+GGG | - | chr1_4:8004751-8004770 | Msa0147900:intron | 65.0% | |
GGAGCTCCACGTAGCCGTGT+TGG | - | chr1_4:8004851-8004870 | Msa0147900:intron | 65.0% | |
TGCAGGACGCATGGAGCGAG+AGG | - | chr1_4:8007095-8007114 | Msa0147900:intron | 65.0% | |
GCAGGACGCATGGAGCGAGA+GGG | - | chr1_4:8007096-8007115 | Msa0147900:intron | 65.0% | |
!! | GTGCAAGAGAGGCACCTGGC+AGG | + | chr1_4:8009614-8009633 | None:intergenic | 65.0% |
CACCGTAGTGAGCCCGGTTC+TGG | - | chr1_4:8009690-8009709 | Msa0147900:intron | 65.0% | |
CCAGCAGCTCCGATGCCAGA+AGG | + | chr1_4:8009780-8009799 | None:intergenic | 65.0% | |
! | CCTTCTGGCATCGGAGCTGC+TGG | - | chr1_4:8009777-8009796 | Msa0147900:intron | 65.0% |
ATGAGCGGACGTGGGGCTTC+CGG | - | chr1_4:8010208-8010227 | Msa0147900:intron | 65.0% | |
GGTGGGGTGAAGGGAGACCA+AGG | - | chr1_4:8011239-8011258 | Msa0147900:intron | 65.0% | |
! | CTGACTACCGCTGGTGGGCA+AGG | + | chr1_4:8012306-8012325 | None:intergenic | 65.0% |
! | TGCCCAGCAGGTTGGCAGTC+AGG | - | chr1_4:8012490-8012509 | Msa0147900:intron | 65.0% |
CCGGAACGGAAAGAGGGCAG+AGG | - | chr1_4:8012531-8012550 | Msa0147900:intron | 65.0% | |
ACGGAAAGAGGGCAGAGGGG+TGG | - | chr1_4:8012536-8012555 | Msa0147900:intron | 65.0% | |
GGAACGGAAACAGGGCAGGG+TGG | - | chr1_4:8012731-8012750 | Msa0147900:intron | 65.0% | |
ACGGAAACAGGGCAGGGTGG+TGG | - | chr1_4:8012734-8012753 | Msa0147900:intron | 65.0% | |
CCGTAGGGTGCACGGGTTTC+TGG | + | chr1_4:8012851-8012870 | None:intergenic | 65.0% | |
TCACTGCCGGACCCCGTAGC+AGG | + | chr1_4:8004687-8004706 | None:intergenic | 70.0% | |
ACCGCGGAGATGAGCGGACG+TGG | - | chr1_4:8010199-8010218 | Msa0147900:intron | 70.0% | |
CCCACGTCCGCTCATCTCCG+CGG | + | chr1_4:8010203-8010222 | None:intergenic | 70.0% | |
CCGCGGAGATGAGCGGACGT+GGG | - | chr1_4:8010200-8010219 | Msa0147900:intron | 70.0% | |
CGCGGAGATGAGCGGACGTG+GGG | - | chr1_4:8010201-8010220 | Msa0147900:intron | 70.0% | |
! | CTGGTGGGCAAGGGTCGCTG+AGG | + | chr1_4:8012296-8012315 | None:intergenic | 70.0% |
CAGCGACCCTTGCCCACCAG+CGG | - | chr1_4:8012296-8012315 | Msa0147900:intron | 70.0% | |
GGTCAGCCCGATTGCCCTGC+AGG | - | chr1_4:8012676-8012695 | Msa0147900:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 8003805 | 8014023 | 8003805 | ID=Msa0147900;Name=Msa0147900 |
chr1_4 | mRNA | 8003805 | 8014023 | 8003805 | ID=Msa0147900-mRNA-1;Parent=Msa0147900;Name=Msa0147900-mRNA-1;_AED=0.08;_eAED=0.08;_QI=246|0.94|0.94|1|0.94|0.88|18|324|989 |
chr1_4 | exon | 8003805 | 8004200 | 8003805 | ID=Msa0147900-mRNA-1:exon:3467;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8004324 | 8004479 | 8004324 | ID=Msa0147900-mRNA-1:exon:3466;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8004927 | 8005688 | 8004927 | ID=Msa0147900-mRNA-1:exon:3465;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8007240 | 8007467 | 8007240 | ID=Msa0147900-mRNA-1:exon:3464;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8007555 | 8007706 | 8007555 | ID=Msa0147900-mRNA-1:exon:3463;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8007886 | 8008209 | 8007886 | ID=Msa0147900-mRNA-1:exon:3462;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8008277 | 8008397 | 8008277 | ID=Msa0147900-mRNA-1:exon:3461;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8010421 | 8010492 | 8010421 | ID=Msa0147900-mRNA-1:exon:3460;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8010574 | 8010738 | 8010574 | ID=Msa0147900-mRNA-1:exon:3459;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8011529 | 8011680 | 8011529 | ID=Msa0147900-mRNA-1:exon:3458;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8011754 | 8011823 | 8011754 | ID=Msa0147900-mRNA-1:exon:3457;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8011918 | 8012052 | 8011918 | ID=Msa0147900-mRNA-1:exon:3456;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8012647 | 8012727 | 8012647 | ID=Msa0147900-mRNA-1:exon:3455;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8012873 | 8012994 | 8012873 | ID=Msa0147900-mRNA-1:exon:3454;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8013096 | 8013203 | 8013096 | ID=Msa0147900-mRNA-1:exon:3453;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8013304 | 8013421 | 8013304 | ID=Msa0147900-mRNA-1:exon:3452;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8013534 | 8013695 | 8013534 | ID=Msa0147900-mRNA-1:exon:3451;Parent=Msa0147900-mRNA-1 |
chr1_4 | exon | 8013808 | 8014023 | 8013808 | ID=Msa0147900-mRNA-1:exon:3450;Parent=Msa0147900-mRNA-1 |
chr1_4 | five_prime_UTR | 8013808 | 8014023 | 8013808 | ID=Msa0147900-mRNA-1:five_prime_utr;Parent=Msa0147900-mRNA-1 |
chr1_4 | five_prime_UTR | 8013666 | 8013695 | 8013666 | ID=Msa0147900-mRNA-1:five_prime_utr;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8013534 | 8013665 | 8013534 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8013304 | 8013421 | 8013304 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8013096 | 8013203 | 8013096 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8012873 | 8012994 | 8012873 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8012647 | 8012727 | 8012647 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8011918 | 8012052 | 8011918 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8011754 | 8011823 | 8011754 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8011529 | 8011680 | 8011529 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8010574 | 8010738 | 8010574 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8010421 | 8010492 | 8010421 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8008277 | 8008397 | 8008277 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8007886 | 8008209 | 8007886 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8007555 | 8007706 | 8007555 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8007240 | 8007467 | 8007240 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8004927 | 8005688 | 8004927 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8004324 | 8004479 | 8004324 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | CDS | 8004129 | 8004200 | 8004129 | ID=Msa0147900-mRNA-1:cds;Parent=Msa0147900-mRNA-1 |
chr1_4 | three_prime_UTR | 8003805 | 8004128 | 8003805 | ID=Msa0147900-mRNA-1:three_prime_utr;Parent=Msa0147900-mRNA-1 |
Gene Sequence |
Protein sequence |