AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0155480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0155480 MtrunA17_Chr1g0166241 95.238 357 14 2 1 354 1 357 0.0 690
Msa0155480 MtrunA17_Chr1g0188091 57.812 384 125 11 1 349 1 382 2.82e-132 382
Msa0155480 MtrunA17_Chr7g0260551 45.232 367 170 11 4 354 5 356 1.84e-91 278
Msa0155480 MtrunA17_Chr1g0184881 47.139 367 153 11 4 352 5 348 4.99e-89 271
Msa0155480 MtrunA17_Chr4g0075591 35.648 216 117 5 60 272 41 237 4.60e-36 132
Msa0155480 MtrunA17_Chr8g0384101 40.845 142 77 1 153 287 82 223 5.07e-36 131
Msa0155480 MtrunA17_Chr7g0251511 36.889 225 109 8 64 273 50 256 3.38e-35 131
Msa0155480 MtrunA17_Chr4g0075611 40.602 133 79 0 155 287 138 270 2.53e-34 128
Msa0155480 MtrunA17_Chr2g0289701 43.478 138 74 1 161 298 142 275 1.43e-33 126
Msa0155480 MtrunA17_Chr2g0282301 41.732 127 68 2 153 273 143 269 1.49e-32 124
Msa0155480 MtrunA17_Chr4g0040171 39.683 126 67 2 153 270 119 243 7.52e-30 115
Msa0155480 MtrunA17_Chr4g0047231 37.008 127 74 2 153 273 149 275 2.08e-29 115
Msa0155480 MtrunA17_Chr4g0047221 37.008 127 74 2 153 273 202 328 7.10e-29 115
Msa0155480 MtrunA17_Chr8g0339051 30.417 240 128 8 51 273 41 258 2.52e-28 112
Msa0155480 MtrunA17_Chr2g0282311 29.609 179 117 3 109 278 96 274 1.36e-27 110
Msa0155480 MtrunA17_Chr7g0234691 30.396 227 126 8 61 274 91 298 9.19e-27 108
Msa0155480 MtrunA17_Chr5g0396281 35.484 124 74 1 153 270 97 220 2.58e-24 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0155480 AT3G22970.1 50.133 375 154 9 4 354 5 370 2.69e-107 319
Msa0155480 AT4G14620.1 51.105 362 140 14 4 352 2 339 1.38e-96 290
Msa0155480 AT2G38820.2 44.375 320 146 8 4 306 5 309 1.79e-85 261
Msa0155480 AT3G22970.2 52.400 250 93 5 118 354 23 259 3.05e-75 233
Msa0155480 AT3G54550.1 42.238 277 136 8 5 272 6 267 1.14e-61 199
Msa0155480 AT2G38820.1 40.722 194 94 5 4 184 5 190 1.65e-35 129
Msa0155480 AT3G07350.1 32.677 254 148 6 51 290 34 278 5.67e-35 130
Msa0155480 AT2G39650.2 43.089 123 64 1 157 273 52 174 1.48e-31 119
Msa0155480 AT2G39650.1 43.089 123 64 1 157 273 114 236 3.10e-31 120
Msa0155480 AT3G25240.1 40.000 150 82 2 132 273 93 242 5.54e-31 119
Msa0155480 AT4G32480.1 40.984 122 66 2 157 272 120 241 2.85e-28 112
Msa0155480 AT1G62420.1 31.163 215 120 6 64 272 38 230 4.76e-28 111
Msa0155480 AT2G20670.1 40.351 114 62 1 165 272 130 243 8.21e-27 108
Msa0155480 AT1G77160.1 31.492 181 103 3 118 277 42 222 4.19e-26 105
Msa0155480 AT1G77145.1 35.616 146 76 2 150 277 72 217 4.27e-26 105
Msa0155480 AT1G77160.2 35.616 146 76 2 150 277 22 167 4.94e-26 103
Msa0155480 AT1G12030.1 38.938 113 68 1 161 272 118 230 1.10e-24 102
Msa0155480 AT1G77145.2 34.400 125 72 1 186 300 59 183 1.91e-20 88.6

Find 104 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTTTGCTTGGCGAAAA+TGG 0.121680 1_4:-20849426 Msa0155480:CDS
GTCAACAATGATCTGATTTC+TGG 0.126621 1_4:-20848004 Msa0155480:three_prime_UTR
CATCCATTTGCAAATCAAAA+TGG 0.188560 1_4:-20849004 Msa0155480:CDS
AATATTGAGAAGAAGATTAA+TGG 0.269219 1_4:-20849624 Msa0155480:exon
TCTTTAGTGGTATTGTTCTT+TGG 0.272861 1_4:+20849482 None:intergenic
AGACGAGCATTGTTAATTTC+CGG 0.316405 1_4:+20849886 None:intergenic
TTCTCTGAATCTATGTCAAT+TGG 0.321455 1_4:+20849584 None:intergenic
TTCAACCTCCACTTCGAAAC+TGG 0.330861 1_4:+20849533 None:intergenic
TAAAGAGAAAATTTCGGATA+AGG 0.343195 1_4:-20848288 Msa0155480:three_prime_UTR
AAAGTTATGGTTAGAAGAAA+AGG 0.343989 1_4:+20849829 None:intergenic
GCCGCATCGGAGACTTGCTT+TGG 0.348894 1_4:+20848592 None:intergenic
CTTCTAGGCTAAGAAAGTTA+TGG 0.360468 1_4:+20849816 None:intergenic
TCGGAGGTGGATAGTGATTC+TGG 0.369464 1_4:-20848550 Msa0155480:CDS
TTCAAATTCAAATTAAACTT+TGG 0.377537 1_4:+20848070 None:intergenic
GAGTCCAGCGTGGCAGTTAC+CGG 0.378357 1_4:-20848455 Msa0155480:CDS
GATTGGATTCCTTAAGGATA+TGG 0.397537 1_4:-20848026 Msa0155480:three_prime_UTR
GTGGTATTGTTCTTTGGAAA+AGG 0.402629 1_4:+20849488 None:intergenic
TCACACATATCACACTAGTT+TGG 0.409243 1_4:+20848047 None:intergenic
ATCCATTTGCAAATCAAAAT+GGG 0.412073 1_4:-20849003 Msa0155480:CDS
TCAACAATGATCTGATTTCT+GGG 0.414981 1_4:-20848003 Msa0155480:three_prime_UTR
CATTGTTGACCATATCCTTA+AGG 0.422111 1_4:+20848017 None:intergenic
ATTCCTCTTTCACCACTCTT+CGG 0.422133 1_4:+20848424 None:intergenic
TCCACCACCACCATCTTTAG+TGG 0.439948 1_4:+20849469 None:intergenic
AGTCTCCGATGCGGCGGCGG+TGG 0.440423 1_4:-20848584 Msa0155480:CDS
GGATAGTGATTCTGGTGAAT+TGG 0.451879 1_4:-20848542 Msa0155480:CDS
TTCGCCAAGCAAACAGAGCT+TGG 0.466708 1_4:+20849431 None:intergenic
CTTGAGTGAGTCAGTTGAAT+CGG 0.467555 1_4:+20849271 None:intergenic
AAAACAAATTCTTGTCCTGC+TGG 0.468712 1_4:-20848978 Msa0155480:intron
AATTCAAATTAAACTTTGGA+TGG 0.470357 1_4:+20848074 None:intergenic
GGAACCAAGCTCTGTTTGCT+TGG 0.476354 1_4:-20849435 Msa0155480:CDS
AGAGAAAGCCACTACGGAAC+TGG 0.478102 1_4:-20849567 Msa0155480:CDS
TTGTTAATTTCCGGTGAAGC+CGG 0.481237 1_4:+20849895 None:intergenic
ATGTGTGATTGGATTCCTTA+AGG 0.481577 1_4:-20848032 Msa0155480:three_prime_UTR
CCACTCTTCGGTTTCACCGC+CGG 0.488504 1_4:+20848436 None:intergenic
TTAGAAGAAAAGGAGTTTCG+TGG 0.491815 1_4:+20849839 None:intergenic
CTGAATCTATGTCAATTGGT+TGG 0.492657 1_4:+20849588 None:intergenic
AGAATAGCAAAATTTACAAA+AGG 0.494795 1_4:-20849082 Msa0155480:CDS
GCAAGTCTCCGATGCGGCGG+CGG 0.496129 1_4:-20848587 Msa0155480:CDS
CGTCACCGTCGTGTCGGAGG+CGG 0.500832 1_4:-20848710 Msa0155480:CDS
CGAGACGGTGGTTGAAGTTG+CGG 0.502860 1_4:+20849374 None:intergenic
AAGAACAATACCACTAAAGA+TGG 0.505083 1_4:-20849479 Msa0155480:CDS
GAGTGGTGAAAGAGGAATGA+AGG 0.505285 1_4:-20848419 Msa0155480:CDS
GGAGAAAGCTTCACCGGAGG+AGG 0.509314 1_4:-20848503 Msa0155480:CDS
TGGATTAGCTTCTTTGCTGA+AGG 0.511501 1_4:-20848392 Msa0155480:CDS
TGGTGGTGGAGTTGCTGAGT+TGG 0.512259 1_4:-20849456 Msa0155480:CDS
TGCTTTGGCCTAGCTGCCGA+CGG 0.512808 1_4:+20848607 None:intergenic
TTCACCGGAGGAGGTAGTTA+CGG 0.516177 1_4:-20848494 Msa0155480:CDS
ACCACTAAAGATGGTGGTGG+TGG 0.516726 1_4:-20849470 Msa0155480:CDS
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_4:-20848685 Msa0155480:CDS
TGGTGAGGAGAAAGCTTCAC+CGG 0.521029 1_4:-20848509 Msa0155480:CDS
ACCGCCGGTAACTGCCACGC+TGG 0.521213 1_4:+20848451 None:intergenic
GAAGACATGACGACGGTGAT+CGG 0.524244 1_4:+20849861 None:intergenic
GGATCTCTCCGTCGGCAGCT+AGG 0.526135 1_4:-20848615 Msa0155480:CDS
GAAAATGGTTCAGAGTTTCA+TGG 0.527012 1_4:-20849411 Msa0155480:CDS
ACTAGTGTGATATGTGTGAT+TGG 0.527155 1_4:-20848043 Msa0155480:three_prime_UTR
TGTTTCCACCGCCGCCGCAT+CGG 0.530760 1_4:+20848579 None:intergenic
GGAAACAGTTTCATCGGAGG+TGG 0.532775 1_4:-20848563 Msa0155480:CDS
AGCCGGAAAATTCATATCTC+CGG 0.533667 1_4:+20849912 None:intergenic
GGTGGTTGAAGTTGCGGTTG+CGG 0.536574 1_4:+20849380 None:intergenic
TCAATTCATTGATGCGATTG+TGG 0.553988 1_4:-20848866 Msa0155480:CDS
AAACCGAAGAGTGGTGAAAG+AGG 0.554832 1_4:-20848427 Msa0155480:CDS
GAAAGAGGAATGAAGGTGAC+TGG 0.556629 1_4:-20848412 Msa0155480:CDS
TTTCGAAGTGGAGGTTGAAG+AGG 0.556890 1_4:-20849529 Msa0155480:CDS
GCGGAAAAGCTTCAATCTCT+CGG 0.559601 1_4:-20849035 Msa0155480:CDS
GGCGGTGGAAACAGTTTCAT+CGG 0.562645 1_4:-20848569 Msa0155480:CDS
GCCGCCGTAACTACCTCCTC+CGG 0.562947 1_4:+20848490 None:intergenic
CGTTCTTCAACACTTACACA+AGG 0.565445 1_4:+20849140 None:intergenic
GAAGATGATTTCGATTTCAA+CGG 0.567151 1_4:-20849314 Msa0155480:CDS
CTTGTGTAAGTGTTGAAGAA+CGG 0.570166 1_4:-20849139 Msa0155480:CDS
TCAATTGGTTGGATCTTCAA+CGG 0.580989 1_4:+20849599 None:intergenic
ATGTAATCGCGCTTCCTCCA+CGG 0.582747 1_4:+20848649 None:intergenic
TTCATTGATGCGATTGTGGA+AGG 0.586622 1_4:-20848862 Msa0155480:CDS
ATGAACCAGTTTCGAAGTGG+AGG 0.593261 1_4:-20849538 Msa0155480:CDS
GATCGTCACCGTCGTGTCGG+AGG 0.603839 1_4:-20848713 Msa0155480:CDS
ATTTCGAACCAGTTCCGTAG+TGG 0.603877 1_4:+20849559 None:intergenic
GCAGATCGTCACCGTCGTGT+CGG 0.612036 1_4:-20848716 Msa0155480:CDS
CGATTCAACTGACTCACTCA+AGG 0.613617 1_4:-20849270 Msa0155480:intron
AGATTCAGAGAAAGCCACTA+CGG 0.617727 1_4:-20849573 Msa0155480:CDS
AGCGAAGTGGATCTCTCCGT+CGG 0.622895 1_4:-20848623 Msa0155480:CDS
AAAGCAAGTCTCCGATGCGG+CGG 0.623703 1_4:-20848590 Msa0155480:CDS
AGATTTGATTAAGATCGTTG+CGG 0.624397 1_4:-20849054 Msa0155480:CDS
GAATGCATGTTCCGCCGTGG+AGG 0.625206 1_4:-20848663 Msa0155480:CDS
GAAATCGAAATCATCTTCGT+CGG 0.627970 1_4:+20849319 None:intergenic
GAAATGAACCAGTTTCGAAG+TGG 0.634899 1_4:-20849541 Msa0155480:CDS
AACAATACCACTAAAGATGG+TGG 0.638792 1_4:-20849476 Msa0155480:CDS
CTTCGCCGCCTCCGACACGA+CGG 0.649693 1_4:+20848705 None:intergenic
GCGATTACATGTTAGCGAAG+TGG 0.650775 1_4:-20848636 Msa0155480:CDS
AGTTACGGCGGCGACAGCGA+CGG 0.655061 1_4:-20848479 Msa0155480:CDS
TCCAGCGTGGCAGTTACCGG+CGG 0.657779 1_4:-20848452 Msa0155480:CDS
CAGTTGCAGCGGTTACGAGA+CGG 0.659954 1_4:+20849359 None:intergenic
CCGGCGGTGAAACCGAAGAG+TGG 0.661349 1_4:-20848436 Msa0155480:CDS
TAGCGTTGAAACAGTTGCAG+CGG 0.661984 1_4:+20849348 None:intergenic
AATACCACTAAAGATGGTGG+TGG 0.666485 1_4:-20849473 Msa0155480:CDS
AAGGAATGCATGTTCCGCCG+TGG 0.669326 1_4:-20848666 Msa0155480:CDS
GAGTGAGTCAGTTGAATCGG+TGG 0.677492 1_4:+20849274 None:intergenic
GAAAATTCATATCTCCGGCG+AGG 0.678693 1_4:+20849917 None:intergenic
GGTGGAAACAGTTTCATCGG+AGG 0.697111 1_4:-20848566 Msa0155480:CDS
ACCGGAGGAGGTAGTTACGG+CGG 0.700864 1_4:-20848491 Msa0155480:CDS
TTGCAGCGGTTACGAGACGG+TGG 0.718582 1_4:+20849362 None:intergenic
GCCAAAGCAAGTCTCCGATG+CGG 0.718766 1_4:-20848593 Msa0155480:CDS
TGAGGAGAAAGCTTCACCGG+AGG 0.732130 1_4:-20848506 Msa0155480:CDS
CAGCGACGGTGAGTCCAGCG+TGG 0.734694 1_4:-20848465 Msa0155480:CDS
TTTCGTGGAAGACATGACGA+CGG 0.761807 1_4:+20849854 None:intergenic
TAATCGCGCTTCCTCCACGG+CGG 0.770748 1_4:+20848652 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAGAGAAAATTT+CGG - chr1_4:20849661-20849680 Msa0155480:five_prime_UTR 10.0%
!! AAAAATTAAAGAGAAAATTT+CGG - chr1_4:20849661-20849680 Msa0155480:five_prime_UTR 10.0%
!!! AAGTTTTTTTTTTTATGTGT+TGG + chr1_4:20847994-20848013 None:intergenic 15.0%
!!! TAATTTTTTTTTTCTCTTCT+AGG + chr1_4:20848157-20848176 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG + chr1_4:20849594-20849613 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG + chr1_4:20849888-20849907 None:intergenic 15.0%
!!! AAGTTTTTTTTTTTATGTGT+TGG + chr1_4:20847994-20848013 None:intergenic 15.0%
!!! TAATTTTTTTTTTCTCTTCT+AGG + chr1_4:20848157-20848176 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG + chr1_4:20849594-20849613 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG + chr1_4:20849888-20849907 None:intergenic 15.0%
!! AATATTGAGAAGAAGATTAA+TGG - chr1_4:20848331-20848350 Msa0155480:three_prime_UTR 20.0%
!! AGAATAGCAAAATTTACAAA+AGG - chr1_4:20848873-20848892 Msa0155480:CDS 20.0%
!!! ATCGTTTTTTGTTTTGTTTT+AGG - chr1_4:20849060-20849079 Msa0155480:CDS 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG - chr1_4:20849785-20849804 Msa0155480:five_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG + chr1_4:20849884-20849903 None:intergenic 20.0%
!! AATATTGAGAAGAAGATTAA+TGG - chr1_4:20848331-20848350 Msa0155480:three_prime_UTR 20.0%
!! AGAATAGCAAAATTTACAAA+AGG - chr1_4:20848873-20848892 Msa0155480:CDS 20.0%
!!! ATCGTTTTTTGTTTTGTTTT+AGG - chr1_4:20849060-20849079 Msa0155480:CDS 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG - chr1_4:20849785-20849804 Msa0155480:five_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG + chr1_4:20849884-20849903 None:intergenic 20.0%
! AAAGTTATGGTTAGAAGAAA+AGG + chr1_4:20848129-20848148 None:intergenic 25.0%
! ATCCATTTGCAAATCAAAAT+GGG - chr1_4:20848952-20848971 Msa0155480:intron 25.0%
!!! TATTGATATCGATTTTCGAT+CGG - chr1_4:20849128-20849147 Msa0155480:CDS 25.0%
!!! TCTTTTTTCTTTTTTGATCG+TGG - chr1_4:20849624-20849643 Msa0155480:exon 25.0%
! TAAAGAGAAAATTTCGGATA+AGG - chr1_4:20849667-20849686 Msa0155480:five_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTAACA+AGG - chr1_4:20849732-20849751 Msa0155480:five_prime_UTR 25.0%
! TCCTTGTTAACAAAAAAACA+AGG + chr1_4:20849736-20849755 None:intergenic 25.0%
! AAAGTTATGGTTAGAAGAAA+AGG + chr1_4:20848129-20848148 None:intergenic 25.0%
! ATCCATTTGCAAATCAAAAT+GGG - chr1_4:20848952-20848971 Msa0155480:intron 25.0%
!!! TATTGATATCGATTTTCGAT+CGG - chr1_4:20849128-20849147 Msa0155480:CDS 25.0%
!!! TCTTTTTTCTTTTTTGATCG+TGG - chr1_4:20849624-20849643 Msa0155480:exon 25.0%
! TAAAGAGAAAATTTCGGATA+AGG - chr1_4:20849667-20849686 Msa0155480:five_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTAACA+AGG - chr1_4:20849732-20849751 Msa0155480:five_prime_UTR 25.0%
! TCCTTGTTAACAAAAAAACA+AGG + chr1_4:20849736-20849755 None:intergenic 25.0%
! TTTTTCGTACAAGAGAGTTT+TGG + chr1_4:20847956-20847975 None:intergenic 30.0%
TTCTCTGAATCTATGTCAAT+TGG + chr1_4:20848374-20848393 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+TGG + chr1_4:20848476-20848495 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG - chr1_4:20848476-20848495 Msa0155480:CDS 30.0%
GAAGATGATTTCGATTTCAA+CGG - chr1_4:20848641-20848660 Msa0155480:CDS 30.0%
AGATTTGATTAAGATCGTTG+CGG - chr1_4:20848901-20848920 Msa0155480:intron 30.0%
CATCCATTTGCAAATCAAAA+TGG - chr1_4:20848951-20848970 Msa0155480:intron 30.0%
TTAGAGAATTAATTACCAGC+AGG + chr1_4:20848995-20849014 None:intergenic 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG - chr1_4:20849793-20849812 Msa0155480:five_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG - chr1_4:20849952-20849971 Msa0155480:five_prime_UTR 30.0%
! TTTTTCGTACAAGAGAGTTT+TGG + chr1_4:20847956-20847975 None:intergenic 30.0%
TTCTCTGAATCTATGTCAAT+TGG + chr1_4:20848374-20848393 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+TGG + chr1_4:20848476-20848495 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG - chr1_4:20848476-20848495 Msa0155480:CDS 30.0%
GAAGATGATTTCGATTTCAA+CGG - chr1_4:20848641-20848660 Msa0155480:CDS 30.0%
AGATTTGATTAAGATCGTTG+CGG - chr1_4:20848901-20848920 Msa0155480:intron 30.0%
CATCCATTTGCAAATCAAAA+TGG - chr1_4:20848951-20848970 Msa0155480:intron 30.0%
TTAGAGAATTAATTACCAGC+AGG + chr1_4:20848995-20849014 None:intergenic 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG - chr1_4:20849793-20849812 Msa0155480:five_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG - chr1_4:20849952-20849971 Msa0155480:five_prime_UTR 30.0%
AAGAAATCAAAAAACCTCGC+CGG - chr1_4:20848024-20848043 Msa0155480:three_prime_UTR 35.0%
! AGACGAGCATTGTTAATTTC+CGG + chr1_4:20848072-20848091 None:intergenic 35.0%
TTAGAAGAAAAGGAGTTTCG+TGG + chr1_4:20848119-20848138 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG + chr1_4:20848142-20848161 None:intergenic 35.0%
TCAATTGGTTGGATCTTCAA+CGG + chr1_4:20848359-20848378 None:intergenic 35.0%
CTGAATCTATGTCAATTGGT+TGG + chr1_4:20848370-20848389 None:intergenic 35.0%
! GTGGTATTGTTCTTTGGAAA+AGG + chr1_4:20848470-20848489 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG - chr1_4:20848479-20848498 Msa0155480:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG - chr1_4:20848544-20848563 Msa0155480:CDS 35.0%
GAAATCGAAATCATCTTCGT+CGG + chr1_4:20848639-20848658 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG - chr1_4:20848816-20848835 Msa0155480:CDS 35.0%
!!! CTCCCATTTTGATTTGCAAA+TGG + chr1_4:20848957-20848976 None:intergenic 35.0%
AAAACAAATTCTTGTCCTGC+TGG - chr1_4:20848977-20848996 Msa0155480:intron 35.0%
TCAATTCATTGATGCGATTG+TGG - chr1_4:20849089-20849108 Msa0155480:CDS 35.0%
! CTTTTGCCGACGAAAATATA+CGG + chr1_4:20849207-20849226 None:intergenic 35.0%
! GTATATTTTCGTCGGCAAAA+GGG - chr1_4:20849206-20849225 Msa0155480:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_4:20849270-20849289 Msa0155480:intron 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG + chr1_4:20849798-20849817 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG - chr1_4:20849808-20849827 Msa0155480:five_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG + chr1_4:20849911-20849930 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG - chr1_4:20849912-20849931 Msa0155480:five_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG - chr1_4:20849923-20849942 Msa0155480:five_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG - chr1_4:20849929-20849948 Msa0155480:five_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG + chr1_4:20849941-20849960 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG - chr1_4:20849951-20849970 Msa0155480:five_prime_UTR 35.0%
AAGAAATCAAAAAACCTCGC+CGG - chr1_4:20848024-20848043 Msa0155480:three_prime_UTR 35.0%
! AGACGAGCATTGTTAATTTC+CGG + chr1_4:20848072-20848091 None:intergenic 35.0%
TTAGAAGAAAAGGAGTTTCG+TGG + chr1_4:20848119-20848138 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG + chr1_4:20848142-20848161 None:intergenic 35.0%
TCAATTGGTTGGATCTTCAA+CGG + chr1_4:20848359-20848378 None:intergenic 35.0%
CTGAATCTATGTCAATTGGT+TGG + chr1_4:20848370-20848389 None:intergenic 35.0%
! GTGGTATTGTTCTTTGGAAA+AGG + chr1_4:20848470-20848489 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG - chr1_4:20848479-20848498 Msa0155480:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG - chr1_4:20848544-20848563 Msa0155480:CDS 35.0%
GAAATCGAAATCATCTTCGT+CGG + chr1_4:20848639-20848658 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG - chr1_4:20848816-20848835 Msa0155480:CDS 35.0%
!!! CTCCCATTTTGATTTGCAAA+TGG + chr1_4:20848957-20848976 None:intergenic 35.0%
AAAACAAATTCTTGTCCTGC+TGG - chr1_4:20848977-20848996 Msa0155480:intron 35.0%
TCAATTCATTGATGCGATTG+TGG - chr1_4:20849089-20849108 Msa0155480:CDS 35.0%
! CTTTTGCCGACGAAAATATA+CGG + chr1_4:20849207-20849226 None:intergenic 35.0%
! GTATATTTTCGTCGGCAAAA+GGG - chr1_4:20849206-20849225 Msa0155480:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_4:20849270-20849289 Msa0155480:intron 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG + chr1_4:20849798-20849817 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG - chr1_4:20849808-20849827 Msa0155480:five_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG + chr1_4:20849911-20849930 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG - chr1_4:20849912-20849931 Msa0155480:five_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG - chr1_4:20849923-20849942 Msa0155480:five_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG - chr1_4:20849929-20849948 Msa0155480:five_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG + chr1_4:20849941-20849960 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG - chr1_4:20849951-20849970 Msa0155480:five_prime_UTR 35.0%
AGCCGGAAAATTCATATCTC+CGG + chr1_4:20848046-20848065 None:intergenic 40.0%
! TATGAATTTTCCGGCTTCAC+CGG - chr1_4:20848050-20848069 Msa0155480:three_prime_UTR 40.0%
TTGTTAATTTCCGGTGAAGC+CGG + chr1_4:20848063-20848082 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG - chr1_4:20848382-20848401 Msa0155480:CDS 40.0%
GAAATGAACCAGTTTCGAAG+TGG - chr1_4:20848414-20848433 Msa0155480:CDS 40.0%
! AATACCACTAAAGATGGTGG+TGG - chr1_4:20848482-20848501 Msa0155480:CDS 40.0%
CTTGAGTGAGTCAGTTGAAT+CGG + chr1_4:20848687-20848706 None:intergenic 40.0%
CGTTCTTCAACACTTACACA+AGG + chr1_4:20848818-20848837 None:intergenic 40.0%
TTCATTGATGCGATTGTGGA+AGG - chr1_4:20849093-20849112 Msa0155480:CDS 40.0%
! TCGCTTCCGTATATTTTCGT+CGG - chr1_4:20849198-20849217 Msa0155480:intron 40.0%
! CGTATATTTTCGTCGGCAAA+AGG - chr1_4:20849205-20849224 Msa0155480:intron 40.0%
GGATAGTGATTCTGGTGAAT+TGG - chr1_4:20849413-20849432 Msa0155480:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG - chr1_4:20849426-20849445 Msa0155480:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG - chr1_4:20849431-20849450 Msa0155480:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG + chr1_4:20849534-20849553 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG - chr1_4:20849563-20849582 Msa0155480:CDS 40.0%
AGCCGGAAAATTCATATCTC+CGG + chr1_4:20848046-20848065 None:intergenic 40.0%
! TATGAATTTTCCGGCTTCAC+CGG - chr1_4:20848050-20848069 Msa0155480:three_prime_UTR 40.0%
TTGTTAATTTCCGGTGAAGC+CGG + chr1_4:20848063-20848082 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG - chr1_4:20848382-20848401 Msa0155480:CDS 40.0%
GAAATGAACCAGTTTCGAAG+TGG - chr1_4:20848414-20848433 Msa0155480:CDS 40.0%
! AATACCACTAAAGATGGTGG+TGG - chr1_4:20848482-20848501 Msa0155480:CDS 40.0%
CTTGAGTGAGTCAGTTGAAT+CGG + chr1_4:20848687-20848706 None:intergenic 40.0%
CGTTCTTCAACACTTACACA+AGG + chr1_4:20848818-20848837 None:intergenic 40.0%
TTCATTGATGCGATTGTGGA+AGG - chr1_4:20849093-20849112 Msa0155480:CDS 40.0%
! TCGCTTCCGTATATTTTCGT+CGG - chr1_4:20849198-20849217 Msa0155480:intron 40.0%
! CGTATATTTTCGTCGGCAAA+AGG - chr1_4:20849205-20849224 Msa0155480:intron 40.0%
GGATAGTGATTCTGGTGAAT+TGG - chr1_4:20849413-20849432 Msa0155480:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG - chr1_4:20849426-20849445 Msa0155480:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG - chr1_4:20849431-20849450 Msa0155480:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG + chr1_4:20849534-20849553 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG - chr1_4:20849563-20849582 Msa0155480:CDS 40.0%
GAAAATTCATATCTCCGGCG+AGG + chr1_4:20848041-20848060 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG - chr1_4:20848041-20848060 Msa0155480:three_prime_UTR 45.0%
TTTCGTGGAAGACATGACGA+CGG + chr1_4:20848104-20848123 None:intergenic 45.0%
ATTTCGAACCAGTTCCGTAG+TGG + chr1_4:20848399-20848418 None:intergenic 45.0%
ATGAACCAGTTTCGAAGTGG+AGG - chr1_4:20848417-20848436 Msa0155480:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG + chr1_4:20848425-20848444 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG - chr1_4:20848426-20848445 Msa0155480:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG - chr1_4:20848529-20848548 Msa0155480:CDS 45.0%
! TAGCGTTGAAACAGTTGCAG+CGG + chr1_4:20848610-20848629 None:intergenic 45.0%
! CGATTCAACTGACTCACTCA+AGG - chr1_4:20848685-20848704 Msa0155480:CDS 45.0%
GCGGAAAAGCTTCAATCTCT+CGG - chr1_4:20848920-20848939 Msa0155480:intron 45.0%
! TTTTCGTCGGCAAAAGGGAA+CGG - chr1_4:20849211-20849230 Msa0155480:intron 45.0%
GCGATTACATGTTAGCGAAG+TGG - chr1_4:20849319-20849338 Msa0155480:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG - chr1_4:20849528-20849547 Msa0155480:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG - chr1_4:20849536-20849555 Msa0155480:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG - chr1_4:20849543-20849562 Msa0155480:CDS 45.0%
GAAAATTCATATCTCCGGCG+AGG + chr1_4:20848041-20848060 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG - chr1_4:20848041-20848060 Msa0155480:three_prime_UTR 45.0%
TTTCGTGGAAGACATGACGA+CGG + chr1_4:20848104-20848123 None:intergenic 45.0%
ATTTCGAACCAGTTCCGTAG+TGG + chr1_4:20848399-20848418 None:intergenic 45.0%
ATGAACCAGTTTCGAAGTGG+AGG - chr1_4:20848417-20848436 Msa0155480:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG + chr1_4:20848425-20848444 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG - chr1_4:20848426-20848445 Msa0155480:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG - chr1_4:20848529-20848548 Msa0155480:CDS 45.0%
! TAGCGTTGAAACAGTTGCAG+CGG + chr1_4:20848610-20848629 None:intergenic 45.0%
! CGATTCAACTGACTCACTCA+AGG - chr1_4:20848685-20848704 Msa0155480:CDS 45.0%
GCGGAAAAGCTTCAATCTCT+CGG - chr1_4:20848920-20848939 Msa0155480:intron 45.0%
! TTTTCGTCGGCAAAAGGGAA+CGG - chr1_4:20849211-20849230 Msa0155480:intron 45.0%
GCGATTACATGTTAGCGAAG+TGG - chr1_4:20849319-20849338 Msa0155480:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG - chr1_4:20849528-20849547 Msa0155480:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG - chr1_4:20849536-20849555 Msa0155480:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG - chr1_4:20849543-20849562 Msa0155480:CDS 45.0%
!!! TTTATTTTTGAAAATATTTT+TGG - chr1_4:20849701-20849720 Msa0155480:five_prime_UTR 5.0%
!!! TTTATTTTTGAAAATATTTT+TGG - chr1_4:20849701-20849720 Msa0155480:five_prime_UTR 5.0%
GAAGACATGACGACGGTGAT+CGG + chr1_4:20848097-20848116 None:intergenic 50.0%
AGAGAAAGCCACTACGGAAC+TGG - chr1_4:20848388-20848407 Msa0155480:CDS 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG - chr1_4:20848485-20848504 Msa0155480:CDS 50.0%
TCCACCACCACCATCTTTAG+TGG + chr1_4:20848489-20848508 None:intergenic 50.0%
GGAACCAAGCTCTGTTTGCT+TGG - chr1_4:20848520-20848539 Msa0155480:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG + chr1_4:20848527-20848546 None:intergenic 50.0%
GAGTGAGTCAGTTGAATCGG+TGG + chr1_4:20848684-20848703 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG + chr1_4:20849309-20849328 None:intergenic 50.0%
GGCGGTGGAAACAGTTTCAT+CGG - chr1_4:20849386-20849405 Msa0155480:CDS 50.0%
GGTGGAAACAGTTTCATCGG+AGG - chr1_4:20849389-20849408 Msa0155480:CDS 50.0%
GGAAACAGTTTCATCGGAGG+TGG - chr1_4:20849392-20849411 Msa0155480:CDS 50.0%
TCGGAGGTGGATAGTGATTC+TGG - chr1_4:20849405-20849424 Msa0155480:CDS 50.0%
TGGTGAGGAGAAAGCTTCAC+CGG - chr1_4:20849446-20849465 Msa0155480:CDS 50.0%
TTCACCGGAGGAGGTAGTTA+CGG - chr1_4:20849461-20849480 Msa0155480:CDS 50.0%
GAAGACATGACGACGGTGAT+CGG + chr1_4:20848097-20848116 None:intergenic 50.0%
AGAGAAAGCCACTACGGAAC+TGG - chr1_4:20848388-20848407 Msa0155480:CDS 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG - chr1_4:20848485-20848504 Msa0155480:CDS 50.0%
TCCACCACCACCATCTTTAG+TGG + chr1_4:20848489-20848508 None:intergenic 50.0%
GGAACCAAGCTCTGTTTGCT+TGG - chr1_4:20848520-20848539 Msa0155480:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG + chr1_4:20848527-20848546 None:intergenic 50.0%
GAGTGAGTCAGTTGAATCGG+TGG + chr1_4:20848684-20848703 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG + chr1_4:20849309-20849328 None:intergenic 50.0%
GGCGGTGGAAACAGTTTCAT+CGG - chr1_4:20849386-20849405 Msa0155480:CDS 50.0%
GGTGGAAACAGTTTCATCGG+AGG - chr1_4:20849389-20849408 Msa0155480:CDS 50.0%
GGAAACAGTTTCATCGGAGG+TGG - chr1_4:20849392-20849411 Msa0155480:CDS 50.0%
TCGGAGGTGGATAGTGATTC+TGG - chr1_4:20849405-20849424 Msa0155480:CDS 50.0%
TGGTGAGGAGAAAGCTTCAC+CGG - chr1_4:20849446-20849465 Msa0155480:CDS 50.0%
TTCACCGGAGGAGGTAGTTA+CGG - chr1_4:20849461-20849480 Msa0155480:CDS 50.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG - chr1_4:20848499-20848518 Msa0155480:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG + chr1_4:20848578-20848597 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG + chr1_4:20848584-20848603 None:intergenic 55.0%
CAGTTGCAGCGGTTACGAGA+CGG + chr1_4:20848599-20848618 None:intergenic 55.0%
AAGGAATGCATGTTCCGCCG+TGG - chr1_4:20849289-20849308 Msa0155480:CDS 55.0%
AGCGAAGTGGATCTCTCCGT+CGG - chr1_4:20849332-20849351 Msa0155480:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG - chr1_4:20849362-20849381 Msa0155480:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG - chr1_4:20849365-20849384 Msa0155480:CDS 55.0%
TGAGGAGAAAGCTTCACCGG+AGG - chr1_4:20849449-20849468 Msa0155480:CDS 55.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG - chr1_4:20848499-20848518 Msa0155480:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG + chr1_4:20848578-20848597 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG + chr1_4:20848584-20848603 None:intergenic 55.0%
CAGTTGCAGCGGTTACGAGA+CGG + chr1_4:20848599-20848618 None:intergenic 55.0%
AAGGAATGCATGTTCCGCCG+TGG - chr1_4:20849289-20849308 Msa0155480:CDS 55.0%
AGCGAAGTGGATCTCTCCGT+CGG - chr1_4:20849332-20849351 Msa0155480:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG - chr1_4:20849362-20849381 Msa0155480:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG - chr1_4:20849365-20849384 Msa0155480:CDS 55.0%
TGAGGAGAAAGCTTCACCGG+AGG - chr1_4:20849449-20849468 Msa0155480:CDS 55.0%
TTGCAGCGGTTACGAGACGG+TGG + chr1_4:20848596-20848615 None:intergenic 60.0%
GCAGATCGTCACCGTCGTGT+CGG - chr1_4:20849239-20849258 Msa0155480:intron 60.0%
GAATGCATGTTCCGCCGTGG+AGG - chr1_4:20849292-20849311 Msa0155480:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG + chr1_4:20849306-20849325 None:intergenic 60.0%
TGCTTTGGCCTAGCTGCCGA+CGG + chr1_4:20849351-20849370 None:intergenic 60.0%
! GCCGCATCGGAGACTTGCTT+TGG + chr1_4:20849366-20849385 None:intergenic 60.0%
GGAGAAAGCTTCACCGGAGG+AGG - chr1_4:20849452-20849471 Msa0155480:CDS 60.0%
ACCGGAGGAGGTAGTTACGG+CGG - chr1_4:20849464-20849483 Msa0155480:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG - chr1_4:20849500-20849519 Msa0155480:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG + chr1_4:20849522-20849541 None:intergenic 60.0%
TTGCAGCGGTTACGAGACGG+TGG + chr1_4:20848596-20848615 None:intergenic 60.0%
GCAGATCGTCACCGTCGTGT+CGG - chr1_4:20849239-20849258 Msa0155480:intron 60.0%
GAATGCATGTTCCGCCGTGG+AGG - chr1_4:20849292-20849311 Msa0155480:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG + chr1_4:20849306-20849325 None:intergenic 60.0%
TGCTTTGGCCTAGCTGCCGA+CGG + chr1_4:20849351-20849370 None:intergenic 60.0%
! GCCGCATCGGAGACTTGCTT+TGG + chr1_4:20849366-20849385 None:intergenic 60.0%
GGAGAAAGCTTCACCGGAGG+AGG - chr1_4:20849452-20849471 Msa0155480:CDS 60.0%
ACCGGAGGAGGTAGTTACGG+CGG - chr1_4:20849464-20849483 Msa0155480:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG - chr1_4:20849500-20849519 Msa0155480:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG + chr1_4:20849522-20849541 None:intergenic 60.0%
GATCGTCACCGTCGTGTCGG+AGG - chr1_4:20849242-20849261 Msa0155480:intron 65.0%
GGATCTCTCCGTCGGCAGCT+AGG - chr1_4:20849340-20849359 Msa0155480:CDS 65.0%
TGTTTCCACCGCCGCCGCAT+CGG + chr1_4:20849379-20849398 None:intergenic 65.0%
GCCGCCGTAACTACCTCCTC+CGG + chr1_4:20849468-20849487 None:intergenic 65.0%
AGTTACGGCGGCGACAGCGA+CGG - chr1_4:20849476-20849495 Msa0155480:CDS 65.0%
TCCAGCGTGGCAGTTACCGG+CGG - chr1_4:20849503-20849522 Msa0155480:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG - chr1_4:20849519-20849538 Msa0155480:CDS 65.0%
GATCGTCACCGTCGTGTCGG+AGG - chr1_4:20849242-20849261 Msa0155480:intron 65.0%
GGATCTCTCCGTCGGCAGCT+AGG - chr1_4:20849340-20849359 Msa0155480:CDS 65.0%
TGTTTCCACCGCCGCCGCAT+CGG + chr1_4:20849379-20849398 None:intergenic 65.0%
GCCGCCGTAACTACCTCCTC+CGG + chr1_4:20849468-20849487 None:intergenic 65.0%
AGTTACGGCGGCGACAGCGA+CGG - chr1_4:20849476-20849495 Msa0155480:CDS 65.0%
TCCAGCGTGGCAGTTACCGG+CGG - chr1_4:20849503-20849522 Msa0155480:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG - chr1_4:20849519-20849538 Msa0155480:CDS 65.0%
CGTCACCGTCGTGTCGGAGG+CGG - chr1_4:20849245-20849264 Msa0155480:intron 70.0%
CTTCGCCGCCTCCGACACGA+CGG + chr1_4:20849253-20849272 None:intergenic 70.0%
GCAAGTCTCCGATGCGGCGG+CGG - chr1_4:20849368-20849387 Msa0155480:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG - chr1_4:20849490-20849509 Msa0155480:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG + chr1_4:20849507-20849526 None:intergenic 70.0%
CGTCACCGTCGTGTCGGAGG+CGG - chr1_4:20849245-20849264 Msa0155480:intron 70.0%
CTTCGCCGCCTCCGACACGA+CGG + chr1_4:20849253-20849272 None:intergenic 70.0%
GCAAGTCTCCGATGCGGCGG+CGG - chr1_4:20849368-20849387 Msa0155480:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG - chr1_4:20849490-20849509 Msa0155480:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG + chr1_4:20849507-20849526 None:intergenic 70.0%
AGTCTCCGATGCGGCGGCGG+TGG - chr1_4:20849371-20849390 Msa0155480:CDS 75.0%
AGTCTCCGATGCGGCGGCGG+TGG - chr1_4:20849371-20849390 Msa0155480:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 20847949 20850028 20847949 ID=Msa0155480;Name=Msa0155480
chr1_4 mRNA 20847949 20850028 20847949 ID=Msa0155480-mRNA-1;Parent=Msa0155480;Name=Msa0155480-mRNA-1;_AED=0.03;_eAED=0.03;_QI=401|1|1|1|1|1|3|432|354
chr1_4 exon 20847949 20848895 20847949 ID=Msa0155480-mRNA-1:exon:7553;Parent=Msa0155480-mRNA-1
chr1_4 exon 20848979 20849171 20848979 ID=Msa0155480-mRNA-1:exon:7552;Parent=Msa0155480-mRNA-1
chr1_4 exon 20849271 20850028 20849271 ID=Msa0155480-mRNA-1:exon:7551;Parent=Msa0155480-mRNA-1
chr1_4 five_prime_UTR 20849628 20850028 20849628 ID=Msa0155480-mRNA-1:five_prime_utr;Parent=Msa0155480-mRNA-1
chr1_4 CDS 20849271 20849627 20849271 ID=Msa0155480-mRNA-1:cds;Parent=Msa0155480-mRNA-1
chr1_4 CDS 20848979 20849171 20848979 ID=Msa0155480-mRNA-1:cds;Parent=Msa0155480-mRNA-1
chr1_4 CDS 20848381 20848895 20848381 ID=Msa0155480-mRNA-1:cds;Parent=Msa0155480-mRNA-1
chr1_4 three_prime_UTR 20847949 20848380 20847949 ID=Msa0155480-mRNA-1:three_prime_utr;Parent=Msa0155480-mRNA-1
Gene Sequence

>Msa0155480

ATGGCTCCGTTGAAGATCCAACCAATTGACATAGATTCAGAGAAAGCCACTACGGAACTGGTTCGAAATGAACCAGTTTCGAAGTGGAGGTTGAAGAGGTTTTTCGCTTTCGAGAAACCTTTTCCAAAGAACAATACCACTAAAGATGGTGGTGGTGGAGTTGCTGAGTTGGAACCAAGCTCTGTTTGCTTGGCGAAAATGGTTCAGAGTTTCATGGAAGAACAACCGCAACCGCAACTTCAACCACCGTCTCGTAACCGCTGCAACTGTTTCAACGCTAACAGCTCCGACGAAGATGATTTCGATTTCAACGGCTATACGCATGAATCAGCCACCGATTCAACTGACTCACTCAAGAGTTTGATTCCTTGTGTAAGTGTTGAAGAACGGAATTTACTAGCAGATGCAACGAAAATTGTTGAGAAGAATAGCAAAATTTACAAAAGGAAAGAAGATTTGATTAAGATCGTTGCGGAAAAGCTTCAATCTCTCGGTTACGATTCATCCATTTGCAAATCAAAATGGGAGAAAACAAATTCTTGTCCTGCTGGTGATTATCAATTCATTGATGCGATTGTGGAAGGTGAAACGTTGATTATTGATATCGATTTTCGATCGGAGTTTGAAATCGCGAGATCTACAAGTCAGTATAAGACGATTCTTCAATCGCTTCCGTATATTTTCGTCGGCAAAAGGGAACGGTTGAAGCAGATCGTCACCGTCGTGTCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCATGTTCCGCCGTGGAGGAAGCGCGATTACATGTTAGCGAAGTGGATCTCTCCGTCGGCAGCTAGGCCAAAGCAAGTCTCCGATGCGGCGGCGGTGGAAACAGTTTCATCGGAGGTGGATAGTGATTCTGGTGAATTGGAGCTGATTTTTGGTGAGGAGAAAGCTTCACCGGAGGAGGTAGTTACGGCGGCGACAGCGACGGTGAGTCCAGCGTGGCAGTTACCGGCGGTGAAACCGAAGAGTGGTGAAAGAGGAATGAAGGTGACTGGATTAGCTTCTTTGCTGAAGGAGAAACCATAG
Protein sequence

>Msa0155480

MAPLKIQPIDIDSEKATTELVRNEPVSKWRLKRFFAFEKPFPKNNTTKDGGGGVAELEPSSVCLAKMVQSFMEEQPQPQLQPPSRNRCNCFNANSSDEDDFDFNGYTHESATDSTDSLKSLIPCVSVEERNLLADATKIVEKNSKIYKRKEDLIKIVAEKLQSLGYDSSICKSKWEKTNSCPAGDYQFIDAIVEGETLIIDIDFRSEFEIARSTSQYKTILQSLPYIFVGKRERLKQIVTVVSEAAKQSLKKKGMHVPPWRKRDYMLAKWISPSAARPKQVSDAAAVETVSSEVDSDSGELELIFGEEKASPEEVVTAATATVSPAWQLPAVKPKSGERGMKVTGLASLLKEKP*