AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0394690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394690 MtrunA17_Chr3g0080351 98.551 828 10 1 1 828 1 826 0.0 1718
Msa0394690 MtrunA17_Chr1g0207551 50.620 806 352 8 51 828 7 794 0.0 790
Msa0394690 MtrunA17_Chr2g0329031 45.417 720 343 7 65 752 1 702 0.0 630
Msa0394690 MtrunA17_Chr5g0448761 35.127 669 378 11 70 698 52 704 7.23e-135 421
Msa0394690 MtrunA17_Chr1g0202341 32.331 665 394 11 41 675 27 665 1.30e-115 367
Msa0394690 MtrunA17_Chr2g0291581 34.776 624 362 10 78 675 71 675 4.55e-113 361
Msa0394690 MtrunA17_Chr2g0296781 35.417 576 324 8 82 627 1 558 8.66e-112 358
Msa0394690 MtrunA17_Chr5g0440451 32.722 654 351 11 77 677 42 659 1.08e-109 358
Msa0394690 MtrunA17_Chr5g0441581 32.736 614 368 11 77 664 31 625 3.85e-108 348
Msa0394690 MtrunA17_Chr6g0477261 39.855 414 241 3 221 627 35 447 2.71e-100 326
Msa0394690 MtrunA17_Chr1g0196541 33.333 597 347 6 82 648 1 576 4.35e-100 328
Msa0394690 MtrunA17_Chr3g0118611 35.699 465 289 5 226 686 107 565 8.20e-98 323
Msa0394690 MtrunA17_Chr5g0448511 34.961 512 317 7 233 735 7 511 6.24e-96 311
Msa0394690 MtrunA17_Chr2g0291591 31.176 510 309 5 77 562 63 554 2.52e-86 286
Msa0394690 MtrunA17_Chr2g0287061 30.547 622 365 14 76 677 181 755 1.91e-81 279
Msa0394690 MtrunA17_Chr3g0082121 29.302 645 407 15 61 677 24 647 9.32e-80 272
Msa0394690 MtrunA17_Chr1g0203721 28.754 626 402 5 81 675 66 678 2.13e-79 275
Msa0394690 MtrunA17_Chr8g0363841 29.655 580 351 11 81 625 20 577 1.52e-77 265
Msa0394690 MtrunA17_Chr2g0287651 29.276 649 392 17 82 690 79 700 7.11e-76 265
Msa0394690 MtrunA17_Chr6g0458391 27.549 559 378 6 78 626 225 766 2.48e-75 261
Msa0394690 MtrunA17_Chr2g0324011 26.891 595 393 8 69 635 1 581 3.03e-73 251
Msa0394690 MtrunA17_Chr1g0198761 29.530 596 358 18 81 638 50 621 5.74e-72 252
Msa0394690 MtrunA17_Chr1g0203051 29.116 577 348 15 70 612 72 621 1.80e-65 231
Msa0394690 MtrunA17_Chr2g0294841 27.558 606 382 13 56 620 14 603 4.12e-65 233
Msa0394690 MtrunA17_Chr2g0276841 27.883 581 359 18 78 622 70 626 7.16e-62 222
Msa0394690 MtrunA17_Chr5g0431001 30.275 436 251 11 78 476 61 480 2.04e-53 194
Msa0394690 MtrunA17_Chr2g0290391 25.970 593 364 16 76 623 49 611 9.09e-52 193
Msa0394690 MtrunA17_Chr1g0164591 30.820 305 190 6 174 460 7 308 1.40e-42 158
Msa0394690 MtrunA17_Chr7g0258861 27.393 303 181 7 69 345 1 290 5.39e-27 112
Msa0394690 MtrunA17_Chr2g0329361 34.146 123 70 1 76 198 59 170 2.87e-16 79.7
Msa0394690 MtrunA17_Chr3g0078041 34.127 126 71 1 77 202 49 162 2.14e-15 76.6
Msa0394690 MtrunA17_Chr2g0308841 24.255 235 168 4 401 629 1 231 1.08e-14 75.1
Msa0394690 MtrunA17_Chr1g0149131 27.273 132 86 2 346 477 1 122 6.16e-13 66.2
Msa0394690 MtrunA17_Chr4g0033611 27.027 185 102 5 56 240 55 206 1.32e-12 68.9
Msa0394690 MtrunA17_Chr7g0233911 32.520 123 57 2 77 192 33 136 1.44e-12 67.8
Msa0394690 MtrunA17_Chr2g0329421 31.405 121 69 2 77 197 26 132 5.13e-12 66.2
Msa0394690 MtrunA17_Chr3g0088371 27.044 159 92 5 588 726 1 155 5.06e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0394690 AT3G22170.2 62.380 832 298 8 1 828 1 821 0.0 1063
Msa0394690 AT3G22170.1 62.380 832 298 8 1 828 1 821 0.0 1063
Msa0394690 AT4G15090.1 47.967 836 373 12 29 828 1 810 0.0 791
Msa0394690 AT4G15090.5 47.967 836 373 12 29 828 1 810 0.0 791
Msa0394690 AT4G15090.3 47.967 836 373 12 29 828 1 810 0.0 791
Msa0394690 AT4G15090.2 47.967 836 373 12 29 828 1 810 0.0 791
Msa0394690 AT4G15090.4 47.967 836 373 12 29 828 1 810 0.0 791
Msa0394690 AT1G76320.1 45.581 645 315 4 82 708 1 627 0.0 598
Msa0394690 AT1G76320.4 45.581 645 315 4 82 708 1 627 0.0 598
Msa0394690 AT1G76320.2 45.581 645 315 4 82 708 1 627 0.0 598
Msa0394690 AT1G76320.3 45.581 645 315 4 82 708 1 627 0.0 597
Msa0394690 AT4G19990.3 43.941 751 358 11 75 813 18 717 0.0 553
Msa0394690 AT4G19990.4 43.941 751 358 11 75 813 18 717 0.0 553
Msa0394690 AT4G19990.5 43.941 751 358 11 75 813 18 717 0.0 552
Msa0394690 AT4G19990.7 43.079 773 374 12 53 813 13 731 0.0 552
Msa0394690 AT4G19990.6 43.941 751 358 11 75 813 18 717 0.0 551
Msa0394690 AT4G19990.2 43.941 751 358 11 75 813 18 717 0.0 551
Msa0394690 AT2G32250.5 41.057 738 398 6 80 816 40 741 0.0 540
Msa0394690 AT2G32250.2 41.057 738 398 6 80 816 40 741 2.80e-180 540
Msa0394690 AT2G32250.4 41.057 738 398 6 80 816 40 741 2.80e-180 540
Msa0394690 AT2G32250.6 41.057 738 398 6 80 816 40 741 3.14e-180 540
Msa0394690 AT2G32250.1 41.057 738 398 6 80 816 40 741 3.14e-180 540
Msa0394690 AT2G32250.3 41.057 738 398 6 80 816 40 741 3.14e-180 540
Msa0394690 AT2G32250.8 41.033 736 397 6 82 816 1 700 1.08e-179 537
Msa0394690 AT2G32250.7 41.033 736 397 6 82 816 1 700 1.12e-179 537
Msa0394690 AT4G19990.1 43.220 708 339 11 118 813 4 660 1.19e-168 506
Msa0394690 AT4G38180.1 33.838 727 419 10 75 757 70 778 5.25e-136 424
Msa0394690 AT2G27110.2 32.584 623 361 9 77 677 48 633 5.43e-105 344
Msa0394690 AT2G27110.1 32.584 623 361 9 77 677 48 633 5.43e-105 344
Msa0394690 AT1G80010.1 30.094 638 387 9 78 675 95 713 2.71e-99 326
Msa0394690 AT1G52520.1 32.909 629 369 15 78 675 85 691 4.23e-99 325
Msa0394690 AT2G27110.3 35.256 468 289 5 221 682 34 493 6.44e-95 313
Msa0394690 AT3G06250.2 29.247 677 423 14 18 677 121 758 7.99e-88 296
Msa0394690 AT3G06250.2 30.120 166 87 2 67 232 17 153 9.71e-11 66.2
Msa0394690 AT3G06250.1 29.247 677 423 14 18 677 121 758 7.99e-88 296
Msa0394690 AT3G06250.1 30.120 166 87 2 67 232 17 153 9.71e-11 66.2
Msa0394690 AT3G06250.3 29.247 677 423 14 18 677 121 758 7.99e-88 296
Msa0394690 AT3G06250.3 30.120 166 87 2 67 232 17 153 9.71e-11 66.2
Msa0394690 AT5G18960.2 30.569 615 383 11 71 677 204 782 2.19e-86 293
Msa0394690 AT5G18960.2 32.061 131 63 1 74 204 39 143 4.90e-11 67.0
Msa0394690 AT5G18960.1 30.569 615 383 11 71 677 204 782 2.19e-86 293
Msa0394690 AT5G18960.1 32.061 131 63 1 74 204 39 143 4.90e-11 67.0
Msa0394690 AT4G38170.1 33.404 473 293 8 245 708 21 480 9.09e-84 279
Msa0394690 AT1G10240.2 27.023 655 413 20 75 688 45 675 1.29e-66 236
Msa0394690 AT1G10240.1 27.023 655 413 20 75 688 45 675 1.29e-66 236
Msa0394690 AT5G28530.1 26.891 595 368 15 73 624 50 620 1.57e-56 207
Msa0394690 AT5G28530.3 26.622 601 358 16 73 624 50 616 4.35e-56 206
Msa0394690 AT5G28530.2 26.622 601 358 16 73 624 50 616 4.35e-56 206
Msa0394690 AT5G28530.4 26.344 558 355 17 73 624 50 557 8.88e-44 169
Msa0394690 AT5G28530.5 25.709 564 347 17 73 624 50 553 1.95e-43 167
Msa0394690 AT2G43280.1 29.050 179 110 3 59 232 3 169 4.61e-16 78.2
Msa0394690 AT3G59470.3 31.655 139 81 2 59 197 51 175 1.35e-15 78.2
Msa0394690 AT3G59470.1 31.655 139 81 2 59 197 51 175 1.35e-15 78.2
Msa0394690 AT3G59470.2 31.655 139 81 2 59 197 63 187 1.48e-15 78.2
Msa0394690 AT3G07500.1 34.074 135 69 3 76 208 31 147 4.80e-14 72.8
Msa0394690 AT4G12850.4 33.600 125 66 3 69 192 1 109 1.05e-12 66.6
Msa0394690 AT4G12850.2 33.621 116 61 2 77 192 10 109 1.56e-12 66.2
Msa0394690 AT4G12850.1 33.621 116 61 2 77 192 10 109 2.17e-12 67.0
Msa0394690 AT2G43280.2 28.276 145 87 3 93 232 2 134 9.19e-11 62.0

Find 199 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGATAAAGTTCGTAATT+TGG 0.150148 3_2:-9786753 Msa0394690:CDS
AGTTGATATTGCAATGTTTA+AGG 0.172219 3_2:-9787245 Msa0394690:CDS
ACAAATCTTGAGCCACTTTC+TGG 0.189659 3_2:-9787217 Msa0394690:CDS
CAATAGATGGGAGAAAATTT+TGG 0.200841 3_2:-9786183 Msa0394690:CDS
CACTACCAATTTATATTACT+TGG 0.214287 3_2:-9786491 Msa0394690:CDS
CGTAATTTGGGTCTGGAGTT+TGG 0.217600 3_2:-9786740 Msa0394690:CDS
GATTGTTCAGTTGAACTTAA+TGG 0.243913 3_2:-9784754 Msa0394690:intron
TTGGTGGTTCTTCAATATTC+TGG 0.244129 3_2:-9785639 Msa0394690:CDS
CTGGTTTCGCATACAGCATT+AGG 0.246092 3_2:-9784434 Msa0394690:CDS
AGATACCCAAAGTAGAAATA+TGG 0.254157 3_2:-9785322 Msa0394690:CDS
TATTTGCTTATGGCATATAC+TGG 0.255412 3_2:-9786309 Msa0394690:CDS
GTAATTTGGGTCTGGAGTTT+GGG 0.256919 3_2:-9786739 Msa0394690:CDS
TTCGATAAAGTTCGTAATTT+GGG 0.268268 3_2:-9786752 Msa0394690:CDS
CTTGCCATTGTATTTGCTTA+TGG 0.286247 3_2:-9786319 Msa0394690:CDS
CTTTCCCATATTTCTACTTT+GGG 0.301786 3_2:+9785317 None:intergenic
AAGTTTGCTTGTTCCAGATA+TGG 0.304206 3_2:-9787070 Msa0394690:CDS
TGGTCAGTAATTATCACTTT+TGG 0.304400 3_2:+9786386 None:intergenic
CCTTTAGAAAAGAGTGTTGC+AGG 0.305818 3_2:-9785882 Msa0394690:CDS
ATTGTTCAGTTGAACTTAAT+GGG 0.306375 3_2:-9784753 Msa0394690:intron
CCATTGATCGAGCATATTCT+TGG 0.307582 3_2:+9787155 None:intergenic
ACCAGCCACGATGGTTATTA+TGG 0.311286 3_2:-9784582 Msa0394690:CDS
AAGATCCAAGCTGAGATTAT+TGG 0.311613 3_2:-9785834 Msa0394690:CDS
CACACCCAAGTAATATAAAT+TGG 0.315083 3_2:+9786486 None:intergenic
TTGTTTGTTCACTTACTGCC+TGG 0.318808 3_2:+9786852 None:intergenic
TGTCGGCTATTTGAATATAA+AGG 0.333196 3_2:-9785681 Msa0394690:CDS
TCATCCTGCCTGTCAAGTTT+AGG 0.337518 3_2:+9785795 None:intergenic
TGTTCACAGGGTGCATGATA+TGG 0.338272 3_2:-9785763 Msa0394690:CDS
TCAAAACTTGCAGGCACAAC+TGG 0.340078 3_2:-9784469 Msa0394690:intron
TGTATGAGCGTGAGATGGTT+AGG 0.342964 3_2:+9792463 None:intergenic
ACTTTCCCATATTTCTACTT+TGG 0.350583 3_2:+9785316 None:intergenic
CAACTGGATTTCTTGCGAAC+TGG 0.365489 3_2:-9784453 Msa0394690:CDS
CCTACAGAAGCTGGTACATC+AGG 0.374818 3_2:-9785372 Msa0394690:CDS
GTAACCCTCGAAGGTTATTA+TGG 0.378451 3_2:-9784885 Msa0394690:CDS
AAAGAAGGCAAGATGGGAAA+TGG 0.381396 3_2:-9786922 Msa0394690:CDS
AAAGTGCCGCAACATATTCT+TGG 0.383004 3_2:-9786448 Msa0394690:CDS
GGATCTTCTTGAATACTGTA+TGG 0.385556 3_2:+9785850 None:intergenic
CCATGACATGACTTTGAAAT+CGG 0.385564 3_2:-9786366 Msa0394690:CDS
TTCATGAAGGATGTGTTCTT+AGG 0.388405 3_2:-9786089 Msa0394690:CDS
ATATTACAAAATACTGGCCT+TGG 0.392792 3_2:+9783746 None:intergenic
CTTATATTTGTTTCTAACAT+AGG 0.395042 3_2:+9786547 None:intergenic
TCTTTGACAAATATGTTCAT+AGG 0.403324 3_2:-9786025 Msa0394690:CDS
AGGCAGAAGTGATGAATGTT+GGG 0.408722 3_2:-9785176 Msa0394690:CDS
ATAACCTCAATTGGCCTTTG+AGG 0.409300 3_2:+9783781 None:intergenic
AAGAAGGCAAGATGGGAAAT+GGG 0.409702 3_2:-9786921 Msa0394690:CDS
TGGTTTCGCATACAGCATTA+GGG 0.419366 3_2:-9784433 Msa0394690:intron
ACAGTATGAAACCATCTTGC+AGG 0.419590 3_2:-9785976 Msa0394690:CDS
TCGAGCTCGTGGTCGGTTGA+AGG 0.420065 3_2:+9787024 None:intergenic
TGTATGAAGATCGCAAGTTA+TGG 0.424995 3_2:-9786121 Msa0394690:CDS
ATTGAGGTACATGCTCTAAA+TGG 0.425596 3_2:-9787289 Msa0394690:CDS
ACTTTGGGTATCTTCTTCAA+TGG 0.429012 3_2:+9785332 None:intergenic
CCAAGAATATGCTCGATCAA+TGG 0.430685 3_2:-9787155 Msa0394690:CDS
TTTGCCAACATAACCTCAAT+TGG 0.432367 3_2:+9783772 None:intergenic
GTATGAAGATCGCAAGTTAT+GGG 0.435215 3_2:-9786120 Msa0394690:CDS
ACATCAAAGCATGCCTGGTT+TGG 0.435777 3_2:-9784556 Msa0394690:intron
CAAAAGCAGATTCTGATACT+TGG 0.440513 3_2:-9785935 Msa0394690:CDS
GATACCCAAAGTAGAAATAT+GGG 0.442097 3_2:-9785321 Msa0394690:CDS
CAAGAATATGCTCGATCAAT+GGG 0.442288 3_2:-9787154 Msa0394690:CDS
GTAATATAAATTGGTAGTGC+TGG 0.445832 3_2:+9786495 None:intergenic
CTGGTTGGTATGGAATTCAT+TGG 0.446970 3_2:+9784600 None:intergenic
AATTGACACTTTCAGATCGT+TGG 0.447716 3_2:+9786051 None:intergenic
TAAAGTTCGTAATTTGGGTC+TGG 0.453859 3_2:-9786747 Msa0394690:CDS
CAAGAATCTGAAAATTCAAC+TGG 0.454460 3_2:-9786992 Msa0394690:CDS
TCTTGAGCCACTTTCTGGTA+TGG 0.454926 3_2:-9787212 Msa0394690:CDS
TGTGGAAGAGGAGAGATTAG+AGG 0.459305 3_2:+9792424 None:intergenic
ACCATCGTGGCTGGTTGGTA+TGG 0.463080 3_2:+9784590 None:intergenic
ATGAAACCATCTTGCAGGAC+AGG 0.466060 3_2:-9785971 Msa0394690:CDS
AAAAGATGAAGAGAGAGGAT+TGG 0.466433 3_2:-9792517 Msa0394690:five_prime_UTR
GGGAATCAACAGACTCTTCA+AGG 0.466578 3_2:-9784708 Msa0394690:CDS
GAGGCAGAAGTGATGAATGT+TGG 0.469181 3_2:-9785177 Msa0394690:CDS
TATGGATTGATGCTAAAAGT+AGG 0.472928 3_2:-9786613 Msa0394690:CDS
GGCACTTTCATCTGATATCA+AGG 0.474717 3_2:+9786463 None:intergenic
TGTTTGTTCACTTACTGCCT+GGG 0.477529 3_2:+9786853 None:intergenic
GTATGAGCGTGAGATGGTTA+GGG 0.479791 3_2:+9792464 None:intergenic
TTCATACCTGTCCTGCAAGA+TGG 0.481351 3_2:+9785965 None:intergenic
TGTTCACTTACTGCCTGGGC+TGG 0.481371 3_2:+9786857 None:intergenic
TTTGTATTCTGCAAACTGCC+TGG 0.482219 3_2:+9786808 None:intergenic
ATGAGACAAACGTTGTTCAC+AGG 0.483821 3_2:-9785776 Msa0394690:CDS
GGATAGATTTGAGCTTCGAC+AGG 0.484930 3_2:-9786162 Msa0394690:CDS
TTCTTTCTCATGTTCACCAG+TGG 0.488199 3_2:+9787414 None:intergenic
GATCTTCTTGAATACTGTAT+GGG 0.490261 3_2:+9785851 None:intergenic
ATGAACATATTTGTCAAAGA+AGG 0.490350 3_2:+9786028 None:intergenic
ATTGACACTTTCAGATCGTT+GGG 0.494400 3_2:+9786052 None:intergenic
ATTTGCTTATGGCATATACT+GGG 0.495990 3_2:-9786308 Msa0394690:CDS
ATTGAAGATGGTGGTGGTGT+TGG 0.499910 3_2:+9792378 None:intergenic
AGTTTGAGAAATGCATATAT+AGG 0.501978 3_2:-9786229 Msa0394690:CDS
GGACAAAAGATGCAAAAGTC+AGG 0.504861 3_2:-9785578 Msa0394690:CDS
AATCTGAACATATGCTGGCT+AGG 0.505661 3_2:-9785539 Msa0394690:CDS
TCTTTCTCATGTTCACCAGT+GGG 0.508767 3_2:+9787415 None:intergenic
TGGTGCGCAACAGAGTGTGC+AGG 0.511496 3_2:-9784865 Msa0394690:CDS
CGTTTCAAAACATATTGAGA+TGG 0.511948 3_2:+9785603 None:intergenic
CAAATACAATGGCAAGCACT+AGG 0.512004 3_2:+9786326 None:intergenic
AGAAGAATCTGAACATATGC+TGG 0.512248 3_2:-9785544 Msa0394690:CDS
AACAGAAAGTGGTGTGGAAG+AGG 0.513071 3_2:+9792412 None:intergenic
GTATGGAATTCGAGTCTCAT+GGG 0.513881 3_2:-9787195 Msa0394690:CDS
AGCAAGAGTCCTACAGAAGC+TGG 0.514473 3_2:-9785381 Msa0394690:CDS
AAATTACGAACTTTATCGAA+TGG 0.514738 3_2:+9786755 None:intergenic
AACATTGCAATATCAACTGT+GGG 0.516629 3_2:+9787250 None:intergenic
ACTAGACAACATGCAACAAA+TGG 0.519807 3_2:-9785151 Msa0394690:intron
GAATGTATGCTGTGATGGCC+AGG 0.523831 3_2:-9786826 Msa0394690:CDS
TTATCTTTGTCGACATGCAT+TGG 0.525970 3_2:-9785658 Msa0394690:CDS
GGTATGGAATTCGAGTCTCA+TGG 0.526936 3_2:-9787196 Msa0394690:CDS
ATTGAGATGGGAACACTGAA+TGG 0.527069 3_2:+9785616 None:intergenic
GGTGCACATCAAAGCATGCC+TGG 0.527959 3_2:-9784561 Msa0394690:CDS
AAAATTGCACAATGGAGGTA+TGG 0.528216 3_2:-9787338 Msa0394690:CDS
GTTTCAAAACATATTGAGAT+GGG 0.529334 3_2:+9785604 None:intergenic
CTTGTCATCCTAAACTTGAC+AGG 0.529447 3_2:-9785803 Msa0394690:CDS
ACTACCAATTTATATTACTT+GGG 0.533065 3_2:-9786490 Msa0394690:CDS
TGTTGGATTGTAGGTGAACT+CGG 0.535610 3_2:-9785199 Msa0394690:intron
TCATCCTAAACTTGACAGGC+AGG 0.538131 3_2:-9785799 Msa0394690:CDS
GCAGAATACAAAACTGTGGT+TGG 0.538665 3_2:-9786797 Msa0394690:CDS
TGCATTCCATGCACTAAATG+AGG 0.540583 3_2:-9785436 Msa0394690:CDS
AGGTATGGACGACAGACATA+TGG 0.540778 3_2:-9787323 Msa0394690:CDS
AAAGCAAGTTGTTCTCATCA+TGG 0.542361 3_2:-9787455 Msa0394690:exon
TCATCATGGATATAGATCTC+AGG 0.543112 3_2:-9787441 Msa0394690:exon
GCTGGTACATCAGGGGCTCA+TGG 0.543275 3_2:-9785363 Msa0394690:CDS
TCTTTGTCGACATGCATTGG+TGG 0.544560 3_2:-9785655 Msa0394690:CDS
TTCTGATACTTGGAATAAAG+TGG 0.545659 3_2:-9785925 Msa0394690:CDS
AAGGCCAATTGAGGTTATGT+TGG 0.545679 3_2:-9783776 Msa0394690:CDS
ATCTGAACATATGCTGGCTA+GGG 0.545736 3_2:-9785538 Msa0394690:CDS
ATGTATAGGCTAGGAAAATG+AGG 0.546125 3_2:-9783840 Msa0394690:intron
AACACATCCTTCATGAATGT+TGG 0.546900 3_2:+9786095 None:intergenic
AGCTGAGATTATTGGTGCAG+TGG 0.546997 3_2:-9785826 Msa0394690:CDS
CCAACACGTGATGATTACTA+CGG 0.549419 3_2:-9784729 Msa0394690:CDS
GCGCACCATAATAACCTTCG+AGG 0.551435 3_2:+9784880 None:intergenic
TGCATCTATAAATTCTCTTG+AGG 0.551832 3_2:+9787093 None:intergenic
CTTATGGCATATACTGGGGA+AGG 0.554219 3_2:-9786303 Msa0394690:CDS
ACCATAATAACCATCGTGGC+TGG 0.555757 3_2:+9784581 None:intergenic
ATATTAATATAGGTGGGGTA+AGG 0.557263 3_2:-9783654 Msa0394690:intron
TGCTCATCTGATGTAGAGAA+TGG 0.557881 3_2:-9783808 Msa0394690:CDS
TGCTTGTTCTGTCGAGCTCG+TGG 0.562836 3_2:+9787013 None:intergenic
TAGATCTTGGTGAGGATCAA+CGG 0.563870 3_2:-9786649 Msa0394690:CDS
TCGAATTCCATACCAGAAAG+TGG 0.566016 3_2:+9787205 None:intergenic
TGTGTGCCTCATTTAGTGCA+TGG 0.566180 3_2:+9785430 None:intergenic
ATGAAGGATGTGTTCTTAGG+TGG 0.566472 3_2:-9786086 Msa0394690:CDS
TCACTAAAATTGAGCGAAGA+GGG 0.566685 3_2:-9785486 Msa0394690:CDS
GGTTATTCATAGCTTTGTGA+AGG 0.566920 3_2:-9786900 Msa0394690:CDS
GACAGACATATGGTTGAAGC+TGG 0.568268 3_2:-9787313 Msa0394690:CDS
TTTGGGTCTGGAGTTTGGGG+AGG 0.569035 3_2:-9786735 Msa0394690:CDS
CTATTACAGACATGGCTGAA+AGG 0.571735 3_2:-9786425 Msa0394690:CDS
TGTTCTGTCGAGCTCGTGGT+CGG 0.571836 3_2:+9787017 None:intergenic
TTTAACAAAATCTTGCACAT+AGG 0.572860 3_2:+9785998 None:intergenic
GCAACAGAGTGTGCAGGGAA+TGG 0.572934 3_2:-9784859 Msa0394690:intron
TATGGTTGAAGCTGGTATTG+AGG 0.573490 3_2:-9787305 Msa0394690:CDS
AAATAAATGAAAATTGAAGA+TGG 0.574187 3_2:+9792366 None:intergenic
CTGCACCAATAATCTCAGCT+TGG 0.574589 3_2:+9785829 None:intergenic
AACTGCACTTGATAACATGT+TGG 0.582042 3_2:-9787371 Msa0394690:CDS
CTACAGAAGCTGGTACATCA+GGG 0.582637 3_2:-9785371 Msa0394690:CDS
CTTTAGAAAAGAGTGTTGCA+GGG 0.584026 3_2:-9785881 Msa0394690:CDS
CAGAGGTGTCTTGTATATGT+CGG 0.585513 3_2:-9785698 Msa0394690:CDS
CGAGGTGTATGAGCGTGAGA+TGG 0.586923 3_2:+9792458 None:intergenic
AATACCTCAAAGGCCAATTG+AGG 0.588428 3_2:-9783785 Msa0394690:CDS
AAGAAGAATGTATGCTGTGA+TGG 0.589551 3_2:-9786831 Msa0394690:CDS
AAACATTGCAATATCAACTG+TGG 0.593917 3_2:+9787249 None:intergenic
TAATTTGGGTCTGGAGTTTG+GGG 0.596349 3_2:-9786738 Msa0394690:CDS
GGTGCGCAACAGAGTGTGCA+GGG 0.598023 3_2:-9784864 Msa0394690:CDS
ATGAAAATTGAAGATGGTGG+TGG 0.599899 3_2:+9792372 None:intergenic
CCGATTTCAAAGTCATGTCA+TGG 0.600152 3_2:+9786366 None:intergenic
CAACACGTGATGATTACTAC+GGG 0.600808 3_2:-9784728 Msa0394690:CDS
TGAGACAAACGTTGTTCACA+GGG 0.601018 3_2:-9785775 Msa0394690:CDS
CAGACATGGCTGAAAGGTGT+AGG 0.601180 3_2:-9786419 Msa0394690:CDS
TGCAAAAGTCAGGAATGTCA+CGG 0.602820 3_2:-9785568 Msa0394690:CDS
GCAAAAGTCAGGAATGTCAC+GGG 0.606359 3_2:-9785567 Msa0394690:CDS
TAATAACCATCGTGGCTGGT+TGG 0.607504 3_2:+9784585 None:intergenic
CCTGATGTACCAGCTTCTGT+AGG 0.610024 3_2:+9785372 None:intergenic
TGATGATCTGCAACAGAAAG+TGG 0.612810 3_2:+9792401 None:intergenic
GCAGGACAGGTATGAAGAGG+AGG 0.615423 3_2:-9785958 Msa0394690:CDS
CGCACCATAATAACCTTCGA+GGG 0.615700 3_2:+9784881 None:intergenic
GAGGTACATGCTCTAAATGG+TGG 0.620892 3_2:-9787286 Msa0394690:CDS
CATTGCAATATCAACTGTGG+GGG 0.621147 3_2:+9787252 None:intergenic
ATCACTAAAATTGAGCGAAG+AGG 0.621826 3_2:-9785487 Msa0394690:CDS
GGTGAATGAAGTAAAATCAG+AGG 0.623034 3_2:-9785715 Msa0394690:CDS
AACAAAACAATCTCTACATG+AGG 0.623988 3_2:+9783618 None:intergenic
ATGGGCACCAACATTCATGA+AGG 0.624807 3_2:-9786102 Msa0394690:CDS
ATTCTTGGCTATTACAGACA+TGG 0.625085 3_2:-9786433 Msa0394690:CDS
TTATGCAGTAGATCTTGGTG+AGG 0.626878 3_2:-9786657 Msa0394690:CDS
ATAGATCTCAGGTTACCCAC+TGG 0.627040 3_2:-9787430 Msa0394690:CDS
CTTGCAGGACAGGTATGAAG+AGG 0.628672 3_2:-9785961 Msa0394690:CDS
TAGAGAATGGAATACCTCAA+AGG 0.631467 3_2:-9783795 Msa0394690:CDS
GCAAGAAAAGATGAAGAGAG+AGG 0.634014 3_2:-9792522 Msa0394690:five_prime_UTR
TCCATACCAACCAGCCACGA+TGG 0.638953 3_2:-9784591 Msa0394690:CDS
GTTATGTTGGCAAATCTCCA+AGG 0.640046 3_2:-9783763 Msa0394690:CDS
CCGTAGTAATCATCACGTGT+TGG 0.653378 3_2:+9784729 None:intergenic
ATCTGCAACAGAAAGTGGTG+TGG 0.655770 3_2:+9792406 None:intergenic
TTAGTGAAACATACCAAACC+AGG 0.659731 3_2:+9784543 None:intergenic
TTTGCTTATGGCATATACTG+GGG 0.662956 3_2:-9786307 Msa0394690:CDS
GGCAGAAGTGATGAATGTTG+GGG 0.664453 3_2:-9785175 Msa0394690:CDS
ACATGGCTGAAAGGTGTAGG+TGG 0.667199 3_2:-9786416 Msa0394690:CDS
TACAGAAGCTGGTACATCAG+GGG 0.668012 3_2:-9785370 Msa0394690:CDS
TATGCCATAAGCAAATACAA+TGG 0.671446 3_2:+9786315 None:intergenic
AGAACTGCAGTAACCCTCGA+AGG 0.680930 3_2:-9784894 Msa0394690:CDS
TATGGAATTCGAGTCTCATG+GGG 0.685488 3_2:-9787194 Msa0394690:CDS
TTAGAGGAAGAGTTCACGCG+AGG 0.686398 3_2:+9792440 None:intergenic
TAAATGAAAATTGAAGATGG+TGG 0.687501 3_2:+9792369 None:intergenic
GCACTTGATAACATGTTGGA+AGG 0.688444 3_2:-9787367 Msa0394690:CDS
TAATAGCCAAGAATATGTTG+CGG 0.691526 3_2:+9786442 None:intergenic
ACATTGCAATATCAACTGTG+GGG 0.697658 3_2:+9787251 None:intergenic
GTTTGCAGAATACAAAACTG+TGG 0.699066 3_2:-9786801 Msa0394690:CDS
TGGATTGTAGGTGAACTCGG+AGG 0.756855 3_2:-9785196 Msa0394690:intron
GTGCACCATAATAACCATCG+TGG 0.809451 3_2:+9784577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTAATTTTTTTT+AGG - chr3_2:9783863-9783882 Msa0394690:intron 0.0%
!! AATATTTATAATATTAATAT+AGG - chr3_2:9792491-9792510 Msa0394690:five_prime_UTR 0.0%
!! TAAAATAAAAAACAAATCTA+AGG + chr3_2:9783854-9783873 None:intergenic 10.0%
!! AAAATAAAAAACAAATAGTT+TGG + chr3_2:9786032-9786051 None:intergenic 10.0%
!!! AACTATTTGTTTTTTATTTT+TGG - chr3_2:9786032-9786051 Msa0394690:CDS 10.0%
!!! TAAAAAAAATGAGAATTTTA+TGG - chr3_2:9789900-9789919 Msa0394690:intron 10.0%
!! ATTTATAATATTAATATAGG+TGG - chr3_2:9792494-9792513 Msa0394690:five_prime_UTR 10.0%
!! TTTATAATATTAATATAGGT+GGG - chr3_2:9792495-9792514 Msa0394690:five_prime_UTR 10.0%
!! AAATAAATGAAAATTGAAGA+TGG + chr3_2:9783792-9783811 None:intergenic 15.0%
!! AATTATTATCCATTATAAGT+TGG - chr3_2:9783900-9783919 Msa0394690:intron 15.0%
!! ACAAAAAAATTGTTTAATTC+AGG - chr3_2:9784076-9784095 Msa0394690:intron 15.0%
!!! TTTTTTTTCATAGATATAAC+TGG - chr3_2:9786175-9786194 Msa0394690:CDS 15.0%
!! TTGATTAATATCATATAGAA+GGG + chr3_2:9786294-9786313 None:intergenic 15.0%
!! TTTGATTAATATCATATAGA+AGG + chr3_2:9786295-9786314 None:intergenic 15.0%
!!! TCTAATTTTATTTAAGCTAA+CGG - chr3_2:9786328-9786347 Msa0394690:CDS 15.0%
!! AAATAATATATCATTGAAGT+GGG + chr3_2:9787311-9787330 None:intergenic 15.0%
!!! AATATACTTTTACTATCAAT+TGG - chr3_2:9787858-9787877 Msa0394690:intron 15.0%
!!! TATTAAGATCTAGAATTAAA+TGG + chr3_2:9788150-9788169 None:intergenic 15.0%
!!! TTCTCATTTTTTTTAATTAC+AGG + chr3_2:9789895-9789914 None:intergenic 15.0%
!! AAATAAAAATAAAATCCTCT+AGG + chr3_2:9791174-9791193 None:intergenic 15.0%
!! TCACTATATACATTAAATTA+AGG - chr3_2:9792172-9792191 Msa0394690:intron 15.0%
!!! TCACATTATTTTAAATGTAT+AGG - chr3_2:9792301-9792320 Msa0394690:intron 15.0%
!! GCTGTTATATTAATAAATAT+AGG - chr3_2:9792435-9792454 Msa0394690:five_prime_UTR 15.0%
!! TTATAATATTAATATAGGTG+GGG - chr3_2:9792496-9792515 Msa0394690:five_prime_UTR 15.0%
!!! ATTTTCATTTATTTTCTCTC+AGG - chr3_2:9783798-9783817 Msa0394690:CDS 20.0%
!! AACAAAACTAAACTTCATTA+TGG + chr3_2:9783949-9783968 None:intergenic 20.0%
!!! TTTATATGATGTTAACCTTT+TGG - chr3_2:9784001-9784020 Msa0394690:intron 20.0%
!! TATGAACAATTTGTATATAG+TGG - chr3_2:9784116-9784135 Msa0394690:intron 20.0%
!!! TTTTTGCTTATAATATTGAC+AGG + chr3_2:9784274-9784293 None:intergenic 20.0%
!! ATTAAATGAACCTAAAATGT+AGG + chr3_2:9784297-9784316 None:intergenic 20.0%
!! CATTCATTAAATTATGTATG+TGG + chr3_2:9784369-9784388 None:intergenic 20.0%
!!! TTTAGGTTTTATTGAAATTG+CGG - chr3_2:9785152-9785171 Msa0394690:CDS 20.0%
!! GATTTAATAGAATTTCGATA+TGG - chr3_2:9785241-9785260 Msa0394690:intron 20.0%
!!! TTAATTTTTCAGTTTCGAAT+TGG - chr3_2:9785394-9785413 Msa0394690:CDS 20.0%
!! TTATTTATTATAGCACAAGT+TGG - chr3_2:9786055-9786074 Msa0394690:CDS 20.0%
!!! TCAATATGAATGAATTTTTG+TGG - chr3_2:9786718-9786737 Msa0394690:CDS 20.0%
!!! GTTTTGCTAAATGATAATAA+TGG - chr3_2:9786940-9786959 Msa0394690:CDS 20.0%
!! GAAATAATATATCATTGAAG+TGG + chr3_2:9787312-9787331 None:intergenic 20.0%
!! ATCAGAACTAAAAAAAGAAT+GGG - chr3_2:9787772-9787791 Msa0394690:intron 20.0%
!! TTTCAACAGTATATATTGAT+TGG - chr3_2:9787922-9787941 Msa0394690:intron 20.0%
!!! TTTGATTGGTCTAAATAAAT+AGG - chr3_2:9787997-9788016 Msa0394690:intron 20.0%
!!! AATAGGTATTGATTTTGAAA+AGG - chr3_2:9788014-9788033 Msa0394690:intron 20.0%
!!! ATAGGTATTGATTTTGAAAA+GGG - chr3_2:9788015-9788034 Msa0394690:intron 20.0%
!!! GAATTTTAATGTAAAACGAA+AGG + chr3_2:9788607-9788626 None:intergenic 20.0%
!!! CTTATATTTGTTTCTAACAT+AGG + chr3_2:9789611-9789630 None:intergenic 20.0%
!! ACTACCAATTTATATTACTT+GGG - chr3_2:9789665-9789684 Msa0394690:intron 20.0%
!!! GTTTTTTTTAACTAGATATG+AGG + chr3_2:9791115-9791134 None:intergenic 20.0%
!!! TATAATGGTAATTTTTCGAA+CGG + chr3_2:9791784-9791803 None:intergenic 20.0%
!!! GATCAAAGATTTAATTTTTC+AGG + chr3_2:9791870-9791889 None:intergenic 20.0%
!!! ATTTAGTTTACAAGATTGTA+GGG + chr3_2:9792017-9792036 None:intergenic 20.0%
!!! AATTTAGTTTACAAGATTGT+AGG + chr3_2:9792018-9792037 None:intergenic 20.0%
!!! TTATTTTAAATGTATAGGCT+AGG - chr3_2:9792306-9792325 Msa0394690:intron 20.0%
!! AGCATTATATTACAAAATAC+TGG + chr3_2:9792418-9792437 None:intergenic 20.0%
! TAAATGAAAATTGAAGATGG+TGG + chr3_2:9783789-9783808 None:intergenic 25.0%
! AAAAGTAAGTGTGAAATTGA+AGG + chr3_2:9783826-9783845 None:intergenic 25.0%
! AAGCATATTCCAACTTATAA+TGG + chr3_2:9783912-9783931 None:intergenic 25.0%
! TATAAATAAATGAGCTGCAT+TGG + chr3_2:9784152-9784171 None:intergenic 25.0%
!! TAAGCAAAAACCTACATTTT+AGG - chr3_2:9784284-9784303 Msa0394690:intron 25.0%
! GGTTCATTAAATTATGTATG+TGG + chr3_2:9784348-9784367 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr3_2:9784408-9784427 Msa0394690:intron 25.0%
!! ATACAAAGTTTGTCGATTAT+CGG - chr3_2:9784508-9784527 Msa0394690:intron 25.0%
!! ATACAAAGTTTGTCGATTAT+CGG - chr3_2:9784508-9784527 Msa0394690:intron 25.0%
!!! TTGTTGAAGCTTTAAAGTTT+AGG - chr3_2:9784729-9784748 Msa0394690:CDS 25.0%
!!! TACAAAGTTTTGTCGAATAT+CGG - chr3_2:9784778-9784797 Msa0394690:intron 25.0%
!!! TTGTTGAAGCTTTAAAGTTT+AGG - chr3_2:9784729-9784748 Msa0394690:CDS 25.0%
!!! TACAAAGTTTTGTCGAATAT+CGG - chr3_2:9784778-9784797 Msa0394690:intron 25.0%
!! TTGTTGAAGCATTAAAGTTT+AGG - chr3_2:9785135-9785154 Msa0394690:intron 25.0%
! ATTCAAATTGACGATAAACT+TGG + chr3_2:9785191-9785210 None:intergenic 25.0%
! TTTCGAATTGGAATTTAGAT+AGG - chr3_2:9785406-9785425 Msa0394690:CDS 25.0%
!! TTTGTTTGATTTCAGAAAAC+AGG - chr3_2:9785449-9785468 Msa0394690:CDS 25.0%
! TATTAATAGATCTGGATCTA+GGG + chr3_2:9785787-9785806 None:intergenic 25.0%
! TTATTAATAGATCTGGATCT+AGG + chr3_2:9785788-9785807 None:intergenic 25.0%
! TCCAGATCTATTAATAATGT+TGG - chr3_2:9785791-9785810 Msa0394690:CDS 25.0%
! TCCAACATTATTAATAGATC+TGG + chr3_2:9785795-9785814 None:intergenic 25.0%
!! GAATCTAGAATAAAGTCTTA+TGG - chr3_2:9786442-9786461 Msa0394690:CDS 25.0%
! ATAACATGATACTACAATAC+AGG + chr3_2:9786527-9786546 None:intergenic 25.0%
! AAAGAGATATATTCAACCAA+AGG + chr3_2:9786746-9786765 None:intergenic 25.0%
!!! AAGCGTTTGAATTTTTAGAA+AGG - chr3_2:9786991-9787010 Msa0394690:CDS 25.0%
!!! AGCGTTTGAATTTTTAGAAA+GGG - chr3_2:9786992-9787011 Msa0394690:CDS 25.0%
! GTGATTAAATAAAGCATGTT+TGG + chr3_2:9787100-9787119 None:intergenic 25.0%
!! TCATTCTGTTTATCCATTTT+AGG - chr3_2:9787211-9787230 Msa0394690:CDS 25.0%
! TAGACAAAAAGAAAATTGGA+GGG + chr3_2:9787269-9787288 None:intergenic 25.0%
! TACCTAGACAAAAAGAAAAT+TGG + chr3_2:9787273-9787292 None:intergenic 25.0%
!! AATTTTCTTTTTGTCTAGGT+AGG - chr3_2:9787272-9787291 Msa0394690:CDS 25.0%
!! ATTTTCTTTTTGTCTAGGTA+GGG - chr3_2:9787273-9787292 Msa0394690:CDS 25.0%
! TGAATTTAGCATGTGATTTA+TGG - chr3_2:9787364-9787383 Msa0394690:CDS 25.0%
!! TTTCTAAAAACTGTCAATGT+TGG - chr3_2:9787388-9787407 Msa0394690:CDS 25.0%
! TGTTTAATTGTGCAATTCAA+TGG - chr3_2:9787615-9787634 Msa0394690:intron 25.0%
! TACATTAGACAATGTAATCA+TGG - chr3_2:9787692-9787711 Msa0394690:intron 25.0%
!!! CATTCTTTTTTTAGTTCTGA+TGG + chr3_2:9787773-9787792 None:intergenic 25.0%
! CATCAGAACTAAAAAAAGAA+TGG - chr3_2:9787771-9787790 Msa0394690:intron 25.0%
!!! AGGAAACAGTATATTTTGAT+TGG - chr3_2:9787983-9788002 Msa0394690:intron 25.0%
!!! TAGGTATTGATTTTGAAAAG+GGG - chr3_2:9788016-9788035 Msa0394690:intron 25.0%
! AATGTAAAATTGTAAACCAG+AGG + chr3_2:9788379-9788398 None:intergenic 25.0%
!! TTACAATTTTACATTTTCCC+CGG - chr3_2:9788384-9788403 Msa0394690:intron 25.0%
!! TTTTAATGTAAAACGAAAGG+TGG + chr3_2:9788604-9788623 None:intergenic 25.0%
!!! ACTTGCTTTGATGATTTTAA+GGG + chr3_2:9788689-9788708 None:intergenic 25.0%
!!! AACTTGCTTTGATGATTTTA+AGG + chr3_2:9788690-9788709 None:intergenic 25.0%
!! AGTTGATATTGCAATGTTTA+AGG - chr3_2:9788910-9788929 Msa0394690:intron 25.0%
! AAATTACGAACTTTATCGAA+TGG + chr3_2:9789403-9789422 None:intergenic 25.0%
! ATTCGATAAAGTTCGTAATT+TGG - chr3_2:9789402-9789421 Msa0394690:intron 25.0%
! TTCGATAAAGTTCGTAATTT+GGG - chr3_2:9789403-9789422 Msa0394690:intron 25.0%
! CACTACCAATTTATATTACT+TGG - chr3_2:9789664-9789683 Msa0394690:intron 25.0%
! AGTTTGAGAAATGCATATAT+AGG - chr3_2:9789926-9789945 Msa0394690:intron 25.0%
!!! TGATGATTTTGACAATAGAT+GGG - chr3_2:9789960-9789979 Msa0394690:intron 25.0%
! ATGAACATATTTGTCAAAGA+AGG + chr3_2:9790130-9790149 None:intergenic 25.0%
! TCTTTGACAAATATGTTCAT+AGG - chr3_2:9790130-9790149 Msa0394690:intron 25.0%
! TTTAACAAAATCTTGCACAT+AGG + chr3_2:9790160-9790179 None:intergenic 25.0%
! GTTTCAAAACATATTGAGAT+GGG + chr3_2:9790554-9790573 None:intergenic 25.0%
! GAATCCAACTAAAAAGAAAA+AGG - chr3_2:9790875-9790894 Msa0394690:intron 25.0%
!!! CAAACCTTTTTCTTTTTAGT+TGG + chr3_2:9790882-9790901 None:intergenic 25.0%
! ATATGATCAAACACTTTGAT+AGG + chr3_2:9791055-9791074 None:intergenic 25.0%
!! AGTGTTTGATCATATACTTT+TGG - chr3_2:9791060-9791079 Msa0394690:intron 25.0%
! AAAAACAATACAAGACTTGT+TGG - chr3_2:9791129-9791148 Msa0394690:intron 25.0%
!!! ATTTTTTATCAAGCATGAAG+TGG - chr3_2:9791190-9791209 Msa0394690:intron 25.0%
!!! TTTTTTATCAAGCATGAAGT+GGG - chr3_2:9791191-9791210 Msa0394690:intron 25.0%
!! TTAAAAGGAACTTCTTTTGT+AGG - chr3_2:9791224-9791243 Msa0394690:intron 25.0%
! ATTGTTCAGTTGAACTTAAT+GGG - chr3_2:9791402-9791421 Msa0394690:intron 25.0%
!! ACAAACTATTTTATGTGTGT+AGG - chr3_2:9791530-9791549 Msa0394690:intron 25.0%
!! CAAACTATTTTATGTGTGTA+GGG - chr3_2:9791531-9791550 Msa0394690:intron 25.0%
! GTATTCATCAAACATTACAA+GGG + chr3_2:9791658-9791677 None:intergenic 25.0%
! AGTATTCATCAAACATTACA+AGG + chr3_2:9791659-9791678 None:intergenic 25.0%
! GAACGGTAATAATATCTAAA+AGG + chr3_2:9791767-9791786 None:intergenic 25.0%
! ATTATAATCCTTGAAGTTGT+GGG - chr3_2:9791798-9791817 Msa0394690:intron 25.0%
! TTTGATCACATTAATCTTGT+TGG - chr3_2:9791883-9791902 Msa0394690:intron 25.0%
! TTGATCACATTAATCTTGTT+GGG - chr3_2:9791884-9791903 Msa0394690:intron 25.0%
! GTTTGAGAAATTTCAATTCA+AGG - chr3_2:9791948-9791967 Msa0394690:intron 25.0%
!! GAATCAACAAAATTTCAAGT+TGG + chr3_2:9791975-9791994 None:intergenic 25.0%
TTAATTCAGGAATCGAACTT+AGG - chr3_2:9784089-9784108 Msa0394690:intron 30.0%
TGCTTATAATATTGACAGGA+AGG + chr3_2:9784270-9784289 None:intergenic 30.0%
GAACAAATTGATATTTCTCG+TGG - chr3_2:9784629-9784648 Msa0394690:intron 30.0%
AAAACAAATGTCATCAATCG+CGG + chr3_2:9785061-9785080 None:intergenic 30.0%
GAATTTCGATATGGAAAATG+TGG - chr3_2:9785250-9785269 Msa0394690:intron 30.0%
! CGATTATGTTCTTTTTGTGA+TGG - chr3_2:9785306-9785325 Msa0394690:CDS 30.0%
CAATCATTTACGACGAAATA+CGG + chr3_2:9785529-9785548 None:intergenic 30.0%
AGTTGTTATGAATCTGTTAG+AGG - chr3_2:9785651-9785670 Msa0394690:CDS 30.0%
!! CTTAGTTTTCGACTTACATA+GGG + chr3_2:9785687-9785706 None:intergenic 30.0%
CTGAAAACGTCAATTGTATT+CGG + chr3_2:9785728-9785747 None:intergenic 30.0%
AATTAATGTCATCATGAGCT+AGG - chr3_2:9785814-9785833 Msa0394690:CDS 30.0%
ATACCATTATACCAATGTTG+TGG - chr3_2:9785858-9785877 Msa0394690:CDS 30.0%
TCCAATAAAATGACCAAGAA+GGG + chr3_2:9785893-9785912 None:intergenic 30.0%
ATACCATATAAGAACAGAAG+TGG + chr3_2:9786095-9786114 None:intergenic 30.0%
GTGTTTGATCTCGAAATATT+TGG + chr3_2:9786132-9786151 None:intergenic 30.0%
!! TCATAGATATAACTGGCTTT+AGG - chr3_2:9786182-9786201 Msa0394690:CDS 30.0%
!!! TAGGTCAATTTTAGAACAAG+CGG - chr3_2:9786201-9786220 Msa0394690:CDS 30.0%
AAAATGTAATGTGAGAGTCT+TGG - chr3_2:9786363-9786382 Msa0394690:CDS 30.0%
TGGAGCTTATAAAATTGCTT+TGG - chr3_2:9786383-9786402 Msa0394690:CDS 30.0%
TCATTTCTGCTGTAACTTAA+AGG - chr3_2:9786411-9786430 Msa0394690:CDS 30.0%
ATGGTCTATGTAATCTTTCT+TGG - chr3_2:9786461-9786480 Msa0394690:CDS 30.0%
TCAGATTCTAACTCAAAATC+AGG - chr3_2:9786626-9786645 Msa0394690:CDS 30.0%
CAGATTCTAACTCAAAATCA+GGG - chr3_2:9786627-9786646 Msa0394690:CDS 30.0%
!!! AACAGGTCTTTTGAAATCAA+AGG - chr3_2:9786665-9786684 Msa0394690:CDS 30.0%
!!! CTTTTGAAATCAAAGGTCTT+AGG - chr3_2:9786672-9786691 Msa0394690:CDS 30.0%
! AAGGTCTTAGGATCTTTTAT+TGG - chr3_2:9786684-9786703 Msa0394690:CDS 30.0%
! AGGTCTTAGGATCTTTTATT+GGG - chr3_2:9786685-9786704 Msa0394690:CDS 30.0%
! ATGAATTTTTGTGGATCCTT+TGG - chr3_2:9786727-9786746 Msa0394690:CDS 30.0%
AGAGCACAAACATAAACATT+AGG + chr3_2:9786771-9786790 None:intergenic 30.0%
TACACATTTAGTAAAGTCTG+AGG + chr3_2:9787028-9787047 None:intergenic 30.0%
ACCACTTATTTACACATCTT+AGG - chr3_2:9787131-9787150 Msa0394690:CDS 30.0%
ACCTAAGATGTGTAAATAAG+TGG + chr3_2:9787135-9787154 None:intergenic 30.0%
! TTCTGTTTATCCATTTTAGG+TGG - chr3_2:9787214-9787233 Msa0394690:CDS 30.0%
!! TCTGTTTATCCATTTTAGGT+GGG - chr3_2:9787215-9787234 Msa0394690:CDS 30.0%
CTAGACAAAAAGAAAATTGG+AGG + chr3_2:9787270-9787289 None:intergenic 30.0%
! CTCCAATTTTCTTTTTGTCT+AGG - chr3_2:9787268-9787287 Msa0394690:CDS 30.0%
! TTTTCTTTTTGTCTAGGTAG+GGG - chr3_2:9787274-9787293 Msa0394690:CDS 30.0%
AAATCAAAACCAACATGTAG+TGG + chr3_2:9787340-9787359 None:intergenic 30.0%
!!! ACTACATGTTGGTTTTGATT+TGG - chr3_2:9787339-9787358 Msa0394690:CDS 30.0%
!!! ATCTAACTCTATGCTTTTTC+TGG + chr3_2:9787654-9787673 None:intergenic 30.0%
CATAGAGTTAGATTATGACT+AGG - chr3_2:9787661-9787680 Msa0394690:intron 30.0%
TAGATTATGACTAGGTAGAT+TGG - chr3_2:9787669-9787688 Msa0394690:intron 30.0%
TGTAGCTTATCTTTCATCAA+GGG - chr3_2:9787824-9787843 Msa0394690:intron 30.0%
TACTGTTGAAAGATGAGTTA+GGG + chr3_2:9787913-9787932 None:intergenic 30.0%
ATACTGTTGAAAGATGAGTT+AGG + chr3_2:9787914-9787933 None:intergenic 30.0%
!! ATTGATTGGTCTAAATAAGC+AGG - chr3_2:9787936-9787955 Msa0394690:intron 30.0%
!! TCTAAATAAGCAGGTATTGA+TGG - chr3_2:9787945-9787964 Msa0394690:intron 30.0%
!!! AGGTATTGATTTTGAAAAGG+GGG - chr3_2:9788017-9788036 Msa0394690:intron 30.0%
!! ATTTTGAAAAGGGGGAAATA+GGG - chr3_2:9788025-9788044 Msa0394690:intron 30.0%
TTAGCTAGTGGAAAAAAGAT+TGG + chr3_2:9788067-9788086 None:intergenic 30.0%
TCCAAAACCAAATCTTCAAT+GGG - chr3_2:9788123-9788142 Msa0394690:intron 30.0%
AGATTACTATGTAGTGATAG+AGG + chr3_2:9788200-9788219 None:intergenic 30.0%
AAGAAGAATCGATCAAATAG+AGG + chr3_2:9788303-9788322 None:intergenic 30.0%
TCTTCTAAATTTGGAGGATT+TGG - chr3_2:9788432-9788451 Msa0394690:intron 30.0%
AACATTGCAATATCAACTGT+GGG + chr3_2:9788908-9788927 None:intergenic 30.0%
AAACATTGCAATATCAACTG+TGG + chr3_2:9788909-9788928 None:intergenic 30.0%
! ATTCTCTTGAGGTTTTTGAA+CGG + chr3_2:9789054-9789073 None:intergenic 30.0%
TGCATCTATAAATTCTCTTG+AGG + chr3_2:9789065-9789084 None:intergenic 30.0%
CAAGAATCTGAAAATTCAAC+TGG - chr3_2:9789163-9789182 Msa0394690:intron 30.0%
ATGTAAAAAGAAGGCAAGAT+GGG - chr3_2:9789227-9789246 Msa0394690:intron 30.0%
! TTCTTTTATGCAGTAGATCT+TGG - chr3_2:9789493-9789512 Msa0394690:intron 30.0%
! AACGGCTGAAAAATCTTTTA+TGG - chr3_2:9789524-9789543 Msa0394690:intron 30.0%
! TATGGATTGATGCTAAAAGT+AGG - chr3_2:9789542-9789561 Msa0394690:intron 30.0%
!! GTAATATAAATTGGTAGTGC+TGG + chr3_2:9789663-9789682 None:intergenic 30.0%
CACACCCAAGTAATATAAAT+TGG + chr3_2:9789672-9789691 None:intergenic 30.0%
TAATAGCCAAGAATATGTTG+CGG + chr3_2:9789716-9789735 None:intergenic 30.0%
! TGGTCAGTAATTATCACTTT+TGG + chr3_2:9789772-9789791 None:intergenic 30.0%
TATGCCATAAGCAAATACAA+TGG + chr3_2:9789843-9789862 None:intergenic 30.0%
TATTTGCTTATGGCATATAC+TGG - chr3_2:9789846-9789865 Msa0394690:intron 30.0%
ATTTGCTTATGGCATATACT+GGG - chr3_2:9789847-9789866 Msa0394690:intron 30.0%
!! GTGATGATTTTGACAATAGA+TGG - chr3_2:9789959-9789978 Msa0394690:intron 30.0%
! CAATAGATGGGAGAAAATTT+TGG - chr3_2:9789972-9789991 Msa0394690:intron 30.0%
TTCTGATACTTGGAATAAAG+TGG - chr3_2:9790230-9790249 Msa0394690:intron 30.0%
GATCTTCTTGAATACTGTAT+GGG + chr3_2:9790307-9790326 None:intergenic 30.0%
! TGTCGGCTATTTGAATATAA+AGG - chr3_2:9790474-9790493 Msa0394690:intron 30.0%
CGTTTCAAAACATATTGAGA+TGG + chr3_2:9790555-9790574 None:intergenic 30.0%
!!! CTCAATATGTTTTGAAACGA+TGG - chr3_2:9790556-9790575 Msa0394690:intron 30.0%
AGATACCCAAAGTAGAAATA+TGG - chr3_2:9790833-9790852 Msa0394690:intron 30.0%
GATACCCAAAGTAGAAATAT+GGG - chr3_2:9790834-9790853 Msa0394690:intron 30.0%
! CTTTCCCATATTTCTACTTT+GGG + chr3_2:9790841-9790860 None:intergenic 30.0%
! ACTTTCCCATATTTCTACTT+TGG + chr3_2:9790842-9790861 None:intergenic 30.0%
GTTATGACAGGAAGAATAAA+AGG + chr3_2:9790931-9790950 None:intergenic 30.0%
GATAGGTTAACTAGTAATGT+AGG + chr3_2:9791038-9791057 None:intergenic 30.0%
TGAGCTTGTAGATTAAATAC+AGG - chr3_2:9791089-9791108 Msa0394690:intron 30.0%
CAACTGAACAATCAAATAAG+AGG + chr3_2:9791394-9791413 None:intergenic 30.0%
GATTGTTCAGTTGAACTTAA+TGG - chr3_2:9791401-9791420 Msa0394690:intron 30.0%
CTTATACAATCAAAACTTGC+AGG - chr3_2:9791677-9791696 Msa0394690:intron 30.0%
CACAACTTCAAGGATTATAA+TGG + chr3_2:9791799-9791818 None:intergenic 30.0%
CATTATAATCCTTGAAGTTG+TGG - chr3_2:9791797-9791816 Msa0394690:intron 30.0%
TTATAATCCTTGAAGTTGTG+GGG - chr3_2:9791799-9791818 Msa0394690:intron 30.0%
! ATAATGTTGCTTCTTCATTG+TGG - chr3_2:9792086-9792105 Msa0394690:intron 30.0%
! ATATTACAAAATACTGGCCT+TGG + chr3_2:9792412-9792431 None:intergenic 30.0%
ATATTAATATAGGTGGGGTA+AGG - chr3_2:9792501-9792520 Msa0394690:five_prime_UTR 30.0%
AAAAGATGAAGAGAGAGGAT+TGG - chr3_2:9783638-9783657 Msa0394690:CDS 35.0%
! ATGAAAATTGAAGATGGTGG+TGG + chr3_2:9783786-9783805 None:intergenic 35.0%
!!! ATGTTAACCTTTTGGTTCTC+AGG - chr3_2:9784009-9784028 Msa0394690:intron 35.0%
!!! TGTTAACCTTTTGGTTCTCA+GGG - chr3_2:9784010-9784029 Msa0394690:intron 35.0%
ATCATAATCCAGAGTTCTGT+CGG - chr3_2:9784036-9784055 Msa0394690:intron 35.0%
!! ATGCTTTTGTTCGAGTTAGT+TGG - chr3_2:9784173-9784192 Msa0394690:intron 35.0%
!! TGCTTTTGTTCGAGTTAGTT+GGG - chr3_2:9784174-9784193 Msa0394690:intron 35.0%
AAAACCAATGTCATCAATCG+CGG + chr3_2:9784857-9784876 None:intergenic 35.0%
ATAGTGAGCTTGATGAAATC+AGG - chr3_2:9784894-9784913 Msa0394690:CDS 35.0%
TAGTGAGCTTGATGAAATCA+GGG - chr3_2:9784895-9784914 Msa0394690:CDS 35.0%
!! TGTTCTTTTTGTGATGGAGT+TGG - chr3_2:9785312-9785331 Msa0394690:CDS 35.0%
! AACAAAGAAGAAGCACAACA+AGG + chr3_2:9785435-9785454 None:intergenic 35.0%
!! TGAATTGTGTTGGTTGACAT+TGG - chr3_2:9785473-9785492 Msa0394690:CDS 35.0%
!! GAATTGTGTTGGTTGACATT+GGG - chr3_2:9785474-9785493 Msa0394690:CDS 35.0%
!! AATTGTGTTGGTTGACATTG+GGG - chr3_2:9785475-9785494 Msa0394690:CDS 35.0%
!! GCTTAGTTTTCGACTTACAT+AGG + chr3_2:9785688-9785707 None:intergenic 35.0%
CCAATAAAATGACCAAGAAG+GGG + chr3_2:9785892-9785911 None:intergenic 35.0%
CTCCAATAAAATGACCAAGA+AGG + chr3_2:9785894-9785913 None:intergenic 35.0%
!! TGGTCATTTTATTGGAGTCA+TGG - chr3_2:9785897-9785916 Msa0394690:CDS 35.0%
! ATTGGAGTCATGGTTTTTGA+TGG - chr3_2:9785907-9785926 Msa0394690:CDS 35.0%
TGTAATGCTGCTAGAATGTA+AGG - chr3_2:9785978-9785997 Msa0394690:CDS 35.0%
! ATTATAGCACAAGTTGGCAA+TGG - chr3_2:9786061-9786080 Msa0394690:CDS 35.0%
AAGCCACTTCTGTTCTTATA+TGG - chr3_2:9786089-9786108 Msa0394690:CDS 35.0%
!!! AGGTCAATTTTAGAACAAGC+GGG - chr3_2:9786202-9786221 Msa0394690:CDS 35.0%
! ATCATATAGAAGGGAAGCAT+TGG + chr3_2:9786285-9786304 None:intergenic 35.0%
TAAGCTAACGGTATTTGACT+TGG - chr3_2:9786340-9786359 Msa0394690:CDS 35.0%
ATGCTTTCTTGCATAGCTAA+AGG - chr3_2:9786485-9786504 Msa0394690:CDS 35.0%
!! TAGAGTTAACTGCTTTTGCT+AGG - chr3_2:9786561-9786580 Msa0394690:CDS 35.0%
CAAAATCAGGGTATATTTGC+TGG - chr3_2:9786639-9786658 Msa0394690:CDS 35.0%
TTTGTGCTCTGCTAATACTT+AGG - chr3_2:9786781-9786800 Msa0394690:CDS 35.0%
TTATGATGCAAGAATTGGTG+TGG + chr3_2:9787180-9787199 None:intergenic 35.0%
GTGCTTTATGATGCAAGAAT+TGG + chr3_2:9787185-9787204 None:intergenic 35.0%
TGGATAAACAGAATGATACC+TGG + chr3_2:9787207-9787226 None:intergenic 35.0%
!! TTATCCATTTTAGGTGGGAA+TGG - chr3_2:9787220-9787239 Msa0394690:CDS 35.0%
!! TATCCATTTTAGGTGGGAAT+GGG - chr3_2:9787221-9787240 Msa0394690:CDS 35.0%
ACAAAAAGAAAATTGGAGGG+AGG + chr3_2:9787266-9787285 None:intergenic 35.0%
TATCATTGAAGTGGGAAACA+AGG + chr3_2:9787303-9787322 None:intergenic 35.0%
!! TGTTGGTTTATGATCCAACT+TGG - chr3_2:9787405-9787424 Msa0394690:CDS 35.0%
TAAAACCACTTGAACCAAGT+TGG + chr3_2:9787422-9787441 None:intergenic 35.0%
CATATATAGTGAGTGTTCTG+AGG - chr3_2:9787489-9787508 Msa0394690:intron 35.0%
TACTCAGTCAATCTGGAAAT+GGG + chr3_2:9787527-9787546 None:intergenic 35.0%
TTACTCAGTCAATCTGGAAA+TGG + chr3_2:9787528-9787547 None:intergenic 35.0%
GGAAGATATATAAGCCTTAG+TGG - chr3_2:9787557-9787576 Msa0394690:intron 35.0%
!! TACAGCTTTGAAAACCACTA+AGG + chr3_2:9787574-9787593 None:intergenic 35.0%
!!! AACTCTATGCTTTTTCTGGA+AGG + chr3_2:9787650-9787669 None:intergenic 35.0%
AGGAGATAACGAGATGTAAT+CGG - chr3_2:9787730-9787749 Msa0394690:intron 35.0%
CTGTAGCTTATCTTTCATCA+AGG - chr3_2:9787823-9787842 Msa0394690:intron 35.0%
GTAGCTTATCTTTCATCAAG+GGG - chr3_2:9787825-9787844 Msa0394690:intron 35.0%
!! AAAGAAAAGCACTTGATGCT+TGG - chr3_2:9787882-9787901 Msa0394690:intron 35.0%
!! GATTTTGAAAAGGGGGAAAT+AGG - chr3_2:9788024-9788043 Msa0394690:intron 35.0%
TCATTAGTCAACTTAGCTAG+TGG + chr3_2:9788079-9788098 None:intergenic 35.0%
GTCCAAAACCAAATCTTCAA+TGG - chr3_2:9788122-9788141 Msa0394690:intron 35.0%
CCAAAACCAAATCTTCAATG+GGG - chr3_2:9788124-9788143 Msa0394690:intron 35.0%
CTTCTAACTAGGGATTCTAT+TGG - chr3_2:9788243-9788262 Msa0394690:intron 35.0%
AGGAAACTTATAGAAGTTGC+CGG + chr3_2:9788406-9788425 None:intergenic 35.0%
TCCTCCAAATTTAGAAGAAG+TGG + chr3_2:9788430-9788449 None:intergenic 35.0%
TGGCAGGAAACTTATAGAAA+TGG + chr3_2:9788459-9788478 None:intergenic 35.0%
! TTTCCTGCCACTTCTAAATT+AGG - chr3_2:9788469-9788488 Msa0394690:intron 35.0%
CAATGCTCCTAATTTAGAAG+TGG + chr3_2:9788479-9788498 None:intergenic 35.0%
! ATCAAGAAGTGTAACAGACA+TGG + chr3_2:9788629-9788648 None:intergenic 35.0%
ATGTCTGTTACACTTCTTGA+TGG - chr3_2:9788628-9788647 Msa0394690:intron 35.0%
AAAGCAAGTTGTTCTCATCA+TGG - chr3_2:9788700-9788719 Msa0394690:intron 35.0%
TCATCATGGATATAGATCTC+AGG - chr3_2:9788714-9788733 Msa0394690:intron 35.0%
! AACTGCACTTGATAACATGT+TGG - chr3_2:9788784-9788803 Msa0394690:intron 35.0%
GGTGAAGAAAAATTGCACAA+TGG - chr3_2:9788809-9788828 Msa0394690:intron 35.0%
GAAGAAAAATTGCACAATGG+AGG - chr3_2:9788812-9788831 Msa0394690:intron 35.0%
AAAATTGCACAATGGAGGTA+TGG - chr3_2:9788817-9788836 Msa0394690:intron 35.0%
! ATTGAGGTACATGCTCTAAA+TGG - chr3_2:9788866-9788885 Msa0394690:intron 35.0%
ACATTGCAATATCAACTGTG+GGG + chr3_2:9788907-9788926 None:intergenic 35.0%
CAAGAATATGCTCGATCAAT+GGG - chr3_2:9789001-9789020 Msa0394690:intron 35.0%
! AAGTTTGCTTGTTCCAGATA+TGG - chr3_2:9789085-9789104 Msa0394690:intron 35.0%
CAAGCATGCATGTAAAAAGA+AGG - chr3_2:9789218-9789237 Msa0394690:intron 35.0%
CATGTAAAAAGAAGGCAAGA+TGG - chr3_2:9789226-9789245 Msa0394690:intron 35.0%
!! GGTTATTCATAGCTTTGTGA+AGG - chr3_2:9789255-9789274 Msa0394690:intron 35.0%
AAGAAGAATGTATGCTGTGA+TGG - chr3_2:9789324-9789343 Msa0394690:intron 35.0%
GTTTGCAGAATACAAAACTG+TGG - chr3_2:9789354-9789373 Msa0394690:intron 35.0%
TAAAGTTCGTAATTTGGGTC+TGG - chr3_2:9789408-9789427 Msa0394690:intron 35.0%
ATTCTTGGCTATTACAGACA+TGG - chr3_2:9789722-9789741 Msa0394690:intron 35.0%
!! CCATGACATGACTTTGAAAT+CGG - chr3_2:9789789-9789808 Msa0394690:intron 35.0%
CTTGCCATTGTATTTGCTTA+TGG - chr3_2:9789836-9789855 Msa0394690:intron 35.0%
TTTGCTTATGGCATATACTG+GGG - chr3_2:9789848-9789867 Msa0394690:intron 35.0%
TGTATGAAGATCGCAAGTTA+TGG - chr3_2:9790034-9790053 Msa0394690:intron 35.0%
GTATGAAGATCGCAAGTTAT+GGG - chr3_2:9790035-9790054 Msa0394690:intron 35.0%
AACACATCCTTCATGAATGT+TGG + chr3_2:9790063-9790082 None:intergenic 35.0%
TTCATGAAGGATGTGTTCTT+AGG - chr3_2:9790066-9790085 Msa0394690:intron 35.0%
ATTGACACTTTCAGATCGTT+GGG + chr3_2:9790106-9790125 None:intergenic 35.0%
AATTGACACTTTCAGATCGT+TGG + chr3_2:9790107-9790126 None:intergenic 35.0%
CAAAAGCAGATTCTGATACT+TGG - chr3_2:9790220-9790239 Msa0394690:intron 35.0%
!! ACACTCTTTTCTAAAGGTGA+AGG + chr3_2:9790270-9790289 None:intergenic 35.0%
!! CTTTAGAAAAGAGTGTTGCA+GGG - chr3_2:9790274-9790293 Msa0394690:intron 35.0%
GGATCTTCTTGAATACTGTA+TGG + chr3_2:9790308-9790327 None:intergenic 35.0%
AAGATCCAAGCTGAGATTAT+TGG - chr3_2:9790321-9790340 Msa0394690:intron 35.0%
!!! AAACAGAGACTTTTTTGTCG+TGG - chr3_2:9790419-9790438 Msa0394690:intron 35.0%
GGTGAATGAAGTAAAATCAG+AGG - chr3_2:9790440-9790459 Msa0394690:intron 35.0%
TTATCTTTGTCGACATGCAT+TGG - chr3_2:9790497-9790516 Msa0394690:intron 35.0%
! TTGGTGGTTCTTCAATATTC+TGG - chr3_2:9790516-9790535 Msa0394690:intron 35.0%
AGAAGAATCTGAACATATGC+TGG - chr3_2:9790611-9790630 Msa0394690:intron 35.0%
ATCACTAAAATTGAGCGAAG+AGG - chr3_2:9790668-9790687 Msa0394690:intron 35.0%
TCACTAAAATTGAGCGAAGA+GGG - chr3_2:9790669-9790688 Msa0394690:intron 35.0%
ACTTTGGGTATCTTCTTCAA+TGG + chr3_2:9790826-9790845 None:intergenic 35.0%
ACTAGACAACATGCAACAAA+TGG - chr3_2:9791004-9791023 Msa0394690:intron 35.0%
AGGTTAACTAGTAATGTAGG+AGG + chr3_2:9791035-9791054 None:intergenic 35.0%
TACTATATACGTGAACCTAG+AGG - chr3_2:9791156-9791175 Msa0394690:intron 35.0%
GTGGGATGCTTATAGTTAAA+AGG - chr3_2:9791209-9791228 Msa0394690:intron 35.0%
TTAGTGAAACATACCAAACC+AGG + chr3_2:9791615-9791634 None:intergenic 35.0%
! ATACAGCATTAGGGTTAGTA+TGG - chr3_2:9791731-9791750 Msa0394690:intron 35.0%
!! GACTCTGAAATTGTCTCAAA+CGG - chr3_2:9791918-9791937 Msa0394690:intron 35.0%
ATGTATAGGCTAGGAAAATG+AGG - chr3_2:9792315-9792334 Msa0394690:intron 35.0%
TAGAGAATGGAATACCTCAA+AGG - chr3_2:9792360-9792379 Msa0394690:five_prime_UTR 35.0%
TTTGCCAACATAACCTCAAT+TGG + chr3_2:9792386-9792405 None:intergenic 35.0%
GCAAGAAAAGATGAAGAGAG+AGG - chr3_2:9783633-9783652 Msa0394690:CDS 40.0%
TGATGATCTGCAACAGAAAG+TGG + chr3_2:9783757-9783776 None:intergenic 40.0%
!! CTTATTTTCCGACAGAACTC+TGG + chr3_2:9784047-9784066 None:intergenic 40.0%
GTTGGGTATAGAACTGTATG+AGG - chr3_2:9784191-9784210 Msa0394690:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr3_2:9784411-9784430 Msa0394690:intron 40.0%
! TTTGTCGATTATCGGCACTA+TGG - chr3_2:9784516-9784535 Msa0394690:intron 40.0%
ATAGTGAGCTTGACGAAATC+AGG - chr3_2:9784692-9784711 Msa0394690:intron 40.0%
TAGTGAGCTTGACGAAATCA+GGG - chr3_2:9784693-9784712 Msa0394690:intron 40.0%
ATAGTGAGCTTGACGAAATC+AGG - chr3_2:9784692-9784711 Msa0394690:intron 40.0%
TAGTGAGCTTGACGAAATCA+GGG - chr3_2:9784693-9784712 Msa0394690:intron 40.0%
TCGATATGGAAAATGTGGCT+TGG - chr3_2:9785255-9785274 Msa0394690:intron 40.0%
GAAAACAGGCTGAATTGTGT+TGG - chr3_2:9785463-9785482 Msa0394690:CDS 40.0%
TATCTACGCACGTATATGAG+AGG - chr3_2:9785604-9785623 Msa0394690:CDS 40.0%
CAGCCACAACATTGGTATAA+TGG + chr3_2:9785864-9785883 None:intergenic 40.0%
!! CCCCTTCTTGGTCATTTTAT+TGG - chr3_2:9785889-9785908 Msa0394690:CDS 40.0%
CTCATGACCATCAAGTCAAA+TGG - chr3_2:9786239-9786258 Msa0394690:CDS 40.0%
!! GTTGTTGCCATTTGACTTGA+TGG + chr3_2:9786249-9786268 None:intergenic 40.0%
!! AAGCATTGGTGCAACAGTTT+AGG + chr3_2:9786271-9786290 None:intergenic 40.0%
CTTTCTTGCATAGCTAAAGG+AGG - chr3_2:9786488-9786507 Msa0394690:CDS 40.0%
!! AGTTAACTGCTTTTGCTAGG+AGG - chr3_2:9786564-9786583 Msa0394690:CDS 40.0%
! GGTATATTTGCTGGCATAAC+AGG - chr3_2:9786648-9786667 Msa0394690:CDS 40.0%
ATTCCCTGACTAAAGTTGCA+TGG - chr3_2:9786831-9786850 Msa0394690:CDS 40.0%
AAGCCATGCAACTTTAGTCA+GGG + chr3_2:9786837-9786856 None:intergenic 40.0%
TAAGCCATGCAACTTTAGTC+AGG + chr3_2:9786838-9786857 None:intergenic 40.0%
ATCCCACTTTCAGACTAACA+GGG + chr3_2:9786893-9786912 None:intergenic 40.0%
! TTCTTGCATCATAAAGCACC+AGG - chr3_2:9787186-9787205 Msa0394690:CDS 40.0%
AATCCCATTCCCACCTAAAA+TGG + chr3_2:9787227-9787246 None:intergenic 40.0%
TTTCCAGTTCCACTACATGT+TGG - chr3_2:9787328-9787347 Msa0394690:CDS 40.0%
! AAACCAACATGTAGTGGAAC+TGG + chr3_2:9787334-9787353 None:intergenic 40.0%
ATGATCCAACTTGGTTCAAG+TGG - chr3_2:9787414-9787433 Msa0394690:CDS 40.0%
ACACTGTTACTCAGTCAATC+TGG + chr3_2:9787534-9787553 None:intergenic 40.0%
ATTGACTGAGTAACAGTGTG+TGG - chr3_2:9787535-9787554 Msa0394690:intron 40.0%
TTGACTGAGTAACAGTGTGT+GGG - chr3_2:9787536-9787555 Msa0394690:intron 40.0%
!! AGCAGGTATTGATGGTGAAA+AGG - chr3_2:9787953-9787972 Msa0394690:intron 40.0%
!! GCAGGTATTGATGGTGAAAA+GGG - chr3_2:9787954-9787973 Msa0394690:intron 40.0%
!! CAGGTATTGATGGTGAAAAG+GGG - chr3_2:9787955-9787974 Msa0394690:intron 40.0%
!! AGGTATTGATGGTGAAAAGG+GGG - chr3_2:9787956-9787975 Msa0394690:intron 40.0%
!!! TGGTTTTGGACAAACCATCA+TGG + chr3_2:9788113-9788132 None:intergenic 40.0%
!! CCCCATTGAAGATTTGGTTT+TGG + chr3_2:9788127-9788146 None:intergenic 40.0%
AAATGGCCCCATTGAAGATT+TGG + chr3_2:9788133-9788152 None:intergenic 40.0%
GAATCCCTAGTTAGAAGAGT+CGG + chr3_2:9788240-9788259 None:intergenic 40.0%
GATGAGAGGAAGAATGTTTC+AGG + chr3_2:9788342-9788361 None:intergenic 40.0%
GAAACTTATAGAAGTTGCCG+GGG + chr3_2:9788404-9788423 None:intergenic 40.0%
GGAAACTTATAGAAGTTGCC+GGG + chr3_2:9788405-9788424 None:intergenic 40.0%
CCAAATTTAGAAGAAGTGGC+AGG + chr3_2:9788426-9788445 None:intergenic 40.0%
! CCTGCCACTTCTTCTAAATT+TGG - chr3_2:9788423-9788442 Msa0394690:intron 40.0%
GCCACTTCTTCTAAATTTGG+AGG - chr3_2:9788426-9788445 Msa0394690:intron 40.0%
TCTTTCTCATGTTCACCAGT+GGG + chr3_2:9788743-9788762 None:intergenic 40.0%
TTCTTTCTCATGTTCACCAG+TGG + chr3_2:9788744-9788763 None:intergenic 40.0%
! GCACTTGATAACATGTTGGA+AGG - chr3_2:9788788-9788807 Msa0394690:intron 40.0%
TATGGTTGAAGCTGGTATTG+AGG - chr3_2:9788850-9788869 Msa0394690:intron 40.0%
CATTGCAATATCAACTGTGG+GGG + chr3_2:9788906-9788925 None:intergenic 40.0%
! ACAAATCTTGAGCCACTTTC+TGG - chr3_2:9788938-9788957 Msa0394690:intron 40.0%
TCGAATTCCATACCAGAAAG+TGG + chr3_2:9788953-9788972 None:intergenic 40.0%
GTATGGAATTCGAGTCTCAT+GGG - chr3_2:9788960-9788979 Msa0394690:intron 40.0%
TATGGAATTCGAGTCTCATG+GGG - chr3_2:9788961-9788980 Msa0394690:intron 40.0%
CCATTGATCGAGCATATTCT+TGG + chr3_2:9789003-9789022 None:intergenic 40.0%
CCAAGAATATGCTCGATCAA+TGG - chr3_2:9789000-9789019 Msa0394690:intron 40.0%
!! CTCACGTTTTGTTCCATATC+TGG + chr3_2:9789101-9789120 None:intergenic 40.0%
AAAGAAGGCAAGATGGGAAA+TGG - chr3_2:9789233-9789252 Msa0394690:intron 40.0%
AAGAAGGCAAGATGGGAAAT+GGG - chr3_2:9789234-9789253 Msa0394690:intron 40.0%
TGTTTGTTCACTTACTGCCT+GGG + chr3_2:9789305-9789324 None:intergenic 40.0%
TTGTTTGTTCACTTACTGCC+TGG + chr3_2:9789306-9789325 None:intergenic 40.0%
TTTGTATTCTGCAAACTGCC+TGG + chr3_2:9789350-9789369 None:intergenic 40.0%
GCAGAATACAAAACTGTGGT+TGG - chr3_2:9789358-9789377 Msa0394690:intron 40.0%
! GTAATTTGGGTCTGGAGTTT+GGG - chr3_2:9789416-9789435 Msa0394690:intron 40.0%
! TAATTTGGGTCTGGAGTTTG+GGG - chr3_2:9789417-9789436 Msa0394690:intron 40.0%
TTATGCAGTAGATCTTGGTG+AGG - chr3_2:9789498-9789517 Msa0394690:intron 40.0%
TAGATCTTGGTGAGGATCAA+CGG - chr3_2:9789506-9789525 Msa0394690:intron 40.0%
!! ATGCCTCTTGCACTTTTTGT+TGG - chr3_2:9789631-9789650 Msa0394690:intron 40.0%
!! TGCCTCTTGCACTTTTTGTT+GGG - chr3_2:9789632-9789651 Msa0394690:intron 40.0%
GGCACTTTCATCTGATATCA+AGG + chr3_2:9789695-9789714 None:intergenic 40.0%
!! AAAGTGCCGCAACATATTCT+TGG - chr3_2:9789707-9789726 Msa0394690:intron 40.0%
CTATTACAGACATGGCTGAA+AGG - chr3_2:9789730-9789749 Msa0394690:intron 40.0%
CCGATTTCAAAGTCATGTCA+TGG + chr3_2:9789792-9789811 None:intergenic 40.0%
CAAATACAATGGCAAGCACT+AGG + chr3_2:9789832-9789851 None:intergenic 40.0%
ATGAAGGATGTGTTCTTAGG+TGG - chr3_2:9790069-9790088 Msa0394690:intron 40.0%
ACAGTATGAAACCATCTTGC+AGG - chr3_2:9790179-9790198 Msa0394690:intron 40.0%
! CCTGCAACACTCTTTTCTAA+AGG + chr3_2:9790276-9790295 None:intergenic 40.0%
!! CCTTTAGAAAAGAGTGTTGC+AGG - chr3_2:9790273-9790292 Msa0394690:intron 40.0%
CTTGTCATCCTAAACTTGAC+AGG - chr3_2:9790352-9790371 Msa0394690:intron 40.0%
ATGAGACAAACGTTGTTCAC+AGG - chr3_2:9790379-9790398 Msa0394690:intron 40.0%
TGAGACAAACGTTGTTCACA+GGG - chr3_2:9790380-9790399 Msa0394690:intron 40.0%
!! CAGAGGTGTCTTGTATATGT+CGG - chr3_2:9790457-9790476 Msa0394690:intron 40.0%
ATTGAGATGGGAACACTGAA+TGG + chr3_2:9790542-9790561 None:intergenic 40.0%
GGACAAAAGATGCAAAAGTC+AGG - chr3_2:9790577-9790596 Msa0394690:intron 40.0%
TGCAAAAGTCAGGAATGTCA+CGG - chr3_2:9790587-9790606 Msa0394690:intron 40.0%
! AATCTGAACATATGCTGGCT+AGG - chr3_2:9790616-9790635 Msa0394690:intron 40.0%
! ATCTGAACATATGCTGGCTA+GGG - chr3_2:9790617-9790636 Msa0394690:intron 40.0%
TGCATTCCATGCACTAAATG+AGG - chr3_2:9790719-9790738 Msa0394690:intron 40.0%
TAACCTCCTTGTTGGATTGT+AGG - chr3_2:9790947-9790966 Msa0394690:intron 40.0%
AGTTCACCTACAATCCAACA+AGG + chr3_2:9790956-9790975 None:intergenic 40.0%
TGTTGGATTGTAGGTGAACT+CGG - chr3_2:9790956-9790975 Msa0394690:intron 40.0%
AGGCAGAAGTGATGAATGTT+GGG - chr3_2:9790979-9790998 Msa0394690:intron 40.0%
GTAACCCTCGAAGGTTATTA+TGG - chr3_2:9791270-9791289 Msa0394690:intron 40.0%
CCAACACGTGATGATTACTA+CGG - chr3_2:9791426-9791445 Msa0394690:intron 40.0%
CAACACGTGATGATTACTAC+GGG - chr3_2:9791427-9791446 Msa0394690:intron 40.0%
GGACTTGTGTGTAGAAGAAA+TGG - chr3_2:9791468-9791487 Msa0394690:intron 40.0%
! CTGGTTGGTATGGAATTCAT+TGG + chr3_2:9791558-9791577 None:intergenic 40.0%
TGGTTTCGCATACAGCATTA+GGG - chr3_2:9791722-9791741 Msa0394690:intron 40.0%
AACTGTGGTGCTCTTACATT+AGG + chr3_2:9792121-9792140 None:intergenic 40.0%
TGCTCATCTGATGTAGAGAA+TGG - chr3_2:9792347-9792366 Msa0394690:intron 40.0%
AATACCTCAAAGGCCAATTG+AGG - chr3_2:9792370-9792389 Msa0394690:five_prime_UTR 40.0%
!! ATAACCTCAATTGGCCTTTG+AGG + chr3_2:9792377-9792396 None:intergenic 40.0%
AAGGCCAATTGAGGTTATGT+TGG - chr3_2:9792379-9792398 Msa0394690:five_prime_UTR 40.0%
GTTATGTTGGCAAATCTCCA+AGG - chr3_2:9792392-9792411 Msa0394690:five_prime_UTR 40.0%
GTATGAGCGTGAGATGGTTA+GGG + chr3_2:9783694-9783713 None:intergenic 45.0%
TGTATGAGCGTGAGATGGTT+AGG + chr3_2:9783695-9783714 None:intergenic 45.0%
TGTGGAAGAGGAGAGATTAG+AGG + chr3_2:9783734-9783753 None:intergenic 45.0%
AACAGAAAGTGGTGTGGAAG+AGG + chr3_2:9783746-9783765 None:intergenic 45.0%
ATCTGCAACAGAAAGTGGTG+TGG + chr3_2:9783752-9783771 None:intergenic 45.0%
!! ATTGAAGATGGTGGTGGTGT+TGG + chr3_2:9783780-9783799 None:intergenic 45.0%
GATAGTCCCTGAGAACCAAA+AGG + chr3_2:9784019-9784038 None:intergenic 45.0%
GGGTATAGAACTGTATGAGG+TGG - chr3_2:9784194-9784213 Msa0394690:intron 45.0%
GGCATAACTACTACATCCTC+CGG + chr3_2:9784430-9784449 None:intergenic 45.0%
GGAGGATGTAGTAGTTATGC+CGG - chr3_2:9784429-9784448 Msa0394690:intron 45.0%
GTGGTCGCAAATGACAACAT+TGG - chr3_2:9784648-9784667 Msa0394690:intron 45.0%
! TGATCCGCGATTGATGACAT+TGG - chr3_2:9784850-9784869 Msa0394690:intron 45.0%
TGAGCTTGATGAAATCAGGG+TGG - chr3_2:9784898-9784917 Msa0394690:CDS 45.0%
! GCTAGGCTTCGTCTTTTTCT+TGG - chr3_2:9785831-9785850 Msa0394690:CDS 45.0%
! TTGCCCTGTTAGTCTGAAAG+TGG - chr3_2:9786887-9786906 Msa0394690:CDS 45.0%
! TGCCCTGTTAGTCTGAAAGT+GGG - chr3_2:9786888-9786907 Msa0394690:CDS 45.0%
CATCCCACTTTCAGACTAAC+AGG + chr3_2:9786894-9786913 None:intergenic 45.0%
TGTCCATCAGGCATTCACTT+TGG - chr3_2:9787060-9787079 Msa0394690:CDS 45.0%
TCACCAAAGTGAATGCCTGA+TGG + chr3_2:9787066-9787085 None:intergenic 45.0%
AAGAATTGGTGTGGCTAGGA+AGG + chr3_2:9787171-9787190 None:intergenic 45.0%
ATGCAAGAATTGGTGTGGCT+AGG + chr3_2:9787175-9787194 None:intergenic 45.0%
CATGGAAGAAACAGACTTGC+AGG - chr3_2:9787710-9787729 Msa0394690:intron 45.0%
!! GGTATTGATGGTGAAAAGGG+GGG - chr3_2:9787957-9787976 Msa0394690:intron 45.0%
TGAATAGCCTGATGCCATGA+TGG - chr3_2:9788096-9788115 Msa0394690:intron 45.0%
!! AGACGAAGAAAGCATCGAAG+TGG + chr3_2:9788176-9788195 None:intergenic 45.0%
TCCTCTCATCCAACCATCTA+TGG - chr3_2:9788352-9788371 Msa0394690:intron 45.0%
ACCATAGATGGTTGGATGAG+AGG + chr3_2:9788356-9788375 None:intergenic 45.0%
GTAAACCAGAGGACCATAGA+TGG + chr3_2:9788368-9788387 None:intergenic 45.0%
GCTCCTAATTTAGAAGTGGC+AGG + chr3_2:9788475-9788494 None:intergenic 45.0%
ATAGATCTCAGGTTACCCAC+TGG - chr3_2:9788725-9788744 Msa0394690:intron 45.0%
AGGTATGGACGACAGACATA+TGG - chr3_2:9788832-9788851 Msa0394690:intron 45.0%
GACAGACATATGGTTGAAGC+TGG - chr3_2:9788842-9788861 Msa0394690:intron 45.0%
! GAGGTACATGCTCTAAATGG+TGG - chr3_2:9788869-9788888 Msa0394690:intron 45.0%
! TCTTGAGCCACTTTCTGGTA+TGG - chr3_2:9788943-9788962 Msa0394690:intron 45.0%
GGTATGGAATTCGAGTCTCA+TGG - chr3_2:9788959-9788978 Msa0394690:intron 45.0%
! CGTAATTTGGGTCTGGAGTT+TGG - chr3_2:9789415-9789434 Msa0394690:intron 45.0%
!! GCCTCTTGCACTTTTTGTTG+GGG - chr3_2:9789633-9789652 Msa0394690:intron 45.0%
! ACCCCAACAAAAAGTGCAAG+AGG + chr3_2:9789637-9789656 None:intergenic 45.0%
CTTATGGCATATACTGGGGA+AGG - chr3_2:9789852-9789871 Msa0394690:intron 45.0%
GGATAGATTTGAGCTTCGAC+AGG - chr3_2:9789993-9790012 Msa0394690:intron 45.0%
ATGGGCACCAACATTCATGA+AGG - chr3_2:9790053-9790072 Msa0394690:intron 45.0%
ATGAAACCATCTTGCAGGAC+AGG - chr3_2:9790184-9790203 Msa0394690:intron 45.0%
TTCATACCTGTCCTGCAAGA+TGG + chr3_2:9790193-9790212 None:intergenic 45.0%
CTGCACCAATAATCTCAGCT+TGG + chr3_2:9790329-9790348 None:intergenic 45.0%
AGCTGAGATTATTGGTGCAG+TGG - chr3_2:9790329-9790348 Msa0394690:intron 45.0%
TCATCCTAAACTTGACAGGC+AGG - chr3_2:9790356-9790375 Msa0394690:intron 45.0%
TCATCCTGCCTGTCAAGTTT+AGG + chr3_2:9790363-9790382 None:intergenic 45.0%
TGTTCACAGGGTGCATGATA+TGG - chr3_2:9790392-9790411 Msa0394690:intron 45.0%
TCTTTGTCGACATGCATTGG+TGG - chr3_2:9790500-9790519 Msa0394690:intron 45.0%
GCAAAAGTCAGGAATGTCAC+GGG - chr3_2:9790588-9790607 Msa0394690:intron 45.0%
TGTGTGCCTCATTTAGTGCA+TGG + chr3_2:9790728-9790747 None:intergenic 45.0%
CTACAGAAGCTGGTACATCA+GGG - chr3_2:9790784-9790803 Msa0394690:intron 45.0%
TACAGAAGCTGGTACATCAG+GGG - chr3_2:9790785-9790804 Msa0394690:intron 45.0%
TCCTGTCATAACCTCCTTGT+TGG - chr3_2:9790939-9790958 Msa0394690:intron 45.0%
TCCAACAAGGAGGTTATGAC+AGG + chr3_2:9790943-9790962 None:intergenic 45.0%
TCACCTACAATCCAACAAGG+AGG + chr3_2:9790953-9790972 None:intergenic 45.0%
GAGGCAGAAGTGATGAATGT+TGG - chr3_2:9790978-9790997 Msa0394690:intron 45.0%
GGCAGAAGTGATGAATGTTG+GGG - chr3_2:9790980-9790999 Msa0394690:intron 45.0%
CGCACCATAATAACCTTCGA+GGG + chr3_2:9791277-9791296 None:intergenic 45.0%
CCGTAGTAATCATCACGTGT+TGG + chr3_2:9791429-9791448 None:intergenic 45.0%
GGGAATCAACAGACTCTTCA+AGG - chr3_2:9791447-9791466 Msa0394690:intron 45.0%
TAATAACCATCGTGGCTGGT+TGG + chr3_2:9791573-9791592 None:intergenic 45.0%
ACCAGCCACGATGGTTATTA+TGG - chr3_2:9791573-9791592 Msa0394690:intron 45.0%
ACCATAATAACCATCGTGGC+TGG + chr3_2:9791577-9791596 None:intergenic 45.0%
GTGCACCATAATAACCATCG+TGG + chr3_2:9791581-9791600 None:intergenic 45.0%
ACATCAAAGCATGCCTGGTT+TGG - chr3_2:9791599-9791618 Msa0394690:intron 45.0%
TCAAAACTTGCAGGCACAAC+TGG - chr3_2:9791686-9791705 Msa0394690:intron 45.0%
CAACTGGATTTCTTGCGAAC+TGG - chr3_2:9791702-9791721 Msa0394690:intron 45.0%
CTGGTTTCGCATACAGCATT+AGG - chr3_2:9791721-9791740 Msa0394690:intron 45.0%
ATCCTTGAAGTTGTGGGGAT+CGG - chr3_2:9791804-9791823 Msa0394690:intron 45.0%
! TGTTGCTTCTTCATTGTGGC+AGG - chr3_2:9792090-9792109 Msa0394690:intron 45.0%
GATGGATCTTCGTGTAACTG+TGG + chr3_2:9792136-9792155 None:intergenic 45.0%
TTAGAGGAAGAGTTCACGCG+AGG + chr3_2:9783718-9783737 None:intergenic 50.0%
ATTCCGCTACGTTGTAGCAC+CGG + chr3_2:9784451-9784470 None:intergenic 50.0%
TGAGCTTGACGAAATCAGGG+TGG - chr3_2:9784696-9784715 Msa0394690:intron 50.0%
TGAGCTTGACGAAATCAGGG+TGG - chr3_2:9784696-9784715 Msa0394690:intron 50.0%
!! TGTGATGGAGTTGGTGTGTG+TGG - chr3_2:9785321-9785340 Msa0394690:CDS 50.0%
GGGCTTAACAGCCACAACAT+TGG + chr3_2:9785872-9785891 None:intergenic 50.0%
AAAGCACACCTCTGTCCATC+AGG - chr3_2:9787048-9787067 Msa0394690:CDS 50.0%
! AGTGAATGCCTGATGGACAG+AGG + chr3_2:9787059-9787078 None:intergenic 50.0%
GATGGTGAAAAGGGGGGAAA+AGG - chr3_2:9787963-9787982 Msa0394690:intron 50.0%
GGACAAACCATCATGGCATC+AGG + chr3_2:9788106-9788125 None:intergenic 50.0%
AGAAGAGTCGGTCGGTCAAA+TGG + chr3_2:9788228-9788247 None:intergenic 50.0%
! ACCGACCGACTCTTCTAACT+AGG - chr3_2:9788232-9788251 Msa0394690:intron 50.0%
CCCTAGTTAGAAGAGTCGGT+CGG + chr3_2:9788236-9788255 None:intergenic 50.0%
! CCGACCGACTCTTCTAACTA+GGG - chr3_2:9788233-9788252 Msa0394690:intron 50.0%
TCCAACCATCTATGGTCCTC+TGG - chr3_2:9788360-9788379 Msa0394690:intron 50.0%
ACCAGAGGACCATAGATGGT+TGG + chr3_2:9788364-9788383 None:intergenic 50.0%
! TCACGAACTTTTACCAGCCC+AGG - chr3_2:9789285-9789304 Msa0394690:intron 50.0%
GAATGTATGCTGTGATGGCC+AGG - chr3_2:9789329-9789348 Msa0394690:intron 50.0%
! CAGACATGGCTGAAAGGTGT+AGG - chr3_2:9789736-9789755 Msa0394690:intron 50.0%
! ACATGGCTGAAAGGTGTAGG+TGG - chr3_2:9789739-9789758 Msa0394690:intron 50.0%
CTTGCAGGACAGGTATGAAG+AGG - chr3_2:9790194-9790213 Msa0394690:intron 50.0%
AGCAAGAGTCCTACAGAAGC+TGG - chr3_2:9790774-9790793 Msa0394690:intron 50.0%
CCTGATGTACCAGCTTCTGT+AGG + chr3_2:9790786-9790805 None:intergenic 50.0%
CCTACAGAAGCTGGTACATC+AGG - chr3_2:9790783-9790802 Msa0394690:intron 50.0%
TGGATTGTAGGTGAACTCGG+AGG - chr3_2:9790959-9790978 Msa0394690:intron 50.0%
AGAACTGCAGTAACCCTCGA+AGG - chr3_2:9791261-9791280 Msa0394690:intron 50.0%
GCGCACCATAATAACCTTCG+AGG + chr3_2:9791278-9791297 None:intergenic 50.0%
CGAGGTGTATGAGCGTGAGA+TGG + chr3_2:9783700-9783719 None:intergenic 55.0%
!! ATGCCGGTGCTACAACGTAG+CGG - chr3_2:9784445-9784464 Msa0394690:CDS 55.0%
GTGGCTGTTAAGCCCCTTCT+TGG - chr3_2:9785877-9785896 Msa0394690:CDS 55.0%
AGAGTCGGTCGGTCAAATGG+AGG + chr3_2:9788225-9788244 None:intergenic 55.0%
TGTTCTGTCGAGCTCGTGGT+CGG + chr3_2:9789141-9789160 None:intergenic 55.0%
TGCTTGTTCTGTCGAGCTCG+TGG + chr3_2:9789145-9789164 None:intergenic 55.0%
TGTTCACTTACTGCCTGGGC+TGG + chr3_2:9789301-9789320 None:intergenic 55.0%
! TTTGGGTCTGGAGTTTGGGG+AGG - chr3_2:9789420-9789439 Msa0394690:intron 55.0%
GCAGGACAGGTATGAAGAGG+AGG - chr3_2:9790197-9790216 Msa0394690:intron 55.0%
GCAACAGAGTGTGCAGGGAA+TGG - chr3_2:9791296-9791315 Msa0394690:intron 55.0%
TCCATACCAACCAGCCACGA+TGG - chr3_2:9791564-9791583 Msa0394690:intron 55.0%
! ACCATCGTGGCTGGTTGGTA+TGG + chr3_2:9791568-9791587 None:intergenic 55.0%
GGTGCACATCAAAGCATGCC+TGG - chr3_2:9791594-9791613 Msa0394690:intron 55.0%
GTCCGATCCCCACAACTTCA+AGG + chr3_2:9791809-9791828 None:intergenic 55.0%
TCGAGCTCGTGGTCGGTTGA+AGG + chr3_2:9789134-9789153 None:intergenic 60.0%
GCTGGTACATCAGGGGCTCA+TGG - chr3_2:9790792-9790811 Msa0394690:intron 60.0%
TGGTGCGCAACAGAGTGTGC+AGG - chr3_2:9791290-9791309 Msa0394690:intron 60.0%
GGTGCGCAACAGAGTGTGCA+GGG - chr3_2:9791291-9791310 Msa0394690:intron 60.0%
GACGCTCAAGCGTGTCTCGA+TGG + chr3_2:9792154-9792173 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 9783631 9792546 9783631 ID=Msa0394690;Name=Msa0394690
chr3_2 mRNA 9783631 9792546 9783631 ID=Msa0394690-mRNA-1;Parent=Msa0394690;Name=Msa0394690-mRNA-1;_AED=0.05;_eAED=0.05;_QI=224|0.75|0.77|1|0.87|0.88|9|0|870
chr3_2 exon 9783631 9783664 9783631 ID=Msa0394690-mRNA-1:exon:2563;Parent=Msa0394690-mRNA-1
chr3_2 exon 9783760 9783854 9783760 ID=Msa0394690-mRNA-1:exon:2562;Parent=Msa0394690-mRNA-1
chr3_2 exon 9784434 9784478 9784434 ID=Msa0394690-mRNA-1:exon:2561;Parent=Msa0394690-mRNA-1
chr3_2 exon 9784557 9784625 9784557 ID=Msa0394690-mRNA-1:exon:2560;Parent=Msa0394690-mRNA-1
chr3_2 exon 9784704 9784766 9784704 ID=Msa0394690-mRNA-1:exon:2559;Parent=Msa0394690-mRNA-1
chr3_2 exon 9784860 9784931 9784860 ID=Msa0394690-mRNA-1:exon:2558;Parent=Msa0394690-mRNA-1
chr3_2 exon 9785152 9785208 9785152 ID=Msa0394690-mRNA-1:exon:2557;Parent=Msa0394690-mRNA-1
chr3_2 exon 9785281 9787493 9785281 ID=Msa0394690-mRNA-1:exon:2556;Parent=Msa0394690-mRNA-1
chr3_2 exon 9792358 9792546 9792358 ID=Msa0394690-mRNA-1:exon:2555;Parent=Msa0394690-mRNA-1
chr3_2 five_prime_UTR 9792358 9792546 9792358 ID=Msa0394690-mRNA-1:five_prime_utr;Parent=Msa0394690-mRNA-1
chr3_2 five_prime_UTR 9787459 9787493 9787459 ID=Msa0394690-mRNA-1:five_prime_utr;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9785281 9787458 9785281 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9785152 9785208 9785152 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9784860 9784931 9784860 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9784704 9784766 9784704 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9784557 9784625 9784557 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9784434 9784478 9784434 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9783760 9783854 9783760 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
chr3_2 CDS 9783631 9783664 9783631 ID=Msa0394690-mRNA-1:cds;Parent=Msa0394690-mRNA-1
Gene Sequence

>Msa0394690

ATGGATATAGATCTCAGGTTACCCACTGGTGAACATGAGAAAGAAGAAGAAGAAGAAGAAGAAACAACTGCACTTGATAACATGTTGGAAGGTGAAGAAAAATTGCACAATGGAGGTATGGACGACAGACATATGGTTGAAGCTGGTATTGAGGTACATGCTCTAAATGGTGGAGATCTGAATTCCCCCACAGTTGATATTGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGTATGGAATTCGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGATCAATGGGATTCAACACTGCAATACAAAATAGTCGCCGTTCAAAAACCTCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGTGAGTACGATAAATCCTTCAACCGACCACGAGCTCGACAGAACAAGCAAGAATCTGAAAATTCAACTGGTCGAAGATCTTGCTCTAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCAAGATGGGAAATGGGTTATTCATAGCTTTGTGAAGGAGCATAATCACGAACTTTTACCAGCCCAGGCAGTAAGTGAACAAACAAGAAGAATGTATGCTGTGATGGCCAGGCAGTTTGCAGAATACAAAACTGTGGTTGGTATCAAGAATGAAAAGAATCCATTCGATAAAGTTCGTAATTTGGGTCTGGAGTTTGGGGAGGCTAAACTTATGCTTGATTTTTTTATTCAGATGCAAAGTATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAGGATCAACGGCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTCTCTGATGTAGTGTCATTTGATACGACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGGGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCGCAACATATTCTTGGCTATTACAGACATGGCTGAAAGGTGTAGGTGGTCAAGTTCCAAAAGTGATAATTACTGACCATGACATGACTTTGAAATCGGTTATTTCAGATGTATTTCCTAGTGCTTGCCATTGTATTTGCTTATGGCATATACTGGGGAAGGTATCTGAAAATTTAGCTCCTGTAATTAAAAAAAATGAGAATTTTATGGCAAAGTTTGAGAAATGCATATATAGGTCATTGACAAGTGATGATTTTGACAATAGATGGGAGAAAATTTTGGATAGATTTGAGCTTCGACAGGATGAATGCATGCAGTCTTTGTATGAAGATCGCAAGTTATGGGCACCAACATTCATGAAGGATGTGTTCTTAGGTGGCATGTCTACTGCCCAACGATCTGAAAGTGTCAATTCCTTCTTTGACAAATATGTTCATAGGAAGACCTATGTGCAAGATTTTGTTAAACAGTATGAAACCATCTTGCAGGACAGGTATGAAGAGGAGGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTGAAAACTCCTTCACCTTTAGAAAAGAGTGTTGCAGGGATTTGCACCCATACAGTATTCAAGAAGATCCAAGCTGAGATTATTGGTGCAGTGGCTTGTCATCCTAAACTTGACAGGCAGGATGAGACAAACGTTGTTCACAGGGTGCATGATATGGAAATAAACAGAGACTTTTTTGTCGTGGTGAATGAAGTAAAATCAGAGGTGTCTTGTATATGTCGGCTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGGTGGTTCTTCAATATTCTGGCCATTCAGTGTTCCCATCTCAATATGTTTTGAAACGATGGACAAAAGATGCAAAAGTCAGGAATGTCACGGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGATACAATGATTTATGTCATCGATCACTAAAATTGAGCGAAGAGGGATCATTGTCTCAAGATAGTTATAGTATTGCATTCCATGCACTAAATGAGGCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGCAAGAGTCCTACAGAAGCTGGTACATCAGGGGCTCATGGTCAGCTTTCCATTGAAGAAGATACCCAAAGTAGAAATATGGGAAAGTCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTGAACTCGGAGGCAGAAGTGATGAATGTTGGGGCACTAGACAACATGCAACAAATGGACAAATTCAGCACAAGAACTGCAGTAACCCTCGAAGGTTATTATGGTGCGCAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACACGTGATGATTACTACGGGAATCAACAGACTCTTCAAGGACTTGGACCAATGAATTCCATACCAACCAGCCACGATGGTTATTATGGTGCACATCAAAGCATGCCTGGTTTGGCACAACTGGATTTCTTGCGAACTGGTTTCGCATACAGCATTAGGGCTAGGAAAATGAGGACTTTGAGCTGCTCATCTGATGTAGAGAATGGAATACCTCAAAGGCCAATTGAGGTTATGTTGGCAAATCTCCAAGGCCAGTGGGGTAAGGCTTCAGAATTCAACCTCATGTAG

Protein sequence

>Msa0394690

MDIDLRLPTGEHEKEEEEEEETTALDNMLEGEEKLHNGGMDDRHMVEAGIEVHALNGGDLNSPTVDIAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRQDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAVMARQFAEYKTVVGIKNEKNPFDKVRNLGLEFGEAKLMLDFFIQMQSMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFSDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAATYSWLLQTWLKGVGGQVPKVIITDHDMTLKSVISDVFPSACHCICLWHILGKVSENLAPVIKKNENFMAKFEKCIYRSLTSDDFDNRWEKILDRFELRQDECMQSLYEDRKLWAPTFMKDVFLGGMSTAQRSESVNSFFDKYVHRKTYVQDFVKQYETILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGICTHTVFKKIQAEIIGAVACHPKLDRQDETNVVHRVHDMEINRDFFVVVNEVKSEVSCICRLFEYKGYLCRHALVVLQYSGHSVFPSQYVLKRWTKDAKVRNVTGEESEHMLARVQRYNDLCHRSLKLSEEGSLSQDSYSIAFHALNEAHKSCVSVNNSSKSPTEAGTSGAHGQLSIEEDTQSRNMGKSNKKKNPTKKKKVNSEAEVMNVGALDNMQQMDKFSTRTAVTLEGYYGAQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPMNSIPTSHDGYYGAHQSMPGLAQLDFLRTGFAYSIRARKMRTLSCSSDVENGIPQRPIEVMLANLQGQWGKASEFNLM*