Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149750 | sp|Q3EBZ2|SKI23_ARATH | 32.108 | 408 | 213 | 17 | 98 | 460 | 2 | 390 | 2.79e-37 | 144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149750 | G7I272 | 69.689 | 386 | 100 | 6 | 86 | 462 | 10 | 387 | 3.12e-179 | 516 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0149750 | Msa0149810 | 0.860060 | 2.686466e-63 | -8.615850e-47 |
Msa0149750 | Msa0621240 | 0.803100 | 4.095494e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149750 | MtrunA17_Chr1g0146401 | 69.689 | 386 | 100 | 6 | 86 | 462 | 10 | 387 | 0.0 | 516 |
Msa0149750 | MtrunA17_Chr1g0157711 | 65.067 | 375 | 111 | 9 | 94 | 460 | 1 | 363 | 2.23e-153 | 440 |
Msa0149750 | MtrunA17_Chr3g0088751 | 51.928 | 389 | 146 | 12 | 96 | 460 | 2 | 373 | 6.73e-120 | 355 |
Msa0149750 | MtrunA17_Chr6g0457501 | 51.407 | 391 | 157 | 12 | 94 | 461 | 1 | 381 | 1.70e-116 | 348 |
Msa0149750 | MtrunA17_Chr2g0303111 | 50.769 | 390 | 150 | 11 | 94 | 462 | 1 | 369 | 9.72e-115 | 342 |
Msa0149750 | MtrunA17_Chr6g0457531 | 51.969 | 381 | 146 | 11 | 98 | 460 | 4 | 365 | 1.41e-113 | 338 |
Msa0149750 | MtrunA17_Chr3g0088841 | 50.255 | 392 | 144 | 14 | 98 | 462 | 6 | 373 | 9.22e-108 | 324 |
Msa0149750 | MtrunA17_Chr6g0460451 | 48.843 | 389 | 158 | 14 | 98 | 461 | 4 | 376 | 6.36e-105 | 317 |
Msa0149750 | MtrunA17_Chr6g0457541 | 50.386 | 389 | 143 | 14 | 98 | 460 | 4 | 368 | 7.39e-104 | 314 |
Msa0149750 | MtrunA17_Chr6g0460421 | 48.072 | 389 | 161 | 14 | 98 | 461 | 4 | 376 | 4.01e-103 | 312 |
Msa0149750 | MtrunA17_Chr3g0088951 | 48.564 | 383 | 153 | 12 | 97 | 462 | 3 | 358 | 2.32e-101 | 307 |
Msa0149750 | MtrunA17_Chr3g0089001 | 48.454 | 388 | 154 | 14 | 89 | 460 | 26 | 383 | 1.20e-100 | 306 |
Msa0149750 | MtrunA17_Chr3g0088931 | 50.578 | 346 | 135 | 9 | 97 | 425 | 3 | 329 | 2.34e-97 | 297 |
Msa0149750 | MtrunA17_Chr3g0088551 | 44.988 | 409 | 170 | 13 | 96 | 462 | 2 | 397 | 2.83e-95 | 293 |
Msa0149750 | MtrunA17_Chr3g0088631 | 44.776 | 402 | 167 | 14 | 98 | 462 | 4 | 387 | 8.02e-95 | 291 |
Msa0149750 | MtrunA17_Chr3g0088601 | 44.686 | 414 | 176 | 13 | 85 | 462 | 3 | 399 | 8.54e-93 | 286 |
Msa0149750 | MtrunA17_Chr3g0088721 | 43.142 | 401 | 174 | 12 | 93 | 462 | 3 | 380 | 1.20e-92 | 285 |
Msa0149750 | MtrunA17_Chr3g0127321 | 45.433 | 416 | 166 | 19 | 93 | 462 | 28 | 428 | 1.77e-90 | 282 |
Msa0149750 | MtrunA17_Chr3g0088921 | 42.755 | 421 | 163 | 16 | 94 | 462 | 1 | 395 | 7.61e-88 | 273 |
Msa0149750 | MtrunA17_Chr3g0127311 | 43.108 | 399 | 184 | 14 | 94 | 462 | 2 | 387 | 2.08e-87 | 273 |
Msa0149750 | MtrunA17_Chr1g0151721 | 44.032 | 377 | 152 | 9 | 96 | 460 | 18 | 347 | 1.68e-85 | 266 |
Msa0149750 | MtrunA17_Chr1g0170781 | 41.855 | 399 | 188 | 15 | 92 | 460 | 12 | 396 | 6.84e-84 | 263 |
Msa0149750 | MtrunA17_Chr3g0088671 | 42.820 | 383 | 171 | 12 | 98 | 462 | 4 | 356 | 2.45e-81 | 255 |
Msa0149750 | MtrunA17_Chr3g0088991 | 43.081 | 383 | 158 | 16 | 94 | 460 | 1 | 339 | 7.60e-80 | 251 |
Msa0149750 | MtrunA17_Chr3g0088621 | 39.604 | 404 | 182 | 13 | 95 | 460 | 12 | 391 | 3.02e-79 | 251 |
Msa0149750 | MtrunA17_Chr3g0088741 | 42.308 | 390 | 175 | 16 | 98 | 462 | 4 | 368 | 2.53e-77 | 245 |
Msa0149750 | MtrunA17_Chr1g0146371 | 64.249 | 193 | 38 | 2 | 264 | 455 | 5 | 167 | 8.02e-76 | 234 |
Msa0149750 | MtrunA17_Chr3g0088541 | 41.388 | 389 | 166 | 12 | 98 | 457 | 3 | 358 | 1.42e-75 | 241 |
Msa0149750 | MtrunA17_Chr3g0088531 | 40.678 | 413 | 157 | 16 | 98 | 462 | 2 | 374 | 3.17e-74 | 238 |
Msa0149750 | MtrunA17_Chr3g0088831 | 39.344 | 427 | 184 | 14 | 93 | 460 | 10 | 420 | 9.44e-73 | 235 |
Msa0149750 | MtrunA17_Chr3g0088641 | 41.344 | 387 | 173 | 18 | 98 | 462 | 3 | 357 | 3.51e-72 | 232 |
Msa0149750 | MtrunA17_Chr3g0089051 | 40.152 | 396 | 176 | 16 | 96 | 455 | 55 | 425 | 1.04e-67 | 223 |
Msa0149750 | MtrunA17_Chr3g0089041 | 40.554 | 397 | 181 | 18 | 97 | 462 | 2 | 374 | 3.05e-66 | 217 |
Msa0149750 | MtrunA17_Chr3g0096401 | 41.147 | 401 | 173 | 17 | 74 | 460 | 8 | 359 | 2.75e-63 | 209 |
Msa0149750 | MtrunA17_Chr5g0417881 | 58.791 | 182 | 60 | 5 | 279 | 451 | 13 | 188 | 1.07e-58 | 191 |
Msa0149750 | MtrunA17_Chr7g0214521 | 38.693 | 398 | 174 | 17 | 95 | 462 | 8 | 365 | 1.25e-56 | 191 |
Msa0149750 | MtrunA17_Chr3g0088561 | 55.682 | 176 | 70 | 3 | 293 | 462 | 1 | 174 | 3.57e-56 | 184 |
Msa0149750 | MtrunA17_Chr3g0088701 | 36.802 | 394 | 157 | 14 | 93 | 462 | 3 | 328 | 4.51e-54 | 184 |
Msa0149750 | MtrunA17_Chr3g0088661 | 36.548 | 394 | 158 | 14 | 93 | 462 | 3 | 328 | 1.08e-52 | 180 |
Msa0149750 | MtrunA17_Chr8g0392121 | 49.171 | 181 | 78 | 6 | 290 | 462 | 1 | 175 | 3.58e-44 | 153 |
Msa0149750 | MtrunA17_Chr6g0457511 | 66.667 | 117 | 33 | 2 | 293 | 406 | 1 | 114 | 4.73e-43 | 147 |
Msa0149750 | MtrunA17_Chr1g0151701 | 48.913 | 184 | 76 | 6 | 293 | 462 | 1 | 180 | 6.29e-43 | 149 |
Msa0149750 | MtrunA17_Chr1g0146331 | 80.000 | 100 | 3 | 2 | 1 | 83 | 1 | 100 | 6.36e-41 | 152 |
Msa0149750 | MtrunA17_Chr3g0088571 | 54.037 | 161 | 49 | 6 | 98 | 237 | 4 | 160 | 2.92e-40 | 142 |
Msa0149750 | MtrunA17_Chr3g0088581 | 41.981 | 212 | 103 | 7 | 260 | 460 | 3 | 205 | 3.82e-39 | 140 |
Msa0149750 | MtrunA17_Chr3g0088711 | 45.263 | 190 | 85 | 6 | 276 | 462 | 11 | 184 | 1.90e-38 | 138 |
Msa0149750 | MtrunA17_Chr3g0092331 | 47.778 | 180 | 72 | 5 | 299 | 460 | 5 | 180 | 2.77e-38 | 137 |
Msa0149750 | MtrunA17_Chr3g0088681 | 46.961 | 181 | 71 | 7 | 293 | 462 | 1 | 167 | 5.91e-38 | 136 |
Msa0149750 | MtrunA17_Chr1g0146391 | 73.034 | 89 | 9 | 1 | 10 | 83 | 4 | 92 | 4.86e-34 | 133 |
Msa0149750 | MtrunA17_Chr8g0371031 | 29.351 | 385 | 209 | 14 | 94 | 443 | 20 | 376 | 6.66e-34 | 131 |
Msa0149750 | MtrunA17_Chr1g0146381 | 71.264 | 87 | 20 | 1 | 92 | 173 | 1 | 87 | 3.20e-32 | 118 |
Msa0149750 | MtrunA17_Chr1g0146361 | 77.108 | 83 | 13 | 3 | 383 | 461 | 2 | 82 | 7.14e-32 | 117 |
Msa0149750 | MtrunA17_Chr3g0088691 | 41.489 | 188 | 96 | 6 | 98 | 280 | 4 | 182 | 1.21e-31 | 119 |
Msa0149750 | MtrunA17_Chr2g0300541 | 28.682 | 387 | 215 | 13 | 94 | 449 | 21 | 377 | 2.39e-30 | 121 |
Msa0149750 | MtrunA17_Chr2g0293331 | 64.444 | 90 | 17 | 1 | 9 | 83 | 3 | 92 | 7.78e-30 | 121 |
Msa0149750 | MtrunA17_Chr3g0088591 | 43.871 | 155 | 62 | 4 | 93 | 222 | 15 | 169 | 1.68e-29 | 113 |
Msa0149750 | MtrunA17_Chr8g0371101 | 29.600 | 375 | 198 | 17 | 94 | 429 | 1 | 348 | 4.35e-28 | 114 |
Msa0149750 | MtrunA17_Chr3g0140531 | 57.426 | 101 | 28 | 1 | 1 | 86 | 7 | 107 | 1.28e-27 | 115 |
Msa0149750 | MtrunA17_Chr3g0088651 | 46.377 | 138 | 57 | 4 | 98 | 221 | 4 | 138 | 2.41e-27 | 108 |
Msa0149750 | MtrunA17_Chr1g0206841 | 51.111 | 90 | 29 | 1 | 9 | 83 | 12 | 101 | 8.04e-23 | 92.8 |
Msa0149750 | MtrunA17_Chr1g0146351 | 60.317 | 63 | 24 | 1 | 21 | 83 | 21 | 82 | 7.09e-22 | 90.5 |
Msa0149750 | MtrunA17_Chr6g0457521 | 51.579 | 95 | 35 | 2 | 95 | 179 | 54 | 147 | 2.42e-21 | 90.9 |
Msa0149750 | MtrunA17_Chr3g0140541 | 51.724 | 87 | 27 | 1 | 12 | 83 | 19 | 105 | 3.66e-21 | 95.9 |
Msa0149750 | MtrunA17_Chr8g0349911 | 57.333 | 75 | 31 | 1 | 238 | 312 | 75 | 148 | 1.43e-20 | 89.7 |
Msa0149750 | MtrunA17_Chr1g0146411 | 52.874 | 87 | 25 | 2 | 12 | 83 | 27 | 112 | 2.96e-20 | 93.2 |
Msa0149750 | MtrunA17_Chr8g0351561 | 50.505 | 99 | 45 | 3 | 302 | 400 | 1 | 95 | 3.40e-20 | 87.0 |
Msa0149750 | MtrunA17_Chr1g0206861 | 50.562 | 89 | 29 | 1 | 10 | 83 | 13 | 101 | 5.15e-20 | 86.7 |
Msa0149750 | MtrunA17_Chr8g0384661 | 50.549 | 91 | 30 | 1 | 8 | 83 | 40 | 130 | 7.21e-20 | 92.0 |
Msa0149750 | MtrunA17_Chr1g0146491 | 50.575 | 87 | 28 | 1 | 12 | 83 | 17 | 103 | 1.09e-19 | 91.3 |
Msa0149750 | MtrunA17_Chr1g0206821 | 47.059 | 102 | 35 | 2 | 1 | 83 | 1 | 102 | 1.73e-19 | 91.3 |
Msa0149750 | MtrunA17_Chr3g0140761 | 51.724 | 87 | 27 | 1 | 12 | 83 | 27 | 113 | 3.19e-19 | 90.1 |
Msa0149750 | MtrunA17_Chr1g0206871 | 60.317 | 63 | 25 | 0 | 21 | 83 | 33 | 95 | 7.49e-19 | 89.0 |
Msa0149750 | MtrunA17_Chr3g0101901 | 41.791 | 134 | 71 | 5 | 98 | 227 | 25 | 155 | 1.07e-18 | 83.2 |
Msa0149750 | MtrunA17_Chr3g0130671 | 38.400 | 125 | 48 | 2 | 12 | 107 | 33 | 157 | 1.62e-18 | 85.5 |
Msa0149750 | MtrunA17_Chr3g0125091 | 51.724 | 87 | 27 | 1 | 12 | 83 | 28 | 114 | 2.97e-18 | 87.0 |
Msa0149750 | MtrunA17_Chr3g0125101 | 51.724 | 87 | 27 | 1 | 12 | 83 | 28 | 114 | 6.76e-18 | 85.9 |
Msa0149750 | MtrunA17_Chr3g0103261 | 47.619 | 84 | 29 | 1 | 12 | 80 | 17 | 100 | 7.51e-18 | 80.9 |
Msa0149750 | MtrunA17_Chr3g0125081 | 51.724 | 87 | 27 | 1 | 12 | 83 | 28 | 114 | 8.21e-18 | 85.9 |
Msa0149750 | MtrunA17_Chr3g0130641 | 48.276 | 87 | 30 | 1 | 12 | 83 | 27 | 113 | 1.20e-17 | 85.1 |
Msa0149750 | MtrunA17_Chr6g0488491 | 23.692 | 325 | 228 | 7 | 98 | 418 | 7 | 315 | 1.99e-17 | 83.6 |
Msa0149750 | MtrunA17_Chr1g0159761 | 48.276 | 87 | 30 | 1 | 12 | 83 | 21 | 107 | 3.78e-17 | 83.6 |
Msa0149750 | MtrunA17_Chr4g0010441 | 46.429 | 84 | 40 | 2 | 382 | 460 | 2 | 85 | 1.37e-16 | 75.1 |
Msa0149750 | MtrunA17_Chr4g0037201 | 48.276 | 87 | 30 | 1 | 12 | 83 | 53 | 139 | 1.71e-16 | 81.6 |
Msa0149750 | MtrunA17_Chr3g0130651 | 47.126 | 87 | 31 | 1 | 12 | 83 | 20 | 106 | 2.06e-16 | 81.3 |
Msa0149750 | MtrunA17_Chr3g0103231 | 47.619 | 84 | 29 | 1 | 12 | 80 | 17 | 100 | 1.30e-15 | 79.0 |
Msa0149750 | MtrunA17_Chr7g0261121 | 24.929 | 353 | 227 | 9 | 92 | 418 | 6 | 346 | 4.33e-15 | 76.6 |
Msa0149750 | MtrunA17_Chr3g0103211 | 46.429 | 84 | 30 | 1 | 12 | 80 | 17 | 100 | 2.25e-14 | 75.1 |
Msa0149750 | MtrunA17_Chr5g0402151 | 55.556 | 63 | 23 | 1 | 21 | 83 | 18 | 75 | 4.00e-14 | 72.8 |
Msa0149750 | MtrunA17_Chr6g0449121 | 56.579 | 76 | 22 | 3 | 342 | 414 | 2 | 69 | 7.27e-14 | 66.6 |
Msa0149750 | MtrunA17_Chr6g0457551 | 78.378 | 37 | 8 | 0 | 99 | 135 | 5 | 41 | 8.75e-14 | 65.5 |
Msa0149750 | MtrunA17_Chr5g0447221 | 55.072 | 69 | 30 | 1 | 21 | 88 | 47 | 115 | 1.87e-13 | 72.4 |
Msa0149750 | MtrunA17_Chr3g0103221 | 48.810 | 84 | 22 | 4 | 15 | 80 | 27 | 107 | 5.82e-13 | 70.9 |
Msa0149750 | MtrunA17_Chr3g0103271 | 50.820 | 61 | 29 | 1 | 21 | 80 | 45 | 105 | 1.85e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149750 | AT2G17030.1 | 32.108 | 408 | 213 | 17 | 98 | 460 | 2 | 390 | 2.83e-38 | 144 |
Msa0149750 | AT2G17036.1 | 29.612 | 412 | 210 | 19 | 99 | 460 | 3 | 384 | 7.00e-34 | 132 |
Msa0149750 | AT2G17036.2 | 29.612 | 412 | 210 | 19 | 99 | 460 | 2 | 383 | 7.16e-34 | 132 |
Msa0149750 | AT5G24040.1 | 28.125 | 384 | 235 | 15 | 100 | 460 | 4 | 369 | 1.20e-24 | 105 |
Msa0149750 | AT1G58360.1 | 54.023 | 87 | 25 | 1 | 12 | 83 | 30 | 116 | 2.93e-22 | 99.8 |
Msa0149750 | AT5G49630.1 | 52.874 | 87 | 26 | 1 | 12 | 83 | 26 | 112 | 1.52e-21 | 97.4 |
Msa0149750 | AT1G10010.1 | 54.023 | 87 | 25 | 1 | 12 | 83 | 21 | 107 | 2.06e-20 | 94.0 |
Msa0149750 | AT1G10010.2 | 54.023 | 87 | 25 | 1 | 12 | 83 | 22 | 108 | 2.20e-20 | 94.0 |
Msa0149750 | AT1G77380.1 | 55.172 | 87 | 24 | 1 | 12 | 83 | 23 | 109 | 1.11e-19 | 92.0 |
Msa0149750 | AT5G60060.1 | 28.834 | 326 | 201 | 15 | 98 | 405 | 9 | 321 | 6.25e-19 | 88.6 |
Msa0149750 | AT5G09220.1 | 49.425 | 87 | 29 | 1 | 12 | 83 | 39 | 125 | 1.55e-18 | 88.6 |
Msa0149750 | AT5G63850.1 | 48.276 | 87 | 30 | 1 | 12 | 83 | 12 | 98 | 5.65e-18 | 86.7 |
Msa0149750 | AT1G65770.1 | 27.419 | 372 | 223 | 18 | 98 | 449 | 2 | 346 | 8.18e-18 | 85.1 |
Msa0149750 | AT1G44100.1 | 46.667 | 90 | 33 | 1 | 12 | 86 | 21 | 110 | 6.48e-17 | 83.6 |
Msa0149750 | AT3G25750.2 | 27.879 | 330 | 193 | 12 | 97 | 407 | 3 | 306 | 4.58e-16 | 80.1 |
Msa0149750 | AT5G23810.5 | 56.250 | 64 | 27 | 1 | 21 | 83 | 43 | 106 | 3.79e-15 | 75.1 |
Msa0149750 | AT5G23810.3 | 56.250 | 64 | 27 | 1 | 21 | 83 | 43 | 106 | 3.79e-15 | 75.1 |
Msa0149750 | AT5G23810.4 | 56.250 | 64 | 27 | 1 | 21 | 83 | 43 | 106 | 4.54e-15 | 75.5 |
Msa0149750 | AT5G23810.2 | 56.250 | 64 | 27 | 1 | 21 | 83 | 43 | 106 | 1.20e-14 | 75.5 |
Msa0149750 | AT5G23810.1 | 56.250 | 64 | 27 | 1 | 21 | 83 | 43 | 106 | 3.24e-14 | 75.1 |
Msa0149750 | AT1G65760.1 | 23.426 | 397 | 230 | 18 | 99 | 460 | 5 | 362 | 2.97e-11 | 65.5 |
Find 136 sgRNAs with CRISPR-Local
Find 1131 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAATAAGCCCGGTTTATT+TGG | 0.098262 | 1_4:+10647332 | None:intergenic |
CCTAACATGTCGGCTTATTT+AGG | 0.211245 | 1_4:-10632494 | Msa0149750:CDS |
ATTGACGTGTTTAAGCTTAA+TGG | 0.230916 | 1_4:-10632251 | Msa0149750:CDS |
TCTTTCTCTCCTATCTCTTT+TGG | 0.249450 | 1_4:-10647377 | Msa0149750:five_prime_UTR |
CGAATTCTCCCTTCTTCATT+TGG | 0.252249 | 1_4:-10632720 | Msa0149750:CDS |
CCAGTTAGTTGCTGAATCTT+TGG | 0.264883 | 1_4:-10632381 | Msa0149750:CDS |
GGGTGAAGTTGGCGAATTTA+GGG | 0.273559 | 1_4:-10632214 | Msa0149750:CDS |
CTCGGCCCGATTGCCTGTTC+TGG | 0.279727 | 1_4:-10632566 | Msa0149750:CDS |
TGAATAAGCCCGGTTTATTT+GGG | 0.283084 | 1_4:+10647333 | None:intergenic |
CTGAACAATTCTAAATATTC+AGG | 0.290950 | 1_4:+10632020 | None:intergenic |
GGAGGAGAGGGTGGTGGTAT+TGG | 0.294808 | 1_4:+10632789 | None:intergenic |
AAAATGTTACGATGGTGATT+TGG | 0.295960 | 1_4:+10632956 | None:intergenic |
CTGAATATTTAGAATTGTTC+AGG | 0.311228 | 1_4:-10632019 | Msa0149750:CDS |
AGGGAATTGTGTCATCATTA+TGG | 0.311409 | 1_4:-10632123 | Msa0149750:CDS |
TGGGTGAAGTTGGCGAATTT+AGG | 0.324049 | 1_4:-10632215 | Msa0149750:CDS |
GAGGAGAGGGTGGTGGTATT+GGG | 0.327727 | 1_4:+10632790 | None:intergenic |
CATGAGGAAGAAACTGTGTT+TGG | 0.352930 | 1_4:+10632871 | None:intergenic |
AAGGTACATACCAGTTCTTT+TGG | 0.354167 | 1_4:+10647230 | None:intergenic |
CCTAAATAAGCCGACATGTT+AGG | 0.359859 | 1_4:+10632494 | None:intergenic |
CCAAAGATTCAGCAACTAAC+TGG | 0.360086 | 1_4:+10632381 | None:intergenic |
CAGGGGTGTTGGCTCTAGCA+TGG | 0.361926 | 1_4:-10641094 | Msa0149750:CDS |
CTGAATCTTTGGTTGGTGGT+GGG | 0.362504 | 1_4:-10632370 | Msa0149750:CDS |
AAATGTTACGATGGTGATTT+GGG | 0.370867 | 1_4:+10632957 | None:intergenic |
GGAGAAGAAGTGGGTGAAGT+TGG | 0.376827 | 1_4:-10632225 | Msa0149750:CDS |
CACCACCCTCTCCTCCGATA+TGG | 0.376904 | 1_4:-10632782 | Msa0149750:CDS |
TTCTAAATATTCAGGATAAT+CGG | 0.386154 | 1_4:+10632028 | None:intergenic |
TGTAGTAGGGGCAGGGGTGT+TGG | 0.391643 | 1_4:-10641105 | Msa0149750:intron |
AATAACTACCCCAAATAAAC+CGG | 0.392382 | 1_4:-10647342 | Msa0149750:five_prime_UTR |
GGTAGTGTCATTCGTTCGTC+AGG | 0.400917 | 1_4:+10632680 | None:intergenic |
ACATACACTCATGAATGATA+TGG | 0.401387 | 1_4:+10647401 | None:intergenic |
GCTGAATCTTTGGTTGGTGG+TGG | 0.408516 | 1_4:-10632371 | Msa0149750:CDS |
GTCTTGTAGCTGATTGCTAT+AGG | 0.413676 | 1_4:-10640995 | Msa0149750:CDS |
TCCGATCTATTTGTTCCAGT+TGG | 0.416540 | 1_4:-10632994 | Msa0149750:CDS |
TTCTTCCTCATGAAAGTTCG+TGG | 0.416816 | 1_4:-10632860 | Msa0149750:CDS |
TACTGGCTGTTCTCCAGAAC+AGG | 0.416958 | 1_4:+10632553 | None:intergenic |
AATGATGACACAATTCCCTT+TGG | 0.418310 | 1_4:+10632127 | None:intergenic |
TCAAATGCGGTGATCAGAAT+TGG | 0.418976 | 1_4:-10632526 | Msa0149750:CDS |
ATCAGATTCAGAAGATCCTT+TGG | 0.422498 | 1_4:+10633055 | None:intergenic |
CCTTATGTGGTAGACAAAAC+TGG | 0.428313 | 1_4:-10632446 | Msa0149750:CDS |
GGAAATAAACCTACCATTCT+CGG | 0.432303 | 1_4:-10632584 | Msa0149750:CDS |
GAATGGTAGGTTTATTTCCA+TGG | 0.436050 | 1_4:+10632588 | None:intergenic |
ATGATGACACAATTCCCTTT+GGG | 0.436460 | 1_4:+10632128 | None:intergenic |
CAAGCTGTCAAGAGCTACTT+AGG | 0.436812 | 1_4:-10640930 | Msa0149750:intron |
CGGTGACTGCCAAAAGAGAT+AGG | 0.441047 | 1_4:+10647368 | None:intergenic |
AGGGGTGTTGGCTCTAGCAT+GGG | 0.441108 | 1_4:-10641093 | Msa0149750:CDS |
TGTTCTCCAGAACAGGCAAT+CGG | 0.445789 | 1_4:+10632560 | None:intergenic |
TACCAGCTATCCATCCTAGT+TGG | 0.452399 | 1_4:+10641063 | None:intergenic |
TGAATCTTTGGTTGGTGGTG+GGG | 0.454712 | 1_4:-10632369 | Msa0149750:CDS |
CGGACAATTACTGTTGGGCT+TGG | 0.460739 | 1_4:-10632422 | Msa0149750:CDS |
TGTTACTTCTTTATCCACTT+TGG | 0.461738 | 1_4:+10631996 | None:intergenic |
CTAGGATGGATAGCTGGTAT+AGG | 0.464604 | 1_4:-10641059 | Msa0149750:CDS |
GATGGTAAAGCCAAAAGAAC+TGG | 0.469877 | 1_4:-10647240 | Msa0149750:intron |
TTCGTTGAAGTCGAAGAAGA+TGG | 0.473038 | 1_4:+10632739 | None:intergenic |
GTTGGCTCTAGCATGGGCCA+TGG | 0.482757 | 1_4:-10641087 | Msa0149750:CDS |
GTTGCTGAATCTTTGGTTGG+TGG | 0.484723 | 1_4:-10632374 | Msa0149750:CDS |
AAGTTCGTGGTTGTCGTCCT+TGG | 0.485505 | 1_4:-10632847 | Msa0149750:CDS |
GCCATTGCTGTCACGTCCCA+TGG | 0.489390 | 1_4:-10632605 | Msa0149750:CDS |
ACCAGCTATCCATCCTAGTT+GGG | 0.489518 | 1_4:+10641064 | None:intergenic |
AAGAGGAAGAGCATCATTCA+TGG | 0.494234 | 1_4:-10633110 | Msa0149750:CDS |
AGAAGCAGAAAATGAACCTT+GGG | 0.494675 | 1_4:+10632169 | None:intergenic |
GATGGAGGAAGAGCGCCAAC+TGG | 0.495942 | 1_4:+10632979 | None:intergenic |
ATGATGATATTAAACGTGTA+AGG | 0.497672 | 1_4:-10632274 | Msa0149750:CDS |
AAGATGAACGTAAGCCATAT+CGG | 0.498425 | 1_4:+10632768 | None:intergenic |
CCATGGCGACGAAGGCAGAT+TGG | 0.500053 | 1_4:-10633087 | Msa0149750:CDS |
CTGGACGGACAATTACTGTT+GGG | 0.500462 | 1_4:-10632427 | Msa0149750:CDS |
GTTCTCCAGAACAGGCAATC+GGG | 0.504777 | 1_4:+10632561 | None:intergenic |
AATTACTGTTGGGCTTGGAC+CGG | 0.505724 | 1_4:-10632417 | Msa0149750:CDS |
TGGGGATACTAAATTCTTAG+TGG | 0.507379 | 1_4:-10632351 | Msa0149750:CDS |
TGGATTTGTGTGTTCCCAAA+GGG | 0.510917 | 1_4:-10632142 | Msa0149750:CDS |
CGTAAGCCATATCGGAGGAG+AGG | 0.517535 | 1_4:+10632776 | None:intergenic |
TTCTCAATCAATAGCCGTCT+CGG | 0.517978 | 1_4:-10632656 | Msa0149750:CDS |
TATTACACAAACTCTAATCA+TGG | 0.520458 | 1_4:-10647274 | Msa0149750:CDS |
ACAGGCAATCGGGCCGAGAA+TGG | 0.520495 | 1_4:+10632571 | None:intergenic |
TCACCGCATTTGAACACTAC+TGG | 0.521782 | 1_4:+10632536 | None:intergenic |
CGTGTTTAAGCTTAATGGAA+GGG | 0.525083 | 1_4:-10632246 | Msa0149750:CDS |
GAGCGATGGTGATTTGTTGT+TGG | 0.526288 | 1_4:-10632327 | Msa0149750:CDS |
AATGGTAGGTTTATTTCCAT+GGG | 0.528213 | 1_4:+10632589 | None:intergenic |
TTAGTTGCTGAATCTTTGGT+TGG | 0.531606 | 1_4:-10632377 | Msa0149750:CDS |
CAGAAGCAGAAAATGAACCT+TGG | 0.535795 | 1_4:+10632168 | None:intergenic |
GCATGGGCCATGGCCCAACT+AGG | 0.536744 | 1_4:-10641077 | Msa0149750:CDS |
AAAATTACACAAAACTCCAC+TGG | 0.537987 | 1_4:-10632818 | Msa0149750:CDS |
AGTTGGTTGCCAAATGAAGA+AGG | 0.539757 | 1_4:+10632711 | None:intergenic |
GGGCCATGGCCCAACTAGGA+TGG | 0.542624 | 1_4:-10641073 | Msa0149750:CDS |
AACAGTTGTAGTAGGGGCAG+GGG | 0.543889 | 1_4:-10641111 | Msa0149750:intron |
TTCGTCAGGGCAGATGAAGT+TGG | 0.547154 | 1_4:+10632694 | None:intergenic |
CCAATCTGCCTTCGTCGCCA+TGG | 0.551203 | 1_4:+10633087 | None:intergenic |
TATCCATCCTAGTTGGGCCA+TGG | 0.551644 | 1_4:+10641070 | None:intergenic |
ACTGGACGGACAATTACTGT+TGG | 0.551977 | 1_4:-10632428 | Msa0149750:CDS |
AACTGGACAGTGGAATCATC+CGG | 0.552172 | 1_4:+10632398 | None:intergenic |
TAATGGAAGGGAGAAGAAGT+GGG | 0.552268 | 1_4:-10632234 | Msa0149750:CDS |
ACGTGTTTAAGCTTAATGGA+AGG | 0.553081 | 1_4:-10632247 | Msa0149750:CDS |
GTTAGTTATCTGAATAAGCC+CGG | 0.557104 | 1_4:+10647323 | None:intergenic |
GCCCAACTAGGATGGATAGC+TGG | 0.559262 | 1_4:-10641065 | Msa0149750:CDS |
AGGTTTCCAGACCCAATCAC+TGG | 0.561683 | 1_4:-10640975 | Msa0149750:CDS |
AAGAGCATCATTCATGGCCA+TGG | 0.562321 | 1_4:-10633104 | Msa0149750:CDS |
TTTCAAAGGTCGGCCTTATG+TGG | 0.563694 | 1_4:-10632459 | Msa0149750:CDS |
TCGTTGAAGTCGAAGAAGAT+GGG | 0.567497 | 1_4:+10632740 | None:intergenic |
TAACAGTTGTAGTAGGGGCA+GGG | 0.570383 | 1_4:-10641112 | Msa0149750:intron |
ACTGTAAGTGAAAATAGAGA+TGG | 0.570667 | 1_4:+10641016 | None:intergenic |
GCAATCGGGCCGAGAATGGT+AGG | 0.571996 | 1_4:+10632575 | None:intergenic |
TTAATGGAAGGGAGAAGAAG+TGG | 0.581242 | 1_4:-10632235 | Msa0149750:CDS |
AGACGGCTATTGATTGAGAA+AGG | 0.583157 | 1_4:+10632659 | None:intergenic |
CATATCGGAGGAGAGGGTGG+TGG | 0.584129 | 1_4:+10632783 | None:intergenic |
GTTACGATGGTGATTTGGGA+TGG | 0.585448 | 1_4:+10632961 | None:intergenic |
ATTCATGGCCATGGCGACGA+AGG | 0.591459 | 1_4:-10633095 | Msa0149750:CDS |
TAGAATTGTTCAGGCCAAAG+TGG | 0.593986 | 1_4:-10632010 | Msa0149750:CDS |
GCCAACTGGAACAAATAGAT+CGG | 0.600156 | 1_4:+10632993 | None:intergenic |
GGTGAAGTTGGCGAATTTAG+GGG | 0.608400 | 1_4:-10632213 | Msa0149750:CDS |
TCATGAATGATATGGATGGA+TGG | 0.612388 | 1_4:+10647409 | None:intergenic |
TTGGATTTGTGTGTTCCCAA+AGG | 0.612820 | 1_4:-10632143 | Msa0149750:CDS |
ACGATGGTGATTTGGGATGG+AGG | 0.614264 | 1_4:+10632964 | None:intergenic |
GTAAGCCATATCGGAGGAGA+GGG | 0.615182 | 1_4:+10632777 | None:intergenic |
CATCATCATCATCAAACCTA+CGG | 0.615431 | 1_4:+10632291 | None:intergenic |
TCCATGGGACGTGACAGCAA+TGG | 0.616621 | 1_4:+10632604 | None:intergenic |
GAAGGTTATACCTAACATGT+CGG | 0.622656 | 1_4:-10632504 | Msa0149750:CDS |
GTAATGGAATAAATGTTGAG+TGG | 0.623564 | 1_4:+10632920 | None:intergenic |
AGATTGGTCTGAACTGCCAA+AGG | 0.625067 | 1_4:-10633071 | Msa0149750:CDS |
ACACTCATGAATGATATGGA+TGG | 0.625982 | 1_4:+10647405 | None:intergenic |
AGCCATATCGGAGGAGAGGG+TGG | 0.626684 | 1_4:+10632780 | None:intergenic |
AATGTTGAGTGGAAATCTGA+TGG | 0.632545 | 1_4:+10632931 | None:intergenic |
GAATAAGCCCGGTTTATTTG+GGG | 0.638751 | 1_4:+10647334 | None:intergenic |
GTTGGTTGCCAAATGAAGAA+GGG | 0.641952 | 1_4:+10632712 | None:intergenic |
ATAACTACCCCAAATAAACC+GGG | 0.642827 | 1_4:-10647341 | Msa0149750:five_prime_UTR |
ATCATGGAGCAAGATGATGA+TGG | 0.644856 | 1_4:-10647258 | Msa0149750:CDS |
ATGCGGTGATCAGAATTGGA+AGG | 0.647926 | 1_4:-10632522 | Msa0149750:CDS |
TGGCAGACGTTTACGACCGT+AGG | 0.650040 | 1_4:-10632307 | Msa0149750:CDS |
TATTCAGGATAATCGGTGAG+AGG | 0.652192 | 1_4:+10632035 | None:intergenic |
AAATTCTTAGTGGAGAGCGA+TGG | 0.660064 | 1_4:-10632341 | Msa0149750:CDS |
GTAGTGTCATTCGTTCGTCA+GGG | 0.663502 | 1_4:+10632681 | None:intergenic |
TGTAGGGAACAACACCGAGA+CGG | 0.665997 | 1_4:+10632642 | None:intergenic |
TTCAGCAACTAACTGGACAG+TGG | 0.668635 | 1_4:+10632388 | None:intergenic |
ATGTGGTAGACAAAACTGGA+CGG | 0.697171 | 1_4:-10632442 | Msa0149750:CDS |
GACAACCACGAACTTTCATG+AGG | 0.703316 | 1_4:+10632855 | None:intergenic |
TGATGGTTAAAATGTTACGA+TGG | 0.713740 | 1_4:+10632948 | None:intergenic |
ATGAACGTAAGCCATATCGG+AGG | 0.713889 | 1_4:+10632771 | None:intergenic |
CAGCCAGTAGTGTTCAAATG+CGG | 0.725301 | 1_4:-10632539 | Msa0149750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAATATAAAATCAAATAAA+TGG | + | chr1_4:10638877-10638896 | None:intergenic | 10.0% |
!!! | TTATATTTCTATTTGATAAT+AGG | - | chr1_4:10638888-10638907 | Msa0149750:intron | 10.0% |
!! | AATGGAATATATATTATATA+TGG | + | chr1_4:10639219-10639238 | Msa0149770:CDS | 10.0% |
!!! | TTATTTTTTATTTTTTTGAG+GGG | - | chr1_4:10641263-10641282 | Msa0149750:intron | 10.0% |
!! | ATATAAGATATATAATAAGA+TGG | - | chr1_4:10643608-10643627 | Msa0149750:intron | 10.0% |
!!! | ATTAATATTTTTCAAATGTT+GGG | + | chr1_4:10644138-10644157 | None:intergenic | 10.0% |
!!! | AATTAATATTTTTCAAATGT+TGG | + | chr1_4:10644139-10644158 | None:intergenic | 10.0% |
!!! | ATTATATTTTTTTAAAGGAA+AGG | - | chr1_4:10644575-10644594 | Msa0149750:intron | 10.0% |
!!! | ACAATAATAATTTCTATTTT+GGG | + | chr1_4:10644634-10644653 | None:intergenic | 10.0% |
!! | AATAAGACTTAATTAATATT+AGG | - | chr1_4:10645273-10645292 | Msa0149750:intron | 10.0% |
!!! | AATTTTTATTTAAATTCTAG+TGG | + | chr1_4:10645835-10645854 | None:intergenic | 10.0% |
!!! | AATAATTTGTTTTTGAATTA+AGG | + | chr1_4:10646169-10646188 | None:intergenic | 10.0% |
!!! | TTCAAAAACAAATTATTTTT+TGG | - | chr1_4:10646172-10646191 | Msa0149750:intron | 10.0% |
!! | TAAAAAAAGTTACTATATTT+AGG | + | chr1_4:10646216-10646235 | None:intergenic | 10.0% |
!!! | AATTATCTAATGTTATTTTT+TGG | - | chr1_4:10646271-10646290 | Msa0149750:intron | 10.0% |
!!! | TCAACACTAAATATAATTTT+AGG | + | chr1_4:10632513-10632532 | None:intergenic | 15.0% |
!! | TTTGAAGAAAAAAAAATGTT+TGG | + | chr1_4:10637275-10637294 | Msa0149760:intron | 15.0% |
!! | TTTCATTTATACTTATTTAG+AGG | + | chr1_4:10638277-10638296 | None:intergenic | 15.0% |
!! | ATCATGTTATGATTAATATT+TGG | - | chr1_4:10638298-10638317 | Msa0149750:intron | 15.0% |
!! | TACATAATACAAAAAAATCA+TGG | - | chr1_4:10639149-10639168 | Msa0149750:intron | 15.0% |
!! | AACTTCAAAAATATCAATAA+TGG | + | chr1_4:10639237-10639256 | Msa0149770:CDS | 15.0% |
!!! | TTATGAAATTAAAGTGTTTA+AGG | - | chr1_4:10640575-10640594 | Msa0149750:intron | 15.0% |
!!! | CATGTTTTAATATTCTATTA+AGG | - | chr1_4:10643241-10643260 | Msa0149750:intron | 15.0% |
!!! | TATTTTCTGTTTTTAGTATA+TGG | - | chr1_4:10643267-10643286 | Msa0149750:intron | 15.0% |
!! | TAAACATACACTTATTAATT+TGG | - | chr1_4:10643799-10643818 | Msa0149750:intron | 15.0% |
!! | AAACATACACTTATTAATTT+GGG | - | chr1_4:10643800-10643819 | Msa0149750:intron | 15.0% |
!!! | TTAATATTTTTCAAATGTTG+GGG | + | chr1_4:10644137-10644156 | None:intergenic | 15.0% |
!!! | CACAATAATAATTTCTATTT+TGG | + | chr1_4:10644635-10644654 | None:intergenic | 15.0% |
!!! | ATTTTATTCAAGCAATATTT+TGG | + | chr1_4:10645256-10645275 | None:intergenic | 15.0% |
!!! | TTTAGAATATAATAAATCCT+AGG | + | chr1_4:10646116-10646135 | None:intergenic | 15.0% |
!! | AATTAAGATAGAAAGGAATA+AGG | + | chr1_4:10632270-10632289 | None:intergenic | 20.0% |
!! | AGTAGTATTTCATGATTATA+TGG | - | chr1_4:10632326-10632345 | Msa0149750:CDS | 20.0% |
!! | ATCAAACATGTTATTGATAT+TGG | + | chr1_4:10632463-10632482 | None:intergenic | 20.0% |
!!! | TGATAATATTTTTGTTACTC+TGG | + | chr1_4:10632737-10632756 | None:intergenic | 20.0% |
!!! | TTGCAATTTTTGTTTCTTTT+CGG | + | chr1_4:10633092-10633111 | None:intergenic | 20.0% |
!! | TTTCTCAAAAGAATTATCTA+AGG | + | chr1_4:10634133-10634152 | None:intergenic | 20.0% |
!! | GAAAAGAATTCTTATTATTC+CGG | + | chr1_4:10637303-10637322 | Msa0149760:intron | 20.0% |
!!! | TGATAATATTTTTGTTACTC+TGG | + | chr1_4:10632737-10632756 | None:intergenic | 20.0% |
!!! | TTGCAATTTTTGTTTCTTTT+CGG | + | chr1_4:10633092-10633111 | None:intergenic | 20.0% |
!!! | ATAGTTGCTTTGAAAATTTT+CGG | + | chr1_4:10638015-10638034 | None:intergenic | 20.0% |
!!! | TGTATCATATATTTAGAACA+GGG | + | chr1_4:10638621-10638640 | None:intergenic | 20.0% |
!!! | ATGTATCATATATTTAGAAC+AGG | + | chr1_4:10638622-10638641 | None:intergenic | 20.0% |
!!! | TATTTCTATTTGATAATAGG+TGG | - | chr1_4:10638891-10638910 | Msa0149750:intron | 20.0% |
!! | AAATCATGGTTAGATTAATT+TGG | - | chr1_4:10639163-10639182 | Msa0149750:intron | 20.0% |
!! | TCAGTCATATATATCATTAT+GGG | + | chr1_4:10639605-10639624 | Msa0149780:intron | 20.0% |
!! | TTATGGATAATATCTTCAAT+CGG | - | chr1_4:10640729-10640748 | Msa0149750:intron | 20.0% |
!!! | TTTAGAATATTCAGGATAAT+TGG | + | chr1_4:10640807-10640826 | None:intergenic | 20.0% |
!! | AATAAAATTAAATGAAGAGC+TGG | + | chr1_4:10641069-10641088 | None:intergenic | 20.0% |
!!! | CCAAAACATTTTTTTTTTGA+AGG | + | chr1_4:10641348-10641367 | None:intergenic | 20.0% |
!!! | CCTTCAAAAAAAAAATGTTT+TGG | - | chr1_4:10641345-10641364 | Msa0149750:intron | 20.0% |
!!! | TGTATAATTTTAAACAACCA+AGG | + | chr1_4:10641778-10641797 | None:intergenic | 20.0% |
!! | AAAATTATACAAAATTCCAC+CGG | - | chr1_4:10641787-10641806 | Msa0149750:intron | 20.0% |
!! | TTTCATATGAATGTGTAATT+AGG | + | chr1_4:10642918-10642937 | None:intergenic | 20.0% |
!! | TTGTAAAGTTGAAACTTAAT+TGG | - | chr1_4:10643067-10643086 | Msa0149750:intron | 20.0% |
!!! | TGTTTTTAGTATATGGTTTA+TGG | - | chr1_4:10643274-10643293 | Msa0149750:intron | 20.0% |
!! | TAATCAAACGAATTGTTTAA+TGG | - | chr1_4:10643481-10643500 | Msa0149750:intron | 20.0% |
!! | ATGCATTACAATATTATTAG+TGG | + | chr1_4:10643646-10643665 | None:intergenic | 20.0% |
!! | TGAAATTATGTTTATGAAAG+TGG | + | chr1_4:10644991-10645010 | None:intergenic | 20.0% |
!! | GAAGAATATATGTTTATGAA+AGG | + | chr1_4:10645042-10645061 | None:intergenic | 20.0% |
!!! | AATATTTTGGACATAAATCA+AGG | + | chr1_4:10645243-10645262 | None:intergenic | 20.0% |
!! | ACTAATTTCATAATTCCATA+AGG | - | chr1_4:10645357-10645376 | Msa0149750:intron | 20.0% |
!! | CTAATTTCATAATTCCATAA+GGG | - | chr1_4:10645358-10645377 | Msa0149750:intron | 20.0% |
!! | AACATAAGTAAAAAGAAAAC+AGG | - | chr1_4:10645410-10645429 | Msa0149750:intron | 20.0% |
!! | AAAAAGTAGCTAACATAAAT+TGG | - | chr1_4:10645591-10645610 | Msa0149750:intron | 20.0% |
!! | AAATGATCAATTTATGATAG+TGG | + | chr1_4:10645736-10645755 | None:intergenic | 20.0% |
!! | ACTATCATAAATTGATCATT+TGG | - | chr1_4:10645735-10645754 | Msa0149750:intron | 20.0% |
!! | TTTATTTAAATTCTAGTGGT+AGG | + | chr1_4:10645831-10645850 | None:intergenic | 20.0% |
!! | AAAAGACTTCTTAAATGAAT+TGG | + | chr1_4:10646065-10646084 | None:intergenic | 20.0% |
!! | TTCTAAATATTCAGGATAAT+CGG | + | chr1_4:10647453-10647472 | None:intergenic | 20.0% |
! | TATTACACAAACTCTAATCA+TGG | - | chr1_4:10632204-10632223 | Msa0149750:CDS | 25.0% |
! | TTCAGAGAATTAAGATAGAA+AGG | + | chr1_4:10632277-10632296 | None:intergenic | 25.0% |
!!! | CAATAACATGTTTGATTTTG+CGG | - | chr1_4:10632467-10632486 | Msa0149750:CDS | 25.0% |
! | ATTTCTGTAAGGAAATTTGT+TGG | + | chr1_4:10632666-10632685 | None:intergenic | 25.0% |
! | ACAAATTTCCTTACAGAAAT+TGG | - | chr1_4:10632666-10632685 | Msa0149750:CDS | 25.0% |
!!! | ACACAGTAGTTATTTTATCA+CGG | + | chr1_4:10632695-10632714 | None:intergenic | 25.0% |
! | AAAAAATAGTTTCTTCTGTG+AGG | + | chr1_4:10632975-10632994 | None:intergenic | 25.0% |
!! | ATTGTGTTGTTATTCTGATT+TGG | - | chr1_4:10633018-10633037 | Msa0149750:CDS | 25.0% |
!! | TTGTGTTGTTATTCTGATTT+GGG | - | chr1_4:10633019-10633038 | Msa0149750:CDS | 25.0% |
! | ACTTCCTCATGTATAAATAT+AGG | + | chr1_4:10633068-10633087 | None:intergenic | 25.0% |
! | TTTGCAATCAAAGATTCTTT+CGG | + | chr1_4:10633162-10633181 | None:intergenic | 25.0% |
!! | ATTTTGAATGCTCACAAATA+TGG | + | chr1_4:10633299-10633318 | None:intergenic | 25.0% |
! | GATAAAAGAAAATCTACTAC+TGG | + | chr1_4:10633750-10633769 | None:intergenic | 25.0% |
!! | GTGAATTTTAAATTATCCTC+AGG | + | chr1_4:10634053-10634072 | None:intergenic | 25.0% |
!! | GAGGATAATTTAAAATTCAC+AGG | - | chr1_4:10634053-10634072 | Msa0149750:intron | 25.0% |
!! | AATTTAAAATTCACAGGAAG+TGG | - | chr1_4:10634059-10634078 | Msa0149750:intron | 25.0% |
!! | ATTTAAAATTCACAGGAAGT+GGG | - | chr1_4:10634060-10634079 | Msa0149750:intron | 25.0% |
! | TATTGTCTTATAACTGAAGA+AGG | + | chr1_4:10634908-10634927 | None:intergenic | 25.0% |
! | TTATAAGACAATATGCATCA+TGG | - | chr1_4:10634915-10634934 | Msa0149750:intron | 25.0% |
! | TCGATTTATTACATAACAAG+CGG | - | chr1_4:10635393-10635412 | Msa0149750:intron | 25.0% |
!! | CTAACATTTTGTAAACAAGA+GGG | + | chr1_4:10635562-10635581 | None:intergenic | 25.0% |
!! | TCTAACATTTTGTAAACAAG+AGG | + | chr1_4:10635563-10635582 | None:intergenic | 25.0% |
! | AAGAAGAATTTATTGTCTGT+TGG | + | chr1_4:10636174-10636193 | None:intergenic | 25.0% |
! | AAGAAGAATATCAAATGCTA+CGG | + | chr1_4:10636570-10636589 | None:intergenic | 25.0% |
! | ACAGAATATTCTTAAAGAGA+AGG | + | chr1_4:10636962-10636981 | None:intergenic | 25.0% |
!! | TCTTTAAGAATATTCTGTTG+TGG | - | chr1_4:10636964-10636983 | Msa0149750:intron | 25.0% |
! | TACTCTAATAAAATTGTACG+AGG | + | chr1_4:10637000-10637019 | None:intergenic | 25.0% |
!!! | TTTTTTTCTTCAAACTAGAC+CGG | - | chr1_4:10637281-10637300 | Msa0149750:intron | 25.0% |
!! | ATAAGAATTCTTTTCTGATG+TGG | - | chr1_4:10637308-10637327 | Msa0149750:intron | 25.0% |
! | AAAAAATAGTTTCTTCTGTG+AGG | + | chr1_4:10632975-10632994 | None:intergenic | 25.0% |
!! | ATTGTGTTGTTATTCTGATT+TGG | - | chr1_4:10633018-10633037 | Msa0149750:CDS | 25.0% |
!! | TTGTGTTGTTATTCTGATTT+GGG | - | chr1_4:10633019-10633038 | Msa0149750:CDS | 25.0% |
! | TTTGCAATCAAAGATTCTTT+CGG | + | chr1_4:10633162-10633181 | None:intergenic | 25.0% |
!!! | AAAATTTTCGGGTATTTGTA+TGG | + | chr1_4:10638003-10638022 | None:intergenic | 25.0% |
!!! | TAGTTGCTTTGAAAATTTTC+GGG | + | chr1_4:10638014-10638033 | None:intergenic | 25.0% |
!! | CAAAAAAACAAAGCATTTGA+CGG | + | chr1_4:10638058-10638077 | None:intergenic | 25.0% |
! | CAATCCTGTGAAAAATAAAT+TGG | - | chr1_4:10638202-10638221 | Msa0149750:intron | 25.0% |
!! | AAATGCTAATTTGTGTTCTA+AGG | + | chr1_4:10638254-10638273 | None:intergenic | 25.0% |
! | ATATCATAACAGTTGTAGTA+GGG | - | chr1_4:10638360-10638379 | Msa0149750:intron | 25.0% |
! | ATCAATTCTTGAAGAGTAAA+GGG | + | chr1_4:10638673-10638692 | None:intergenic | 25.0% |
!!! | ATTTGTGGATTGATTTTGTA+TGG | - | chr1_4:10638927-10638946 | Msa0149750:intron | 25.0% |
!! | GTTAGATTAATTTGGTAAGT+AGG | - | chr1_4:10639171-10639190 | Msa0149750:intron | 25.0% |
! | AAATAGGCCAAAACTTATTA+AGG | + | chr1_4:10639377-10639396 | Msa0149770:CDS | 25.0% |
!!! | TAATAAGTTTTGGCCTATTT+AGG | - | chr1_4:10639377-10639396 | Msa0149750:intron | 25.0% |
!! | TAAAAGCCTATTTTATGCTA+AGG | + | chr1_4:10639427-10639446 | Msa0149770:CDS | 25.0% |
!!! | CATAAAATAGGCTTTTAAGT+CGG | - | chr1_4:10639430-10639449 | Msa0149750:intron | 25.0% |
! | GTCAGTCATATATATCATTA+TGG | + | chr1_4:10639606-10639625 | Msa0149780:intron | 25.0% |
! | AAATGTTACTATGGTGATTT+GGG | + | chr1_4:10639880-10639899 | None:intergenic | 25.0% |
! | AAAATGTTACTATGGTGATT+TGG | + | chr1_4:10639881-10639900 | None:intergenic | 25.0% |
! | TGATGGTTAAAATGTTACTA+TGG | + | chr1_4:10639889-10639908 | None:intergenic | 25.0% |
! | TATGTAATTCTAAACAACCA+AGG | + | chr1_4:10640034-10640053 | None:intergenic | 25.0% |
! | AGAATTACATAAAACTCAAC+TGG | - | chr1_4:10640043-10640062 | Msa0149750:intron | 25.0% |
! | AATGATAGGTTTATTTCCAT+GGG | + | chr1_4:10640262-10640281 | None:intergenic | 25.0% |
!! | TGATGGACATATTAAATTCT+TGG | - | chr1_4:10640494-10640513 | Msa0149750:intron | 25.0% |
! | CATAATCATTATCATACCAA+CGG | + | chr1_4:10640560-10640579 | None:intergenic | 25.0% |
! | TTAAAGAAAATGAGAAGAAG+TGG | - | chr1_4:10640598-10640617 | Msa0149750:intron | 25.0% |
! | TAAAGAAAATGAGAAGAAGT+GGG | - | chr1_4:10640599-10640618 | Msa0149750:intron | 25.0% |
! | CGTCAGTCATATATATATAT+AGG | + | chr1_4:10641389-10641408 | None:intergenic | 25.0% |
!! | AATTGATGGTTAAAATGTCA+CGG | + | chr1_4:10641624-10641643 | None:intergenic | 25.0% |
! | GAAGATTATTCCTGAAATAT+CGG | - | chr1_4:10642083-10642102 | Msa0149750:intron | 25.0% |
! | TATCATCATCATCAAACTTA+CGG | + | chr1_4:10642293-10642312 | None:intergenic | 25.0% |
! | ATGATGATATTAAACGTGTA+AGG | - | chr1_4:10642304-10642323 | Msa0149750:intron | 25.0% |
!! | CTCTTCATTTTATTGTTGAT+GGG | - | chr1_4:10642830-10642849 | Msa0149750:intron | 25.0% |
! | TGAATGTGTAATTAGGATTT+AGG | + | chr1_4:10642911-10642930 | None:intergenic | 25.0% |
! | TTACACTTATCTCTCTATTA+AGG | - | chr1_4:10643196-10643215 | Msa0149750:intron | 25.0% |
!! | CTCTCTATTAAGGTTTATTT+TGG | - | chr1_4:10643206-10643225 | Msa0149750:intron | 25.0% |
! | CTCATGAAGAATTAATAAGT+CGG | + | chr1_4:10643441-10643460 | None:intergenic | 25.0% |
! | GACTTATTAATTCTTCATGA+GGG | - | chr1_4:10643440-10643459 | Msa0149750:intron | 25.0% |
! | CATTACAATATTATTAGTGG+TGG | + | chr1_4:10643643-10643662 | None:intergenic | 25.0% |
! | ATTGTAATGCATATAGATGA+AGG | - | chr1_4:10643654-10643673 | Msa0149750:intron | 25.0% |
!!! | TTCCATGTTTTGTTTGTATT+AGG | + | chr1_4:10643734-10643753 | None:intergenic | 25.0% |
!!! | GATTTTAATGTTTTCATGCA+AGG | - | chr1_4:10643914-10643933 | Msa0149750:intron | 25.0% |
! | GAAAAATAAGACAGATACAA+AGG | + | chr1_4:10643969-10643988 | None:intergenic | 25.0% |
! | ATATTGATGAGGTAGTTATT+AGG | - | chr1_4:10644197-10644216 | Msa0149750:intron | 25.0% |
! | ATAGCTATATAACCATTCTA+TGG | - | chr1_4:10644228-10644247 | Msa0149750:intron | 25.0% |
!!! | TTAATTTGCTGTCTATTCTT+TGG | - | chr1_4:10644454-10644473 | Msa0149750:intron | 25.0% |
!!! | ATCTCTGTTGATTTTTTTGT+AGG | + | chr1_4:10644789-10644808 | None:intergenic | 25.0% |
! | AGAAATAGAAGTAAGAGATT+TGG | + | chr1_4:10644876-10644895 | None:intergenic | 25.0% |
! | ATGAAAATATGAGGCTATAT+TGG | + | chr1_4:10645090-10645109 | None:intergenic | 25.0% |
! | TAACAAGTCATGAAAATATG+AGG | + | chr1_4:10645099-10645118 | None:intergenic | 25.0% |
! | AAATAGTCTAAATTCTTTCG+AGG | + | chr1_4:10645160-10645179 | None:intergenic | 25.0% |
! | ATCAAGGTAATGAAAGTTTA+AGG | + | chr1_4:10645227-10645246 | None:intergenic | 25.0% |
!! | CCAATTCTTTCTTTTTGTTA+TGG | + | chr1_4:10645312-10645331 | None:intergenic | 25.0% |
! | CCATAACAAAAAGAAAGAAT+TGG | - | chr1_4:10645309-10645328 | Msa0149750:intron | 25.0% |
!!! | CTTGCAATTTTAATAAAGCT+AGG | + | chr1_4:10645447-10645466 | None:intergenic | 25.0% |
!!! | CTTACTTGCTATTGAATAAT+GGG | + | chr1_4:10645532-10645551 | None:intergenic | 25.0% |
!!! | TCTTACTTGCTATTGAATAA+TGG | + | chr1_4:10645533-10645552 | None:intergenic | 25.0% |
!! | TGATTATTACATAAAAGCAC+TGG | - | chr1_4:10645562-10645581 | Msa0149750:intron | 25.0% |
!! | AAATTGATCATTTGGCTTAA+AGG | - | chr1_4:10645743-10645762 | Msa0149750:intron | 25.0% |
! | AATTGCATATGAAGAAATGA+TGG | + | chr1_4:10645800-10645819 | None:intergenic | 25.0% |
! | CTTTCAAACTTTCTTTAAGT+CGG | - | chr1_4:10645959-10645978 | Msa0149750:intron | 25.0% |
!! | ATTCAATTCATTAAGTTGCT+AGG | - | chr1_4:10646035-10646054 | Msa0149750:intron | 25.0% |
! | AATATAATAAATCCTAGGTC+GGG | + | chr1_4:10646111-10646130 | None:intergenic | 25.0% |
! | GAATATAATAAATCCTAGGT+CGG | + | chr1_4:10646112-10646131 | None:intergenic | 25.0% |
! | TGAATTAAGGACACTATAAA+AGG | + | chr1_4:10646156-10646175 | None:intergenic | 25.0% |
!!! | TTTGGACTAGTATGATAAAT+TGG | - | chr1_4:10641363-10641382 | Msa0149750:intron | 25.0% |
!!! | GAATTGTGTTTTGTTTGTAA+TGG | + | chr1_4:10646577-10646596 | None:intergenic | 25.0% |
! | ATGATGATATTAAACGTGTA+AGG | - | chr1_4:10642304-10642323 | Msa0149750:intron | 25.0% |
! | CTGAACAATTCTAAATATTC+AGG | + | chr1_4:10647461-10647480 | None:intergenic | 25.0% |
!! | CTGAATATTTAGAATTGTTC+AGG | - | chr1_4:10647459-10647478 | Msa0149750:five_prime_UTR | 25.0% |
ACATACACTCATGAATGATA+TGG | + | chr1_4:10632080-10632099 | None:intergenic | 30.0% | |
!! | TATTTGGGGTAGTTATTTTC+CGG | + | chr1_4:10632133-10632152 | None:intergenic | 30.0% |
AATAACTACCCCAAATAAAC+CGG | - | chr1_4:10632136-10632155 | Msa0149750:CDS | 30.0% | |
TTTCTGTGAGTTTACAACAA+TGG | - | chr1_4:10632390-10632409 | Msa0149750:CDS | 30.0% | |
CAATATTGACACTCCAATAA+TGG | - | chr1_4:10632567-10632586 | Msa0149750:CDS | 30.0% | |
TCCAATAATGGTTAGAGATT+TGG | - | chr1_4:10632579-10632598 | Msa0149750:CDS | 30.0% | |
TCCAAATCTCTAACCATTAT+TGG | + | chr1_4:10632583-10632602 | None:intergenic | 30.0% | |
! | ACTGTGTATGAATAGTTTGT+TGG | - | chr1_4:10632708-10632727 | Msa0149750:CDS | 30.0% |
!! | CTGTGTATGAATAGTTTGTT+GGG | - | chr1_4:10632709-10632728 | Msa0149750:CDS | 30.0% |
AAAATAAGAGACGAGAAAAG+AGG | - | chr1_4:10632764-10632783 | Msa0149750:CDS | 30.0% | |
! | TGAACACACAATATTTTACG+TGG | - | chr1_4:10632790-10632809 | Msa0149750:CDS | 30.0% |
TACCACTCTCTCTTATAAAT+AGG | - | chr1_4:10632919-10632938 | Msa0149750:CDS | 30.0% | |
AATACAAACTAACACAACCT+AGG | - | chr1_4:10632944-10632963 | Msa0149750:CDS | 30.0% | |
AATAACAACACAATAGTGAG+AGG | + | chr1_4:10633012-10633031 | None:intergenic | 30.0% | |
TGCTCCTATATTTATACATG+AGG | - | chr1_4:10633061-10633080 | Msa0149750:CDS | 30.0% | |
AACAAAAATTGCAAGCAAGT+TGG | - | chr1_4:10633098-10633117 | Msa0149750:CDS | 30.0% | |
ATATTATATGCACCGAAAGA+AGG | - | chr1_4:10633122-10633141 | Msa0149750:intron | 30.0% | |
ATTATGCATGGAACAGTAAA+AGG | + | chr1_4:10633189-10633208 | None:intergenic | 30.0% | |
ATTGAAATCAGTCTTCAAGT+GGG | + | chr1_4:10633248-10633267 | None:intergenic | 30.0% | |
TATTTGGATGCAAAGGTTAA+TGG | + | chr1_4:10633610-10633629 | None:intergenic | 30.0% | |
!!! | TATGTTGATTCAGATTTTGC+AGG | + | chr1_4:10633780-10633799 | None:intergenic | 30.0% |
AGAATCATGAGGTACATAAA+AGG | + | chr1_4:10633855-10633874 | None:intergenic | 30.0% | |
ATGCTGTTAAAAGAATCATG+AGG | + | chr1_4:10633866-10633885 | None:intergenic | 30.0% | |
TACATATCATGGCATACATA+AGG | - | chr1_4:10633958-10633977 | Msa0149750:intron | 30.0% | |
! | TTTAAAATTCACAGGAAGTG+GGG | - | chr1_4:10634061-10634080 | Msa0149750:intron | 30.0% |
!!! | TATCATTTTGCTGTTGTATG+TGG | + | chr1_4:10634306-10634325 | None:intergenic | 30.0% |
! | TAATTAGCCTCGATTACAAT+AGG | + | chr1_4:10634379-10634398 | None:intergenic | 30.0% |
AGAAATTTATATGCTCCAAC+CGG | + | chr1_4:10634510-10634529 | None:intergenic | 30.0% | |
! | CTTCAATGAGATATTTTCTC+CGG | + | chr1_4:10634642-10634661 | None:intergenic | 30.0% |
!! | GTATACCCATTTGTTTTCAA+TGG | - | chr1_4:10634748-10634767 | Msa0149750:intron | 30.0% |
GAAAGCCATTGAAAACAAAT+GGG | + | chr1_4:10634756-10634775 | None:intergenic | 30.0% | |
TTCAGAAGAATCACTTTCTT+TGG | - | chr1_4:10635048-10635067 | Msa0149750:intron | 30.0% | |
TATTCTTCTCTACATGTGTT+TGG | + | chr1_4:10635310-10635329 | None:intergenic | 30.0% | |
AATAAATCGATCACCATCAA+CGG | + | chr1_4:10635383-10635402 | None:intergenic | 30.0% | |
TGACTATTCCAGAAGATTAT+GGG | + | chr1_4:10635719-10635738 | None:intergenic | 30.0% | |
ATGACTATTCCAGAAGATTA+TGG | + | chr1_4:10635720-10635739 | None:intergenic | 30.0% | |
AGTAATCTATACATGCTTCT+AGG | + | chr1_4:10636054-10636073 | None:intergenic | 30.0% | |
TTTATTGTCTGTTGGACAAT+TGG | + | chr1_4:10636166-10636185 | None:intergenic | 30.0% | |
ATCAGATTAAAGATGCATGA+TGG | + | chr1_4:10636240-10636259 | None:intergenic | 30.0% | |
TGTTGGAATATCAAGAAGAA+TGG | + | chr1_4:10636516-10636535 | None:intergenic | 30.0% | |
TTGAGAAAATAGCGTATTCA+GGG | - | chr1_4:10636884-10636903 | Msa0149750:intron | 30.0% | |
CATGTGGAAATTGAAGATAA+GGG | + | chr1_4:10637195-10637214 | Msa0149760:intron | 30.0% | |
! | TTTGAGATAGAGAAGTTCAA+CGG | + | chr1_4:10637230-10637249 | Msa0149760:intron | 30.0% |
!! | AATGTTTGGTGTAAAAACCA+TGG | + | chr1_4:10637261-10637280 | Msa0149760:intron | 30.0% |
AAAAATCTTAGTATGCTCTG+TGG | + | chr1_4:10637354-10637373 | Msa0149760:intron | 30.0% | |
AAAATAAGAGACGAGAAAAG+AGG | - | chr1_4:10632764-10632783 | Msa0149750:CDS | 30.0% | |
! | TGAACACACAATATTTTACG+TGG | - | chr1_4:10632790-10632809 | Msa0149750:CDS | 30.0% |
TACCACTCTCTCTTATAAAT+AGG | - | chr1_4:10632919-10632938 | Msa0149750:CDS | 30.0% | |
AATACAAACTAACACAACCT+AGG | - | chr1_4:10632944-10632963 | Msa0149750:CDS | 30.0% | |
AATAACAACACAATAGTGAG+AGG | + | chr1_4:10633012-10633031 | None:intergenic | 30.0% | |
ACTTCCTCATGTATAAATAG+AGG | + | chr1_4:10637780-10637799 | None:intergenic | 30.0% | |
AACAAAAATTGCAAGCAAGT+TGG | - | chr1_4:10633098-10633117 | Msa0149750:CDS | 30.0% | |
ATATTATATGCACCGAAAGA+AGG | - | chr1_4:10633122-10633141 | Msa0149750:intron | 30.0% | |
ATTATGCATGGAACAGTAAA+AGG | + | chr1_4:10633189-10633208 | None:intergenic | 30.0% | |
TGTTCTCAGAAAACATGTTA+AGG | - | chr1_4:10638137-10638156 | Msa0149750:intron | 30.0% | |
!! | TGTGCCAATTTATTTTTCAC+AGG | + | chr1_4:10638209-10638228 | None:intergenic | 30.0% |
CATATCATAACAGTTGTAGT+AGG | - | chr1_4:10638359-10638378 | Msa0149750:intron | 30.0% | |
TATCATAACAGTTGTAGTAG+GGG | - | chr1_4:10638361-10638380 | Msa0149750:intron | 30.0% | |
ACTGTAAGTGAAAATAGAGA+TGG | + | chr1_4:10638465-10638484 | None:intergenic | 30.0% | |
! | AATTTCTTTTGCCAGTGATT+GGG | + | chr1_4:10638517-10638536 | None:intergenic | 30.0% |
! | TAATTTCTTTTGCCAGTGAT+TGG | + | chr1_4:10638518-10638537 | None:intergenic | 30.0% |
!!! | TGATACATATTTTAGCAACG+AGG | - | chr1_4:10638634-10638653 | Msa0149750:intron | 30.0% |
!!! | GATACATATTTTAGCAACGA+GGG | - | chr1_4:10638635-10638654 | Msa0149750:intron | 30.0% |
TCAATTCTTGAAGAGTAAAG+GGG | + | chr1_4:10638672-10638691 | None:intergenic | 30.0% | |
CATCAATTCTTGAAGAGTAA+AGG | + | chr1_4:10638674-10638693 | None:intergenic | 30.0% | |
CTTTACTCTTCAAGAATTGA+TGG | - | chr1_4:10638672-10638691 | Msa0149750:intron | 30.0% | |
TCAAATAAATGGCTAGAACT+TGG | + | chr1_4:10638866-10638885 | None:intergenic | 30.0% | |
TTATTTAGTAGCTGATACGT+TGG | - | chr1_4:10639291-10639310 | Msa0149750:intron | 30.0% | |
CAAACATATATGTGTGCTTT+AGG | - | chr1_4:10639351-10639370 | Msa0149750:intron | 30.0% | |
! | CTTTAGGCCTTAATAAGTTT+TGG | - | chr1_4:10639367-10639386 | Msa0149750:intron | 30.0% |
!!! | AGGCCTATAATTTTTGAAGT+AGG | - | chr1_4:10639532-10639551 | Msa0149750:intron | 30.0% |
TGGCCTACTTCAAAAATTAT+AGG | + | chr1_4:10639538-10639557 | Msa0149780:CDS | 30.0% | |
!!! | TATAATTTTTGAAGTAGGCC+AGG | - | chr1_4:10639537-10639556 | Msa0149750:intron | 30.0% |
ATATCATTATGGGTGGAAAT+GGG | + | chr1_4:10639595-10639614 | Msa0149780:intron | 30.0% | |
TATATCATTATGGGTGGAAA+TGG | + | chr1_4:10639596-10639615 | Msa0149780:intron | 30.0% | |
GTCATATATATCATTATGGG+TGG | + | chr1_4:10639602-10639621 | Msa0149780:intron | 30.0% | |
ATCAGATTCAAAAGATCGTT+TGG | + | chr1_4:10639782-10639801 | Msa0149780:CDS | 30.0% | |
GAATTCAGTAATGTTGTTGA+TGG | + | chr1_4:10639948-10639967 | None:intergenic | 30.0% | |
GAATGATAGGTTTATTTCCA+TGG | + | chr1_4:10640263-10640282 | None:intergenic | 30.0% | |
GGAAATAAACCTATCATTCT+CGG | - | chr1_4:10640264-10640283 | Msa0149750:intron | 30.0% | |
TGGACATATTAAATTCTTGG+TGG | - | chr1_4:10640497-10640516 | Msa0149750:intron | 30.0% | |
ATGATCACAAAATTCCCTTT+GGG | + | chr1_4:10640710-10640729 | None:intergenic | 30.0% | |
AATGATCACAAAATTCCCTT+TGG | + | chr1_4:10640711-10640730 | None:intergenic | 30.0% | |
! | AGGGAATTTTGTGATCATTA+TGG | - | chr1_4:10640712-10640731 | Msa0149750:intron | 30.0% |
! | CGGAACAATTTAGAATATTC+AGG | + | chr1_4:10640815-10640834 | None:intergenic | 30.0% |
GTATGTTATCTTGCATTGAA+AGG | - | chr1_4:10640870-10640889 | Msa0149750:intron | 30.0% | |
!!! | TGCTTTGTTTTTGTTAGACT+CGG | - | chr1_4:10640924-10640943 | Msa0149750:intron | 30.0% |
! | TAATGTTGTTACATTGACTG+TGG | - | chr1_4:10640988-10641007 | Msa0149750:CDS | 30.0% |
! | AATGTTGTTACATTGACTGT+GGG | - | chr1_4:10640989-10641008 | Msa0149750:CDS | 30.0% |
! | TTCATAGTAATAACTTGTCG+TGG | + | chr1_4:10641155-10641174 | None:intergenic | 30.0% |
ATGGAATCTTTGATGAATAG+GGG | + | chr1_4:10641661-10641680 | None:intergenic | 30.0% | |
GATGGAATCTTTGATGAATA+GGG | + | chr1_4:10641662-10641681 | None:intergenic | 30.0% | |
TGATGGAATCTTTGATGAAT+AGG | + | chr1_4:10641663-10641682 | None:intergenic | 30.0% | |
TGGGGATATTAAATTCTTAG+TGG | - | chr1_4:10642230-10642249 | Msa0149750:intron | 30.0% | |
CGTGTATAAGCTTAATGAAA+AGG | - | chr1_4:10642332-10642351 | Msa0149750:intron | 30.0% | |
TTAATGAAAAGGAGAAGAAG+TGG | - | chr1_4:10642343-10642362 | Msa0149750:intron | 30.0% | |
! | TTCATTTTCTGCTTCTGTTT+CGG | - | chr1_4:10642416-10642435 | Msa0149750:intron | 30.0% |
GTATGTTATCTTGCATTGAA+AGG | - | chr1_4:10640870-10640889 | Msa0149750:intron | 30.0% | |
! | TAATGTTGTTACATTGACTG+TGG | - | chr1_4:10640988-10641007 | Msa0149750:CDS | 30.0% |
! | AATGTTGTTACATTGACTGT+GGG | - | chr1_4:10640989-10641008 | Msa0149750:CDS | 30.0% |
TCAACAATAAAATGAAGAGC+TGG | + | chr1_4:10642829-10642848 | None:intergenic | 30.0% | |
! | GCTCTTCATTTTATTGTTGA+TGG | - | chr1_4:10642829-10642848 | Msa0149750:intron | 30.0% |
CAAAACATATAGTCTGCAAA+AGG | + | chr1_4:10642879-10642898 | None:intergenic | 30.0% | |
ACATTCATATGAAAAGATGC+TGG | - | chr1_4:10642924-10642943 | Msa0149750:intron | 30.0% | |
ATCTCAACCAAGTTTACATA+CGG | - | chr1_4:10643096-10643115 | Msa0149750:intron | 30.0% | |
!!! | TGGTTCTGTTAGTTTTTTGT+TGG | - | chr1_4:10643126-10643145 | Msa0149750:intron | 30.0% |
TAACAACACCATAATAATGC+AGG | + | chr1_4:10643155-10643174 | None:intergenic | 30.0% | |
TTGAATATCATCATTGTTCC+TGG | - | chr1_4:10643335-10643354 | Msa0149750:intron | 30.0% | |
ATTACAAACCTTACTTGAAG+AGG | - | chr1_4:10643380-10643399 | Msa0149750:intron | 30.0% | |
CGACTTATTAATTCTTCATG+AGG | - | chr1_4:10643439-10643458 | Msa0149750:intron | 30.0% | |
GTCCTAATACAAACAAAACA+TGG | - | chr1_4:10643729-10643748 | Msa0149750:intron | 30.0% | |
ACAAACAAAACATGGAAAAG+AGG | - | chr1_4:10643737-10643756 | Msa0149750:intron | 30.0% | |
TTAGTGAAATCAAGTGTTTC+TGG | - | chr1_4:10643856-10643875 | Msa0149750:intron | 30.0% | |
!! | TTTCTGGTTATATCCTTCTT+TGG | - | chr1_4:10643872-10643891 | Msa0149750:intron | 30.0% |
TGACATCTAAAAACCAAAGA+AGG | + | chr1_4:10643888-10643907 | None:intergenic | 30.0% | |
AAACTATCCTACTTCAACTA+AGG | + | chr1_4:10644037-10644056 | None:intergenic | 30.0% | |
TCTTAGTACCATGATAAGTT+AGG | + | chr1_4:10644106-10644125 | None:intergenic | 30.0% | |
CTGGCTAAATTATATTGATG+AGG | - | chr1_4:10644186-10644205 | Msa0149750:intron | 30.0% | |
!! | CAAAAGCTTTTTAGTGTTGT+AGG | - | chr1_4:10644313-10644332 | Msa0149750:intron | 30.0% |
TAATCTACGATTATCACCAT+AGG | + | chr1_4:10644705-10644724 | None:intergenic | 30.0% | |
ATGTTAGAGGTTAGATTGTT+AGG | + | chr1_4:10644763-10644782 | None:intergenic | 30.0% | |
! | TTTTTGTAGGCAAATGTTAG+AGG | + | chr1_4:10644776-10644795 | None:intergenic | 30.0% |
! | AAGTAAGAGATTTGGAATGT+AGG | + | chr1_4:10644868-10644887 | None:intergenic | 30.0% |
GAGAGCAGTAAATGTAAAAA+TGG | + | chr1_4:10644963-10644982 | None:intergenic | 30.0% | |
TTTACATTTACTGCTCTCAA+TGG | - | chr1_4:10644965-10644984 | Msa0149750:intron | 30.0% | |
AAATTCTTTCGAGGTGATAT+AGG | + | chr1_4:10645151-10645170 | None:intergenic | 30.0% | |
!! | TGAAAGTTTAAGGTTGATGT+TGG | + | chr1_4:10645217-10645236 | None:intergenic | 30.0% |
!! | TGAATAATGGGTTGTAAACT+AGG | + | chr1_4:10645520-10645539 | None:intergenic | 30.0% |
GTAGCTAACATAAATTGGAT+AGG | - | chr1_4:10645596-10645615 | Msa0149750:intron | 30.0% | |
CTAACATAAATTGGATAGGA+AGG | - | chr1_4:10645600-10645619 | Msa0149750:intron | 30.0% | |
! | AATTTTCTGAGTCATGACTT+GGG | - | chr1_4:10645665-10645684 | Msa0149750:intron | 30.0% |
! | AAGAAATGATGGAAAAGTAG+TGG | + | chr1_4:10645789-10645808 | None:intergenic | 30.0% |
ATATAATAAATCCTAGGTCG+GGG | + | chr1_4:10646110-10646129 | None:intergenic | 30.0% | |
AAATGTTACGATGGTGATTT+GGG | + | chr1_4:10646524-10646543 | None:intergenic | 30.0% | |
AAAATGTTACGATGGTGATT+TGG | + | chr1_4:10646525-10646544 | None:intergenic | 30.0% | |
TGATGGTTAAAATGTTACGA+TGG | + | chr1_4:10646533-10646552 | None:intergenic | 30.0% | |
! | GTAATGGAATAAATGTTGAG+TGG | + | chr1_4:10646561-10646580 | None:intergenic | 30.0% |
! | TGTGTAATTTTAAGCAACCA+AGG | + | chr1_4:10646651-10646670 | None:intergenic | 30.0% |
AAAATTACACAAAACTCCAC+TGG | - | chr1_4:10646660-10646679 | Msa0149750:intron | 30.0% | |
AATGGTAGGTTTATTTCCAT+GGG | + | chr1_4:10646892-10646911 | None:intergenic | 30.0% | |
ATTGACGTGTTTAAGCTTAA+TGG | - | chr1_4:10647227-10647246 | Msa0149750:intron | 30.0% | |
TCATGAATGATATGGATGGA+TGG | + | chr1_4:10632072-10632091 | None:intergenic | 35.0% | |
ACACTCATGAATGATATGGA+TGG | + | chr1_4:10632076-10632095 | None:intergenic | 35.0% | |
! | TCTTTCTCTCCTATCTCTTT+TGG | - | chr1_4:10632101-10632120 | Msa0149750:CDS | 35.0% |
ATAACTACCCCAAATAAACC+GGG | - | chr1_4:10632137-10632156 | Msa0149750:CDS | 35.0% | |
TGAATAAGCCCGGTTTATTT+GGG | + | chr1_4:10632148-10632167 | None:intergenic | 35.0% | |
GTTAGTTATCTGAATAAGCC+CGG | + | chr1_4:10632158-10632177 | None:intergenic | 35.0% | |
! | AAGGTACATACCAGTTCTTT+TGG | + | chr1_4:10632251-10632270 | None:intergenic | 35.0% |
!!! | TTTCTCCCCTTTTTTGTTGA+GGG | + | chr1_4:10632820-10632839 | None:intergenic | 35.0% |
!! | TTTTCTCCCCTTTTTTGTTG+AGG | + | chr1_4:10632821-10632840 | None:intergenic | 35.0% |
AGTAGAGAACTTTCACTATG+TGG | - | chr1_4:10632853-10632872 | Msa0149750:CDS | 35.0% | |
CACTATGTGGAAGAAATTAC+AGG | - | chr1_4:10632866-10632885 | Msa0149750:CDS | 35.0% | |
CTCCTATTTATAAGAGAGAG+TGG | + | chr1_4:10632924-10632943 | None:intergenic | 35.0% | |
TCCATGCATAATTGTCAACA+TGG | - | chr1_4:10633197-10633216 | Msa0149750:intron | 35.0% | |
ACCATGTTGACAATTATGCA+TGG | + | chr1_4:10633201-10633220 | None:intergenic | 35.0% | |
ATGCATAATTGTCAACATGG+TGG | - | chr1_4:10633200-10633219 | Msa0149750:intron | 35.0% | |
TGCATAATTGTCAACATGGT+GGG | - | chr1_4:10633201-10633220 | Msa0149750:intron | 35.0% | |
GATTGAAATCAGTCTTCAAG+TGG | + | chr1_4:10633249-10633268 | None:intergenic | 35.0% | |
TACATCTGCTAGGTTATCTT+TGG | - | chr1_4:10633413-10633432 | Msa0149750:intron | 35.0% | |
! | TCATTTTGTTCGAGAAGTAG+TGG | + | chr1_4:10633472-10633491 | None:intergenic | 35.0% |
AGCTACAACACTTTGTAACT+TGG | - | chr1_4:10633683-10633702 | Msa0149750:intron | 35.0% | |
! | TCAGGTGTTGCAATATGTTT+CGG | + | chr1_4:10633828-10633847 | None:intergenic | 35.0% |
ACAGAAAAGACAGGAAGATT+TGG | + | chr1_4:10634157-10634176 | None:intergenic | 35.0% | |
! | ATCCCTAAAATCTTGTTTGC+TGG | - | chr1_4:10634191-10634210 | Msa0149750:intron | 35.0% |
! | GACCAGCAAACAAGATTTTA+GGG | + | chr1_4:10634196-10634215 | None:intergenic | 35.0% |
GAGTTCGATATGAAAGACTT+GGG | + | chr1_4:10634218-10634237 | None:intergenic | 35.0% | |
! | ACCTTTTGTAGTACGTACAA+TGG | - | chr1_4:10634342-10634361 | Msa0149750:intron | 35.0% |
ACCATTGTACGTACTACAAA+AGG | + | chr1_4:10634346-10634365 | None:intergenic | 35.0% | |
AAATCTCTTGTACCAACATC+TGG | - | chr1_4:10634409-10634428 | Msa0149750:intron | 35.0% | |
AATCTCTTGTACCAACATCT+GGG | - | chr1_4:10634410-10634429 | Msa0149750:intron | 35.0% | |
CTTTAGACTGTACAGAGATT+TGG | - | chr1_4:10634439-10634458 | Msa0149750:intron | 35.0% | |
!! | GAAAAGAAAACTTGGTTTGC+AGG | + | chr1_4:10634469-10634488 | None:intergenic | 35.0% |
GGAACAAGGAAAAGAAAACT+TGG | + | chr1_4:10634477-10634496 | None:intergenic | 35.0% | |
!! | GTAAAGACTGCTTTTCTTCA+TGG | + | chr1_4:10634545-10634564 | None:intergenic | 35.0% |
TACTACTATCAGAGTAGTGT+TGG | + | chr1_4:10634609-10634628 | None:intergenic | 35.0% | |
ATAGTAGTAAGTCTGACAAC+CGG | - | chr1_4:10634620-10634639 | Msa0149750:intron | 35.0% | |
AAAGGATATGCTCAGAAAGA+AGG | + | chr1_4:10634671-10634690 | None:intergenic | 35.0% | |
GTATACAAGATCAAACGTGA+TGG | + | chr1_4:10634734-10634753 | None:intergenic | 35.0% | |
GGAAAGCCATTGAAAACAAA+TGG | + | chr1_4:10634757-10634776 | None:intergenic | 35.0% | |
!! | GAACTTGTTGAACTTCCAAA+GGG | + | chr1_4:10634782-10634801 | None:intergenic | 35.0% |
CTTACATAGGAACAAGACAT+GGG | + | chr1_4:10634804-10634823 | None:intergenic | 35.0% | |
!! | TGAACCTTCAACTTTTCAAG+AGG | + | chr1_4:10634885-10634904 | None:intergenic | 35.0% |
GTTATGCTGACAATGTTAAG+GGG | + | chr1_4:10635210-10635229 | None:intergenic | 35.0% | |
GGTTATGCTGACAATGTTAA+GGG | + | chr1_4:10635211-10635230 | None:intergenic | 35.0% | |
TCCAGGAAATGTATCTTCTT+GGG | + | chr1_4:10635232-10635251 | None:intergenic | 35.0% | |
AAGATACATTTCCTGGACTT+TGG | - | chr1_4:10635235-10635254 | Msa0149750:intron | 35.0% | |
AGATACATTTCCTGGACTTT+GGG | - | chr1_4:10635236-10635255 | Msa0149750:intron | 35.0% | |
GAGTTGTACATTACATACAC+AGG | - | chr1_4:10635280-10635299 | Msa0149750:intron | 35.0% | |
TGTAGAGAAGAATAATCTGC+TGG | - | chr1_4:10635316-10635335 | Msa0149750:intron | 35.0% | |
!! | GTAAACAAGAGGGTATTGTA+AGG | + | chr1_4:10635552-10635571 | None:intergenic | 35.0% |
AATGGAGGAGAATATGTAGA+TGG | + | chr1_4:10635592-10635611 | None:intergenic | 35.0% | |
GGAAGAAAATTAAGTGCTTG+AGG | + | chr1_4:10635621-10635640 | None:intergenic | 35.0% | |
CACAAATAGAGCTTGAAACT+GGG | + | chr1_4:10635642-10635661 | None:intergenic | 35.0% | |
AGATGTGTTTCCAGTATTCA+AGG | + | chr1_4:10635674-10635693 | None:intergenic | 35.0% | |
ACATCTGACTTCTTCTTGAT+CGG | - | chr1_4:10635688-10635707 | Msa0149750:intron | 35.0% | |
CTTAATACATTCTGATGCGT+GGG | + | chr1_4:10635794-10635813 | None:intergenic | 35.0% | |
ACTTAATACATTCTGATGCG+TGG | + | chr1_4:10635795-10635814 | None:intergenic | 35.0% | |
GGAATCTTGAAAGTAGTGAA+AGG | + | chr1_4:10636111-10636130 | None:intergenic | 35.0% | |
GGTACTGTTCGAAAAATACA+AGG | + | chr1_4:10636219-10636238 | None:intergenic | 35.0% | |
CATAGGAGTAAAACCAATCT+CGG | - | chr1_4:10636328-10636347 | Msa0149750:intron | 35.0% | |
AATATCAAATGCTACGGTTG+TGG | + | chr1_4:10636564-10636583 | None:intergenic | 35.0% | |
!! | ATGAGTTGATCATACGAATC+TGG | - | chr1_4:10636798-10636817 | Msa0149750:intron | 35.0% |
!! | TACGCTATTTTCTCAACTCA+CGG | + | chr1_4:10636880-10636899 | None:intergenic | 35.0% |
GTTGAGAAAATAGCGTATTC+AGG | - | chr1_4:10636883-10636902 | Msa0149750:intron | 35.0% | |
GAAGACAACAAAGGAGATTT+GGG | + | chr1_4:10637024-10637043 | None:intergenic | 35.0% | |
AGAAGACAACAAAGGAGATT+TGG | + | chr1_4:10637025-10637044 | None:intergenic | 35.0% | |
TGCTGAAAAGAAGACAACAA+AGG | + | chr1_4:10637033-10637052 | Msa0149760:CDS | 35.0% | |
TGACGAAAAGTGGAAAGAAA+TGG | + | chr1_4:10637114-10637133 | Msa0149760:CDS | 35.0% | |
CCATGTGGAAATTGAAGATA+AGG | + | chr1_4:10637196-10637215 | Msa0149760:intron | 35.0% | |
CCTTATCTTCAATTTCCACA+TGG | - | chr1_4:10637193-10637212 | Msa0149750:intron | 35.0% | |
TTGAGATAGAGAAGTTCAAC+GGG | + | chr1_4:10637229-10637248 | Msa0149760:intron | 35.0% | |
! | TATCTCAAATTTTGCTGCCA+TGG | - | chr1_4:10637241-10637260 | Msa0149750:intron | 35.0% |
!!! | TTTCTCCCCTTTTTTGTTGA+GGG | + | chr1_4:10632820-10632839 | None:intergenic | 35.0% |
!! | TTTTCTCCCCTTTTTTGTTG+AGG | + | chr1_4:10632821-10632840 | None:intergenic | 35.0% |
AGTAGAGAACTTTCACTATG+TGG | - | chr1_4:10632853-10632872 | Msa0149750:CDS | 35.0% | |
CACTATGTGGAAGAAATTAC+AGG | - | chr1_4:10632866-10632885 | Msa0149750:CDS | 35.0% | |
CTCCTATTTATAAGAGAGAG+TGG | + | chr1_4:10632924-10632943 | None:intergenic | 35.0% | |
TGCTCCTCTATTTATACATG+AGG | - | chr1_4:10637773-10637792 | Msa0149750:intron | 35.0% | |
TCCATGCATAATTGTCAACA+TGG | - | chr1_4:10633197-10633216 | Msa0149750:intron | 35.0% | |
ACCATGTTGACAATTATGCA+TGG | + | chr1_4:10633201-10633220 | None:intergenic | 35.0% | |
ATGCATAATTGTCAACATGG+TGG | - | chr1_4:10633200-10633219 | Msa0149750:intron | 35.0% | |
TGCATAATTGTCAACATGGT+GGG | - | chr1_4:10633201-10633220 | Msa0149750:intron | 35.0% | |
GAAAAGAAGCTCAACTATGT+TGG | + | chr1_4:10637949-10637968 | None:intergenic | 35.0% | |
CAGTAACACACATCATTAGA+TGG | + | chr1_4:10638090-10638109 | None:intergenic | 35.0% | |
!! | TATTTGGTGTGCAATATTGC+AGG | - | chr1_4:10638314-10638333 | Msa0149750:intron | 35.0% |
!! | ATTTGGTGTGCAATATTGCA+GGG | - | chr1_4:10638315-10638334 | Msa0149750:intron | 35.0% |
! | ATTTTGTATGGAAAGCTTGC+TGG | - | chr1_4:10638939-10638958 | Msa0149750:intron | 35.0% |
!! | TTTTGTATGGAAAGCTTGCT+GGG | - | chr1_4:10638940-10638959 | Msa0149750:intron | 35.0% |
! | ACACAAAGCGTTCATATGAT+TGG | - | chr1_4:10639268-10639287 | Msa0149750:intron | 35.0% |
ATGTAAGCCTACTCCTAAAT+AGG | + | chr1_4:10639393-10639412 | Msa0149770:CDS | 35.0% | |
GTTAGGCCTTAGCATAAAAT+AGG | - | chr1_4:10639418-10639437 | Msa0149750:intron | 35.0% | |
!! | GCTTCATCAGGCTTTTAAAA+AGG | - | chr1_4:10639460-10639479 | Msa0149750:intron | 35.0% |
! | TTGTTTCTCGCTTTCTCTAT+CGG | + | chr1_4:10639629-10639648 | Msa0149780:intron | 35.0% |
!!! | GTTTCTTTTTTGGAAGGAGA+AGG | + | chr1_4:10639662-10639681 | Msa0149780:intron | 35.0% |
!!! | TAGGGTGTTTCTTTTTTGGA+AGG | + | chr1_4:10639668-10639687 | Msa0149780:intron | 35.0% |
!!! | AGACTAGGGTGTTTCTTTTT+TGG | + | chr1_4:10639672-10639691 | Msa0149780:intron | 35.0% |
TTCAGAAAGTGACTAGACTA+GGG | + | chr1_4:10639686-10639705 | Msa0149780:intron | 35.0% | |
CTGAAGATGAAGAAGAAAAG+AGG | - | chr1_4:10639701-10639720 | Msa0149750:intron | 35.0% | |
! | TCCGATCAATTTGTTCCAAT+TGG | - | chr1_4:10639840-10639859 | Msa0149750:intron | 35.0% |
GCCAATTGGAACAAATTGAT+CGG | + | chr1_4:10639844-10639863 | None:intergenic | 35.0% | |
GAAGGTTATACCTAACATGT+CGG | - | chr1_4:10640344-10640363 | Msa0149750:intron | 35.0% | |
! | GGAGACATTTGTGTTTTCAA+AGG | - | chr1_4:10640375-10640394 | Msa0149750:intron | 35.0% |
TATTGTGTACCACATAAGGT+TGG | + | chr1_4:10640401-10640420 | None:intergenic | 35.0% | |
AATCATTATCATACCAACGG+TGG | + | chr1_4:10640557-10640576 | None:intergenic | 35.0% | |
GGTAAAGTTGGCGAATATAT+GGG | - | chr1_4:10640620-10640639 | Msa0149750:intron | 35.0% | |
!!! | ATGGGATAGAGTTTTGTTCT+TGG | - | chr1_4:10640638-10640657 | Msa0149750:intron | 35.0% |
!!! | TGGGATAGAGTTTTGTTCTT+GGG | - | chr1_4:10640639-10640658 | Msa0149750:intron | 35.0% |
!!! | ATAGAGTTTTGTTCTTGGGT+AGG | - | chr1_4:10640643-10640662 | Msa0149750:intron | 35.0% |
!!! | GTATCGTAAGAGCTCTTTTT+TGG | - | chr1_4:10640751-10640770 | Msa0149750:intron | 35.0% |
!!! | TAAGAGCTCTTTTTTGGACT+TGG | - | chr1_4:10640757-10640776 | Msa0149750:intron | 35.0% |
!!! | TCTTTTTTGGACTTGGATGA+TGG | - | chr1_4:10640764-10640783 | Msa0149750:intron | 35.0% |
TAATTCAGCTTCTTTATCCG+AGG | + | chr1_4:10640842-10640861 | None:intergenic | 35.0% | |
! | CTGTGGGTTTTTCTAACTAA+TGG | - | chr1_4:10641005-10641024 | Msa0149750:CDS | 35.0% |
TCTTCTTTCTTCCACAGAAA+GGG | + | chr1_4:10641440-10641459 | None:intergenic | 35.0% | |
ATCAGATTCAGAAGATCCTT+TGG | + | chr1_4:10641514-10641533 | None:intergenic | 35.0% | |
TCCGATCAATTTGTACCAAT+TGG | - | chr1_4:10641572-10641591 | Msa0149750:intron | 35.0% | |
GCCAATTGGTACAAATTGAT+CGG | + | chr1_4:10641576-10641595 | None:intergenic | 35.0% | |
ATAGAGGAATGGGAAATTGA+TGG | + | chr1_4:10641638-10641657 | None:intergenic | 35.0% | |
!!! | GAATGGAGTTTTGTTAGTGA+TGG | + | chr1_4:10641680-10641699 | None:intergenic | 35.0% |
TGTGTTTCGAGAGGTTATTA+CGG | + | chr1_4:10641702-10641721 | None:intergenic | 35.0% | |
AAGATGAATGCAAGCCATAT+CGG | + | chr1_4:10641828-10641847 | None:intergenic | 35.0% | |
!! | AATTTGTTGAAGTCGAAGAC+GGG | + | chr1_4:10641856-10641875 | None:intergenic | 35.0% |
!! | GAATTTGTTGAAGTCGAAGA+CGG | + | chr1_4:10641857-10641876 | None:intergenic | 35.0% |
CAAATTCTCCCTTCTTCATT+TGG | - | chr1_4:10641870-10641889 | Msa0149750:intron | 35.0% | |
ATACCTTAAGAAAGCCATTG+CGG | - | chr1_4:10641963-10641982 | Msa0149750:intron | 35.0% | |
!!! | AATGGTAGGTTTTTTTCCGT+GGG | + | chr1_4:10641995-10642014 | None:intergenic | 35.0% |
GGAAAAAAACCTACCATTCT+CGG | - | chr1_4:10641997-10642016 | Msa0149750:intron | 35.0% | |
GACACAAATGTCTCCTAAAT+AGG | + | chr1_4:10642109-10642128 | None:intergenic | 35.0% | |
ACATTTGTGTCTTCAAAGGT+CGG | - | chr1_4:10642118-10642137 | Msa0149750:intron | 35.0% | |
TAAATTCTTAGTGGAGAGCA+AGG | - | chr1_4:10642239-10642258 | Msa0149750:intron | 35.0% | |
AAATTCTTAGTGGAGAGCAA+GGG | - | chr1_4:10642240-10642259 | Msa0149750:intron | 35.0% | |
TGGTTGAAGTTGGCTAATTT+AGG | - | chr1_4:10642363-10642382 | Msa0149750:intron | 35.0% | |
GGTTGAAGTTGGCTAATTTA+GGG | - | chr1_4:10642364-10642383 | Msa0149750:intron | 35.0% | |
GTTGAAGTTGGCTAATTTAG+GGG | - | chr1_4:10642365-10642384 | Msa0149750:intron | 35.0% | |
!!! | AGGGGATATAGTTTTGTTCT+TGG | - | chr1_4:10642383-10642402 | Msa0149750:intron | 35.0% |
!!! | GGGGATATAGTTTTGTTCTT+GGG | - | chr1_4:10642384-10642403 | Msa0149750:intron | 35.0% |
!!! | GGGATATAGTTTTGTTCTTG+GGG | - | chr1_4:10642385-10642404 | Msa0149750:intron | 35.0% |
AGAAGCAGAAAATGAACCAT+GGG | + | chr1_4:10642412-10642431 | None:intergenic | 35.0% | |
ATGATGACACAATTCCCTTT+GGG | + | chr1_4:10642453-10642472 | None:intergenic | 35.0% | |
AATGATGACACAATTCCCTT+TGG | + | chr1_4:10642454-10642473 | None:intergenic | 35.0% | |
AGGGAATTGTGTCATCATTA+TGG | - | chr1_4:10642455-10642474 | Msa0149750:intron | 35.0% | |
GGGAATTGTGTCATCATTAT+GGG | - | chr1_4:10642456-10642475 | Msa0149750:intron | 35.0% | |
!!! | GTATTGTGCAAGCTCTTTTT+TGG | - | chr1_4:10642497-10642516 | Msa0149750:intron | 35.0% |
!!! | TCTTTTTTGGACTTGGATGA+TGG | - | chr1_4:10640764-10640783 | Msa0149750:intron | 35.0% |
TATTCAGCATAGTCGATCAA+AGG | + | chr1_4:10642546-10642565 | None:intergenic | 35.0% | |
TGAAAAGATGCTGGAAAATG+AGG | - | chr1_4:10642933-10642952 | Msa0149750:intron | 35.0% | |
AATTAATAAGTCGGCTGTGT+GGG | + | chr1_4:10643432-10643451 | None:intergenic | 35.0% | |
TCTTATAAGTCCAACTCAGT+TGG | + | chr1_4:10643549-10643568 | None:intergenic | 35.0% | |
! | GAATTCTTTTAGCCTGTGTT+TGG | - | chr1_4:10643680-10643699 | Msa0149750:intron | 35.0% |
GTGTATGTTTACATTCACGA+TGG | + | chr1_4:10643790-10643809 | None:intergenic | 35.0% | |
CAGATTACCTTAGTTGAAGT+AGG | - | chr1_4:10644027-10644046 | Msa0149750:intron | 35.0% | |
CATGAGAGCTCAGTTTAATT+AGG | - | chr1_4:10644076-10644095 | Msa0149750:intron | 35.0% | |
TAGGTAAGCCTAACTTATCA+TGG | - | chr1_4:10644095-10644114 | Msa0149750:intron | 35.0% | |
ATCTTCCTTTGATGTGTGTT+GGG | - | chr1_4:10644356-10644375 | Msa0149750:intron | 35.0% | |
! | TTTTACCCAACACACATCAA+AGG | + | chr1_4:10644364-10644383 | None:intergenic | 35.0% |
TGGGTAAAACAAGCAATTAC+TGG | - | chr1_4:10644375-10644394 | Msa0149750:intron | 35.0% | |
TAGAAGTTCTCAGATCACAA+GGG | + | chr1_4:10644417-10644436 | None:intergenic | 35.0% | |
ATAGAAGTTCTCAGATCACA+AGG | + | chr1_4:10644418-10644437 | None:intergenic | 35.0% | |
AAAGGTTATCTTGTGCCTTT+AGG | - | chr1_4:10644593-10644612 | Msa0149750:intron | 35.0% | |
AAGGTTATCTTGTGCCTTTA+GGG | - | chr1_4:10644594-10644613 | Msa0149750:intron | 35.0% | |
TATCTTAACATGTGCCCTAA+AGG | + | chr1_4:10644611-10644630 | None:intergenic | 35.0% | |
TTATTATTGTGCGCATCCTA+TGG | - | chr1_4:10644644-10644663 | Msa0149750:intron | 35.0% | |
! | ATCAGATGCTTTTCATCCTA+TGG | - | chr1_4:10644686-10644705 | Msa0149750:intron | 35.0% |
TTAGAGGTTAGATTGTTAGG+AGG | + | chr1_4:10644760-10644779 | None:intergenic | 35.0% | |
TACAATGCTTCTATGTGTGA+TGG | - | chr1_4:10645481-10645500 | Msa0149750:intron | 35.0% | |
AAGTTAAGGACATTCCGTAA+TGG | + | chr1_4:10645626-10645645 | None:intergenic | 35.0% | |
ACGGAATGTCCTTAACTTTA+TGG | - | chr1_4:10645628-10645647 | Msa0149750:intron | 35.0% | |
ATCCTCAGTCCATAAAGTTA+AGG | + | chr1_4:10645640-10645659 | None:intergenic | 35.0% | |
CAAGTCATGACTCAGAAAAT+TGG | + | chr1_4:10645666-10645685 | None:intergenic | 35.0% | |
! | CAATTTTCTGAGTCATGACT+TGG | - | chr1_4:10645664-10645683 | Msa0149750:intron | 35.0% |
AAGTCGGTTATAAGCTTACT+CGG | - | chr1_4:10645975-10645994 | Msa0149750:intron | 35.0% | |
TTCTATCTCACTTTCTCTGT+CGG | + | chr1_4:10646333-10646352 | None:intergenic | 35.0% | |
ATCAGATTCAGAAGATCCTT+TGG | + | chr1_4:10641514-10641533 | None:intergenic | 35.0% | |
AATGTTGAGTGGAAATCTGA+TGG | + | chr1_4:10646550-10646569 | None:intergenic | 35.0% | |
AAGATGAACGTAAGCCATAT+CGG | + | chr1_4:10646713-10646732 | None:intergenic | 35.0% | |
GAATGGTAGGTTTATTTCCA+TGG | + | chr1_4:10646893-10646912 | None:intergenic | 35.0% | |
GGAAATAAACCTACCATTCT+CGG | - | chr1_4:10646894-10646913 | Msa0149750:intron | 35.0% | |
GAAGGTTATACCTAACATGT+CGG | - | chr1_4:10640344-10640363 | Msa0149750:intron | 35.0% | |
! | ACATCTGTGTTTTCAAAGGT+CGG | - | chr1_4:10647009-10647028 | Msa0149750:intron | 35.0% |
TTAGTTGCTGAATCTTTGGT+TGG | - | chr1_4:10647101-10647120 | Msa0149750:intron | 35.0% | |
TGGGGATACTAAATTCTTAG+TGG | - | chr1_4:10647127-10647146 | Msa0149750:intron | 35.0% | |
CATCATCATCATCAAACCTA+CGG | + | chr1_4:10647190-10647209 | None:intergenic | 35.0% | |
ACGTGTTTAAGCTTAATGGA+AGG | - | chr1_4:10647231-10647250 | Msa0149750:intron | 35.0% | |
CGTGTTTAAGCTTAATGGAA+GGG | - | chr1_4:10647232-10647251 | Msa0149750:intron | 35.0% | |
AGAAGCAGAAAATGAACCTT+GGG | + | chr1_4:10647312-10647331 | None:intergenic | 35.0% | |
! | TTCATTTTCTGCTTCTGCTT+TGG | - | chr1_4:10647316-10647335 | Msa0149750:five_prime_UTR | 35.0% |
ATGATGACACAATTCCCTTT+GGG | + | chr1_4:10642453-10642472 | None:intergenic | 35.0% | |
AATGATGACACAATTCCCTT+TGG | + | chr1_4:10642454-10642473 | None:intergenic | 35.0% | |
AGGGAATTGTGTCATCATTA+TGG | - | chr1_4:10642455-10642474 | Msa0149750:intron | 35.0% | |
!!! | GTATTGTGCAACCTCTTTTT+TGG | - | chr1_4:10647397-10647416 | Msa0149750:five_prime_UTR | 35.0% |
ATCATCCAAGTCCAAAAAAG+AGG | + | chr1_4:10640765-10640784 | None:intergenic | 35.0% | |
!!! | TCTTTTTTGGACTTGGATGA+TGG | - | chr1_4:10640764-10640783 | Msa0149750:intron | 35.0% |
GAATAAGCCCGGTTTATTTG+GGG | + | chr1_4:10632147-10632166 | None:intergenic | 40.0% | |
CTGAATAAGCCCGGTTTATT+TGG | + | chr1_4:10632149-10632168 | None:intergenic | 40.0% | |
ATCATGGAGCAAGATGATGA+TGG | - | chr1_4:10632220-10632239 | Msa0149750:CDS | 40.0% | |
GATGGTAAAGCCAAAAGAAC+TGG | - | chr1_4:10632238-10632257 | Msa0149750:CDS | 40.0% | |
TTTGCTTCATACGCAAGAGT+CGG | + | chr1_4:10632633-10632652 | None:intergenic | 40.0% | |
CACGGTAACCAATTTCTGTA+AGG | + | chr1_4:10632677-10632696 | None:intergenic | 40.0% | |
TGGAAACCCCTCAACAAAAA+AGG | - | chr1_4:10632810-10632829 | Msa0149750:CDS | 40.0% | |
GGAAACCCCTCAACAAAAAA+GGG | - | chr1_4:10632811-10632830 | Msa0149750:CDS | 40.0% | |
GAAACCCCTCAACAAAAAAG+GGG | - | chr1_4:10632812-10632831 | Msa0149750:CDS | 40.0% | |
!!! | TTCTCCCCTTTTTTGTTGAG+GGG | + | chr1_4:10632819-10632838 | None:intergenic | 40.0% |
CAAAAAAGGGGAGAAAACCA+CGG | - | chr1_4:10632824-10632843 | Msa0149750:CDS | 40.0% | |
AAAAAAGGGGAGAAAACCAC+GGG | - | chr1_4:10632825-10632844 | Msa0149750:CDS | 40.0% | |
AGGACCTCTCTCTAAATACA+AGG | - | chr1_4:10632886-10632905 | Msa0149750:CDS | 40.0% | |
CTCTCCTTGTATTTAGAGAG+AGG | + | chr1_4:10632893-10632912 | None:intergenic | 40.0% | |
CCGTGATTACTTCCTTCTTT+CGG | + | chr1_4:10633137-10633156 | None:intergenic | 40.0% | |
CCGAAAGAAGGAAGTAATCA+CGG | - | chr1_4:10633134-10633153 | Msa0149750:intron | 40.0% | |
ATGCATGGAACAGTAAAAGG+AGG | + | chr1_4:10633186-10633205 | None:intergenic | 40.0% | |
TCTTCAAGTGGGAGAATTGT+TGG | + | chr1_4:10633237-10633256 | None:intergenic | 40.0% | |
AATGCTCACAAATATGGCTG+CGG | + | chr1_4:10633293-10633312 | None:intergenic | 40.0% | |
TCAGTTGCTACGTTTCCAAT+AGG | - | chr1_4:10633337-10633356 | Msa0149750:intron | 40.0% | |
TCAACGCTGACAAGTTTGTA+TGG | + | chr1_4:10633380-10633399 | None:intergenic | 40.0% | |
!! | ACAAACTTGTCAGCGTTGAT+CGG | - | chr1_4:10633381-10633400 | Msa0149750:intron | 40.0% |
GCTTTGTCATTACATCTGCT+AGG | - | chr1_4:10633403-10633422 | Msa0149750:intron | 40.0% | |
! | TTTTGTTCGAGAAGTAGTGG+AGG | + | chr1_4:10633469-10633488 | None:intergenic | 40.0% |
CATTCAAGGACGAAACACAT+AGG | + | chr1_4:10633504-10633523 | None:intergenic | 40.0% | |
TTCGTCCTTGAATGAAAAGC+TGG | - | chr1_4:10633510-10633529 | Msa0149750:intron | 40.0% | |
! | GGAATCCAGCTTTTCATTCA+AGG | + | chr1_4:10633518-10633537 | None:intergenic | 40.0% |
AAAGGTTAATGGAGGAACTC+GGG | + | chr1_4:10633599-10633618 | None:intergenic | 40.0% | |
CAAAGGTTAATGGAGGAACT+CGG | + | chr1_4:10633600-10633619 | None:intergenic | 40.0% | |
TTGGATGCAAAGGTTAATGG+AGG | + | chr1_4:10633607-10633626 | None:intergenic | 40.0% | |
AGGAAGCTATTTGGATGCAA+AGG | + | chr1_4:10633617-10633636 | None:intergenic | 40.0% | |
AAGCGTGTAAGGAAGCTATT+TGG | + | chr1_4:10633626-10633645 | None:intergenic | 40.0% | |
AAATAGCTTCCTTACACGCT+TGG | - | chr1_4:10633625-10633644 | Msa0149750:intron | 40.0% | |
AATAGCTTCCTTACACGCTT+GGG | - | chr1_4:10633626-10633645 | Msa0149750:intron | 40.0% | |
GGATCAGAATTAACTGTCAG+AGG | + | chr1_4:10633804-10633823 | None:intergenic | 40.0% | |
GAAACATATTGCAACACCTG+AGG | - | chr1_4:10633827-10633846 | Msa0149750:intron | 40.0% | |
AGGTACATAAAAGGAACCTC+AGG | + | chr1_4:10633846-10633865 | None:intergenic | 40.0% | |
!! | GTCTGGTCTTGTACATATCA+TGG | - | chr1_4:10633947-10633966 | Msa0149750:intron | 40.0% |
TACAGTCTTGCATGTTGAAG+CGG | - | chr1_4:10634096-10634115 | Msa0149750:intron | 40.0% | |
! | TCTTCCTGTCTTTTCTGTCT+CGG | - | chr1_4:10634159-10634178 | Msa0149750:intron | 40.0% |
! | GGACCAGCAAACAAGATTTT+AGG | + | chr1_4:10634197-10634216 | None:intergenic | 40.0% |
GGAGTTCGATATGAAAGACT+TGG | + | chr1_4:10634219-10634238 | None:intergenic | 40.0% | |
GTTGTATGTGGATGACATGT+TGG | + | chr1_4:10634294-10634313 | None:intergenic | 40.0% | |
AACTCAGCCTATTGTAATCG+AGG | - | chr1_4:10634369-10634388 | Msa0149750:intron | 40.0% | |
! | ATCTCTGTACAGTCTAAAGC+AGG | + | chr1_4:10634438-10634457 | None:intergenic | 40.0% |
CCTTGTTCCTTAAATCCTTC+CGG | - | chr1_4:10634488-10634507 | Msa0149750:intron | 40.0% | |
ATTTATATGCTCCAACCGGA+AGG | + | chr1_4:10634506-10634525 | None:intergenic | 40.0% | |
GTTGGCAATGTGTGATGTAT+TGG | + | chr1_4:10634591-10634610 | None:intergenic | 40.0% | |
ATGGCAATGATCAAGTGGAA+CGG | + | chr1_4:10634715-10634734 | None:intergenic | 40.0% | |
TTGTTGAACTTCCAAAGGGT+CGG | + | chr1_4:10634778-10634797 | None:intergenic | 40.0% | |
!! | GGAACTTGTTGAACTTCCAA+AGG | + | chr1_4:10634783-10634802 | None:intergenic | 40.0% |
CCTTACATAGGAACAAGACA+TGG | + | chr1_4:10634805-10634824 | None:intergenic | 40.0% | |
! | CCATGTCTTGTTCCTATGTA+AGG | - | chr1_4:10634802-10634821 | Msa0149750:intron | 40.0% |
AAGAAATGGAGGCCTTACAT+AGG | + | chr1_4:10634817-10634836 | None:intergenic | 40.0% | |
AGCAATGCATGAAGAAATGG+AGG | + | chr1_4:10634828-10634847 | None:intergenic | 40.0% | |
GACAGCAATGCATGAAGAAA+TGG | + | chr1_4:10634831-10634850 | None:intergenic | 40.0% | |
!!! | ACTTTTCAAGAGGCGTTGAA+GGG | + | chr1_4:10634875-10634894 | None:intergenic | 40.0% |
!!! | AACTTTTCAAGAGGCGTTGA+AGG | + | chr1_4:10634876-10634895 | None:intergenic | 40.0% |
AACGCCTCTTGAAAAGTTGA+AGG | - | chr1_4:10634878-10634897 | Msa0149750:intron | 40.0% | |
ACATAGTCTGATTGCCAAAC+TGG | - | chr1_4:10634947-10634966 | Msa0149750:intron | 40.0% | |
ACACCATTATTGACCTCATC+TGG | - | chr1_4:10634998-10635017 | Msa0149750:intron | 40.0% | |
GAACCAGATGAGGTCAATAA+TGG | + | chr1_4:10635004-10635023 | None:intergenic | 40.0% | |
!! | TGATTCTTCTGAAGCTGAAC+CGG | + | chr1_4:10635041-10635060 | None:intergenic | 40.0% |
AGAGACTGTTATAGTGCAGT+TGG | + | chr1_4:10635083-10635102 | None:intergenic | 40.0% | |
CTCTACTAACAACAACCTTG+CGG | - | chr1_4:10635161-10635180 | Msa0149750:intron | 40.0% | |
TCTACTAACAACAACCTTGC+GGG | - | chr1_4:10635162-10635181 | Msa0149750:intron | 40.0% | |
GGGTTATGCTGACAATGTTA+AGG | + | chr1_4:10635212-10635231 | None:intergenic | 40.0% | |
ACCCAAGAAGATACATTTCC+TGG | - | chr1_4:10635228-10635247 | Msa0149750:intron | 40.0% | |
GTCCAGGAAATGTATCTTCT+TGG | + | chr1_4:10635233-10635252 | None:intergenic | 40.0% | |
GTCCAACTTCGTTCTTTCTT+GGG | - | chr1_4:10635258-10635277 | Msa0149750:intron | 40.0% | |
TTTCCTTTCCACATCTCCAT+CGG | - | chr1_4:10635340-10635359 | Msa0149750:intron | 40.0% | |
!! | GATTGATTTGAAGACACCGA+TGG | + | chr1_4:10635359-10635378 | None:intergenic | 40.0% |
TTCAAATCAATCGCCGTTGA+TGG | - | chr1_4:10635367-10635386 | Msa0149750:intron | 40.0% | |
AAGAGCTATGCTGAAAACAG+CGG | + | chr1_4:10635455-10635474 | None:intergenic | 40.0% | |
GCATAGCTCTTGTTCTTTCT+AGG | - | chr1_4:10635464-10635483 | Msa0149750:intron | 40.0% | |
AAGTGCTTGAGGACAGATAA+TGG | + | chr1_4:10635610-10635629 | None:intergenic | 40.0% | |
GCACAAATAGAGCTTGAAAC+TGG | + | chr1_4:10635643-10635662 | None:intergenic | 40.0% | |
! | GCTTTGAATGCCTTGAATAC+TGG | - | chr1_4:10635661-10635680 | Msa0149750:intron | 40.0% |
CATCTGACTTCTTCTTGATC+GGG | - | chr1_4:10635689-10635708 | Msa0149750:intron | 40.0% | |
GAGTCACCAGAATTATCTCT+GGG | + | chr1_4:10635772-10635791 | None:intergenic | 40.0% | |
ATGATGTGGCATCAAAGACT+AGG | + | chr1_4:10635973-10635992 | None:intergenic | 40.0% | |
TCTAGGAGATACATTGCAAG+AGG | + | chr1_4:10636037-10636056 | None:intergenic | 40.0% | |
AGTAGTGAAAGGCAATCTTG+TGG | + | chr1_4:10636100-10636119 | None:intergenic | 40.0% | |
TCAAGATTCCACTTTCAGTG+TGG | - | chr1_4:10636121-10636140 | Msa0149750:intron | 40.0% | |
TGTAAGATCCACACTGAAAG+TGG | + | chr1_4:10636132-10636151 | None:intergenic | 40.0% | |
TTGGACAATTGGATGATCTC+GGG | + | chr1_4:10636155-10636174 | None:intergenic | 40.0% | |
GTTGGACAATTGGATGATCT+CGG | + | chr1_4:10636156-10636175 | None:intergenic | 40.0% | |
! | AAGGAGTACGTCATGTAAAG+GGG | + | chr1_4:10636200-10636219 | None:intergenic | 40.0% |
! | CAAGGAGTACGTCATGTAAA+GGG | + | chr1_4:10636201-10636220 | None:intergenic | 40.0% |
! | ACAAGGAGTACGTCATGTAA+AGG | + | chr1_4:10636202-10636221 | None:intergenic | 40.0% |
TTACTCCTATGAGCCTATCT+CGG | + | chr1_4:10636319-10636338 | None:intergenic | 40.0% | |
! | TCTGAAGCTTCAACATCTCA+AGG | + | chr1_4:10636483-10636502 | None:intergenic | 40.0% |
CAATCCTTGAAGAAGAATCC+AGG | + | chr1_4:10636719-10636738 | None:intergenic | 40.0% | |
TTCTTCTTCAAGGATTGCAC+CGG | - | chr1_4:10636722-10636741 | Msa0149750:intron | 40.0% | |
GGCTTCTGATTTCAGAATAG+CGG | + | chr1_4:10636859-10636878 | None:intergenic | 40.0% | |
CAGATATCACTGACGAAAAG+TGG | + | chr1_4:10637124-10637143 | Msa0149760:CDS | 40.0% | |
! | TTTTCGTCAGTGATATCTGC+AGG | - | chr1_4:10637125-10637144 | Msa0149750:intron | 40.0% |
GTCTGTCATCTATTGCGTTT+AGG | - | chr1_4:10637147-10637166 | Msa0149750:intron | 40.0% | |
! | ACGGGAGAAATTTTTCCATG+TGG | + | chr1_4:10637211-10637230 | Msa0149760:intron | 40.0% |
! | ACACCACTAGTTTATCACAG+CGG | - | chr1_4:10637380-10637399 | Msa0149750:intron | 40.0% |
TGGAAACCCCTCAACAAAAA+AGG | - | chr1_4:10632810-10632829 | Msa0149750:CDS | 40.0% | |
GGAAACCCCTCAACAAAAAA+GGG | - | chr1_4:10632811-10632830 | Msa0149750:CDS | 40.0% | |
GAAACCCCTCAACAAAAAAG+GGG | - | chr1_4:10632812-10632831 | Msa0149750:CDS | 40.0% | |
!!! | TTCTCCCCTTTTTTGTTGAG+GGG | + | chr1_4:10632819-10632838 | None:intergenic | 40.0% |
CAAAAAAGGGGAGAAAACCA+CGG | - | chr1_4:10632824-10632843 | Msa0149750:CDS | 40.0% | |
AAAAAAGGGGAGAAAACCAC+GGG | - | chr1_4:10632825-10632844 | Msa0149750:CDS | 40.0% | |
AGGACCTCTCTCTAAATACA+AGG | - | chr1_4:10632886-10632905 | Msa0149750:CDS | 40.0% | |
CTCTCCTTGTATTTAGAGAG+AGG | + | chr1_4:10632893-10632912 | None:intergenic | 40.0% | |
CCGTGATTACTTCCTTCTTT+CGG | + | chr1_4:10633137-10633156 | None:intergenic | 40.0% | |
CCGAAAGAAGGAAGTAATCA+CGG | - | chr1_4:10633134-10633153 | Msa0149750:intron | 40.0% | |
ATGCATGGAACAGTAAAAGG+AGG | + | chr1_4:10633186-10633205 | None:intergenic | 40.0% | |
!! | TCAACTATGTTGGCTCATCA+TGG | + | chr1_4:10637939-10637958 | None:intergenic | 40.0% |
!! | TGGAACTCTGGCTTCAATTT+TGG | + | chr1_4:10637983-10638002 | None:intergenic | 40.0% |
GTCTTGTAGCTGATTGCTAT+AGG | - | chr1_4:10638483-10638502 | Msa0149750:intron | 40.0% | |
TAGAACAGGGCAAAATTCAG+TGG | + | chr1_4:10638608-10638627 | None:intergenic | 40.0% | |
GGAACAATGCAAGTGATTTG+TGG | - | chr1_4:10638912-10638931 | Msa0149750:intron | 40.0% | |
!! | GTTTTGGCCTATTTAGGAGT+AGG | - | chr1_4:10639383-10639402 | Msa0149750:intron | 40.0% |
! | GTAGGCTTACATGTGTTGTT+AGG | - | chr1_4:10639401-10639420 | Msa0149750:intron | 40.0% |
!! | ATCAGGCTTTTAAAAAGGCC+AGG | - | chr1_4:10639465-10639484 | Msa0149750:intron | 40.0% |
TGTTTCTCGCTTTCTCTATC+GGG | + | chr1_4:10639628-10639647 | Msa0149780:intron | 40.0% | |
CTTCAGAAAGTGACTAGACT+AGG | + | chr1_4:10639687-10639706 | Msa0149780:intron | 40.0% | |
AATTCAGCAAGCATCATCCA+TGG | - | chr1_4:10639730-10639749 | Msa0149750:intron | 40.0% | |
! | GTTACTATGGTGATTTGGGA+TGG | + | chr1_4:10639876-10639895 | None:intergenic | 40.0% |
TTCGAAGAGTGGGAATTTGA+TGG | + | chr1_4:10639906-10639925 | None:intergenic | 40.0% | |
TGATGGAATCAACGTTGAGT+GGG | + | chr1_4:10639931-10639950 | None:intergenic | 40.0% | |
TTGATGGAATCAACGTTGAG+TGG | + | chr1_4:10639932-10639951 | None:intergenic | 40.0% | |
TTCAGTAACCTCTCCAAACA+CGG | - | chr1_4:10639965-10639984 | Msa0149750:intron | 40.0% | |
ATGAATGTAAGCCACGTTGT+AGG | + | chr1_4:10640093-10640112 | None:intergenic | 40.0% | |
! | CAAATGAAGTTGGTTGCCAA+AGG | + | chr1_4:10640159-10640178 | None:intergenic | 40.0% |
TTTATTTCCATGGGACGTGA+CGG | + | chr1_4:10640253-10640272 | None:intergenic | 40.0% | |
ATGTTTACCAGAACAGGCAA+AGG | + | chr1_4:10640292-10640311 | None:intergenic | 40.0% | |
TACTGGATGTTTACCAGAAC+AGG | + | chr1_4:10640298-10640317 | None:intergenic | 40.0% | |
CATCCAGTAGTGTTCAAATG+CGG | - | chr1_4:10640309-10640328 | Msa0149750:intron | 40.0% | |
TCAAATGCGGTGATGAGAAT+TGG | - | chr1_4:10640322-10640341 | Msa0149750:intron | 40.0% | |
TTTCAAAGGCCAACCTTATG+TGG | - | chr1_4:10640389-10640408 | Msa0149750:intron | 40.0% | |
CCAGTATTGTGTACCACATA+AGG | + | chr1_4:10640405-10640424 | None:intergenic | 40.0% | |
CCTTATGTGGTACACAATAC+TGG | - | chr1_4:10640402-10640421 | Msa0149750:intron | 40.0% | |
ATGTGGTACACAATACTGGA+CGG | - | chr1_4:10640406-10640425 | Msa0149750:intron | 40.0% | |
TTAGTGGCTCGATCTTTGAT+TGG | - | chr1_4:10640471-10640490 | Msa0149750:intron | 40.0% | |
TGAGAAGAAGTGGGTAAAGT+TGG | - | chr1_4:10640608-10640627 | Msa0149750:intron | 40.0% | |
GGGTAAAGTTGGCGAATATA+TGG | - | chr1_4:10640619-10640638 | Msa0149750:intron | 40.0% | |
! | CATTTTCTGTGCTTCTGCTT+CGG | - | chr1_4:10640673-10640692 | Msa0149750:intron | 40.0% |
!! | TTTTGGACTTGGATGATGGT+CGG | - | chr1_4:10640768-10640787 | Msa0149750:intron | 40.0% |
CTAAATTGTTCCGTACACCT+CGG | - | chr1_4:10640822-10640841 | Msa0149750:intron | 40.0% | |
CACAGAAAGGGACTTGATTA+GGG | + | chr1_4:10641428-10641447 | None:intergenic | 40.0% | |
CTCTTCTTTCTTCCACAGAA+AGG | + | chr1_4:10641441-10641460 | None:intergenic | 40.0% | |
AAATGTCACGGTGGTGATTT+CGG | + | chr1_4:10641612-10641631 | None:intergenic | 40.0% | |
TGATGGTTAAAATGTCACGG+TGG | + | chr1_4:10641621-10641640 | None:intergenic | 40.0% | |
TGAATAGGGGATAGAGGAAT+GGG | + | chr1_4:10641648-10641667 | None:intergenic | 40.0% | |
ATGAATAGGGGATAGAGGAA+TGG | + | chr1_4:10641649-10641668 | None:intergenic | 40.0% | |
CTTTGATGAATAGGGGATAG+AGG | + | chr1_4:10641654-10641673 | None:intergenic | 40.0% | |
TTCGAGAGGTTATTACGGAA+TGG | + | chr1_4:10641697-10641716 | None:intergenic | 40.0% | |
GTTGGTTGCCAAATGAAGAA+GGG | + | chr1_4:10641881-10641900 | None:intergenic | 40.0% | |
AGTTGGTTGCCAAATGAAGA+AGG | + | chr1_4:10641882-10641901 | None:intergenic | 40.0% | |
TTCTTTGTCGGGAATGAAGT+TGG | + | chr1_4:10641899-10641918 | None:intergenic | 40.0% | |
AGGTATATGTAGAGAACCAC+AGG | + | chr1_4:10641949-10641968 | None:intergenic | 40.0% | |
!!! | GAATGGTAGGTTTTTTTCCG+TGG | + | chr1_4:10641996-10642015 | None:intergenic | 40.0% |
AAAAGAAAACGTGCCGAGAA+TGG | + | chr1_4:10642013-10642032 | None:intergenic | 40.0% | |
TCAAATGCGGTGATGAGAAT+TGG | - | chr1_4:10640322-10640341 | Msa0149750:intron | 40.0% | |
CCTAAATAGGCCGATATTTC+AGG | + | chr1_4:10642096-10642115 | None:intergenic | 40.0% | |
CCTGAAATATCGGCCTATTT+AGG | - | chr1_4:10642093-10642112 | Msa0149750:intron | 40.0% | |
GGAGACATTTGTGTCTTCAA+AGG | - | chr1_4:10642114-10642133 | Msa0149750:intron | 40.0% | |
!! | CCAGTTTTGTCTACCACATA+AGG | + | chr1_4:10642144-10642163 | None:intergenic | 40.0% |
CCTTATGTGGTAGACAAAAC+TGG | - | chr1_4:10642141-10642160 | Msa0149750:intron | 40.0% | |
CTGAATCTTTGGTTAGTGGT+GGG | - | chr1_4:10642211-10642230 | Msa0149750:intron | 40.0% | |
TGAATCTTTGGTTAGTGGTG+GGG | - | chr1_4:10642212-10642231 | Msa0149750:intron | 40.0% | |
CAGAAGCAGAAAATGAACCA+TGG | + | chr1_4:10642413-10642432 | None:intergenic | 40.0% | |
!!! | TGCAAGCTCTTTTTTGGACT+TGG | - | chr1_4:10642503-10642522 | Msa0149750:intron | 40.0% |
!! | TTTTGGACTTGGATGATGGT+CGG | - | chr1_4:10640768-10640787 | Msa0149750:intron | 40.0% |
AGCTTCTTTATCCACTTTCG+AGG | + | chr1_4:10642595-10642614 | None:intergenic | 40.0% | |
AAAGATGCTGGAAAATGAGG+TGG | - | chr1_4:10642936-10642955 | Msa0149750:intron | 40.0% | |
CTGGAAAATGAGGTGGAATT+TGG | - | chr1_4:10642943-10642962 | Msa0149750:intron | 40.0% | |
AGATCAGCCGTATGTAAACT+TGG | + | chr1_4:10643106-10643125 | None:intergenic | 40.0% | |
AGTTTACATACGGCTGATCT+TGG | - | chr1_4:10643106-10643125 | Msa0149750:intron | 40.0% | |
GTTGGTTGCCTGCATTATTA+TGG | - | chr1_4:10643144-10643163 | Msa0149750:intron | 40.0% | |
GTTTGTAATTGAAAGACCCC+TGG | + | chr1_4:10643369-10643388 | None:intergenic | 40.0% | |
CCTTTGAACCTCTTCAAGTA+AGG | + | chr1_4:10643391-10643410 | None:intergenic | 40.0% | |
CCTTACTTGAAGAGGTTCAA+AGG | - | chr1_4:10643388-10643407 | Msa0149750:intron | 40.0% | |
CTGTGTGGGTTTAATCTACT+AGG | + | chr1_4:10643418-10643437 | None:intergenic | 40.0% | |
GAATTAATAAGTCGGCTGTG+TGG | + | chr1_4:10643433-10643452 | None:intergenic | 40.0% | |
AAACTCACACACTTTGAGTG+TGG | - | chr1_4:10643506-10643525 | Msa0149750:intron | 40.0% | |
CCAGATTGATGTTTATGCAG+AGG | + | chr1_4:10644170-10644189 | None:intergenic | 40.0% | |
CCTCTGCATAAACATCAATC+TGG | - | chr1_4:10644167-10644186 | Msa0149750:intron | 40.0% | |
CATCTTCCTTTGATGTGTGT+TGG | - | chr1_4:10644355-10644374 | Msa0149750:intron | 40.0% | |
ATTGGATAGGAAGGCCATTA+CGG | - | chr1_4:10645609-10645628 | Msa0149750:intron | 40.0% | |
! | GTCCTTAACTTTATGGACTG+AGG | - | chr1_4:10645635-10645654 | Msa0149750:intron | 40.0% |
GTCGGGTCAGTCATATATAT+AGG | + | chr1_4:10646315-10646334 | None:intergenic | 40.0% | |
TCTATCTCACTTTCTCTGTC+GGG | + | chr1_4:10646332-10646351 | None:intergenic | 40.0% | |
!! | AAGAGGAAGAGCATCATTCA+TGG | - | chr1_4:10646368-10646387 | Msa0149750:intron | 40.0% |
TCCGATCTATTTGTTCCAGT+TGG | - | chr1_4:10646484-10646503 | Msa0149750:intron | 40.0% | |
GCCAACTGGAACAAATAGAT+CGG | + | chr1_4:10646488-10646507 | None:intergenic | 40.0% | |
CATGAGGAAGAAACTGTGTT+TGG | + | chr1_4:10646610-10646629 | None:intergenic | 40.0% | |
TTCTTCCTCATGAAAGTTCG+TGG | - | chr1_4:10646618-10646637 | Msa0149750:intron | 40.0% | |
TCGTTGAAGTCGAAGAAGAT+GGG | + | chr1_4:10646741-10646760 | None:intergenic | 40.0% | |
TTCGTTGAAGTCGAAGAAGA+TGG | + | chr1_4:10646742-10646761 | None:intergenic | 40.0% | |
CGAATTCTCCCTTCTTCATT+TGG | - | chr1_4:10646758-10646777 | Msa0149750:intron | 40.0% | |
GTTGGTTGCCAAATGAAGAA+GGG | + | chr1_4:10641881-10641900 | None:intergenic | 40.0% | |
AGTTGGTTGCCAAATGAAGA+AGG | + | chr1_4:10641882-10641901 | None:intergenic | 40.0% | |
! | AGACGGCTATTGATTGAGAA+AGG | + | chr1_4:10646822-10646841 | None:intergenic | 40.0% |
TTCTCAATCAATAGCCGTCT+CGG | - | chr1_4:10646822-10646841 | Msa0149750:intron | 40.0% | |
!!! | GCTTTTCTAGGGTTCATGTA+GGG | + | chr1_4:10646855-10646874 | None:intergenic | 40.0% |
! | TGACAGCAATGGCTTTTCTA+GGG | + | chr1_4:10646866-10646885 | None:intergenic | 40.0% |
TCAAATGCGGTGATCAGAAT+TGG | - | chr1_4:10646952-10646971 | Msa0149750:intron | 40.0% | |
CCTAAATAAGCCGACATGTT+AGG | + | chr1_4:10646987-10647006 | None:intergenic | 40.0% | |
!! | CCTAACATGTCGGCTTATTT+AGG | - | chr1_4:10646984-10647003 | Msa0149750:intron | 40.0% |
! | GGAGACATCTGTGTTTTCAA+AGG | - | chr1_4:10647005-10647024 | Msa0149750:intron | 40.0% |
!! | CCAGTTTTGTCTACCACATA+AGG | + | chr1_4:10642144-10642163 | None:intergenic | 40.0% |
CCTTATGTGGTAGACAAAAC+TGG | - | chr1_4:10642141-10642160 | Msa0149750:intron | 40.0% | |
ATGTGGTAGACAAAACTGGA+CGG | - | chr1_4:10642145-10642164 | Msa0149750:intron | 40.0% | |
CCAAAGATTCAGCAACTAAC+TGG | + | chr1_4:10647100-10647119 | None:intergenic | 40.0% | |
CCAGTTAGTTGCTGAATCTT+TGG | - | chr1_4:10647097-10647116 | Msa0149750:intron | 40.0% | |
AAATTCTTAGTGGAGAGCGA+TGG | - | chr1_4:10647137-10647156 | Msa0149750:intron | 40.0% | |
TTAATGGAAGGGAGAAGAAG+TGG | - | chr1_4:10647243-10647262 | Msa0149750:CDS | 40.0% | |
TAATGGAAGGGAGAAGAAGT+GGG | - | chr1_4:10647244-10647263 | Msa0149750:CDS | 40.0% | |
!!! | AGGGGATAGAGTTTTGTTCT+TGG | - | chr1_4:10647283-10647302 | Msa0149750:exon | 40.0% |
!!! | GGGGATAGAGTTTTGTTCTT+GGG | - | chr1_4:10647284-10647303 | Msa0149750:exon | 40.0% |
!!! | GGGATAGAGTTTTGTTCTTG+GGG | - | chr1_4:10640640-10640659 | Msa0149750:intron | 40.0% |
CAGAAGCAGAAAATGAACCT+TGG | + | chr1_4:10647313-10647332 | None:intergenic | 40.0% | |
TTGGATTTGTGTGTTCCCAA+AGG | - | chr1_4:10647335-10647354 | Msa0149750:five_prime_UTR | 40.0% | |
TGGATTTGTGTGTTCCCAAA+GGG | - | chr1_4:10647336-10647355 | Msa0149750:five_prime_UTR | 40.0% | |
!!! | TGCAACCTCTTTTTTGGACT+TGG | - | chr1_4:10647403-10647422 | Msa0149750:five_prime_UTR | 40.0% |
!! | TTTTGGACTTGGATGATGGT+CGG | - | chr1_4:10640768-10640787 | Msa0149750:intron | 40.0% |
TATTCAGGATAATCGGTGAG+AGG | + | chr1_4:10647446-10647465 | None:intergenic | 40.0% | |
TAGAATTGTTCAGGCCAAAG+TGG | - | chr1_4:10647468-10647487 | Msa0149750:five_prime_UTR | 40.0% | |
! | CTATCTCTTTTGGCAGTCAC+CGG | - | chr1_4:10632111-10632130 | Msa0149750:CDS | 45.0% |
TGGACACTTGAGCAATTCGT+AGG | - | chr1_4:10632599-10632618 | Msa0149750:CDS | 45.0% | |
AAAAAGGGGAGAAAACCACG+GGG | - | chr1_4:10632826-10632845 | Msa0149750:CDS | 45.0% | |
TCTTCTGTGAGGTTTCTCCT+AGG | + | chr1_4:10632964-10632983 | None:intergenic | 45.0% | |
!! | GGAGAATTGTTGGCTCATCA+TGG | + | chr1_4:10633227-10633246 | None:intergenic | 45.0% |
GGAAACGTAGCAACTGAAGT+CGG | + | chr1_4:10633334-10633353 | None:intergenic | 45.0% | |
CGTTTCCAATAGGCCATATG+AGG | - | chr1_4:10633347-10633366 | Msa0149750:intron | 45.0% | |
TCGATCCTCATATGGCCTAT+TGG | + | chr1_4:10633355-10633374 | None:intergenic | 45.0% | |
!! | GTATGGTGTCGATCCTCATA+TGG | + | chr1_4:10633363-10633382 | None:intergenic | 45.0% |
! | TTCGAGAAGTAGTGGAGGAA+GGG | + | chr1_4:10633464-10633483 | None:intergenic | 45.0% |
TGGATTCCTTGCAATGTGCA+AGG | - | chr1_4:10633530-10633549 | Msa0149750:intron | 45.0% | |
AACGACAGAAGCTGAGTACA+TGG | + | chr1_4:10633658-10633677 | None:intergenic | 45.0% | |
TTGCAGGAGGAGATGTAAGT+TGG | + | chr1_4:10633713-10633732 | None:intergenic | 45.0% | |
! | GGTGTTGCAATATGTTTCGG+AGG | + | chr1_4:10633825-10633844 | None:intergenic | 45.0% |
GCATTCCAATGCTCTTTACC+CGG | - | chr1_4:10633882-10633901 | Msa0149750:intron | 45.0% | |
! | AGTGGTTAGTCGGTTTATGG+CGG | + | chr1_4:10633910-10633929 | None:intergenic | 45.0% |
TATGAGCCCTAGCAATGAAG+CGG | + | chr1_4:10634030-10634049 | None:intergenic | 45.0% | |
TTCACCGAGACAGAAAAGAC+AGG | + | chr1_4:10634166-10634185 | None:intergenic | 45.0% | |
! | ATTGAAGGCACAGTTGGCTA+GGG | + | chr1_4:10634240-10634259 | None:intergenic | 45.0% |
! | AATTGAAGGCACAGTTGGCT+AGG | + | chr1_4:10634241-10634260 | None:intergenic | 45.0% |
AGATCGAGTCCAGGAATTGA+AGG | + | chr1_4:10634255-10634274 | None:intergenic | 45.0% | |
TTCCTGGACTCGATCTTTGT+TGG | - | chr1_4:10634259-10634278 | Msa0149750:intron | 45.0% | |
TCCTGGACTCGATCTTTGTT+GGG | - | chr1_4:10634260-10634279 | Msa0149750:intron | 45.0% | |
GTATGTGGATGACATGTTGG+TGG | + | chr1_4:10634291-10634310 | None:intergenic | 45.0% | |
CCGGAAGGATTTAAGGAACA+AGG | + | chr1_4:10634491-10634510 | None:intergenic | 45.0% | |
GTTCCTTAAATCCTTCCGGT+TGG | - | chr1_4:10634492-10634511 | Msa0149750:intron | 45.0% | |
ACGTGATGGCAATGATCAAG+TGG | + | chr1_4:10634720-10634739 | None:intergenic | 45.0% | |
AGGGTTCAGATGCTTCTCAA+TGG | + | chr1_4:10634856-10634875 | None:intergenic | 45.0% | |
CGAAGAACAAGAACCAGATG+AGG | + | chr1_4:10635014-10635033 | None:intergenic | 45.0% | |
GGTCCAACTTCGTTCTTTCT+TGG | - | chr1_4:10635257-10635276 | Msa0149750:intron | 45.0% | |
CTCCCAAGAAAGAACGAAGT+TGG | + | chr1_4:10635263-10635282 | None:intergenic | 45.0% | |
TATGCTGAAAACAGCGGGAA+TGG | + | chr1_4:10635449-10635468 | None:intergenic | 45.0% | |
AGAGCTATGCTGAAAACAGC+GGG | + | chr1_4:10635454-10635473 | None:intergenic | 45.0% | |
! | TGCTTGAGGACAGATAATGG+AGG | + | chr1_4:10635607-10635626 | None:intergenic | 45.0% |
TCACCAGAATTATCTCTGGG+AGG | + | chr1_4:10635769-10635788 | None:intergenic | 45.0% | |
GGAGTCACCAGAATTATCTC+TGG | + | chr1_4:10635773-10635792 | None:intergenic | 45.0% | |
ATCACACAGTGCTCACAGAA+TGG | - | chr1_4:10635874-10635893 | Msa0149750:intron | 45.0% | |
ACGTGGCTTGAAAGTTCTTG+CGG | + | chr1_4:10635938-10635957 | None:intergenic | 45.0% | |
TCAAGCCACGTTCTGACATA+TGG | - | chr1_4:10635947-10635966 | Msa0149750:intron | 45.0% | |
AGGAGATACATTGCAAGAGG+CGG | + | chr1_4:10636034-10636053 | None:intergenic | 45.0% | |
! | ACCGACTCCAGCAATTTCTA+AGG | - | chr1_4:10636263-10636282 | Msa0149750:intron | 45.0% |
GCCTTAGAAATTGCTGGAGT+CGG | + | chr1_4:10636267-10636286 | None:intergenic | 45.0% | |
!! | CTCCAGCAATTTCTAAGGCA+TGG | - | chr1_4:10636268-10636287 | Msa0149750:intron | 45.0% |
GACCATGCCTTAGAAATTGC+TGG | + | chr1_4:10636273-10636292 | None:intergenic | 45.0% | |
TCGGAAGGATCAGTGTACAT+GGG | + | chr1_4:10636300-10636319 | None:intergenic | 45.0% | |
TACACTGATCCTTCCGAGAT+AGG | - | chr1_4:10636303-10636322 | Msa0149750:intron | 45.0% | |
GAGTAAAACCAATCTCGGTG+TGG | - | chr1_4:10636333-10636352 | Msa0149750:intron | 45.0% | |
ACTCAACGATGTCTGGATCA+TGG | + | chr1_4:10636385-10636404 | None:intergenic | 45.0% | |
! | GAAGCAGCAACCAGTTCTAA+AGG | + | chr1_4:10636417-10636436 | None:intergenic | 45.0% |
TTGCAAGTACCTCAGATGAC+GGG | + | chr1_4:10636455-10636474 | None:intergenic | 45.0% | |
GTTGCAAGTACCTCAGATGA+CGG | + | chr1_4:10636456-10636475 | None:intergenic | 45.0% | |
GTGGGAGTCAAAATCATGGT+AGG | + | chr1_4:10636608-10636627 | None:intergenic | 45.0% | |
!!! | ACCATGATTTTGACTCCCAC+TGG | - | chr1_4:10636608-10636627 | Msa0149750:intron | 45.0% |
!!! | CCATGATTTTGACTCCCACT+GGG | - | chr1_4:10636609-10636628 | Msa0149750:intron | 45.0% |
!!! | CATGATTTTGACTCCCACTG+GGG | - | chr1_4:10636610-10636629 | Msa0149750:intron | 45.0% |
AGAGAGTTCAAAGCAAGCAG+AGG | + | chr1_4:10636673-10636692 | None:intergenic | 45.0% | |
GGCGCAAGAATAAGGAAGAA+AGG | + | chr1_4:10636698-10636717 | None:intergenic | 45.0% | |
TTCTTCCTTATTCTTGCGCC+TGG | - | chr1_4:10636698-10636717 | Msa0149750:intron | 45.0% | |
AGAATCCAGGCGCAAGAATA+AGG | + | chr1_4:10636706-10636725 | None:intergenic | 45.0% | |
!! | CTTCACTTTGATGATGTCGC+CGG | + | chr1_4:10636744-10636763 | None:intergenic | 45.0% |
GATGTGATCCGTTACTGATG+TGG | - | chr1_4:10636911-10636930 | Msa0149750:intron | 45.0% | |
GGGTGAATCCACATCAGTAA+CGG | + | chr1_4:10636922-10636941 | None:intergenic | 45.0% | |
AGGCTCTACACTCTTCGAAT+GGG | + | chr1_4:10636942-10636961 | None:intergenic | 45.0% | |
AAGGCTCTACACTCTTCGAA+TGG | + | chr1_4:10636943-10636962 | None:intergenic | 45.0% | |
TGCCATTGCAAGGTGCAAAT+TGG | - | chr1_4:10637073-10637092 | Msa0149750:intron | 45.0% | |
TGCCAATTTGCACCTTGCAA+TGG | + | chr1_4:10637078-10637097 | Msa0149760:CDS | 45.0% | |
TGCAAGGTGCAAATTGGCAA+CGG | - | chr1_4:10637079-10637098 | Msa0149750:intron | 45.0% | |
CTTAGTATGCTCTGTGGTTG+CGG | + | chr1_4:10637348-10637367 | Msa0149760:intron | 45.0% | |
GTTCCGCTGTGATAAACTAG+TGG | + | chr1_4:10637386-10637405 | Msa0149760:intron | 45.0% | |
AAAAAGGGGAGAAAACCACG+GGG | - | chr1_4:10632826-10632845 | Msa0149750:CDS | 45.0% | |
TCTTCTGTGAGGTTTCTCCT+AGG | + | chr1_4:10632964-10632983 | None:intergenic | 45.0% | |
CGGGTATTTGTATGGAACTC+TGG | + | chr1_4:10637995-10638014 | None:intergenic | 45.0% | |
GCAATATTGCAGGGAATGTG+TGG | - | chr1_4:10638324-10638343 | Msa0149750:intron | 45.0% | |
ATAACAGTTGTAGTAGGGGC+AGG | - | chr1_4:10638365-10638384 | Msa0149750:intron | 45.0% | |
TAACAGTTGTAGTAGGGGCA+GGG | - | chr1_4:10638366-10638385 | Msa0149750:intron | 45.0% | |
ACCAGCTATCCATCCTAGTT+GGG | + | chr1_4:10638417-10638436 | None:intergenic | 45.0% | |
TACCAGCTATCCATCCTAGT+TGG | + | chr1_4:10638418-10638437 | None:intergenic | 45.0% | |
CTAGGATGGATAGCTGGTAT+AGG | - | chr1_4:10638419-10638438 | Msa0149750:intron | 45.0% | |
CAAGCTGTCAAGAGCTACTT+AGG | - | chr1_4:10638548-10638567 | Msa0149750:intron | 45.0% | |
TGAGCTCAAGAGCTCTACAA+TGG | - | chr1_4:10638806-10638825 | Msa0149750:intron | 45.0% | |
!! | AAAGCTTGCTGGGATAACAG+TGG | - | chr1_4:10638950-10638969 | Msa0149750:intron | 45.0% |
!! | AAGCTTGCTGGGATAACAGT+GGG | - | chr1_4:10638951-10638970 | Msa0149750:intron | 45.0% |
!! | AGGCTTTTAAGTCGGCTTTC+AGG | - | chr1_4:10639438-10639457 | Msa0149750:intron | 45.0% |
CCTCGAAAATGAGCCTATGA+CGG | - | chr1_4:10639493-10639512 | Msa0149750:intron | 45.0% | |
CTCGAAAATGAGCCTATGAC+GGG | - | chr1_4:10639494-10639513 | Msa0149750:intron | 45.0% | |
!! | ATGAGCCTATGACGGGTAAT+AGG | - | chr1_4:10639501-10639520 | Msa0149750:intron | 45.0% |
!!! | TTTTGAAGTAGGCCAGGCTT+AGG | - | chr1_4:10639543-10639562 | Msa0149750:intron | 45.0% |
!! | TTATGGGTGGAAATGGGCTA+GGG | + | chr1_4:10639589-10639608 | Msa0149780:intron | 45.0% |
! | ATTATGGGTGGAAATGGGCT+AGG | + | chr1_4:10639590-10639609 | Msa0149780:intron | 45.0% |
TGGAAGGAGAAGGAAGACTA+GGG | + | chr1_4:10639652-10639671 | Msa0149780:intron | 45.0% | |
TTGGAAGGAGAAGGAAGACT+AGG | + | chr1_4:10639653-10639672 | Msa0149780:intron | 45.0% | |
GATGGAAGAAGAACGCCAAT+TGG | + | chr1_4:10639858-10639877 | None:intergenic | 45.0% | |
GATGGAATCAACGTTGAGTG+GGG | + | chr1_4:10639930-10639949 | None:intergenic | 45.0% | |
TAAACAACCAAGGACGACGA+CGG | + | chr1_4:10640024-10640043 | None:intergenic | 45.0% | |
CGTGGCTTACATTCATCTTC+TGG | - | chr1_4:10640097-10640116 | Msa0149750:intron | 45.0% | |
TCTGTTGAAGTCGAAGAAGC+AGG | + | chr1_4:10640124-10640143 | None:intergenic | 45.0% | |
CAGATTCTCCCTTCTTCCTT+TGG | - | chr1_4:10640140-10640159 | Msa0149750:intron | 45.0% | |
GTTGGTTGCCAAAGGAAGAA+GGG | + | chr1_4:10640151-10640170 | None:intergenic | 45.0% | |
AGTTGGTTGCCAAAGGAAGA+AGG | + | chr1_4:10640152-10640171 | None:intergenic | 45.0% | |
TTCGTCGACGCAAATGAAGT+TGG | + | chr1_4:10640169-10640188 | None:intergenic | 45.0% | |
! | TGACGGCAATGGCTTTTGTT+GGG | + | chr1_4:10640236-10640255 | None:intergenic | 45.0% |
TCACCGCATTTGAACACTAC+TGG | + | chr1_4:10640315-10640334 | None:intergenic | 45.0% | |
ATGCGGTGATGAGAATTGGA+AGG | - | chr1_4:10640326-10640345 | Msa0149750:intron | 45.0% | |
CCAAAACAAGCCGACATGTT+AGG | + | chr1_4:10640357-10640376 | None:intergenic | 45.0% | |
!!! | CCTAACATGTCGGCTTGTTT+TGG | - | chr1_4:10640354-10640373 | Msa0149750:intron | 45.0% |
ACTGGACGGACAGTTACTAT+TGG | - | chr1_4:10640420-10640439 | Msa0149750:intron | 45.0% | |
CGGACAGTTACTATTGGACT+TGG | - | chr1_4:10640426-10640445 | Msa0149750:intron | 45.0% | |
TCAAAGATCGAGCCACTAAC+TGG | + | chr1_4:10640470-10640489 | None:intergenic | 45.0% | |
GCTCGATCTTTGATTGGTGA+TGG | - | chr1_4:10640477-10640496 | Msa0149750:intron | 45.0% | |
TCGGATTTGTGTGTTCCCAA+AGG | - | chr1_4:10640692-10640711 | Msa0149750:intron | 45.0% | |
CGGATTTGTGTGTTCCCAAA+GGG | - | chr1_4:10640693-10640712 | Msa0149750:intron | 45.0% | |
GCTTCTTTATCCGAGGTGTA+CGG | + | chr1_4:10640835-10640854 | None:intergenic | 45.0% | |
CCACAGAAAGGGACTTGATT+AGG | + | chr1_4:10641429-10641448 | None:intergenic | 45.0% | |
CCTAATCAAGTCCCTTTCTG+TGG | - | chr1_4:10641426-10641445 | Msa0149750:intron | 45.0% | |
!! | AGATTGGTCTGAACTGCCAA+AGG | - | chr1_4:10641495-10641514 | Msa0149750:intron | 45.0% |
GGAAGAAACTGTGTTTCGAG+AGG | + | chr1_4:10641711-10641730 | None:intergenic | 45.0% | |
GTTCTTGTGGTGGTTTGATG+AGG | + | chr1_4:10641732-10641751 | None:intergenic | 45.0% | |
! | ACTAGGGTTTGTTCTTGTGG+TGG | + | chr1_4:10641742-10641761 | None:intergenic | 45.0% |
! | CCAACTAGGGTTTGTTCTTG+TGG | + | chr1_4:10641745-10641764 | None:intergenic | 45.0% |
CCACAAGAACAAACCCTAGT+TGG | - | chr1_4:10641742-10641761 | Msa0149750:intron | 45.0% | |
GGTGGTTTCGTTTCTTTGTC+GGG | + | chr1_4:10641910-10641929 | None:intergenic | 45.0% | |
CGGTGGTTTCGTTTCTTTGT+CGG | + | chr1_4:10641911-10641930 | None:intergenic | 45.0% | |
AAACCACCGTTCTCAATCGA+TGG | - | chr1_4:10641922-10641941 | Msa0149750:intron | 45.0% | |
! | ACAGGACCATCGATTGAGAA+CGG | + | chr1_4:10641931-10641950 | None:intergenic | 45.0% |
TGACCGCAATGGCTTTCTTA+AGG | + | chr1_4:10641969-10641988 | None:intergenic | 45.0% | |
ACTGGCTGATCAACAGAACA+GGG | + | chr1_4:10642036-10642055 | None:intergenic | 45.0% | |
ACTGGACGTACAGTTACTGT+TGG | - | chr1_4:10642159-10642178 | Msa0149750:intron | 45.0% | |
ACGTACAGTTACTGTTGGAC+CGG | - | chr1_4:10642164-10642183 | Msa0149750:intron | 45.0% | |
GTGGCTGAATCTTTGGTTAG+TGG | - | chr1_4:10642207-10642226 | Msa0149750:intron | 45.0% | |
GCTGAATCTTTGGTTAGTGG+TGG | - | chr1_4:10642210-10642229 | Msa0149750:intron | 45.0% | |
GGAGAAGAAGTGGTTGAAGT+TGG | - | chr1_4:10642353-10642372 | Msa0149750:intron | 45.0% | |
TCGGATTTGTGTGTTCCCAA+AGG | - | chr1_4:10640692-10640711 | Msa0149750:intron | 45.0% | |
CGGATTTGTGTGTTCCCAAA+GGG | - | chr1_4:10640693-10640712 | Msa0149750:intron | 45.0% | |
TTTGAATTGTTCGTGCCACC+TGG | - | chr1_4:10642567-10642586 | Msa0149750:intron | 45.0% | |
!! | TGAGGTGGAATTTGGTTTGC+CGG | - | chr1_4:10642951-10642970 | Msa0149750:intron | 45.0% |
AAACCGTTCGAACGCTTATC+CGG | + | chr1_4:10642973-10642992 | None:intergenic | 45.0% | |
TTGTTCCTGGAGTAAACTCC+AGG | - | chr1_4:10643348-10643367 | Msa0149750:intron | 45.0% | |
TGTTCCTGGAGTAAACTCCA+GGG | - | chr1_4:10643349-10643368 | Msa0149750:intron | 45.0% | |
ACTTTGAGTGTGGAGAATCC+CGG | - | chr1_4:10643516-10643535 | Msa0149750:intron | 45.0% | |
TGCTGCAAGAAGCCATAGAA+TGG | + | chr1_4:10644243-10644262 | None:intergenic | 45.0% | |
CTGATACTACGTTGCACCAT+AGG | + | chr1_4:10644663-10644682 | None:intergenic | 45.0% | |
GAGGTTAGATTGTTAGGAGG+AGG | + | chr1_4:10644757-10644776 | None:intergenic | 45.0% | |
GAGTGAGTAGTTCTCCCTTA+TGG | + | chr1_4:10645375-10645394 | None:intergenic | 45.0% | |
TAATAAATCCTAGGTCGGGG+TGG | + | chr1_4:10646107-10646126 | None:intergenic | 45.0% | |
TGAGATAGAACCCTAGTCTC+TGG | - | chr1_4:10646343-10646362 | Msa0149750:intron | 45.0% | |
TTCCTCTTCTCCAGAGACTA+GGG | + | chr1_4:10646356-10646375 | None:intergenic | 45.0% | |
!! | AAGAGCATCATTCATGGCCA+TGG | - | chr1_4:10646374-10646393 | Msa0149750:intron | 45.0% |
!! | AGATTGGTCTGAACTGCCAA+AGG | - | chr1_4:10641495-10641514 | Msa0149750:intron | 45.0% |
! | GTTACGATGGTGATTTGGGA+TGG | + | chr1_4:10646520-10646539 | None:intergenic | 45.0% |
GACAACCACGAACTTTCATG+AGG | + | chr1_4:10646626-10646645 | None:intergenic | 45.0% | |
ATGAACGTAAGCCATATCGG+AGG | + | chr1_4:10646710-10646729 | None:intergenic | 45.0% | |
! | GTAGTGTCATTCGTTCGTCA+GGG | + | chr1_4:10646800-10646819 | None:intergenic | 45.0% |
!!! | GGCTTTTCTAGGGTTCATGT+AGG | + | chr1_4:10646856-10646875 | None:intergenic | 45.0% |
! | GTGACAGCAATGGCTTTTCT+AGG | + | chr1_4:10646867-10646886 | None:intergenic | 45.0% |
TGTTCTCCAGAACAGGCAAT+CGG | + | chr1_4:10646921-10646940 | None:intergenic | 45.0% | |
CAGCCAGTAGTGTTCAAATG+CGG | - | chr1_4:10646939-10646958 | Msa0149750:intron | 45.0% | |
TCACCGCATTTGAACACTAC+TGG | + | chr1_4:10640315-10640334 | None:intergenic | 45.0% | |
ATGCGGTGATCAGAATTGGA+AGG | - | chr1_4:10646956-10646975 | Msa0149750:intron | 45.0% | |
! | TTTCAAAGGTCGGCCTTATG+TGG | - | chr1_4:10647019-10647038 | Msa0149750:intron | 45.0% |
ACTGGACGGACAATTACTGT+TGG | - | chr1_4:10647050-10647069 | Msa0149750:intron | 45.0% | |
CTGGACGGACAATTACTGTT+GGG | - | chr1_4:10647051-10647070 | Msa0149750:intron | 45.0% | |
AATTACTGTTGGGCTTGGAC+CGG | - | chr1_4:10647061-10647080 | Msa0149750:intron | 45.0% | |
AACTGGACAGTGGAATCATC+CGG | + | chr1_4:10647083-10647102 | None:intergenic | 45.0% | |
TTCAGCAACTAACTGGACAG+TGG | + | chr1_4:10647093-10647112 | None:intergenic | 45.0% | |
GTTGCTGAATCTTTGGTTGG+TGG | - | chr1_4:10647104-10647123 | Msa0149750:intron | 45.0% | |
!! | CTGAATCTTTGGTTGGTGGT+GGG | - | chr1_4:10647108-10647127 | Msa0149750:intron | 45.0% |
!! | TGAATCTTTGGTTGGTGGTG+GGG | - | chr1_4:10647109-10647128 | Msa0149750:intron | 45.0% |
!! | GAGCGATGGTGATTTGTTGT+TGG | - | chr1_4:10647151-10647170 | Msa0149750:intron | 45.0% |
TGGGTGAAGTTGGCGAATTT+AGG | - | chr1_4:10647263-10647282 | Msa0149750:CDS | 45.0% | |
GGGTGAAGTTGGCGAATTTA+GGG | - | chr1_4:10647264-10647283 | Msa0149750:CDS | 45.0% | |
GGTGAAGTTGGCGAATTTAG+GGG | - | chr1_4:10647265-10647284 | Msa0149750:CDS | 45.0% | |
!! | TAAAAAATAAAATATTTGAT+TGG | - | chr1_4:10632039-10632058 | Msa0149750:CDS | 5.0% |
!!! | ATTTATTTTTTATTTTTTTG+AGG | - | chr1_4:10641261-10641280 | Msa0149750:intron | 5.0% |
!!! | TTTATTTTTTATTTTTTTGA+GGG | - | chr1_4:10641262-10641281 | Msa0149750:intron | 5.0% |
!!! | GAAAAATTATATTTTTTTAA+AGG | - | chr1_4:10644570-10644589 | Msa0149750:intron | 5.0% |
!! | GTAAAATTTAATAAAAATAT+TGG | + | chr1_4:10644735-10644754 | None:intergenic | 5.0% |
CGGTGACTGCCAAAAGAGAT+AGG | + | chr1_4:10632113-10632132 | None:intergenic | 50.0% | |
TTGGTGAGCAGAGCTGATGA+AGG | + | chr1_4:10632444-10632463 | None:intergenic | 50.0% | |
ATATGGCTGCGGCATGATCA+AGG | + | chr1_4:10633282-10633301 | None:intergenic | 50.0% | |
! | GTTCGAGAAGTAGTGGAGGA+AGG | + | chr1_4:10633465-10633484 | None:intergenic | 50.0% |
! | AGAGTGCCTTGCACATTGCA+AGG | + | chr1_4:10633539-10633558 | None:intergenic | 50.0% |
TATGTGTTCACGCTTGCAGG+AGG | + | chr1_4:10633726-10633745 | None:intergenic | 50.0% | |
GGTTATGTGTTCACGCTTGC+AGG | + | chr1_4:10633729-10633748 | None:intergenic | 50.0% | |
!! | TAGTCGGTTTATGGCGGATC+CGG | + | chr1_4:10633904-10633923 | None:intergenic | 50.0% |
! | GGGAGTGGTTAGTCGGTTTA+TGG | + | chr1_4:10633913-10633932 | None:intergenic | 50.0% |
AAGCAGTGGGAGTGGTTAGT+CGG | + | chr1_4:10633920-10633939 | None:intergenic | 50.0% | |
CCAGACATTGCACAAGCAGT+GGG | + | chr1_4:10633933-10633952 | None:intergenic | 50.0% | |
ACCAGACATTGCACAAGCAG+TGG | + | chr1_4:10633934-10633953 | None:intergenic | 50.0% | |
! | GTCTCGAGTACCGTATGCAT+CGG | + | chr1_4:10633994-10634013 | None:intergenic | 50.0% |
TAGCAATGAAGCGGAGAGGA+TGG | + | chr1_4:10634021-10634040 | None:intergenic | 50.0% | |
ATCCTCTCCGCTTCATTGCT+AGG | - | chr1_4:10634020-10634039 | Msa0149750:intron | 50.0% | |
TCCTCTCCGCTTCATTGCTA+GGG | - | chr1_4:10634021-10634040 | Msa0149750:intron | 50.0% | |
ATTGCTAGGGCTCATACCTG+AGG | - | chr1_4:10634034-10634053 | Msa0149750:intron | 50.0% | |
ACAGGAAGTGGGGTAGAGAT+TGG | - | chr1_4:10634071-10634090 | Msa0149750:intron | 50.0% | |
! | CCAGGAATTGAAGGCACAGT+TGG | + | chr1_4:10634246-10634265 | None:intergenic | 50.0% |
CCAACTGTGCCTTCAATTCC+TGG | - | chr1_4:10634243-10634262 | Msa0149750:intron | 50.0% | |
CCTGGACTCGATCTTTGTTG+GGG | - | chr1_4:10634261-10634280 | Msa0149750:intron | 50.0% | |
!! | GTGGATGACATGTTGGTGGT+AGG | + | chr1_4:10634287-10634306 | None:intergenic | 50.0% |
GCTCCAACCGGAAGGATTTA+AGG | + | chr1_4:10634498-10634517 | None:intergenic | 50.0% | |
CGTGCAAGACTGGTGGTAAA+AGG | + | chr1_4:10634689-10634708 | None:intergenic | 50.0% | |
TCAATGGCTTTCCGACCCTT+TGG | - | chr1_4:10634764-10634783 | Msa0149750:intron | 50.0% | |
GTCAGACGCAGAAACCAGTT+TGG | + | chr1_4:10634964-10634983 | None:intergenic | 50.0% | |
GGTTCTTGTTCTTCGTGCAC+CGG | - | chr1_4:10635019-10635038 | Msa0149750:intron | 50.0% | |
AACAACAACCTTGCGGGTAG+TGG | - | chr1_4:10635168-10635187 | Msa0149750:intron | 50.0% | |
ACAACAACCTTGCGGGTAGT+GGG | - | chr1_4:10635169-10635188 | Msa0149750:intron | 50.0% | |
!! | TGTTAAGGGGTATCGCCTGT+GGG | + | chr1_4:10635197-10635216 | None:intergenic | 50.0% |
!! | ATGTTAAGGGGTATCGCCTG+TGG | + | chr1_4:10635198-10635217 | None:intergenic | 50.0% |
ACACCGATGGAGATGTGGAA+AGG | + | chr1_4:10635346-10635365 | None:intergenic | 50.0% | |
TGAAGACACCGATGGAGATG+TGG | + | chr1_4:10635351-10635370 | None:intergenic | 50.0% | |
TGCTTCTGCCCAAAACGACT+TGG | - | chr1_4:10635423-10635442 | Msa0149750:intron | 50.0% | |
!! | GGGAATGGCCAAGTCGTTTT+GGG | + | chr1_4:10635434-10635453 | None:intergenic | 50.0% |
TACACCTCAGCAGAATGGTG+TGG | + | chr1_4:10635512-10635531 | None:intergenic | 50.0% | |
GCACATACACCTCAGCAGAA+TGG | + | chr1_4:10635517-10635536 | None:intergenic | 50.0% | |
CGGGTACACCCATAATCTTC+TGG | - | chr1_4:10635708-10635727 | Msa0149750:intron | 50.0% | |
GCTCCTCCCAGAGATAATTC+TGG | - | chr1_4:10635763-10635782 | Msa0149750:intron | 50.0% | |
TTACTGTCTTGAGCCCGTGA+AGG | - | chr1_4:10635902-10635921 | Msa0149750:intron | 50.0% | |
CTAGGCCATATGTCAGAACG+TGG | + | chr1_4:10635955-10635974 | None:intergenic | 50.0% | |
CGGAAGGATCAGTGTACATG+GGG | + | chr1_4:10636299-10636318 | None:intergenic | 50.0% | |
CTCGGAAGGATCAGTGTACA+TGG | + | chr1_4:10636301-10636320 | None:intergenic | 50.0% | |
TCCTTCCGAGATAGGCTCAT+AGG | - | chr1_4:10636311-10636330 | Msa0149750:intron | 50.0% | |
TCCTATGAGCCTATCTCGGA+AGG | + | chr1_4:10636315-10636334 | None:intergenic | 50.0% | |
ACATGACTCCACACCGAGAT+TGG | + | chr1_4:10636344-10636363 | None:intergenic | 50.0% | |
TCATGGACTCAGGTGCAACA+TGG | + | chr1_4:10636368-10636387 | None:intergenic | 50.0% | |
GATGTCTGGATCATGGACTC+AGG | + | chr1_4:10636378-10636397 | None:intergenic | 50.0% | |
GAAGACGACTCAACGATGTC+TGG | + | chr1_4:10636392-10636411 | None:intergenic | 50.0% | |
!! | TCGTCTTCCGCCTTTAGAAC+TGG | - | chr1_4:10636404-10636423 | Msa0149750:intron | 50.0% |
!! | GCAGCAACCAGTTCTAAAGG+CGG | + | chr1_4:10636414-10636433 | None:intergenic | 50.0% |
! | TGGTTGCTGCTTCGCTATAC+AGG | - | chr1_4:10636424-10636443 | Msa0149750:intron | 50.0% |
TGCAAGTACCTCAGATGACG+GGG | + | chr1_4:10636454-10636473 | None:intergenic | 50.0% | |
! | GGCACGTAAAGAAGGAGTGT+TGG | + | chr1_4:10636533-10636552 | None:intergenic | 50.0% |
! | CATGAGAGGGCACGTAAAGA+AGG | + | chr1_4:10636541-10636560 | None:intergenic | 50.0% |
CCCAGTGGGAGTCAAAATCA+TGG | + | chr1_4:10636612-10636631 | None:intergenic | 50.0% | |
AGAGGCAGATCAACAGAACG+TGG | + | chr1_4:10636636-10636655 | None:intergenic | 50.0% | |
TGCGCCTGGATTCTTCTTCA+AGG | - | chr1_4:10636712-10636731 | Msa0149750:intron | 50.0% | |
ATACCGAGTCTGCCATTGCA+AGG | - | chr1_4:10637063-10637082 | Msa0149750:intron | 50.0% | |
AACAGTGGTATCAGAGCAGC+TGG | + | chr1_4:10637421-10637440 | Msa0149760:CDS | 50.0% | |
AGCTGCTCTGATACCACTGT+TGG | - | chr1_4:10637420-10637439 | Msa0149750:intron | 50.0% | |
GCTGCTCTGATACCACTGTT+GGG | - | chr1_4:10637421-10637440 | Msa0149750:intron | 50.0% | |
GTTACTCTGGTACCCAACAG+TGG | + | chr1_4:10637436-10637455 | Msa0149760:CDS | 50.0% | |
AACAGTTGTAGTAGGGGCAG+GGG | - | chr1_4:10638367-10638386 | Msa0149750:intron | 50.0% | |
TATCCATCCTAGTTGGGCCA+TGG | + | chr1_4:10638411-10638430 | None:intergenic | 50.0% | |
AGGTTTCCAGACCCAATCAC+TGG | - | chr1_4:10638503-10638522 | Msa0149750:intron | 50.0% | |
! | CTTTTGCCAGTGATTGGGTC+TGG | + | chr1_4:10638512-10638531 | None:intergenic | 50.0% |
!! | ATTTTAGCAACGAGGGCGAG+CGG | - | chr1_4:10638642-10638661 | Msa0149750:intron | 50.0% |
!! | GCTTTTAAAAAGGCCAGGCC+AGG | - | chr1_4:10639470-10639489 | Msa0149750:intron | 50.0% |
!! | ATAGGCTCATTTTCGAGGCC+TGG | + | chr1_4:10639491-10639510 | Msa0149780:CDS | 50.0% |
! | CCGTCATAGGCTCATTTTCG+AGG | + | chr1_4:10639496-10639515 | Msa0149780:CDS | 50.0% |
CCTGACCTATTACCCGTCAT+AGG | + | chr1_4:10639509-10639528 | Msa0149780:CDS | 50.0% | |
!! | CCTATGACGGGTAATAGGTC+AGG | - | chr1_4:10639506-10639525 | Msa0149750:intron | 50.0% |
TGAGTGGGGATTCGAAGAGT+GGG | + | chr1_4:10639916-10639935 | None:intergenic | 50.0% | |
TTGAGTGGGGATTCGAAGAG+TGG | + | chr1_4:10639917-10639936 | None:intergenic | 50.0% | |
GGAAGAAACCGTGTTTGGAG+AGG | + | chr1_4:10639976-10639995 | None:intergenic | 50.0% | |
GTAAGCCACGTTGTAGGAGT+GGG | + | chr1_4:10640087-10640106 | None:intergenic | 50.0% | |
TGTAAGCCACGTTGTAGGAG+TGG | + | chr1_4:10640088-10640107 | None:intergenic | 50.0% | |
! | GTGACGGCAATGGCTTTTGT+TGG | + | chr1_4:10640237-10640256 | None:intergenic | 50.0% |
!! | GCAAAGGTGCCGAGAATGAT+AGG | + | chr1_4:10640276-10640295 | None:intergenic | 50.0% |
TAGCAGATGTCTACCACCGT+TGG | - | chr1_4:10640541-10640560 | Msa0149750:intron | 50.0% | |
!! | CTTGGATGATGGTCGGCTTT+TGG | - | chr1_4:10640775-10640794 | Msa0149750:intron | 50.0% |
GATTCAGCAAGCATCACCGA+TGG | - | chr1_4:10641468-10641487 | Msa0149750:intron | 50.0% | |
!! | GATGGAAGAAGAGCGCCAAT+TGG | + | chr1_4:10641590-10641609 | None:intergenic | 50.0% |
AGGAAGACGACGACCAACTA+GGG | + | chr1_4:10641758-10641777 | None:intergenic | 50.0% | |
AAGGAAGACGACGACCAACT+AGG | + | chr1_4:10641759-10641778 | None:intergenic | 50.0% | |
TAGTTGGTCGTCGTCTTCCT+TGG | - | chr1_4:10641758-10641777 | Msa0149750:intron | 50.0% | |
GCAAGCCATATCGGTAGAGT+GGG | + | chr1_4:10641819-10641838 | None:intergenic | 50.0% | |
TGCAAGCCATATCGGTAGAG+TGG | + | chr1_4:10641820-10641839 | None:intergenic | 50.0% | |
GTTCTCAATCGATGGTCCTG+TGG | - | chr1_4:10641930-10641949 | Msa0149750:intron | 50.0% | |
GAAAACGTGCCGAGAATGGT+AGG | + | chr1_4:10642009-10642028 | None:intergenic | 50.0% | |
! | CACTGGCTGATCAACAGAAC+AGG | + | chr1_4:10642037-10642056 | None:intergenic | 50.0% |
CTGTTCTGTTGATCAGCCAG+TGG | - | chr1_4:10642035-10642054 | Msa0149750:intron | 50.0% | |
CAGCCAGTGGTGTTCAAATG+CGG | - | chr1_4:10642048-10642067 | Msa0149750:intron | 50.0% | |
TCACCGCATTTGAACACCAC+TGG | + | chr1_4:10642054-10642073 | None:intergenic | 50.0% | |
! | CTTCAAAGGTCGGCCTTATG+TGG | - | chr1_4:10642128-10642147 | Msa0149750:intron | 50.0% |
TACAGTTACTGTTGGACCGG+AGG | - | chr1_4:10642167-10642186 | Msa0149750:intron | 50.0% | |
CCAAAGATTCAGCCACTAGC+TGG | + | chr1_4:10642203-10642222 | None:intergenic | 50.0% | |
CCAGCTAGTGGCTGAATCTT+TGG | - | chr1_4:10642200-10642219 | Msa0149750:intron | 50.0% | |
!! | GTTTTGTTCTTGGGGTCCCA+TGG | - | chr1_4:10642393-10642412 | Msa0149750:intron | 50.0% |
! | TTATCCACTTTCGAGGTGCC+AGG | + | chr1_4:10642588-10642607 | None:intergenic | 50.0% |
TTGCCGGATAAGCGTTCGAA+CGG | - | chr1_4:10642967-10642986 | Msa0149750:intron | 50.0% | |
GTTCCTGGAGTAAACTCCAG+GGG | - | chr1_4:10643350-10643369 | Msa0149750:intron | 50.0% | |
CTTTGAGTGTGGAGAATCCC+GGG | - | chr1_4:10643517-10643536 | Msa0149750:intron | 50.0% | |
AACTCAGTTGGACTGAACCC+GGG | + | chr1_4:10643537-10643556 | None:intergenic | 50.0% | |
CAACTCAGTTGGACTGAACC+CGG | + | chr1_4:10643538-10643557 | None:intergenic | 50.0% | |
!! | GCCTGTGTTTGGTTTGACGA+TGG | - | chr1_4:10643691-10643710 | Msa0149750:intron | 50.0% |
GCCATCGTCAAACCAAACAC+AGG | + | chr1_4:10643695-10643714 | None:intergenic | 50.0% | |
GAGGAAGCTATACGCACAGT+AGG | - | chr1_4:10643756-10643775 | Msa0149750:intron | 50.0% | |
GAAGCTATACGCACAGTAGG+CGG | - | chr1_4:10643759-10643778 | Msa0149750:intron | 50.0% | |
AAGCTATACGCACAGTAGGC+GGG | - | chr1_4:10643760-10643779 | Msa0149750:intron | 50.0% | |
GTTCTCAGATCACAAGGGCA+TGG | + | chr1_4:10644412-10644431 | None:intergenic | 50.0% | |
! | AACCCTAGTCTCTGGAGAAG+AGG | - | chr1_4:10646351-10646370 | Msa0149750:intron | 50.0% |
CTTCCTCTTCTCCAGAGACT+AGG | + | chr1_4:10646357-10646376 | None:intergenic | 50.0% | |
! | ACGATGGTGATTTGGGATGG+AGG | + | chr1_4:10646517-10646536 | None:intergenic | 50.0% |
AAGTTCGTGGTTGTCGTCCT+TGG | - | chr1_4:10646631-10646650 | Msa0149750:intron | 50.0% | |
!! | GTGGTATTGGGTTTTGCCAG+TGG | + | chr1_4:10646679-10646698 | None:intergenic | 50.0% |
GTAAGCCATATCGGAGGAGA+GGG | + | chr1_4:10646704-10646723 | None:intergenic | 50.0% | |
TTCGTCAGGGCAGATGAAGT+TGG | + | chr1_4:10646787-10646806 | None:intergenic | 50.0% | |
! | GGTAGTGTCATTCGTTCGTC+AGG | + | chr1_4:10646801-10646820 | None:intergenic | 50.0% |
TGTAGGGAACAACACCGAGA+CGG | + | chr1_4:10646839-10646858 | None:intergenic | 50.0% | |
GTTCTCCAGAACAGGCAATC+GGG | + | chr1_4:10646920-10646939 | None:intergenic | 50.0% | |
! | TACTGGCTGTTCTCCAGAAC+AGG | + | chr1_4:10646928-10646947 | None:intergenic | 50.0% |
CGGACAATTACTGTTGGGCT+TGG | - | chr1_4:10647056-10647075 | Msa0149750:intron | 50.0% | |
!! | GCTGAATCTTTGGTTGGTGG+TGG | - | chr1_4:10647107-10647126 | Msa0149750:intron | 50.0% |
GGAGAAGAAGTGGGTGAAGT+TGG | - | chr1_4:10647253-10647272 | Msa0149750:CDS | 50.0% | |
!! | GTTTTGTTCTTGGGGTCCCA+AGG | - | chr1_4:10642393-10642412 | Msa0149750:intron | 50.0% |
AGTTCTCTACTCTTGCCCCG+TGG | + | chr1_4:10632844-10632863 | None:intergenic | 55.0% | |
CGTAGCAACTGAAGTCGGCA+AGG | + | chr1_4:10633329-10633348 | None:intergenic | 55.0% | |
! | GGAGGAAGGGAGTGTGGATA+TGG | + | chr1_4:10633451-10633470 | None:intergenic | 55.0% |
! | AGTAGTGGAGGAAGGGAGTG+TGG | + | chr1_4:10633457-10633476 | None:intergenic | 55.0% |
! | CGGATCCGGGTAAAGAGCAT+TGG | + | chr1_4:10633890-10633909 | None:intergenic | 55.0% |
!! | AGTCGGTTTATGGCGGATCC+GGG | + | chr1_4:10633903-10633922 | None:intergenic | 55.0% |
CATTGCACAAGCAGTGGGAG+TGG | + | chr1_4:10633928-10633947 | None:intergenic | 55.0% | |
CCCACTGCTTGTGCAATGTC+TGG | - | chr1_4:10633930-10633949 | Msa0149750:intron | 55.0% | |
! | TCGAGTACCGTATGCATCGG+CGG | + | chr1_4:10633991-10634010 | None:intergenic | 55.0% |
CCCCAACAAAGATCGAGTCC+AGG | + | chr1_4:10634264-10634283 | None:intergenic | 55.0% | |
TAAAGCAGGCGCCCAGATGT+TGG | + | chr1_4:10634424-10634443 | None:intergenic | 55.0% | |
ACGGTATCGTGCAAGACTGG+TGG | + | chr1_4:10634696-10634715 | None:intergenic | 55.0% | |
GGAACGGTATCGTGCAAGAC+TGG | + | chr1_4:10634699-10634718 | None:intergenic | 55.0% | |
CGAAGTTGGACCCAAAGTCC+AGG | + | chr1_4:10635249-10635268 | None:intergenic | 55.0% | |
! | CGGGAATGGCCAAGTCGTTT+TGG | + | chr1_4:10635435-10635454 | None:intergenic | 55.0% |
AGCAGAATGGTGTGGCAGAG+CGG | + | chr1_4:10635504-10635523 | None:intergenic | 55.0% | |
TCTGCCACACCATTCTGCTG+AGG | - | chr1_4:10635505-10635524 | Msa0149750:intron | 55.0% | |
CGGAACGCAATCTCCTTCAC+GGG | + | chr1_4:10635918-10635937 | None:intergenic | 55.0% | |
GCGGAACGCAATCTCCTTCA+CGG | + | chr1_4:10635919-10635938 | None:intergenic | 55.0% | |
CAGGATTTCCCCGTCATCTG+AGG | - | chr1_4:10636443-10636462 | Msa0149750:intron | 55.0% | |
GCTACGGTTGTGGCATGAGA+GGG | + | chr1_4:10636554-10636573 | None:intergenic | 55.0% | |
TGCTACGGTTGTGGCATGAG+AGG | + | chr1_4:10636555-10636574 | None:intergenic | 55.0% | |
! | GAGGCTTTGACGATGACGAG+AGG | + | chr1_4:10636654-10636673 | None:intergenic | 55.0% |
GCACCTTGCAATGGCAGACT+CGG | + | chr1_4:10637069-10637088 | Msa0149760:CDS | 55.0% | |
AGTTCTCTACTCTTGCCCCG+TGG | + | chr1_4:10632844-10632863 | None:intergenic | 55.0% | |
!! | AGGGGTGTTGGCTCTAGCAT+GGG | - | chr1_4:10638385-10638404 | Msa0149750:intron | 55.0% |
GCCCAACTAGGATGGATAGC+TGG | - | chr1_4:10638413-10638432 | Msa0149750:intron | 55.0% | |
! | GTCGGCTTTCAGGCTTCATC+AGG | - | chr1_4:10639448-10639467 | Msa0149750:intron | 55.0% |
ACGGGTAATAGGTCAGGCTC+AGG | - | chr1_4:10639512-10639531 | Msa0149750:intron | 55.0% | |
GGCTATGTAAGGCCTAAGCC+TGG | + | chr1_4:10639558-10639577 | Msa0149780:CDS | 55.0% | |
GCAAGCATCATCCATGGCGA+TGG | - | chr1_4:10639736-10639755 | Msa0149750:intron | 55.0% | |
AGCATCATCCATGGCGATGG+CGG | - | chr1_4:10639739-10639758 | Msa0149750:intron | 55.0% | |
! | AACTGGACAGTGGACTCGTC+AGG | + | chr1_4:10640453-10640472 | None:intergenic | 55.0% |
CGAGTCCACTGTCCAGTTAG+TGG | - | chr1_4:10640455-10640474 | Msa0149750:intron | 55.0% | |
TCGAGCCACTAACTGGACAG+TGG | + | chr1_4:10640463-10640482 | None:intergenic | 55.0% | |
TCAGCAAGCATCACCGATGG+CGG | - | chr1_4:10641471-10641490 | Msa0149750:intron | 55.0% | |
TCAGACCAATCTGCCGCCAT+CGG | + | chr1_4:10641487-10641506 | None:intergenic | 55.0% | |
GTCACGGTGGTGATTTCGGA+TGG | + | chr1_4:10641608-10641627 | None:intergenic | 55.0% | |
CATATCGGTAGAGTGGGTGG+TGG | + | chr1_4:10641813-10641832 | None:intergenic | 55.0% | |
CACCACCCACTCTACCGATA+TGG | - | chr1_4:10641811-10641830 | Msa0149750:intron | 55.0% | |
AGCCATATCGGTAGAGTGGG+TGG | + | chr1_4:10641816-10641835 | None:intergenic | 55.0% | |
! | GGACCATCGATTGAGAACGG+TGG | + | chr1_4:10641928-10641947 | None:intergenic | 55.0% |
AGCTGGACAGTGGAATCCTC+CGG | + | chr1_4:10642186-10642205 | None:intergenic | 55.0% | |
GGATTCCACTGTCCAGCTAG+TGG | - | chr1_4:10642188-10642207 | Msa0149750:intron | 55.0% | |
TTCAGCCACTAGCTGGACAG+TGG | + | chr1_4:10642196-10642215 | None:intergenic | 55.0% | |
AGACCCCTGGAGTTTACTCC+AGG | + | chr1_4:10643356-10643375 | None:intergenic | 55.0% | |
CGGGTTCAGTCCAACTGAGT+TGG | - | chr1_4:10643536-10643555 | Msa0149750:intron | 55.0% | |
TTTGTAGACCACCCCGACCT+AGG | - | chr1_4:10646096-10646115 | Msa0149750:intron | 55.0% | |
ATTCATGGCCATGGCGACGA+AGG | - | chr1_4:10646383-10646402 | Msa0149750:intron | 55.0% | |
! | GAGGAGAGGGTGGTGGTATT+GGG | + | chr1_4:10646691-10646710 | None:intergenic | 55.0% |
CGTAAGCCATATCGGAGGAG+AGG | + | chr1_4:10646705-10646724 | None:intergenic | 55.0% | |
TCCATGGGACGTGACAGCAA+TGG | + | chr1_4:10646877-10646896 | None:intergenic | 55.0% | |
TGGCAGACGTTTACGACCGT+AGG | - | chr1_4:10647171-10647190 | Msa0149750:intron | 55.0% | |
GGCAGCTACCCAAGCGTGTA+AGG | + | chr1_4:10633637-10633656 | None:intergenic | 60.0% | |
CTTCCCACCGCCGATGCATA+CGG | - | chr1_4:10633981-10634000 | Msa0149750:intron | 60.0% | |
! | GTACCGTATGCATCGGCGGT+GGG | + | chr1_4:10633987-10634006 | None:intergenic | 60.0% |
! | AGTACCGTATGCATCGGCGG+TGG | + | chr1_4:10633988-10634007 | None:intergenic | 60.0% |
GCCCTAGCAATGAAGCGGAG+AGG | + | chr1_4:10634025-10634044 | None:intergenic | 60.0% | |
CAACAGAACGTGGCCCCAGT+GGG | + | chr1_4:10636626-10636645 | None:intergenic | 60.0% | |
TCAACAGAACGTGGCCCCAG+TGG | + | chr1_4:10636627-10636646 | None:intergenic | 60.0% | |
! | TGTAGTAGGGGCAGGGGTGT+TGG | - | chr1_4:10638373-10638392 | Msa0149750:intron | 60.0% |
!! | CAGGGGTGTTGGCTCTAGCA+TGG | - | chr1_4:10638384-10638403 | Msa0149750:intron | 60.0% |
!! | GTTGGCTCTAGCATGGGCCA+TGG | - | chr1_4:10638391-10638410 | Msa0149750:intron | 60.0% |
!! | CTCATTTTCGAGGCCTGGCC+TGG | + | chr1_4:10639486-10639505 | None:intergenic | 60.0% |
!! | TGGGTGGAAATGGGCTAGGG+CGG | + | chr1_4:10639586-10639605 | Msa0149780:intron | 60.0% |
CCAATCTACCGCCATCGCCA+TGG | + | chr1_4:10639750-10639769 | Msa0149780:CDS | 60.0% | |
! | CCATGGCGATGGCGGTAGAT+TGG | - | chr1_4:10639747-10639766 | Msa0149750:intron | 60.0% |
CACGTTGTAGGAGTGGGTCG+TGG | + | chr1_4:10640081-10640100 | None:intergenic | 60.0% | |
CACGACCCACTCCTACAACG+TGG | - | chr1_4:10640079-10640098 | Msa0149750:intron | 60.0% | |
TCCATGGGACGTGACGGCAA+TGG | + | chr1_4:10640247-10640266 | None:intergenic | 60.0% | |
CTCGGCACCTTTGCCTGTTC+TGG | - | chr1_4:10640282-10640301 | Msa0149750:intron | 60.0% | |
! | CATCACCGATGGCGGCAGAT+TGG | - | chr1_4:10641479-10641498 | Msa0149750:intron | 60.0% |
GCCATTGCGGTCACTTCCCA+CGG | - | chr1_4:10641976-10641995 | Msa0149750:intron | 60.0% | |
TCCGTGGGAAGTGACCGCAA+TGG | + | chr1_4:10641980-10641999 | None:intergenic | 60.0% | |
! | TCCACTTTCGAGGTGCCAGG+TGG | + | chr1_4:10642585-10642604 | None:intergenic | 60.0% |
CCAATCTGCCTTCGTCGCCA+TGG | + | chr1_4:10646394-10646413 | None:intergenic | 60.0% | |
CCATGGCGACGAAGGCAGAT+TGG | - | chr1_4:10646391-10646410 | Msa0149750:intron | 60.0% | |
!! | GATGGAGGAAGAGCGCCAAC+TGG | + | chr1_4:10646502-10646521 | None:intergenic | 60.0% |
! | GGAGGAGAGGGTGGTGGTAT+TGG | + | chr1_4:10646692-10646711 | None:intergenic | 60.0% |
CATATCGGAGGAGAGGGTGG+TGG | + | chr1_4:10646698-10646717 | None:intergenic | 60.0% | |
CACCACCCTCTCCTCCGATA+TGG | - | chr1_4:10646696-10646715 | Msa0149750:intron | 60.0% | |
AGCCATATCGGAGGAGAGGG+TGG | + | chr1_4:10646701-10646720 | None:intergenic | 60.0% | |
GCCATTGCTGTCACGTCCCA+TGG | - | chr1_4:10646873-10646892 | Msa0149750:intron | 60.0% | |
GCAATCGGGCCGAGAATGGT+AGG | + | chr1_4:10646906-10646925 | None:intergenic | 60.0% | |
ACAGGCAATCGGGCCGAGAA+TGG | + | chr1_4:10646910-10646929 | None:intergenic | 60.0% | |
GGAGGAACTCGGGCACAAGC+AGG | + | chr1_4:10633589-10633608 | None:intergenic | 65.0% | |
GTGGGATCCCACTACCCGCA+AGG | + | chr1_4:10635179-10635198 | None:intergenic | 65.0% | |
!! | TGCGGGTAGTGGGATCCCAC+AGG | - | chr1_4:10635179-10635198 | Msa0149750:intron | 65.0% |
GCATGGGCCATGGCCCAACT+AGG | - | chr1_4:10638401-10638420 | Msa0149750:intron | 65.0% | |
GGGCCATGGCCCAACTAGGA+TGG | - | chr1_4:10638405-10638424 | Msa0149750:intron | 65.0% | |
!! | AAATGGGCTAGGGCGGGGTC+GGG | + | chr1_4:10639579-10639598 | Msa0149780:intron | 65.0% |
!! | GAAATGGGCTAGGGCGGGGT+CGG | + | chr1_4:10639580-10639599 | Msa0149780:intron | 65.0% |
!! | GGTGGAAATGGGCTAGGGCG+GGG | + | chr1_4:10639584-10639603 | Msa0149780:intron | 65.0% |
!! | GGGTGGAAATGGGCTAGGGC+GGG | + | chr1_4:10639585-10639604 | Msa0149780:intron | 65.0% |
CGACGGCGACTAGCATGTGG+TGG | + | chr1_4:10640007-10640026 | None:intergenic | 65.0% | |
CGACGACGGCGACTAGCATG+TGG | + | chr1_4:10640010-10640029 | None:intergenic | 65.0% | |
CTAGTCGCCGTCGTCGTCCT+TGG | - | chr1_4:10640014-10640033 | Msa0149750:intron | 65.0% | |
GCCATTGCCGTCACGTCCCA+TGG | - | chr1_4:10640243-10640262 | Msa0149750:intron | 65.0% | |
! | TCGGTAGAGTGGGTGGTGGC+CGG | + | chr1_4:10641809-10641828 | None:intergenic | 65.0% |
GCCACCTGGCACCTCGAAAG+TGG | - | chr1_4:10642581-10642600 | Msa0149750:intron | 65.0% | |
CTCGGCCCGATTGCCTGTTC+TGG | - | chr1_4:10646912-10646931 | Msa0149750:intron | 65.0% | |
GGGCGGGGTCGGGCTATGTA+AGG | + | chr1_4:10639569-10639588 | Msa0149780:CDS | 70.0% | |
! | GTAGAGTGGGTGGTGGCCGG+TGG | + | chr1_4:10641806-10641825 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 10631998 | 10647502 | 10631998 | ID=Msa0149750;Name=Msa0149750 |
chr1_4 | mRNA | 10631998 | 10647502 | 10631998 | ID=Msa0149750-mRNA-1;Parent=Msa0149750;Name=Msa0149750-mRNA-1;_AED=0.34;_eAED=0.34;_QI=201|0|0.25|1|0|0|4|0|462 |
chr1_4 | exon | 10631998 | 10633129 | 10631998 | ID=Msa0149750-mRNA-1:exon:4549;Parent=Msa0149750-mRNA-1 |
chr1_4 | exon | 10636608 | 10636614 | 10636608 | ID=Msa0149750-mRNA-1:exon:4548;Parent=Msa0149750-mRNA-1 |
chr1_4 | exon | 10640931 | 10641119 | 10640931 | ID=Msa0149750-mRNA-1:exon:4547;Parent=Msa0149750-mRNA-1 |
chr1_4 | exon | 10647241 | 10647502 | 10647241 | ID=Msa0149750-mRNA-1:exon:4546;Parent=Msa0149750-mRNA-1 |
chr1_4 | five_prime_UTR | 10647302 | 10647502 | 10647302 | ID=Msa0149750-mRNA-1:five_prime_utr;Parent=Msa0149750-mRNA-1 |
chr1_4 | CDS | 10647241 | 10647301 | 10647241 | ID=Msa0149750-mRNA-1:cds;Parent=Msa0149750-mRNA-1 |
chr1_4 | CDS | 10640931 | 10641119 | 10640931 | ID=Msa0149750-mRNA-1:cds;Parent=Msa0149750-mRNA-1 |
chr1_4 | CDS | 10636608 | 10636614 | 10636608 | ID=Msa0149750-mRNA-1:cds;Parent=Msa0149750-mRNA-1 |
chr1_4 | CDS | 10631998 | 10633129 | 10631998 | ID=Msa0149750-mRNA-1:cds;Parent=Msa0149750-mRNA-1 |
Gene Sequence |
Protein sequence |