Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157190 | XP_003590190.1 | 78.416 | 505 | 6 | 4 | 1 | 402 | 1 | 505 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157190 | sp|Q94AR8|LEUC_ARATH | 62.475 | 509 | 81 | 6 | 3 | 402 | 2 | 509 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157190 | G7I6Q7 | 78.416 | 505 | 6 | 4 | 1 | 402 | 1 | 505 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0157190 | Msa0656050 | 0.811497 | 6.797065e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157190 | MtrunA17_Chr1g0168711 | 78.416 | 505 | 6 | 4 | 1 | 402 | 1 | 505 | 0.0 | 758 |
| Msa0157190 | MtrunA17_Chr1g0186091 | 55.248 | 505 | 98 | 7 | 8 | 402 | 5 | 491 | 0.0 | 529 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157190 | AT4G13430.1 | 62.475 | 509 | 81 | 6 | 3 | 402 | 2 | 509 | 0.0 | 619 |
Find 109 sgRNAs with CRISPR-Local
Find 669 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACACCTGGGGATAATATT+TGG | 0.139762 | 1_4:-24134309 | Msa0157190:CDS |
| TCATTTACCTTACAGATTAT+TGG | 0.189248 | 1_4:-24131330 | Msa0157190:intron |
| AATAGCTTAAGTTCTAAATT+TGG | 0.206227 | 1_4:+24125536 | None:intergenic |
| ATTTAGAACTTAAGCTATTA+AGG | 0.215016 | 1_4:-24125532 | Msa0157190:three_prime_UTR |
| TAGATTTGATGTCTCAAAAT+TGG | 0.219082 | 1_4:-24127033 | Msa0157190:CDS |
| CAGGGAAGGTGAAATATATT+TGG | 0.262996 | 1_4:-24125697 | Msa0157190:CDS |
| GTTTGTGGCCCTGGTTCTAT+TGG | 0.265255 | 1_4:-24134256 | Msa0157190:CDS |
| TTGCAGACCTTCTGTGTTGC+AGG | 0.266524 | 1_4:+24126395 | None:intergenic |
| GTTCTTTCTGCAGGTTCTCT+TGG | 0.284191 | 1_4:-24133184 | Msa0157190:intron |
| AACCACAAATAGAAACTTTC+CGG | 0.305213 | 1_4:-24125733 | Msa0157190:CDS |
| TCTATATTTGCAGGGTAAAA+AGG | 0.306488 | 1_4:-24126441 | Msa0157190:intron |
| TCTTTGTCTACCTTGCTTGC+TGG | 0.328037 | 1_4:+24127597 | None:intergenic |
| CCCCGGAAAGTTTCTATTTG+TGG | 0.334617 | 1_4:+24125731 | None:intergenic |
| AACTCAACCAATTCATTAAC+AGG | 0.336569 | 1_4:+24125466 | None:intergenic |
| GCTTGCTGGTCACTATATAC+TGG | 0.339417 | 1_4:+24127611 | None:intergenic |
| TTCTTTCTGCAGGTTCTCTT+GGG | 0.341117 | 1_4:-24133183 | Msa0157190:intron |
| TGGCAAACACCTTTGTAATC+TGG | 0.349547 | 1_4:+24133326 | None:intergenic |
| ACTTGTACTGCTGGAGCATT+TGG | 0.355022 | 1_4:-24133147 | Msa0157190:CDS |
| TATTTATATGTAATGCTATC+TGG | 0.356860 | 1_4:+24131058 | None:intergenic |
| TTTGTGGCCCTGGTTCTATT+GGG | 0.356911 | 1_4:-24134255 | Msa0157190:CDS |
| TACACCTGGGGATAATATTT+GGG | 0.359970 | 1_4:-24134308 | Msa0157190:CDS |
| GCATTTGGTCAATTTGCAAC+AGG | 0.376621 | 1_4:-24133132 | Msa0157190:CDS |
| ACTCATGATGTTTGTGGCCC+TGG | 0.393336 | 1_4:-24134265 | Msa0157190:CDS |
| TTGCTCAGGAAGGTCATTGC+AGG | 0.404340 | 1_4:-24133295 | Msa0157190:CDS |
| AATTGTGCCTGTTAATGAAT+TGG | 0.404649 | 1_4:-24125473 | Msa0157190:three_prime_UTR |
| GCAGATGCTGCAGCTGTATA+TGG | 0.406662 | 1_4:+24125669 | None:intergenic |
| ACCACAAATAGAAACTTTCC+GGG | 0.409827 | 1_4:-24125732 | Msa0157190:CDS |
| TACAAATCAATGGAGTTTGT+TGG | 0.414163 | 1_4:-24131282 | Msa0157190:CDS |
| CAGCGTCAACCTTCTTCAAC+TGG | 0.418217 | 1_4:-24134495 | Msa0157190:CDS |
| GACTATGACTGAGAAGATAA+TGG | 0.419716 | 1_4:-24134356 | Msa0157190:CDS |
| CCCCGCACCCAACACAAAAC+CGG | 0.419745 | 1_4:+24133092 | None:intergenic |
| TGCAACATGGTTGTTGAAGC+TGG | 0.422479 | 1_4:-24131103 | Msa0157190:CDS |
| CTTGCCAAAGCACGGTTATC+CGG | 0.433090 | 1_4:+24126887 | None:intergenic |
| GGTCAATTTGCAACAGGGAT+TGG | 0.439036 | 1_4:-24133126 | Msa0157190:CDS |
| TAAACTAATCGAACCTCTCC+TGG | 0.452154 | 1_4:+24133272 | None:intergenic |
| TTGCCACATCGCTCTTGCTC+AGG | 0.452572 | 1_4:-24133309 | Msa0157190:CDS |
| AGAAACTTTCCGGGGCGAAT+GGG | 0.454116 | 1_4:-24125723 | Msa0157190:CDS |
| GCTTACTGCAAGAACTCTCT+TGG | 0.458711 | 1_4:+24125624 | None:intergenic |
| TAGAAACTTTCCGGGGCGAA+TGG | 0.460998 | 1_4:-24125724 | Msa0157190:CDS |
| CGCACGGGTCACACACTAGT+TGG | 0.462948 | 1_4:-24134960 | None:intergenic |
| TCACTATATACTGGTTCATA+TGG | 0.463569 | 1_4:+24127620 | None:intergenic |
| CAGGAAGGTCATTGCAGGCC+AGG | 0.469342 | 1_4:-24133290 | Msa0157190:CDS |
| TTGATGACTCATGATGTTTG+TGG | 0.473686 | 1_4:-24134271 | Msa0157190:CDS |
| TTCACCGGATAACCGTGCTT+TGG | 0.476151 | 1_4:-24126891 | Msa0157190:CDS |
| GATTCTCACACTTGTACTGC+TGG | 0.482639 | 1_4:-24133156 | Msa0157190:CDS |
| CATCGCTTGTGAATATATAG+TGG | 0.485083 | 1_4:+24133551 | None:intergenic |
| TACTTTATGAGAGTATCATA+TGG | 0.496180 | 1_4:-24125412 | Msa0157190:three_prime_UTR |
| TGCAGACCTTCTGTGTTGCA+GGG | 0.496669 | 1_4:+24126396 | None:intergenic |
| AATGTTGCAGCCTCATTCAC+CGG | 0.497013 | 1_4:-24126906 | Msa0157190:intron |
| CTTGTGAATATATAGTGGTC+AGG | 0.502316 | 1_4:+24133556 | None:intergenic |
| GTGTGGAAGAAGGAGGTTGA+AGG | 0.502885 | 1_4:+24134814 | None:intergenic |
| GGAGGTTGAAGGAACAAGAG+AGG | 0.509233 | 1_4:+24134825 | None:intergenic |
| TTGATTGATGTTTGTGTGTG+TGG | 0.511413 | 1_4:+24134854 | None:intergenic |
| GGAGTTTGGTCAGGATGCTA+AGG | 0.513184 | 1_4:-24134221 | Msa0157190:intron |
| TCTTGGATCAGTAACATAAC+CGG | 0.516702 | 1_4:+24125641 | None:intergenic |
| ATGGCGAAAGCTTCTGAGAA+GGG | 0.519753 | 1_4:-24134337 | Msa0157190:CDS |
| GTAGGTTTGGGATCGTGAAA+AGG | 0.519967 | 1_4:-24133590 | Msa0157190:intron |
| AACAGGCACAATTTCTCCAC+TGG | 0.520568 | 1_4:+24125483 | None:intergenic |
| GGGATTGGTAATACTGATGC+CGG | 0.521210 | 1_4:-24133111 | Msa0157190:CDS |
| GCACGGGTCACACACTAGTT+GGG | 0.524212 | 1_4:-24134959 | None:intergenic |
| CAAACTGATCCAGTTGAAGA+AGG | 0.529297 | 1_4:+24134486 | None:intergenic |
| TTCCGGGGCGAATGGGACAC+AGG | 0.531615 | 1_4:-24125716 | Msa0157190:CDS |
| TGCACTCTCTTGCCAAAGCA+CGG | 0.532465 | 1_4:+24126879 | None:intergenic |
| GAGAAGGGGCATGTTACACC+TGG | 0.536724 | 1_4:-24134322 | Msa0157190:CDS |
| AAGTACCTTGGTGTGGAAGA+AGG | 0.538286 | 1_4:+24134804 | None:intergenic |
| ATTGGAGCCACTGGTTGCCA+AGG | 0.549517 | 1_4:-24127015 | Msa0157190:intron |
| TATATAGTGACCAGCAAGCA+AGG | 0.550703 | 1_4:-24127607 | Msa0157190:intron |
| TTGTATTGTATTGTATACAT+TGG | 0.551824 | 1_4:-24125578 | Msa0157190:three_prime_UTR |
| GGGCGAATGGGACACAGGGA+AGG | 0.553009 | 1_4:-24125711 | Msa0157190:CDS |
| TGGTGCAACTTACAAATCAA+TGG | 0.554753 | 1_4:-24131292 | Msa0157190:CDS |
| CACACACAAACATCAATCAA+TGG | 0.556418 | 1_4:-24134851 | Msa0157190:exon |
| CTATTGGTATTTCTTTCCAG+TGG | 0.556874 | 1_4:-24125499 | Msa0157190:three_prime_UTR |
| TGCTTTGGCAAGAGAGTGCA+AGG | 0.558334 | 1_4:-24126876 | Msa0157190:CDS |
| GTTGAAGCTGGAGGAAAGAA+TGG | 0.560027 | 1_4:-24131091 | Msa0157190:CDS |
| GCACGGTTATCCGGTGAATG+AGG | 0.562486 | 1_4:+24126896 | None:intergenic |
| TCTTGTCCCTGCAACACAGA+AGG | 0.562826 | 1_4:-24126402 | Msa0157190:intron |
| TGTCTCAAAATTGGAGCCAC+TGG | 0.563417 | 1_4:-24127024 | Msa0157190:CDS |
| ATTGGTGAAATAAGTGTGGC+TGG | 0.569430 | 1_4:-24131312 | Msa0157190:CDS |
| CATTTGGTCAATTTGCAACA+GGG | 0.572263 | 1_4:-24133131 | Msa0157190:CDS |
| CAATACAATAGAATACAAAA+CGG | 0.574478 | 1_4:+24125593 | None:intergenic |
| CACATCGCTCTTGCTCAGGA+AGG | 0.575169 | 1_4:-24133305 | Msa0157190:CDS |
| AGTACTTGATATCTTGCTCA+TGG | 0.576727 | 1_4:+24133488 | None:intergenic |
| CATTACATATAAATATCTTG+AGG | 0.587292 | 1_4:-24131050 | Msa0157190:intron |
| AGGTCATTGCAGGCCAGGAG+AGG | 0.593257 | 1_4:-24133285 | Msa0157190:intron |
| TTGAGAAGATGATGTAAAAG+CGG | 0.594135 | 1_4:+24134578 | None:intergenic |
| GCTGCAGCATCTGCATTGAC+CGG | 0.594770 | 1_4:-24125660 | Msa0157190:CDS |
| TCCCTGTGTCCCATTCGCCC+CGG | 0.605947 | 1_4:+24125714 | None:intergenic |
| AATGGCGAAAGCTTCTGAGA+AGG | 0.607979 | 1_4:-24134338 | Msa0157190:CDS |
| TCAACCCAAATATTATCCCC+AGG | 0.614366 | 1_4:+24134304 | None:intergenic |
| GGTTGACGCTGTGTCTGTTG+AGG | 0.615350 | 1_4:+24134507 | None:intergenic |
| TCCGGGGCGAATGGGACACA+GGG | 0.617857 | 1_4:-24125715 | Msa0157190:CDS |
| TGGCGAAAGCTTCTGAGAAG+GGG | 0.629318 | 1_4:-24134336 | Msa0157190:CDS |
| AGAAGGGGCATGTTACACCT+GGG | 0.630209 | 1_4:-24134321 | Msa0157190:CDS |
| AAGAAGAAAGTACCTTGGTG+TGG | 0.632691 | 1_4:+24134797 | None:intergenic |
| CAGGTAAATCCAGATTACAA+AGG | 0.639525 | 1_4:-24133335 | Msa0157190:CDS |
| TGTTGCAGGGACAAGAAATG+TGG | 0.650698 | 1_4:+24126409 | None:intergenic |
| GGACTAACCTTGGCAACCAG+TGG | 0.655420 | 1_4:+24127008 | None:intergenic |
| ATAACAATTGAAGATGACAA+AGG | 0.657480 | 1_4:+24125379 | None:intergenic |
| AACCTCCTTCTTCCACACCA+AGG | 0.662557 | 1_4:-24134809 | Msa0157190:intron |
| TACCTTGGTGTGGAAGAAGG+AGG | 0.663792 | 1_4:+24134807 | None:intergenic |
| ATTGATGTTTGTGTGTGTGG+CGG | 0.665004 | 1_4:+24134857 | None:intergenic |
| TTATATGTAATGCTATCTGG+AGG | 0.666348 | 1_4:+24131061 | None:intergenic |
| CTTCCTGAGCAAGAGCGATG+TGG | 0.677611 | 1_4:+24133306 | None:intergenic |
| GAAGGGGCATGTTACACCTG+GGG | 0.687521 | 1_4:-24134320 | Msa0157190:CDS |
| ACGGATGACATTGTGCAACA+TGG | 0.689455 | 1_4:-24131116 | Msa0157190:CDS |
| GTTGCAGGGACAAGAAATGT+GGG | 0.707328 | 1_4:+24126410 | None:intergenic |
| CCACAAATAGAAACTTTCCG+GGG | 0.722228 | 1_4:-24125731 | Msa0157190:CDS |
| GATTATTGGTGAAATAAGTG+TGG | 0.724786 | 1_4:-24131316 | Msa0157190:CDS |
| AACATGGTTGTTGAAGCTGG+AGG | 0.764525 | 1_4:-24131100 | Msa0157190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr1_4:24128397-24128416 | None:intergenic | 10.0% |
| !!! | TATGAAAAAACAAGTTTTTT+GGG | + | chr1_4:24125560-24125579 | None:intergenic | 15.0% |
| !!! | TTATGAAAAAACAAGTTTTT+TGG | + | chr1_4:24125561-24125580 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATAGTTTTGGT+TGG | - | chr1_4:24125893-24125912 | Msa0157190:intron | 15.0% |
| !!! | CATGATTTTTTTTACTTTAA+AGG | - | chr1_4:24127320-24127339 | Msa0157190:intron | 15.0% |
| !!! | TATTTATTTTGATATCACAA+GGG | + | chr1_4:24127982-24128001 | None:intergenic | 15.0% |
| !!! | ATATTTATTTTGATATCACA+AGG | + | chr1_4:24127983-24128002 | None:intergenic | 15.0% |
| !! | TGTGATATCAAAATAAATAT+AGG | - | chr1_4:24127983-24128002 | Msa0157190:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1_4:24128719-24128738 | None:intergenic | 15.0% |
| !!! | TAAGTACATTTTTTTTTGTA+GGG | + | chr1_4:24128335-24128354 | None:intergenic | 15.0% |
| !!! | ATAAGTACATTTTTTTTTGT+AGG | + | chr1_4:24128336-24128355 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr1_4:24128368-24128387 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr1_4:24128369-24128388 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr1_4:24128528-24128547 | Msa0157190:intron | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr1_4:24128563-24128582 | Msa0157190:intron | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr1_4:24128647-24128666 | Msa0157190:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr1_4:24128719-24128738 | Msa0157190:intron | 15.0% |
| !! | TTCTTTATTGTATTTAAGAA+TGG | - | chr1_4:24129429-24129448 | Msa0157190:intron | 15.0% |
| !! | AAAGTAAAACATAATAGAAA+TGG | - | chr1_4:24129525-24129544 | Msa0157190:intron | 15.0% |
| !!! | TGTCATATTTTTCTTATTAT+TGG | - | chr1_4:24132498-24132517 | Msa0157190:intron | 15.0% |
| !!! | TTGTTTCCATTTTATTTTTA+GGG | - | chr1_4:24132665-24132684 | Msa0157190:intron | 15.0% |
| !! | AATCAAATAACATCTTAAAA+AGG | - | chr1_4:24132981-24133000 | Msa0157190:intron | 15.0% |
| !! | ATCAAATAACATCTTAAAAA+GGG | - | chr1_4:24132982-24133001 | Msa0157190:intron | 15.0% |
| !! | AAAATATATTAAAAGATGCT+AGG | + | chr1_4:24134241-24134260 | None:intergenic | 15.0% |
| !!! | AGCATCTTTTAATATATTTT+TGG | - | chr1_4:24134241-24134260 | Msa0157190:CDS | 15.0% |
| !! | AAAAAATCACAAATCCAAAA+GGG | + | chr1_4:24125873-24125892 | None:intergenic | 20.0% |
| !! | AAAAAAATCACAAATCCAAA+AGG | + | chr1_4:24125874-24125893 | None:intergenic | 20.0% |
| !! | AATTAAACCGAAGAAATATA+TGG | - | chr1_4:24126289-24126308 | Msa0157190:intron | 20.0% |
| !! | ATTAAACCGAAGAAATATAT+GGG | - | chr1_4:24126290-24126309 | Msa0157190:intron | 20.0% |
| !! | GCTATAAAGAAAAAATATTG+TGG | - | chr1_4:24126587-24126606 | Msa0157190:intron | 20.0% |
| !! | TTATAAATCATGTGATTCAT+AGG | - | chr1_4:24126611-24126630 | Msa0157190:intron | 20.0% |
| !!! | TAAAGATCTCAGTAATTTTA+AGG | - | chr1_4:24126866-24126885 | Msa0157190:CDS | 20.0% |
| !! | TGATTTCTTCAATATAGATT+TGG | - | chr1_4:24126901-24126920 | Msa0157190:intron | 20.0% |
| !! | TTTAATATGAATGATATCGT+TGG | - | chr1_4:24126947-24126966 | Msa0157190:intron | 20.0% |
| !! | AGTAAAAAAAATCATGCTAT+AGG | + | chr1_4:24127316-24127335 | None:intergenic | 20.0% |
| !!! | CAATCAAATAAGTCATTTTA+TGG | + | chr1_4:24127562-24127581 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGATATCACAAG+GGG | + | chr1_4:24127981-24128000 | None:intergenic | 20.0% |
| !! | AAATAGAGAATCAGAAATTA+AGG | - | chr1_4:24128201-24128220 | Msa0157190:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr1_4:24128617-24128636 | None:intergenic | 20.0% |
| !!! | ATTTGGGTTAATTATGTTTT+TGG | + | chr1_4:24128777-24128796 | None:intergenic | 20.0% |
| !! | AAAAACATAATTAACCCAAA+TGG | - | chr1_4:24128776-24128795 | Msa0157190:intron | 20.0% |
| !!! | TAAAAAGGTATTTTCCATTT+GGG | + | chr1_4:24128793-24128812 | None:intergenic | 20.0% |
| !!! | ATAAAAAGGTATTTTCCATT+TGG | + | chr1_4:24128794-24128813 | None:intergenic | 20.0% |
| !! | TATATATTCCATATTAATGC+AGG | - | chr1_4:24128820-24128839 | Msa0157190:intron | 20.0% |
| !! | TATTTATATGTAATGCTATC+TGG | + | chr1_4:24129266-24129285 | None:intergenic | 20.0% |
| !! | CATTACATATAAATATCTTG+AGG | - | chr1_4:24129271-24129290 | Msa0157190:intron | 20.0% |
| !! | ATTGTATTTAAGAATGGTTT+AGG | - | chr1_4:24129435-24129454 | Msa0157190:intron | 20.0% |
| !! | TAAAACATAATAGAAATGGT+AGG | - | chr1_4:24129529-24129548 | Msa0157190:intron | 20.0% |
| !! | TAAATAAAAAAGCAACTTGT+TGG | + | chr1_4:24129893-24129912 | None:intergenic | 20.0% |
| !! | TAATTGAAATTAAGGAATAC+TGG | - | chr1_4:24129926-24129945 | Msa0157190:intron | 20.0% |
| !! | TTTCCTTATAGATATGAATT+AGG | - | chr1_4:24130364-24130383 | Msa0157190:intron | 20.0% |
| !! | CAATAAATTTGGAAACTTAA+TGG | + | chr1_4:24131809-24131828 | None:intergenic | 20.0% |
| !! | CATTAAGTTTCCAAATTTAT+TGG | - | chr1_4:24131807-24131826 | Msa0157190:intron | 20.0% |
| !!! | TTTTCATAAGTTATCTTAGA+GGG | - | chr1_4:24132258-24132277 | Msa0157190:intron | 20.0% |
| !!! | GTTGTTTCCATTTTATTTTT+AGG | - | chr1_4:24132664-24132683 | Msa0157190:intron | 20.0% |
| !! | TCAAATAACATCTTAAAAAG+GGG | - | chr1_4:24132983-24133002 | Msa0157190:intron | 20.0% |
| !!! | TACTAATACTGTTTTTTTGT+TGG | - | chr1_4:24133243-24133262 | Msa0157190:intron | 20.0% |
| !! | TAATATCATAGATATGCAAT+AGG | + | chr1_4:24133576-24133595 | None:intergenic | 20.0% |
| !!! | AAAAAAGCAGTATTTTCAAT+TGG | - | chr1_4:24133602-24133621 | Msa0157190:intron | 20.0% |
| !! | TAAATTTGCATGGTAAATTA+TGG | - | chr1_4:24133997-24134016 | Msa0157190:intron | 20.0% |
| !!! | ATTTTCTAATGCTCTATTAA+TGG | - | chr1_4:24134029-24134048 | Msa0157190:intron | 20.0% |
| !! | TCTCATTAATTACAAAGAAA+CGG | + | chr1_4:24134400-24134419 | None:intergenic | 20.0% |
| !! | CAATACAATAGAATACAAAA+CGG | + | chr1_4:24134731-24134750 | None:intergenic | 20.0% |
| !! | TTGTATTGTATTGTATACAT+TGG | - | chr1_4:24134743-24134762 | Msa0157190:intron | 20.0% |
| !!! | AATAGCTTAAGTTCTAAATT+TGG | + | chr1_4:24134788-24134807 | None:intergenic | 20.0% |
| !!! | ATTTAGAACTTAAGCTATTA+AGG | - | chr1_4:24134789-24134808 | Msa0157190:intron | 20.0% |
| !!! | NNNNNNCTTTTTGGGCAAAA+GGG | + | chr1_4:24125584-24125603 | None:intergenic | 25.0% |
| !!! | NNNNNNNCTTTTTGGGCAAA+AGG | + | chr1_4:24125585-24125604 | None:intergenic | 25.0% |
| !!! | CACTTATTTTCATTTTCAGA+AGG | - | chr1_4:24125708-24125727 | Msa0157190:CDS | 25.0% |
| !!! | TTTAGTGTTTTTTGGTTTGA+TGG | - | chr1_4:24125919-24125938 | Msa0157190:intron | 25.0% |
| !!! | TTAGTGTTTTTTGGTTTGAT+GGG | - | chr1_4:24125920-24125939 | Msa0157190:intron | 25.0% |
| !!! | TTCTATTGGGATTTTTAAGA+AGG | - | chr1_4:24126079-24126098 | Msa0157190:intron | 25.0% |
| ! | AATTGTGTGATAGTTATTGA+AGG | - | chr1_4:24126241-24126260 | Msa0157190:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr1_4:24126418-24126437 | None:intergenic | 25.0% |
| !! | TGACAACATTTTGTAGTAAT+TGG | - | chr1_4:24126423-24126442 | Msa0157190:CDS | 25.0% |
| ! | AATAGCAATTTGTGTAAAAC+AGG | - | chr1_4:24126459-24126478 | Msa0157190:intron | 25.0% |
| ! | ATAGCAATTTGTGTAAAACA+GGG | - | chr1_4:24126460-24126479 | Msa0157190:intron | 25.0% |
| ! | CTAGATACATGGTTATAAAA+GGG | + | chr1_4:24126565-24126584 | None:intergenic | 25.0% |
| ! | ACTAGATACATGGTTATAAA+AGG | + | chr1_4:24126566-24126585 | None:intergenic | 25.0% |
| !! | TGATTCATGTTTTGCTAATT+AGG | - | chr1_4:24127115-24127134 | Msa0157190:intron | 25.0% |
| !! | TATTGATTGTTTATGCAAAC+CGG | + | chr1_4:24127413-24127432 | None:intergenic | 25.0% |
| ! | ATGTAATCTTAGAGTTATGA+TGG | + | chr1_4:24127497-24127516 | None:intergenic | 25.0% |
| !! | GTTAATCTACTTTATTTCCT+TGG | + | chr1_4:24127714-24127733 | None:intergenic | 25.0% |
| ! | AAAGGGTAAGCATAAATTTA+AGG | + | chr1_4:24127777-24127796 | None:intergenic | 25.0% |
| ! | TTTAATATCTATGCCTTAGA+GGG | - | chr1_4:24127934-24127953 | Msa0157190:intron | 25.0% |
| ! | ATCTACGTACATATACATTA+TGG | + | chr1_4:24128021-24128040 | None:intergenic | 25.0% |
| ! | AAAAGAATTGGAGATAATGT+TGG | - | chr1_4:24128175-24128194 | Msa0157190:intron | 25.0% |
| ! | TTTCTTGAAGCTTACAAAAA+TGG | - | chr1_4:24128226-24128245 | Msa0157190:intron | 25.0% |
| !! | GAAAGGGTTAATTATGTTTT+TGG | - | chr1_4:24128248-24128267 | Msa0157190:intron | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr1_4:24128593-24128612 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr1_4:24128658-24128677 | Msa0157190:intron | 25.0% |
| !!! | TGAGTGTAGAAATTTTTTGT+AGG | - | chr1_4:24128689-24128708 | Msa0157190:intron | 25.0% |
| !!! | GAGTGTAGAAATTTTTTGTA+GGG | - | chr1_4:24128690-24128709 | Msa0157190:intron | 25.0% |
| ! | TCATTTACCTTACAGATTAT+TGG | - | chr1_4:24128991-24129010 | Msa0157190:intron | 25.0% |
| ! | TATTTCACCAATAATCTGTA+AGG | + | chr1_4:24129001-24129020 | None:intergenic | 25.0% |
| ! | AACTAAGATACTCTAATGTA+GGG | + | chr1_4:24130295-24130314 | None:intergenic | 25.0% |
| ! | ACTCCTAATTCATATCTATA+AGG | + | chr1_4:24130370-24130389 | None:intergenic | 25.0% |
| ! | TCGAATAGTTTATAAAGGTA+AGG | + | chr1_4:24130417-24130436 | None:intergenic | 25.0% |
| ! | CATGAACATTTGATATAAGT+GGG | - | chr1_4:24130460-24130479 | Msa0157190:intron | 25.0% |
| ! | ATGAACATTTGATATAAGTG+GGG | - | chr1_4:24130461-24130480 | Msa0157190:intron | 25.0% |
| ! | TGAACATGTGTTTATAAGTT+AGG | - | chr1_4:24130663-24130682 | Msa0157190:intron | 25.0% |
| ! | GAACATGTGTTTATAAGTTA+GGG | - | chr1_4:24130664-24130683 | Msa0157190:intron | 25.0% |
| ! | AACTATATATAACTACCAAC+AGG | + | chr1_4:24131206-24131225 | None:intergenic | 25.0% |
| !! | TTATATATAGTTTGTGCCTT+TGG | - | chr1_4:24131214-24131233 | Msa0157190:intron | 25.0% |
| !! | TATATATAGTTTGTGCCTTT+GGG | - | chr1_4:24131215-24131234 | Msa0157190:intron | 25.0% |
| !!! | TTTTTTTTTTTGCTTGCAAC+TGG | + | chr1_4:24131266-24131285 | None:intergenic | 25.0% |
| ! | TATTAATGTATCTCAACTTG+TGG | + | chr1_4:24131314-24131333 | None:intergenic | 25.0% |
| ! | TAGAAAGAAGCGAAATAAAT+AGG | - | chr1_4:24131332-24131351 | Msa0157190:intron | 25.0% |
| ! | ATTACTAGTGAATCACAAAA+AGG | + | chr1_4:24132019-24132038 | None:intergenic | 25.0% |
| ! | GTAATAATGAGGTTAAAACT+TGG | - | chr1_4:24132034-24132053 | Msa0157190:intron | 25.0% |
| ! | TATATATTCTAACACTCTCA+AGG | + | chr1_4:24132069-24132088 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr1_4:24132151-24132170 | None:intergenic | 25.0% |
| !! | GTTTTCATAAGTTATCTTAG+AGG | - | chr1_4:24132257-24132276 | Msa0157190:intron | 25.0% |
| !! | ATCTTTGTTATGATGTAATG+TGG | - | chr1_4:24132469-24132488 | Msa0157190:intron | 25.0% |
| !!! | TAAGTTTTTCTGTATTGACA+TGG | - | chr1_4:24132561-24132580 | Msa0157190:intron | 25.0% |
| ! | TCCTAAACACTGAATATAAA+GGG | + | chr1_4:24132772-24132791 | None:intergenic | 25.0% |
| ! | TTCCTAAACACTGAATATAA+AGG | + | chr1_4:24132773-24132792 | None:intergenic | 25.0% |
| ! | TATCAATTCAAAGTGATAGA+TGG | + | chr1_4:24132807-24132826 | None:intergenic | 25.0% |
| ! | CAAATAACATCTTAAAAAGG+GGG | - | chr1_4:24132984-24133003 | Msa0157190:intron | 25.0% |
| ! | CTTGTAAATTAACAACGTAA+AGG | - | chr1_4:24133133-24133152 | Msa0157190:CDS | 25.0% |
| ! | CTGTATAAAATATCAAACAC+TGG | + | chr1_4:24133163-24133182 | None:intergenic | 25.0% |
| !! | CAGTGTTTGATATTTTATAC+AGG | - | chr1_4:24133161-24133180 | Msa0157190:CDS | 25.0% |
| !! | ATTTTATACAGGAGAAAAAC+TGG | - | chr1_4:24133172-24133191 | Msa0157190:CDS | 25.0% |
| ! | ACAGAAATATTAGTATCCAT+TGG | - | chr1_4:24133203-24133222 | Msa0157190:intron | 25.0% |
| !! | TATTAGTATCCATTGGTAAT+CGG | - | chr1_4:24133210-24133229 | Msa0157190:intron | 25.0% |
| ! | TAGATTTGATGTCTCAAAAT+TGG | - | chr1_4:24133288-24133307 | Msa0157190:CDS | 25.0% |
| ! | TGAAGTAATTACATTAGTTG+AGG | + | chr1_4:24133396-24133415 | None:intergenic | 25.0% |
| ! | AAAATTGACAGAGTATACAT+AGG | - | chr1_4:24133473-24133492 | Msa0157190:CDS | 25.0% |
| !! | TGAAATTTTTCCTATGCTTA+TGG | - | chr1_4:24133795-24133814 | Msa0157190:intron | 25.0% |
| !! | ATATCATGTTTTTCATTAGC+GGG | + | chr1_4:24133861-24133880 | None:intergenic | 25.0% |
| !! | GATATCATGTTTTTCATTAG+CGG | + | chr1_4:24133862-24133881 | None:intergenic | 25.0% |
| ! | AACATGATATCTATATTTGC+AGG | - | chr1_4:24133871-24133890 | Msa0157190:intron | 25.0% |
| ! | ACATGATATCTATATTTGCA+GGG | - | chr1_4:24133872-24133891 | Msa0157190:intron | 25.0% |
| ! | CATCTGTTAATAAATTTGCA+TGG | - | chr1_4:24133987-24134006 | Msa0157190:intron | 25.0% |
| !!! | TATTAATGGAATTTCAGGTT+TGG | - | chr1_4:24134043-24134062 | Msa0157190:intron | 25.0% |
| ! | ATTAATTACAAAGAAACGGT+TGG | + | chr1_4:24134396-24134415 | None:intergenic | 25.0% |
| ! | TTTGTAATTAATGAGAACTG+TGG | - | chr1_4:24134404-24134423 | Msa0157190:intron | 25.0% |
| !! | TTAAGGTTTTACAACTCTAT+TGG | - | chr1_4:24134806-24134825 | Msa0157190:intron | 25.0% |
| !!! | TACTTTATGAGAGTATCATA+TGG | - | chr1_4:24134909-24134928 | Msa0157190:five_prime_UTR | 25.0% |
| ! | ATAACAATTGAAGATGACAA+AGG | + | chr1_4:24134945-24134964 | None:intergenic | 25.0% |
| TTGAGAAGATGATGTAAAAG+CGG | + | chr1_4:24125746-24125765 | None:intergenic | 30.0% | |
| !!! | GTTGGTGATTTAGTGTTTTT+TGG | - | chr1_4:24125911-24125930 | Msa0157190:intron | 30.0% |
| !!! | TTTGGTTTGATGGGTTTTTT+AGG | - | chr1_4:24125929-24125948 | Msa0157190:intron | 30.0% |
| TAAAAATCCCAATAGAACCA+GGG | + | chr1_4:24126076-24126095 | None:intergenic | 30.0% | |
| TTAAAAATCCCAATAGAACC+AGG | + | chr1_4:24126077-24126096 | None:intergenic | 30.0% | |
| !! | TGATTTGCATGTCTTAGTTT+TGG | - | chr1_4:24126129-24126148 | Msa0157190:intron | 30.0% |
| !!! | TGGAACTTTTTGATTTGTTG+TGG | - | chr1_4:24126149-24126168 | Msa0157190:intron | 30.0% |
| !!! | ACTTTTTGATTTGTTGTGGT+TGG | - | chr1_4:24126153-24126172 | Msa0157190:intron | 30.0% |
| GTTGGTTAATGTTATGGAAA+TGG | - | chr1_4:24126171-24126190 | Msa0157190:intron | 30.0% | |
| !! | GTTATGGAAATGGATTTTAC+TGG | - | chr1_4:24126181-24126200 | Msa0157190:intron | 30.0% |
| TTTACTGGAATTGTACAGAT+TGG | - | chr1_4:24126196-24126215 | Msa0157190:intron | 30.0% | |
| ! | TACAGATTGGTTAGGAAATT+TGG | - | chr1_4:24126209-24126228 | Msa0157190:intron | 30.0% |
| TGATAGTTATTGAAGGTGAT+AGG | - | chr1_4:24126248-24126267 | Msa0157190:intron | 30.0% | |
| CTACTACCCATATATTTCTT+CGG | + | chr1_4:24126299-24126318 | None:intergenic | 30.0% | |
| AATTTGTGTAAAACAGGGTA+AGG | - | chr1_4:24126465-24126484 | Msa0157190:intron | 30.0% | |
| CTTTATAGCTACTAGATACA+TGG | + | chr1_4:24126576-24126595 | None:intergenic | 30.0% | |
| TAAATCATGTGATTCATAGG+AGG | - | chr1_4:24126614-24126633 | Msa0157190:intron | 30.0% | |
| TCTCAGCATTATAGCATATA+CGG | + | chr1_4:24126674-24126693 | None:intergenic | 30.0% | |
| ! | ATGAATGATATCGTTGGTAA+TGG | - | chr1_4:24126953-24126972 | Msa0157190:intron | 30.0% |
| ! | TCTTAGAGTTATGATGGAAA+AGG | + | chr1_4:24127491-24127510 | None:intergenic | 30.0% |
| ! | AAGGTTTTCAATTGAGCATT+AGG | - | chr1_4:24127806-24127825 | Msa0157190:intron | 30.0% |
| GTTTAATATCTATGCCTTAG+AGG | - | chr1_4:24127933-24127952 | Msa0157190:intron | 30.0% | |
| ATGTACGTAGATAGTAACAA+TGG | - | chr1_4:24128029-24128048 | Msa0157190:intron | 30.0% | |
| TAGTAACAATGGAACAAGAT+TGG | - | chr1_4:24128040-24128059 | Msa0157190:intron | 30.0% | |
| !! | ACAACACAATTGCTGTTTAA+GGG | + | chr1_4:24128148-24128167 | None:intergenic | 30.0% |
| !! | AACAACACAATTGCTGTTTA+AGG | + | chr1_4:24128149-24128168 | None:intergenic | 30.0% |
| GTTGTTATGTGGAAAAGAAT+TGG | - | chr1_4:24128163-24128182 | Msa0157190:intron | 30.0% | |
| TGAAGCTTACAAAAATGGAA+AGG | - | chr1_4:24128231-24128250 | Msa0157190:intron | 30.0% | |
| GAAGCTTACAAAAATGGAAA+GGG | - | chr1_4:24128232-24128251 | Msa0157190:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr1_4:24128734-24128753 | None:intergenic | 30.0% | |
| ! | CAAGTTTAGAACACTATGAA+AGG | - | chr1_4:24128431-24128450 | Msa0157190:intron | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr1_4:24128566-24128585 | Msa0157190:intron | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr1_4:24128734-24128753 | Msa0157190:intron | 30.0% | |
| ! | TTACAAGGTTGCAATTTTGT+AGG | - | chr1_4:24128749-24128768 | Msa0157190:intron | 30.0% |
| ! | TACAAGGTTGCAATTTTGTA+GGG | - | chr1_4:24128750-24128769 | Msa0157190:intron | 30.0% |
| ATTACAAATCTCAAAGTTGG+AGG | + | chr1_4:24128848-24128867 | None:intergenic | 30.0% | |
| !! | TCCAACTTTGAGATTTGTAA+TGG | - | chr1_4:24128847-24128866 | Msa0157190:intron | 30.0% |
| TCCATTACAAATCTCAAAGT+TGG | + | chr1_4:24128851-24128870 | None:intergenic | 30.0% | |
| !! | ACTTTGAGATTTGTAATGGA+TGG | - | chr1_4:24128851-24128870 | Msa0157190:intron | 30.0% |
| AAACAAGCTAACTAAAATCC+AGG | + | chr1_4:24128928-24128947 | None:intergenic | 30.0% | |
| GTTTGCATACATTAGCAATA+TGG | - | chr1_4:24128944-24128963 | Msa0157190:intron | 30.0% | |
| GATTATTGGTGAAATAAGTG+TGG | - | chr1_4:24129005-24129024 | Msa0157190:intron | 30.0% | |
| TACAAATCAATGGAGTTTGT+TGG | - | chr1_4:24129039-24129058 | Msa0157190:intron | 30.0% | |
| !! | TTTTGATAACTTGTCCCTTT+TGG | - | chr1_4:24129170-24129189 | Msa0157190:intron | 30.0% |
| TTATATGTAATGCTATCTGG+AGG | + | chr1_4:24129263-24129282 | None:intergenic | 30.0% | |
| TTTCTGTCCATTACTATCTA+CGG | + | chr1_4:24129468-24129487 | None:intergenic | 30.0% | |
| TAATAGAAATGGTAGGAAAG+TGG | - | chr1_4:24129536-24129555 | Msa0157190:intron | 30.0% | |
| ! | TGCAAAGGAGTTATTTCATT+TGG | + | chr1_4:24129704-24129723 | None:intergenic | 30.0% |
| ACATTGACGTTTCTCTTATA+TGG | - | chr1_4:24129766-24129785 | Msa0157190:intron | 30.0% | |
| CATTGACGTTTCTCTTATAT+GGG | - | chr1_4:24129767-24129786 | Msa0157190:intron | 30.0% | |
| TGAAATTAAGGAATACTGGT+TGG | - | chr1_4:24129930-24129949 | Msa0157190:intron | 30.0% | |
| CAAAATGCTGTCATTAGATA+AGG | - | chr1_4:24130072-24130091 | Msa0157190:intron | 30.0% | |
| GTACAAAATATGTCAGTGTT+TGG | - | chr1_4:24130109-24130128 | Msa0157190:intron | 30.0% | |
| AAAATATGTCAGTGTTTGGT+TGG | - | chr1_4:24130113-24130132 | Msa0157190:intron | 30.0% | |
| AAATATGTCAGTGTTTGGTT+GGG | - | chr1_4:24130114-24130133 | Msa0157190:intron | 30.0% | |
| TGATAGAGAAATAACATGAC+TGG | + | chr1_4:24130241-24130260 | None:intergenic | 30.0% | |
| !! | AGTCATGTTATTTCTCTATC+AGG | - | chr1_4:24130240-24130259 | Msa0157190:intron | 30.0% |
| !! | GTTATTTCTCTATCAGGTTT+CGG | - | chr1_4:24130246-24130265 | Msa0157190:intron | 30.0% |
| ! | TTATTTCTCTATCAGGTTTC+GGG | - | chr1_4:24130247-24130266 | Msa0157190:intron | 30.0% |
| CAACTAAGATACTCTAATGT+AGG | + | chr1_4:24130296-24130315 | None:intergenic | 30.0% | |
| TTATAAAGGTAAGGAGTGAA+TGG | + | chr1_4:24130408-24130427 | None:intergenic | 30.0% | |
| GCATGAACATTTGATATAAG+TGG | - | chr1_4:24130459-24130478 | Msa0157190:intron | 30.0% | |
| TGAACATTTGATATAAGTGG+GGG | - | chr1_4:24130462-24130481 | Msa0157190:intron | 30.0% | |
| ACGCAATCAAATTATTGAGA+GGG | - | chr1_4:24130753-24130772 | Msa0157190:intron | 30.0% | |
| !! | AAAGCTCATCATATTTTTGC+AGG | + | chr1_4:24130826-24130845 | None:intergenic | 30.0% |
| ! | CTTTGCATTTTTGTGTTTGA+AGG | - | chr1_4:24130842-24130861 | Msa0157190:intron | 30.0% |
| ATTGTAGACACAGAAAGAAA+TGG | + | chr1_4:24130937-24130956 | None:intergenic | 30.0% | |
| TTACCACATCCTATTTATCT+AGG | - | chr1_4:24130963-24130982 | Msa0157190:intron | 30.0% | |
| TACCACATCCTATTTATCTA+GGG | - | chr1_4:24130964-24130983 | Msa0157190:intron | 30.0% | |
| AAGCCAACTGAAGATAATAA+TGG | + | chr1_4:24131165-24131184 | None:intergenic | 30.0% | |
| ATTATTATCTTCAGTTGGCT+TGG | - | chr1_4:24131164-24131183 | Msa0157190:intron | 30.0% | |
| AGCAGCTATTTAATGACAAT+GGG | + | chr1_4:24131384-24131403 | None:intergenic | 30.0% | |
| TAGCAGCTATTTAATGACAA+TGG | + | chr1_4:24131385-24131404 | None:intergenic | 30.0% | |
| ATGTTGTCAAATAGTGACTA+TGG | - | chr1_4:24131473-24131492 | Msa0157190:intron | 30.0% | |
| ACTTAATGGTTTACAGATAG+TGG | + | chr1_4:24131795-24131814 | None:intergenic | 30.0% | |
| AAAGAGCAAGAAAACATAAG+AGG | + | chr1_4:24131841-24131860 | None:intergenic | 30.0% | |
| !! | AAGCTTTTAAGTGCTTGTTT+TGG | - | chr1_4:24131862-24131881 | Msa0157190:intron | 30.0% |
| GTGATTCACTAGTAATAATG+AGG | - | chr1_4:24132023-24132042 | Msa0157190:intron | 30.0% | |
| ! | TTTTAGACTATGATCCTGTT+TGG | - | chr1_4:24132134-24132153 | Msa0157190:intron | 30.0% |
| GAACTTATCGAAACAGTTTA+TGG | + | chr1_4:24132320-24132339 | None:intergenic | 30.0% | |
| GTCTTGCCCTAAAAATAAAA+TGG | + | chr1_4:24132674-24132693 | None:intergenic | 30.0% | |
| !! | TCACTATATACTGGTTCATA+TGG | + | chr1_4:24132704-24132723 | None:intergenic | 30.0% |
| TAAACACTGAATATAAAGGG+GGG | + | chr1_4:24132769-24132788 | None:intergenic | 30.0% | |
| CTAAACACTGAATATAAAGG+GGG | + | chr1_4:24132770-24132789 | None:intergenic | 30.0% | |
| CCTAAACACTGAATATAAAG+GGG | + | chr1_4:24132771-24132790 | None:intergenic | 30.0% | |
| TGATAAATTTGATGAGCAAG+CGG | - | chr1_4:24132844-24132863 | Msa0157190:intron | 30.0% | |
| !! | GTTGTTTTCTACTAACAGAA+TGG | + | chr1_4:24132883-24132902 | None:intergenic | 30.0% |
| ATAGTAATTATGCTCCCATA+GGG | + | chr1_4:24132934-24132953 | None:intergenic | 30.0% | |
| AATAGTAATTATGCTCCCAT+AGG | + | chr1_4:24132935-24132954 | None:intergenic | 30.0% | |
| ATTAAGCTCATATGCAACAT+GGG | + | chr1_4:24133051-24133070 | None:intergenic | 30.0% | |
| AATTAAGCTCATATGCAACA+TGG | + | chr1_4:24133052-24133071 | None:intergenic | 30.0% | |
| TGAATAAAACCGATTACCAA+TGG | + | chr1_4:24133222-24133241 | None:intergenic | 30.0% | |
| ATCAAAGGAAATGCAATCAA+AGG | + | chr1_4:24133337-24133356 | None:intergenic | 30.0% | |
| AGTAACAACATCTTGATCAA+AGG | + | chr1_4:24133352-24133371 | None:intergenic | 30.0% | |
| AGTATACATAGGATCTTGTA+CGG | - | chr1_4:24133484-24133503 | Msa0157190:CDS | 30.0% | |
| TGGAAAAACAGAAGATTTCA+TGG | - | chr1_4:24133508-24133527 | Msa0157190:CDS | 30.0% | |
| ! | AAAGCAGTATTTTCAATTGG+TGG | - | chr1_4:24133605-24133624 | Msa0157190:intron | 30.0% |
| ATCCACCATATAAACACATT+GGG | + | chr1_4:24133724-24133743 | None:intergenic | 30.0% | |
| AATCCACCATATAAACACAT+TGG | + | chr1_4:24133725-24133744 | None:intergenic | 30.0% | |
| !!! | GTGTTTATATGGTGGATTTT+AGG | - | chr1_4:24133727-24133746 | Msa0157190:intron | 30.0% |
| CACAAAAAATCCATAAGCAT+AGG | + | chr1_4:24133808-24133827 | None:intergenic | 30.0% | |
| TCTATATTTGCAGGGTAAAA+AGG | - | chr1_4:24133880-24133899 | Msa0157190:intron | 30.0% | |
| TGCTCTATTAATGGAATTTC+AGG | - | chr1_4:24134038-24134057 | Msa0157190:intron | 30.0% | |
| !!! | ATATATTTTTGGTGTGCTGT+TGG | - | chr1_4:24134252-24134271 | Msa0157190:CDS | 30.0% |
| ! | AAGTGATTGTCATTTCAACT+AGG | + | chr1_4:24134301-24134320 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTTCTTGCTGAA+CGG | + | chr1_4:24134363-24134382 | None:intergenic | 30.0% |
| TTTGTCAAATATTCACAAGC+AGG | + | chr1_4:24134468-24134487 | None:intergenic | 30.0% | |
| AACCACAAATAGAAACTTTC+CGG | - | chr1_4:24134588-24134607 | Msa0157190:CDS | 30.0% | |
| AATTGTGCCTGTTAATGAAT+TGG | - | chr1_4:24134848-24134867 | Msa0157190:exon | 30.0% | |
| AACTCAACCAATTCATTAAC+AGG | + | chr1_4:24134858-24134877 | None:intergenic | 30.0% | |
| TTGATTGATGTTTGTGTGTG+TGG | + | chr1_4:24125470-24125489 | None:intergenic | 35.0% | |
| CACACACAAACATCAATCAA+TGG | - | chr1_4:24125470-24125489 | Msa0157190:three_prime_UTR | 35.0% | |
| !! | TGAGAAAGAAGAAAGTACCT+TGG | + | chr1_4:24125532-24125551 | None:intergenic | 35.0% |
| !! | ACTGGATCAGTTTGTTTTCT+TGG | - | chr1_4:24125844-24125863 | Msa0157190:intron | 35.0% |
| ! | TGTTTTCTTGGATTCCCTTT+TGG | - | chr1_4:24125856-24125875 | Msa0157190:intron | 35.0% |
| GACTATGACTGAGAAGATAA+TGG | - | chr1_4:24125965-24125984 | Msa0157190:intron | 35.0% | |
| TTACACCTGGGGATAATATT+TGG | - | chr1_4:24126012-24126031 | Msa0157190:intron | 35.0% | |
| TACACCTGGGGATAATATTT+GGG | - | chr1_4:24126013-24126032 | Msa0157190:intron | 35.0% | |
| ! | TTGATGACTCATGATGTTTG+TGG | - | chr1_4:24126050-24126069 | Msa0157190:intron | 35.0% |
| !! | GGGATTTTTAAGAAGGAGTT+TGG | - | chr1_4:24126086-24126105 | Msa0157190:intron | 35.0% |
| !! | TTTTAAGAAGGAGTTTGGTC+AGG | - | chr1_4:24126091-24126110 | Msa0157190:intron | 35.0% |
| ! | GTTGTGGTTGGTTAATGTTA+TGG | - | chr1_4:24126165-24126184 | Msa0157190:intron | 35.0% |
| ! | TGGAATTGTACAGATTGGTT+AGG | - | chr1_4:24126201-24126220 | Msa0157190:intron | 35.0% |
| TTGTCAAATAGCGGCTATAA+CGG | + | chr1_4:24126409-24126428 | None:intergenic | 35.0% | |
| ! | AATTGCTATTGTTCTGCGAT+AGG | + | chr1_4:24126449-24126468 | None:intergenic | 35.0% |
| TGTTGTTCCTTTGTAGGTTT+GGG | - | chr1_4:24126719-24126738 | Msa0157190:intron | 35.0% | |
| CTTGTGAATATATAGTGGTC+AGG | + | chr1_4:24126768-24126787 | None:intergenic | 35.0% | |
| CATCGCTTGTGAATATATAG+TGG | + | chr1_4:24126773-24126792 | None:intergenic | 35.0% | |
| AGTACTTGATATCTTGCTCA+TGG | + | chr1_4:24126836-24126855 | None:intergenic | 35.0% | |
| !! | TGGTAATGGAATGTTAATGC+AGG | - | chr1_4:24126967-24126986 | Msa0157190:intron | 35.0% |
| CAGGTAAATCCAGATTACAA+AGG | - | chr1_4:24126986-24127005 | Msa0157190:intron | 35.0% | |
| CATTTGGTCAATTTGCAACA+GGG | - | chr1_4:24127190-24127209 | Msa0157190:intron | 35.0% | |
| TTTACTTTCTCAGCATAACC+TGG | - | chr1_4:24127355-24127374 | Msa0157190:intron | 35.0% | |
| !! | TAGGTTATACTTTTCAAGCC+AGG | + | chr1_4:24127376-24127395 | None:intergenic | 35.0% |
| TGATGGAAAAGGAACAATAG+TGG | + | chr1_4:24127480-24127499 | None:intergenic | 35.0% | |
| AAAACCTTCCTAGTTGCAAA+GGG | + | chr1_4:24127794-24127813 | None:intergenic | 35.0% | |
| !! | ATTGCTGTTTAAGGGTAAAG+CGG | + | chr1_4:24128140-24128159 | None:intergenic | 35.0% |
| ! | ACAGCAATTGTGTTGTTATG+TGG | - | chr1_4:24128152-24128171 | Msa0157190:intron | 35.0% |
| TACTTGCAGAATCAAATCCT+TGG | + | chr1_4:24128900-24128919 | None:intergenic | 35.0% | |
| TGGTGCAACTTACAAATCAA+TGG | - | chr1_4:24129029-24129048 | Msa0157190:intron | 35.0% | |
| AAACGTTGAGAGTTGCATTA+CGG | + | chr1_4:24129119-24129138 | None:intergenic | 35.0% | |
| GTTCTTCCATCTATCCAAAA+GGG | + | chr1_4:24129187-24129206 | None:intergenic | 35.0% | |
| ! | CTTTTGGATAGATGGAAGAA+CGG | - | chr1_4:24129186-24129205 | Msa0157190:intron | 35.0% |
| AAACCCCCTACATTAAAGTA+GGG | - | chr1_4:24129641-24129660 | Msa0157190:intron | 35.0% | |
| TCTACCCTACTTTAATGTAG+GGG | + | chr1_4:24129648-24129667 | None:intergenic | 35.0% | |
| CTCTACCCTACTTTAATGTA+GGG | + | chr1_4:24129649-24129668 | None:intergenic | 35.0% | |
| ATTAAAGTAGGGTAGAGCAT+CGG | - | chr1_4:24129652-24129671 | Msa0157190:intron | 35.0% | |
| TCAATGTTTAACACTGCCAT+TGG | + | chr1_4:24129753-24129772 | None:intergenic | 35.0% | |
| ACGTTTCTCTTATATGGGAT+GGG | - | chr1_4:24129772-24129791 | Msa0157190:intron | 35.0% | |
| !! | GGATGGGAGATATATTTTGA+TGG | - | chr1_4:24129788-24129807 | Msa0157190:intron | 35.0% |
| !!! | TGGGAGATATATTTTGATGG+TGG | - | chr1_4:24129791-24129810 | Msa0157190:intron | 35.0% |
| !!! | ATATTTTGATGGTGGCAACT+TGG | - | chr1_4:24129799-24129818 | Msa0157190:intron | 35.0% |
| ! | ATTTATGCCATGTGCTTTTG+TGG | - | chr1_4:24129982-24130001 | Msa0157190:intron | 35.0% |
| ! | TTTATGCCATGTGCTTTTGT+GGG | - | chr1_4:24129983-24130002 | Msa0157190:intron | 35.0% |
| !! | AATGACGGGTATGAAACTAT+AGG | - | chr1_4:24130010-24130029 | Msa0157190:intron | 35.0% |
| ! | TTCAAGTTTCAGTCTTGCAT+GGG | + | chr1_4:24130189-24130208 | None:intergenic | 35.0% |
| AGAGAAATAACATGACTGGT+CGG | + | chr1_4:24130237-24130256 | None:intergenic | 35.0% | |
| GGGACTCGAATAGTTTATAA+AGG | + | chr1_4:24130422-24130441 | None:intergenic | 35.0% | |
| GACGCAATCAAATTATTGAG+AGG | - | chr1_4:24130752-24130771 | Msa0157190:intron | 35.0% | |
| !! | ATATTTTTGCAGGTAGCACA+TGG | + | chr1_4:24130816-24130835 | None:intergenic | 35.0% |
| AGAGCAGAGATATCTCTAAT+TGG | - | chr1_4:24130874-24130893 | Msa0157190:intron | 35.0% | |
| TGAAATCCTCATTCTTTCCA+CGG | - | chr1_4:24131001-24131020 | Msa0157190:intron | 35.0% | |
| CAAAGAAGAAAATAGCCGAA+GGG | + | chr1_4:24131108-24131127 | None:intergenic | 35.0% | |
| ACAAAGAAGAAAATAGCCGA+AGG | + | chr1_4:24131109-24131128 | None:intergenic | 35.0% | |
| ! | CTTTGTTTGATGCTCATATC+TGG | - | chr1_4:24131123-24131142 | Msa0157190:CDS | 35.0% |
| CGTCCATTATTATCTTCAGT+TGG | - | chr1_4:24131159-24131178 | Msa0157190:intron | 35.0% | |
| GCTATTTAATGACAATGGGT+TGG | + | chr1_4:24131380-24131399 | None:intergenic | 35.0% | |
| TCATTAAATAGCTGCTACAC+CGG | - | chr1_4:24131388-24131407 | Msa0157190:intron | 35.0% | |
| TTGTCAAATAGTGACTATGG+TGG | - | chr1_4:24131476-24131495 | Msa0157190:intron | 35.0% | |
| GTATAACATGCTGTTGGTAT+AGG | + | chr1_4:24131600-24131619 | None:intergenic | 35.0% | |
| !! | CACTAGTTTGTTGCTTTGAA+CGG | + | chr1_4:24131685-24131704 | None:intergenic | 35.0% |
| !! | TTCCAAATTTATTGGCTCTC+TGG | - | chr1_4:24131815-24131834 | Msa0157190:intron | 35.0% |
| !!! | ATGCTGGTTTTTTACTTTGC+TGG | - | chr1_4:24131889-24131908 | Msa0157190:intron | 35.0% |
| GAAAATATAACTCAGCGAGA+CGG | + | chr1_4:24131956-24131975 | None:intergenic | 35.0% | |
| ! | GCTGAGTTATATTTTCAGCT+AGG | - | chr1_4:24131960-24131979 | Msa0157190:intron | 35.0% |
| TTAATCTTGCCTGCTGAATA+TGG | - | chr1_4:24132531-24132550 | Msa0157190:intron | 35.0% | |
| AAAGGGAAAGCAACATTCAA+GGG | + | chr1_4:24132604-24132623 | None:intergenic | 35.0% | |
| AAAAGGGAAAGCAACATTCA+AGG | + | chr1_4:24132605-24132624 | None:intergenic | 35.0% | |
| CATGAACGCAATATGCAAAA+GGG | + | chr1_4:24132621-24132640 | None:intergenic | 35.0% | |
| ACATGAACGCAATATGCAAA+AGG | + | chr1_4:24132622-24132641 | None:intergenic | 35.0% | |
| CCCCTTTATATTCAGTGTTT+AGG | - | chr1_4:24132768-24132787 | Msa0157190:intron | 35.0% | |
| ATCATTGTAAGAAGACCCTA+TGG | - | chr1_4:24132916-24132935 | Msa0157190:intron | 35.0% | |
| TCATTGTAAGAAGACCCTAT+GGG | - | chr1_4:24132917-24132936 | Msa0157190:intron | 35.0% | |
| ATCTTAAAAAGGGGGCTTTA+TGG | - | chr1_4:24132992-24133011 | Msa0157190:intron | 35.0% | |
| GTATACATAGGATCTTGTAC+GGG | - | chr1_4:24133485-24133504 | Msa0157190:CDS | 35.0% | |
| ATATGATGCATACTGATGCT+AGG | + | chr1_4:24133550-24133569 | None:intergenic | 35.0% | |
| TCCACCATATAAACACATTG+GGG | + | chr1_4:24133723-24133742 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTTGGTGCTGTTGA+TGG | + | chr1_4:24133760-24133779 | None:intergenic | 35.0% |
| ACAGCACCAAAAAAAGATGT+TGG | - | chr1_4:24133763-24133782 | Msa0157190:intron | 35.0% | |
| !!! | CCAACTCCAACATCTTTTTT+TGG | + | chr1_4:24133772-24133791 | None:intergenic | 35.0% |
| CCAAAAAAAGATGTTGGAGT+TGG | - | chr1_4:24133769-24133788 | Msa0157190:intron | 35.0% | |
| !!! | GGATTTTTTGTGCAAATGTC+TGG | - | chr1_4:24133816-24133835 | Msa0157190:intron | 35.0% |
| !! | AATGGAATTTCAGGTTTGGA+TGG | - | chr1_4:24134047-24134066 | Msa0157190:intron | 35.0% |
| TCACAGATATTTGAAGAAGC+TGG | - | chr1_4:24134114-24134133 | Msa0157190:intron | 35.0% | |
| ! | GATTGTCATTTCAACTAGGT+TGG | + | chr1_4:24134297-24134316 | None:intergenic | 35.0% |
| ACCACAAATAGAAACTTTCC+GGG | - | chr1_4:24134589-24134608 | Msa0157190:CDS | 35.0% | |
| CAGGGAAGGTGAAATATATT+TGG | - | chr1_4:24134624-24134643 | Msa0157190:intron | 35.0% | |
| TCTTGGATCAGTAACATAAC+CGG | + | chr1_4:24134683-24134702 | None:intergenic | 35.0% | |
| CTATTGGTATTTCTTTCCAG+TGG | - | chr1_4:24134822-24134841 | Msa0157190:CDS | 35.0% | |
| ATTGATGTTTGTGTGTGTGG+CGG | + | chr1_4:24125467-24125486 | None:intergenic | 40.0% | |
| !! | AAGAAGAAAGTACCTTGGTG+TGG | + | chr1_4:24125527-24125546 | None:intergenic | 40.0% |
| CAAACTGATCCAGTTGAAGA+AGG | + | chr1_4:24125838-24125857 | None:intergenic | 40.0% | |
| TCAACCCAAATATTATCCCC+AGG | + | chr1_4:24126020-24126039 | None:intergenic | 40.0% | |
| ATCTGCAAAGCAGTGCTATA+GGG | - | chr1_4:24126383-24126402 | Msa0157190:intron | 40.0% | |
| GTTGCGTACAATACACCAAA+TGG | - | chr1_4:24126487-24126506 | Msa0157190:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1_4:24126491-24126510 | Msa0157190:intron | 40.0% | |
| ATGGTTATAAAAGGGCAACC+CGG | + | chr1_4:24126557-24126576 | None:intergenic | 40.0% | |
| ! | TGACTGTGTTGTTCCTTTGT+AGG | - | chr1_4:24126713-24126732 | Msa0157190:intron | 40.0% |
| ! | GTGTTGTTCCTTTGTAGGTT+TGG | - | chr1_4:24126718-24126737 | Msa0157190:intron | 40.0% |
| TGGCAAACACCTTTGTAATC+TGG | + | chr1_4:24126998-24127017 | None:intergenic | 40.0% | |
| TAAACTAATCGAACCTCTCC+TGG | + | chr1_4:24127052-24127071 | None:intergenic | 40.0% | |
| GCTAATTAGGTTCTTTCTGC+AGG | - | chr1_4:24127128-24127147 | Msa0157190:intron | 40.0% | |
| TTCTTTCTGCAGGTTCTCTT+GGG | - | chr1_4:24127138-24127157 | Msa0157190:intron | 40.0% | |
| GCATTTGGTCAATTTGCAAC+AGG | - | chr1_4:24127189-24127208 | Msa0157190:intron | 40.0% | |
| GAGAAAGTAAAGTACAGCAG+TGG | + | chr1_4:24127346-24127365 | None:intergenic | 40.0% | |
| ! | TTTTATGGCTGAAAGCTGCA+AGG | + | chr1_4:24127547-24127566 | None:intergenic | 40.0% |
| TCATAACATCCAACTGACAC+AGG | - | chr1_4:24127669-24127688 | Msa0157190:intron | 40.0% | |
| CATAACATCCAACTGACACA+GGG | - | chr1_4:24127670-24127689 | Msa0157190:intron | 40.0% | |
| ATAACATCCAACTGACACAG+GGG | - | chr1_4:24127671-24127690 | Msa0157190:intron | 40.0% | |
| !!! | CTTTTTGTGAGAGGTATCCA+AGG | - | chr1_4:24127694-24127713 | Msa0157190:intron | 40.0% |
| TATGCTTACCCTTTGCAACT+AGG | - | chr1_4:24127783-24127802 | Msa0157190:intron | 40.0% | |
| GAAAACCTTCCTAGTTGCAA+AGG | + | chr1_4:24127795-24127814 | None:intergenic | 40.0% | |
| TGTCTACAACCAATAGTCGT+TGG | - | chr1_4:24127860-24127879 | Msa0157190:intron | 40.0% | |
| ACCAATAGTCGTTGGACTAT+TGG | - | chr1_4:24127868-24127887 | Msa0157190:intron | 40.0% | |
| ACCAATAGTCCAACGACTAT+TGG | + | chr1_4:24127872-24127891 | None:intergenic | 40.0% | |
| TGACTTGAATAACTCCCCAT+TGG | - | chr1_4:24128088-24128107 | Msa0157190:intron | 40.0% | |
| AGATGAGATCACACTCCAAT+GGG | + | chr1_4:24128106-24128125 | None:intergenic | 40.0% | |
| !! | TTGCTGTTTAAGGGTAAAGC+GGG | + | chr1_4:24128139-24128158 | None:intergenic | 40.0% |
| TACAAGGTCGCAATTTCGTA+GGG | + | chr1_4:24128275-24128294 | None:intergenic | 40.0% | |
| TTACAAGGTCGCAATTTCGT+AGG | + | chr1_4:24128276-24128295 | None:intergenic | 40.0% | |
| TCCTTGGCAAGCAAATAACT+TGG | + | chr1_4:24128884-24128903 | None:intergenic | 40.0% | |
| ATTGGTGAAATAAGTGTGGC+TGG | - | chr1_4:24129009-24129028 | Msa0157190:intron | 40.0% | |
| ! | ACTTGTCCCTTTTGGATAGA+TGG | - | chr1_4:24129178-24129197 | Msa0157190:intron | 40.0% |
| CGTTCTTCCATCTATCCAAA+AGG | + | chr1_4:24129188-24129207 | None:intergenic | 40.0% | |
| AATGGACAGAAACAGAACTG+TGG | - | chr1_4:24129476-24129495 | Msa0157190:intron | 40.0% | |
| TGTGGACTTTGTTCTGTGTT+TGG | - | chr1_4:24129494-24129513 | Msa0157190:intron | 40.0% | |
| !! | ACATGTTGGTTCCATCAAGA+AGG | - | chr1_4:24129560-24129579 | Msa0157190:intron | 40.0% |
| !! | CATGTTGGTTCCATCAAGAA+GGG | - | chr1_4:24129561-24129580 | Msa0157190:intron | 40.0% |
| GGTTTGGCATGAAGACAAAA+CGG | + | chr1_4:24129626-24129645 | None:intergenic | 40.0% | |
| CTACTTTAATGTAGGGGGTT+TGG | + | chr1_4:24129642-24129661 | None:intergenic | 40.0% | |
| CAAACCCCCTACATTAAAGT+AGG | - | chr1_4:24129640-24129659 | Msa0157190:intron | 40.0% | |
| CTACCCTACTTTAATGTAGG+GGG | + | chr1_4:24129647-24129666 | None:intergenic | 40.0% | |
| GCTCTACCCTACTTTAATGT+AGG | + | chr1_4:24129650-24129669 | None:intergenic | 40.0% | |
| ! | TTAAAGTAGGGTAGAGCATC+GGG | - | chr1_4:24129653-24129672 | Msa0157190:intron | 40.0% |
| AGTGCAGAGTTTCACAGTAT+GGG | - | chr1_4:24129727-24129746 | Msa0157190:intron | 40.0% | |
| GACGTTTCTCTTATATGGGA+TGG | - | chr1_4:24129771-24129790 | Msa0157190:intron | 40.0% | |
| AGTCTTGCATGGGTACTAAT+GGG | + | chr1_4:24130179-24130198 | None:intergenic | 40.0% | |
| ! | GTTCAAGTTTCAGTCTTGCA+TGG | + | chr1_4:24130190-24130209 | None:intergenic | 40.0% |
| ! | GAGAAATAACATGACTGGTC+GGG | + | chr1_4:24130236-24130255 | None:intergenic | 40.0% |
| GGTGGATGGATATAAATGGT+GGG | + | chr1_4:24130579-24130598 | None:intergenic | 40.0% | |
| ! | TGGTGGATGGATATAAATGG+TGG | + | chr1_4:24130580-24130599 | None:intergenic | 40.0% |
| ! | GCTTGGTGGATGGATATAAA+TGG | + | chr1_4:24130583-24130602 | None:intergenic | 40.0% |
| AGTCATCTCTCATGCAATGT+GGG | + | chr1_4:24130643-24130662 | None:intergenic | 40.0% | |
| AAGTCATCTCTCATGCAATG+TGG | + | chr1_4:24130644-24130663 | None:intergenic | 40.0% | |
| CAAAACAGGTTTGTGAGATG+AGG | + | chr1_4:24130694-24130713 | None:intergenic | 40.0% | |
| ! | TAAAGTGGTGGTGCAATTTC+AGG | + | chr1_4:24130779-24130798 | None:intergenic | 40.0% |
| TTAGAGATATCTCTGCTCTC+TGG | + | chr1_4:24130873-24130892 | None:intergenic | 40.0% | |
| CACCCTAGATAAATAGGATG+TGG | + | chr1_4:24130969-24130988 | None:intergenic | 40.0% | |
| ! | TCCTATTTATCTAGGGTGTG+TGG | - | chr1_4:24130971-24130990 | Msa0157190:intron | 40.0% |
| ! | CCTATTTATCTAGGGTGTGT+GGG | - | chr1_4:24130972-24130991 | Msa0157190:intron | 40.0% |
| TACACCTCAACATGTCTGTT+AGG | - | chr1_4:24131081-24131100 | Msa0157190:CDS | 40.0% | |
| GTTTGATGCTCATATCTGGT+AGG | - | chr1_4:24131127-24131146 | Msa0157190:CDS | 40.0% | |
| !! | TTTGTGCCTTTGGGATTTGT+TGG | - | chr1_4:24131224-24131243 | Msa0157190:intron | 40.0% |
| !! | TTGTGCCTTTGGGATTTGTT+GGG | - | chr1_4:24131225-24131244 | Msa0157190:intron | 40.0% |
| !! | TGGATTAGTGTTGTTGATCG+CGG | + | chr1_4:24131555-24131574 | None:intergenic | 40.0% |
| CGTTCAAAGCAACAAACTAG+TGG | - | chr1_4:24131683-24131702 | Msa0157190:intron | 40.0% | |
| ATGAGAAGAGAAGTCACTAC+TGG | + | chr1_4:24131766-24131785 | None:intergenic | 40.0% | |
| !!! | TGCTTGTTTTGGAGAAATGC+TGG | - | chr1_4:24131873-24131892 | Msa0157190:intron | 40.0% |
| TGGATTGCTTGCCTAGAATT+TGG | - | chr1_4:24131909-24131928 | Msa0157190:intron | 40.0% | |
| CAAATCAAGCCAATCCAAAC+AGG | - | chr1_4:24132363-24132382 | Msa0157190:intron | 40.0% | |
| AGTTGATCACTATGCCATTG+AGG | + | chr1_4:24132394-24132413 | None:intergenic | 40.0% | |
| TATGAGATGCCATATTCAGC+AGG | + | chr1_4:24132543-24132562 | None:intergenic | 40.0% | |
| TATTGCGTTCATGTCCTACT+CGG | - | chr1_4:24132628-24132647 | Msa0157190:intron | 40.0% | |
| TATATAGTGACCAGCAAGCA+AGG | - | chr1_4:24132714-24132733 | Msa0157190:intron | 40.0% | |
| TAAATTTGATGAGCAAGCGG+TGG | - | chr1_4:24132847-24132866 | Msa0157190:intron | 40.0% | |
| TGCAATCAAAGGACTAACCT+TGG | + | chr1_4:24133326-24133345 | None:intergenic | 40.0% | |
| !! | GTATTTTCAATTGGTGGCCA+TGG | - | chr1_4:24133611-24133630 | Msa0157190:intron | 40.0% |
| TATAAACACATTGGGGCCTA+TGG | + | chr1_4:24133716-24133735 | None:intergenic | 40.0% | |
| TAGGCCCCAATGTGTTTATA+TGG | - | chr1_4:24133716-24133735 | Msa0157190:intron | 40.0% | |
| ATGCGGGCATAAGTATCTTT+CGG | + | chr1_4:24134186-24134205 | None:intergenic | 40.0% | |
| AAGATGCTAGGAAAGAAGCA+GGG | + | chr1_4:24134229-24134248 | None:intergenic | 40.0% | |
| AAAGATGCTAGGAAAGAAGC+AGG | + | chr1_4:24134230-24134249 | None:intergenic | 40.0% | |
| !!! | TGTTGGCTTTTTTGTGGTTG+TGG | - | chr1_4:24134269-24134288 | Msa0157190:CDS | 40.0% |
| CTTGCTGAACGGTTCAATAA+GGG | + | chr1_4:24134352-24134371 | None:intergenic | 40.0% | |
| TCTTGCTGAACGGTTCAATA+AGG | + | chr1_4:24134353-24134372 | None:intergenic | 40.0% | |
| TACTTCCATTGCTGATGTGT+TGG | - | chr1_4:24134546-24134565 | Msa0157190:CDS | 40.0% | |
| AACAACCAACACATCAGCAA+TGG | + | chr1_4:24134554-24134573 | None:intergenic | 40.0% | |
| CCACAAATAGAAACTTTCCG+GGG | - | chr1_4:24134590-24134609 | Msa0157190:CDS | 40.0% | |
| ! | AAGTACCTTGGTGTGGAAGA+AGG | + | chr1_4:24125520-24125539 | None:intergenic | 45.0% |
| ! | AATGGCGAAAGCTTCTGAGA+AGG | - | chr1_4:24125983-24126002 | Msa0157190:intron | 45.0% |
| ! | ATGGCGAAAGCTTCTGAGAA+GGG | - | chr1_4:24125984-24126003 | Msa0157190:intron | 45.0% |
| !! | TTTGTGGCCCTGGTTCTATT+GGG | - | chr1_4:24126066-24126085 | Msa0157190:intron | 45.0% |
| CATCTGCAAAGCAGTGCTAT+AGG | - | chr1_4:24126382-24126401 | Msa0157190:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1_4:24126490-24126509 | Msa0157190:intron | 45.0% | |
| TCACGATCCCAAACCTACAA+AGG | + | chr1_4:24126729-24126748 | None:intergenic | 45.0% | |
| ! | GTAGGTTTGGGATCGTGAAA+AGG | - | chr1_4:24126731-24126750 | Msa0157190:intron | 45.0% |
| GTTCTTTCTGCAGGTTCTCT+TGG | - | chr1_4:24127137-24127156 | Msa0157190:intron | 45.0% | |
| GATTCTCACACTTGTACTGC+TGG | - | chr1_4:24127165-24127184 | Msa0157190:intron | 45.0% | |
| ! | ACTTGTACTGCTGGAGCATT+TGG | - | chr1_4:24127174-24127193 | Msa0157190:intron | 45.0% |
| GGTCAATTTGCAACAGGGAT+TGG | - | chr1_4:24127195-24127214 | Msa0157190:intron | 45.0% | |
| ! | GGGATTGGTAATACTGATGC+CGG | - | chr1_4:24127210-24127229 | Msa0157190:intron | 45.0% |
| !!! | TACTGATGCCGGTTTTGTGT+TGG | - | chr1_4:24127221-24127240 | Msa0157190:intron | 45.0% |
| !!! | ACTGATGCCGGTTTTGTGTT+GGG | - | chr1_4:24127222-24127241 | Msa0157190:intron | 45.0% |
| ACCTAGCTTCTTGTGAACAC+CGG | - | chr1_4:24127391-24127410 | Msa0157190:intron | 45.0% | |
| CTTACCCTTTGCAACTAGGA+AGG | - | chr1_4:24127787-24127806 | Msa0157190:intron | 45.0% | |
| ! | TCGTTGGACTATTGGTCTAG+TGG | - | chr1_4:24127876-24127895 | Msa0157190:intron | 45.0% |
| GATGAGATCACACTCCAATG+GGG | + | chr1_4:24128105-24128124 | None:intergenic | 45.0% | |
| CAGATGAGATCACACTCCAA+TGG | + | chr1_4:24128107-24128126 | None:intergenic | 45.0% | |
| !! | TGGAGGCACCTGCATTAATA+TGG | + | chr1_4:24128831-24128850 | None:intergenic | 45.0% |
| GCCAAGTTATTTGCTTGCCA+AGG | - | chr1_4:24128880-24128899 | Msa0157190:intron | 45.0% | |
| GATTCTGCAAGTAAGTGTCC+TGG | - | chr1_4:24128907-24128926 | Msa0157190:intron | 45.0% | |
| ACGGATGACATTGTGCAACA+TGG | - | chr1_4:24129205-24129224 | Msa0157190:intron | 45.0% | |
| TGCAACATGGTTGTTGAAGC+TGG | - | chr1_4:24129218-24129237 | Msa0157190:intron | 45.0% | |
| AACATGGTTGTTGAAGCTGG+AGG | - | chr1_4:24129221-24129240 | Msa0157190:intron | 45.0% | |
| GTTGAAGCTGGAGGAAAGAA+TGG | - | chr1_4:24129230-24129249 | Msa0157190:intron | 45.0% | |
| CAGCGTTCCGTAGATAGTAA+TGG | - | chr1_4:24129458-24129477 | Msa0157190:intron | 45.0% | |
| GGTAGGAAAGTGGTACATGT+TGG | - | chr1_4:24129546-24129565 | Msa0157190:intron | 45.0% | |
| ! | TTTGGTTCCACCCTTCTTGA+TGG | + | chr1_4:24129574-24129593 | None:intergenic | 45.0% |
| ! | CTGATTTGTGACGCTCTCTT+TGG | + | chr1_4:24129592-24129611 | None:intergenic | 45.0% |
| !! | CAAAGAGAGCGTCACAAATC+AGG | - | chr1_4:24129590-24129609 | Msa0157190:intron | 45.0% |
| GGCATGAAGACAAAACGGAA+AGG | + | chr1_4:24129621-24129640 | None:intergenic | 45.0% | |
| !! | AAACTCTGCACTGACTGCAA+AGG | + | chr1_4:24129719-24129738 | None:intergenic | 45.0% |
| CAGTGCAGAGTTTCACAGTA+TGG | - | chr1_4:24129726-24129745 | Msa0157190:intron | 45.0% | |
| AGTTTCACAGTATGGGCCAA+TGG | - | chr1_4:24129734-24129753 | Msa0157190:intron | 45.0% | |
| !! | GGCAACTTGGAGTTTTATCG+CGG | - | chr1_4:24129812-24129831 | Msa0157190:intron | 45.0% |
| ! | TTGAGACCCACAAAAGCACA+TGG | + | chr1_4:24129992-24130011 | None:intergenic | 45.0% |
| ! | GCTTTTGTGGGTCTCAATGA+CGG | - | chr1_4:24129995-24130014 | Msa0157190:intron | 45.0% |
| ! | CTTTTGTGGGTCTCAATGAC+GGG | - | chr1_4:24129996-24130015 | Msa0157190:intron | 45.0% |
| CAGTCTTGCATGGGTACTAA+TGG | + | chr1_4:24130180-24130199 | None:intergenic | 45.0% | |
| TTTCTCTATCAGGTTTCGGG+CGG | - | chr1_4:24130250-24130269 | Msa0157190:intron | 45.0% | |
| AGGTAAGGAGTGAATGGAGT+CGG | + | chr1_4:24130402-24130421 | None:intergenic | 45.0% | |
| TGCCATCTCTCATGCAATGT+GGG | + | chr1_4:24130442-24130461 | None:intergenic | 45.0% | |
| ATGCCATCTCTCATGCAATG+TGG | + | chr1_4:24130443-24130462 | None:intergenic | 45.0% | |
| GCAATCTTCATCTCACAAGC+CGG | - | chr1_4:24130484-24130503 | Msa0157190:intron | 45.0% | |
| CAATCTTCATCTCACAAGCC+GGG | - | chr1_4:24130485-24130504 | Msa0157190:intron | 45.0% | |
| ! | TCTCACAAACCTGTTTTGCG+AGG | - | chr1_4:24130696-24130715 | Msa0157190:intron | 45.0% |
| ACTACACAACCTCGCAAAAC+AGG | + | chr1_4:24130708-24130727 | None:intergenic | 45.0% | |
| GCATGTTGAAGCTAAAGTGG+TGG | + | chr1_4:24130791-24130810 | None:intergenic | 45.0% | |
| GTGGCATGTTGAAGCTAAAG+TGG | + | chr1_4:24130794-24130813 | None:intergenic | 45.0% | |
| ! | TTTTTGCAGGTAGCACATGG+TGG | + | chr1_4:24130813-24130832 | None:intergenic | 45.0% |
| CTCAAGAAACTGAGGGCAAA+TGG | + | chr1_4:24130911-24130930 | None:intergenic | 45.0% | |
| ATGGTCGCTCAAGAAACTGA+GGG | + | chr1_4:24130918-24130937 | None:intergenic | 45.0% | |
| AATGGTCGCTCAAGAAACTG+AGG | + | chr1_4:24130919-24130938 | None:intergenic | 45.0% | |
| CCCACACACCCTAGATAAAT+AGG | + | chr1_4:24130975-24130994 | None:intergenic | 45.0% | |
| TTGTGACCGTGGAAAGAATG+AGG | + | chr1_4:24131010-24131029 | None:intergenic | 45.0% | |
| AACGCAAACAATTGTGACCG+TGG | + | chr1_4:24131021-24131040 | None:intergenic | 45.0% | |
| CATGTTGAGGTGTAGAACAG+TGG | + | chr1_4:24131075-24131094 | None:intergenic | 45.0% | |
| ACATGTCTGTTAGGTCCCTT+CGG | - | chr1_4:24131090-24131109 | Msa0157190:CDS | 45.0% | |
| CTGATTCTTGACACTCCTGT+TGG | - | chr1_4:24131188-24131207 | Msa0157190:intron | 45.0% | |
| AAACGCCCAACAAATCCCAA+AGG | + | chr1_4:24131233-24131252 | None:intergenic | 45.0% | |
| !! | GGATTTGTTGGGCGTTTCTT+TGG | - | chr1_4:24131236-24131255 | Msa0157190:intron | 45.0% |
| GGTTGGATGTTAGTTGTCTG+GGG | + | chr1_4:24131363-24131382 | None:intergenic | 45.0% | |
| GGGTTGGATGTTAGTTGTCT+GGG | + | chr1_4:24131364-24131383 | None:intergenic | 45.0% | |
| ! | TGGGTTGGATGTTAGTTGTC+TGG | + | chr1_4:24131365-24131384 | None:intergenic | 45.0% |
| GAGCGTGTATAACATGCTGT+TGG | + | chr1_4:24131606-24131625 | None:intergenic | 45.0% | |
| TCACCCATTGAGAAAACCAG+AGG | - | chr1_4:24131651-24131670 | Msa0157190:intron | 45.0% | |
| !!! | GTGCCTCTGGTTTTCTCAAT+GGG | + | chr1_4:24131657-24131676 | None:intergenic | 45.0% |
| !!! | TGTGCCTCTGGTTTTCTCAA+TGG | + | chr1_4:24131658-24131677 | None:intergenic | 45.0% |
| ! | ACAGCGTTAGTCTGAGGAAA+GGG | + | chr1_4:24131715-24131734 | None:intergenic | 45.0% |
| ! | TACAGCGTTAGTCTGAGGAA+AGG | + | chr1_4:24131716-24131735 | None:intergenic | 45.0% |
| GGCCAGAGAGCCAATAAATT+TGG | + | chr1_4:24131820-24131839 | None:intergenic | 45.0% | |
| TGCTTGCCTAGAATTTGGTC+AGG | - | chr1_4:24131914-24131933 | Msa0157190:intron | 45.0% | |
| CATCAGCCTGACCAAATTCT+AGG | + | chr1_4:24131923-24131942 | None:intergenic | 45.0% | |
| ! | CATTAAAAGCAGTGCCGAGT+AGG | + | chr1_4:24132645-24132664 | None:intergenic | 45.0% |
| ! | GCTTGCTGGTCACTATATAC+TGG | + | chr1_4:24132713-24132732 | None:intergenic | 45.0% |
| TCTTTGTCTACCTTGCTTGC+TGG | + | chr1_4:24132727-24132746 | None:intergenic | 45.0% | |
| TGTCTCAAAATTGGAGCCAC+TGG | - | chr1_4:24133297-24133316 | Msa0157190:CDS | 45.0% | |
| GATGTTGTTACTGTCTGACG+CGG | - | chr1_4:24133360-24133379 | Msa0157190:intron | 45.0% | |
| AATGTTGCAGCCTCATTCAC+CGG | - | chr1_4:24133415-24133434 | Msa0157190:intron | 45.0% | |
| TACATAGGATCTTGTACGGG+TGG | - | chr1_4:24133488-24133507 | Msa0157190:CDS | 45.0% | |
| ATCCCTTCACAAGTTGCCTA+TGG | + | chr1_4:24133679-24133698 | None:intergenic | 45.0% | |
| TTGTGAAGGGATGCCTTCTA+TGG | - | chr1_4:24133687-24133706 | Msa0157190:intron | 45.0% | |
| GCCCCAATGTGTTTATATGG+TGG | - | chr1_4:24133719-24133738 | Msa0157190:intron | 45.0% | |
| GTTGCAGGGACAAGAAATGT+GGG | + | chr1_4:24133914-24133933 | None:intergenic | 45.0% | |
| TGTTGCAGGGACAAGAAATG+TGG | + | chr1_4:24133915-24133934 | None:intergenic | 45.0% | |
| AAGTCTTACCACCAGATCCA+GGG | + | chr1_4:24134092-24134111 | None:intergenic | 45.0% | |
| TCCTAGTTGTGGTGCTTGTT+TGG | - | chr1_4:24134155-24134174 | Msa0157190:intron | 45.0% | |
| CCTAGTTGTGGTGCTTGTTT+GGG | - | chr1_4:24134156-24134175 | Msa0157190:intron | 45.0% | |
| TGCGGGCATAAGTATCTTTC+GGG | + | chr1_4:24134185-24134204 | None:intergenic | 45.0% | |
| TTGCCTGAGGTTCATTCATG+CGG | + | chr1_4:24134203-24134222 | None:intergenic | 45.0% | |
| !!! | GTGTGCTGTTGGCTTTTTTG+TGG | - | chr1_4:24134263-24134282 | Msa0157190:CDS | 45.0% |
| GCCGTTCTTAATGTCTCACT+CGG | - | chr1_4:24134428-24134447 | Msa0157190:intron | 45.0% | |
| GCCGAGTGAGACATTAAGAA+CGG | + | chr1_4:24134432-24134451 | None:intergenic | 45.0% | |
| !! | TGCTGATGTGTTGGTTGTTC+AGG | - | chr1_4:24134555-24134574 | Msa0157190:CDS | 45.0% |
| CCCCGGAAAGTTTCTATTTG+TGG | + | chr1_4:24134593-24134612 | None:intergenic | 45.0% | |
| GCTTACTGCAAGAACTCTCT+TGG | + | chr1_4:24134700-24134719 | None:intergenic | 45.0% | |
| AACAGGCACAATTTCTCCAC+TGG | + | chr1_4:24134841-24134860 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTATAGTTT+TGG | - | chr1_4:24125889-24125908 | Msa0157190:intron | 5.0% |
| !! | AATATATAAGATAAATAAAA+AGG | + | chr1_4:24128808-24128827 | None:intergenic | 5.0% |
| !! | TATAATAATAATTGAAATTA+AGG | - | chr1_4:24129918-24129937 | Msa0157190:intron | 5.0% |
| GGAGGTTGAAGGAACAAGAG+AGG | + | chr1_4:24125499-24125518 | None:intergenic | 50.0% | |
| GTGTGGAAGAAGGAGGTTGA+AGG | + | chr1_4:24125510-24125529 | None:intergenic | 50.0% | |
| AACCTCCTTCTTCCACACCA+AGG | - | chr1_4:24125512-24125531 | Msa0157190:three_prime_UTR | 50.0% | |
| ! | TACCTTGGTGTGGAAGAAGG+AGG | + | chr1_4:24125517-24125536 | None:intergenic | 50.0% |
| CAGCGTCAACCTTCTTCAAC+TGG | - | chr1_4:24125826-24125845 | Msa0157190:intron | 50.0% | |
| ! | TGGCGAAAGCTTCTGAGAAG+GGG | - | chr1_4:24125985-24126004 | Msa0157190:intron | 50.0% |
| ! | AGAAGGGGCATGTTACACCT+GGG | - | chr1_4:24126000-24126019 | Msa0157190:intron | 50.0% |
| ACTCATGATGTTTGTGGCCC+TGG | - | chr1_4:24126056-24126075 | Msa0157190:intron | 50.0% | |
| !! | GTTTGTGGCCCTGGTTCTAT+TGG | - | chr1_4:24126065-24126084 | Msa0157190:intron | 50.0% |
| GGAGTTTGGTCAGGATGCTA+AGG | - | chr1_4:24126100-24126119 | Msa0157190:intron | 50.0% | |
| CTAGAGCTCCTGCATATGCA+GGG | + | chr1_4:24126530-24126549 | None:intergenic | 50.0% | |
| ACTAGAGCTCCTGCATATGC+AGG | + | chr1_4:24126531-24126550 | None:intergenic | 50.0% | |
| TTGCTCAGGAAGGTCATTGC+AGG | - | chr1_4:24127026-24127045 | Msa0157190:CDS | 50.0% | |
| ! | TGCGGGGAAGCTTTTGCTTA+AGG | - | chr1_4:24127245-24127264 | Msa0157190:intron | 50.0% |
| ACCGGTGTTCACAAGAAGCT+AGG | + | chr1_4:24127395-24127414 | None:intergenic | 50.0% | |
| CAAAAAGCCCCTGTGTCAGT+TGG | + | chr1_4:24127681-24127700 | None:intergenic | 50.0% | |
| ! | ACACAGGGGCTTTTTGTGAG+AGG | - | chr1_4:24127685-24127704 | Msa0157190:intron | 50.0% |
| AATGCACGCAGAACCCTCTA+AGG | + | chr1_4:24127950-24127969 | None:intergenic | 50.0% | |
| ! | GTTGGTTCCATCAAGAAGGG+TGG | - | chr1_4:24129564-24129583 | Msa0157190:intron | 50.0% |
| TGTCAGTGTTTGGTTGGGCT+TGG | - | chr1_4:24130119-24130138 | Msa0157190:intron | 50.0% | |
| ! | TGGGTACTAATGGGTGGATG+TGG | + | chr1_4:24130170-24130189 | None:intergenic | 50.0% |
| CTTGCATGGGTACTAATGGG+TGG | + | chr1_4:24130176-24130195 | None:intergenic | 50.0% | |
| ! | GTCGGGTTCAAATGGTTTGC+GGG | + | chr1_4:24130219-24130238 | None:intergenic | 50.0% |
| GGTCGGGTTCAAATGGTTTG+CGG | + | chr1_4:24130220-24130239 | None:intergenic | 50.0% | |
| ! | CATGACTGGTCGGGTTCAAA+TGG | + | chr1_4:24130227-24130246 | None:intergenic | 50.0% |
| TTCTCTATCAGGTTTCGGGC+GGG | - | chr1_4:24130251-24130270 | Msa0157190:intron | 50.0% | |
| GTCCCACATTGCATGAGAGA+TGG | - | chr1_4:24130437-24130456 | Msa0157190:intron | 50.0% | |
| TGTTGGGGTGAACACAAACC+CGG | + | chr1_4:24130506-24130525 | None:intergenic | 50.0% | |
| !! | ACACTATTGGGCTTGGTGGA+TGG | + | chr1_4:24130593-24130612 | None:intergenic | 50.0% |
| TCCACCAAGCCCAATAGTGT+TGG | - | chr1_4:24130593-24130612 | Msa0157190:intron | 50.0% | |
| CCACCAAGCCCAATAGTGTT+GGG | - | chr1_4:24130594-24130613 | Msa0157190:intron | 50.0% | |
| ACACCCAACACTATTGGGCT+TGG | + | chr1_4:24130600-24130619 | None:intergenic | 50.0% | |
| CCCTCACACCCAACACTATT+GGG | + | chr1_4:24130605-24130624 | None:intergenic | 50.0% | |
| ! | CCCAATAGTGTTGGGTGTGA+GGG | - | chr1_4:24130602-24130621 | Msa0157190:intron | 50.0% |
| ! | CCAATAGTGTTGGGTGTGAG+GGG | - | chr1_4:24130603-24130622 | Msa0157190:intron | 50.0% |
| ! | CAATAGTGTTGGGTGTGAGG+GGG | - | chr1_4:24130604-24130623 | Msa0157190:intron | 50.0% |
| AGGTGTAGAACAGTGGTGGT+GGG | + | chr1_4:24131068-24131087 | None:intergenic | 50.0% | |
| GTTGAGGTGTAGAACAGTGG+TGG | + | chr1_4:24131072-24131091 | None:intergenic | 50.0% | |
| GGGACCTAACAGACATGTTG+AGG | + | chr1_4:24131088-24131107 | None:intergenic | 50.0% | |
| AATCCACTACGCTATAGCGC+CGG | + | chr1_4:24131410-24131429 | None:intergenic | 50.0% | |
| ! | GTGTTGTTGATCGCGGATTG+TGG | + | chr1_4:24131548-24131567 | None:intergenic | 50.0% |
| ACATATGTGCGTCGTGAGGT+TGG | + | chr1_4:24131575-24131594 | None:intergenic | 50.0% | |
| GGTAACATATGTGCGTCGTG+AGG | + | chr1_4:24131579-24131598 | None:intergenic | 50.0% | |
| TCCTCAGACTAACGCTGTAG+TGG | - | chr1_4:24131717-24131736 | Msa0157190:intron | 50.0% | |
| ! | ACCACTACAGCGTTAGTCTG+AGG | + | chr1_4:24131721-24131740 | None:intergenic | 50.0% |
| GAGGTAGAGCCTGTTTGGAT+TGG | + | chr1_4:24132375-24132394 | None:intergenic | 50.0% | |
| CCATTGAGGTAGAGCCTGTT+TGG | + | chr1_4:24132380-24132399 | None:intergenic | 50.0% | |
| CCAAACAGGCTCTACCTCAA+TGG | - | chr1_4:24132377-24132396 | Msa0157190:intron | 50.0% | |
| TTCACCGGATAACCGTGCTT+TGG | - | chr1_4:24133430-24133449 | Msa0157190:intron | 50.0% | |
| CTTGCCAAAGCACGGTTATC+CGG | + | chr1_4:24133437-24133456 | None:intergenic | 50.0% | |
| TGCACTCTCTTGCCAAAGCA+CGG | + | chr1_4:24133445-24133464 | None:intergenic | 50.0% | |
| ! | TGCTTTGGCAAGAGAGTGCA+AGG | - | chr1_4:24133445-24133464 | Msa0157190:intron | 50.0% |
| !! | GATTTTTCGACCACCGCCAT+AGG | - | chr1_4:24133660-24133679 | Msa0157190:intron | 50.0% |
| CCTTCACAAGTTGCCTATGG+CGG | + | chr1_4:24133676-24133695 | None:intergenic | 50.0% | |
| CGCCATAGGCAACTTGTGAA+GGG | - | chr1_4:24133674-24133693 | Msa0157190:intron | 50.0% | |
| TGAAGGGATGCCTTCTATGG+TGG | - | chr1_4:24133690-24133709 | Msa0157190:intron | 50.0% | |
| ATGCCTTCTATGGTGGCCAT+AGG | - | chr1_4:24133697-24133716 | Msa0157190:intron | 50.0% | |
| !! | TTGGTGCTGTTGATGGCAGA+AGG | + | chr1_4:24133753-24133772 | None:intergenic | 50.0% |
| TCTTGTCCCTGCAACACAGA+AGG | - | chr1_4:24133919-24133938 | Msa0157190:intron | 50.0% | |
| TGCAGACCTTCTGTGTTGCA+GGG | + | chr1_4:24133928-24133947 | None:intergenic | 50.0% | |
| TTGCAGACCTTCTGTGTTGC+AGG | + | chr1_4:24133929-24133948 | None:intergenic | 50.0% | |
| GTGTATAGTCTTCCTGTCCC+TGG | - | chr1_4:24134072-24134091 | Msa0157190:intron | 50.0% | |
| CAAGTCTTACCACCAGATCC+AGG | + | chr1_4:24134093-24134112 | None:intergenic | 50.0% | |
| ACACCTGCTAGTCCTAGTTG+TGG | - | chr1_4:24134144-24134163 | Msa0157190:intron | 50.0% | |
| CCCAAACAAGCACCACAACT+AGG | + | chr1_4:24134159-24134178 | None:intergenic | 50.0% | |
| AGTTGTGGTGCTTGTTTGGG+TGG | - | chr1_4:24134159-24134178 | Msa0157190:intron | 50.0% | |
| TGCCTGAGGTTCATTCATGC+GGG | + | chr1_4:24134202-24134221 | None:intergenic | 50.0% | |
| TAGAAACTTTCCGGGGCGAA+TGG | - | chr1_4:24134597-24134616 | Msa0157190:CDS | 50.0% | |
| AGAAACTTTCCGGGGCGAAT+GGG | - | chr1_4:24134598-24134617 | Msa0157190:intron | 50.0% | |
| GCAGATGCTGCAGCTGTATA+TGG | + | chr1_4:24134655-24134674 | None:intergenic | 50.0% | |
| GGTTGACGCTGTGTCTGTTG+AGG | + | chr1_4:24125817-24125836 | None:intergenic | 55.0% | |
| ! | GAGAAGGGGCATGTTACACC+TGG | - | chr1_4:24125999-24126018 | Msa0157190:intron | 55.0% |
| ! | GAAGGGGCATGTTACACCTG+GGG | - | chr1_4:24126001-24126020 | Msa0157190:intron | 55.0% |
| ! | ATGCAGGAGCTCTAGTGCAC+CGG | - | chr1_4:24126535-24126554 | Msa0157190:intron | 55.0% |
| TTGCCACATCGCTCTTGCTC+AGG | - | chr1_4:24127012-24127031 | Msa0157190:intron | 55.0% | |
| CTTCCTGAGCAAGAGCGATG+TGG | + | chr1_4:24127018-24127037 | None:intergenic | 55.0% | |
| CACATCGCTCTTGCTCAGGA+AGG | - | chr1_4:24127016-24127035 | Msa0157190:CDS | 55.0% | |
| !!! | TGCCGGTTTTGTGTTGGGTG+CGG | - | chr1_4:24127227-24127246 | Msa0157190:intron | 55.0% |
| !! | AAGTAGGGTAGAGCATCGGG+AGG | - | chr1_4:24129656-24129675 | Msa0157190:intron | 55.0% |
| !! | AGTAGGGTAGAGCATCGGGA+GGG | - | chr1_4:24129657-24129676 | Msa0157190:intron | 55.0% |
| !! | GGATCTTGGAGGAGGTGTTG+GGG | + | chr1_4:24130521-24130540 | None:intergenic | 55.0% |
| !! | GGGATCTTGGAGGAGGTGTT+GGG | + | chr1_4:24130522-24130541 | None:intergenic | 55.0% |
| ! | AGGGATCTTGGAGGAGGTGT+TGG | + | chr1_4:24130523-24130542 | None:intergenic | 55.0% |
| ACACCTCCTCCAAGATCCCT+CGG | - | chr1_4:24130523-24130542 | Msa0157190:intron | 55.0% | |
| CCCAACACTATTGGGCTTGG+TGG | + | chr1_4:24130597-24130616 | None:intergenic | 55.0% | |
| ! | GCCCAATAGTGTTGGGTGTG+AGG | - | chr1_4:24130601-24130620 | Msa0157190:intron | 55.0% |
| CCCCTCACACCCAACACTAT+TGG | + | chr1_4:24130606-24130625 | None:intergenic | 55.0% | |
| GTGGGGCTGAACAACAGAGA+TGG | + | chr1_4:24131050-24131069 | None:intergenic | 55.0% | |
| ! | GGTGTAGAACAGTGGTGGTG+GGG | + | chr1_4:24131067-24131086 | None:intergenic | 55.0% |
| GAGGTGTAGAACAGTGGTGG+TGG | + | chr1_4:24131069-24131088 | None:intergenic | 55.0% | |
| TTGAACGGAGCATGTGCCTC+TGG | + | chr1_4:24131670-24131689 | None:intergenic | 55.0% | |
| ! | ATTGGAGCCACTGGTTGCCA+AGG | - | chr1_4:24133306-24133325 | Msa0157190:CDS | 55.0% |
| GGACTAACCTTGGCAACCAG+TGG | + | chr1_4:24133316-24133335 | None:intergenic | 55.0% | |
| GCACGGTTATCCGGTGAATG+AGG | + | chr1_4:24133428-24133447 | None:intergenic | 55.0% | |
| TCACAAGTTGCCTATGGCGG+TGG | + | chr1_4:24133673-24133692 | None:intergenic | 55.0% | |
| CCGCCATAGGCAACTTGTGA+AGG | - | chr1_4:24133673-24133692 | Msa0157190:intron | 55.0% | |
| AGTCTTCCTGTCCCTGGATC+TGG | - | chr1_4:24134078-24134097 | Msa0157190:intron | 55.0% | |
| TTACCACCAGATCCAGGGAC+AGG | + | chr1_4:24134087-24134106 | None:intergenic | 55.0% | |
| ! | GCACCACAACTAGGACTAGC+AGG | + | chr1_4:24134150-24134169 | None:intergenic | 55.0% |
| TGCCCGCATGAATGAACCTC+AGG | - | chr1_4:24134197-24134216 | Msa0157190:intron | 55.0% | |
| AGAAGCAGGGAACTTGCCTG+AGG | + | chr1_4:24134216-24134235 | None:intergenic | 55.0% | |
| ! | GCTGCAGCATCTGCATTGAC+CGG | - | chr1_4:24134661-24134680 | Msa0157190:intron | 55.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1_4:24126503-24126522 | Msa0157190:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr1_4:24126518-24126537 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr1_4:24126519-24126538 | None:intergenic | 60.0% | |
| TGCATATGCAGGGTCCGGGA+AGG | + | chr1_4:24126520-24126539 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+AGG | - | chr1_4:24126519-24126538 | Msa0157190:intron | 60.0% | |
| CTCCTGCATATGCAGGGTCC+GGG | + | chr1_4:24126524-24126543 | None:intergenic | 60.0% | |
| GCTCCTGCATATGCAGGGTC+CGG | + | chr1_4:24126525-24126544 | None:intergenic | 60.0% | |
| ! | TGCAGGAGCTCTAGTGCACC+GGG | - | chr1_4:24126536-24126555 | Msa0157190:intron | 60.0% |
| CAGGAAGGTCATTGCAGGCC+AGG | - | chr1_4:24127031-24127050 | Msa0157190:CDS | 60.0% | |
| AGGTCATTGCAGGCCAGGAG+AGG | - | chr1_4:24127036-24127055 | Msa0157190:CDS | 60.0% | |
| !! | GCCGGTTTTGTGTTGGGTGC+GGG | - | chr1_4:24127228-24127247 | Msa0157190:intron | 60.0% |
| CCCCGCACCCAACACAAAAC+CGG | + | chr1_4:24127232-24127251 | None:intergenic | 60.0% | |
| !! | CCGGTTTTGTGTTGGGTGCG+GGG | - | chr1_4:24127229-24127248 | Msa0157190:intron | 60.0% |
| !! | GGTAGAGCATCGGGAGGGTT+CGG | - | chr1_4:24129662-24129681 | Msa0157190:intron | 60.0% |
| !! | GTAGAGCATCGGGAGGGTTC+GGG | - | chr1_4:24129663-24129682 | Msa0157190:intron | 60.0% |
| TCAGGTTTCGGGCGGGTCAA+CGG | - | chr1_4:24130258-24130277 | Msa0157190:intron | 60.0% | |
| CACCTCCTCCAAGATCCCTC+GGG | - | chr1_4:24130524-24130543 | Msa0157190:intron | 60.0% | |
| CGTGATAGTAGGTGGCCCGA+GGG | + | chr1_4:24130542-24130561 | None:intergenic | 60.0% | |
| ACGTGATAGTAGGTGGCCCG+AGG | + | chr1_4:24130543-24130562 | None:intergenic | 60.0% | |
| ACACCGGCGCTATAGCGTAG+TGG | - | chr1_4:24131404-24131423 | Msa0157190:intron | 60.0% | |
| GGGCCTATGGCCACCATAGA+AGG | + | chr1_4:24133703-24133722 | None:intergenic | 60.0% | |
| CTTCCTGTCCCTGGATCTGG+TGG | - | chr1_4:24134081-24134100 | Msa0157190:intron | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1_4:24126505-24126524 | None:intergenic | 65.0% | |
| GTAGGTGGCCCGAGGGATCT+TGG | + | chr1_4:24130535-24130554 | None:intergenic | 65.0% | |
| TTCCGGGGCGAATGGGACAC+AGG | - | chr1_4:24134605-24134624 | Msa0157190:intron | 65.0% | |
| TCCGGGGCGAATGGGACACA+GGG | - | chr1_4:24134606-24134625 | Msa0157190:intron | 65.0% | |
| TCCCTGTGTCCCATTCGCCC+CGG | + | chr1_4:24134610-24134629 | None:intergenic | 65.0% | |
| GGGCGAATGGGACACAGGGA+AGG | - | chr1_4:24134610-24134629 | Msa0157190:intron | 65.0% | |
| GGCCCGAGGGATCTTGGAGG+AGG | + | chr1_4:24130529-24130548 | None:intergenic | 70.0% | |
| GGTGGCCCGAGGGATCTTGG+AGG | + | chr1_4:24130532-24130551 | None:intergenic | 70.0% | |
| TGGTGGCCATGGCGCTGCCA+CGG | - | chr1_4:24133622-24133641 | Msa0157190:intron | 70.0% | |
| ATTCCGCCGTGGCAGCGCCA+TGG | + | chr1_4:24133631-24133650 | None:intergenic | 70.0% | |
| ATGGCGCTGCCACGGCGGAA+TGG | - | chr1_4:24133630-24133649 | Msa0157190:intron | 70.0% | |
| TCCACCACGCCATTCCGCCG+TGG | + | chr1_4:24133642-24133661 | None:intergenic | 70.0% | |
| TGGCCATGGCGCTGCCACGG+CGG | - | chr1_4:24133625-24133644 | Msa0157190:intron | 75.0% | |
| GCTGCCACGGCGGAATGGCG+TGG | - | chr1_4:24133635-24133654 | Msa0157190:intron | 75.0% | |
| GCCACGGCGGAATGGCGTGG+TGG | - | chr1_4:24133638-24133657 | Msa0157190:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 24125369 | 24134974 | 24125369 | ID=Msa0157190;Name=Msa0157190 |
| chr1_4 | mRNA | 24125369 | 24134974 | 24125369 | ID=Msa0157190-mRNA-1;Parent=Msa0157190;Name=Msa0157190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=120|0.75|0.92|1|0.91|1|13|257|402 |
| chr1_4 | exon | 24125369 | 24125766 | 24125369 | ID=Msa0157190-mRNA-1:exon:8394;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24126403 | 24126450 | 24126403 | ID=Msa0157190-mRNA-1:exon:8393;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24126859 | 24126918 | 24126859 | ID=Msa0157190-mRNA-1:exon:8392;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24127016 | 24127070 | 24127016 | ID=Msa0157190-mRNA-1:exon:8391;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24127608 | 24127657 | 24127608 | ID=Msa0157190-mRNA-1:exon:8390;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24131051 | 24131146 | 24131051 | ID=Msa0157190-mRNA-1:exon:8389;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24131260 | 24131337 | 24131260 | ID=Msa0157190-mRNA-1:exon:8388;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24133077 | 24133193 | 24133077 | ID=Msa0157190-mRNA-1:exon:8387;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24133286 | 24133354 | 24133286 | ID=Msa0157190-mRNA-1:exon:8386;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24133456 | 24133608 | 24133456 | ID=Msa0157190-mRNA-1:exon:8385;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24134222 | 24134392 | 24134222 | ID=Msa0157190-mRNA-1:exon:8384;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24134491 | 24134616 | 24134491 | ID=Msa0157190-mRNA-1:exon:8383;Parent=Msa0157190-mRNA-1 |
| chr1_4 | exon | 24134810 | 24134974 | 24134810 | ID=Msa0157190-mRNA-1:exon:8382;Parent=Msa0157190-mRNA-1 |
| chr1_4 | five_prime_UTR | 24134855 | 24134974 | 24134855 | ID=Msa0157190-mRNA-1:five_prime_utr;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24134810 | 24134854 | 24134810 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24134491 | 24134616 | 24134491 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24134222 | 24134392 | 24134222 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24133456 | 24133608 | 24133456 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24133286 | 24133354 | 24133286 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24133077 | 24133193 | 24133077 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24131260 | 24131337 | 24131260 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24131051 | 24131146 | 24131051 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24127608 | 24127657 | 24127608 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24127016 | 24127070 | 24127016 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24126859 | 24126918 | 24126859 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24126403 | 24126450 | 24126403 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | CDS | 24125626 | 24125766 | 24125626 | ID=Msa0157190-mRNA-1:cds;Parent=Msa0157190-mRNA-1 |
| chr1_4 | three_prime_UTR | 24125369 | 24125625 | 24125369 | ID=Msa0157190-mRNA-1:three_prime_utr;Parent=Msa0157190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
