Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153340 | XP_013466746.1 | 80.735 | 898 | 20 | 6 | 1 | 898 | 1 | 745 | 0.0 | 1348 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153340 | sp|Q9ZUL5|CHR19_ARATH | 57.374 | 929 | 198 | 11 | 1 | 897 | 1 | 763 | 0.0 | 1004 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153340 | A0A072VG70 | 80.735 | 898 | 20 | 6 | 1 | 898 | 1 | 745 | 0.0 | 1348 |
Gene ID | Type | Classification |
---|---|---|
Msa0153340 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0153340 | Msa0394690 | 0.804857 | 1.766238e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153340 | MtrunA17_Chr1g0163011 | 80.735 | 898 | 20 | 6 | 1 | 898 | 1 | 745 | 0.0 | 1348 |
Msa0153340 | MtrunA17_Chr1g0205891 | 32.039 | 618 | 226 | 18 | 273 | 873 | 397 | 837 | 4.81e-65 | 237 |
Msa0153340 | MtrunA17_Chr5g0394201 | 30.956 | 617 | 233 | 15 | 273 | 873 | 384 | 823 | 3.87e-64 | 234 |
Msa0153340 | MtrunA17_Chr4g0066741 | 30.693 | 606 | 239 | 16 | 273 | 872 | 209 | 639 | 5.90e-64 | 234 |
Msa0153340 | MtrunA17_Chr5g0403921 | 28.278 | 633 | 262 | 15 | 273 | 883 | 205 | 667 | 2.03e-63 | 228 |
Msa0153340 | MtrunA17_Chr5g0442141 | 29.582 | 622 | 262 | 15 | 274 | 880 | 639 | 1099 | 4.41e-59 | 220 |
Msa0153340 | MtrunA17_Chr4g0052341 | 29.725 | 619 | 253 | 14 | 264 | 867 | 755 | 1206 | 8.48e-59 | 219 |
Msa0153340 | MtrunA17_Chr3g0137091 | 29.647 | 624 | 243 | 14 | 272 | 871 | 309 | 760 | 1.30e-58 | 219 |
Msa0153340 | MtrunA17_Chr3g0095091 | 29.346 | 627 | 257 | 16 | 274 | 885 | 593 | 1048 | 2.61e-56 | 212 |
Msa0153340 | MtrunA17_Chr4g0066651 | 29.288 | 618 | 238 | 16 | 273 | 866 | 1010 | 1452 | 9.39e-54 | 204 |
Msa0153340 | MtrunA17_Chr1g0183681 | 26.688 | 637 | 246 | 17 | 268 | 857 | 407 | 869 | 1.56e-50 | 193 |
Msa0153340 | MtrunA17_Chr7g0232121 | 26.935 | 620 | 274 | 13 | 274 | 870 | 61 | 524 | 3.03e-49 | 188 |
Msa0153340 | MtrunA17_Chr8g0348721 | 27.663 | 629 | 282 | 18 | 228 | 843 | 966 | 1434 | 8.83e-44 | 173 |
Msa0153340 | MtrunA17_Chr7g0248031 | 28.314 | 611 | 272 | 16 | 244 | 843 | 987 | 1442 | 1.27e-43 | 172 |
Msa0153340 | MtrunA17_Chr7g0257101 | 32.948 | 346 | 157 | 9 | 273 | 605 | 599 | 882 | 3.58e-43 | 171 |
Msa0153340 | MtrunA17_Chr7g0257101 | 35.644 | 202 | 78 | 2 | 670 | 871 | 1191 | 1340 | 4.68e-26 | 115 |
Msa0153340 | MtrunA17_Chr1g0175191 | 33.146 | 356 | 152 | 10 | 258 | 603 | 531 | 810 | 4.29e-43 | 171 |
Msa0153340 | MtrunA17_Chr1g0175191 | 51.282 | 117 | 52 | 1 | 762 | 873 | 1096 | 1212 | 1.14e-29 | 127 |
Msa0153340 | MtrunA17_Chr8g0384531 | 26.543 | 648 | 303 | 20 | 273 | 892 | 405 | 907 | 2.70e-40 | 161 |
Msa0153340 | MtrunA17_Chr5g0393461 | 27.288 | 612 | 294 | 19 | 274 | 870 | 212 | 687 | 8.82e-37 | 149 |
Msa0153340 | MtrunA17_Chr4g0017211 | 25.078 | 638 | 300 | 20 | 272 | 873 | 1470 | 1965 | 2.05e-36 | 149 |
Msa0153340 | MtrunA17_Chr2g0286291 | 30.149 | 335 | 158 | 9 | 273 | 604 | 212 | 473 | 2.24e-34 | 142 |
Msa0153340 | MtrunA17_Chr2g0286291 | 38.378 | 185 | 61 | 3 | 689 | 872 | 510 | 642 | 1.81e-24 | 110 |
Msa0153340 | MtrunA17_Chr2g0320751 | 22.556 | 665 | 321 | 19 | 280 | 875 | 463 | 1002 | 4.39e-27 | 119 |
Msa0153340 | MtrunA17_Chr7g0231521 | 33.913 | 230 | 111 | 3 | 667 | 895 | 282 | 471 | 6.66e-25 | 111 |
Msa0153340 | MtrunA17_Chr7g0231521 | 27.876 | 226 | 104 | 4 | 274 | 493 | 61 | 233 | 1.77e-19 | 94.0 |
Msa0153340 | MtrunA17_Chr4g0040301 | 34.135 | 208 | 82 | 3 | 671 | 876 | 380 | 534 | 5.48e-20 | 95.5 |
Msa0153340 | MtrunA17_Chr4g0040301 | 32.500 | 160 | 82 | 6 | 280 | 429 | 18 | 161 | 3.56e-15 | 80.1 |
Msa0153340 | MtrunA17_Chr1g0212331 | 30.055 | 183 | 76 | 1 | 689 | 871 | 887 | 1017 | 2.81e-19 | 93.6 |
Msa0153340 | MtrunA17_Chr1g0168031 | 28.571 | 203 | 92 | 2 | 670 | 871 | 985 | 1135 | 3.48e-17 | 87.0 |
Msa0153340 | MtrunA17_Chr1g0190381 | 42.342 | 111 | 62 | 1 | 767 | 875 | 244 | 354 | 7.47e-17 | 85.1 |
Msa0153340 | MtrunA17_Chr2g0281601 | 28.108 | 185 | 81 | 1 | 687 | 871 | 1148 | 1280 | 2.31e-16 | 84.3 |
Msa0153340 | MtrunA17_Chr4g0069451 | 43.158 | 95 | 51 | 1 | 770 | 864 | 520 | 611 | 2.64e-14 | 77.0 |
Msa0153340 | MtrunA17_Chr4g0024921 | 38.947 | 95 | 58 | 0 | 769 | 863 | 812 | 906 | 4.76e-14 | 76.6 |
Msa0153340 | MtrunA17_Chr1g0149871 | 52.459 | 61 | 27 | 1 | 272 | 332 | 264 | 322 | 2.43e-13 | 72.4 |
Msa0153340 | MtrunA17_Chr7g0233021 | 42.529 | 87 | 49 | 1 | 772 | 857 | 1086 | 1172 | 6.69e-13 | 73.2 |
Msa0153340 | MtrunA17_Chr2g0320781 | 39.506 | 81 | 48 | 1 | 778 | 857 | 153 | 233 | 1.92e-12 | 68.2 |
Msa0153340 | MtrunA17_Chr7g0233001 | 40.741 | 81 | 47 | 1 | 778 | 857 | 381 | 461 | 5.09e-12 | 69.3 |
Msa0153340 | MtrunA17_Chr7g0232991 | 37.634 | 93 | 57 | 1 | 766 | 857 | 508 | 600 | 6.03e-12 | 69.7 |
Msa0153340 | MtrunA17_Chr7g0232971 | 38.889 | 90 | 54 | 1 | 766 | 854 | 1146 | 1235 | 6.09e-12 | 70.1 |
Msa0153340 | MtrunA17_Chr7g0233031 | 41.772 | 79 | 45 | 1 | 774 | 851 | 1101 | 1179 | 8.11e-12 | 69.7 |
Msa0153340 | MtrunA17_Chr7g0255821 | 26.163 | 172 | 96 | 5 | 273 | 427 | 251 | 408 | 3.37e-11 | 67.4 |
Msa0153340 | MtrunA17_Chr4g0047081 | 35.238 | 105 | 67 | 1 | 778 | 881 | 1096 | 1200 | 8.30e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153340 | AT2G02090.1 | 57.374 | 929 | 198 | 11 | 1 | 897 | 1 | 763 | 0.0 | 1004 |
Msa0153340 | AT5G19310.2 | 30.956 | 617 | 238 | 13 | 271 | 873 | 140 | 582 | 2.40e-67 | 241 |
Msa0153340 | AT5G19310.1 | 30.769 | 624 | 244 | 13 | 264 | 873 | 397 | 846 | 5.45e-66 | 240 |
Msa0153340 | AT3G06010.1 | 30.032 | 616 | 241 | 11 | 273 | 873 | 424 | 864 | 1.91e-62 | 230 |
Msa0153340 | AT2G13370.1 | 30.721 | 638 | 259 | 18 | 274 | 895 | 647 | 1117 | 5.66e-60 | 223 |
Msa0153340 | AT2G13370.2 | 30.721 | 638 | 259 | 18 | 274 | 895 | 647 | 1117 | 5.66e-60 | 223 |
Msa0153340 | AT2G13370.3 | 30.721 | 638 | 259 | 18 | 274 | 895 | 647 | 1117 | 5.66e-60 | 223 |
Msa0153340 | AT2G25170.1 | 27.974 | 622 | 256 | 14 | 272 | 871 | 293 | 744 | 5.50e-58 | 217 |
Msa0153340 | AT2G25170.4 | 27.974 | 622 | 256 | 14 | 272 | 871 | 293 | 744 | 5.50e-58 | 217 |
Msa0153340 | AT2G25170.2 | 27.974 | 622 | 256 | 14 | 272 | 871 | 310 | 761 | 6.00e-58 | 217 |
Msa0153340 | AT2G25170.3 | 27.974 | 622 | 256 | 14 | 272 | 871 | 319 | 770 | 8.21e-58 | 216 |
Msa0153340 | AT4G31900.2 | 28.738 | 602 | 250 | 14 | 274 | 871 | 206 | 632 | 8.84e-58 | 216 |
Msa0153340 | AT4G31900.1 | 28.738 | 602 | 250 | 14 | 274 | 871 | 247 | 673 | 1.83e-57 | 215 |
Msa0153340 | AT4G31900.3 | 28.738 | 602 | 250 | 14 | 274 | 871 | 247 | 673 | 2.09e-57 | 215 |
Msa0153340 | AT5G44800.1 | 30.033 | 606 | 246 | 14 | 274 | 867 | 711 | 1150 | 4.80e-57 | 214 |
Msa0153340 | AT2G44980.3 | 26.809 | 705 | 322 | 17 | 212 | 888 | 17 | 555 | 2.79e-52 | 197 |
Msa0153340 | AT2G28290.5 | 28.155 | 618 | 245 | 16 | 273 | 866 | 776 | 1218 | 9.42e-52 | 198 |
Msa0153340 | AT2G28290.1 | 28.155 | 618 | 245 | 16 | 273 | 866 | 775 | 1217 | 9.59e-52 | 198 |
Msa0153340 | AT2G44980.2 | 26.525 | 705 | 325 | 16 | 212 | 888 | 17 | 556 | 1.06e-51 | 196 |
Msa0153340 | AT2G28290.3 | 28.155 | 618 | 245 | 16 | 273 | 866 | 775 | 1217 | 1.15e-51 | 198 |
Msa0153340 | AT2G28290.4 | 28.155 | 618 | 245 | 16 | 273 | 866 | 775 | 1217 | 1.15e-51 | 198 |
Msa0153340 | AT2G28290.6 | 28.155 | 618 | 245 | 16 | 273 | 866 | 776 | 1218 | 1.18e-51 | 198 |
Msa0153340 | AT2G28290.2 | 28.155 | 618 | 245 | 16 | 273 | 866 | 775 | 1217 | 1.30e-51 | 198 |
Msa0153340 | AT2G44980.1 | 26.829 | 697 | 314 | 17 | 212 | 888 | 17 | 537 | 8.90e-50 | 190 |
Msa0153340 | AT2G18760.3 | 27.005 | 611 | 275 | 14 | 268 | 857 | 460 | 920 | 1.06e-49 | 191 |
Msa0153340 | AT2G18760.4 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT2G18760.1 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT2G18760.2 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT2G18760.7 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT2G18760.5 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT2G18760.6 | 27.005 | 611 | 275 | 14 | 268 | 857 | 401 | 861 | 1.35e-49 | 191 |
Msa0153340 | AT3G12810.1 | 32.591 | 359 | 150 | 11 | 258 | 603 | 546 | 825 | 2.48e-41 | 165 |
Msa0153340 | AT3G12810.1 | 37.143 | 210 | 70 | 3 | 671 | 875 | 1075 | 1227 | 2.42e-29 | 127 |
Msa0153340 | AT3G12810.2 | 32.591 | 359 | 150 | 11 | 258 | 603 | 542 | 821 | 2.66e-41 | 165 |
Msa0153340 | AT3G12810.2 | 37.143 | 210 | 70 | 3 | 671 | 875 | 1071 | 1223 | 2.49e-29 | 127 |
Msa0153340 | AT1G03750.1 | 25.762 | 656 | 300 | 17 | 273 | 875 | 160 | 681 | 1.20e-40 | 162 |
Msa0153340 | AT5G63950.1 | 25.949 | 632 | 300 | 18 | 273 | 878 | 398 | 887 | 1.10e-39 | 159 |
Msa0153340 | AT3G54280.1 | 25.772 | 648 | 284 | 22 | 272 | 873 | 1471 | 1967 | 2.36e-39 | 159 |
Msa0153340 | AT3G54280.2 | 25.772 | 648 | 284 | 22 | 272 | 873 | 1502 | 1998 | 3.06e-39 | 159 |
Msa0153340 | AT3G57300.3 | 31.214 | 346 | 163 | 9 | 273 | 605 | 607 | 890 | 6.83e-39 | 157 |
Msa0153340 | AT3G57300.1 | 31.214 | 346 | 163 | 9 | 273 | 605 | 607 | 890 | 7.38e-39 | 157 |
Msa0153340 | AT3G57300.1 | 35.149 | 202 | 79 | 1 | 670 | 871 | 1205 | 1354 | 3.37e-26 | 117 |
Msa0153340 | AT3G57300.4 | 31.214 | 346 | 163 | 9 | 273 | 605 | 607 | 890 | 7.38e-39 | 157 |
Msa0153340 | AT3G57300.4 | 35.149 | 202 | 79 | 1 | 670 | 871 | 1205 | 1354 | 3.37e-26 | 117 |
Msa0153340 | AT5G63950.2 | 25.359 | 627 | 293 | 17 | 273 | 878 | 398 | 870 | 8.39e-38 | 153 |
Msa0153340 | AT3G19210.3 | 26.765 | 609 | 301 | 18 | 274 | 870 | 208 | 683 | 1.97e-36 | 148 |
Msa0153340 | AT3G19210.1 | 26.765 | 609 | 301 | 18 | 274 | 870 | 208 | 683 | 2.82e-36 | 148 |
Msa0153340 | AT3G57300.2 | 28.496 | 379 | 163 | 10 | 273 | 605 | 607 | 923 | 4.39e-35 | 145 |
Msa0153340 | AT3G57300.2 | 35.149 | 202 | 79 | 1 | 670 | 871 | 1238 | 1387 | 3.84e-26 | 116 |
Msa0153340 | AT3G19210.2 | 26.437 | 609 | 301 | 18 | 274 | 870 | 208 | 681 | 5.52e-35 | 144 |
Msa0153340 | AT3G06400.2 | 29.552 | 335 | 160 | 9 | 273 | 604 | 210 | 471 | 4.83e-34 | 141 |
Msa0153340 | AT3G06400.2 | 36.757 | 185 | 64 | 2 | 689 | 872 | 508 | 640 | 2.45e-23 | 107 |
Msa0153340 | AT3G06400.1 | 29.552 | 335 | 160 | 9 | 273 | 604 | 210 | 471 | 4.86e-34 | 141 |
Msa0153340 | AT3G06400.1 | 36.757 | 185 | 64 | 2 | 689 | 872 | 508 | 640 | 2.47e-23 | 107 |
Msa0153340 | AT3G06400.3 | 29.552 | 335 | 160 | 9 | 273 | 604 | 210 | 471 | 5.18e-34 | 141 |
Msa0153340 | AT3G06400.3 | 36.757 | 185 | 64 | 2 | 689 | 872 | 508 | 640 | 2.58e-23 | 107 |
Msa0153340 | AT5G18620.1 | 29.326 | 341 | 153 | 9 | 273 | 604 | 215 | 476 | 7.50e-34 | 141 |
Msa0153340 | AT5G18620.1 | 36.216 | 185 | 65 | 2 | 689 | 872 | 513 | 645 | 1.23e-22 | 105 |
Msa0153340 | AT5G18620.2 | 29.326 | 341 | 153 | 9 | 273 | 604 | 215 | 476 | 7.52e-34 | 141 |
Msa0153340 | AT5G18620.2 | 36.216 | 185 | 65 | 2 | 689 | 872 | 513 | 645 | 1.18e-22 | 105 |
Msa0153340 | AT5G66750.1 | 26.980 | 404 | 196 | 13 | 225 | 604 | 176 | 504 | 7.43e-33 | 137 |
Msa0153340 | AT5G66750.1 | 35.979 | 189 | 64 | 3 | 686 | 871 | 539 | 673 | 7.31e-25 | 111 |
Msa0153340 | AT5G22750.1 | 22.992 | 722 | 316 | 18 | 273 | 875 | 415 | 1015 | 1.28e-31 | 134 |
Msa0153340 | AT2G46020.2 | 35.938 | 192 | 97 | 6 | 244 | 429 | 974 | 1145 | 2.68e-23 | 107 |
Msa0153340 | AT2G46020.2 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1199 | 1429 | 1.88e-19 | 95.1 |
Msa0153340 | AT2G46020.3 | 35.938 | 192 | 97 | 6 | 244 | 429 | 974 | 1145 | 2.68e-23 | 107 |
Msa0153340 | AT2G46020.3 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1199 | 1429 | 1.88e-19 | 95.1 |
Msa0153340 | AT2G46020.4 | 35.938 | 192 | 97 | 6 | 244 | 429 | 974 | 1145 | 2.68e-23 | 107 |
Msa0153340 | AT2G46020.4 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1199 | 1429 | 1.88e-19 | 95.1 |
Msa0153340 | AT2G46020.5 | 36.508 | 189 | 99 | 5 | 244 | 429 | 974 | 1144 | 9.87e-23 | 105 |
Msa0153340 | AT2G46020.5 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1198 | 1428 | 1.59e-19 | 95.5 |
Msa0153340 | AT2G46020.1 | 36.508 | 189 | 99 | 5 | 244 | 429 | 974 | 1144 | 9.87e-23 | 105 |
Msa0153340 | AT2G46020.1 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1198 | 1428 | 1.59e-19 | 95.5 |
Msa0153340 | AT2G46020.6 | 36.508 | 189 | 99 | 5 | 244 | 429 | 974 | 1144 | 9.87e-23 | 105 |
Msa0153340 | AT2G46020.6 | 29.674 | 337 | 128 | 8 | 510 | 843 | 1198 | 1428 | 1.59e-19 | 95.5 |
Msa0153340 | AT5G43530.1 | 29.545 | 220 | 100 | 4 | 670 | 887 | 1108 | 1274 | 9.22e-18 | 89.4 |
Msa0153340 | AT1G08600.1 | 41.441 | 111 | 63 | 1 | 767 | 875 | 1150 | 1260 | 7.73e-17 | 86.3 |
Msa0153340 | AT1G08600.4 | 41.441 | 111 | 63 | 1 | 767 | 875 | 1171 | 1281 | 8.04e-17 | 86.3 |
Msa0153340 | AT1G08600.3 | 41.441 | 111 | 63 | 1 | 767 | 875 | 1171 | 1281 | 8.04e-17 | 86.3 |
Msa0153340 | AT1G08600.2 | 41.441 | 111 | 63 | 1 | 767 | 875 | 1171 | 1281 | 8.04e-17 | 86.3 |
Msa0153340 | AT1G11100.5 | 26.316 | 190 | 88 | 1 | 686 | 875 | 927 | 1064 | 1.07e-16 | 85.9 |
Msa0153340 | AT1G11100.3 | 26.316 | 190 | 88 | 1 | 686 | 875 | 971 | 1108 | 1.15e-16 | 85.9 |
Msa0153340 | AT1G11100.1 | 26.316 | 190 | 88 | 1 | 686 | 875 | 1070 | 1207 | 1.33e-16 | 85.5 |
Msa0153340 | AT1G50410.2 | 29.508 | 183 | 77 | 2 | 689 | 871 | 828 | 958 | 1.39e-16 | 85.5 |
Msa0153340 | AT1G50410.1 | 29.508 | 183 | 77 | 2 | 689 | 871 | 828 | 958 | 1.39e-16 | 85.5 |
Msa0153340 | AT1G50410.3 | 29.508 | 183 | 77 | 2 | 689 | 871 | 828 | 958 | 1.39e-16 | 85.5 |
Msa0153340 | AT1G11100.2 | 26.316 | 190 | 88 | 1 | 686 | 875 | 1113 | 1250 | 1.54e-16 | 85.5 |
Msa0153340 | AT1G11100.4 | 26.316 | 190 | 88 | 1 | 686 | 875 | 1114 | 1251 | 1.56e-16 | 85.5 |
Msa0153340 | AT1G61140.3 | 27.513 | 189 | 85 | 1 | 683 | 871 | 961 | 1097 | 1.78e-16 | 85.1 |
Msa0153340 | AT1G05120.2 | 39.167 | 120 | 70 | 2 | 769 | 887 | 753 | 870 | 2.55e-16 | 84.3 |
Msa0153340 | AT1G05120.1 | 39.167 | 120 | 70 | 2 | 769 | 887 | 710 | 827 | 2.77e-16 | 84.3 |
Msa0153340 | AT1G61140.1 | 27.513 | 189 | 85 | 1 | 683 | 871 | 1119 | 1255 | 2.79e-16 | 84.7 |
Msa0153340 | AT3G20010.3 | 29.508 | 183 | 77 | 3 | 689 | 871 | 628 | 758 | 9.47e-16 | 82.4 |
Msa0153340 | AT3G20010.2 | 29.508 | 183 | 77 | 3 | 689 | 871 | 603 | 733 | 1.02e-15 | 82.4 |
Msa0153340 | AT3G20010.1 | 27.322 | 183 | 81 | 1 | 689 | 871 | 894 | 1024 | 1.82e-15 | 81.6 |
Msa0153340 | AT3G20010.5 | 27.322 | 183 | 81 | 1 | 689 | 871 | 894 | 1024 | 1.82e-15 | 81.6 |
Msa0153340 | AT3G20010.7 | 27.322 | 183 | 81 | 1 | 689 | 871 | 894 | 1024 | 1.82e-15 | 81.6 |
Msa0153340 | AT1G02670.6 | 37.963 | 108 | 67 | 0 | 769 | 876 | 540 | 647 | 1.67e-14 | 78.2 |
Msa0153340 | AT1G02670.6 | 29.101 | 189 | 113 | 5 | 251 | 429 | 96 | 273 | 7.03e-13 | 73.2 |
Msa0153340 | AT1G02670.3 | 37.963 | 108 | 67 | 0 | 769 | 876 | 567 | 674 | 1.83e-14 | 78.2 |
Msa0153340 | AT1G02670.3 | 29.101 | 189 | 113 | 5 | 251 | 429 | 123 | 300 | 1.04e-12 | 72.4 |
Msa0153340 | AT1G48310.2 | 38.462 | 104 | 64 | 0 | 772 | 875 | 522 | 625 | 2.53e-14 | 77.8 |
Msa0153340 | AT1G02670.7 | 37.963 | 108 | 67 | 0 | 769 | 876 | 544 | 651 | 2.60e-14 | 77.8 |
Msa0153340 | AT1G02670.7 | 29.101 | 189 | 113 | 5 | 251 | 429 | 123 | 300 | 4.01e-13 | 73.9 |
Msa0153340 | AT1G48310.1 | 38.462 | 104 | 64 | 0 | 772 | 875 | 517 | 620 | 2.62e-14 | 77.8 |
Msa0153340 | AT1G48310.3 | 40.860 | 93 | 55 | 0 | 772 | 864 | 517 | 609 | 2.78e-14 | 77.4 |
Msa0153340 | AT1G02670.1 | 37.963 | 108 | 67 | 0 | 769 | 876 | 555 | 662 | 3.03e-14 | 77.4 |
Msa0153340 | AT1G02670.1 | 29.101 | 189 | 113 | 5 | 251 | 429 | 134 | 311 | 3.36e-13 | 73.9 |
Msa0153340 | AT5G05130.1 | 35.185 | 108 | 68 | 1 | 761 | 866 | 747 | 854 | 5.86e-13 | 73.6 |
Msa0153340 | AT3G16600.1 | 42.222 | 90 | 48 | 1 | 786 | 871 | 498 | 587 | 8.66e-13 | 72.8 |
Msa0153340 | AT3G16600.1 | 33.333 | 189 | 84 | 7 | 273 | 429 | 77 | 255 | 1.93e-12 | 71.6 |
Msa0153340 | AT1G02670.4 | 29.101 | 189 | 113 | 5 | 251 | 429 | 123 | 300 | 9.77e-13 | 72.4 |
Msa0153340 | AT1G02670.5 | 29.101 | 189 | 113 | 5 | 251 | 429 | 96 | 273 | 1.09e-12 | 72.4 |
Msa0153340 | AT1G02670.2 | 29.101 | 189 | 113 | 5 | 251 | 429 | 123 | 300 | 1.63e-12 | 71.6 |
Msa0153340 | AT1G05490.1 | 38.235 | 102 | 58 | 3 | 751 | 851 | 1236 | 1333 | 1.18e-11 | 69.7 |
Find 233 sgRNAs with CRISPR-Local
Find 736 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCAACTTCTCCAATTTCT+AGG | 0.197144 | 1_4:-16606231 | Msa0153340:five_prime_UTR |
AGTCGTATGAAGTCTATATT+AGG | 0.202585 | 1_4:-16601809 | Msa0153340:CDS |
TGGCAATCTTCCAAATTTCT+AGG | 0.206347 | 1_4:+16596426 | None:intergenic |
AATGATCCATTTAGACAAAT+TGG | 0.216889 | 1_4:-16596486 | Msa0153340:three_prime_UTR |
GCTTTGCCACCCTAGAAATT+TGG | 0.224803 | 1_4:-16596436 | Msa0153340:three_prime_UTR |
GCTTTCAAGTTTGTGTTTAT+TGG | 0.226654 | 1_4:-16604847 | Msa0153340:CDS |
GGAGAGTTGTTTGGTTCTTC+TGG | 0.231117 | 1_4:-16605739 | Msa0153340:CDS |
GACATCAATGCTTGATATAT+TGG | 0.245544 | 1_4:-16599187 | Msa0153340:CDS |
CCTTGTAATGAATTTGTTAC+AGG | 0.258334 | 1_4:-16601930 | Msa0153340:CDS |
AGTTTGTCCTGCTTCTGTTT+TGG | 0.261009 | 1_4:-16604495 | Msa0153340:CDS |
CGAACCATCCCTTGTTGATT+AGG | 0.264025 | 1_4:-16601302 | Msa0153340:CDS |
GGGTGGCCAATTTGTCTAAA+TGG | 0.269976 | 1_4:+16596480 | None:intergenic |
CTGCATCCAATAGGTGCTTT+TGG | 0.276315 | 1_4:-16601237 | Msa0153340:CDS |
GCTGCATCACATCAGATTTC+AGG | 0.290922 | 1_4:+16601768 | None:intergenic |
GGAGGAGGAGGTGGTGGTTG+CGG | 0.291077 | 1_4:+16606072 | None:intergenic |
CGATAATATCCTTGATGAAT+TGG | 0.297062 | 1_4:-16605992 | Msa0153340:CDS |
AATCACTTGCACAACGATTC+TGG | 0.297609 | 1_4:-16604530 | Msa0153340:CDS |
GCCCATTTCATCTGCCAATA+TGG | 0.301343 | 1_4:+16604686 | None:intergenic |
TGATATATTGGAGTGGGCTT+TGG | 0.308912 | 1_4:-16599175 | Msa0153340:CDS |
AAGACTAGTGTACATCAATT+TGG | 0.312111 | 1_4:+16596406 | None:intergenic |
AAGATTTCTGGTTATCACTA+TGG | 0.312136 | 1_4:-16605054 | Msa0153340:intron |
TTCAGGCGCCGTAAAATAAA+TGG | 0.317710 | 1_4:+16601785 | None:intergenic |
CTTCTGGTGCGGTTTGTGAT+AGG | 0.319349 | 1_4:-16605723 | Msa0153340:CDS |
TGCTGCTGTTCTAGAATCTA+TGG | 0.339044 | 1_4:-16596675 | Msa0153340:CDS |
GCAGAAGTGTGCGAGGATTT+CGG | 0.339211 | 1_4:-16605773 | Msa0153340:CDS |
GAGTGGGCTTTGGATGTCAT+TGG | 0.340472 | 1_4:-16599165 | Msa0153340:CDS |
CAGACGAGAAGAACATTAAA+TGG | 0.340627 | 1_4:+16604350 | None:intergenic |
CCTTCCATCAAGCCGTTTGT+AGG | 0.346388 | 1_4:+16599137 | None:intergenic |
AAATACCTGTATATGGTTAC+AGG | 0.349636 | 1_4:+16596877 | None:intergenic |
TCTAAATGGATCATTAAAAT+CGG | 0.353484 | 1_4:+16596494 | None:intergenic |
TTCATTACAAGGCTTACTTC+AGG | 0.366763 | 1_4:+16601941 | None:intergenic |
AGCCATATTGGCAGATGAAA+TGG | 0.368777 | 1_4:-16604688 | Msa0153340:CDS |
CCTCTCTGCTACCTGTGTGC+TGG | 0.369751 | 1_4:+16597083 | None:intergenic |
TGAATTTGTTACAGGAGTTA+TGG | 0.377752 | 1_4:-16601922 | Msa0153340:CDS |
GGTATTCGACGTTTGGAATA+CGG | 0.379929 | 1_4:+16606318 | None:intergenic |
TAGGATCCCCTTTCTATCAT+TGG | 0.390282 | 1_4:+16599413 | None:intergenic |
GGGCCTTGGCAAAACGGTTC+AGG | 0.392499 | 1_4:-16604667 | Msa0153340:intron |
AGACGCAAATGAAGATGATT+TGG | 0.394410 | 1_4:-16605809 | Msa0153340:CDS |
GCATAACATGTTTATCTGAT+AGG | 0.397941 | 1_4:+16599394 | None:intergenic |
AGCTCCACTTCCAACGCTTC+AGG | 0.400293 | 1_4:+16604192 | None:intergenic |
AATTAGCAAATACCTGTATA+TGG | 0.403562 | 1_4:+16596870 | None:intergenic |
GCGTAGGCGTAGGTGGAAAA+AGG | 0.403581 | 1_4:+16606297 | None:intergenic |
AGTGGGCTTTGGATGTCATT+GGG | 0.405126 | 1_4:-16599164 | Msa0153340:CDS |
TTGAATTCCTTGTCCAAGTC+AGG | 0.408175 | 1_4:-16604383 | Msa0153340:CDS |
GCTGCTCCGACGGCGAAACC+TGG | 0.408676 | 1_4:-16605940 | Msa0153340:CDS |
TGCGGTTTGTGATAGGTATT+CGG | 0.411479 | 1_4:-16605716 | Msa0153340:CDS |
TCAAAGCCAAAAGCACCTAT+TGG | 0.413493 | 1_4:+16601231 | None:intergenic |
CTCTCTGCTACCTGTGTGCT+GGG | 0.413800 | 1_4:+16597084 | None:intergenic |
CTATAGGTAGATAGTTCAAT+AGG | 0.415876 | 1_4:-16596354 | Msa0153340:three_prime_UTR |
CATGTGTCATACAGCCATAT+TGG | 0.425524 | 1_4:-16604700 | Msa0153340:intron |
CAATTCATCAAGGATATTAT+CGG | 0.427484 | 1_4:+16605993 | None:intergenic |
TGTCTTTAGTACCGATTTCA+AGG | 0.429087 | 1_4:+16596459 | None:intergenic |
TTCGGAAGTTGAATCTTCTT+CGG | 0.429991 | 1_4:-16605698 | Msa0153340:CDS |
GGACAAGGCTTAAACTTAAC+CGG | 0.431002 | 1_4:-16596991 | Msa0153340:CDS |
GAAGAGGATGCTGGAGGTAG+TGG | 0.431204 | 1_4:-16605889 | Msa0153340:CDS |
TTTGTGTGTGCCCTAGAAAT+TGG | 0.431729 | 1_4:+16606220 | None:intergenic |
TTGGAGAACAATACTTGAAA+TGG | 0.437308 | 1_4:+16597139 | None:intergenic |
GCTCCCGAGTTTGTGTTTGT+TGG | 0.438071 | 1_4:-16605113 | Msa0153340:CDS |
CTGGATAATGCAGGCTTTAG+CGG | 0.439398 | 1_4:-16599265 | Msa0153340:intron |
ATGACATGAATAATCTCTAT+AGG | 0.439442 | 1_4:-16596370 | Msa0153340:three_prime_UTR |
TAAATTATTGATTGAGCCAA+TGG | 0.442963 | 1_4:-16596589 | Msa0153340:exon |
ATCTCTCCCATCGTCTTCTC+AGG | 0.444051 | 1_4:+16596629 | None:intergenic |
TTGACCTACAAACGGCTTGA+TGG | 0.446547 | 1_4:-16599141 | Msa0153340:CDS |
TACTTTGGACAGAGTTATAG+AGG | 0.446614 | 1_4:-16601205 | Msa0153340:CDS |
GTGTAGTAACAGCTACTGCC+AGG | 0.447030 | 1_4:-16602039 | Msa0153340:CDS |
TGTTTACGTCGAGAGCTTTG+TGG | 0.450004 | 1_4:+16597772 | None:intergenic |
ACGAAATCTCCGACGACGAA+TGG | 0.451974 | 1_4:-16606179 | Msa0153340:CDS |
GAAGATCGTTGCCATCGAAT+TGG | 0.455443 | 1_4:-16596910 | Msa0153340:CDS |
CAATGCAGGAGCTTTGTTCA+AGG | 0.456372 | 1_4:+16596267 | None:intergenic |
GGAGGAGGTGGTGGTTGCGG+TGG | 0.460566 | 1_4:+16606075 | None:intergenic |
TGCTGTTGTTGTATCGGAAG+AGG | 0.460864 | 1_4:-16605492 | Msa0153340:CDS |
ATCGTAAAATCCTGAAGCGT+TGG | 0.466630 | 1_4:-16604202 | Msa0153340:CDS |
AACCAACGCTTGATGCTGAC+AGG | 0.467572 | 1_4:-16604086 | Msa0153340:CDS |
GCTAGGAAGCTGCATCCAAT+AGG | 0.467747 | 1_4:-16601246 | Msa0153340:CDS |
TGTCGTAATGGAAAAGCAAC+AGG | 0.468244 | 1_4:-16601586 | Msa0153340:CDS |
GATGAGGATGAAGAGGATGC+TGG | 0.469429 | 1_4:-16605898 | Msa0153340:CDS |
TTAAAGCCGTATCAGCTTGT+CGG | 0.470384 | 1_4:-16605526 | Msa0153340:CDS |
GTCGTATGAAGTCTATATTA+GGG | 0.474577 | 1_4:-16601808 | Msa0153340:CDS |
ACAGACGAAGGAGGAGGAGG+AGG | 0.476344 | 1_4:+16606060 | None:intergenic |
CGAAATCTCCGACGACGAAT+GGG | 0.477170 | 1_4:-16606178 | Msa0153340:CDS |
TGCTGGAGGTAGTGGTGGTG+TGG | 0.478844 | 1_4:-16605881 | Msa0153340:CDS |
TTGAGCCAATGGAAACGCTT+AGG | 0.479349 | 1_4:-16596578 | Msa0153340:three_prime_UTR |
AAATTGGCCACCCTTGAAAT+CGG | 0.481077 | 1_4:-16596470 | Msa0153340:three_prime_UTR |
TTGGCAGATGAAATGGGCCT+TGG | 0.483542 | 1_4:-16604681 | Msa0153340:CDS |
CTGCTTGTCTATCAATCTGT+GGG | 0.483659 | 1_4:+16596932 | None:intergenic |
TGCTTGCTTTCAACTAGAGC+TGG | 0.483853 | 1_4:-16597015 | Msa0153340:CDS |
TTCAACTTCTCCAATTTCTA+GGG | 0.486860 | 1_4:-16606230 | Msa0153340:five_prime_UTR |
CCTGTAACAAATTCATTACA+AGG | 0.487153 | 1_4:+16601930 | None:intergenic |
TTATGGTACCAATGATAGAA+AGG | 0.487592 | 1_4:-16599421 | Msa0153340:CDS |
GGCAATCTTCCAAATTTCTA+GGG | 0.487708 | 1_4:+16596427 | None:intergenic |
GATAGAGATGACAGATTGAC+AGG | 0.489265 | 1_4:+16601998 | None:intergenic |
AAAGATTCGAGAGGCGGAGG+AGG | 0.490488 | 1_4:+16606108 | None:intergenic |
TATGGTACCAATGATAGAAA+GGG | 0.493526 | 1_4:-16599420 | Msa0153340:CDS |
GGCGGCTGCTGCTGCTCCGA+CGG | 0.494550 | 1_4:-16605950 | Msa0153340:CDS |
TCTGCTTGTCTATCAATCTG+TGG | 0.496313 | 1_4:+16596931 | None:intergenic |
TCTATGGAAGAGATCAAAGA+AGG | 0.496615 | 1_4:-16596659 | Msa0153340:CDS |
GTCGGAGATTTCGTATAACT+CGG | 0.497644 | 1_4:+16606188 | None:intergenic |
GCCATATTGGCAGATGAAAT+GGG | 0.497867 | 1_4:-16604687 | Msa0153340:CDS |
TGTCATGCTGCGAAGTAGAC+TGG | 0.498323 | 1_4:+16597172 | None:intergenic |
CAAAGCCTGTAACCATATAC+AGG | 0.498431 | 1_4:-16596882 | Msa0153340:intron |
TATGCTTTCTGCAAAATGTC+GGG | 0.500013 | 1_4:-16599376 | Msa0153340:intron |
AATCTGTCATCTCTATCTGT+TGG | 0.500766 | 1_4:-16601992 | Msa0153340:CDS |
GTAGAAGATTACCCGGTGAA+TGG | 0.500798 | 1_4:+16601158 | None:intergenic |
TTCAACTGAAGATGAAATTG+AGG | 0.501071 | 1_4:-16605842 | Msa0153340:CDS |
TTTCTGTCCTTCAATATCAC+GGG | 0.502860 | 1_4:-16604433 | Msa0153340:CDS |
CACTGCAGGCTGGTGACAAA+GGG | 0.505063 | 1_4:-16596749 | Msa0153340:intron |
GAAGTGGAGCTGTGTGCTGA+TGG | 0.505582 | 1_4:-16604180 | Msa0153340:CDS |
TGAAATGGGCCTTGGCAAAA+CGG | 0.505899 | 1_4:-16604673 | Msa0153340:CDS |
AAACTTAACCGGAGCTGATA+CGG | 0.507295 | 1_4:-16596980 | Msa0153340:CDS |
GTGCAGACCCGTGATATTGA+AGG | 0.508019 | 1_4:+16604426 | None:intergenic |
TTGTTGTATCGGAAGAGGAT+TGG | 0.510251 | 1_4:-16605487 | Msa0153340:CDS |
TAGAAAGATTCGAGAGGCGG+AGG | 0.510394 | 1_4:+16606105 | None:intergenic |
GAGATTGCAAAGAGAAAGCT+AGG | 0.510912 | 1_4:-16596704 | Msa0153340:CDS |
CTAAATGGATCATTAAAATC+GGG | 0.513635 | 1_4:+16596495 | None:intergenic |
CTACTGCCAGGGAAAACAAA+AGG | 0.514391 | 1_4:-16602027 | Msa0153340:CDS |
TTATGCTTTCTGCAAAATGT+CGG | 0.515979 | 1_4:-16599377 | Msa0153340:CDS |
AAATCCTGAAGCGTTGGAAG+TGG | 0.516959 | 1_4:-16604196 | Msa0153340:CDS |
GGATGAGGCACATGCTTTGA+AGG | 0.517420 | 1_4:-16604159 | Msa0153340:CDS |
GCAATCGTCGTCGTCGGAAA+CGG | 0.522024 | 1_4:+16606035 | None:intergenic |
TGGAGGAGGCAATCCTGACT+TGG | 0.523980 | 1_4:+16604370 | None:intergenic |
CTCCGTCCAGGTTTCGCCGT+CGG | 0.524422 | 1_4:+16605934 | None:intergenic |
ATGTGATGCAGCAACTTGTT+CGG | 0.525569 | 1_4:-16601757 | Msa0153340:CDS |
TCATTGGGTTGACCTACAAA+CGG | 0.530604 | 1_4:-16599149 | Msa0153340:CDS |
CCACTGCAGGCTGGTGACAA+AGG | 0.531295 | 1_4:-16596750 | Msa0153340:intron |
ATCGTGCTGTTTCACAAGCT+CGG | 0.532030 | 1_4:-16601533 | Msa0153340:CDS |
AGGATTTCGGTGGAGTTGAA+AGG | 0.532985 | 1_4:-16605760 | Msa0153340:CDS |
GCAGGTTCAATATGTCGTAA+TGG | 0.533569 | 1_4:-16601598 | Msa0153340:intron |
TTGTATCGGAAGAGGATTGG+AGG | 0.533601 | 1_4:-16605484 | Msa0153340:CDS |
TTCGGTTAGAATTGTTACTC+AGG | 0.533772 | 1_4:-16605680 | Msa0153340:intron |
AATGAAGGATGTTTCAATGC+AGG | 0.533963 | 1_4:+16596253 | None:intergenic |
TCAACTAGAGCTGGTGGACA+AGG | 0.534658 | 1_4:-16597006 | Msa0153340:CDS |
AATCACAACCGTATCAGCTC+CGG | 0.534881 | 1_4:+16596972 | None:intergenic |
GCAACAGGAACATGCTTACA+AGG | 0.535721 | 1_4:-16601571 | Msa0153340:CDS |
ACAGGAGTTATGGTCTATGT+TGG | 0.535877 | 1_4:-16601912 | Msa0153340:CDS |
GAGTTGAAAGGAGAGTTGTT+TGG | 0.536075 | 1_4:-16605748 | Msa0153340:CDS |
GAGAGGAAAGTGACAAGCGC+GGG | 0.536720 | 1_4:+16606258 | None:intergenic |
TTAACACCGACAAGCTGATA+CGG | 0.537008 | 1_4:+16605520 | None:intergenic |
AGAGTAAGGAAAGCAGCACT+TGG | 0.537301 | 1_4:+16597120 | None:intergenic |
GAGTCAAATAGTAAAGAGTA+AGG | 0.538804 | 1_4:+16597106 | None:intergenic |
TTCAACGCAATCGTCGTCGT+CGG | 0.539439 | 1_4:+16606029 | None:intergenic |
ACAATGACTTCTCCATTCAC+CGG | 0.542504 | 1_4:-16601170 | Msa0153340:CDS |
GGCGTAGGCGTAGGCGTAGG+TGG | 0.543007 | 1_4:+16606290 | None:intergenic |
TGACCACTCTTCTTTAGTGA+TGG | 0.544085 | 1_4:+16599234 | None:intergenic |
CTATGGAAGAGATCAAAGAA+GGG | 0.544598 | 1_4:-16596658 | Msa0153340:CDS |
GCAAATGAAGATGATTTGGT+TGG | 0.545650 | 1_4:-16605805 | Msa0153340:CDS |
TGCTACAGCAATGAGGTCAA+TGG | 0.546990 | 1_4:+16597802 | None:intergenic |
GTGATATTGAAGGACAGAAA+AGG | 0.551063 | 1_4:+16604436 | None:intergenic |
GGAGAAGTTGAAAATGAGAG+AGG | 0.553214 | 1_4:+16606241 | None:intergenic |
GTTACAGACGAAGGAGGAGG+AGG | 0.555319 | 1_4:+16606057 | None:intergenic |
AGCTGATACGGCTTTAACAA+CGG | 0.555410 | 1_4:+16605532 | None:intergenic |
GAGGTTTATTATAGATGATG+AGG | 0.556603 | 1_4:-16605914 | Msa0153340:CDS |
AATGCTTGATATATTGGAGT+GGG | 0.556860 | 1_4:-16599181 | Msa0153340:CDS |
TATAGATGATGAGGATGAAG+AGG | 0.557091 | 1_4:-16605905 | Msa0153340:CDS |
TCGGAGATTTCGTATAACTC+GGG | 0.560591 | 1_4:+16606189 | None:intergenic |
CTCCGACGGCGAAACCTGGA+CGG | 0.562120 | 1_4:-16605936 | Msa0153340:CDS |
CAATGACTTCTCCATTCACC+GGG | 0.563438 | 1_4:-16601169 | Msa0153340:intron |
CATGAGAGCGTCATCAGTCG+CGG | 0.564860 | 1_4:-16606344 | Msa0153340:five_prime_UTR |
AAAGAAAGAAGTGCAAACCT+AGG | 0.567163 | 1_4:+16596521 | None:intergenic |
TTTAGTACCGATTTCAAGGG+TGG | 0.569986 | 1_4:+16596463 | None:intergenic |
GATGATGTTGATGTTGCTTG+TGG | 0.570098 | 1_4:-16605577 | Msa0153340:CDS |
TTCGCCTAATCAACAAGGGA+TGG | 0.570492 | 1_4:+16601298 | None:intergenic |
ATAAACCTAAGCGTTTCCAT+TGG | 0.570590 | 1_4:+16596573 | None:intergenic |
CGGTTGAAAATTCGAATCCT+CGG | 0.571272 | 1_4:+16605552 | None:intergenic |
AGAAGAACATTAAATGGAGG+AGG | 0.574338 | 1_4:+16604356 | None:intergenic |
TTCTTGAAGTTCTACCTCGA+CGG | 0.575172 | 1_4:-16601476 | Msa0153340:CDS |
AGGATGTTGTTCGCTTTGCT+AGG | 0.576825 | 1_4:-16601263 | Msa0153340:CDS |
AAGAAAGAAGTGCAAACCTA+GGG | 0.576881 | 1_4:+16596522 | None:intergenic |
GACAAGCGCGGGGAATGTAA+AGG | 0.577320 | 1_4:+16606269 | None:intergenic |
TGTTCCAACAAACACAAACT+CGG | 0.577785 | 1_4:+16605109 | None:intergenic |
TCAATAATTTAACAAAATTG+CGG | 0.578893 | 1_4:+16596601 | None:intergenic |
GTCTTTAGTACCGATTTCAA+GGG | 0.580984 | 1_4:+16596460 | None:intergenic |
GCTTTGTTTGACCAATTCGA+TGG | 0.581682 | 1_4:+16596899 | None:intergenic |
TCCCTGTCAGCATCAAGCGT+TGG | 0.583066 | 1_4:+16604084 | None:intergenic |
TAGGCGAATTTATAATGATG+AGG | 0.585416 | 1_4:-16601283 | Msa0153340:CDS |
CGCGGGGAATGTAAAGGCGT+AGG | 0.591391 | 1_4:+16606275 | None:intergenic |
TCTATAATAAACCTCCGTCC+AGG | 0.592594 | 1_4:+16605922 | None:intergenic |
GTGATTCTCCCATTCGTCGT+CGG | 0.594242 | 1_4:+16606170 | None:intergenic |
CCTACAAACGGCTTGATGGA+AGG | 0.595176 | 1_4:-16599137 | Msa0153340:intron |
GACATGCCTGAGAAGACGAT+GGG | 0.595911 | 1_4:-16596635 | Msa0153340:CDS |
CAGTATCATCCAATTCATCA+AGG | 0.597641 | 1_4:+16605983 | None:intergenic |
ATTGAAGGACAGAAAAGGAC+GGG | 0.598964 | 1_4:+16604441 | None:intergenic |
AGAGGCGGAGGAGGAGAACG+AGG | 0.600254 | 1_4:+16606117 | None:intergenic |
ACGGTTACAGACGAAGGAGG+AGG | 0.603247 | 1_4:+16606054 | None:intergenic |
GAGGATGCTGGAGGTAGTGG+TGG | 0.604373 | 1_4:-16605886 | Msa0153340:CDS |
GAGCTGTGTGCTGATGGATG+AGG | 0.605324 | 1_4:-16604174 | Msa0153340:CDS |
TACGGTTGTGATTCATGACA+TGG | 0.608110 | 1_4:-16596962 | Msa0153340:CDS |
TAATAGAAAGATTCGAGAGG+CGG | 0.608602 | 1_4:+16606102 | None:intergenic |
GTTCCAACAAACACAAACTC+GGG | 0.608639 | 1_4:+16605110 | None:intergenic |
ATGAGAGCGTCATCAGTCGC+GGG | 0.608869 | 1_4:-16606343 | Msa0153340:five_prime_UTR |
GTTGTTTGGTTCTTCTGGTG+CGG | 0.609444 | 1_4:-16605734 | Msa0153340:CDS |
GCAGGACAAACTATAAGATG+TGG | 0.609749 | 1_4:+16604506 | None:intergenic |
GAATGTAAAGGCGTAGGCGT+AGG | 0.612250 | 1_4:+16606281 | None:intergenic |
AATCTTCCAAATTTCTAGGG+TGG | 0.613402 | 1_4:+16596430 | None:intergenic |
CAATGCTTGATATATTGGAG+TGG | 0.614638 | 1_4:-16599182 | Msa0153340:CDS |
TAATTATTTATTTGCCGTCG+AGG | 0.615643 | 1_4:+16601462 | None:intergenic |
TGCACGCGCAGCATACTGCA+AGG | 0.616432 | 1_4:-16604408 | Msa0153340:CDS |
TATCGGAAGAGGATTGGAGG+AGG | 0.624019 | 1_4:-16605481 | Msa0153340:intron |
GGACATGCCTGAGAAGACGA+TGG | 0.627307 | 1_4:-16596636 | Msa0153340:CDS |
TTGCTTTCAACTAGAGCTGG+TGG | 0.629655 | 1_4:-16597012 | Msa0153340:CDS |
AGGTCGTTTAAGAACACGTG+AGG | 0.629827 | 1_4:+16606137 | None:intergenic |
ATAAATTCGCCTAATCAACA+AGG | 0.630699 | 1_4:+16601293 | None:intergenic |
AGGCAATCCTGACTTGGACA+AGG | 0.633867 | 1_4:+16604376 | None:intergenic |
TGATGTTGCTTGTGGTTCCG+AGG | 0.635138 | 1_4:-16605569 | Msa0153340:CDS |
ATGGTACCAATGATAGAAAG+GGG | 0.637574 | 1_4:-16599419 | Msa0153340:CDS |
CTTCCATCACTAAAGAAGAG+TGG | 0.641874 | 1_4:-16599237 | Msa0153340:CDS |
TATGGAAGAGATCAAAGAAG+GGG | 0.644140 | 1_4:-16596657 | Msa0153340:CDS |
AGAGAGGAAAGTGACAAGCG+CGG | 0.646654 | 1_4:+16606257 | None:intergenic |
ACCAACGCTTGATGCTGACA+GGG | 0.650956 | 1_4:-16604085 | Msa0153340:CDS |
TGTAGTAACAGCTACTGCCA+GGG | 0.653877 | 1_4:-16602038 | Msa0153340:CDS |
AAGCTTTGCAGAAGTGTGCG+AGG | 0.656865 | 1_4:-16605780 | Msa0153340:CDS |
GGTCGTTTAAGAACACGTGA+GGG | 0.657011 | 1_4:+16606138 | None:intergenic |
GGGAAAGGGAACTAAAGAAG+TGG | 0.662059 | 1_4:-16604466 | Msa0153340:CDS |
TAAATTCGCCTAATCAACAA+GGG | 0.662060 | 1_4:+16601294 | None:intergenic |
TGCAGGAGCTTTGTTCAAGG+AGG | 0.662835 | 1_4:+16596270 | None:intergenic |
TGCTTACAAGGAAGCCATCG+AGG | 0.663670 | 1_4:-16601559 | Msa0153340:CDS |
AGAGGAAAGTGACAAGCGCG+GGG | 0.665137 | 1_4:+16606259 | None:intergenic |
ACGAGAAGAACATTAAATGG+AGG | 0.665822 | 1_4:+16604353 | None:intergenic |
AACAGCACGATACTCCTCGA+TGG | 0.672839 | 1_4:+16601545 | None:intergenic |
ACTTGTTCGGAAAACACAGA+AGG | 0.673164 | 1_4:-16601744 | Msa0153340:intron |
TATTGAAGGACAGAAAAGGA+CGG | 0.676101 | 1_4:+16604440 | None:intergenic |
TGATACTGAATGTGATGCGG+CGG | 0.677790 | 1_4:-16605968 | Msa0153340:CDS |
GAAGTGTGCGAGGATTTCGG+TGG | 0.679153 | 1_4:-16605770 | Msa0153340:CDS |
CGACGGCGAAACCTGGACGG+AGG | 0.682610 | 1_4:-16605933 | Msa0153340:CDS |
GAAACGGTTACAGACGAAGG+AGG | 0.687098 | 1_4:+16606051 | None:intergenic |
CTATTTGACTCCCAGCACAC+AGG | 0.689141 | 1_4:-16597094 | Msa0153340:CDS |
TCGGAAACGGTTACAGACGA+AGG | 0.690300 | 1_4:+16606048 | None:intergenic |
GAGGATGAAGAGGATGCTGG+AGG | 0.696952 | 1_4:-16605895 | Msa0153340:CDS |
AAAGGCGTAGGCGTAGGCGT+AGG | 0.699900 | 1_4:+16606287 | None:intergenic |
AGTCAAATGCTACAGCAATG+AGG | 0.702286 | 1_4:+16597795 | None:intergenic |
TTATAATAGAAAGATTCGAG+AGG | 0.709391 | 1_4:+16606099 | None:intergenic |
GGATGATACTGAATGTGATG+CGG | 0.712985 | 1_4:-16605971 | Msa0153340:CDS |
CCAGCACACAGGTAGCAGAG+AGG | 0.713287 | 1_4:-16597083 | Msa0153340:CDS |
ATTGACTAAAGATCAAAACA+CGG | 0.772497 | 1_4:+16599211 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATACTATTATAAATATATG+AGG | - | chr1_4:16599769-16599788 | Msa0153340:intron | 10.0% |
!!! | ACAAGTAATTATTTTATTAT+TGG | + | chr1_4:16602524-16602543 | None:intergenic | 10.0% |
!! | ATTCTTAAATTTAAAAAAGT+TGG | + | chr1_4:16602876-16602895 | None:intergenic | 10.0% |
!! | GGAAAAAAAAAAAAAAAAAA+AGG | + | chr1_4:16603974-16603993 | None:intergenic | 10.0% |
!! | AATTATAAACTAAAGTTTAA+AGG | + | chr1_4:16605350-16605369 | None:intergenic | 10.0% |
!!! | TATTATGTTTTTAAGATTTC+TGG | - | chr1_4:16597573-16597592 | Msa0153340:intron | 15.0% |
!! | ATGAAGTGAAAATTAAATAT+AGG | - | chr1_4:16598990-16599009 | Msa0153340:intron | 15.0% |
!! | AAAATTAAATATAGGAATGA+AGG | - | chr1_4:16598998-16599017 | Msa0153340:intron | 15.0% |
!! | AAATTAAATATAGGAATGAA+GGG | - | chr1_4:16598999-16599018 | Msa0153340:intron | 15.0% |
!!! | ATTTTTTTAAGAAAAGATGT+AGG | - | chr1_4:16599615-16599634 | Msa0153340:intron | 15.0% |
!! | ATAATAACAAATAAAGAAAC+AGG | + | chr1_4:16600976-16600995 | None:intergenic | 15.0% |
!!! | TGTTATATACTATTGATTAA+AGG | - | chr1_4:16601004-16601023 | Msa0153340:intron | 15.0% |
!! | ATAGTATATCTTTATAGATT+GGG | + | chr1_4:16602361-16602380 | None:intergenic | 15.0% |
!! | TATAGTATATCTTTATAGAT+TGG | + | chr1_4:16602362-16602381 | None:intergenic | 15.0% |
!!! | CTATTAATATTTTATCATGT+AGG | + | chr1_4:16602492-16602511 | None:intergenic | 15.0% |
!!! | TAATAAATACAAGTTTTTAC+TGG | - | chr1_4:16603091-16603110 | Msa0153340:intron | 15.0% |
!! | TTCTTATACATGATTTAATT+TGG | + | chr1_4:16603626-16603645 | None:intergenic | 15.0% |
!!! | TGAATTTTTGTAATGTAAAT+AGG | - | chr1_4:16603731-16603750 | Msa0153340:intron | 15.0% |
!!! | AAATGTGTAAAATTGTTTTT+CGG | + | chr1_4:16605281-16605300 | None:intergenic | 15.0% |
!!! | TTTATAATTTTCTGTTTATG+TGG | - | chr1_4:16605361-16605380 | Msa0153340:intron | 15.0% |
!! | TCAATAATTTAACAAAATTG+CGG | + | chr1_4:16606041-16606060 | None:intergenic | 15.0% |
!!! | TTGTTTTTTGTTGCTTTTTT+TGG | - | chr1_4:16596998-16597017 | Msa0153340:CDS | 20.0% |
!! | TAGATAAATGAACAAAAAAC+AGG | + | chr1_4:16598006-16598025 | None:intergenic | 20.0% |
!!! | CACAAAATATCTATATGTTT+TGG | - | chr1_4:16598686-16598705 | Msa0153340:intron | 20.0% |
!!! | TTATACTTCCTTTTTATAGT+TGG | - | chr1_4:16598872-16598891 | Msa0153340:intron | 20.0% |
!!! | TTTTACAGATTAGTGATTAA+AGG | - | chr1_4:16599860-16599879 | Msa0153340:intron | 20.0% |
!! | ACAAAAACATACAAACTATA+TGG | + | chr1_4:16599939-16599958 | None:intergenic | 20.0% |
!!! | AAAATTAGCTTCAATTTTGT+TGG | - | chr1_4:16599994-16600013 | Msa0153340:intron | 20.0% |
!! | AAATAATGAAGAAATCTGTT+AGG | + | chr1_4:16600353-16600372 | None:intergenic | 20.0% |
!! | GAAAAATGATCAAACTTAAA+GGG | + | chr1_4:16601656-16601675 | None:intergenic | 20.0% |
!!! | TTTAAGTTTGATCATTTTTC+CGG | - | chr1_4:16601656-16601675 | Msa0153340:intron | 20.0% |
!! | TTGGGAAAAATAAAACTTAA+AGG | + | chr1_4:16601688-16601707 | None:intergenic | 20.0% |
!!! | AAGTTTTATTTTTCCCAATA+TGG | - | chr1_4:16601690-16601709 | Msa0153340:intron | 20.0% |
!! | AATTAGATGTTAACATTTCA+TGG | - | chr1_4:16601899-16601918 | Msa0153340:CDS | 20.0% |
!! | CATAATTTAACACAACTTAA+AGG | - | chr1_4:16601968-16601987 | Msa0153340:CDS | 20.0% |
!! | TAGATAGATAAATTAGTACT+TGG | - | chr1_4:16602683-16602702 | Msa0153340:intron | 20.0% |
!! | ATGCATAAATAATAAAAGAG+CGG | - | chr1_4:16602786-16602805 | Msa0153340:intron | 20.0% |
!!! | CTATAATTAATTTGACTTGA+TGG | - | chr1_4:16603116-16603135 | Msa0153340:intron | 20.0% |
!! | AAAAAAAAAACCAATGTCTT+TGG | - | chr1_4:16604054-16604073 | Msa0153340:intron | 20.0% |
!! | ATAGTTGAAACTATTTGAAA+AGG | + | chr1_4:16605400-16605419 | None:intergenic | 20.0% |
!! | TTAATATTAATGAGAGTGAA+GGG | + | chr1_4:16605799-16605818 | None:intergenic | 20.0% |
!! | TCTAAATGGATCATTAAAAT+CGG | + | chr1_4:16606148-16606167 | None:intergenic | 20.0% |
! | TTATAATAGAAAGATTCGAG+AGG | + | chr1_4:16596543-16596562 | None:intergenic | 25.0% |
! | CAATTCATCAAGGATATTAT+CGG | + | chr1_4:16596649-16596668 | None:intergenic | 25.0% |
!!! | TTTTTTGTTGCTTTTTTTGG+TGG | - | chr1_4:16597001-16597020 | Msa0153340:CDS | 25.0% |
!!! | ATTTTTTGCTGTTGTTGTAT+CGG | - | chr1_4:16597141-16597160 | Msa0153340:CDS | 25.0% |
!!! | AGGTAAATTTTTAGGGTTTT+TGG | - | chr1_4:16597178-16597197 | Msa0153340:intron | 25.0% |
! | GTGATTACATTCAATTATAC+TGG | + | chr1_4:16597416-16597435 | None:intergenic | 25.0% |
! | TCTTAAAAACATAATAGCAG+TGG | + | chr1_4:16597569-16597588 | None:intergenic | 25.0% |
!!! | TGTCTTGTGTTTTTGTTTTT+AGG | - | chr1_4:16598063-16598082 | Msa0153340:intron | 25.0% |
!!! | AAATATCTATATGTTTTGGC+TGG | - | chr1_4:16598690-16598709 | Msa0153340:intron | 25.0% |
!!! | AATATCTATATGTTTTGGCT+GGG | - | chr1_4:16598691-16598710 | Msa0153340:intron | 25.0% |
! | TTAAATCTCACATTTCATAG+TGG | - | chr1_4:16598808-16598827 | Msa0153340:intron | 25.0% |
! | AATATTAACCACTTGAGAAT+CGG | + | chr1_4:16598916-16598935 | None:intergenic | 25.0% |
! | TATGAATTTATGATAGCAAC+TGG | - | chr1_4:16598953-16598972 | Msa0153340:intron | 25.0% |
! | TAGCAACTGGAATTTAATAT+AGG | - | chr1_4:16598966-16598985 | Msa0153340:intron | 25.0% |
! | TTACTGTGTATAAGGAAATA+TGG | - | chr1_4:16599045-16599064 | Msa0153340:intron | 25.0% |
!!! | AGAATCATTTTGATCATTGT+GGG | + | chr1_4:16599146-16599165 | None:intergenic | 25.0% |
! | GTTGAGGTTAAAAATCATTT+AGG | - | chr1_4:16599467-16599486 | Msa0153340:intron | 25.0% |
! | GTTAGATTTAGATATGTCTT+AGG | - | chr1_4:16599657-16599676 | Msa0153340:intron | 25.0% |
!!! | TCAATTTTGTTGGTTTTTGA+TGG | - | chr1_4:16600004-16600023 | Msa0153340:intron | 25.0% |
!!! | TTTTGATGGATTAGTTAATG+TGG | - | chr1_4:16600018-16600037 | Msa0153340:intron | 25.0% |
! | GTGATAAAAGTAAGAGATAA+GGG | + | chr1_4:16600195-16600214 | None:intergenic | 25.0% |
! | TGTGATAAAAGTAAGAGATA+AGG | + | chr1_4:16600196-16600215 | None:intergenic | 25.0% |
! | AGGAACTGTATAGTATAATA+TGG | + | chr1_4:16600517-16600536 | None:intergenic | 25.0% |
!!! | TTTCCATACAGTTTTTCAAA+AGG | + | chr1_4:16600537-16600556 | None:intergenic | 25.0% |
!!! | TATTAGGGCCATTTATTTTA+CGG | - | chr1_4:16600846-16600865 | Msa0153340:intron | 25.0% |
! | TACTAACTCAATGAAACTAA+AGG | + | chr1_4:16600932-16600951 | None:intergenic | 25.0% |
! | TCCAAAAAGGAAAAATAACA+GGG | + | chr1_4:16601260-16601279 | None:intergenic | 25.0% |
! | ATCCAAAAAGGAAAAATAAC+AGG | + | chr1_4:16601261-16601280 | None:intergenic | 25.0% |
! | GGAAAAATGATCAAACTTAA+AGG | + | chr1_4:16601657-16601676 | None:intergenic | 25.0% |
! | TAAAACTTAAAGGACTAATC+CGG | + | chr1_4:16601678-16601697 | None:intergenic | 25.0% |
! | TCATGGTAGTAATACTAATA+TGG | - | chr1_4:16601916-16601935 | Msa0153340:CDS | 25.0% |
! | CATGGTAGTAATACTAATAT+GGG | - | chr1_4:16601917-16601936 | Msa0153340:CDS | 25.0% |
! | GTAATACTAATATGGGAAAA+TGG | - | chr1_4:16601924-16601943 | Msa0153340:CDS | 25.0% |
! | TGTAACATAAATGACCAATT+AGG | - | chr1_4:16602009-16602028 | Msa0153340:CDS | 25.0% |
! | GTAACATAAATGACCAATTA+GGG | - | chr1_4:16602010-16602029 | Msa0153340:CDS | 25.0% |
!!! | TTAGGTTTTTTTTCCCTAAT+TGG | + | chr1_4:16602026-16602045 | None:intergenic | 25.0% |
! | ATTAGGGAAAAAAAACCTAA+AGG | - | chr1_4:16602026-16602045 | Msa0153340:CDS | 25.0% |
! | TCAATAGTATAATACACTTG+AGG | + | chr1_4:16602904-16602923 | None:intergenic | 25.0% |
!! | TTGCAGCTTTTACTAAATTA+TGG | - | chr1_4:16603201-16603220 | Msa0153340:intron | 25.0% |
! | ATTGACTAAAGATCAAAACA+CGG | + | chr1_4:16603431-16603450 | None:intergenic | 25.0% |
! | TTTCAGAATCAAATGATGTA+TGG | - | chr1_4:16603551-16603570 | Msa0153340:intron | 25.0% |
! | ATCAAATGATGTATGGTTTA+TGG | - | chr1_4:16603558-16603577 | Msa0153340:intron | 25.0% |
! | ATGTAAATAGGTGATCTTTA+AGG | - | chr1_4:16603743-16603762 | Msa0153340:intron | 25.0% |
! | AAAAATCTGCCATACAAATA+TGG | + | chr1_4:16603884-16603903 | None:intergenic | 25.0% |
!! | ATATTTGTATGGCAGATTTT+TGG | - | chr1_4:16603883-16603902 | Msa0153340:intron | 25.0% |
! | AGAAATAAAGTACAAGCAAA+TGG | + | chr1_4:16604001-16604020 | None:intergenic | 25.0% |
! | TCCAACTTTCTCTTATATTT+AGG | - | chr1_4:16604113-16604132 | Msa0153340:CDS | 25.0% |
! | TCCTAAATATAAGAGAAAGT+TGG | + | chr1_4:16604117-16604136 | None:intergenic | 25.0% |
!!! | TCTCATTGTTACTTTTACTT+GGG | + | chr1_4:16604174-16604193 | None:intergenic | 25.0% |
!!! | TTCTCATTGTTACTTTTACT+TGG | + | chr1_4:16604175-16604194 | None:intergenic | 25.0% |
! | AAAAAGAAACAAGATTGATG+TGG | - | chr1_4:16604205-16604224 | Msa0153340:CDS | 25.0% |
!!! | TCTGTTTGGTTTTCATATTT+GGG | - | chr1_4:16604412-16604431 | Msa0153340:CDS | 25.0% |
!! | ACTATACAAGTTTAGAACTT+AGG | - | chr1_4:16604631-16604650 | Msa0153340:intron | 25.0% |
! | ACAATAATCATGGTAATTGT+AGG | + | chr1_4:16604783-16604802 | None:intergenic | 25.0% |
! | TAATCAGTGTTGTCAAATTT+CGG | - | chr1_4:16605019-16605038 | Msa0153340:intron | 25.0% |
! | TGTTAGTAATTTGAATCTTG+TGG | - | chr1_4:16605121-16605140 | Msa0153340:intron | 25.0% |
!! | TGTGAAACTATTTTATGATG+TGG | - | chr1_4:16605198-16605217 | Msa0153340:intron | 25.0% |
!!! | CATTTGTTTTTACGATAAGA+AGG | - | chr1_4:16605296-16605315 | Msa0153340:intron | 25.0% |
! | AATTAGCAAATACCTGTATA+TGG | + | chr1_4:16605772-16605791 | None:intergenic | 25.0% |
! | CTTAATATTAATGAGAGTGA+AGG | + | chr1_4:16605800-16605819 | None:intergenic | 25.0% |
!! | TAAATTATTGATTGAGCCAA+TGG | - | chr1_4:16606050-16606069 | Msa0153340:CDS | 25.0% |
! | CTAAATGGATCATTAAAATC+GGG | + | chr1_4:16606147-16606166 | None:intergenic | 25.0% |
! | AATGATCCATTTAGACAAAT+TGG | - | chr1_4:16606153-16606172 | Msa0153340:CDS | 25.0% |
! | ATGACATGAATAATCTCTAT+AGG | - | chr1_4:16606269-16606288 | Msa0153340:five_prime_UTR | 25.0% |
TTTCAACTTCTCCAATTTCT+AGG | - | chr1_4:16596408-16596427 | Msa0153340:three_prime_UTR | 30.0% | |
TTCAACTTCTCCAATTTCTA+GGG | - | chr1_4:16596409-16596428 | Msa0153340:three_prime_UTR | 30.0% | |
CGATAATATCCTTGATGAAT+TGG | - | chr1_4:16596647-16596666 | Msa0153340:CDS | 30.0% | |
GAGGTTTATTATAGATGATG+AGG | - | chr1_4:16596725-16596744 | Msa0153340:CDS | 30.0% | |
TTCAACTGAAGATGAAATTG+AGG | - | chr1_4:16596797-16596816 | Msa0153340:intron | 30.0% | |
TAGAATTGTTACTCAGGTAA+TGG | - | chr1_4:16596965-16596984 | Msa0153340:CDS | 30.0% | |
!! | TTTTTGGTGGTTTTCAGTTA+TGG | - | chr1_4:16597014-16597033 | Msa0153340:CDS | 30.0% |
!! | AGTTATGGAGTTTGATTTGA+GGG | - | chr1_4:16597029-16597048 | Msa0153340:CDS | 30.0% |
! | ATTGGAGGAGGTAAATTTTT+AGG | - | chr1_4:16597170-16597189 | Msa0153340:CDS | 30.0% |
! | TTGGAGGAGGTAAATTTTTA+GGG | - | chr1_4:16597171-16597190 | Msa0153340:CDS | 30.0% |
! | TGTGACTATTTTATGTGATG+TGG | - | chr1_4:16597296-16597315 | Msa0153340:intron | 30.0% |
!! | AAGATTTCTGGTTATCACTA+TGG | - | chr1_4:16597585-16597604 | Msa0153340:intron | 30.0% |
AATCCATAATGAAATCACAG+TGG | + | chr1_4:16597706-16597725 | None:intergenic | 30.0% | |
CATTATGGATTTCTCAATCT+TGG | - | chr1_4:16597715-16597734 | Msa0153340:intron | 30.0% | |
!! | GCTTTCAAGTTTGTGTTTAT+TGG | - | chr1_4:16597792-16597811 | Msa0153340:CDS | 30.0% |
!!! | GTGATTTTTTTGAAGCTTTG+TGG | - | chr1_4:16597841-16597860 | Msa0153340:intron | 30.0% |
!!! | AAGCTTTGTGGTTTTGATTA+TGG | - | chr1_4:16597853-16597872 | Msa0153340:intron | 30.0% |
! | TTTTCTGTCCTTCAATATCA+CGG | - | chr1_4:16598205-16598224 | Msa0153340:intron | 30.0% |
! | TAAGTAGCACAAAAGTATAG+AGG | + | chr1_4:16598348-16598367 | None:intergenic | 30.0% |
! | ACTTATATGACGCTTTTCAT+AGG | - | chr1_4:16598363-16598382 | Msa0153340:intron | 30.0% |
TGAAGGACAAAAATAGCTTT+AGG | - | chr1_4:16598497-16598516 | Msa0153340:intron | 30.0% | |
!! | ACATGTAGATCATTTTGAAG+AGG | + | chr1_4:16598583-16598602 | None:intergenic | 30.0% |
ATGTATAACTTAGTGTTGTG+TGG | - | chr1_4:16598603-16598622 | Msa0153340:intron | 30.0% | |
TTCCTTATACACAGTAATGA+TGG | + | chr1_4:16599042-16599061 | None:intergenic | 30.0% | |
!! | GAATCATTTTGATCATTGTG+GGG | + | chr1_4:16599145-16599164 | None:intergenic | 30.0% |
!! | GAGAATCATTTTGATCATTG+TGG | + | chr1_4:16599147-16599166 | None:intergenic | 30.0% |
CAAACCAAACGTAATGTAAT+GGG | + | chr1_4:16599415-16599434 | None:intergenic | 30.0% | |
TCAAACCAAACGTAATGTAA+TGG | + | chr1_4:16599416-16599435 | None:intergenic | 30.0% | |
AATCATTTAGGAAGAAGAGA+TGG | - | chr1_4:16599479-16599498 | Msa0153340:intron | 30.0% | |
TTCTGTGTAAATTGTGTCTT+GGG | + | chr1_4:16599804-16599823 | None:intergenic | 30.0% | |
TAGTTGAGAAGTTTCTTGAA+AGG | - | chr1_4:16599893-16599912 | Msa0153340:intron | 30.0% | |
AAAAGAATTCTACAGTAGCA+GGG | + | chr1_4:16600264-16600283 | None:intergenic | 30.0% | |
TAAAAGAATTCTACAGTAGC+AGG | + | chr1_4:16600265-16600284 | None:intergenic | 30.0% | |
AAGGCTAAATGGAATATTCA+TGG | + | chr1_4:16600291-16600310 | None:intergenic | 30.0% | |
TTTCATATGATCAAAACCTC+CGG | - | chr1_4:16600483-16600502 | Msa0153340:intron | 30.0% | |
GTATAATATGGATGAAACAC+CGG | + | chr1_4:16600505-16600524 | None:intergenic | 30.0% | |
!! | GTTCCTTTTGAAAAACTGTA+TGG | - | chr1_4:16600531-16600550 | Msa0153340:intron | 30.0% |
!!! | ACAACTTGCTAGAAACATTT+TGG | - | chr1_4:16600560-16600579 | Msa0153340:intron | 30.0% |
!! | ACATTTTGGAAGTTTGTGAT+AGG | - | chr1_4:16600574-16600593 | Msa0153340:intron | 30.0% |
!!! | TTTTTTCCTTTTGTTTTCCC+TGG | + | chr1_4:16600621-16600640 | None:intergenic | 30.0% |
CCTGTAACAAATTCATTACA+AGG | + | chr1_4:16600712-16600731 | None:intergenic | 30.0% | |
!! | CCTTGTAATGAATTTGTTAC+AGG | - | chr1_4:16600709-16600728 | Msa0153340:intron | 30.0% |
!! | TGAATTTGTTACAGGAGTTA+TGG | - | chr1_4:16600717-16600736 | Msa0153340:intron | 30.0% |
TCTTCAGAAGCAAAAATATC+AGG | + | chr1_4:16600764-16600783 | None:intergenic | 30.0% | |
AGTCGTATGAAGTCTATATT+AGG | - | chr1_4:16600830-16600849 | Msa0153340:intron | 30.0% | |
GTCGTATGAAGTCTATATTA+GGG | - | chr1_4:16600831-16600850 | Msa0153340:intron | 30.0% | |
TAATTATTTATTTGCCGTCG+AGG | + | chr1_4:16601180-16601199 | None:intergenic | 30.0% | |
!!! | ACCCTGTTATTTTTCCTTTT+TGG | - | chr1_4:16601256-16601275 | Msa0153340:CDS | 30.0% |
TAAATTCGCCTAATCAACAA+GGG | + | chr1_4:16601348-16601367 | None:intergenic | 30.0% | |
ATAAATTCGCCTAATCAACA+AGG | + | chr1_4:16601349-16601368 | None:intergenic | 30.0% | |
TAGGCGAATTTATAATGATG+AGG | - | chr1_4:16601356-16601375 | Msa0153340:intron | 30.0% | |
!!! | TTTTGGCTTTGAATGTACTT+TGG | - | chr1_4:16601419-16601438 | Msa0153340:intron | 30.0% |
TGAACATACTGTTGAAAGAT+GGG | + | chr1_4:16601534-16601553 | None:intergenic | 30.0% | |
TTGAACATACTGTTGAAAGA+TGG | + | chr1_4:16601535-16601554 | None:intergenic | 30.0% | |
TAAAATTGTCTGTTGCAATG+AGG | - | chr1_4:16601586-16601605 | Msa0153340:CDS | 30.0% | |
GTAAGATAAAGGACCATATT+GGG | + | chr1_4:16601706-16601725 | None:intergenic | 30.0% | |
TGTAAGATAAAGGACCATAT+TGG | + | chr1_4:16601707-16601726 | None:intergenic | 30.0% | |
GCAAACAGATTGTAAGATAA+AGG | + | chr1_4:16601717-16601736 | None:intergenic | 30.0% | |
TCAACAACAATTAGTGAAAC+CGG | - | chr1_4:16601760-16601779 | Msa0153340:CDS | 30.0% | |
ATTTATTGCAGTAGTAGACA+GGG | + | chr1_4:16601806-16601825 | None:intergenic | 30.0% | |
AATTTATTGCAGTAGTAGAC+AGG | + | chr1_4:16601807-16601826 | None:intergenic | 30.0% | |
!! | AAGTCCTTTAAGTGGATTAT+GGG | + | chr1_4:16601834-16601853 | None:intergenic | 30.0% |
! | TTTTACCTTGTATTTGCAAG+AGG | - | chr1_4:16602207-16602226 | Msa0153340:intron | 30.0% |
! | ATTTACTGTGTAGTCGATTT+AGG | - | chr1_4:16602936-16602955 | Msa0153340:intron | 30.0% |
AGGAATAGATGAATACTGAT+GGG | + | chr1_4:16602977-16602996 | None:intergenic | 30.0% | |
! | ATTTTCTGTTAGTTATCCCT+AGG | - | chr1_4:16603020-16603039 | Msa0153340:intron | 30.0% |
!! | CTTGATGGTAATTGTTGTTT+CGG | - | chr1_4:16603131-16603150 | Msa0153340:intron | 30.0% |
!!! | ATTTGAAGCCGCAATTTTTT+TGG | - | chr1_4:16603177-16603196 | Msa0153340:intron | 30.0% |
TTATGGTACCAATGATAGAA+AGG | - | chr1_4:16603218-16603237 | Msa0153340:intron | 30.0% | |
TATGGTACCAATGATAGAAA+GGG | - | chr1_4:16603219-16603238 | Msa0153340:intron | 30.0% | |
GCATAACATGTTTATCTGAT+AGG | + | chr1_4:16603248-16603267 | None:intergenic | 30.0% | |
TTATGCTTTCTGCAAAATGT+CGG | - | chr1_4:16603262-16603281 | Msa0153340:intron | 30.0% | |
! | ATTGTCAGCTATACTGTTTT+TGG | - | chr1_4:16603314-16603333 | Msa0153340:intron | 30.0% |
!!! | GTGTTTTGATCTTTAGTCAA+TGG | - | chr1_4:16603430-16603449 | Msa0153340:intron | 30.0% |
GACATCAATGCTTGATATAT+TGG | - | chr1_4:16603452-16603471 | Msa0153340:intron | 30.0% | |
AATGCTTGATATATTGGAGT+GGG | - | chr1_4:16603458-16603477 | Msa0153340:intron | 30.0% | |
!! | GTTGGTAAAATCTGTTTTGA+AGG | - | chr1_4:16603703-16603722 | Msa0153340:intron | 30.0% |
!!! | GTAAAATCTGTTTTGAAGGT+TGG | - | chr1_4:16603707-16603726 | Msa0153340:intron | 30.0% |
GATGATGTGGTTTATTTCAT+TGG | - | chr1_4:16603832-16603851 | Msa0153340:intron | 30.0% | |
GTGTTAATAAGTGTTATCGA+TGG | + | chr1_4:16603924-16603943 | None:intergenic | 30.0% | |
AAAAAAAAAAAAGGAGAGCC+AGG | + | chr1_4:16603965-16603984 | None:intergenic | 30.0% | |
TAAAGTACAAGCAAATGGAA+GGG | + | chr1_4:16603996-16604015 | None:intergenic | 30.0% | |
ATAAAGTACAAGCAAATGGA+AGG | + | chr1_4:16603997-16604016 | None:intergenic | 30.0% | |
! | TTGTACTTTATTTCTCCATC+CGG | - | chr1_4:16604006-16604025 | Msa0153340:intron | 30.0% |
CTCAACTTTCTCGTATAATT+CGG | + | chr1_4:16604033-16604052 | None:intergenic | 30.0% | |
! | AAATTTTCGACCAAAGACAT+TGG | + | chr1_4:16604067-16604086 | None:intergenic | 30.0% |
! | CTTTCTCTTATATTTAGGAC+CGG | - | chr1_4:16604118-16604137 | Msa0153340:CDS | 30.0% |
! | TTTCTCTTATATTTAGGACC+GGG | - | chr1_4:16604119-16604138 | Msa0153340:CDS | 30.0% |
GAGTACATTATTATGCATTG+AGG | - | chr1_4:16604144-16604163 | Msa0153340:CDS | 30.0% | |
TACATTATTATGCATTGAGG+AGG | - | chr1_4:16604147-16604166 | Msa0153340:CDS | 30.0% | |
! | AGGATAACATACAGTTTTCA+TGG | + | chr1_4:16604285-16604304 | None:intergenic | 30.0% |
AAAAATCGCATTCCTTCAAA+TGG | + | chr1_4:16604357-16604376 | None:intergenic | 30.0% | |
! | TTTGAAGGAATGCGATTTTT+AGG | - | chr1_4:16604357-16604376 | Msa0153340:CDS | 30.0% |
AAAACCAAACAGAGTATGAA+AGG | + | chr1_4:16604405-16604424 | None:intergenic | 30.0% | |
!!! | CTCTGTTTGGTTTTCATATT+TGG | - | chr1_4:16604411-16604430 | Msa0153340:CDS | 30.0% |
!!! | TTTGGTTTTCATATTTGGGA+TGG | - | chr1_4:16604416-16604435 | Msa0153340:CDS | 30.0% |
!! | TTGGTTTTCATATTTGGGAT+GGG | - | chr1_4:16604417-16604436 | Msa0153340:CDS | 30.0% |
! | ATCGTAAGTTTTCATCCTAT+GGG | + | chr1_4:16605083-16605102 | None:intergenic | 30.0% |
! | TATCGTAAGTTTTCATCCTA+TGG | + | chr1_4:16605084-16605103 | None:intergenic | 30.0% |
ATTACTAACAGTGCTATCAA+TGG | + | chr1_4:16605111-16605130 | None:intergenic | 30.0% | |
ATAACAAGGTCAATATCGAT+AGG | + | chr1_4:16605158-16605177 | None:intergenic | 30.0% | |
! | TACGATAAGAAGGTTTTTCT+TGG | - | chr1_4:16605306-16605325 | Msa0153340:intron | 30.0% |
! | TTTTATACTAGAGTCTAGCA+TGG | - | chr1_4:16605419-16605438 | Msa0153340:intron | 30.0% |
TTGGAGAACAATACTTGAAA+TGG | + | chr1_4:16605503-16605522 | None:intergenic | 30.0% | |
GAGTCAAATAGTAAAGAGTA+AGG | + | chr1_4:16605536-16605555 | None:intergenic | 30.0% | |
AAATACCTGTATATGGTTAC+AGG | + | chr1_4:16605765-16605784 | None:intergenic | 30.0% | |
TTAAGAAAAGAACTTAGCCT+TGG | - | chr1_4:16605815-16605834 | Msa0153340:CDS | 30.0% | |
! | AATCCACCAAAGCATTAAAA+GGG | + | chr1_4:16605850-16605869 | None:intergenic | 30.0% |
AAGACTAGTGTACATCAATT+TGG | + | chr1_4:16606236-16606255 | None:intergenic | 30.0% | |
CTATAGGTAGATAGTTCAAT+AGG | - | chr1_4:16606285-16606304 | Msa0153340:five_prime_UTR | 30.0% | |
TAATAGAAAGATTCGAGAGG+CGG | + | chr1_4:16596540-16596559 | None:intergenic | 35.0% | |
CAGTATCATCCAATTCATCA+AGG | + | chr1_4:16596659-16596678 | None:intergenic | 35.0% | |
TATAGATGATGAGGATGAAG+AGG | - | chr1_4:16596734-16596753 | Msa0153340:CDS | 35.0% | |
AGACGCAAATGAAGATGATT+TGG | - | chr1_4:16596830-16596849 | Msa0153340:intron | 35.0% | |
!! | GCAAATGAAGATGATTTGGT+TGG | - | chr1_4:16596834-16596853 | Msa0153340:intron | 35.0% |
TTCGGAAGTTGAATCTTCTT+CGG | - | chr1_4:16596941-16596960 | Msa0153340:CDS | 35.0% | |
TTCGGTTAGAATTGTTACTC+AGG | - | chr1_4:16596959-16596978 | Msa0153340:CDS | 35.0% | |
! | TGTTACTCAGGTAATGGTTA+TGG | - | chr1_4:16596971-16596990 | Msa0153340:CDS | 35.0% |
!! | CAGTTATGGAGTTTGATTTG+AGG | - | chr1_4:16597028-16597047 | Msa0153340:CDS | 35.0% |
!! | GTTATGGAGTTTGATTTGAG+GGG | - | chr1_4:16597030-16597049 | Msa0153340:CDS | 35.0% |
!! | TTGATTTGAGGGGTTTTTGT+AGG | - | chr1_4:16597040-16597059 | Msa0153340:CDS | 35.0% |
!!! | TAGGGTTTTTGGTTACATTG+TGG | - | chr1_4:16597189-16597208 | Msa0153340:intron | 35.0% |
TGTGGTGAATTTGAATTTCG+TGG | - | chr1_4:16597207-16597226 | Msa0153340:intron | 35.0% | |
TGTTCCAACAAACACAAACT+CGG | + | chr1_4:16597533-16597552 | None:intergenic | 35.0% | |
TATCACTATGGTACACTGTT+TGG | - | chr1_4:16597597-16597616 | Msa0153340:intron | 35.0% | |
ATCACTATGGTACACTGTTT+GGG | - | chr1_4:16597598-16597617 | Msa0153340:intron | 35.0% | |
CATCATTGGATTCATTGTTG+TGG | - | chr1_4:16597743-16597762 | Msa0153340:intron | 35.0% | |
TTGTGCTTTACTGTTTAGCA+TGG | - | chr1_4:16597884-16597903 | Msa0153340:intron | 35.0% | |
!!! | TGCTTCTGTTTTGGAAAACT+GGG | - | chr1_4:16598153-16598172 | Msa0153340:intron | 35.0% |
!!! | TGTTTTGGAAAACTGGGAAA+GGG | - | chr1_4:16598159-16598178 | Msa0153340:intron | 35.0% |
TATTGAAGGACAGAAAAGGA+CGG | + | chr1_4:16598202-16598221 | None:intergenic | 35.0% | |
GTGATATTGAAGGACAGAAA+AGG | + | chr1_4:16598206-16598225 | None:intergenic | 35.0% | |
TTTCTGTCCTTCAATATCAC+GGG | - | chr1_4:16598206-16598225 | Msa0153340:intron | 35.0% | |
AGAAGAACATTAAATGGAGG+AGG | + | chr1_4:16598286-16598305 | None:intergenic | 35.0% | |
ACGAGAAGAACATTAAATGG+AGG | + | chr1_4:16598289-16598308 | None:intergenic | 35.0% | |
CAGACGAGAAGAACATTAAA+TGG | + | chr1_4:16598292-16598311 | None:intergenic | 35.0% | |
!! | AGGACAAAAATAGCTTTAGG+TGG | - | chr1_4:16598500-16598519 | Msa0153340:intron | 35.0% |
CAAGTTACTGAACAAATCAC+TGG | - | chr1_4:16598648-16598667 | Msa0153340:intron | 35.0% | |
TTAAGACTTAGCAGAGTAGA+AGG | + | chr1_4:16598792-16598811 | None:intergenic | 35.0% | |
GGATACGTCCAACTATAAAA+AGG | + | chr1_4:16598883-16598902 | None:intergenic | 35.0% | |
TTGAGAATCGGAATGAAACA+TGG | + | chr1_4:16598904-16598923 | None:intergenic | 35.0% | |
AGGAATGAAGGGAAAATTCA+AGG | - | chr1_4:16599010-16599029 | Msa0153340:intron | 35.0% | |
AGCCATCATTACTGTGTATA+AGG | - | chr1_4:16599037-16599056 | Msa0153340:intron | 35.0% | |
GGAAATATGGAAACAGAAAG+TGG | - | chr1_4:16599058-16599077 | Msa0153340:intron | 35.0% | |
TGAAGCAAAATTCCTCTAAG+AGG | - | chr1_4:16599091-16599110 | Msa0153340:intron | 35.0% | |
TTGTTGGGAATCAGCAAAAT+AGG | - | chr1_4:16599259-16599278 | Msa0153340:intron | 35.0% | |
GAAATCTGTTAGTTGTGGAA+AGG | + | chr1_4:16599287-16599306 | None:intergenic | 35.0% | |
AAAGGAAATGTGTATGTGGT+GGG | + | chr1_4:16599332-16599351 | None:intergenic | 35.0% | |
TAGGAAAGGAAATGTGTATG+TGG | + | chr1_4:16599336-16599355 | None:intergenic | 35.0% | |
! | AAAAAGAGCATGTGTAGGAA+AGG | + | chr1_4:16599350-16599369 | None:intergenic | 35.0% |
! | TGAAGAAAAAGAGCATGTGT+AGG | + | chr1_4:16599355-16599374 | None:intergenic | 35.0% |
!! | TTACGTTTGGTTTGAAGCAA+TGG | - | chr1_4:16599421-16599440 | Msa0153340:CDS | 35.0% |
!! | TACGTTTGGTTTGAAGCAAT+GGG | - | chr1_4:16599422-16599441 | Msa0153340:CDS | 35.0% |
!! | TGATTTTGAGAGAAGTGAGT+AGG | - | chr1_4:16599526-16599545 | Msa0153340:intron | 35.0% |
!!! | GAAGTGAGTAGGATTTTTTC+AGG | - | chr1_4:16599537-16599556 | Msa0153340:intron | 35.0% |
!!! | GTAGGATTTTTTCAGGTTTG+AGG | - | chr1_4:16599544-16599563 | Msa0153340:intron | 35.0% |
GTAGGTTTATTGCTTAAGAG+AGG | - | chr1_4:16599633-16599652 | Msa0153340:intron | 35.0% | |
TCTAGAGACTTGTGTAATCT+AGG | + | chr1_4:16599692-16599711 | None:intergenic | 35.0% | |
GTTCTGTGTAAATTGTGTCT+TGG | + | chr1_4:16599805-16599824 | None:intergenic | 35.0% | |
!! | AAGGAGTGGATTTTGTTACA+AGG | - | chr1_4:16599912-16599931 | Msa0153340:intron | 35.0% |
!! | ATGTGGTTCTGAATTCTGAT+AGG | - | chr1_4:16600035-16600054 | Msa0153340:intron | 35.0% |
AATCTGTCATCTCTATCTGT+TGG | - | chr1_4:16600647-16600666 | Msa0153340:intron | 35.0% | |
TTCATTACAAGGCTTACTTC+AGG | + | chr1_4:16600701-16600720 | None:intergenic | 35.0% | |
!! | TTATTTTGTTCAGTTCCGCA+AGG | - | chr1_4:16601197-16601216 | Msa0153340:CDS | 35.0% |
GAAGCTGTGTTAATCCAAAA+AGG | + | chr1_4:16601273-16601292 | None:intergenic | 35.0% | |
TACTTTGGACAGAGTTATAG+AGG | - | chr1_4:16601434-16601453 | Msa0153340:intron | 35.0% | |
TTTCAGAGTAGAAGATTACC+CGG | + | chr1_4:16601491-16601510 | None:intergenic | 35.0% | |
GAACATACTGTTGAAAGATG+GGG | + | chr1_4:16601533-16601552 | None:intergenic | 35.0% | |
!! | AGTCCTTTAAGTGGATTATG+GGG | + | chr1_4:16601833-16601852 | None:intergenic | 35.0% |
!! | CAAGTCCTTTAAGTGGATTA+TGG | + | chr1_4:16601835-16601854 | None:intergenic | 35.0% |
CATAATCCACTTAAAGGACT+TGG | - | chr1_4:16601833-16601852 | Msa0153340:CDS | 35.0% | |
ACAATTCCAAGTCCTTTAAG+TGG | + | chr1_4:16601842-16601861 | None:intergenic | 35.0% | |
! | TTTAAGTTTGACCAGTTTCC+TGG | + | chr1_4:16602058-16602077 | None:intergenic | 35.0% |
AGGAAACTGGTCAAACTTAA+AGG | - | chr1_4:16602057-16602076 | Msa0153340:intron | 35.0% | |
! | TAACGAATCCAACTCTTTTC+TGG | + | chr1_4:16602169-16602188 | None:intergenic | 35.0% |
TGAATCCTCTTGCAAATACA+AGG | + | chr1_4:16602215-16602234 | None:intergenic | 35.0% | |
! | ATTGTTGTTGTTGTTGAAGG+TGG | + | chr1_4:16602256-16602275 | None:intergenic | 35.0% |
ACCTTCAACAACAACAACAA+TGG | - | chr1_4:16602255-16602274 | Msa0153340:intron | 35.0% | |
CCTTCAACAACAACAACAAT+GGG | - | chr1_4:16602256-16602275 | Msa0153340:intron | 35.0% | |
CTTCAACAACAACAACAATG+GGG | - | chr1_4:16602257-16602276 | Msa0153340:intron | 35.0% | |
TTCAACAACAACAACAATGG+GGG | - | chr1_4:16602258-16602277 | Msa0153340:intron | 35.0% | |
TTGAAGGAGAAGATGAAGTT+TGG | - | chr1_4:16602325-16602344 | Msa0153340:intron | 35.0% | |
TGAAGGAGAAGATGAAGTTT+GGG | - | chr1_4:16602326-16602345 | Msa0153340:intron | 35.0% | |
CTTTATAGATTGGGCCTTAA+TGG | + | chr1_4:16602352-16602371 | None:intergenic | 35.0% | |
!! | TGTAGTCGATTTAGGTTTTC+TGG | - | chr1_4:16602944-16602963 | Msa0153340:intron | 35.0% |
ATAGATGAATACTGATGGGA+TGG | + | chr1_4:16602973-16602992 | None:intergenic | 35.0% | |
GAGGAATAGATGAATACTGA+TGG | + | chr1_4:16602978-16602997 | None:intergenic | 35.0% | |
GCTGCAAACCAAAAAAATTG+CGG | + | chr1_4:16603188-16603207 | None:intergenic | 35.0% | |
ATGGTACCAATGATAGAAAG+GGG | - | chr1_4:16603220-16603239 | Msa0153340:intron | 35.0% | |
TATGCTTTCTGCAAAATGTC+GGG | - | chr1_4:16603263-16603282 | Msa0153340:intron | 35.0% | |
!! | TTTTTGGCATGATTGTTTGC+TGG | - | chr1_4:16603330-16603349 | Msa0153340:intron | 35.0% |
! | TTTTGGCATGATTGTTTGCT+GGG | - | chr1_4:16603331-16603350 | Msa0153340:intron | 35.0% |
CAATGCTTGATATATTGGAG+TGG | - | chr1_4:16603457-16603476 | Msa0153340:intron | 35.0% | |
GTTTATGGCACATATTATGC+AGG | - | chr1_4:16603573-16603592 | Msa0153340:intron | 35.0% | |
ATATTGTCAGCGACTAAACT+TGG | - | chr1_4:16603599-16603618 | Msa0153340:intron | 35.0% | |
AAAGTACAAGCAAATGGAAG+GGG | + | chr1_4:16603995-16604014 | None:intergenic | 35.0% | |
! | TTCTCTTATATTTAGGACCG+GGG | - | chr1_4:16604120-16604139 | Msa0153340:CDS | 35.0% |
CCTTAAAGTTGTACAGTGAA+AGG | + | chr1_4:16604305-16604324 | None:intergenic | 35.0% | |
CCTTTCACTGTACAACTTTA+AGG | - | chr1_4:16604302-16604321 | Msa0153340:intron | 35.0% | |
GAAACCTTTCATACTCTGTT+TGG | - | chr1_4:16604398-16604417 | Msa0153340:CDS | 35.0% | |
TCTTGTGATCATGCATTCTT+GGG | + | chr1_4:16604457-16604476 | None:intergenic | 35.0% | |
TCAGACTCATGATTCTATGA+GGG | + | chr1_4:16604711-16604730 | None:intergenic | 35.0% | |
TGAGTCTGAGGACTATTAAT+CGG | - | chr1_4:16604722-16604741 | Msa0153340:intron | 35.0% | |
TAATCGGGTCTACAACATAA+TGG | - | chr1_4:16604738-16604757 | Msa0153340:intron | 35.0% | |
TGGTAATTGTAGGCATATCT+AGG | + | chr1_4:16604773-16604792 | None:intergenic | 35.0% | |
TTAAGCGGTGACAATAATCA+TGG | + | chr1_4:16604793-16604812 | None:intergenic | 35.0% | |
! | TCTTCATGTTTTCAGCTTTG+CGG | + | chr1_4:16604896-16604915 | None:intergenic | 35.0% |
CTGAAAGTGAAGGATGATAT+GGG | + | chr1_4:16604999-16605018 | None:intergenic | 35.0% | |
ACTGAAAGTGAAGGATGATA+TGG | + | chr1_4:16605000-16605019 | None:intergenic | 35.0% | |
! | ACACTGATTACTGAAAGTGA+AGG | + | chr1_4:16605009-16605028 | None:intergenic | 35.0% |
!!! | TTTTTTAGTAGCTGTCCCAT+AGG | - | chr1_4:16605065-16605084 | Msa0153340:CDS | 35.0% |
CACACAAGAATAGCATAACA+AGG | + | chr1_4:16605172-16605191 | None:intergenic | 35.0% | |
!! | AAGAACTTAGCCTTGGAATT+TGG | - | chr1_4:16605822-16605841 | Msa0153340:CDS | 35.0% |
TAAAAGGGAACCAAATTCCA+AGG | + | chr1_4:16605835-16605854 | None:intergenic | 35.0% | |
! | TTGGTTCCCTTTTAATGCTT+TGG | - | chr1_4:16605841-16605860 | Msa0153340:CDS | 35.0% |
! | CAATCCACCAAAGCATTAAA+AGG | + | chr1_4:16605851-16605870 | None:intergenic | 35.0% |
TTATGATCATATTCCACTGC+AGG | - | chr1_4:16605876-16605895 | Msa0153340:CDS | 35.0% | |
TCTATGGAAGAGATCAAAGA+AGG | - | chr1_4:16605980-16605999 | Msa0153340:CDS | 35.0% | |
CTATGGAAGAGATCAAAGAA+GGG | - | chr1_4:16605981-16606000 | Msa0153340:CDS | 35.0% | |
TATGGAAGAGATCAAAGAAG+GGG | - | chr1_4:16605982-16606001 | Msa0153340:CDS | 35.0% | |
ATAAACCTAAGCGTTTCCAT+TGG | + | chr1_4:16606069-16606088 | None:intergenic | 35.0% | |
! | AAGAAAGAAGTGCAAACCTA+GGG | + | chr1_4:16606120-16606139 | None:intergenic | 35.0% |
! | AAAGAAAGAAGTGCAAACCT+AGG | + | chr1_4:16606121-16606140 | None:intergenic | 35.0% |
!! | GTCTTTAGTACCGATTTCAA+GGG | + | chr1_4:16606182-16606201 | None:intergenic | 35.0% |
!! | TGTCTTTAGTACCGATTTCA+AGG | + | chr1_4:16606183-16606202 | None:intergenic | 35.0% |
! | AATCTTCCAAATTTCTAGGG+TGG | + | chr1_4:16606212-16606231 | None:intergenic | 35.0% |
GGCAATCTTCCAAATTTCTA+GGG | + | chr1_4:16606215-16606234 | None:intergenic | 35.0% | |
TGGCAATCTTCCAAATTTCT+AGG | + | chr1_4:16606216-16606235 | None:intergenic | 35.0% | |
! | GGTATTCGACGTTTGGAATA+CGG | + | chr1_4:16596324-16596343 | None:intergenic | 40.0% |
!! | GGAAAAAGGTATTCGACGTT+TGG | + | chr1_4:16596331-16596350 | None:intergenic | 40.0% |
GGAGAAGTTGAAAATGAGAG+AGG | + | chr1_4:16596401-16596420 | None:intergenic | 40.0% | |
TTTGTGTGTGCCCTAGAAAT+TGG | + | chr1_4:16596422-16596441 | None:intergenic | 40.0% | |
TCGGAGATTTCGTATAACTC+GGG | + | chr1_4:16596453-16596472 | None:intergenic | 40.0% | |
GTCGGAGATTTCGTATAACT+CGG | + | chr1_4:16596454-16596473 | None:intergenic | 40.0% | |
GGATGATACTGAATGTGATG+CGG | - | chr1_4:16596668-16596687 | Msa0153340:CDS | 40.0% | |
TCTATAATAAACCTCCGTCC+AGG | + | chr1_4:16596720-16596739 | None:intergenic | 40.0% | |
GAGTTGAAAGGAGAGTTGTT+TGG | - | chr1_4:16596891-16596910 | Msa0153340:CDS | 40.0% | |
TGCGGTTTGTGATAGGTATT+CGG | - | chr1_4:16596923-16596942 | Msa0153340:CDS | 40.0% | |
! | GATGATGTTGATGTTGCTTG+TGG | - | chr1_4:16597062-16597081 | Msa0153340:CDS | 40.0% |
CGGTTGAAAATTCGAATCCT+CGG | + | chr1_4:16597090-16597109 | None:intergenic | 40.0% | |
! | AGCTGATACGGCTTTAACAA+CGG | + | chr1_4:16597110-16597129 | None:intergenic | 40.0% |
TTAAAGCCGTATCAGCTTGT+CGG | - | chr1_4:16597113-16597132 | Msa0153340:CDS | 40.0% | |
TTAACACCGACAAGCTGATA+CGG | + | chr1_4:16597122-16597141 | None:intergenic | 40.0% | |
TTGTTGTATCGGAAGAGGAT+TGG | - | chr1_4:16597152-16597171 | Msa0153340:CDS | 40.0% | |
TGTCAGTATTGTGTCTGTGT+CGG | - | chr1_4:16597437-16597456 | Msa0153340:intron | 40.0% | |
ATGCCTTAGATCAGAAGTGA+CGG | - | chr1_4:16597475-16597494 | Msa0153340:intron | 40.0% | |
GTTCCAACAAACACAAACTC+GGG | + | chr1_4:16597532-16597551 | None:intergenic | 40.0% | |
! | TGGTACACTGTTTGGGATTT+AGG | - | chr1_4:16597605-16597624 | Msa0153340:intron | 40.0% |
! | GGTACACTGTTTGGGATTTA+GGG | - | chr1_4:16597606-16597625 | Msa0153340:intron | 40.0% |
! | GTACACTGTTTGGGATTTAG+GGG | - | chr1_4:16597607-16597626 | Msa0153340:intron | 40.0% |
! | TTGGGATTTAGGGGTTAGTA+TGG | - | chr1_4:16597616-16597635 | Msa0153340:intron | 40.0% |
! | GTGCCACTGTGATTTCATTA+TGG | - | chr1_4:16597700-16597719 | Msa0153340:intron | 40.0% |
CATGTGTCATACAGCCATAT+TGG | - | chr1_4:16597939-16597958 | Msa0153340:intron | 40.0% | |
AGCCATATTGGCAGATGAAA+TGG | - | chr1_4:16597951-16597970 | Msa0153340:intron | 40.0% | |
GCCATATTGGCAGATGAAAT+GGG | - | chr1_4:16597952-16597971 | Msa0153340:intron | 40.0% | |
AATCACTTGCACAACGATTC+TGG | - | chr1_4:16598109-16598128 | Msa0153340:intron | 40.0% | |
GCAGGACAAACTATAAGATG+TGG | + | chr1_4:16598136-16598155 | None:intergenic | 40.0% | |
! | AGTTTGTCCTGCTTCTGTTT+TGG | - | chr1_4:16598144-16598163 | Msa0153340:intron | 40.0% |
! | CAGTTTTCCAAAACAGAAGC+AGG | + | chr1_4:16598154-16598173 | None:intergenic | 40.0% |
!!! | CTGCTTCTGTTTTGGAAAAC+TGG | - | chr1_4:16598152-16598171 | Msa0153340:intron | 40.0% |
!!! | CTGTTTTGGAAAACTGGGAA+AGG | - | chr1_4:16598158-16598177 | Msa0153340:intron | 40.0% |
ATTGAAGGACAGAAAAGGAC+GGG | + | chr1_4:16598201-16598220 | None:intergenic | 40.0% | |
TTGAATTCCTTGTCCAAGTC+AGG | - | chr1_4:16598256-16598275 | Msa0153340:intron | 40.0% | |
!! | ATTCACTTTTCGAACGACAC+AGG | - | chr1_4:16598314-16598333 | Msa0153340:intron | 40.0% |
ATCGTAAAATCCTGAAGCGT+TGG | - | chr1_4:16598437-16598456 | Msa0153340:intron | 40.0% | |
TTAGCAGAGTAGAAGGTAAG+TGG | + | chr1_4:16598785-16598804 | None:intergenic | 40.0% | |
GTTTCATTCCGATTCTCAAG+TGG | - | chr1_4:16598905-16598924 | Msa0153340:intron | 40.0% | |
!! | ATTTTGATCATTGTGGGGTC+TGG | + | chr1_4:16599140-16599159 | None:intergenic | 40.0% |
TGACGTGAATATGAGGTAAG+CGG | + | chr1_4:16599187-16599206 | None:intergenic | 40.0% | |
GTGGAAATGACGTGAATATG+AGG | + | chr1_4:16599194-16599213 | None:intergenic | 40.0% | |
GAGTAAGATGCAAGAATCAG+TGG | + | chr1_4:16599213-16599232 | None:intergenic | 40.0% | |
TGCAATGTGTCCTGTTTGTT+GGG | - | chr1_4:16599244-16599263 | Msa0153340:CDS | 40.0% | |
!! | TTTGCTGATTCCCAACAAAC+AGG | + | chr1_4:16599257-16599276 | None:intergenic | 40.0% |
GGAAGGAAATCTGTTAGTTG+TGG | + | chr1_4:16599292-16599311 | None:intergenic | 40.0% | |
GAAAGGAAATGTGTATGTGG+TGG | + | chr1_4:16599333-16599352 | None:intergenic | 40.0% | |
ACTGTGTGATACATCCTCAT+GGG | - | chr1_4:16599374-16599393 | Msa0153340:intron | 40.0% | |
!! | TTCAGGTTTGAGGCTTTTAG+AGG | - | chr1_4:16599554-16599573 | Msa0153340:intron | 40.0% |
GAGAAGTTTCTTGAAAGGAG+TGG | - | chr1_4:16599898-16599917 | Msa0153340:intron | 40.0% | |
GAATTTGATGCCTTTGGACA+AGG | + | chr1_4:16600151-16600170 | None:intergenic | 40.0% | |
AATTCTACAGTAGCAGGGAA+AGG | + | chr1_4:16600259-16600278 | None:intergenic | 40.0% | |
TAATATGGATGAAACACCGG+AGG | + | chr1_4:16600502-16600521 | None:intergenic | 40.0% | |
GATAGAGATGACAGATTGAC+AGG | + | chr1_4:16600644-16600663 | None:intergenic | 40.0% | |
!!! | TCTCTATCTGTTGGTTTTGC+TGG | - | chr1_4:16600656-16600675 | Msa0153340:intron | 40.0% |
ACAGGAGTTATGGTCTATGT+TGG | - | chr1_4:16600727-16600746 | Msa0153340:intron | 40.0% | |
! | TTCAGGCGCCGTAAAATAAA+TGG | + | chr1_4:16600857-16600876 | None:intergenic | 40.0% |
! | ATGTGATGCAGCAACTTGTT+CGG | - | chr1_4:16600882-16600901 | Msa0153340:intron | 40.0% |
ACTTGTTCGGAAAACACAGA+AGG | - | chr1_4:16600895-16600914 | Msa0153340:intron | 40.0% | |
GCAGGTTCAATATGTCGTAA+TGG | - | chr1_4:16601041-16601060 | Msa0153340:intron | 40.0% | |
! | TGTCGTAATGGAAAAGCAAC+AGG | - | chr1_4:16601053-16601072 | Msa0153340:intron | 40.0% |
TTCTTGAAGTTCTACCTCGA+CGG | - | chr1_4:16601163-16601182 | Msa0153340:intron | 40.0% | |
!! | TCAAAGCCAAAAGCACCTAT+TGG | + | chr1_4:16601411-16601430 | None:intergenic | 40.0% |
ACAATGACTTCTCCATTCAC+CGG | - | chr1_4:16601469-16601488 | Msa0153340:CDS | 40.0% | |
GACATAATTTGGCACCAGTA+GGG | + | chr1_4:16601628-16601647 | None:intergenic | 40.0% | |
AGACATAATTTGGCACCAGT+AGG | + | chr1_4:16601629-16601648 | None:intergenic | 40.0% | |
AGAGTGAGACAAAGGACTAT+CGG | + | chr1_4:16601741-16601760 | None:intergenic | 40.0% | |
TGTTGTTGAGAGTGAGACAA+AGG | + | chr1_4:16601749-16601768 | None:intergenic | 40.0% | |
!! | GTCCTTTAAGTGGATTATGG+GGG | + | chr1_4:16601832-16601851 | None:intergenic | 40.0% |
AATCAACTTGACTGTGCTCT+TGG | - | chr1_4:16601876-16601895 | Msa0153340:CDS | 40.0% | |
AAAACCTAAAGGACCAATCC+AGG | - | chr1_4:16602037-16602056 | Msa0153340:CDS | 40.0% | |
AAAGGGATCCAGAAAAGAGT+TGG | - | chr1_4:16602158-16602177 | Msa0153340:intron | 40.0% | |
! | CCCATTGTTGTTGTTGTTGA+AGG | + | chr1_4:16602259-16602278 | None:intergenic | 40.0% |
CCTAGACCTAAAGGCTAAAA+GGG | + | chr1_4:16602305-16602324 | None:intergenic | 40.0% | |
ACCTAGACCTAAAGGCTAAA+AGG | + | chr1_4:16602306-16602325 | None:intergenic | 40.0% | |
AGATGAAGTTTGGGCCATTA+AGG | - | chr1_4:16602335-16602354 | Msa0153340:intron | 40.0% | |
! | AAGCCTTATCCCGCTAAATA+GGG | - | chr1_4:16602602-16602621 | Msa0153340:intron | 40.0% |
! | ATTTTGCCGACCCTATTTAG+CGG | + | chr1_4:16602615-16602634 | None:intergenic | 40.0% |
CTATTCCTCCGTCAATTGTT+TGG | - | chr1_4:16602989-16603008 | Msa0153340:intron | 40.0% | |
GTAACGTGCCAAACAATTGA+CGG | + | chr1_4:16603000-16603019 | None:intergenic | 40.0% | |
GAGAACACATTACACACCTA+GGG | + | chr1_4:16603039-16603058 | None:intergenic | 40.0% | |
TGAGAACACATTACACACCT+AGG | + | chr1_4:16603040-16603059 | None:intergenic | 40.0% | |
TTCGGCTTTCTGCATATTGT+TGG | - | chr1_4:16603149-16603168 | Msa0153340:intron | 40.0% | |
TAGGATCCCCTTTCTATCAT+TGG | + | chr1_4:16603229-16603248 | None:intergenic | 40.0% | |
CTTCCATCACTAAAGAAGAG+TGG | - | chr1_4:16603402-16603421 | Msa0153340:intron | 40.0% | |
TGACCACTCTTCTTTAGTGA+TGG | + | chr1_4:16603408-16603427 | None:intergenic | 40.0% | |
! | TGATATATTGGAGTGGGCTT+TGG | - | chr1_4:16603464-16603483 | Msa0153340:intron | 40.0% |
!! | TCATTGGGTTGACCTACAAA+CGG | - | chr1_4:16603490-16603509 | Msa0153340:intron | 40.0% |
! | GCTGATAATGACTGAAGAGT+TGG | - | chr1_4:16603685-16603704 | Msa0153340:intron | 40.0% |
GTAGAAACTAGAAACAGACG+AGG | - | chr1_4:16603765-16603784 | Msa0153340:intron | 40.0% | |
TCATCACAGTCATGACAATG+TGG | + | chr1_4:16603817-16603836 | None:intergenic | 40.0% | |
! | TTGTCATGACTGTGATGATG+TGG | - | chr1_4:16603819-16603838 | Msa0153340:intron | 40.0% |
ATTGGTCCAATTGCCAACAT+GGG | - | chr1_4:16603850-16603869 | Msa0153340:intron | 40.0% | |
GCTGCAACTCCATATTTGTA+TGG | - | chr1_4:16603872-16603891 | Msa0153340:intron | 40.0% | |
!!! | TTGTATGGCAGATTTTTGGC+CGG | - | chr1_4:16603887-16603906 | Msa0153340:intron | 40.0% |
TGTTATCGATGGAAGACTGT+TGG | + | chr1_4:16603913-16603932 | None:intergenic | 40.0% | |
CTTTCTCGTATAATTCGGTC+CGG | + | chr1_4:16604028-16604047 | None:intergenic | 40.0% | |
!! | CCAACAAAAGTGGAGGTATT+TGG | + | chr1_4:16604093-16604112 | None:intergenic | 40.0% |
!! | CCAAATACCTCCACTTTTGT+TGG | - | chr1_4:16604090-16604109 | Msa0153340:CDS | 40.0% |
GAAAGTTGGACCAACAAAAG+TGG | + | chr1_4:16604103-16604122 | None:intergenic | 40.0% | |
! | TCTCTTATATTTAGGACCGG+GGG | - | chr1_4:16604121-16604140 | Msa0153340:CDS | 40.0% |
CCTTCAAATGGAAAACCATC+CGG | + | chr1_4:16604345-16604364 | None:intergenic | 40.0% | |
!!! | TGCGATTTTTAGGACTGAGA+TGG | - | chr1_4:16604367-16604386 | Msa0153340:CDS | 40.0% |
GTCTTGTGATCATGCATTCT+TGG | + | chr1_4:16604458-16604477 | None:intergenic | 40.0% | |
!! | GACAAGGATGACATTGACTT+CGG | - | chr1_4:16604582-16604601 | Msa0153340:intron | 40.0% |
CTCAGACTCATGATTCTATG+AGG | + | chr1_4:16604712-16604731 | None:intergenic | 40.0% | |
CTCATAGAATCATGAGTCTG+AGG | - | chr1_4:16604710-16604729 | Msa0153340:intron | 40.0% | |
GAGTCTGAGGACTATTAATC+GGG | - | chr1_4:16604723-16604742 | Msa0153340:intron | 40.0% | |
AGTCAAATGCTACAGCAATG+AGG | + | chr1_4:16604847-16604866 | None:intergenic | 40.0% | |
TTCATTGCAAAGGGCAACAA+TGG | + | chr1_4:16604923-16604942 | None:intergenic | 40.0% | |
! | GGTTTTGCCTCAACAATGTT+GGG | + | chr1_4:16604972-16604991 | None:intergenic | 40.0% |
! | AGGTTTTGCCTCAACAATGT+TGG | + | chr1_4:16604973-16604992 | None:intergenic | 40.0% |
GTGAAGGATGATATGGGAAT+AGG | + | chr1_4:16604993-16605012 | None:intergenic | 40.0% | |
GTGTTGTCAAATTTCGGCTA+TGG | - | chr1_4:16605025-16605044 | Msa0153340:intron | 40.0% | |
AAATTTCGGCTATGGAGTTG+AGG | - | chr1_4:16605033-16605052 | Msa0153340:intron | 40.0% | |
AAAGGCCTGCATCTATATCT+TGG | + | chr1_4:16605332-16605351 | None:intergenic | 40.0% | |
GGACAAGGCTTAAACTTAAC+CGG | - | chr1_4:16605648-16605667 | Msa0153340:intron | 40.0% | |
AAACTTAACCGGAGCTGATA+CGG | - | chr1_4:16605659-16605678 | Msa0153340:intron | 40.0% | |
TACGGTTGTGATTCATGACA+TGG | - | chr1_4:16605677-16605696 | Msa0153340:intron | 40.0% | |
CTGCTTGTCTATCAATCTGT+GGG | + | chr1_4:16605710-16605729 | None:intergenic | 40.0% | |
TCTGCTTGTCTATCAATCTG+TGG | + | chr1_4:16605711-16605730 | None:intergenic | 40.0% | |
!! | GCTTTGTTTGACCAATTCGA+TGG | + | chr1_4:16605743-16605762 | None:intergenic | 40.0% |
CAAAGCCTGTAACCATATAC+AGG | - | chr1_4:16605757-16605776 | Msa0153340:CDS | 40.0% | |
! | GTTCCCTTTTAATGCTTTGG+TGG | - | chr1_4:16605844-16605863 | Msa0153340:CDS | 40.0% |
GAGATTGCAAAGAGAAAGCT+AGG | - | chr1_4:16605935-16605954 | Msa0153340:CDS | 40.0% | |
!! | TGCTGCTGTTCTAGAATCTA+TGG | - | chr1_4:16605964-16605983 | Msa0153340:CDS | 40.0% |
GGAGAAAAAGTAGAAGACAG+AGG | + | chr1_4:16606099-16606118 | None:intergenic | 40.0% | |
!!! | GTCTTCTACTTTTTCTCCCT+AGG | - | chr1_4:16606101-16606120 | Msa0153340:CDS | 40.0% |
AAATTGGCCACCCTTGAAAT+CGG | - | chr1_4:16606169-16606188 | Msa0153340:CDS | 40.0% | |
!! | TTTAGTACCGATTTCAAGGG+TGG | + | chr1_4:16606179-16606198 | None:intergenic | 40.0% |
GGTCGTTTAAGAACACGTGA+GGG | + | chr1_4:16596504-16596523 | None:intergenic | 45.0% | |
AGGTCGTTTAAGAACACGTG+AGG | + | chr1_4:16596505-16596524 | None:intergenic | 45.0% | |
TGATACTGAATGTGATGCGG+CGG | - | chr1_4:16596671-16596690 | Msa0153340:CDS | 45.0% | |
AGGATTTCGGTGGAGTTGAA+AGG | - | chr1_4:16596879-16596898 | Msa0153340:intron | 45.0% | |
!! | GGAGAGTTGTTTGGTTCTTC+TGG | - | chr1_4:16596900-16596919 | Msa0153340:CDS | 45.0% |
!! | GTTGTTTGGTTCTTCTGGTG+CGG | - | chr1_4:16596905-16596924 | Msa0153340:CDS | 45.0% |
TGCTGTTGTTGTATCGGAAG+AGG | - | chr1_4:16597147-16597166 | Msa0153340:CDS | 45.0% | |
TTGTATCGGAAGAGGATTGG+AGG | - | chr1_4:16597155-16597174 | Msa0153340:CDS | 45.0% | |
TCTATGCAGCAACACATGCA+CGG | - | chr1_4:16597248-16597267 | Msa0153340:intron | 45.0% | |
!! | TGGTGTTGCATTCATTGTCG+TGG | - | chr1_4:16597316-16597335 | Msa0153340:intron | 45.0% |
!! | CAATCTTGGTGCTGCATCAT+TGG | - | chr1_4:16597729-16597748 | Msa0153340:intron | 45.0% |
GCCCATTTCATCTGCCAATA+TGG | + | chr1_4:16597956-16597975 | None:intergenic | 45.0% | |
TGAAATGGGCCTTGGCAAAA+CGG | - | chr1_4:16597966-16597985 | Msa0153340:intron | 45.0% | |
GGGAAAGGGAACTAAAGAAG+TGG | - | chr1_4:16598173-16598192 | Msa0153340:intron | 45.0% | |
!! | AAATCCTGAAGCGTTGGAAG+TGG | - | chr1_4:16598443-16598462 | Msa0153340:intron | 45.0% |
ACTCAATTCGTCGCTGAAGT+CGG | - | chr1_4:16598753-16598772 | Msa0153340:intron | 45.0% | |
TGAATATGAGGTAAGCGGTG+GGG | + | chr1_4:16599182-16599201 | None:intergenic | 45.0% | |
GTGAATATGAGGTAAGCGGT+GGG | + | chr1_4:16599183-16599202 | None:intergenic | 45.0% | |
CTGCAATGTGTCCTGTTTGT+TGG | - | chr1_4:16599243-16599262 | Msa0153340:CDS | 45.0% | |
CACTGTGTGATACATCCTCA+TGG | - | chr1_4:16599373-16599392 | Msa0153340:intron | 45.0% | |
TGGGCCCATTACATTACGTT+TGG | - | chr1_4:16599408-16599427 | Msa0153340:CDS | 45.0% | |
!! | GTTTGGTTTGAAGCAATGGG+TGG | - | chr1_4:16599425-16599444 | Msa0153340:CDS | 45.0% |
! | GTTTGAAGCAATGGGTGGAT+GGG | - | chr1_4:16599430-16599449 | Msa0153340:CDS | 45.0% |
TTTGATGCCTTTGGACAAGG+AGG | + | chr1_4:16600148-16600167 | None:intergenic | 45.0% | |
CAGGGAGAATTTGATGCCTT+TGG | + | chr1_4:16600157-16600176 | None:intergenic | 45.0% | |
GGGTAGAGAATTCGAAGACA+GGG | + | chr1_4:16600175-16600194 | None:intergenic | 45.0% | |
AGGGTAGAGAATTCGAAGAC+AGG | + | chr1_4:16600176-16600195 | None:intergenic | 45.0% | |
TGTAGTAACAGCTACTGCCA+GGG | - | chr1_4:16600601-16600620 | Msa0153340:intron | 45.0% | |
CTACTGCCAGGGAAAACAAA+AGG | - | chr1_4:16600612-16600631 | Msa0153340:intron | 45.0% | |
GCTGCATCACATCAGATTTC+AGG | + | chr1_4:16600874-16600893 | None:intergenic | 45.0% | |
GCAACAGGAACATGCTTACA+AGG | - | chr1_4:16601068-16601087 | Msa0153340:intron | 45.0% | |
!! | ATCGTGCTGTTTCACAAGCT+CGG | - | chr1_4:16601106-16601125 | Msa0153340:intron | 45.0% |
GTACAAAAGAGCGAACCTTG+CGG | + | chr1_4:16601215-16601234 | None:intergenic | 45.0% | |
! | GATGGTTCGCAATCTGGAAT+AGG | + | chr1_4:16601326-16601345 | None:intergenic | 45.0% |
! | CGAACCATCCCTTGTTGATT+AGG | - | chr1_4:16601337-16601356 | Msa0153340:intron | 45.0% |
TTCGCCTAATCAACAAGGGA+TGG | + | chr1_4:16601344-16601363 | None:intergenic | 45.0% | |
AGGATGTTGTTCGCTTTGCT+AGG | - | chr1_4:16601376-16601395 | Msa0153340:intron | 45.0% | |
! | CTGCATCCAATAGGTGCTTT+TGG | - | chr1_4:16601402-16601421 | Msa0153340:intron | 45.0% |
CAATGACTTCTCCATTCACC+GGG | - | chr1_4:16601470-16601489 | Msa0153340:CDS | 45.0% | |
GTAGAAGATTACCCGGTGAA+TGG | + | chr1_4:16601484-16601503 | None:intergenic | 45.0% | |
CCAGTAGGGTTAAGTAAACC+TGG | + | chr1_4:16601614-16601633 | None:intergenic | 45.0% | |
CCAGGTTTACTTAACCCTAC+TGG | - | chr1_4:16601611-16601630 | Msa0153340:intron | 45.0% | |
! | CTGGTGCCAAATTATGTCTG+CGG | - | chr1_4:16601630-16601649 | Msa0153340:intron | 45.0% |
AAAGGGCCGCAGACATAATT+TGG | + | chr1_4:16601639-16601658 | None:intergenic | 45.0% | |
GTCCCCCATAATCCACTTAA+AGG | - | chr1_4:16601827-16601846 | Msa0153340:CDS | 45.0% | |
!! | GTTTCCTGGATTGGTCCTTT+AGG | + | chr1_4:16602044-16602063 | None:intergenic | 45.0% |
AAAGGACCAATCCAGGAAAC+TGG | - | chr1_4:16602044-16602063 | Msa0153340:CDS | 45.0% | |
GTTTGACCAGTTTCCTGGAT+TGG | + | chr1_4:16602053-16602072 | None:intergenic | 45.0% | |
GTTAGCCAAAATCACGTCTG+CGG | + | chr1_4:16602084-16602103 | None:intergenic | 45.0% | |
TATAGAGCTCCCTCCACAAA+GGG | - | chr1_4:16602141-16602160 | Msa0153340:intron | 45.0% | |
TTTCTGGATCCCTTTGTGGA+GGG | + | chr1_4:16602153-16602172 | None:intergenic | 45.0% | |
! | TTTTCTGGATCCCTTTGTGG+AGG | + | chr1_4:16602154-16602173 | None:intergenic | 45.0% |
! | CTCTTTTCTGGATCCCTTTG+TGG | + | chr1_4:16602157-16602176 | None:intergenic | 45.0% |
CTAAAGGCTAAAAGGGAGTG+GGG | + | chr1_4:16602298-16602317 | None:intergenic | 45.0% | |
CCTAAAGGCTAAAAGGGAGT+GGG | + | chr1_4:16602299-16602318 | None:intergenic | 45.0% | |
ACCTAAAGGCTAAAAGGGAG+TGG | + | chr1_4:16602300-16602319 | None:intergenic | 45.0% | |
!! | CCCTTTTAGCCTTTAGGTCT+AGG | - | chr1_4:16602302-16602321 | Msa0153340:intron | 45.0% |
! | AGCCTTTAGGTCTAGGTTGA+AGG | - | chr1_4:16602309-16602328 | Msa0153340:intron | 45.0% |
CTCCTTCAACCTAGACCTAA+AGG | + | chr1_4:16602314-16602333 | None:intergenic | 45.0% | |
CTATTTAGCGGGATAAGGCT+TGG | + | chr1_4:16602603-16602622 | None:intergenic | 45.0% | |
! | CAAGCCTTATCCCGCTAAAT+AGG | - | chr1_4:16602601-16602620 | Msa0153340:intron | 45.0% |
CTTATCCCGCTAAATAGGGT+CGG | - | chr1_4:16602606-16602625 | Msa0153340:intron | 45.0% | |
! | TTTTGCCGACCCTATTTAGC+GGG | + | chr1_4:16602614-16602633 | None:intergenic | 45.0% |
AAGTTGTCAATCCCAGAGAG+CGG | + | chr1_4:16602845-16602864 | None:intergenic | 45.0% | |
ATGCTGAGATTGAGCTACTC+TGG | - | chr1_4:16603355-16603374 | Msa0153340:intron | 45.0% | |
TGAGCTACTCTGGATAATGC+AGG | - | chr1_4:16603365-16603384 | Msa0153340:intron | 45.0% | |
! | CTGGATAATGCAGGCTTTAG+CGG | - | chr1_4:16603374-16603393 | Msa0153340:intron | 45.0% |
!! | AGTGGGCTTTGGATGTCATT+GGG | - | chr1_4:16603475-16603494 | Msa0153340:intron | 45.0% |
TTGACCTACAAACGGCTTGA+TGG | - | chr1_4:16603498-16603517 | Msa0153340:intron | 45.0% | |
CTAGAAACAGACGAGGTTCT+AGG | - | chr1_4:16603772-16603791 | Msa0153340:intron | 45.0% | |
CATTGGTCCAATTGCCAACA+TGG | - | chr1_4:16603849-16603868 | Msa0153340:intron | 45.0% | |
CAGGTCAAAGCTACACATTC+AGG | + | chr1_4:16603946-16603965 | None:intergenic | 45.0% | |
!! | CTGAATGTGTAGCTTTGACC+TGG | - | chr1_4:16603944-16603963 | Msa0153340:intron | 45.0% |
AGTTGGACCAACAAAAGTGG+AGG | + | chr1_4:16604100-16604119 | None:intergenic | 45.0% | |
! | CTCTTATATTTAGGACCGGG+GGG | - | chr1_4:16604122-16604141 | Msa0153340:CDS | 45.0% |
GCATAATAATGTACTCCCCC+CGG | + | chr1_4:16604140-16604159 | None:intergenic | 45.0% | |
! | AGTCTGTTTTCACGAGAAGC+TGG | - | chr1_4:16604239-16604258 | Msa0153340:intron | 45.0% |
! | GTCTGTTTTCACGAGAAGCT+GGG | - | chr1_4:16604240-16604259 | Msa0153340:intron | 45.0% |
! | TCTGTTTTCACGAGAAGCTG+GGG | - | chr1_4:16604241-16604260 | Msa0153340:intron | 45.0% |
GGAAAGATAACCCTCTCTTC+CGG | - | chr1_4:16604323-16604342 | Msa0153340:intron | 45.0% | |
! | CCGGATGGTTTTCCATTTGA+AGG | - | chr1_4:16604342-16604361 | Msa0153340:CDS | 45.0% |
TCCTTGTCAATCCCTGTCAA+GGG | + | chr1_4:16604570-16604589 | None:intergenic | 45.0% | |
ATCCTTGTCAATCCCTGTCA+AGG | + | chr1_4:16604571-16604590 | None:intergenic | 45.0% | |
ATTGTCACCGCTTAATGACC+AGG | - | chr1_4:16604798-16604817 | Msa0153340:CDS | 45.0% | |
TATCGAGCCTGGTCATTAAG+CGG | + | chr1_4:16604808-16604827 | None:intergenic | 45.0% | |
TGCTACAGCAATGAGGTCAA+TGG | + | chr1_4:16604840-16604859 | None:intergenic | 45.0% | |
TGTTTACGTCGAGAGCTTTG+TGG | + | chr1_4:16604870-16604889 | None:intergenic | 45.0% | |
CCTGTTGGGTTCATTGCAAA+GGG | + | chr1_4:16604932-16604951 | None:intergenic | 45.0% | |
! | ACTGATCATGTTGGCCTGTT+GGG | + | chr1_4:16604946-16604965 | None:intergenic | 45.0% |
GTTGGGTTCACTGATCATGT+TGG | + | chr1_4:16604955-16604974 | None:intergenic | 45.0% | |
CAGTGAACCCAACATTGTTG+AGG | - | chr1_4:16604962-16604981 | Msa0153340:intron | 45.0% | |
CTTGGCCAAGATATAGATGC+AGG | - | chr1_4:16605324-16605343 | Msa0153340:intron | 45.0% | |
AGAGTAAGGAAAGCAGCACT+TGG | + | chr1_4:16605522-16605541 | None:intergenic | 45.0% | |
TGCTTGCTTTCAACTAGAGC+TGG | - | chr1_4:16605624-16605643 | Msa0153340:intron | 45.0% | |
TTGCTTTCAACTAGAGCTGG+TGG | - | chr1_4:16605627-16605646 | Msa0153340:intron | 45.0% | |
AATCACAACCGTATCAGCTC+CGG | + | chr1_4:16605670-16605689 | None:intergenic | 45.0% | |
GAAGATCGTTGCCATCGAAT+TGG | - | chr1_4:16605729-16605748 | Msa0153340:CDS | 45.0% | |
TTGAGCCAATGGAAACGCTT+AGG | - | chr1_4:16606061-16606080 | Msa0153340:CDS | 45.0% | |
GGGTGGCCAATTTGTCTAAA+TGG | + | chr1_4:16606162-16606181 | None:intergenic | 45.0% | |
GCTTTGCCACCCTAGAAATT+TGG | - | chr1_4:16606203-16606222 | Msa0153340:exon | 45.0% | |
!! | CAATGCAGGAGCTTTGTTCA+AGG | + | chr1_4:16606375-16606394 | None:intergenic | 45.0% |
!!! | TTTTCTTAAAAAAATTATAA+AGG | + | chr1_4:16599610-16599629 | None:intergenic | 5.0% |
!!! | TAAATAAATATAAGTTATTT+TGG | - | chr1_4:16602733-16602752 | Msa0153340:intron | 5.0% |
! | GAATGTAAAGGCGTAGGCGT+AGG | + | chr1_4:16596361-16596380 | None:intergenic | 50.0% |
AGAGAGGAAAGTGACAAGCG+CGG | + | chr1_4:16596385-16596404 | None:intergenic | 50.0% | |
ACGAAATCTCCGACGACGAA+TGG | - | chr1_4:16596460-16596479 | Msa0153340:three_prime_UTR | 50.0% | |
CGAAATCTCCGACGACGAAT+GGG | - | chr1_4:16596461-16596480 | Msa0153340:three_prime_UTR | 50.0% | |
GTGATTCTCCCATTCGTCGT+CGG | + | chr1_4:16596472-16596491 | None:intergenic | 50.0% | |
TAGAAAGATTCGAGAGGCGG+AGG | + | chr1_4:16596537-16596556 | None:intergenic | 50.0% | |
GAAACGGTTACAGACGAAGG+AGG | + | chr1_4:16596591-16596610 | None:intergenic | 50.0% | |
TCGGAAACGGTTACAGACGA+AGG | + | chr1_4:16596594-16596613 | None:intergenic | 50.0% | |
TTCAACGCAATCGTCGTCGT+CGG | + | chr1_4:16596613-16596632 | None:intergenic | 50.0% | |
GATGAGGATGAAGAGGATGC+TGG | - | chr1_4:16596741-16596760 | Msa0153340:CDS | 50.0% | |
! | AAGCTTTGCAGAAGTGTGCG+AGG | - | chr1_4:16596859-16596878 | Msa0153340:intron | 50.0% |
! | GCAGAAGTGTGCGAGGATTT+CGG | - | chr1_4:16596866-16596885 | Msa0153340:intron | 50.0% |
CTTCTGGTGCGGTTTGTGAT+AGG | - | chr1_4:16596916-16596935 | Msa0153340:CDS | 50.0% | |
! | TGATGTTGCTTGTGGTTCCG+AGG | - | chr1_4:16597070-16597089 | Msa0153340:CDS | 50.0% |
TATCGGAAGAGGATTGGAGG+AGG | - | chr1_4:16597158-16597177 | Msa0153340:CDS | 50.0% | |
TATTGTGTCTGTGTCGGACC+CGG | - | chr1_4:16597443-16597462 | Msa0153340:intron | 50.0% | |
! | TCTAAGGCATGCCTAGTGTC+CGG | + | chr1_4:16597465-16597484 | None:intergenic | 50.0% |
GCTCCCGAGTTTGTGTTTGT+TGG | - | chr1_4:16597526-16597545 | Msa0153340:intron | 50.0% | |
TTGGCAGATGAAATGGGCCT+TGG | - | chr1_4:16597958-16597977 | Msa0153340:intron | 50.0% | |
! | ACACCTGAACCGTTTTGCCA+AGG | + | chr1_4:16597978-16597997 | None:intergenic | 50.0% |
GTGCAGACCCGTGATATTGA+AGG | + | chr1_4:16598216-16598235 | None:intergenic | 50.0% | |
!! | AGGCAATCCTGACTTGGACA+AGG | + | chr1_4:16598266-16598285 | None:intergenic | 50.0% |
GGATGAGGCACATGCTTTGA+AGG | - | chr1_4:16598480-16598499 | Msa0153340:intron | 50.0% | |
AACCAACGCTTGATGCTGAC+AGG | - | chr1_4:16598553-16598572 | Msa0153340:intron | 50.0% | |
ACCAACGCTTGATGCTGACA+GGG | - | chr1_4:16598554-16598573 | Msa0153340:intron | 50.0% | |
AAGAGGAGTCCTCTTCCCTA+TGG | - | chr1_4:16599108-16599127 | Msa0153340:intron | 50.0% | |
TGGCTACTACCATAGGGAAG+AGG | + | chr1_4:16599120-16599139 | None:intergenic | 50.0% | |
CGTGAATATGAGGTAAGCGG+TGG | + | chr1_4:16599184-16599203 | None:intergenic | 50.0% | |
ACAGGACACATTGCAGCAGA+GGG | + | chr1_4:16599239-16599258 | None:intergenic | 50.0% | |
AACAGGACACATTGCAGCAG+AGG | + | chr1_4:16599240-16599259 | None:intergenic | 50.0% | |
GTGTGATACATCCTCATGGG+AGG | - | chr1_4:16599377-16599396 | Msa0153340:CDS | 50.0% | |
CTCATGGGAGGTTCATGACT+GGG | - | chr1_4:16599389-16599408 | Msa0153340:CDS | 50.0% | |
! | GGTTTGAAGCAATGGGTGGA+TGG | - | chr1_4:16599429-16599448 | Msa0153340:CDS | 50.0% |
AATGGGTGGATGGGACTAAG+CGG | - | chr1_4:16599439-16599458 | Msa0153340:intron | 50.0% | |
GGACTAAGCGGCAAAAGTTG+AGG | - | chr1_4:16599451-16599470 | Msa0153340:intron | 50.0% | |
GAGACACTGCAGACTCTTAG+AGG | - | chr1_4:16600114-16600133 | Msa0153340:intron | 50.0% | |
TCTGCTTCCTCCTTGTCCAA+AGG | - | chr1_4:16600138-16600157 | Msa0153340:intron | 50.0% | |
TCTACAGTAGCAGGGAAAGG+CGG | + | chr1_4:16600256-16600275 | None:intergenic | 50.0% | |
GCAGTGCTGTGAAGGCTAAA+TGG | + | chr1_4:16600302-16600321 | None:intergenic | 50.0% | |
GTTAGGCAAGCAATAGTGCC+AGG | + | chr1_4:16600336-16600355 | None:intergenic | 50.0% | |
GTGTAGTAACAGCTACTGCC+AGG | - | chr1_4:16600600-16600619 | Msa0153340:intron | 50.0% | |
! | AAGGCACACTGTGTTACTGC+AGG | - | chr1_4:16601023-16601042 | Msa0153340:intron | 50.0% |
TGCTTACAAGGAAGCCATCG+AGG | - | chr1_4:16601080-16601099 | Msa0153340:intron | 50.0% | |
AACAGCACGATACTCCTCGA+TGG | + | chr1_4:16601097-16601116 | None:intergenic | 50.0% | |
ACAAGGGATGGTTCGCAATC+TGG | + | chr1_4:16601332-16601351 | None:intergenic | 50.0% | |
GCTAGGAAGCTGCATCCAAT+AGG | - | chr1_4:16601393-16601412 | Msa0153340:intron | 50.0% | |
GTCTGTTGCAATGAGGTTCC+AGG | - | chr1_4:16601593-16601612 | Msa0153340:CDS | 50.0% | |
! | AAGGACCGCAGACGTGATTT+TGG | - | chr1_4:16602076-16602095 | Msa0153340:intron | 50.0% |
! | TCCTGTGCTACTGACAAGCA+GGG | + | chr1_4:16602106-16602125 | None:intergenic | 50.0% |
CTATAGAGCTCCCTCCACAA+AGG | - | chr1_4:16602140-16602159 | Msa0153340:intron | 50.0% | |
!! | CCCACTCCCTTTTAGCCTTT+AGG | - | chr1_4:16602296-16602315 | Msa0153340:intron | 50.0% |
CGACCCTATTTAGCGGGATA+AGG | + | chr1_4:16602608-16602627 | None:intergenic | 50.0% | |
CCGACCTTGAAACTGGGATA+GGG | + | chr1_4:16602812-16602831 | None:intergenic | 50.0% | |
CCCTATCCCAGTTTCAAGGT+CGG | - | chr1_4:16602809-16602828 | Msa0153340:intron | 50.0% | |
ACGTGCCAAACAATTGACGG+AGG | + | chr1_4:16602997-16603016 | None:intergenic | 50.0% | |
!! | GAGTGGGCTTTGGATGTCAT+TGG | - | chr1_4:16603474-16603493 | Msa0153340:intron | 50.0% |
CCTTCCATCAAGCCGTTTGT+AGG | + | chr1_4:16603505-16603524 | None:intergenic | 50.0% | |
CCTACAAACGGCTTGATGGA+AGG | - | chr1_4:16603502-16603521 | Msa0153340:intron | 50.0% | |
TTGCAGCCCATGTTGGCAAT+TGG | + | chr1_4:16603859-16603878 | None:intergenic | 50.0% | |
TATGGAGTTGCAGCCCATGT+TGG | + | chr1_4:16603866-16603885 | None:intergenic | 50.0% | |
ATCGATGGAAGACTGTTGGC+CGG | + | chr1_4:16603909-16603928 | None:intergenic | 50.0% | |
CTCGTATAATTCGGTCCGGA+TGG | + | chr1_4:16604024-16604043 | None:intergenic | 50.0% | |
! | CTGTTTTCACGAGAAGCTGG+GGG | - | chr1_4:16604242-16604261 | Msa0153340:intron | 50.0% |
AGATAACCCTCTCTTCCGGA+TGG | - | chr1_4:16604327-16604346 | Msa0153340:CDS | 50.0% | |
GGAAAACCATCCGGAAGAGA+GGG | + | chr1_4:16604336-16604355 | None:intergenic | 50.0% | |
TGGAAAACCATCCGGAAGAG+AGG | + | chr1_4:16604337-16604356 | None:intergenic | 50.0% | |
CTCTGCAAGAGATGCTGACA+TGG | - | chr1_4:16604514-16604533 | Msa0153340:CDS | 50.0% | |
CAGAGAGGTGGCTAAGATAG+AGG | - | chr1_4:16604537-16604556 | Msa0153340:CDS | 50.0% | |
! | AGAGGCTTTTGACCCTTGAC+AGG | - | chr1_4:16604555-16604574 | Msa0153340:CDS | 50.0% |
! | GAGGCTTTTGACCCTTGACA+GGG | - | chr1_4:16604556-16604575 | Msa0153340:CDS | 50.0% |
ACCCTTGACAGGGATTGACA+AGG | - | chr1_4:16604566-16604585 | Msa0153340:intron | 50.0% | |
! | GGTTTGTTCACTATCGAGCC+TGG | + | chr1_4:16604819-16604838 | None:intergenic | 50.0% |
CCCTTTGCAATGAACCCAAC+AGG | - | chr1_4:16604929-16604948 | Msa0153340:intron | 50.0% | |
GCCTGTTGGGTTCATTGCAA+AGG | + | chr1_4:16604933-16604952 | None:intergenic | 50.0% | |
! | CACTGATCATGTTGGCCTGT+TGG | + | chr1_4:16604947-16604966 | None:intergenic | 50.0% |
!! | GCTATGGAGTTGAGGCATTG+CGG | - | chr1_4:16605041-16605060 | Msa0153340:intron | 50.0% |
TGTCATGCTGCGAAGTAGAC+TGG | + | chr1_4:16605470-16605489 | None:intergenic | 50.0% | |
CTATTTGACTCCCAGCACAC+AGG | - | chr1_4:16605545-16605564 | Msa0153340:CDS | 50.0% | |
! | TCAACTAGAGCTGGTGGACA+AGG | - | chr1_4:16605633-16605652 | Msa0153340:intron | 50.0% |
GATCATATTCCACTGCAGGC+TGG | - | chr1_4:16605880-16605899 | Msa0153340:CDS | 50.0% | |
GACATGCCTGAGAAGACGAT+GGG | - | chr1_4:16606004-16606023 | Msa0153340:CDS | 50.0% | |
ATCTCTCCCATCGTCTTCTC+AGG | + | chr1_4:16606013-16606032 | None:intergenic | 50.0% | |
!! | TGCAGGAGCTTTGTTCAAGG+AGG | + | chr1_4:16606372-16606391 | None:intergenic | 50.0% |
!! | CATGAGAGCGTCATCAGTCG+CGG | - | chr1_4:16596295-16596314 | Msa0153340:three_prime_UTR | 55.0% |
!! | ATGAGAGCGTCATCAGTCGC+GGG | - | chr1_4:16596296-16596315 | Msa0153340:three_prime_UTR | 55.0% |
GCGTAGGCGTAGGTGGAAAA+AGG | + | chr1_4:16596345-16596364 | None:intergenic | 55.0% | |
GACAAGCGCGGGGAATGTAA+AGG | + | chr1_4:16596373-16596392 | None:intergenic | 55.0% | |
AGAGGAAAGTGACAAGCGCG+GGG | + | chr1_4:16596383-16596402 | None:intergenic | 55.0% | |
GAGAGGAAAGTGACAAGCGC+GGG | + | chr1_4:16596384-16596403 | None:intergenic | 55.0% | |
AAAGATTCGAGAGGCGGAGG+AGG | + | chr1_4:16596534-16596553 | None:intergenic | 55.0% | |
GTTACAGACGAAGGAGGAGG+AGG | + | chr1_4:16596585-16596604 | None:intergenic | 55.0% | |
ACGGTTACAGACGAAGGAGG+AGG | + | chr1_4:16596588-16596607 | None:intergenic | 55.0% | |
GCAATCGTCGTCGTCGGAAA+CGG | + | chr1_4:16596607-16596626 | None:intergenic | 55.0% | |
GAGGATGAAGAGGATGCTGG+AGG | - | chr1_4:16596744-16596763 | Msa0153340:CDS | 55.0% | |
GAAGAGGATGCTGGAGGTAG+TGG | - | chr1_4:16596750-16596769 | Msa0153340:intron | 55.0% | |
GAAGTGTGCGAGGATTTCGG+TGG | - | chr1_4:16596869-16596888 | Msa0153340:intron | 55.0% | |
CTAAGGCATGCCTAGTGTCC+GGG | + | chr1_4:16597464-16597483 | None:intergenic | 55.0% | |
GCGCCGTCACTTCTGATCTA+AGG | + | chr1_4:16597481-16597500 | None:intergenic | 55.0% | |
TGGAGGAGGCAATCCTGACT+TGG | + | chr1_4:16598272-16598291 | None:intergenic | 55.0% | |
AGCTCCACTTCCAACGCTTC+AGG | + | chr1_4:16598450-16598469 | None:intergenic | 55.0% | |
GAAGTGGAGCTGTGTGCTGA+TGG | - | chr1_4:16598459-16598478 | Msa0153340:intron | 55.0% | |
! | GAGCTGTGTGCTGATGGATG+AGG | - | chr1_4:16598465-16598484 | Msa0153340:intron | 55.0% |
TCCCTGTCAGCATCAAGCGT+TGG | + | chr1_4:16598558-16598577 | None:intergenic | 55.0% | |
GGGAAGAGGACTCCTCTTAG+AGG | + | chr1_4:16599106-16599125 | None:intergenic | 55.0% | |
GGGGTCTGGCTACTACCATA+GGG | + | chr1_4:16599126-16599145 | None:intergenic | 55.0% | |
TGGGGTCTGGCTACTACCAT+AGG | + | chr1_4:16599127-16599146 | None:intergenic | 55.0% | |
ATGAGGTAAGCGGTGGGGAT+GGG | + | chr1_4:16599177-16599196 | None:intergenic | 55.0% | |
TATGAGGTAAGCGGTGGGGA+TGG | + | chr1_4:16599178-16599197 | None:intergenic | 55.0% | |
GACACATTGCAGCAGAGGGA+GGG | + | chr1_4:16599235-16599254 | None:intergenic | 55.0% | |
!! | TGTGTATGTGGTGGGCTGAG+CGG | + | chr1_4:16599324-16599343 | None:intergenic | 55.0% |
CCAGTCATGAACCTCCCATG+AGG | + | chr1_4:16599391-16599410 | None:intergenic | 55.0% | |
CCTCATGGGAGGTTCATGAC+TGG | - | chr1_4:16599388-16599407 | Msa0153340:CDS | 55.0% | |
TACAGTAGCAGGGAAAGGCG+GGG | + | chr1_4:16600254-16600273 | None:intergenic | 55.0% | |
CTACAGTAGCAGGGAAAGGC+GGG | + | chr1_4:16600255-16600274 | None:intergenic | 55.0% | |
ATAGTGCCAGGTGTGCAGGT+AGG | + | chr1_4:16600324-16600343 | None:intergenic | 55.0% | |
AGCAATAGTGCCAGGTGTGC+AGG | + | chr1_4:16600328-16600347 | None:intergenic | 55.0% | |
ACCCTGCTTGTCAGTAGCAC+AGG | - | chr1_4:16602102-16602121 | Msa0153340:intron | 55.0% | |
! | GTCCTGTGCTACTGACAAGC+AGG | + | chr1_4:16602107-16602126 | None:intergenic | 55.0% |
GCCGACCTTGAAACTGGGAT+AGG | + | chr1_4:16602813-16602832 | None:intergenic | 55.0% | |
GAGTGGCCGACCTTGAAACT+GGG | + | chr1_4:16602818-16602837 | None:intergenic | 55.0% | |
GTCAATCCCAGAGAGCGGAA+CGG | + | chr1_4:16602840-16602859 | None:intergenic | 55.0% | |
! | TTTTCACGAGAAGCTGGGGG+TGG | - | chr1_4:16604245-16604264 | Msa0153340:intron | 55.0% |
GAGATGCTGACATGGCAGAG+AGG | - | chr1_4:16604522-16604541 | Msa0153340:CDS | 55.0% | |
ATGCTGACATGGCAGAGAGG+TGG | - | chr1_4:16604525-16604544 | Msa0153340:CDS | 55.0% | |
CTCTCTGCTACCTGTGTGCT+GGG | + | chr1_4:16605558-16605577 | None:intergenic | 55.0% | |
CACTGCAGGCTGGTGACAAA+GGG | - | chr1_4:16605890-16605909 | Msa0153340:CDS | 55.0% | |
GGACATGCCTGAGAAGACGA+TGG | - | chr1_4:16606003-16606022 | Msa0153340:CDS | 55.0% | |
! | AAAGGCGTAGGCGTAGGCGT+AGG | + | chr1_4:16596355-16596374 | None:intergenic | 60.0% |
! | CGCGGGGAATGTAAAGGCGT+AGG | + | chr1_4:16596367-16596386 | None:intergenic | 60.0% |
ACAGACGAAGGAGGAGGAGG+AGG | + | chr1_4:16596582-16596601 | None:intergenic | 60.0% | |
! | GAGGATGCTGGAGGTAGTGG+TGG | - | chr1_4:16596753-16596772 | Msa0153340:intron | 60.0% |
! | TGCTGGAGGTAGTGGTGGTG+TGG | - | chr1_4:16596758-16596777 | Msa0153340:intron | 60.0% |
CAGAAGTGACGGCGCTTCAG+AGG | - | chr1_4:16597486-16597505 | Msa0153340:intron | 60.0% | |
GGGCCTTGGCAAAACGGTTC+AGG | - | chr1_4:16597972-16597991 | Msa0153340:intron | 60.0% | |
TGCACGCGCAGCATACTGCA+AGG | - | chr1_4:16598231-16598250 | Msa0153340:intron | 60.0% | |
TGAGGTAAGCGGTGGGGATG+GGG | + | chr1_4:16599176-16599195 | None:intergenic | 60.0% | |
GGACACATTGCAGCAGAGGG+AGG | + | chr1_4:16599236-16599255 | None:intergenic | 60.0% | |
GCAGGTAGGCAGTGCTGTGA+AGG | + | chr1_4:16600310-16600329 | None:intergenic | 60.0% | |
! | ACCGGAAGCACGCAGCGATT+AGG | - | chr1_4:16601778-16601797 | Msa0153340:CDS | 60.0% |
CCCTAATCGCTGCGTGCTTC+CGG | + | chr1_4:16601782-16601801 | None:intergenic | 60.0% | |
! | CCGGAAGCACGCAGCGATTA+GGG | - | chr1_4:16601779-16601798 | Msa0153340:CDS | 60.0% |
GCGGCCCTATCCCAGTTTCA+AGG | - | chr1_4:16602805-16602824 | Msa0153340:intron | 60.0% | |
GGAGTGGCCGACCTTGAAAC+TGG | + | chr1_4:16602819-16602838 | None:intergenic | 60.0% | |
CCTCTCTGCTACCTGTGTGC+TGG | + | chr1_4:16605559-16605578 | None:intergenic | 60.0% | |
CCAGCACACAGGTAGCAGAG+AGG | - | chr1_4:16605556-16605575 | Msa0153340:CDS | 60.0% | |
CCTTTGTCACCAGCCTGCAG+TGG | + | chr1_4:16605892-16605911 | None:intergenic | 60.0% | |
CCACTGCAGGCTGGTGACAA+AGG | - | chr1_4:16605889-16605908 | Msa0153340:CDS | 60.0% | |
AGAGGCGGAGGAGGAGAACG+AGG | + | chr1_4:16596525-16596544 | None:intergenic | 65.0% | |
! | GGAGGAGGAGGTGGTGGTTG+CGG | + | chr1_4:16596570-16596589 | None:intergenic | 65.0% |
GAAGGAGGAGGAGGAGGTGG+TGG | + | chr1_4:16596576-16596595 | None:intergenic | 65.0% | |
GACGAAGGAGGAGGAGGAGG+TGG | + | chr1_4:16596579-16596598 | None:intergenic | 65.0% | |
CTCCGACGGCGAAACCTGGA+CGG | - | chr1_4:16596703-16596722 | Msa0153340:CDS | 65.0% | |
CTCCGTCCAGGTTTCGCCGT+CGG | + | chr1_4:16596708-16596727 | None:intergenic | 65.0% | |
CTGTGTCGGACCCGGACACT+AGG | - | chr1_4:16597451-16597470 | Msa0153340:intron | 65.0% | |
GTAAGCGGTGGGGATGGGGA+GGG | + | chr1_4:16599172-16599191 | None:intergenic | 65.0% | |
CTGAGCGGAGCTGCAGTGGA+AGG | + | chr1_4:16599309-16599328 | None:intergenic | 65.0% | |
GTAGCAGGGAAAGGCGGGGA+TGG | + | chr1_4:16600250-16600269 | None:intergenic | 65.0% | |
GCACTGCCTACCTGCACACC+TGG | - | chr1_4:16600315-16600334 | Msa0153340:intron | 65.0% | |
GCCACTCCGTTCCGCTCTCT+GGG | - | chr1_4:16602831-16602850 | Msa0153340:intron | 65.0% | |
TCCCAGAGAGCGGAACGGAG+TGG | + | chr1_4:16602835-16602854 | None:intergenic | 65.0% | |
GGCGTAGGCGTAGGCGTAGG+TGG | + | chr1_4:16596352-16596371 | None:intergenic | 70.0% | |
! | GGAGGAGGTGGTGGTTGCGG+TGG | + | chr1_4:16596567-16596586 | None:intergenic | 70.0% |
GCTGCTCCGACGGCGAAACC+TGG | - | chr1_4:16596699-16596718 | Msa0153340:CDS | 70.0% | |
CGACGGCGAAACCTGGACGG+AGG | - | chr1_4:16596706-16596725 | Msa0153340:CDS | 70.0% | |
GGTAAGCGGTGGGGATGGGG+AGG | + | chr1_4:16599173-16599192 | None:intergenic | 70.0% | |
TGGGCTGAGCGGAGCTGCAG+TGG | + | chr1_4:16599313-16599332 | None:intergenic | 70.0% | |
GGCCACTCCGTTCCGCTCTC+TGG | - | chr1_4:16602830-16602849 | Msa0153340:intron | 70.0% | |
GGCGGCTGCTGCTGCTCCGA+CGG | - | chr1_4:16596689-16596708 | Msa0153340:CDS | 75.0% | |
AGCGGTGGGGATGGGGAGGG+CGG | + | chr1_4:16599169-16599188 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 16596259 | 16606402 | 16596259 | ID=Msa0153340;Name=Msa0153340 |
chr1_4 | mRNA | 16596259 | 16606402 | 16596259 | ID=Msa0153340-mRNA-1;Parent=Msa0153340;Name=Msa0153340-mRNA-1;_AED=0.14;_eAED=0.14;_QI=185|0.57|0.66|0.93|1|1|15|342|898 |
chr1_4 | exon | 16596259 | 16596763 | 16596259 | ID=Msa0153340-mRNA-1:exon:6408;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16596883 | 16597194 | 16596883 | ID=Msa0153340-mRNA-1:exon:6407;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16597779 | 16597841 | 16597779 | ID=Msa0153340-mRNA-1:exon:6406;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16599138 | 16599274 | 16599138 | ID=Msa0153340-mRNA-1:exon:6405;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16599377 | 16599454 | 16599377 | ID=Msa0153340-mRNA-1:exon:6404;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16601170 | 16601328 | 16601170 | ID=Msa0153340-mRNA-1:exon:6403;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16601443 | 16601616 | 16601443 | ID=Msa0153340-mRNA-1:exon:6402;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16601745 | 16602065 | 16601745 | ID=Msa0153340-mRNA-1:exon:6401;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16604061 | 16604241 | 16604061 | ID=Msa0153340-mRNA-1:exon:6400;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16604326 | 16604576 | 16604326 | ID=Msa0153340-mRNA-1:exon:6399;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16604668 | 16604708 | 16604668 | ID=Msa0153340-mRNA-1:exon:6398;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16604787 | 16604868 | 16604787 | ID=Msa0153340-mRNA-1:exon:6397;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16605055 | 16605134 | 16605055 | ID=Msa0153340-mRNA-1:exon:6396;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16605482 | 16605599 | 16605482 | ID=Msa0153340-mRNA-1:exon:6395;Parent=Msa0153340-mRNA-1 |
chr1_4 | exon | 16605681 | 16606402 | 16605681 | ID=Msa0153340-mRNA-1:exon:6394;Parent=Msa0153340-mRNA-1 |
chr1_4 | five_prime_UTR | 16606218 | 16606402 | 16606218 | ID=Msa0153340-mRNA-1:five_prime_utr;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16605681 | 16606217 | 16605681 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16605482 | 16605599 | 16605482 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16605055 | 16605134 | 16605055 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16604787 | 16604868 | 16604787 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16604668 | 16604708 | 16604668 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16604326 | 16604576 | 16604326 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16604061 | 16604241 | 16604061 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16601745 | 16602065 | 16601745 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16601443 | 16601616 | 16601443 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16601170 | 16601328 | 16601170 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16599377 | 16599454 | 16599377 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16599138 | 16599274 | 16599138 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16597779 | 16597841 | 16597779 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16596883 | 16597194 | 16596883 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | CDS | 16596601 | 16596763 | 16596601 | ID=Msa0153340-mRNA-1:cds;Parent=Msa0153340-mRNA-1 |
chr1_4 | three_prime_UTR | 16596259 | 16596600 | 16596259 | ID=Msa0153340-mRNA-1:three_prime_utr;Parent=Msa0153340-mRNA-1 |
Gene Sequence |
Protein sequence |