AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0109050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109050 MtrunA17_Chr1g0166241 94.429 359 15 3 1 356 1 357 0.0 664
Msa0109050 MtrunA17_Chr1g0188091 56.658 383 130 12 1 349 1 381 1.91e-130 378
Msa0109050 MtrunA17_Chr7g0260551 44.444 369 172 11 4 356 5 356 1.25e-91 278
Msa0109050 MtrunA17_Chr1g0184881 45.799 369 157 11 4 354 5 348 2.08e-87 267
Msa0109050 MtrunA17_Chr4g0075591 34.742 213 123 2 60 272 41 237 8.57e-37 134
Msa0109050 MtrunA17_Chr8g0384101 40.845 142 77 1 153 287 82 223 2.09e-36 132
Msa0109050 MtrunA17_Chr7g0251511 37.778 225 107 9 64 273 50 256 5.24e-36 133
Msa0109050 MtrunA17_Chr4g0075611 39.850 133 80 0 155 287 138 270 1.95e-34 128
Msa0109050 MtrunA17_Chr2g0289701 43.478 138 74 1 161 298 142 275 6.96e-34 127
Msa0109050 MtrunA17_Chr2g0282301 40.625 128 70 2 153 274 143 270 1.78e-32 123
Msa0109050 MtrunA17_Chr4g0040171 39.683 126 67 2 153 270 119 243 2.25e-30 117
Msa0109050 MtrunA17_Chr4g0047231 37.795 127 73 2 153 273 149 275 3.98e-30 117
Msa0109050 MtrunA17_Chr8g0339051 31.250 240 126 8 51 273 41 258 1.11e-29 115
Msa0109050 MtrunA17_Chr4g0047221 37.795 127 73 2 153 273 202 328 1.23e-29 117
Msa0109050 MtrunA17_Chr2g0282311 29.560 159 106 2 126 278 116 274 5.82e-27 108
Msa0109050 MtrunA17_Chr7g0234691 29.515 227 128 8 61 274 91 298 8.06e-26 105
Msa0109050 MtrunA17_Chr5g0396281 34.677 124 75 1 153 270 97 220 9.46e-24 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109050 AT3G22970.1 48.564 383 150 10 4 356 5 370 4.67e-105 313
Msa0109050 AT4G14620.1 49.451 364 145 14 4 354 2 339 1.20e-94 286
Msa0109050 AT2G38820.2 43.125 320 150 8 4 306 5 309 3.80e-83 255
Msa0109050 AT3G22970.2 50.794 252 96 5 118 356 23 259 7.93e-74 229
Msa0109050 AT3G54550.1 41.155 277 139 8 5 272 6 267 4.75e-61 197
Msa0109050 AT3G07350.1 31.621 253 152 6 51 290 34 278 3.47e-34 128
Msa0109050 AT2G38820.1 39.175 194 97 5 4 184 5 190 7.72e-34 124
Msa0109050 AT2G39650.2 43.902 123 63 1 157 273 52 174 3.07e-32 121
Msa0109050 AT3G25240.1 33.778 225 129 5 57 273 30 242 7.91e-32 121
Msa0109050 AT2G39650.1 43.902 123 63 1 157 273 114 236 8.17e-32 121
Msa0109050 AT4G32480.1 40.164 122 67 2 157 272 120 241 4.32e-28 111
Msa0109050 AT1G62420.1 30.698 215 121 6 64 272 38 230 5.87e-28 110
Msa0109050 AT2G20670.1 39.474 114 63 1 165 272 130 243 1.11e-26 107
Msa0109050 AT1G77145.1 35.000 140 73 2 150 271 72 211 2.39e-25 103
Msa0109050 AT1G12030.1 38.938 113 68 1 161 272 118 230 3.64e-25 103
Msa0109050 AT1G77160.2 34.247 146 78 2 150 277 22 167 4.74e-25 101
Msa0109050 AT1G77160.1 29.834 181 106 3 118 277 42 222 1.00e-24 101
Msa0109050 AT1G77145.2 39.583 96 48 1 186 271 59 154 5.31e-20 87.4

Find 105 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTTTGCTTGGCGAAAA+TGG 0.121680 1_3:+20952838 Msa0109050:CDS
GTCAACAATGATCTGATTTC+TGG 0.126621 1_3:+20954275 Msa0109050:three_prime_UTR
CATCCATTTGCAGATCAAAA+TGG 0.248714 1_3:+20953253 Msa0109050:CDS
AATATTGAGAAGAAGATTAA+TGG 0.269219 1_3:+20952640 Msa0109050:exon
AGACGAGCATTGTTAATTTC+CGG 0.316405 1_3:-20952378 None:intergenic
TTCAACCTCCACTTCGAAAC+TGG 0.330861 1_3:-20952731 None:intergenic
TAAAGAGAAAATTTCGGATA+AGG 0.343195 1_3:+20953977 Msa0109050:three_prime_UTR
AAAGTTATGGTTAGAAGAAA+AGG 0.343989 1_3:-20952435 None:intergenic
GCCGCATCGGAGACTTGCTT+TGG 0.348894 1_3:-20953665 None:intergenic
CTTCTAGGCTAAGAAAGTTA+TGG 0.360468 1_3:-20952448 None:intergenic
AAGAAAAGAAGATTTGATTA+AGG 0.362890 1_3:+20953194 Msa0109050:CDS
TCGGAGGTGGATAGTGATTC+TGG 0.369464 1_3:+20953707 Msa0109050:CDS
TCCGGTGAAGTAAATATTGC+CGG 0.371366 1_3:-20952360 None:intergenic
TTCAAATTCAAATTAAACTT+TGG 0.377537 1_3:-20954209 None:intergenic
GAGTCCAGCGTGGCAGTTAC+CGG 0.378357 1_3:+20953808 Msa0109050:CDS
GATTGGATTCCTTAAGGATA+TGG 0.397537 1_3:+20954253 Msa0109050:three_prime_UTR
TCACACATATCACACTAGTT+TGG 0.409243 1_3:-20954232 None:intergenic
GCTGAAAAGCTTCAATCTCT+TGG 0.409442 1_3:+20953222 Msa0109050:CDS
TCAACAATGATCTGATTTCT+GGG 0.414981 1_3:+20954276 Msa0109050:three_prime_UTR
TTCTCTGAATCTATGTCAAT+CGG 0.419113 1_3:-20952680 None:intergenic
TCTTTAGTGGTATTGTTCTT+CGG 0.421271 1_3:-20952782 None:intergenic
CATTGTTGACCATATCCTTA+AGG 0.422111 1_3:-20954262 None:intergenic
ATTCCTCTTTCACCACTCTT+CGG 0.422133 1_3:-20953839 None:intergenic
GTGGTATTGTTCTTCGGAAA+AGG 0.429831 1_3:-20952776 None:intergenic
TGCTTTGGCCTAGCTGCCGC+CGG 0.433998 1_3:-20953650 None:intergenic
TCCACCACCACCATCTTTAG+TGG 0.439948 1_3:-20952795 None:intergenic
AGTCTCCGATGCGGCGGCGG+TGG 0.440423 1_3:+20953673 Msa0109050:CDS
ATCCATTTGCAGATCAAAAT+GGG 0.441823 1_3:+20953254 Msa0109050:CDS
GGATAGTGATTCTGGTGAAT+TGG 0.451879 1_3:+20953715 Msa0109050:CDS
TCCGGCAATATTTACTTCAC+CGG 0.453387 1_3:+20952359 Msa0109050:five_prime_UTR
CTTAACTGAGTCAGTTGAAT+CGG 0.458623 1_3:-20952993 None:intergenic
CGATTCAACTGACTCAGTTA+AGG 0.466446 1_3:+20952994 Msa0109050:CDS
TTCGCCAAGCAAACAGAGCT+TGG 0.466708 1_3:-20952833 None:intergenic
AAAACAAATTCTTGTCCTGC+TGG 0.468712 1_3:+20953279 Msa0109050:CDS
AATTCAAATTAAACTTTGGA+TGG 0.470357 1_3:-20954205 None:intergenic
GGAACCAAGCTCTGTTTGCT+TGG 0.476354 1_3:+20952829 Msa0109050:CDS
AGAGAAAGCCACTACGGAAC+TGG 0.478102 1_3:+20952697 Msa0109050:CDS
ATGTGTGATTGGATTCCTTA+AGG 0.481577 1_3:+20954247 Msa0109050:three_prime_UTR
CCACTCTTCGGTTTCACCGC+CGG 0.488504 1_3:-20953827 None:intergenic
TTAGAAGAAAAGGAGTTTCG+TGG 0.491815 1_3:-20952425 None:intergenic
GCAAGTCTCCGATGCGGCGG+CGG 0.496129 1_3:+20953670 Msa0109050:CDS
CGAGACGGTGGTTGAAGTTG+CGG 0.502860 1_3:-20952890 None:intergenic
AAGAACAATACCACTAAAGA+TGG 0.505083 1_3:+20952785 Msa0109050:CDS
GAGTGGTGAAAGAGGAATGA+AGG 0.505285 1_3:+20953844 Msa0109050:CDS
TGCCGGAAAATTCATATCTC+CGG 0.507661 1_3:-20952343 None:intergenic
TGGATTAGCTTCTTTGCTGA+AGG 0.511501 1_3:+20953871 Msa0109050:CDS
GGAGAAAGCTTCGCCGGAGG+AGG 0.512134 1_3:+20953754 Msa0109050:CDS
TGGTGGTGGAGTTGCTGAGT+TGG 0.512259 1_3:+20952808 Msa0109050:CDS
TTCGCCGGAGGAGGTAGTTA+CGG 0.512281 1_3:+20953763 Msa0109050:CDS
ACCACTAAAGATGGTGGTGG+TGG 0.516726 1_3:+20952794 Msa0109050:CDS
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_3:+20953572 Msa0109050:CDS
ACCGCCGGTAACTGCCACGC+TGG 0.521213 1_3:-20953812 None:intergenic
GAAGACATGACGACGGTGAT+CGG 0.524244 1_3:-20952403 None:intergenic
GAAAATGGTTCAGAGTTTCA+TGG 0.527012 1_3:+20952853 Msa0109050:CDS
ACTAGTGTGATATGTGTGAT+TGG 0.527155 1_3:+20954236 Msa0109050:three_prime_UTR
GGATCTCTCCGGCGGCAGCT+AGG 0.528128 1_3:+20953642 Msa0109050:CDS
TGTTTCCACCGCCGCCGCAT+CGG 0.530760 1_3:-20953678 None:intergenic
GGAAACAGTTTCATCGGAGG+TGG 0.532775 1_3:+20953694 Msa0109050:CDS
GGTGGTTGAAGTTGCGGTTG+CGG 0.536574 1_3:-20952884 None:intergenic
CGTCACCGTCATGTCGGAGG+CGG 0.549114 1_3:+20953547 Msa0109050:CDS
CTGAATCTATGTCAATCGGT+TGG 0.551079 1_3:-20952676 None:intergenic
TCAATTCATTGATGCGATTG+TGG 0.553988 1_3:+20953391 Msa0109050:CDS
TGGTGAGGAGAAAGCTTCGC+CGG 0.554242 1_3:+20953748 Msa0109050:CDS
AAACCGAAGAGTGGTGAAAG+AGG 0.554832 1_3:+20953836 Msa0109050:CDS
GAAAGAGGAATGAAGGTGAC+TGG 0.556629 1_3:+20953851 Msa0109050:CDS
TTTCGAAGTGGAGGTTGAAG+AGG 0.556890 1_3:+20952735 Msa0109050:CDS
GGCGGTGGAAACAGTTTCAT+CGG 0.562645 1_3:+20953688 Msa0109050:CDS
CGTTCTTCAACACTTACACA+AGG 0.565445 1_3:-20953117 None:intergenic
GAAGATGATTTCGATTTCAA+CGG 0.567151 1_3:+20952950 Msa0109050:CDS
CTTGTGTAAGTGTTGAAGAA+CGG 0.570166 1_3:+20953118 Msa0109050:CDS
ATGTAATCGCGCTTCCTCCA+CGG 0.582747 1_3:-20953608 None:intergenic
CTTCGCCGCCTCCGACATGA+CGG 0.584516 1_3:-20953552 None:intergenic
TTCATTGATGCGATTGTGGA+AGG 0.586622 1_3:+20953395 Msa0109050:CDS
GCCGCCGTAACTACCTCCTC+CGG 0.598847 1_3:-20953767 None:intergenic
ATGAACCAGTTTCGAAGTGG+AGG 0.599985 1_3:+20952726 Msa0109050:CDS
ATTGCGAACCAGTTCCGTAG+TGG 0.610392 1_3:-20952705 None:intergenic
GTTAGCGAAGTGGATCTCTC+CGG 0.616423 1_3:+20953631 Msa0109050:CDS
AGATTCAGAGAAAGCCACTA+CGG 0.617727 1_3:+20952691 Msa0109050:CDS
AAAGCAAGTCTCCGATGCGG+CGG 0.623703 1_3:+20953667 Msa0109050:CDS
GAATGCATGTTCCGCCGTGG+AGG 0.625206 1_3:+20953594 Msa0109050:CDS
GCAGATCGTCACCGTCATGT+CGG 0.626575 1_3:+20953541 Msa0109050:CDS
GAAATCGAAATCATCTTCGT+CGG 0.627970 1_3:-20952945 None:intergenic
GCAATGAACCAGTTTCGAAG+TGG 0.634899 1_3:+20952723 Msa0109050:CDS
AACAATACCACTAAAGATGG+TGG 0.638792 1_3:+20952788 Msa0109050:CDS
TCAATCGGTTGGATCTTCAA+CGG 0.649259 1_3:-20952665 None:intergenic
GCGATTACATGTTAGCGAAG+TGG 0.650775 1_3:+20953621 Msa0109050:CDS
CAGTTACAGCGGTTACGAGA+CGG 0.650994 1_3:-20952905 None:intergenic
GATCGTCACCGTCATGTCGG+AGG 0.651203 1_3:+20953544 Msa0109050:CDS
AAGAAAACAGAAAACCTCGC+CGG 0.655169 1_3:+20952324 Msa0109050:five_prime_UTR
TCCAGCGTGGCAGTTACCGG+CGG 0.657779 1_3:+20953811 Msa0109050:CDS
AGCGAAGTGGATCTCTCCGG+CGG 0.660131 1_3:+20953634 Msa0109050:CDS
CCGGCGGTGAAACCGAAGAG+TGG 0.661349 1_3:+20953827 Msa0109050:CDS
AATACCACTAAAGATGGTGG+TGG 0.666485 1_3:+20952791 Msa0109050:CDS
AAGGAATGCATGTTCCGCCG+TGG 0.669326 1_3:+20953591 Msa0109050:CDS
GGCGGCGACAGCGACAGCGA+CGG 0.672784 1_3:+20953784 Msa0109050:CDS
GAAAATTCATATCTCCGGCG+AGG 0.678693 1_3:-20952338 None:intergenic
GCCGGAGGAGGTAGTTACGG+CGG 0.688861 1_3:+20953766 Msa0109050:CDS
GGTGGAAACAGTTTCATCGG+AGG 0.697111 1_3:+20953691 Msa0109050:CDS
TAGCGTTGAAGCAGTTACAG+CGG 0.707056 1_3:-20952916 None:intergenic
TGAGGAGAAAGCTTCGCCGG+AGG 0.709522 1_3:+20953751 Msa0109050:CDS
GCCAAAGCAAGTCTCCGATG+CGG 0.718766 1_3:+20953664 Msa0109050:CDS
TTACAGCGGTTACGAGACGG+TGG 0.731805 1_3:-20952902 None:intergenic
CAGCGACGGTGAGTCCAGCG+TGG 0.734694 1_3:+20953798 Msa0109050:CDS
TTTCGTGGAAGACATGACGA+CGG 0.761807 1_3:-20952410 None:intergenic
TAATCGCGCTTCCTCCACGG+CGG 0.770748 1_3:-20953605 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTTTTTTATTTTGATTT+TGG + chr1_3:20953069-20953088 Msa0109050:intron 10.0%
!! AAAAATTAAAGAGAAAATTT+CGG + chr1_3:20953971-20953990 Msa0109050:three_prime_UTR 10.0%
!!! ATAGTTTTTTATTTTGATTT+TGG + chr1_3:20953069-20953088 Msa0109050:intron 10.0%
!! AAAAATTAAAGAGAAAATTT+CGG + chr1_3:20953971-20953990 Msa0109050:three_prime_UTR 10.0%
!!! TAATTTTTTTTTTCTCTTCT+AGG - chr1_3:20952466-20952485 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG - chr1_3:20953902-20953921 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG - chr1_3:20954212-20954231 None:intergenic 15.0%
!!! TAATTTTTTTTTTCTCTTCT+AGG - chr1_3:20952466-20952485 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG - chr1_3:20953902-20953921 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG - chr1_3:20954212-20954231 None:intergenic 15.0%
!!! AGGTTTTTTTTTTTATGTGT+TGG - chr1_3:20952294-20952313 None:intergenic 20.0%
!!! CTGTTTTCTTACAAAAAAAA+AGG - chr1_3:20952314-20952333 None:intergenic 20.0%
!! AATATTGAGAAGAAGATTAA+TGG + chr1_3:20952640-20952659 Msa0109050:exon 20.0%
!! AAGAAAAGAAGATTTGATTA+AGG + chr1_3:20953194-20953213 Msa0109050:CDS 20.0%
!!! ATCGTTTTTTGTTTTGTTTT+AGG + chr1_3:20953362-20953381 Msa0109050:intron 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG + chr1_3:20954094-20954113 Msa0109050:three_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG - chr1_3:20954208-20954227 None:intergenic 20.0%
!!! AGGTTTTTTTTTTTATGTGT+TGG - chr1_3:20952294-20952313 None:intergenic 20.0%
!!! CTGTTTTCTTACAAAAAAAA+AGG - chr1_3:20952314-20952333 None:intergenic 20.0%
!! AATATTGAGAAGAAGATTAA+TGG + chr1_3:20952640-20952659 Msa0109050:exon 20.0%
!! AAGAAAAGAAGATTTGATTA+AGG + chr1_3:20953194-20953213 Msa0109050:CDS 20.0%
!!! ATCGTTTTTTGTTTTGTTTT+AGG + chr1_3:20953362-20953381 Msa0109050:intron 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG + chr1_3:20954094-20954113 Msa0109050:three_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG - chr1_3:20954208-20954227 None:intergenic 20.0%
! AAAGTTATGGTTAGAAGAAA+AGG - chr1_3:20952438-20952457 None:intergenic 25.0%
!!! TATTGATATCGATTTTCGAT+CGG + chr1_3:20953430-20953449 Msa0109050:CDS 25.0%
!!! CTTTTTTCTTTTTTTGATCG+TGG + chr1_3:20953934-20953953 Msa0109050:three_prime_UTR 25.0%
! TAAAGAGAAAATTTCGGATA+AGG + chr1_3:20953977-20953996 Msa0109050:three_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTTACA+AGG + chr1_3:20954041-20954060 Msa0109050:three_prime_UTR 25.0%
! TCCTTGTAAACAAAAAAACA+AGG - chr1_3:20954045-20954064 None:intergenic 25.0%
! AAAGTTATGGTTAGAAGAAA+AGG - chr1_3:20952438-20952457 None:intergenic 25.0%
!!! TATTGATATCGATTTTCGAT+CGG + chr1_3:20953430-20953449 Msa0109050:CDS 25.0%
!!! CTTTTTTCTTTTTTTGATCG+TGG + chr1_3:20953934-20953953 Msa0109050:three_prime_UTR 25.0%
! TAAAGAGAAAATTTCGGATA+AGG + chr1_3:20953977-20953996 Msa0109050:three_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTTACA+AGG + chr1_3:20954041-20954060 Msa0109050:three_prime_UTR 25.0%
! TCCTTGTAAACAAAAAAACA+AGG - chr1_3:20954045-20954064 None:intergenic 25.0%
TTCTCTGAATCTATGTCAAT+CGG - chr1_3:20952683-20952702 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+CGG - chr1_3:20952785-20952804 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG + chr1_3:20952785-20952804 Msa0109050:CDS 30.0%
GAAGATGATTTCGATTTCAA+CGG + chr1_3:20952950-20952969 Msa0109050:CDS 30.0%
ATCCATTTGCAGATCAAAAT+GGG + chr1_3:20953254-20953273 Msa0109050:CDS 30.0%
TTAGAGAATTAATTACCAGC+AGG - chr1_3:20953297-20953316 None:intergenic 30.0%
! TTTTTCCCGACGAAAATATA+CGG - chr1_3:20953509-20953528 None:intergenic 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG + chr1_3:20954102-20954121 Msa0109050:three_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG + chr1_3:20954276-20954295 Msa0109050:three_prime_UTR 30.0%
TTCTCTGAATCTATGTCAAT+CGG - chr1_3:20952683-20952702 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+CGG - chr1_3:20952785-20952804 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG + chr1_3:20952785-20952804 Msa0109050:CDS 30.0%
GAAGATGATTTCGATTTCAA+CGG + chr1_3:20952950-20952969 Msa0109050:CDS 30.0%
ATCCATTTGCAGATCAAAAT+GGG + chr1_3:20953254-20953273 Msa0109050:CDS 30.0%
TTAGAGAATTAATTACCAGC+AGG - chr1_3:20953297-20953316 None:intergenic 30.0%
! TTTTTCCCGACGAAAATATA+CGG - chr1_3:20953509-20953528 None:intergenic 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG + chr1_3:20954102-20954121 Msa0109050:three_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG + chr1_3:20954276-20954295 Msa0109050:three_prime_UTR 30.0%
! AGACGAGCATTGTTAATTTC+CGG - chr1_3:20952381-20952400 None:intergenic 35.0%
TTAGAAGAAAAGGAGTTTCG+TGG - chr1_3:20952428-20952447 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG - chr1_3:20952451-20952470 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG + chr1_3:20952788-20952807 Msa0109050:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG + chr1_3:20952853-20952872 Msa0109050:CDS 35.0%
GAAATCGAAATCATCTTCGT+CGG - chr1_3:20952948-20952967 None:intergenic 35.0%
CTTAACTGAGTCAGTTGAAT+CGG - chr1_3:20952996-20953015 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG + chr1_3:20953118-20953137 Msa0109050:CDS 35.0%
CATCCATTTGCAGATCAAAA+TGG + chr1_3:20953253-20953272 Msa0109050:CDS 35.0%
AAAACAAATTCTTGTCCTGC+TGG + chr1_3:20953279-20953298 Msa0109050:CDS 35.0%
TCAATTCATTGATGCGATTG+TGG + chr1_3:20953391-20953410 Msa0109050:CDS 35.0%
! GTATATTTTCGTCGGGAAAA+AGG + chr1_3:20953508-20953527 Msa0109050:CDS 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG + chr1_3:20953572-20953591 Msa0109050:CDS 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG - chr1_3:20954107-20954126 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG + chr1_3:20954117-20954136 Msa0109050:three_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG - chr1_3:20954235-20954254 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG + chr1_3:20954236-20954255 Msa0109050:three_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG + chr1_3:20954247-20954266 Msa0109050:three_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG + chr1_3:20954253-20954272 Msa0109050:three_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG - chr1_3:20954265-20954284 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG + chr1_3:20954275-20954294 Msa0109050:three_prime_UTR 35.0%
! AGACGAGCATTGTTAATTTC+CGG - chr1_3:20952381-20952400 None:intergenic 35.0%
TTAGAAGAAAAGGAGTTTCG+TGG - chr1_3:20952428-20952447 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG - chr1_3:20952451-20952470 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG + chr1_3:20952788-20952807 Msa0109050:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG + chr1_3:20952853-20952872 Msa0109050:CDS 35.0%
GAAATCGAAATCATCTTCGT+CGG - chr1_3:20952948-20952967 None:intergenic 35.0%
CTTAACTGAGTCAGTTGAAT+CGG - chr1_3:20952996-20953015 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG + chr1_3:20953118-20953137 Msa0109050:CDS 35.0%
CATCCATTTGCAGATCAAAA+TGG + chr1_3:20953253-20953272 Msa0109050:CDS 35.0%
AAAACAAATTCTTGTCCTGC+TGG + chr1_3:20953279-20953298 Msa0109050:CDS 35.0%
TCAATTCATTGATGCGATTG+TGG + chr1_3:20953391-20953410 Msa0109050:CDS 35.0%
! GTATATTTTCGTCGGGAAAA+AGG + chr1_3:20953508-20953527 Msa0109050:CDS 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG + chr1_3:20953572-20953591 Msa0109050:CDS 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG - chr1_3:20954107-20954126 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG + chr1_3:20954117-20954136 Msa0109050:three_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG - chr1_3:20954235-20954254 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG + chr1_3:20954236-20954255 Msa0109050:three_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG + chr1_3:20954247-20954266 Msa0109050:three_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG + chr1_3:20954253-20954272 Msa0109050:three_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG - chr1_3:20954265-20954284 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG + chr1_3:20954275-20954294 Msa0109050:three_prime_UTR 35.0%
AAGAAAACAGAAAACCTCGC+CGG + chr1_3:20952324-20952343 Msa0109050:five_prime_UTR 40.0%
TGCCGGAAAATTCATATCTC+CGG - chr1_3:20952346-20952365 None:intergenic 40.0%
TCCGGCAATATTTACTTCAC+CGG + chr1_3:20952359-20952378 Msa0109050:five_prime_UTR 40.0%
TCCGGTGAAGTAAATATTGC+CGG - chr1_3:20952363-20952382 None:intergenic 40.0%
TCAATCGGTTGGATCTTCAA+CGG - chr1_3:20952668-20952687 None:intergenic 40.0%
CTGAATCTATGTCAATCGGT+TGG - chr1_3:20952679-20952698 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG + chr1_3:20952691-20952710 Msa0109050:CDS 40.0%
GTGGTATTGTTCTTCGGAAA+AGG - chr1_3:20952779-20952798 None:intergenic 40.0%
! AATACCACTAAAGATGGTGG+TGG + chr1_3:20952791-20952810 Msa0109050:CDS 40.0%
! CGATTCAACTGACTCAGTTA+AGG + chr1_3:20952994-20953013 Msa0109050:CDS 40.0%
CGTTCTTCAACACTTACACA+AGG - chr1_3:20953120-20953139 None:intergenic 40.0%
GCTGAAAAGCTTCAATCTCT+TGG + chr1_3:20953222-20953241 Msa0109050:CDS 40.0%
!! CTCCCATTTTGATCTGCAAA+TGG - chr1_3:20953259-20953278 None:intergenic 40.0%
TTCATTGATGCGATTGTGGA+AGG + chr1_3:20953395-20953414 Msa0109050:CDS 40.0%
! TCGCTTCCGTATATTTTCGT+CGG + chr1_3:20953500-20953519 Msa0109050:CDS 40.0%
GGATAGTGATTCTGGTGAAT+TGG + chr1_3:20953715-20953734 Msa0109050:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG + chr1_3:20953728-20953747 Msa0109050:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG + chr1_3:20953733-20953752 Msa0109050:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG - chr1_3:20953842-20953861 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG + chr1_3:20953871-20953890 Msa0109050:CDS 40.0%
AAGAAAACAGAAAACCTCGC+CGG + chr1_3:20952324-20952343 Msa0109050:five_prime_UTR 40.0%
TGCCGGAAAATTCATATCTC+CGG - chr1_3:20952346-20952365 None:intergenic 40.0%
TCCGGCAATATTTACTTCAC+CGG + chr1_3:20952359-20952378 Msa0109050:five_prime_UTR 40.0%
TCCGGTGAAGTAAATATTGC+CGG - chr1_3:20952363-20952382 None:intergenic 40.0%
TCAATCGGTTGGATCTTCAA+CGG - chr1_3:20952668-20952687 None:intergenic 40.0%
CTGAATCTATGTCAATCGGT+TGG - chr1_3:20952679-20952698 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG + chr1_3:20952691-20952710 Msa0109050:CDS 40.0%
GTGGTATTGTTCTTCGGAAA+AGG - chr1_3:20952779-20952798 None:intergenic 40.0%
! AATACCACTAAAGATGGTGG+TGG + chr1_3:20952791-20952810 Msa0109050:CDS 40.0%
! CGATTCAACTGACTCAGTTA+AGG + chr1_3:20952994-20953013 Msa0109050:CDS 40.0%
CGTTCTTCAACACTTACACA+AGG - chr1_3:20953120-20953139 None:intergenic 40.0%
GCTGAAAAGCTTCAATCTCT+TGG + chr1_3:20953222-20953241 Msa0109050:CDS 40.0%
!! CTCCCATTTTGATCTGCAAA+TGG - chr1_3:20953259-20953278 None:intergenic 40.0%
TTCATTGATGCGATTGTGGA+AGG + chr1_3:20953395-20953414 Msa0109050:CDS 40.0%
! TCGCTTCCGTATATTTTCGT+CGG + chr1_3:20953500-20953519 Msa0109050:CDS 40.0%
GGATAGTGATTCTGGTGAAT+TGG + chr1_3:20953715-20953734 Msa0109050:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG + chr1_3:20953728-20953747 Msa0109050:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG + chr1_3:20953733-20953752 Msa0109050:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG - chr1_3:20953842-20953861 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG + chr1_3:20953871-20953890 Msa0109050:CDS 40.0%
GAAAATTCATATCTCCGGCG+AGG - chr1_3:20952341-20952360 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG + chr1_3:20952341-20952360 Msa0109050:five_prime_UTR 45.0%
TTTCGTGGAAGACATGACGA+CGG - chr1_3:20952413-20952432 None:intergenic 45.0%
GCAATGAACCAGTTTCGAAG+TGG + chr1_3:20952723-20952742 Msa0109050:CDS 45.0%
ATGAACCAGTTTCGAAGTGG+AGG + chr1_3:20952726-20952745 Msa0109050:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG - chr1_3:20952734-20952753 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG + chr1_3:20952735-20952754 Msa0109050:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG + chr1_3:20952838-20952857 Msa0109050:CDS 45.0%
! TAGCGTTGAAGCAGTTACAG+CGG - chr1_3:20952919-20952938 None:intergenic 45.0%
! CGCTTCCGTATATTTTCGTC+GGG + chr1_3:20953501-20953520 Msa0109050:CDS 45.0%
! TTTTCGTCGGGAAAAAGGAG+CGG + chr1_3:20953513-20953532 Msa0109050:CDS 45.0%
GCGATTACATGTTAGCGAAG+TGG + chr1_3:20953621-20953640 Msa0109050:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG + chr1_3:20953836-20953855 Msa0109050:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG + chr1_3:20953844-20953863 Msa0109050:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG + chr1_3:20953851-20953870 Msa0109050:CDS 45.0%
GAAAATTCATATCTCCGGCG+AGG - chr1_3:20952341-20952360 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG + chr1_3:20952341-20952360 Msa0109050:five_prime_UTR 45.0%
TTTCGTGGAAGACATGACGA+CGG - chr1_3:20952413-20952432 None:intergenic 45.0%
GCAATGAACCAGTTTCGAAG+TGG + chr1_3:20952723-20952742 Msa0109050:CDS 45.0%
ATGAACCAGTTTCGAAGTGG+AGG + chr1_3:20952726-20952745 Msa0109050:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG - chr1_3:20952734-20952753 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG + chr1_3:20952735-20952754 Msa0109050:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG + chr1_3:20952838-20952857 Msa0109050:CDS 45.0%
! TAGCGTTGAAGCAGTTACAG+CGG - chr1_3:20952919-20952938 None:intergenic 45.0%
! CGCTTCCGTATATTTTCGTC+GGG + chr1_3:20953501-20953520 Msa0109050:CDS 45.0%
! TTTTCGTCGGGAAAAAGGAG+CGG + chr1_3:20953513-20953532 Msa0109050:CDS 45.0%
GCGATTACATGTTAGCGAAG+TGG + chr1_3:20953621-20953640 Msa0109050:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG + chr1_3:20953836-20953855 Msa0109050:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG + chr1_3:20953844-20953863 Msa0109050:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG + chr1_3:20953851-20953870 Msa0109050:CDS 45.0%
!!! TTTTATTTTTGAAATATTTT+TGG + chr1_3:20954010-20954029 Msa0109050:three_prime_UTR 5.0%
!!! TTTTATTTTTGAAATATTTT+TGG + chr1_3:20954010-20954029 Msa0109050:three_prime_UTR 5.0%
GAAGACATGACGACGGTGAT+CGG - chr1_3:20952406-20952425 None:intergenic 50.0%
AGAGAAAGCCACTACGGAAC+TGG + chr1_3:20952697-20952716 Msa0109050:CDS 50.0%
ATTGCGAACCAGTTCCGTAG+TGG - chr1_3:20952708-20952727 None:intergenic 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG + chr1_3:20952794-20952813 Msa0109050:CDS 50.0%
TCCACCACCACCATCTTTAG+TGG - chr1_3:20952798-20952817 None:intergenic 50.0%
GGAACCAAGCTCTGTTTGCT+TGG + chr1_3:20952829-20952848 Msa0109050:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG - chr1_3:20952836-20952855 None:intergenic 50.0%
CAGTTACAGCGGTTACGAGA+CGG - chr1_3:20952908-20952927 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG - chr1_3:20953611-20953630 None:intergenic 50.0%
GTTAGCGAAGTGGATCTCTC+CGG + chr1_3:20953631-20953650 Msa0109050:CDS 50.0%
GGCGGTGGAAACAGTTTCAT+CGG + chr1_3:20953688-20953707 Msa0109050:CDS 50.0%
GGTGGAAACAGTTTCATCGG+AGG + chr1_3:20953691-20953710 Msa0109050:CDS 50.0%
GGAAACAGTTTCATCGGAGG+TGG + chr1_3:20953694-20953713 Msa0109050:CDS 50.0%
TCGGAGGTGGATAGTGATTC+TGG + chr1_3:20953707-20953726 Msa0109050:CDS 50.0%
GAAGACATGACGACGGTGAT+CGG - chr1_3:20952406-20952425 None:intergenic 50.0%
AGAGAAAGCCACTACGGAAC+TGG + chr1_3:20952697-20952716 Msa0109050:CDS 50.0%
ATTGCGAACCAGTTCCGTAG+TGG - chr1_3:20952708-20952727 None:intergenic 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG + chr1_3:20952794-20952813 Msa0109050:CDS 50.0%
TCCACCACCACCATCTTTAG+TGG - chr1_3:20952798-20952817 None:intergenic 50.0%
GGAACCAAGCTCTGTTTGCT+TGG + chr1_3:20952829-20952848 Msa0109050:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG - chr1_3:20952836-20952855 None:intergenic 50.0%
CAGTTACAGCGGTTACGAGA+CGG - chr1_3:20952908-20952927 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG - chr1_3:20953611-20953630 None:intergenic 50.0%
GTTAGCGAAGTGGATCTCTC+CGG + chr1_3:20953631-20953650 Msa0109050:CDS 50.0%
GGCGGTGGAAACAGTTTCAT+CGG + chr1_3:20953688-20953707 Msa0109050:CDS 50.0%
GGTGGAAACAGTTTCATCGG+AGG + chr1_3:20953691-20953710 Msa0109050:CDS 50.0%
GGAAACAGTTTCATCGGAGG+TGG + chr1_3:20953694-20953713 Msa0109050:CDS 50.0%
TCGGAGGTGGATAGTGATTC+TGG + chr1_3:20953707-20953726 Msa0109050:CDS 50.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG + chr1_3:20952808-20952827 Msa0109050:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG - chr1_3:20952887-20952906 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG - chr1_3:20952893-20952912 None:intergenic 55.0%
TTACAGCGGTTACGAGACGG+TGG - chr1_3:20952905-20952924 None:intergenic 55.0%
GCAGATCGTCACCGTCATGT+CGG + chr1_3:20953541-20953560 Msa0109050:CDS 55.0%
AAGGAATGCATGTTCCGCCG+TGG + chr1_3:20953591-20953610 Msa0109050:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG + chr1_3:20953664-20953683 Msa0109050:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG + chr1_3:20953667-20953686 Msa0109050:CDS 55.0%
TGGTGAGGAGAAAGCTTCGC+CGG + chr1_3:20953748-20953767 Msa0109050:CDS 55.0%
TTCGCCGGAGGAGGTAGTTA+CGG + chr1_3:20953763-20953782 Msa0109050:CDS 55.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG + chr1_3:20952808-20952827 Msa0109050:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG - chr1_3:20952887-20952906 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG - chr1_3:20952893-20952912 None:intergenic 55.0%
TTACAGCGGTTACGAGACGG+TGG - chr1_3:20952905-20952924 None:intergenic 55.0%
GCAGATCGTCACCGTCATGT+CGG + chr1_3:20953541-20953560 Msa0109050:CDS 55.0%
AAGGAATGCATGTTCCGCCG+TGG + chr1_3:20953591-20953610 Msa0109050:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG + chr1_3:20953664-20953683 Msa0109050:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG + chr1_3:20953667-20953686 Msa0109050:CDS 55.0%
TGGTGAGGAGAAAGCTTCGC+CGG + chr1_3:20953748-20953767 Msa0109050:CDS 55.0%
TTCGCCGGAGGAGGTAGTTA+CGG + chr1_3:20953763-20953782 Msa0109050:CDS 55.0%
GATCGTCACCGTCATGTCGG+AGG + chr1_3:20953544-20953563 Msa0109050:CDS 60.0%
GAATGCATGTTCCGCCGTGG+AGG + chr1_3:20953594-20953613 Msa0109050:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG - chr1_3:20953608-20953627 None:intergenic 60.0%
AGCGAAGTGGATCTCTCCGG+CGG + chr1_3:20953634-20953653 Msa0109050:CDS 60.0%
! GCCGCATCGGAGACTTGCTT+TGG - chr1_3:20953668-20953687 None:intergenic 60.0%
TGAGGAGAAAGCTTCGCCGG+AGG + chr1_3:20953751-20953770 Msa0109050:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG + chr1_3:20953808-20953827 Msa0109050:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG - chr1_3:20953830-20953849 None:intergenic 60.0%
GATCGTCACCGTCATGTCGG+AGG + chr1_3:20953544-20953563 Msa0109050:CDS 60.0%
GAATGCATGTTCCGCCGTGG+AGG + chr1_3:20953594-20953613 Msa0109050:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG - chr1_3:20953608-20953627 None:intergenic 60.0%
AGCGAAGTGGATCTCTCCGG+CGG + chr1_3:20953634-20953653 Msa0109050:CDS 60.0%
! GCCGCATCGGAGACTTGCTT+TGG - chr1_3:20953668-20953687 None:intergenic 60.0%
TGAGGAGAAAGCTTCGCCGG+AGG + chr1_3:20953751-20953770 Msa0109050:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG + chr1_3:20953808-20953827 Msa0109050:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG - chr1_3:20953830-20953849 None:intergenic 60.0%
CGTCACCGTCATGTCGGAGG+CGG + chr1_3:20953547-20953566 Msa0109050:CDS 65.0%
CTTCGCCGCCTCCGACATGA+CGG - chr1_3:20953555-20953574 None:intergenic 65.0%
TGCTTTGGCCTAGCTGCCGC+CGG - chr1_3:20953653-20953672 None:intergenic 65.0%
TGTTTCCACCGCCGCCGCAT+CGG - chr1_3:20953681-20953700 None:intergenic 65.0%
GGAGAAAGCTTCGCCGGAGG+AGG + chr1_3:20953754-20953773 Msa0109050:CDS 65.0%
GCCGGAGGAGGTAGTTACGG+CGG + chr1_3:20953766-20953785 Msa0109050:CDS 65.0%
GCCGCCGTAACTACCTCCTC+CGG - chr1_3:20953770-20953789 None:intergenic 65.0%
TCCAGCGTGGCAGTTACCGG+CGG + chr1_3:20953811-20953830 Msa0109050:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG + chr1_3:20953827-20953846 Msa0109050:CDS 65.0%
CGTCACCGTCATGTCGGAGG+CGG + chr1_3:20953547-20953566 Msa0109050:CDS 65.0%
CTTCGCCGCCTCCGACATGA+CGG - chr1_3:20953555-20953574 None:intergenic 65.0%
TGCTTTGGCCTAGCTGCCGC+CGG - chr1_3:20953653-20953672 None:intergenic 65.0%
TGTTTCCACCGCCGCCGCAT+CGG - chr1_3:20953681-20953700 None:intergenic 65.0%
GGAGAAAGCTTCGCCGGAGG+AGG + chr1_3:20953754-20953773 Msa0109050:CDS 65.0%
GCCGGAGGAGGTAGTTACGG+CGG + chr1_3:20953766-20953785 Msa0109050:CDS 65.0%
GCCGCCGTAACTACCTCCTC+CGG - chr1_3:20953770-20953789 None:intergenic 65.0%
TCCAGCGTGGCAGTTACCGG+CGG + chr1_3:20953811-20953830 Msa0109050:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG + chr1_3:20953827-20953846 Msa0109050:CDS 65.0%
GGATCTCTCCGGCGGCAGCT+AGG + chr1_3:20953642-20953661 Msa0109050:CDS 70.0%
GCAAGTCTCCGATGCGGCGG+CGG + chr1_3:20953670-20953689 Msa0109050:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG + chr1_3:20953798-20953817 Msa0109050:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG - chr1_3:20953815-20953834 None:intergenic 70.0%
GGATCTCTCCGGCGGCAGCT+AGG + chr1_3:20953642-20953661 Msa0109050:CDS 70.0%
GCAAGTCTCCGATGCGGCGG+CGG + chr1_3:20953670-20953689 Msa0109050:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG + chr1_3:20953798-20953817 Msa0109050:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG - chr1_3:20953815-20953834 None:intergenic 70.0%
AGTCTCCGATGCGGCGGCGG+TGG + chr1_3:20953673-20953692 Msa0109050:CDS 75.0%
GGCGGCGACAGCGACAGCGA+CGG + chr1_3:20953784-20953803 Msa0109050:CDS 75.0%
AGTCTCCGATGCGGCGGCGG+TGG + chr1_3:20953673-20953692 Msa0109050:CDS 75.0%
GGCGGCGACAGCGACAGCGA+CGG + chr1_3:20953784-20953803 Msa0109050:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 20952255 20954352 20952255 ID=Msa0109050;Name=Msa0109050
chr1_3 mRNA 20952255 20954352 20952255 ID=Msa0109050-mRNA-1;Parent=Msa0109050;Name=Msa0109050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=404|1|1|1|1|1|3|448|356
chr1_3 exon 20952255 20953015 20952255 ID=Msa0109050-mRNA-1:exon:7518;Parent=Msa0109050-mRNA-1
chr1_3 exon 20953108 20953300 20953108 ID=Msa0109050-mRNA-1:exon:7519;Parent=Msa0109050-mRNA-1
chr1_3 exon 20953384 20954352 20953384 ID=Msa0109050-mRNA-1:exon:7520;Parent=Msa0109050-mRNA-1
chr1_3 five_prime_UTR 20952255 20952658 20952255 ID=Msa0109050-mRNA-1:five_prime_utr;Parent=Msa0109050-mRNA-1
chr1_3 CDS 20952659 20953015 20952659 ID=Msa0109050-mRNA-1:cds;Parent=Msa0109050-mRNA-1
chr1_3 CDS 20953108 20953300 20953108 ID=Msa0109050-mRNA-1:cds;Parent=Msa0109050-mRNA-1
chr1_3 CDS 20953384 20953904 20953384 ID=Msa0109050-mRNA-1:cds;Parent=Msa0109050-mRNA-1
chr1_3 three_prime_UTR 20953905 20954352 20953905 ID=Msa0109050-mRNA-1:three_prime_utr;Parent=Msa0109050-mRNA-1
Gene Sequence

>Msa0109050

ATGGCTCCGTTGAAGATCCAACCGATTGACATAGATTCAGAGAAAGCCACTACGGAACTGGTTCGCAATGAACCAGTTTCGAAGTGGAGGTTGAAGAGGTTTTTCGCTTTCGAGAAACCTTTTCCGAAGAACAATACCACTAAAGATGGTGGTGGTGGAGTTGCTGAGTTGGAACCAAGCTCTGTTTGCTTGGCGAAAATGGTTCAGAGTTTCATGGAAGAACAACCGCAACCGCAACTTCAACCACCGTCTCGTAACCGCTGTAACTGCTTCAACGCTAACAGCTCCGACGAAGATGATTTCGATTTCAACGGCTATACACATGAATCAGTCACCGATTCAACTGACTCAGTTAAGAATTTGATTCCTTGTGTAAGTGTTGAAGAACGGAATTTACTAGCAGATGCAACGAAAATTGTTGAGAAGAATAGCAAAATTTACAAAAGAAAAGAAGATTTGATTAAGGTCGTTGCTGAAAAGCTTCAATCTCTTGGTTACGATTCATCCATTTGCAGATCAAAATGGGAGAAAACAAATTCTTGTCCTGCTGGTGATTATCAATTCATTGATGCGATTGTGGAAGGTGAAACGTTGATTATTGATATCGATTTTCGATCGGAGTTTGAAATCGCGAGATCTACAAGTCAGTATAAGACGATTCTTCAATCGCTTCCGTATATTTTCGTCGGGAAAAAGGAGCGGTTGAAGCAGATCGTCACCGTCATGTCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCATGTTCCGCCGTGGAGGAAGCGCGATTACATGTTAGCGAAGTGGATCTCTCCGGCGGCAGCTAGGCCAAAGCAAGTCTCCGATGCGGCGGCGGTGGAAACAGTTTCATCGGAGGTGGATAGTGATTCTGGTGAATTGGAGCTGATTTTTGGTGAGGAGAAAGCTTCGCCGGAGGAGGTAGTTACGGCGGCGACAGCGACAGCGACGGTGAGTCCAGCGTGGCAGTTACCGGCGGTGAAACCGAAGAGTGGTGAAAGAGGAATGAAGGTGACTGGATTAGCTTCTTTGCTGAAGGAGAAACCATAG
Protein sequence

>Msa0109050

MAPLKIQPIDIDSEKATTELVRNEPVSKWRLKRFFAFEKPFPKNNTTKDGGGGVAELEPSSVCLAKMVQSFMEEQPQPQLQPPSRNRCNCFNANSSDEDDFDFNGYTHESVTDSTDSVKNLIPCVSVEERNLLADATKIVEKNSKIYKRKEDLIKVVAEKLQSLGYDSSICRSKWEKTNSCPAGDYQFIDAIVEGETLIIDIDFRSEFEIARSTSQYKTILQSLPYIFVGKKERLKQIVTVMSEAAKQSLKKKGMHVPPWRKRDYMLAKWISPAAARPKQVSDAAAVETVSSEVDSDSGELELIFGEEKASPEEVVTAATATATVSPAWQLPAVKPKSGERGMKVTGLASLLKEKP*