Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159630 | A0A072VI51 | 90.365 | 301 | 4 | 3 | 3 | 279 | 1 | 300 | 0.0 | 536 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0159600 | Msa0159630 | 0.976031 | 4.696957e-141 | -8.615850e-47 |
| Msa0159630 | Msa1112180 | 0.803848 | 2.865324e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159630 | MtrunA17_Chr1g0171941 | 90.365 | 301 | 4 | 3 | 3 | 279 | 1 | 300 | 0.0 | 536 |
| Msa0159630 | MtrunA17_Chr8g0347131 | 37.667 | 300 | 148 | 10 | 9 | 278 | 48 | 338 | 6.02e-43 | 150 |
| Msa0159630 | MtrunA17_Chr7g0256541 | 40.183 | 219 | 82 | 7 | 27 | 206 | 1 | 209 | 2.89e-40 | 144 |
| Msa0159630 | MtrunA17_Chr7g0256531 | 40.244 | 164 | 63 | 6 | 55 | 193 | 20 | 173 | 4.50e-26 | 104 |
| Msa0159630 | MtrunA17_Chr6g0451151 | 32.461 | 191 | 92 | 7 | 113 | 274 | 42 | 224 | 1.56e-13 | 68.6 |
| Msa0159630 | MtrunA17_Chr7g0222601 | 47.273 | 55 | 28 | 1 | 16 | 70 | 16 | 69 | 3.53e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0159630 | AT3G10250.2 | 50.000 | 296 | 121 | 5 | 3 | 273 | 1 | 294 | 1.13e-91 | 275 |
| Msa0159630 | AT3G10250.5 | 50.000 | 296 | 121 | 5 | 3 | 273 | 1 | 294 | 1.13e-91 | 275 |
| Msa0159630 | AT3G10250.1 | 50.000 | 296 | 121 | 5 | 3 | 273 | 1 | 294 | 1.13e-91 | 275 |
| Msa0159630 | AT3G10250.4 | 50.000 | 296 | 121 | 5 | 3 | 273 | 1 | 294 | 1.13e-91 | 275 |
| Msa0159630 | AT3G10250.3 | 49.281 | 278 | 114 | 5 | 3 | 255 | 1 | 276 | 2.41e-83 | 252 |
| Msa0159630 | AT5G04090.2 | 49.828 | 291 | 120 | 6 | 3 | 278 | 1 | 280 | 7.58e-82 | 249 |
| Msa0159630 | AT5G04090.6 | 49.828 | 291 | 120 | 6 | 3 | 278 | 18 | 297 | 1.01e-81 | 249 |
| Msa0159630 | AT5G04090.4 | 45.247 | 263 | 118 | 6 | 31 | 278 | 1 | 252 | 5.25e-62 | 197 |
| Msa0159630 | AT5G04090.7 | 45.247 | 263 | 118 | 6 | 31 | 278 | 1 | 252 | 5.25e-62 | 197 |
| Msa0159630 | AT5G04090.3 | 41.564 | 243 | 117 | 5 | 51 | 278 | 7 | 239 | 8.71e-50 | 165 |
| Msa0159630 | AT5G04090.5 | 41.564 | 243 | 117 | 5 | 51 | 278 | 7 | 239 | 8.71e-50 | 165 |
| Msa0159630 | AT5G04090.1 | 41.564 | 243 | 117 | 5 | 51 | 278 | 7 | 239 | 8.71e-50 | 165 |
| Msa0159630 | AT3G61700.4 | 37.500 | 304 | 151 | 10 | 4 | 278 | 41 | 334 | 3.95e-41 | 145 |
| Msa0159630 | AT3G61700.1 | 37.500 | 304 | 151 | 10 | 4 | 278 | 43 | 336 | 4.88e-41 | 145 |
| Msa0159630 | AT3G61700.3 | 37.500 | 304 | 151 | 10 | 4 | 278 | 43 | 336 | 4.88e-41 | 145 |
| Msa0159630 | AT3G61700.2 | 36.893 | 309 | 151 | 10 | 4 | 278 | 43 | 341 | 2.54e-40 | 143 |
| Msa0159630 | AT2G46420.2 | 36.280 | 328 | 128 | 12 | 4 | 278 | 40 | 339 | 2.38e-39 | 140 |
| Msa0159630 | AT2G46420.3 | 36.280 | 328 | 128 | 12 | 4 | 278 | 40 | 339 | 3.87e-39 | 140 |
| Msa0159630 | AT2G46420.1 | 36.280 | 328 | 128 | 12 | 4 | 278 | 40 | 339 | 3.87e-39 | 140 |
| Msa0159630 | AT3G55240.1 | 46.269 | 67 | 35 | 1 | 16 | 82 | 10 | 75 | 1.94e-13 | 65.5 |
Find 70 sgRNAs with CRISPR-Local
Find 668 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCATCCTTCGGAGTTT+TGG | 0.205790 | 1_4:-30291649 | Msa0159630:CDS |
| ACTCCGAAGGATGAAATATC+TGG | 0.250315 | 1_4:+30291654 | None:intergenic |
| AATGAGAACTTCCTTCAAAA+TGG | 0.305622 | 1_4:-30291315 | Msa0159630:CDS |
| CTCTTTCTTATCAGATATAA+TGG | 0.313298 | 1_4:-30291373 | Msa0159630:intron |
| AGAGTTTCCACAACTTCTTT+TGG | 0.323088 | 1_4:+30294876 | None:intergenic |
| GAATACTAGGGTACGCGATT+TGG | 0.326435 | 1_4:-30291934 | Msa0159630:CDS |
| CAGCAGCAACCTCAGATAAT+AGG | 0.336558 | 1_4:+30293174 | None:intergenic |
| GTGGGTCGTCGCTGAATACT+AGG | 0.353386 | 1_4:-30291947 | Msa0159630:CDS |
| TTCTATGAATGGAGCACTCC+TGG | 0.381734 | 1_4:-30291679 | Msa0159630:CDS |
| AGCAAATAACAGAGTTCAAC+AGG | 0.384713 | 1_4:-30293147 | Msa0159630:CDS |
| TTCATCTCAAAACTCAAGCT+TGG | 0.398986 | 1_4:-30291862 | Msa0159630:CDS |
| TTCTGGCTTCACAGCTGCAC+TGG | 0.405095 | 1_4:+30292019 | None:intergenic |
| CTATCCAAGGTGTCCCTACC+TGG | 0.407605 | 1_4:-30291346 | Msa0159630:CDS |
| AGATGTCTGCTCGTGGCAAT+AGG | 0.410732 | 1_4:-30291908 | Msa0159630:CDS |
| TACCCACAATCTGTAGTAAT+GGG | 0.414613 | 1_4:-30290845 | Msa0159630:three_prime_UTR |
| TCATCTCAAAACTCAAGCTT+GGG | 0.415904 | 1_4:-30291861 | Msa0159630:intron |
| ATAGAAGTTTAGAAGTTTGA+CGG | 0.431645 | 1_4:-30290914 | Msa0159630:three_prime_UTR |
| GACCCAGATATTTCATCCTT+CGG | 0.436417 | 1_4:-30291657 | Msa0159630:CDS |
| GATCTGTGAGACGGGTTTCT+CGG | 0.438823 | 1_4:-30297160 | Msa0159630:CDS |
| CTGCATGATGTGTTTAATAA+TGG | 0.441491 | 1_4:-30291969 | Msa0159630:CDS |
| TCTTCGGTGAACGTGTGTAT+AGG | 0.442352 | 1_4:-30290875 | Msa0159630:three_prime_UTR |
| ATCTGTGAGACGGGTTTCTC+GGG | 0.448614 | 1_4:-30297159 | Msa0159630:CDS |
| ATATGTGAACCGTTAGAGTT+AGG | 0.452272 | 1_4:+30293067 | None:intergenic |
| AATGGGAAATTAAATTTGAA+AGG | 0.455061 | 1_4:-30290828 | Msa0159630:three_prime_UTR |
| TGCAAAGCTATGTACCCTAA+TGG | 0.456074 | 1_4:+30290742 | None:intergenic |
| CTACCCACAATCTGTAGTAA+TGG | 0.466859 | 1_4:-30290846 | Msa0159630:three_prime_UTR |
| TGGTCCTGATGGCACTGTCT+TGG | 0.468713 | 1_4:-30291766 | Msa0159630:CDS |
| ACTGCTGCATCACCAATAGT+TGG | 0.473168 | 1_4:+30291735 | None:intergenic |
| TCAAACTCTCATTCTATGAA+TGG | 0.480229 | 1_4:-30291690 | Msa0159630:CDS |
| CAACTGCAGTTGATTGTAGC+TGG | 0.484060 | 1_4:+30293098 | None:intergenic |
| TTTCCCATTACTACAGATTG+TGG | 0.486442 | 1_4:+30290842 | None:intergenic |
| TTGGAAGCATGCCCAACTAT+TGG | 0.488503 | 1_4:-30291747 | Msa0159630:CDS |
| GCTTCCAAGACAGTGCCATC+AGG | 0.512160 | 1_4:+30291762 | None:intergenic |
| CTGCTGCATCACCAATAGTT+GGG | 0.513220 | 1_4:+30291736 | None:intergenic |
| CTCCGAAGGATGAAATATCT+GGG | 0.525582 | 1_4:+30291655 | None:intergenic |
| AAAACAACCCAAAATAAAAG+AGG | 0.526906 | 1_4:+30290776 | None:intergenic |
| ACTATGAAATTCCAACTCTT+CGG | 0.528345 | 1_4:-30290891 | Msa0159630:three_prime_UTR |
| TTCCCATTACTACAGATTGT+GGG | 0.533381 | 1_4:+30290843 | None:intergenic |
| CATGATGTGTTTAATAATGG+TGG | 0.533640 | 1_4:-30291966 | Msa0159630:CDS |
| CAGCTACAATCAACTGCAGT+TGG | 0.536782 | 1_4:-30293097 | Msa0159630:CDS |
| GTCAAGTGGATCTGTGAGAC+GGG | 0.540059 | 1_4:-30297168 | Msa0159630:CDS |
| ACACACGTTCACCGAAGAGT+TGG | 0.548816 | 1_4:+30290880 | None:intergenic |
| TTATCTGAGGTTGCTGCTGA+AGG | 0.548929 | 1_4:-30293170 | Msa0159630:CDS |
| AGGATGAAATATCTGGGTCC+AGG | 0.551498 | 1_4:+30291661 | None:intergenic |
| CATTATTAAACACATCATGC+AGG | 0.555347 | 1_4:+30291970 | None:intergenic |
| TATGAACCCAAAAGAAGTTG+TGG | 0.557067 | 1_4:-30294883 | Msa0159630:CDS |
| CTGTCAGATCTGAAAGGCTG+AGG | 0.564552 | 1_4:+30291610 | None:intergenic |
| GAGATGAAAGCATGCTTGGT+GGG | 0.566351 | 1_4:+30291877 | None:intergenic |
| TGCTCAGCAGCATAGCAAGA+TGG | 0.577638 | 1_4:+30292044 | None:intergenic |
| TTCTCGGGAAGATATACAGC+TGG | 0.578107 | 1_4:-30297144 | Msa0159630:intron |
| TGAGATGAAAGCATGCTTGG+TGG | 0.588411 | 1_4:+30291876 | None:intergenic |
| GGAACTTCAGACATGTCAAG+TGG | 0.606675 | 1_4:-30297182 | Msa0159630:intron |
| AGAGTTCAACAGGTTGCTGA+AGG | 0.610651 | 1_4:-30293137 | Msa0159630:CDS |
| CTCATTAGTAGTACCCAGGT+AGG | 0.611879 | 1_4:+30291332 | None:intergenic |
| CTACCAAGTTCGGTAAAACC+AGG | 0.614163 | 1_4:+30294831 | None:intergenic |
| GTACCCAGGTAGGGACACCT+TGG | 0.616414 | 1_4:+30291342 | None:intergenic |
| TGTCAAGTGGATCTGTGAGA+CGG | 0.617662 | 1_4:-30297169 | Msa0159630:CDS |
| TATCCAAGGTGTCCCTACCT+GGG | 0.624459 | 1_4:-30291345 | Msa0159630:CDS |
| AATCAGCTGTCAGATCTGAA+AGG | 0.624793 | 1_4:+30291604 | None:intergenic |
| AGTTCTCATTAGTAGTACCC+AGG | 0.626500 | 1_4:+30291328 | None:intergenic |
| TCATTAGTAGTACCCAGGTA+GGG | 0.632492 | 1_4:+30291333 | None:intergenic |
| GGTTCGCTACCTAACTCTAA+CGG | 0.633214 | 1_4:-30293076 | Msa0159630:intron |
| TGGGTCGTCGCTGAATACTA+GGG | 0.638520 | 1_4:-30291946 | Msa0159630:CDS |
| TTGGCTCAGATGTCTGCTCG+TGG | 0.643582 | 1_4:-30291915 | Msa0159630:CDS |
| ATTATTAAACACATCATGCA+GGG | 0.645648 | 1_4:+30291971 | None:intergenic |
| AATCTGCCCCAAAACTCCGA+AGG | 0.659226 | 1_4:+30291641 | None:intergenic |
| AAGCCAGAAAATATGCGACA+TGG | 0.667121 | 1_4:-30292005 | Msa0159630:CDS |
| ATATAATGGAGAGCTATCCA+AGG | 0.674821 | 1_4:-30291359 | Msa0159630:CDS |
| ATGATGTGTTTAATAATGGT+GGG | 0.686419 | 1_4:-30291965 | Msa0159630:CDS |
| ATTAAACACATCATGCAGGG+TGG | 0.716140 | 1_4:+30291974 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTTATATGAATTT+GGG | - | chr1_4:30290664-30290683 | Msa0159630:three_prime_UTR | 10.0% |
| !!! | ACAACATATTTTTTTTATAA+CGG | + | chr1_4:30291653-30291672 | None:intergenic | 10.0% |
| !!! | CATTTTAATTATTCTAAAAT+TGG | + | chr1_4:30292507-30292526 | None:intergenic | 10.0% |
| !!! | TTGATAATAATAAGAAATTA+CGG | + | chr1_4:30296564-30296583 | Msa0159640:intron | 10.0% |
| !!! | GTTTGTTTTTTATATGAATT+TGG | - | chr1_4:30290663-30290682 | Msa0159630:three_prime_UTR | 15.0% |
| !! | AAACAAAAAAAAAAAAAAGG+TGG | + | chr1_4:30290784-30290803 | None:intergenic | 15.0% |
| !!! | CAACATATTTTTTTTATAAC+GGG | + | chr1_4:30291652-30291671 | None:intergenic | 15.0% |
| !!! | TACTTTTTTTTTTGTCAAAT+AGG | + | chr1_4:30291770-30291789 | None:intergenic | 15.0% |
| !!! | TTCATTTTCATTTATGAAAT+AGG | + | chr1_4:30293170-30293189 | None:intergenic | 15.0% |
| !!! | TGTGTTCTATTTTAATTTAA+TGG | - | chr1_4:30293319-30293338 | Msa0159630:intron | 15.0% |
| !!! | GTGTTCTATTTTAATTTAAT+GGG | - | chr1_4:30293320-30293339 | Msa0159630:intron | 15.0% |
| !!! | TGTTCTATTTTAATTTAATG+GGG | - | chr1_4:30293321-30293340 | Msa0159630:intron | 15.0% |
| !! | ATTGTATTATTGAATGTAAA+TGG | - | chr1_4:30294008-30294027 | Msa0159630:intron | 15.0% |
| !! | TTGTATTATTGAATGTAAAT+GGG | - | chr1_4:30294009-30294028 | Msa0159630:intron | 15.0% |
| !! | AATTAAATAAAAATGACATC+TGG | + | chr1_4:30295516-30295535 | Msa0159640:intron | 15.0% |
| !! | TATACTGATACAAATATATA+GGG | + | chr1_4:30296596-30296615 | Msa0159640:intron | 15.0% |
| !! | ATATACTGATACAAATATAT+AGG | + | chr1_4:30296597-30296616 | Msa0159640:intron | 15.0% |
| !! | CAATATTAAGTTAGTAATTA+TGG | + | chr1_4:30296671-30296690 | Msa0159640:intron | 15.0% |
| !!! | GTATGTTTATTATAAGTTTT+AGG | + | chr1_4:30296732-30296751 | Msa0159640:intron | 15.0% |
| !! | TAATAAATGTTTACTCAAAA+AGG | + | chr1_4:30297035-30297054 | Msa0159640:intron | 15.0% |
| !! | ATAGTTATAATAAAATGCAA+TGG | + | chr1_4:30297641-30297660 | None:intergenic | 15.0% |
| !! | AAACAAATATTATTACTACT+AGG | + | chr1_4:30299051-30299070 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAAGGTGGA+TGG | + | chr1_4:30290780-30290799 | None:intergenic | 20.0% |
| !!! | TAATTATTGATGGCATATTA+TGG | - | chr1_4:30291058-30291077 | Msa0159630:intron | 20.0% |
| !! | TCTATAACTTTGAATTATAG+AGG | - | chr1_4:30291168-30291187 | Msa0159630:intron | 20.0% |
| !! | TCGCTTAAAAAAATATATTG+TGG | - | chr1_4:30291672-30291691 | Msa0159630:CDS | 20.0% |
| !!! | ATGACTCGATTTTTTTTTTT+TGG | + | chr1_4:30292545-30292564 | None:intergenic | 20.0% |
| !! | TTTATTATGTCAAATGCATT+TGG | - | chr1_4:30292828-30292847 | Msa0159630:intron | 20.0% |
| !! | TTATTATGTCAAATGCATTT+GGG | - | chr1_4:30292829-30292848 | Msa0159630:intron | 20.0% |
| !!! | AATAAAAAGTATGTTGAACA+GGG | + | chr1_4:30292934-30292953 | None:intergenic | 20.0% |
| !!! | AAATAAAAAGTATGTTGAAC+AGG | + | chr1_4:30292935-30292954 | None:intergenic | 20.0% |
| !! | GTAAAACCATTATAAATACA+AGG | - | chr1_4:30293103-30293122 | Msa0159630:CDS | 20.0% |
| !! | CAAATAAAGAACAATCTTTA+CGG | + | chr1_4:30293301-30293320 | None:intergenic | 20.0% |
| !!! | TATTTTAATTTAATGGGGAA+AGG | - | chr1_4:30293326-30293345 | Msa0159630:intron | 20.0% |
| !! | ATATCTATTGCATTTCATTA+AGG | + | chr1_4:30293397-30293416 | None:intergenic | 20.0% |
| !!! | AGATATACAATGATTTTCTA+TGG | - | chr1_4:30293411-30293430 | Msa0159630:intron | 20.0% |
| !!! | GATATACAATGATTTTCTAT+GGG | - | chr1_4:30293412-30293431 | Msa0159630:intron | 20.0% |
| !!! | CTGCTTTGATATTTTAATTA+TGG | - | chr1_4:30293615-30293634 | Msa0159630:intron | 20.0% |
| !! | TTTCTTTATATTGAATTTCG+AGG | + | chr1_4:30293989-30294008 | None:intergenic | 20.0% |
| !! | AAATTTATTAAGAGTTGTCT+AGG | + | chr1_4:30294142-30294161 | None:intergenic | 20.0% |
| !! | CAAATAGTAGCAATATTTAT+TGG | + | chr1_4:30294276-30294295 | None:intergenic | 20.0% |
| !! | ATTCTATTTCCTAATCTTTA+GGG | + | chr1_4:30294943-30294962 | None:intergenic | 20.0% |
| !! | AATATTCACAACATATGTAA+AGG | + | chr1_4:30295359-30295378 | None:intergenic | 20.0% |
| !! | GTATCTATTATTATCTCTTA+GGG | - | chr1_4:30296509-30296528 | Msa0159630:intron | 20.0% |
| !! | TATTTGTATCAGTATATACA+AGG | - | chr1_4:30296600-30296619 | Msa0159630:intron | 20.0% |
| !! | ATTTGTATCAGTATATACAA+GGG | - | chr1_4:30296601-30296620 | Msa0159630:intron | 20.0% |
| !!! | AGAAAATCAAGAATTTTTCA+AGG | - | chr1_4:30296835-30296854 | Msa0159630:intron | 20.0% |
| !!! | ATTATTTTGAATAGCATATC+AGG | - | chr1_4:30297079-30297098 | Msa0159630:intron | 20.0% |
| !! | TATAATTGGAAAAAGTTAGT+TGG | - | chr1_4:30297187-30297206 | Msa0159630:intron | 20.0% |
| !! | ATAATTGGAAAAAGTTAGTT+GGG | - | chr1_4:30297188-30297207 | Msa0159630:intron | 20.0% |
| !! | GCAATAATTCATAAATGTTA+AGG | + | chr1_4:30297214-30297233 | Msa0159640:CDS | 20.0% |
| !! | TATGTTGCAATCAAAAAAAT+TGG | - | chr1_4:30297319-30297338 | Msa0159630:intron | 20.0% |
| !!! | AATCAAAAAAATTGGTTTCA+TGG | - | chr1_4:30297327-30297346 | Msa0159630:intron | 20.0% |
| !!! | ATCAAAAAAATTGGTTTCAT+GGG | - | chr1_4:30297328-30297347 | Msa0159630:intron | 20.0% |
| !! | CAATTGTTTAGAAAGTAAAT+GGG | - | chr1_4:30297702-30297721 | Msa0159630:intron | 20.0% |
| !! | TCTTAATCTTTGACAATAAA+AGG | - | chr1_4:30298841-30298860 | Msa0159630:intron | 20.0% |
| !! | CTTAATCTTTGACAATAAAA+GGG | - | chr1_4:30298842-30298861 | Msa0159630:intron | 20.0% |
| !! | AATGGGAAATTAAATTTGAA+AGG | - | chr1_4:30299204-30299223 | Msa0159630:intron | 20.0% |
| ! | ATTTGATTGATGTAGAGAAA+AGG | + | chr1_4:30290903-30290922 | None:intergenic | 25.0% |
| !!! | CTGTGATTTTTTTTTCTTTC+CGG | - | chr1_4:30290938-30290957 | Msa0159630:three_prime_UTR | 25.0% |
| ! | TTCTCTGTCTTAATTATTGA+TGG | - | chr1_4:30291048-30291067 | Msa0159630:intron | 25.0% |
| !!! | CTTTGAGATGAATTATAAGA+GGG | - | chr1_4:30291111-30291130 | Msa0159630:intron | 25.0% |
| ! | AATTCATTCAGTGAAAGTTT+AGG | - | chr1_4:30291136-30291155 | Msa0159630:intron | 25.0% |
| ! | AGAAAATTTGAGGAAACATA+AGG | - | chr1_4:30291322-30291341 | Msa0159630:CDS | 25.0% |
| ! | GAAAATTTGAGGAAACATAA+GGG | - | chr1_4:30291323-30291342 | Msa0159630:CDS | 25.0% |
| !!! | ATATTTTTTTTATAACGGGC+CGG | + | chr1_4:30291648-30291667 | None:intergenic | 25.0% |
| ! | AAAAAAGTAAGTAGACAAGT+TGG | - | chr1_4:30291781-30291800 | Msa0159630:CDS | 25.0% |
| ! | TGTTTAGAAGGTAATTGAAT+TGG | - | chr1_4:30291977-30291996 | Msa0159630:CDS | 25.0% |
| ! | AAAAAGAAACACATGAGAAA+AGG | + | chr1_4:30292373-30292392 | None:intergenic | 25.0% |
| !!! | AAGGAAATTTCTGAAATTCT+AGG | + | chr1_4:30292438-30292457 | None:intergenic | 25.0% |
| ! | AAGAATGCCTATTAATCATA+TGG | - | chr1_4:30292478-30292497 | Msa0159630:intron | 25.0% |
| ! | TTGGAAACCATATGATTAAT+AGG | + | chr1_4:30292488-30292507 | None:intergenic | 25.0% |
| ! | TAAGTGTGTAAATTGATGTT+TGG | - | chr1_4:30292616-30292635 | Msa0159630:intron | 25.0% |
| ! | ATTGATGTCAAATTTCTCTT+AGG | - | chr1_4:30292657-30292676 | Msa0159630:intron | 25.0% |
| ! | TAGGATGAAAATGTTAATAC+TGG | - | chr1_4:30292676-30292695 | Msa0159630:intron | 25.0% |
| ! | CATAAATGAAAATGAATGCT+TGG | - | chr1_4:30293174-30293193 | Msa0159630:CDS | 25.0% |
| !! | ATTAGTATCCTTGTTTCTTT+CGG | + | chr1_4:30293895-30293914 | None:intergenic | 25.0% |
| ! | CAATTGTGATAAAACAGAAA+AGG | - | chr1_4:30294049-30294068 | Msa0159630:intron | 25.0% |
| ! | AGTTTCAGATATAAAAGAGA+GGG | + | chr1_4:30294190-30294209 | None:intergenic | 25.0% |
| ! | AGCAATATTTATTGGAATCT+AGG | + | chr1_4:30294268-30294287 | None:intergenic | 25.0% |
| ! | AACATTATTCAGTCTTAAGA+TGG | + | chr1_4:30294833-30294852 | None:intergenic | 25.0% |
| ! | GATTCTATTTCCTAATCTTT+AGG | + | chr1_4:30294944-30294963 | None:intergenic | 25.0% |
| ! | GGAAATAGAATCAACATAAA+AGG | - | chr1_4:30294952-30294971 | Msa0159630:intron | 25.0% |
| ! | AGAAAAATTACTACCAAGTT+CGG | + | chr1_4:30295214-30295233 | None:intergenic | 25.0% |
| ! | GAATATTCCTGTATTTATGA+TGG | - | chr1_4:30295372-30295391 | Msa0159630:intron | 25.0% |
| ! | AAATAAAAATGACATCTGGT+GGG | + | chr1_4:30295512-30295531 | Msa0159640:CDS | 25.0% |
| ! | TAAATAAAAATGACATCTGG+TGG | + | chr1_4:30295513-30295532 | Msa0159640:intron | 25.0% |
| ! | AGATTCTTTACTAAAATGCA+AGG | - | chr1_4:30295597-30295616 | Msa0159630:intron | 25.0% |
| ! | TTCAACATAAATTCATGCAA+CGG | + | chr1_4:30295669-30295688 | Msa0159640:intron | 25.0% |
| !! | TATTTAGTAATTTGCCTTGA+AGG | + | chr1_4:30295794-30295813 | Msa0159640:intron | 25.0% |
| ! | TTCAAGGCAAATTACTAAAT+AGG | - | chr1_4:30295793-30295812 | Msa0159630:intron | 25.0% |
| ! | AGACTCATACTTTACAAATT+TGG | + | chr1_4:30295955-30295974 | Msa0159640:intron | 25.0% |
| !!! | TTTTTAGGTTACCATGATAT+TGG | + | chr1_4:30296278-30296297 | Msa0159640:intron | 25.0% |
| ! | AGATAGGAACATATTTACAA+GGG | + | chr1_4:30296326-30296345 | Msa0159640:intron | 25.0% |
| ! | TAAGATCAGTTTCTTATCTT+AGG | - | chr1_4:30296486-30296505 | Msa0159630:intron | 25.0% |
| ! | AAGATCAGTTTCTTATCTTA+GGG | - | chr1_4:30296487-30296506 | Msa0159630:intron | 25.0% |
| ! | GGTATCTATTATTATCTCTT+AGG | - | chr1_4:30296508-30296527 | Msa0159630:intron | 25.0% |
| ! | TGTATTAATGTGTTTCAGTT+TGG | - | chr1_4:30296798-30296817 | Msa0159630:intron | 25.0% |
| !!! | GAAACTAATATTGACTTACA+TGG | + | chr1_4:30296995-30297014 | Msa0159640:intron | 25.0% |
| !! | GTAAGTCAATATTAGTTTCA+TGG | - | chr1_4:30296996-30297015 | Msa0159630:intron | 25.0% |
| ! | GCAATTGTTTAGAAAGTAAA+TGG | - | chr1_4:30297701-30297720 | Msa0159630:intron | 25.0% |
| ! | AAGACTATTTAAGAATACCA+CGG | - | chr1_4:30297788-30297807 | Msa0159630:intron | 25.0% |
| ! | AAAAATTATAGTAGTTTCCG+TGG | + | chr1_4:30297808-30297827 | None:intergenic | 25.0% |
| ! | TTAAGAAAAGAGATAAGTGT+TGG | + | chr1_4:30297954-30297973 | None:intergenic | 25.0% |
| ! | ATTATTAAACACATCATGCA+GGG | + | chr1_4:30298064-30298083 | None:intergenic | 25.0% |
| ! | ATGATGTGTTTAATAATGGT+GGG | - | chr1_4:30298067-30298086 | Msa0159630:intron | 25.0% |
| ! | GTTTGATTCAAGGAATTAAT+GGG | - | chr1_4:30298193-30298212 | Msa0159630:intron | 25.0% |
| ! | TTTGATTCAAGGAATTAATG+GGG | - | chr1_4:30298194-30298213 | Msa0159630:intron | 25.0% |
| ! | ATGTACAAAATTAAAAAGCC+TGG | + | chr1_4:30298604-30298623 | None:intergenic | 25.0% |
| ! | CTCTTTCTTATCAGATATAA+TGG | - | chr1_4:30298659-30298678 | Msa0159630:intron | 25.0% |
| !! | TTTGACAATAAAAGGGTATA+AGG | - | chr1_4:30298849-30298868 | Msa0159630:intron | 25.0% |
| ! | ATACAATGGTAAAATAACGA+AGG | + | chr1_4:30298999-30299018 | None:intergenic | 25.0% |
| ! | ATTTCATGCTTTGTATACAA+TGG | + | chr1_4:30299013-30299032 | None:intergenic | 25.0% |
| !! | TACAAAGCATGAAATCATTT+TGG | - | chr1_4:30299018-30299037 | Msa0159630:intron | 25.0% |
| ! | ATAGAAGTTTAGAAGTTTGA+CGG | - | chr1_4:30299118-30299137 | Msa0159630:intron | 25.0% |
| !!! | AATGAACTCCTCTTTTATTT+TGG | - | chr1_4:30299248-30299267 | Msa0159630:intron | 25.0% |
| !!! | ATGAACTCCTCTTTTATTTT+GGG | - | chr1_4:30299249-30299268 | Msa0159630:intron | 25.0% |
| ! | AAAACAACCCAAAATAAAAG+AGG | + | chr1_4:30299259-30299278 | None:intergenic | 25.0% |
| ! | TATAACCGAAGTATTATTGC+TGG | - | chr1_4:30290687-30290706 | Msa0159630:three_prime_UTR | 30.0% |
| ! | ATAACCGAAGTATTATTGCT+GGG | - | chr1_4:30290688-30290707 | Msa0159630:three_prime_UTR | 30.0% |
| ! | TTTTCCCAGCAATAATACTT+CGG | + | chr1_4:30290695-30290714 | None:intergenic | 30.0% |
| GGTGATCATATCATATTGAT+CGG | - | chr1_4:30290715-30290734 | Msa0159630:three_prime_UTR | 30.0% | |
| AAAAAAAAAAGGTGGATGGA+TGG | + | chr1_4:30290776-30290795 | None:intergenic | 30.0% | |
| GAGAAGAGAACCTTATAAAT+CGG | - | chr1_4:30290965-30290984 | Msa0159630:intron | 30.0% | |
| !! | GACAGAAATACCGATTTATA+AGG | + | chr1_4:30290978-30290997 | None:intergenic | 30.0% |
| !! | GCTTTGAGATGAATTATAAG+AGG | - | chr1_4:30291110-30291129 | Msa0159630:intron | 30.0% |
| ATTCCAAGGAAGAAAATTTG+AGG | - | chr1_4:30291312-30291331 | Msa0159630:CDS | 30.0% | |
| ! | TTTCCTCAAATTTTCTTCCT+TGG | + | chr1_4:30291318-30291337 | None:intergenic | 30.0% |
| !! | TCTTAGGTTTAGCTTTATGT+TGG | - | chr1_4:30291459-30291478 | Msa0159630:intron | 30.0% |
| ACAAGCTTATGAGACAAATT+TGG | - | chr1_4:30291700-30291719 | Msa0159630:CDS | 30.0% | |
| CAAGCTTATGAGACAAATTT+GGG | - | chr1_4:30291701-30291720 | Msa0159630:CDS | 30.0% | |
| !! | TTTGGGTTATGATGGATTAT+TGG | - | chr1_4:30291718-30291737 | Msa0159630:CDS | 30.0% |
| !! | TTGGGTTATGATGGATTATT+GGG | - | chr1_4:30291719-30291738 | Msa0159630:CDS | 30.0% |
| !! | ATATTCTAGTTTCCAATCAC+TGG | + | chr1_4:30292005-30292024 | None:intergenic | 30.0% |
| CTAGAATATAGCATGTTTCT+AGG | - | chr1_4:30292016-30292035 | Msa0159630:CDS | 30.0% | |
| !!! | TGGATTAGTCATTTTTCTAG+AGG | - | chr1_4:30292312-30292331 | Msa0159630:intron | 30.0% |
| ! | TTCTCATGTGTTTCTTTTTC+TGG | - | chr1_4:30292374-30292393 | Msa0159630:intron | 30.0% |
| CGAGGAAGTTATAAAATCAA+AGG | + | chr1_4:30293008-30293027 | None:intergenic | 30.0% | |
| GAAGTAATAACAATCAATCG+AGG | + | chr1_4:30293026-30293045 | None:intergenic | 30.0% | |
| ! | TCTAGAATATACAACTTCCT+AGG | - | chr1_4:30293044-30293063 | Msa0159630:intron | 30.0% |
| TATTTAGTAAGCACTATCCT+AGG | + | chr1_4:30293064-30293083 | None:intergenic | 30.0% | |
| CACACACCTTGTATTTATAA+TGG | + | chr1_4:30293112-30293131 | None:intergenic | 30.0% | |
| ! | GCAAAAAGATTGTTTCTTTG+AGG | - | chr1_4:30293213-30293232 | Msa0159630:CDS | 30.0% |
| CAGTTGAATATGTTCGTTTA+CGG | - | chr1_4:30293248-30293267 | Msa0159630:intron | 30.0% | |
| TGAATTCACGAAATGATATC+TGG | + | chr1_4:30293360-30293379 | None:intergenic | 30.0% | |
| ! | TACAATGATTTTCTATGGGA+AGG | - | chr1_4:30293416-30293435 | Msa0159630:intron | 30.0% |
| ! | CAATCAAATCCCTTGATTTT+GGG | + | chr1_4:30293647-30293666 | None:intergenic | 30.0% |
| ! | ACAATCAAATCCCTTGATTT+TGG | + | chr1_4:30293648-30293667 | None:intergenic | 30.0% |
| TTGTGTTAGAACCATTAGTA+TGG | - | chr1_4:30293664-30293683 | Msa0159630:intron | 30.0% | |
| TGTGTTAGAACCATTAGTAT+GGG | - | chr1_4:30293665-30293684 | Msa0159630:intron | 30.0% | |
| AAGGATACTAATGAGCTAAA+AGG | - | chr1_4:30293903-30293922 | Msa0159630:intron | 30.0% | |
| AGGATACTAATGAGCTAAAA+GGG | - | chr1_4:30293904-30293923 | Msa0159630:intron | 30.0% | |
| GAGTTTCAGATATAAAAGAG+AGG | + | chr1_4:30294191-30294210 | None:intergenic | 30.0% | |
| AGTTTCAGTTATTCAAGAGA+AGG | + | chr1_4:30294242-30294261 | None:intergenic | 30.0% | |
| TGTGATAGAACACTAAGATA+AGG | + | chr1_4:30294333-30294352 | None:intergenic | 30.0% | |
| ATATGAAAAACACAGCAATC+AGG | - | chr1_4:30294368-30294387 | Msa0159630:intron | 30.0% | |
| ! | CTACACATCTTCTAATTTGT+GGG | + | chr1_4:30294539-30294558 | None:intergenic | 30.0% |
| TCTACACATCTTCTAATTTG+TGG | + | chr1_4:30294540-30294559 | None:intergenic | 30.0% | |
| ACCTATATATCAAAGAGAGA+CGG | - | chr1_4:30294864-30294883 | Msa0159630:CDS | 30.0% | |
| ! | ATTTCCTAATCTTTAGGGAT+TGG | + | chr1_4:30294938-30294957 | None:intergenic | 30.0% |
| ATCAACATAAAAGGATAACC+AGG | - | chr1_4:30294961-30294980 | Msa0159630:intron | 30.0% | |
| AAAGATTGCAGCAAATTCAA+TGG | - | chr1_4:30294984-30295003 | Msa0159630:intron | 30.0% | |
| AAGATTGCAGCAAATTCAAT+GGG | - | chr1_4:30294985-30295004 | Msa0159630:intron | 30.0% | |
| ! | CTTTTATCTGACTTTTGCTA+TGG | - | chr1_4:30295070-30295089 | Msa0159630:intron | 30.0% |
| !! | CTTTTGCTATGGTGTTTATT+TGG | - | chr1_4:30295081-30295100 | Msa0159630:intron | 30.0% |
| ! | TGGTAGTAATTTTTCTTCAG+TGG | - | chr1_4:30295218-30295237 | Msa0159630:intron | 30.0% |
| ACTAAATTGTCAAATGCACA+AGG | + | chr1_4:30295286-30295305 | None:intergenic | 30.0% | |
| ! | TATTTTGTCTTCTGTCTTTG+AGG | - | chr1_4:30295544-30295563 | Msa0159630:intron | 30.0% |
| ! | ATTTTGTCTTCTGTCTTTGA+GGG | - | chr1_4:30295545-30295564 | Msa0159630:intron | 30.0% |
| AGATGTATTCCAATTTGTGT+TGG | + | chr1_4:30295765-30295784 | Msa0159640:intron | 30.0% | |
| TTAGGCGATGAAATGTAAAT+GGG | + | chr1_4:30295823-30295842 | Msa0159640:intron | 30.0% | |
| ! | GAATTTTTCCACAATGAGTT+AGG | + | chr1_4:30295841-30295860 | Msa0159640:intron | 30.0% |
| ! | ATGCTTGAAATTTCAAGTAC+AGG | - | chr1_4:30296038-30296057 | Msa0159630:intron | 30.0% |
| !!! | GCTAGAACATGACTTTTTTT+AGG | + | chr1_4:30296293-30296312 | Msa0159640:intron | 30.0% |
| CAGATAGGAACATATTTACA+AGG | + | chr1_4:30296327-30296346 | Msa0159640:intron | 30.0% | |
| CTTGTAAATATGTTCCTATC+TGG | - | chr1_4:30296325-30296344 | Msa0159630:intron | 30.0% | |
| ATATGTTCCTATCTGGATTA+AGG | - | chr1_4:30296332-30296351 | Msa0159630:intron | 30.0% | |
| !! | ACTAATATTGACTTACATGG+AGG | + | chr1_4:30296992-30297011 | Msa0159640:intron | 30.0% |
| !! | TTTTTAAGAGACTGCAAAAC+AGG | + | chr1_4:30297060-30297079 | Msa0159640:intron | 30.0% |
| ! | TGAACCAAATACTTAACTTG+AGG | + | chr1_4:30297297-30297316 | None:intergenic | 30.0% |
| !!! | TACCCTTTATTTTACACAAG+AGG | - | chr1_4:30297437-30297456 | Msa0159630:intron | 30.0% |
| AGCCTCTTGTGTAAAATAAA+GGG | + | chr1_4:30297442-30297461 | None:intergenic | 30.0% | |
| TGTAGTTTATAACCAAGAGA+TGG | + | chr1_4:30297531-30297550 | None:intergenic | 30.0% | |
| TTGTTTAGAAAGTAAATGGG+TGG | - | chr1_4:30297705-30297724 | Msa0159630:intron | 30.0% | |
| ! | CTATAATTTTTCTTGCAGAG+AGG | - | chr1_4:30297817-30297836 | Msa0159630:intron | 30.0% |
| GTAGTAAAAAAACAAGCAAC+TGG | + | chr1_4:30297890-30297909 | None:intergenic | 30.0% | |
| !!! | GTTGCTTGTTTTTTTACTAC+AGG | - | chr1_4:30297890-30297909 | Msa0159630:intron | 30.0% |
| CATTATTAAACACATCATGC+AGG | + | chr1_4:30298065-30298084 | None:intergenic | 30.0% | |
| CTGCATGATGTGTTTAATAA+TGG | - | chr1_4:30298063-30298082 | Msa0159630:intron | 30.0% | |
| CATGATGTGTTTAATAATGG+TGG | - | chr1_4:30298066-30298085 | Msa0159630:intron | 30.0% | |
| GGTTTGATTCAAGGAATTAA+TGG | - | chr1_4:30298192-30298211 | Msa0159630:intron | 30.0% | |
| TTGATTCAAGGAATTAATGG+GGG | - | chr1_4:30298195-30298214 | Msa0159630:intron | 30.0% | |
| TCAAACTCTCATTCTATGAA+TGG | - | chr1_4:30298342-30298361 | Msa0159630:intron | 30.0% | |
| ! | AACGTTGACTAGTTATGAAT+TGG | + | chr1_4:30298482-30298501 | None:intergenic | 30.0% |
| AATCACTTTATACTTCAACC+AGG | - | chr1_4:30298583-30298602 | Msa0159630:intron | 30.0% | |
| AATGAGAACTTCCTTCAAAA+TGG | - | chr1_4:30298717-30298736 | Msa0159630:intron | 30.0% | |
| ! | TACTTTGTTCTCCATTTTGA+AGG | + | chr1_4:30298731-30298750 | None:intergenic | 30.0% |
| TATTTGTTTATCTTGCTTGC+AGG | - | chr1_4:30299062-30299081 | Msa0159630:intron | 30.0% | |
| ACTATGAAATTCCAACTCTT+CGG | - | chr1_4:30299141-30299160 | Msa0159630:intron | 30.0% | |
| !!! | TTTTTTGTTCTGTGTCCATT+AGG | - | chr1_4:30299275-30299294 | Msa0159630:intron | 30.0% |
| ! | TTTTTGTTCTGTGTCCATTA+GGG | - | chr1_4:30299276-30299295 | Msa0159630:intron | 30.0% |
| ! | GCAATGTTTTTCATTTGATC+AGG | + | chr1_4:30299431-30299450 | None:intergenic | 30.0% |
| ! | GAAGTATTATTGCTGGGAAA+AGG | - | chr1_4:30290694-30290713 | Msa0159630:three_prime_UTR | 35.0% |
| TAAGGTTCTCTTCTCAATTC+CGG | + | chr1_4:30290960-30290979 | None:intergenic | 35.0% | |
| !! | AGCTTAGCTTTGTAACATCA+AGG | + | chr1_4:30291242-30291261 | None:intergenic | 35.0% |
| ! | TTTGCCTTTTCATTGTCATG+GGG | + | chr1_4:30291371-30291390 | None:intergenic | 35.0% |
| ! | CTTTGCCTTTTCATTGTCAT+GGG | + | chr1_4:30291372-30291391 | None:intergenic | 35.0% |
| ! | TCTTTGCCTTTTCATTGTCA+TGG | + | chr1_4:30291373-30291392 | None:intergenic | 35.0% |
| ATGACAATGAAAAGGCAAAG+AGG | - | chr1_4:30291372-30291391 | Msa0159630:intron | 35.0% | |
| TGACAATGAAAAGGCAAAGA+GGG | - | chr1_4:30291373-30291392 | Msa0159630:intron | 35.0% | |
| !! | TTAGGTGGACTAGATATCTT+AGG | - | chr1_4:30291443-30291462 | Msa0159630:intron | 35.0% |
| TCTCAACTTTCCAATACAGA+TGG | - | chr1_4:30291486-30291505 | Msa0159630:intron | 35.0% | |
| TTCCAATACAGATGGAAAAG+CGG | - | chr1_4:30291494-30291513 | Msa0159630:intron | 35.0% | |
| ! | GAGACAAATTTGGGTTATGA+TGG | - | chr1_4:30291710-30291729 | Msa0159630:CDS | 35.0% |
| AGGTCAGACAAAATTTACAG+TGG | + | chr1_4:30291750-30291769 | None:intergenic | 35.0% | |
| ATTGAATTGGTACCAGTGAT+TGG | - | chr1_4:30291990-30292009 | Msa0159630:CDS | 35.0% | |
| AAGGATAAAGTGAACGTAGT+TGG | - | chr1_4:30292146-30292165 | Msa0159630:intron | 35.0% | |
| ! | GCGAGTTTTACCAATTCATT+AGG | - | chr1_4:30292244-30292263 | Msa0159630:intron | 35.0% |
| ! | TTTTACCAACAAGCAGAGAA+TGG | - | chr1_4:30292276-30292295 | Msa0159630:intron | 35.0% |
| AACAAGCAGAGAATGGTATT+GGG | - | chr1_4:30292283-30292302 | Msa0159630:intron | 35.0% | |
| GAATCCTTAGAATTGCACAA+AGG | - | chr1_4:30292568-30292587 | Msa0159630:intron | 35.0% | |
| ATCACCTTTGTGCAATTCTA+AGG | + | chr1_4:30292575-30292594 | None:intergenic | 35.0% | |
| AATGTTAATACTGGCATCCT+TGG | - | chr1_4:30292685-30292704 | Msa0159630:intron | 35.0% | |
| TGGTTTAAACTTTGCTGACA+AGG | - | chr1_4:30292720-30292739 | Msa0159630:intron | 35.0% | |
| !! | AACAGTTGATAGTAGTTGCA+AGG | + | chr1_4:30292791-30292810 | None:intergenic | 35.0% |
| !! | AAGATTGTTTCTTTGAGGCT+TGG | - | chr1_4:30293218-30293237 | Msa0159630:CDS | 35.0% |
| ATTTCGTGAATTCATGCTCA+AGG | - | chr1_4:30293366-30293385 | Msa0159630:intron | 35.0% | |
| ! | ATTTTCTATGGGAAGGATGA+AGG | - | chr1_4:30293423-30293442 | Msa0159630:intron | 35.0% |
| CGTTCTTAAAACCCTTTAGT+AGG | - | chr1_4:30293465-30293484 | Msa0159630:intron | 35.0% | |
| CTAAGGAAACTCCTACTAAA+GGG | + | chr1_4:30293479-30293498 | None:intergenic | 35.0% | |
| AACCATTAGTATGGGTAATG+TGG | - | chr1_4:30293673-30293692 | Msa0159630:intron | 35.0% | |
| GTGACAAATTAGAGATGAGA+GGG | - | chr1_4:30293712-30293731 | Msa0159630:intron | 35.0% | |
| TAGTTCTCGATCATTGTAAC+AGG | + | chr1_4:30293841-30293860 | None:intergenic | 35.0% | |
| GGATACTAATGAGCTAAAAG+GGG | - | chr1_4:30293905-30293924 | Msa0159630:intron | 35.0% | |
| GATACTAATGAGCTAAAAGG+GGG | - | chr1_4:30293906-30293925 | Msa0159630:intron | 35.0% | |
| ATACTAATGAGCTAAAAGGG+GGG | - | chr1_4:30293907-30293926 | Msa0159630:intron | 35.0% | |
| TTCTTAATGACTAACCCTCT+AGG | - | chr1_4:30294213-30294232 | Msa0159630:intron | 35.0% | |
| ! | AGTTTTCTTAGCAGCTGTTT+TGG | + | chr1_4:30294448-30294467 | None:intergenic | 35.0% |
| ! | CAGCTGCTAAGAAAACTTTT+TGG | - | chr1_4:30294451-30294470 | Msa0159630:intron | 35.0% |
| !! | AGGTTTCATTGCTGTTGTTT+TGG | + | chr1_4:30294496-30294515 | None:intergenic | 35.0% |
| TCCTGAAAAAGCTGATAGTA+TGG | - | chr1_4:30294564-30294583 | Msa0159630:intron | 35.0% | |
| GACATCACCATTTGGATAAA+AGG | + | chr1_4:30294715-30294734 | None:intergenic | 35.0% | |
| TATACAAGGACATCACCATT+TGG | + | chr1_4:30294723-30294742 | None:intergenic | 35.0% | |
| TTTGATGTCAGGTGTATACA+AGG | + | chr1_4:30294737-30294756 | None:intergenic | 35.0% | |
| !! | CTAGTTTCAGTTTTGATGTC+AGG | + | chr1_4:30294748-30294767 | None:intergenic | 35.0% |
| CTGACATCAAAACTGAAACT+AGG | - | chr1_4:30294746-30294765 | Msa0159630:intron | 35.0% | |
| AAGGTTTAGCTACCATCAAA+GGG | + | chr1_4:30294777-30294796 | None:intergenic | 35.0% | |
| GTAGCTAAACCTTGAAACTA+GGG | - | chr1_4:30294784-30294803 | Msa0159630:intron | 35.0% | |
| TTGCAAAAACCCTAGTTTCA+AGG | + | chr1_4:30294796-30294815 | None:intergenic | 35.0% | |
| TTAAGATGGTATCAAGAGCT+AGG | + | chr1_4:30294819-30294838 | None:intergenic | 35.0% | |
| CCTATATATCAAAGAGAGAC+GGG | - | chr1_4:30294865-30294884 | Msa0159630:CDS | 35.0% | |
| CTATATATCAAAGAGAGACG+GGG | - | chr1_4:30294866-30294885 | Msa0159630:CDS | 35.0% | |
| AGATTGCAGCAAATTCAATG+GGG | - | chr1_4:30294986-30295005 | Msa0159630:intron | 35.0% | |
| AGAGAGTAGAGTGAATCATA+AGG | + | chr1_4:30295052-30295071 | None:intergenic | 35.0% | |
| ! | GTTCTATGAGATTTTGTACC+TGG | + | chr1_4:30295113-30295132 | None:intergenic | 35.0% |
| TATGAACCCAAAAGAAGTTG+TGG | - | chr1_4:30295149-30295168 | Msa0159630:intron | 35.0% | |
| ! | GAGTTTCCACAACTTCTTTT+GGG | + | chr1_4:30295158-30295177 | None:intergenic | 35.0% |
| ! | AGAGTTTCCACAACTTCTTT+TGG | + | chr1_4:30295159-30295178 | None:intergenic | 35.0% |
| !! | AGTTGATAGAATCTTCGAGA+GGG | - | chr1_4:30295325-30295344 | Msa0159630:intron | 35.0% |
| GAGGATTCCATCATAAATAC+AGG | + | chr1_4:30295382-30295401 | None:intergenic | 35.0% | |
| GTAATCATCGAATCGAAAAC+AGG | + | chr1_4:30295482-30295501 | Msa0159640:CDS | 35.0% | |
| CATAAATTCATGCAACGGAT+AGG | + | chr1_4:30295664-30295683 | Msa0159640:intron | 35.0% | |
| ! | TTAGTAATTTGCCTTGAAGG+TGG | + | chr1_4:30295791-30295810 | Msa0159640:intron | 35.0% |
| GTTAGGCGATGAAATGTAAA+TGG | + | chr1_4:30295824-30295843 | Msa0159640:intron | 35.0% | |
| TCCAACATATTTCCTCAAGA+AGG | - | chr1_4:30295905-30295924 | Msa0159630:intron | 35.0% | |
| TCCTTCTTGAGGAAATATGT+TGG | + | chr1_4:30295909-30295928 | Msa0159640:intron | 35.0% | |
| TGAGTCTTACATCAGACTAA+TGG | - | chr1_4:30295968-30295987 | Msa0159630:intron | 35.0% | |
| ! | AGAAAGTACAAAAGCTGTGT+TGG | + | chr1_4:30296097-30296116 | Msa0159640:intron | 35.0% |
| GAAACTTCGTACCAATATCA+TGG | - | chr1_4:30296264-30296283 | Msa0159630:intron | 35.0% | |
| ACATATTTACAAGGGACGTT+TGG | + | chr1_4:30296318-30296337 | Msa0159640:intron | 35.0% | |
| TTCCTATCTGGATTAAGGTT+TGG | - | chr1_4:30296337-30296356 | Msa0159630:intron | 35.0% | |
| AACCAAACCTTAATCCAGAT+AGG | + | chr1_4:30296342-30296361 | Msa0159640:intron | 35.0% | |
| !! | TTTTCAAGGCCTATTATCTG+AGG | - | chr1_4:30296849-30296868 | Msa0159630:intron | 35.0% |
| AGCAAATAACAGAGTTCAAC+AGG | - | chr1_4:30296885-30296904 | Msa0159630:intron | 35.0% | |
| ATATGTGAACCGTTAGAGTT+AGG | + | chr1_4:30296968-30296987 | Msa0159640:intron | 35.0% | |
| ATATGCAATGTGCTAGGAAA+GGG | + | chr1_4:30297170-30297189 | Msa0159640:CDS | 35.0% | |
| TATATGCAATGTGCTAGGAA+AGG | + | chr1_4:30297171-30297190 | Msa0159640:CDS | 35.0% | |
| CCAATTATATGCAATGTGCT+AGG | + | chr1_4:30297176-30297195 | Msa0159640:CDS | 35.0% | |
| CCTAGCACATTGCATATAAT+TGG | - | chr1_4:30297173-30297192 | Msa0159630:CDS | 35.0% | |
| GTTGCCTCAAGTTAAGTATT+TGG | - | chr1_4:30297290-30297309 | Msa0159630:intron | 35.0% | |
| ATTGCGTACAATACACCAAA+TGG | + | chr1_4:30297415-30297434 | None:intergenic | 35.0% | |
| CAGCCTCTTGTGTAAAATAA+AGG | + | chr1_4:30297443-30297462 | None:intergenic | 35.0% | |
| ATAACCAAGAGATGGATACT+TGG | + | chr1_4:30297523-30297542 | None:intergenic | 35.0% | |
| !! | AATGCCTATTTTGAAGAGTG+TGG | - | chr1_4:30297593-30297612 | Msa0159630:intron | 35.0% |
| TCCTCTTTGAGCTGAAAAAT+CGG | - | chr1_4:30297743-30297762 | Msa0159630:intron | 35.0% | |
| !!! | TTTTGAGATGAAAGCATGCT+TGG | + | chr1_4:30298162-30298181 | None:intergenic | 35.0% |
| TTCATCTCAAAACTCAAGCT+TGG | - | chr1_4:30298170-30298189 | Msa0159630:intron | 35.0% | |
| TCATCTCAAAACTCAAGCTT+GGG | - | chr1_4:30298171-30298190 | Msa0159630:intron | 35.0% | |
| TGATTCAAGGAATTAATGGG+GGG | - | chr1_4:30298196-30298215 | Msa0159630:intron | 35.0% | |
| AAATCAGAACCTGGATATTC+AGG | - | chr1_4:30298225-30298244 | Msa0159630:intron | 35.0% | |
| CAGGACCAAAAATATAAGGA+GGG | + | chr1_4:30298254-30298273 | None:intergenic | 35.0% | |
| TCAGGACCAAAAATATAAGG+AGG | + | chr1_4:30298255-30298274 | None:intergenic | 35.0% | |
| CCATCAGGACCAAAAATATA+AGG | + | chr1_4:30298258-30298277 | None:intergenic | 35.0% | |
| !!! | CCTTATATTTTTGGTCCTGA+TGG | - | chr1_4:30298255-30298274 | Msa0159630:intron | 35.0% |
| ! | TATTTCATCCTTCGGAGTTT+TGG | - | chr1_4:30298383-30298402 | Msa0159630:intron | 35.0% |
| ! | ATTTCATCCTTCGGAGTTTT+GGG | - | chr1_4:30298384-30298403 | Msa0159630:intron | 35.0% |
| GTACATTAGCACTAACAGAT+TGG | - | chr1_4:30298635-30298654 | Msa0159630:intron | 35.0% | |
| ! | ATATAATGGAGAGCTATCCA+AGG | - | chr1_4:30298673-30298692 | Msa0159630:intron | 35.0% |
| ! | TAACAGCATGACATAATGGA+TGG | + | chr1_4:30298804-30298823 | None:intergenic | 35.0% |
| AGCATAACAGCATGACATAA+TGG | + | chr1_4:30298808-30298827 | None:intergenic | 35.0% | |
| ! | AATCGTGCTACTATTCAAAC+TGG | - | chr1_4:30298926-30298945 | Msa0159630:intron | 35.0% |
| !! | GAAGGTTTGAAGCTTTTCTT+TGG | + | chr1_4:30298981-30299000 | None:intergenic | 35.0% |
| TACCCACAATCTGTAGTAAT+GGG | - | chr1_4:30299187-30299206 | Msa0159630:intron | 35.0% | |
| TTCCCATTACTACAGATTGT+GGG | + | chr1_4:30299192-30299211 | None:intergenic | 35.0% | |
| TTTCCCATTACTACAGATTG+TGG | + | chr1_4:30299193-30299212 | None:intergenic | 35.0% | |
| ! | CATTTTACAACCGTTCCTGA+GGG | - | chr1_4:30291201-30291220 | Msa0159630:intron | 40.0% |
| ! | ATTTTACAACCGTTCCTGAG+GGG | - | chr1_4:30291202-30291221 | Msa0159630:intron | 40.0% |
| GAAACATAAGGGTTCCATAG+AGG | - | chr1_4:30291334-30291353 | Msa0159630:CDS | 40.0% | |
| AATGAAAAGGCAAAGAGGGT+GGG | - | chr1_4:30291377-30291396 | Msa0159630:intron | 40.0% | |
| TCCAATACAGATGGAAAAGC+GGG | - | chr1_4:30291495-30291514 | Msa0159630:intron | 40.0% | |
| TTAAGCAGGGCAAGTCTAAA+CGG | + | chr1_4:30291531-30291550 | None:intergenic | 40.0% | |
| CGCTTAACTCGCTGAAAAAA+CGG | + | chr1_4:30291821-30291840 | None:intergenic | 40.0% | |
| !!! | CGTTTTTTCAGCGAGTTAAG+CGG | - | chr1_4:30291819-30291838 | Msa0159630:intron | 40.0% |
| !!! | GTTTTTTCAGCGAGTTAAGC+GGG | - | chr1_4:30291820-30291839 | Msa0159630:intron | 40.0% |
| !!! | TTTTTTCAGCGAGTTAAGCG+GGG | - | chr1_4:30291821-30291840 | Msa0159630:intron | 40.0% |
| ! | TTTTCGTCCTTGGAAACTAG+GGG | + | chr1_4:30291944-30291963 | None:intergenic | 40.0% |
| ! | CTTTTCGTCCTTGGAAACTA+GGG | + | chr1_4:30291945-30291964 | None:intergenic | 40.0% |
| GGAATACCGAAAGAAGTTCA+GGG | - | chr1_4:30292091-30292110 | Msa0159630:intron | 40.0% | |
| TGAACTCCCTGAACTTCTTT+CGG | + | chr1_4:30292100-30292119 | None:intergenic | 40.0% | |
| GATAAAGTGAACGTAGTTGG+TGG | - | chr1_4:30292149-30292168 | Msa0159630:intron | 40.0% | |
| TGCATCAATGTCGAACTTTC+TGG | - | chr1_4:30292172-30292191 | Msa0159630:intron | 40.0% | |
| GCATCAATGTCGAACTTTCT+GGG | - | chr1_4:30292173-30292192 | Msa0159630:intron | 40.0% | |
| CATCAATGTCGAACTTTCTG+GGG | - | chr1_4:30292174-30292193 | Msa0159630:intron | 40.0% | |
| AGAGGAGCCTCAAATTCATT+AGG | - | chr1_4:30292217-30292236 | Msa0159630:intron | 40.0% | |
| CGCTTCTCCTAATGAATTTG+AGG | + | chr1_4:30292227-30292246 | None:intergenic | 40.0% | |
| ACTCGCTTCTCCTAATGAAT+TGG | + | chr1_4:30292230-30292249 | None:intergenic | 40.0% | |
| CAATACCATTCTCTGCTTGT+TGG | + | chr1_4:30292284-30292303 | None:intergenic | 40.0% | |
| CAACAAGCAGAGAATGGTAT+TGG | - | chr1_4:30292282-30292301 | Msa0159630:intron | 40.0% | |
| ACAAGCAGAGAATGGTATTG+GGG | - | chr1_4:30292284-30292303 | Msa0159630:intron | 40.0% | |
| !! | TACAGCTGGTAAGTTGATCT+TGG | - | chr1_4:30292902-30292921 | Msa0159630:intron | 40.0% |
| !! | ACAGCTGGTAAGTTGATCTT+GGG | - | chr1_4:30292903-30292922 | Msa0159630:intron | 40.0% |
| AAAGTATGTTGAACAGGGTG+AGG | + | chr1_4:30292929-30292948 | None:intergenic | 40.0% | |
| TGGGAAGGATGAAGGTAATA+TGG | - | chr1_4:30293431-30293450 | Msa0159630:intron | 40.0% | |
| CCTAAGGAAACTCCTACTAA+AGG | + | chr1_4:30293480-30293499 | None:intergenic | 40.0% | |
| CCTTTAGTAGGAGTTTCCTT+AGG | - | chr1_4:30293477-30293496 | Msa0159630:intron | 40.0% | |
| GAGTTTCCTTAGGAACTTCA+AGG | - | chr1_4:30293487-30293506 | Msa0159630:intron | 40.0% | |
| ATGGTCATGTCCCAAAATCA+AGG | - | chr1_4:30293634-30293653 | Msa0159630:intron | 40.0% | |
| TGGTCATGTCCCAAAATCAA+GGG | - | chr1_4:30293635-30293654 | Msa0159630:intron | 40.0% | |
| CACCACATTACCCATACTAA+TGG | + | chr1_4:30293678-30293697 | None:intergenic | 40.0% | |
| TTAGTATGGGTAATGTGGTG+AGG | - | chr1_4:30293678-30293697 | Msa0159630:intron | 40.0% | |
| !! | ATGTGGTGAGGTGTTTTATG+AGG | - | chr1_4:30293690-30293709 | Msa0159630:intron | 40.0% |
| GGTGACAAATTAGAGATGAG+AGG | - | chr1_4:30293711-30293730 | Msa0159630:intron | 40.0% | |
| ! | GATGTTTCTGACCATACAGT+AGG | + | chr1_4:30293742-30293761 | None:intergenic | 40.0% |
| AATCAGGCAAACCAGAAAAC+TGG | - | chr1_4:30294384-30294403 | Msa0159630:intron | 40.0% | |
| !! | GCCATACTATCAGCTTTTTC+AGG | + | chr1_4:30294568-30294587 | None:intergenic | 40.0% |
| AAGCTGATAGTATGGCAAAC+CGG | - | chr1_4:30294572-30294591 | Msa0159630:intron | 40.0% | |
| TTGGATAAAAGGACGCCAAT+CGG | + | chr1_4:30294704-30294723 | None:intergenic | 40.0% | |
| ! | TTGGCGTCCTTTTATCCAAA+TGG | - | chr1_4:30294705-30294724 | Msa0159630:intron | 40.0% |
| AGGTTTAGCTACCATCAAAG+GGG | + | chr1_4:30294776-30294795 | None:intergenic | 40.0% | |
| CAAGGTTTAGCTACCATCAA+AGG | + | chr1_4:30294778-30294797 | None:intergenic | 40.0% | |
| GGTAGCTAAACCTTGAAACT+AGG | - | chr1_4:30294783-30294802 | Msa0159630:intron | 40.0% | |
| CCCGTCTCTCTTTGATATAT+AGG | + | chr1_4:30294868-30294887 | None:intergenic | 40.0% | |
| !! | CTAATCTTTAGGGATTGGCT+AGG | + | chr1_4:30294933-30294952 | None:intergenic | 40.0% |
| CTAGCCAATCCCTAAAGATT+AGG | - | chr1_4:30294931-30294950 | Msa0159630:intron | 40.0% | |
| !! | GAATTTGCTGCAATCTTTCC+TGG | + | chr1_4:30294982-30295001 | None:intergenic | 40.0% |
| !! | GTGTTTATTTGGCTCTTTCC+AGG | - | chr1_4:30295092-30295111 | Msa0159630:intron | 40.0% |
| !! | GAGTTGATAGAATCTTCGAG+AGG | - | chr1_4:30295324-30295343 | Msa0159630:intron | 40.0% |
| ! | TCTTTGAGGGTTTGCAACAT+GGG | - | chr1_4:30295558-30295577 | Msa0159630:intron | 40.0% |
| AACTTCGTGCCAACACAAAT+TGG | - | chr1_4:30295753-30295772 | Msa0159630:intron | 40.0% | |
| ATACATCTTGACCACCTTCA+AGG | - | chr1_4:30295777-30295796 | Msa0159630:intron | 40.0% | |
| TTTCATCGCCTAACTCATTG+TGG | - | chr1_4:30295830-30295849 | Msa0159630:intron | 40.0% | |
| TATGTTGGAACTCACAGTTG+AGG | + | chr1_4:30295894-30295913 | Msa0159640:intron | 40.0% | |
| ! | CATTTTGGACATCCTTCTTG+AGG | + | chr1_4:30295920-30295939 | Msa0159640:intron | 40.0% |
| CTCAAGAAGGATGTCCAAAA+TGG | - | chr1_4:30295918-30295937 | Msa0159630:intron | 40.0% | |
| ! | TGGCTTCAACACAACCATTT+TGG | + | chr1_4:30295935-30295954 | Msa0159640:intron | 40.0% |
| !!! | CAGGCTCTGAAATTTTGTCA+TGG | - | chr1_4:30296057-30296076 | Msa0159630:intron | 40.0% |
| ! | ATGTTCTAGCTACCAACGAT+GGG | - | chr1_4:30296123-30296142 | Msa0159630:intron | 40.0% |
| !! | ATGGGTTGGTCCAATTAGTA+AGG | - | chr1_4:30296141-30296160 | Msa0159630:intron | 40.0% |
| !! | TGGGTTGGTCCAATTAGTAA+GGG | - | chr1_4:30296142-30296161 | Msa0159630:intron | 40.0% |
| GTCCAATTAGTAAGGGACTT+GGG | - | chr1_4:30296149-30296168 | Msa0159630:intron | 40.0% | |
| AAACCTAATAGAGCGAGTCA+AGG | + | chr1_4:30297107-30297126 | Msa0159640:intron | 40.0% | |
| ! | AATGTGCTAGGAAAGGGTAT+GGG | + | chr1_4:30297164-30297183 | Msa0159640:CDS | 40.0% |
| TAACTTGAGGCAACACAAAC+AGG | + | chr1_4:30297284-30297303 | None:intergenic | 40.0% | |
| !! | CCTATTTTGAAGAGTGTGGT+GGG | - | chr1_4:30297597-30297616 | Msa0159630:intron | 40.0% |
| TGCAGCATAGTGTAGTGAAA+GGG | + | chr1_4:30297684-30297703 | None:intergenic | 40.0% | |
| TTGCAGCATAGTGTAGTGAA+AGG | + | chr1_4:30297685-30297704 | None:intergenic | 40.0% | |
| !! | ACCGATTTTTCAGCTCAAAG+AGG | + | chr1_4:30297747-30297766 | None:intergenic | 40.0% |
| GGTAATGATAAGCTGGAAAG+TGG | - | chr1_4:30297838-30297857 | Msa0159630:intron | 40.0% | |
| !! | GCATAGCAAGATGGATTTTG+AGG | + | chr1_4:30297982-30298001 | None:intergenic | 40.0% |
| AAGCCAGAAAATATGCGACA+TGG | - | chr1_4:30298027-30298046 | Msa0159630:intron | 40.0% | |
| ! | AGACCATGTCGCATATTTTC+TGG | + | chr1_4:30298033-30298052 | None:intergenic | 40.0% |
| ATTAAACACATCATGCAGGG+TGG | + | chr1_4:30298061-30298080 | None:intergenic | 40.0% | |
| TCAAGCTTGGGTTTGATTCA+AGG | - | chr1_4:30298183-30298202 | Msa0159630:intron | 40.0% | |
| GGGATGATAAAATCAGAACC+TGG | - | chr1_4:30298216-30298235 | Msa0159630:intron | 40.0% | |
| ! | GGTAGCCCTCCTTATATTTT+TGG | - | chr1_4:30298246-30298265 | Msa0159630:intron | 40.0% |
| GACCCAGATATTTCATCCTT+CGG | - | chr1_4:30298375-30298394 | Msa0159630:intron | 40.0% | |
| CTCCGAAGGATGAAATATCT+GGG | + | chr1_4:30298380-30298399 | None:intergenic | 40.0% | |
| ACTCCGAAGGATGAAATATC+TGG | + | chr1_4:30298381-30298400 | None:intergenic | 40.0% | |
| ! | TTTCATCCTTCGGAGTTTTG+GGG | - | chr1_4:30298385-30298404 | Msa0159630:intron | 40.0% |
| AATCAGCTGTCAGATCTGAA+AGG | + | chr1_4:30298431-30298450 | None:intergenic | 40.0% | |
| !! | GCTGATTTTTCTCAGAGTTC+TGG | - | chr1_4:30298444-30298463 | Msa0159630:intron | 40.0% |
| ! | AGTCAACGTTGCATCTGTTT+TGG | - | chr1_4:30298492-30298511 | Msa0159630:intron | 40.0% |
| ACTGATCATCATCACTCATC+AGG | + | chr1_4:30298555-30298574 | None:intergenic | 40.0% | |
| TCATTAGTAGTACCCAGGTA+GGG | + | chr1_4:30298702-30298721 | None:intergenic | 40.0% | |
| AGTTCTCATTAGTAGTACCC+AGG | + | chr1_4:30298707-30298726 | None:intergenic | 40.0% | |
| GATATTCTCTCTTCCTCTCA+AGG | + | chr1_4:30298782-30298801 | None:intergenic | 40.0% | |
| TAAGGCTCGATTTATGACTC+TGG | - | chr1_4:30298867-30298886 | Msa0159630:intron | 40.0% | |
| AAGGCTCGATTTATGACTCT+GGG | - | chr1_4:30298868-30298887 | Msa0159630:intron | 40.0% | |
| TAATAAAGCACAACCTGCCA+AGG | - | chr1_4:30298955-30298974 | Msa0159630:intron | 40.0% | |
| ! | TTGAAGCTTTTCTTTGGCCT+TGG | + | chr1_4:30298975-30298994 | None:intergenic | 40.0% |
| CTACCCACAATCTGTAGTAA+TGG | - | chr1_4:30299186-30299205 | Msa0159630:intron | 40.0% | |
| TGCAAAGCTATGTACCCTAA+TGG | + | chr1_4:30299293-30299312 | None:intergenic | 40.0% | |
| AAGGTGGATGGATGGATAGA+TGG | + | chr1_4:30290768-30290787 | None:intergenic | 45.0% | |
| CCTCAGGAACGGTTGTAAAA+TGG | + | chr1_4:30291203-30291222 | None:intergenic | 45.0% | |
| ! | CCATTTTACAACCGTTCCTG+AGG | - | chr1_4:30291200-30291219 | Msa0159630:intron | 45.0% |
| ATCACCTCAAGTGACAGACA+AGG | - | chr1_4:30291286-30291305 | Msa0159630:intron | 45.0% | |
| TCACCTCAAGTGACAGACAA+GGG | - | chr1_4:30291287-30291306 | Msa0159630:intron | 45.0% | |
| ! | TTACCCTTGTCTGTCACTTG+AGG | + | chr1_4:30291293-30291312 | None:intergenic | 45.0% |
| GACAGACAAGGGTAATTCCA+AGG | - | chr1_4:30291298-30291317 | Msa0159630:intron | 45.0% | |
| CATAAGGGTTCCATAGAGGA+AGG | - | chr1_4:30291338-30291357 | Msa0159630:CDS | 45.0% | |
| AGGACCCCATGACAATGAAA+AGG | - | chr1_4:30291364-30291383 | Msa0159630:intron | 45.0% | |
| CAATGAAAAGGCAAAGAGGG+TGG | - | chr1_4:30291376-30291395 | Msa0159630:intron | 45.0% | |
| GTGGGAGAGGATGATAAGAT+TGG | - | chr1_4:30291395-30291414 | Msa0159630:intron | 45.0% | |
| GGAGAGGATGATAAGATTGG+AGG | - | chr1_4:30291398-30291417 | Msa0159630:intron | 45.0% | |
| !! | ATTGGAGGTACCTACTTCAC+TGG | - | chr1_4:30291413-30291432 | Msa0159630:intron | 45.0% |
| TAAGTCCTCACCAGTGAAGT+AGG | + | chr1_4:30291426-30291445 | None:intergenic | 45.0% | |
| TACTTCACTGGTGAGGACTT+AGG | - | chr1_4:30291425-30291444 | Msa0159630:intron | 45.0% | |
| TAAGCAGGGCAAGTCTAAAC+GGG | + | chr1_4:30291530-30291549 | None:intergenic | 45.0% | |
| !! | AAGACGAGCCGAGTCATTTT+AGG | - | chr1_4:30291564-30291583 | Msa0159630:intron | 45.0% |
| CTCGGTCACCTAAAATGACT+CGG | + | chr1_4:30291575-30291594 | None:intergenic | 45.0% | |
| AACTCGCTGAAAAAACGGAG+CGG | + | chr1_4:30291816-30291835 | None:intergenic | 45.0% | |
| TTGAACTCATCCCCTCTACT+TGG | + | chr1_4:30291851-30291870 | None:intergenic | 45.0% | |
| ! | CCTTTTCGTCCTTGGAAACT+AGG | + | chr1_4:30291946-30291965 | None:intergenic | 45.0% |
| CCTAGTTTCCAAGGACGAAA+AGG | - | chr1_4:30291943-30291962 | Msa0159630:CDS | 45.0% | |
| ! | GTTGCACTGGTGTGTTTAGA+AGG | - | chr1_4:30291965-30291984 | Msa0159630:CDS | 45.0% |
| ! | TCCAGACAAAACGTGTCGAT+GGG | - | chr1_4:30292044-30292063 | Msa0159630:CDS | 45.0% |
| GGGAATACCGAAAGAAGTTC+AGG | - | chr1_4:30292090-30292109 | Msa0159630:intron | 45.0% | |
| ATCCTTCATCCCACACATGA+AGG | + | chr1_4:30292132-30292151 | None:intergenic | 45.0% | |
| ! | AGAATGGTATTGGGGAGGAA+TGG | - | chr1_4:30292292-30292311 | Msa0159630:intron | 45.0% |
| CAAGTTGCTTCTTGAAGCTC+TGG | - | chr1_4:30292337-30292356 | Msa0159630:intron | 45.0% | |
| ATCCTTGGAAGACTAGGTAG+TGG | - | chr1_4:30292700-30292719 | Msa0159630:intron | 45.0% | |
| ! | AACCACTACCTAGTCTTCCA+AGG | + | chr1_4:30292705-30292724 | None:intergenic | 45.0% |
| GGAACTTCAGACATGTCAAG+TGG | - | chr1_4:30292850-30292869 | Msa0159630:intron | 45.0% | |
| TGTCAAGTGGATCTGTGAGA+CGG | - | chr1_4:30292863-30292882 | Msa0159630:intron | 45.0% | |
| TTCTCGGGAAGATATACAGC+TGG | - | chr1_4:30292888-30292907 | Msa0159630:intron | 45.0% | |
| ! | GAAGTGCCTTGAAGTTCCTA+AGG | + | chr1_4:30293496-30293515 | None:intergenic | 45.0% |
| GAGAGGGATTACCTACTGTA+TGG | - | chr1_4:30293728-30293747 | Msa0159630:intron | 45.0% | |
| ! | CTGCTTACTTTGGCTCACTT+TGG | + | chr1_4:30293805-30293824 | None:intergenic | 45.0% |
| CAAAGTGAGCCAAAGTAAGC+AGG | - | chr1_4:30293803-30293822 | Msa0159630:intron | 45.0% | |
| TCTCTTCAGCCTGCTTACTT+TGG | + | chr1_4:30293815-30293834 | None:intergenic | 45.0% | |
| ! | TCTCCAACAGTGTTGAAGCA+AGG | - | chr1_4:30293862-30293881 | Msa0159630:intron | 45.0% |
| ! | CAACAGTGTTGAAGCAAGGT+GGG | - | chr1_4:30293866-30293885 | Msa0159630:intron | 45.0% |
| GGTAGGAGTTCTGTAAACTC+TGG | + | chr1_4:30294085-30294104 | None:intergenic | 45.0% | |
| AGAGAAGTTCTCTCTGGTCT+AGG | + | chr1_4:30294119-30294138 | None:intergenic | 45.0% | |
| TCTAGGAGAGAAGTTCTCTC+TGG | + | chr1_4:30294125-30294144 | None:intergenic | 45.0% | |
| TTCTGTATGCATCACCCTCT+AGG | - | chr1_4:30294161-30294180 | Msa0159630:intron | 45.0% | |
| AAAAGAGAGGGAAGCCTAGA+GGG | + | chr1_4:30294178-30294197 | None:intergenic | 45.0% | |
| TAAAAGAGAGGGAAGCCTAG+AGG | + | chr1_4:30294179-30294198 | None:intergenic | 45.0% | |
| TCAAGAGAAGGAAGCCTAGA+GGG | + | chr1_4:30294230-30294249 | None:intergenic | 45.0% | |
| TTCAAGAGAAGGAAGCCTAG+AGG | + | chr1_4:30294231-30294250 | None:intergenic | 45.0% | |
| TAGAAGCTTGTAGACGCTGT+AGG | + | chr1_4:30294303-30294322 | None:intergenic | 45.0% | |
| GCTCAAGCAAAAATTGAGCC+TGG | - | chr1_4:30295183-30295202 | Msa0159630:intron | 45.0% | |
| CTACCAAGTTCGGTAAAACC+AGG | + | chr1_4:30295204-30295223 | None:intergenic | 45.0% | |
| ATGCACAAGGCAGTAAAGCA+GGG | + | chr1_4:30295273-30295292 | None:intergenic | 45.0% | |
| AATGCACAAGGCAGTAAAGC+AGG | + | chr1_4:30295274-30295293 | None:intergenic | 45.0% | |
| ATATGCAATCGCAGCATCAG+AGG | + | chr1_4:30295401-30295420 | Msa0159640:CDS | 45.0% | |
| ! | GTCTTTGAGGGTTTGCAACA+TGG | - | chr1_4:30295557-30295576 | Msa0159630:intron | 45.0% |
| ! | TTGTGTTGGCACGAAGTTCA+AGG | + | chr1_4:30295751-30295770 | Msa0159640:intron | 45.0% |
| ! | CATGTTCTAGCTACCAACGA+TGG | - | chr1_4:30296122-30296141 | Msa0159630:intron | 45.0% |
| TAATTGGACCAACCCATCGT+TGG | + | chr1_4:30296138-30296157 | Msa0159640:intron | 45.0% | |
| GGTCCAATTAGTAAGGGACT+TGG | - | chr1_4:30296148-30296167 | Msa0159630:intron | 45.0% | |
| ! | GGAGATTAGTCACTGCTAAG+CGG | - | chr1_4:30296236-30296255 | Msa0159630:intron | 45.0% |
| CAGCAGCAACCTCAGATAAT+AGG | + | chr1_4:30296861-30296880 | Msa0159640:intron | 45.0% | |
| ! | TTATCTGAGGTTGCTGCTGA+AGG | - | chr1_4:30296862-30296881 | Msa0159630:intron | 45.0% |
| AGAGTTCAACAGGTTGCTGA+AGG | - | chr1_4:30296895-30296914 | Msa0159630:intron | 45.0% | |
| CAACTGCAGTTGATTGTAGC+TGG | + | chr1_4:30296937-30296956 | Msa0159640:intron | 45.0% | |
| CAGCTACAATCAACTGCAGT+TGG | - | chr1_4:30296935-30296954 | Msa0159630:intron | 45.0% | |
| GGTTCGCTACCTAACTCTAA+CGG | - | chr1_4:30296956-30296975 | Msa0159630:intron | 45.0% | |
| ! | GTTCCTTGACTCGCTCTATT+AGG | - | chr1_4:30297101-30297120 | Msa0159630:intron | 45.0% |
| CAATGTGCTAGGAAAGGGTA+TGG | + | chr1_4:30297165-30297184 | Msa0159640:CDS | 45.0% | |
| !! | TATGCAGGAGTTTTGTGCCT+GGG | + | chr1_4:30297368-30297387 | None:intergenic | 45.0% |
| ACAAAACTCCTGCATACGCA+AGG | - | chr1_4:30297372-30297391 | Msa0159630:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1_4:30297412-30297431 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1_4:30297448-30297467 | Msa0159630:intron | 45.0% |
| GTTGTTGTCACGTGACTGAA+AGG | + | chr1_4:30297488-30297507 | None:intergenic | 45.0% | |
| !! | GCCTATTTTGAAGAGTGTGG+TGG | - | chr1_4:30297596-30297615 | Msa0159630:intron | 45.0% |
| CCCACCACACTCTTCAAAAT+AGG | + | chr1_4:30297600-30297619 | None:intergenic | 45.0% | |
| ! | TTTGAAGAGTGTGGTGGGAT+TGG | - | chr1_4:30297602-30297621 | Msa0159630:intron | 45.0% |
| AGCATAGTGTAGTGAAAGGG+AGG | + | chr1_4:30297681-30297700 | None:intergenic | 45.0% | |
| GCAGAGAGGTAATGATAAGC+TGG | - | chr1_4:30297831-30297850 | Msa0159630:intron | 45.0% | |
| AAGCAACTGGATTGCACACT+CGG | + | chr1_4:30297877-30297896 | None:intergenic | 45.0% | |
| GAATACTAGGGTACGCGATT+TGG | - | chr1_4:30298098-30298117 | Msa0159630:intron | 45.0% | |
| ! | GAGATGAAAGCATGCTTGGT+GGG | + | chr1_4:30298158-30298177 | None:intergenic | 45.0% |
| ! | TGAGATGAAAGCATGCTTGG+TGG | + | chr1_4:30298159-30298178 | None:intergenic | 45.0% |
| ! | TTGGAAGCATGCCCAACTAT+TGG | - | chr1_4:30298285-30298304 | Msa0159630:intron | 45.0% |
| CTGCTGCATCACCAATAGTT+GGG | + | chr1_4:30298299-30298318 | None:intergenic | 45.0% | |
| ACTGCTGCATCACCAATAGT+TGG | + | chr1_4:30298300-30298319 | None:intergenic | 45.0% | |
| ! | TTCTATGAATGGAGCACTCC+TGG | - | chr1_4:30298353-30298372 | Msa0159630:intron | 45.0% |
| AGGATGAAATATCTGGGTCC+AGG | + | chr1_4:30298374-30298393 | None:intergenic | 45.0% | |
| !!! | ACGTTGCATCTGTTTTGGTG+TGG | - | chr1_4:30298497-30298516 | Msa0159630:intron | 45.0% |
| CTCATTAGTAGTACCCAGGT+AGG | + | chr1_4:30298703-30298722 | None:intergenic | 45.0% | |
| TCAAGGTTGGACAGGAAAGA+GGG | + | chr1_4:30298765-30298784 | None:intergenic | 45.0% | |
| TTCTCTCTTCCTCTCAAGGT+TGG | + | chr1_4:30298778-30298797 | None:intergenic | 45.0% | |
| TCTTCGGTGAACGTGTGTAT+AGG | - | chr1_4:30299157-30299176 | Msa0159630:intron | 45.0% | |
| !! | ATTAAACAAAAAAAAAAAAA+AGG | + | chr1_4:30290787-30290806 | None:intergenic | 5.0% |
| !!! | AATAAATTTTAGTATATTAA+AGG | + | chr1_4:30292457-30292476 | None:intergenic | 5.0% |
| GGATGGATAGATGGAGGTGA+CGG | + | chr1_4:30290759-30290778 | None:intergenic | 50.0% | |
| GTGGATGGATGGATAGATGG+AGG | + | chr1_4:30290765-30290784 | None:intergenic | 50.0% | |
| ! | CTCGCTCTTCTTTTCCTCTC+AGG | - | chr1_4:30290831-30290850 | Msa0159630:three_prime_UTR | 50.0% |
| AGTTCGAATCCCCTCAGGAA+CGG | + | chr1_4:30291214-30291233 | None:intergenic | 50.0% | |
| TGCTAAGTTCGAATCCCCTC+AGG | + | chr1_4:30291219-30291238 | None:intergenic | 50.0% | |
| GTGATAGCAGGTGATAGCTC+AGG | + | chr1_4:30291271-30291290 | None:intergenic | 50.0% | |
| ! | CTGTCACTTGAGGTGATAGC+AGG | + | chr1_4:30291283-30291302 | None:intergenic | 50.0% |
| GGTTCCATAGAGGAAGGAGA+AGG | - | chr1_4:30291344-30291363 | Msa0159630:CDS | 50.0% | |
| AGGTACCTACTTCACTGGTG+AGG | - | chr1_4:30291418-30291437 | Msa0159630:intron | 50.0% | |
| TTCACTGGTGAGGACTTAGG+TGG | - | chr1_4:30291428-30291447 | Msa0159630:intron | 50.0% | |
| !! | GCCCGCTTTTCCATCTGTAT+TGG | + | chr1_4:30291499-30291518 | None:intergenic | 50.0% |
| AAGCAGGGCAAGTCTAAACG+GGG | + | chr1_4:30291529-30291548 | None:intergenic | 50.0% | |
| !! | GTGTTTAGCGGGCTTAAGCA+GGG | + | chr1_4:30291544-30291563 | None:intergenic | 50.0% |
| !! | TGTGTTTAGCGGGCTTAAGC+AGG | + | chr1_4:30291545-30291564 | None:intergenic | 50.0% |
| ! | TCGGCTCGTCTTGTGTTTAG+CGG | + | chr1_4:30291556-30291575 | None:intergenic | 50.0% |
| ! | GCAGGGTGGGATTTTGTACT+CGG | + | chr1_4:30291593-30291612 | None:intergenic | 50.0% |
| ! | AAGTAGACAAGTTGGCGAGC+CGG | - | chr1_4:30291789-30291808 | Msa0159630:intron | 50.0% |
| ACTCGCTGAAAAAACGGAGC+GGG | + | chr1_4:30291815-30291834 | None:intergenic | 50.0% | |
| ACTCAGCCTGCCAAAAGTAG+CGG | - | chr1_4:30291878-30291897 | Msa0159630:CDS | 50.0% | |
| !!! | TTTAGCCCGCTACTTTTGGC+AGG | + | chr1_4:30291887-30291906 | None:intergenic | 50.0% |
| !! | CCTGTTTAGCCCGCTACTTT+TGG | + | chr1_4:30291891-30291910 | None:intergenic | 50.0% |
| !! | CCAAAAGTAGCGGGCTAAAC+AGG | - | chr1_4:30291888-30291907 | Msa0159630:CDS | 50.0% |
| GAAACTAGGGGTGGCAAAAC+GGG | + | chr1_4:30291932-30291951 | None:intergenic | 50.0% | |
| GGAAACTAGGGGTGGCAAAA+CGG | + | chr1_4:30291933-30291952 | None:intergenic | 50.0% | |
| TTTGCCACCCCTAGTTTCCA+AGG | - | chr1_4:30291934-30291953 | Msa0159630:CDS | 50.0% | |
| ! | CAGTGCAACCTTTTCGTCCT+TGG | + | chr1_4:30291954-30291973 | None:intergenic | 50.0% |
| CAAGGACGAAAAGGTTGCAC+TGG | - | chr1_4:30291952-30291971 | Msa0159630:CDS | 50.0% | |
| CTCCAGACAAAACGTGTCGA+TGG | - | chr1_4:30292043-30292062 | Msa0159630:CDS | 50.0% | |
| ! | CCAGACAAAACGTGTCGATG+GGG | - | chr1_4:30292045-30292064 | Msa0159630:CDS | 50.0% |
| ! | AAAACGTGTCGATGGGGTTG+AGG | - | chr1_4:30292051-30292070 | Msa0159630:CDS | 50.0% |
| ! | TTGAGGCAAGTTGGGAGTGT+GGG | - | chr1_4:30292068-30292087 | Msa0159630:intron | 50.0% |
| GAAGTTCAGGGAGTTCACGA+AGG | - | chr1_4:30292103-30292122 | Msa0159630:intron | 50.0% | |
| ACGAAGGAAGCCTTCATGTG+TGG | - | chr1_4:30292119-30292138 | Msa0159630:intron | 50.0% | |
| CGAAGGAAGCCTTCATGTGT+GGG | - | chr1_4:30292120-30292139 | Msa0159630:intron | 50.0% | |
| AGCCTTCATGTGTGGGATGA+AGG | - | chr1_4:30292127-30292146 | Msa0159630:intron | 50.0% | |
| !! | CGAACTTTCTGGGGTGACAA+CGG | - | chr1_4:30292183-30292202 | Msa0159630:intron | 50.0% |
| ACAACGGCATCTGTTGTGAG+AGG | - | chr1_4:30292199-30292218 | Msa0159630:intron | 50.0% | |
| ! | AGCAGAGAATGGTATTGGGG+AGG | - | chr1_4:30292287-30292306 | Msa0159630:intron | 50.0% |
| ACTGGCATCCTTGGAAGACT+AGG | - | chr1_4:30292694-30292713 | Msa0159630:intron | 50.0% | |
| GTCAAGTGGATCTGTGAGAC+GGG | - | chr1_4:30292864-30292883 | Msa0159630:intron | 50.0% | |
| ! | GATCTGTGAGACGGGTTTCT+CGG | - | chr1_4:30292872-30292891 | Msa0159630:intron | 50.0% |
| ! | ATCTGTGAGACGGGTTTCTC+GGG | - | chr1_4:30292873-30292892 | Msa0159630:intron | 50.0% |
| CCACCTTGCTTCAACACTGT+TGG | + | chr1_4:30293868-30293887 | None:intergenic | 50.0% | |
| ! | CCAACAGTGTTGAAGCAAGG+TGG | - | chr1_4:30293865-30293884 | Msa0159630:intron | 50.0% |
| GTGGGCAACCGAAAGAAACA+AGG | - | chr1_4:30293884-30293903 | Msa0159630:intron | 50.0% | |
| !! | TCTAGGAGCTTAGCTCTGGT+AGG | + | chr1_4:30294102-30294121 | None:intergenic | 50.0% |
| ! | GGTCTGTTGGTCCAGTTTTC+TGG | + | chr1_4:30294398-30294417 | None:intergenic | 50.0% |
| GACTACGTTGCAAGGTCTGT+TGG | + | chr1_4:30294411-30294430 | None:intergenic | 50.0% | |
| GTCGTTGTGACTACGTTGCA+AGG | + | chr1_4:30294419-30294438 | None:intergenic | 50.0% | |
| AACCTCACACACCTAAGACG+TGG | - | chr1_4:30294511-30294530 | Msa0159630:intron | 50.0% | |
| ACCTCACACACCTAAGACGT+GGG | - | chr1_4:30294512-30294531 | Msa0159630:intron | 50.0% | |
| ATTTGTGGGTCCCACGTCTT+AGG | + | chr1_4:30294525-30294544 | None:intergenic | 50.0% | |
| ATGGCAAACCGGCTGAAGAA+AGG | - | chr1_4:30294583-30294602 | Msa0159630:intron | 50.0% | |
| TGTGAGACATCCTCCAGTGT+TGG | - | chr1_4:30294664-30294683 | Msa0159630:intron | 50.0% | |
| AACTAGGAGAGCCCCTTTGA+TGG | - | chr1_4:30294762-30294781 | Msa0159630:intron | 50.0% | |
| !!! | GAGCCTGGTTTTACCGAACT+TGG | - | chr1_4:30295198-30295217 | Msa0159630:intron | 50.0% |
| TGCACAAGGCAGTAAAGCAG+GGG | + | chr1_4:30295272-30295291 | None:intergenic | 50.0% | |
| GGATAGGCACAACATGGACA+CGG | + | chr1_4:30295648-30295667 | Msa0159640:intron | 50.0% | |
| TGCAACGGATAGGCACAACA+TGG | + | chr1_4:30295654-30295673 | Msa0159640:intron | 50.0% | |
| TCTAGCTACCAACGATGGGT+TGG | - | chr1_4:30296127-30296146 | Msa0159630:intron | 50.0% | |
| GGCCCAAGTCCCTTACTAAT+TGG | + | chr1_4:30296154-30296173 | Msa0159640:intron | 50.0% | |
| ACCCCTGACCACATGCTTAA+GGG | + | chr1_4:30296176-30296195 | Msa0159640:intron | 50.0% | |
| AACCCCTGACCACATGCTTA+AGG | + | chr1_4:30296177-30296196 | Msa0159640:intron | 50.0% | |
| ! | GGAAAGGGTATGGGAAAGGT+CGG | + | chr1_4:30297155-30297174 | Msa0159640:CDS | 50.0% |
| ! | GCTAGGAAAGGGTATGGGAA+AGG | + | chr1_4:30297159-30297178 | Msa0159640:CDS | 50.0% |
| GGGTATAAAAAGAGCAGCCC+AGG | - | chr1_4:30297348-30297367 | Msa0159630:intron | 50.0% | |
| !! | GTATGCAGGAGTTTTGTGCC+TGG | + | chr1_4:30297369-30297388 | None:intergenic | 50.0% |
| TCACGTGACTGAAAGGTCAC+GGG | + | chr1_4:30297481-30297500 | None:intergenic | 50.0% | |
| GTCACGTGACTGAAAGGTCA+CGG | + | chr1_4:30297482-30297501 | None:intergenic | 50.0% | |
| GAGATGGATACTTGGCGCAA+TGG | + | chr1_4:30297515-30297534 | None:intergenic | 50.0% | |
| TGCGCCAAGTATCCATCTCT+TGG | - | chr1_4:30297516-30297535 | Msa0159630:intron | 50.0% | |
| TGCTCAGCAGCATAGCAAGA+TGG | + | chr1_4:30297991-30298010 | None:intergenic | 50.0% | |
| TGGGTCGTCGCTGAATACTA+GGG | - | chr1_4:30298086-30298105 | Msa0159630:intron | 50.0% | |
| AGATGTCTGCTCGTGGCAAT+AGG | - | chr1_4:30298124-30298143 | Msa0159630:intron | 50.0% | |
| AATCTGCCCCAAAACTCCGA+AGG | + | chr1_4:30298394-30298413 | None:intergenic | 50.0% | |
| CTGTCAGATCTGAAAGGCTG+AGG | + | chr1_4:30298425-30298444 | None:intergenic | 50.0% | |
| ! | TATCCAAGGTGTCCCTACCT+GGG | - | chr1_4:30298687-30298706 | Msa0159630:intron | 50.0% |
| CTCAAGGTTGGACAGGAAAG+AGG | + | chr1_4:30298766-30298785 | None:intergenic | 50.0% | |
| CTTTCCTGTCCAACCTTGAG+AGG | - | chr1_4:30298766-30298785 | Msa0159630:intron | 50.0% | |
| TCTTCCTCTCAAGGTTGGAC+AGG | + | chr1_4:30298773-30298792 | None:intergenic | 50.0% | |
| !!! | AGCTTTTCTTTGGCCTTGGC+AGG | + | chr1_4:30298971-30298990 | None:intergenic | 50.0% |
| ACACACGTTCACCGAAGAGT+TGG | + | chr1_4:30299155-30299174 | None:intergenic | 50.0% | |
| AGAGCGAGAGTCGAAGAGAG+AGG | + | chr1_4:30290819-30290838 | None:intergenic | 55.0% | |
| GGGTCCTTCTCCTTCCTCTA+TGG | + | chr1_4:30291351-30291370 | None:intergenic | 55.0% | |
| AAAGGCAAAGAGGGTGGGAG+AGG | - | chr1_4:30291382-30291401 | Msa0159630:intron | 55.0% | |
| AGGGCAAGTCTAAACGGGGA+AGG | + | chr1_4:30291525-30291544 | None:intergenic | 55.0% | |
| CGGCTCGTCTTGTGTTTAGC+GGG | + | chr1_4:30291555-30291574 | None:intergenic | 55.0% | |
| TCGTCAGTCCACCACTAAGC+GGG | + | chr1_4:30291616-30291635 | None:intergenic | 55.0% | |
| CTCGTCAGTCCACCACTAAG+CGG | + | chr1_4:30291617-30291636 | None:intergenic | 55.0% | |
| TTTCAGCGAGTTAAGCGGGG+CGG | - | chr1_4:30291824-30291843 | Msa0159630:intron | 55.0% | |
| CTCAGCCTGCCAAAAGTAGC+GGG | - | chr1_4:30291879-30291898 | Msa0159630:CDS | 55.0% | |
| !! | AAGTAGCGGGCTAAACAGGC+CGG | - | chr1_4:30291892-30291911 | Msa0159630:CDS | 55.0% |
| CAAAACGGGCCCAACCCATT+GGG | + | chr1_4:30291918-30291937 | None:intergenic | 55.0% | |
| TCGTCCTTGGAAACTAGGGG+TGG | + | chr1_4:30291941-30291960 | None:intergenic | 55.0% | |
| ! | CCCCATCGACACGTTTTGTC+TGG | + | chr1_4:30292048-30292067 | None:intergenic | 55.0% |
| TCGATGGGGTTGAGGCAAGT+TGG | - | chr1_4:30292059-30292078 | Msa0159630:intron | 55.0% | |
| CGATGGGGTTGAGGCAAGTT+GGG | - | chr1_4:30292060-30292079 | Msa0159630:intron | 55.0% | |
| ! | GTTGAGGCAAGTTGGGAGTG+TGG | - | chr1_4:30292067-30292086 | Msa0159630:intron | 55.0% |
| ! | TGAGGCAAGTTGGGAGTGTG+GGG | - | chr1_4:30292069-30292088 | Msa0159630:intron | 55.0% |
| GCTGTACTGCTCTGCTGTTG+AGG | - | chr1_4:30292403-30292422 | Msa0159630:intron | 55.0% | |
| CTGGTCTAGGAGCTTAGCTC+TGG | + | chr1_4:30294106-30294125 | None:intergenic | 55.0% | |
| TCCCACGTCTTAGGTGTGTG+AGG | + | chr1_4:30294516-30294535 | None:intergenic | 55.0% | |
| GCAAACCGGCTGAAGAAAGG+CGG | - | chr1_4:30294586-30294605 | Msa0159630:intron | 55.0% | |
| !! | ATCCTCCAGTGTTGGCGCTT+AGG | - | chr1_4:30294672-30294691 | Msa0159630:intron | 55.0% |
| !! | TCCTCCAGTGTTGGCGCTTA+GGG | - | chr1_4:30294673-30294692 | Msa0159630:intron | 55.0% |
| ACTTGGGCCCCTTAAGCATG+TGG | - | chr1_4:30296165-30296184 | Msa0159630:intron | 55.0% | |
| GCCCCTTAAGCATGTGGTCA+GGG | - | chr1_4:30296171-30296190 | Msa0159630:intron | 55.0% | |
| CCCCTGACCACATGCTTAAG+GGG | + | chr1_4:30296175-30296194 | Msa0159640:intron | 55.0% | |
| CCCCTTAAGCATGTGGTCAG+GGG | - | chr1_4:30296172-30296191 | Msa0159630:intron | 55.0% | |
| TAATCTCCGTCGCACCTGTG+GGG | + | chr1_4:30296224-30296243 | Msa0159640:intron | 55.0% | |
| CTAATCTCCGTCGCACCTGT+GGG | + | chr1_4:30296225-30296244 | Msa0159640:intron | 55.0% | |
| ACTAATCTCCGTCGCACCTG+TGG | + | chr1_4:30296226-30296245 | Msa0159640:intron | 55.0% | |
| TAGTCACTGCTAAGCGGCAG+TGG | - | chr1_4:30296242-30296261 | Msa0159630:intron | 55.0% | |
| ACTCCTGCATACGCAAGGTC+CGG | - | chr1_4:30297377-30297396 | Msa0159630:intron | 55.0% | |
| ! | CAAATGGTGGAACCCCTTCC+CGG | + | chr1_4:30297399-30297418 | None:intergenic | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1_4:30297469-30297488 | None:intergenic | 55.0% | |
| !! | TTCTGGCTTCACAGCTGCAC+TGG | + | chr1_4:30298016-30298035 | None:intergenic | 55.0% |
| GTGGGTCGTCGCTGAATACT+AGG | - | chr1_4:30298085-30298104 | Msa0159630:intron | 55.0% | |
| TTGGCTCAGATGTCTGCTCG+TGG | - | chr1_4:30298117-30298136 | Msa0159630:intron | 55.0% | |
| GGAGGGCTACCTGAATATCC+AGG | + | chr1_4:30298237-30298256 | None:intergenic | 55.0% | |
| TGGTCCTGATGGCACTGTCT+TGG | - | chr1_4:30298266-30298285 | Msa0159630:intron | 55.0% | |
| GCTTCCAAGACAGTGCCATC+AGG | + | chr1_4:30298273-30298292 | None:intergenic | 55.0% | |
| ! | CTATCCAAGGTGTCCCTACC+TGG | - | chr1_4:30298686-30298705 | Msa0159630:intron | 55.0% |
| CGTCAGTCCACCACTAAGCG+GGG | + | chr1_4:30291615-30291634 | None:intergenic | 60.0% | |
| ! | GGACTGACGAGTTGACGAGC+CGG | - | chr1_4:30291626-30291645 | Msa0159630:CDS | 60.0% |
| GCTGAAAAAACGGAGCGGGC+CGG | + | chr1_4:30291811-30291830 | None:intergenic | 60.0% | |
| TTCAGCGAGTTAAGCGGGGC+GGG | - | chr1_4:30291825-30291844 | Msa0159630:intron | 60.0% | |
| GCTAAACAGGCCGGCCCAAT+GGG | - | chr1_4:30291901-30291920 | Msa0159630:CDS | 60.0% | |
| GCAAAACGGGCCCAACCCAT+TGG | + | chr1_4:30291919-30291938 | None:intergenic | 60.0% | |
| ! | GAGGCAAGTTGGGAGTGTGG+GGG | - | chr1_4:30292070-30292089 | Msa0159630:intron | 60.0% |
| CCACACCGCCTTTCTTCAGC+CGG | + | chr1_4:30294594-30294613 | None:intergenic | 60.0% | |
| CGGCTGAAGAAAGGCGGTGT+GGG | - | chr1_4:30294592-30294611 | Msa0159630:intron | 60.0% | |
| TGCCTGTCTCGCCAGCATGT+GGG | + | chr1_4:30294621-30294640 | None:intergenic | 60.0% | |
| CATGCCCTAAGCGCCAACAC+TGG | + | chr1_4:30294680-30294699 | None:intergenic | 60.0% | |
| !! | CAGTGTTGGCGCTTAGGGCA+TGG | - | chr1_4:30294678-30294697 | Msa0159630:intron | 60.0% |
| GGCCCCTTAAGCATGTGGTC+AGG | - | chr1_4:30296170-30296189 | Msa0159630:intron | 60.0% | |
| ACCTGTGGGGCACACAAGGT+GGG | + | chr1_4:30296211-30296230 | Msa0159640:intron | 60.0% | |
| GGGTATGGGAAAGGTCGGCT+GGG | + | chr1_4:30297150-30297169 | Msa0159640:CDS | 60.0% | |
| AGGGTATGGGAAAGGTCGGC+TGG | + | chr1_4:30297151-30297170 | Msa0159640:CDS | 60.0% | |
| CTCCTGCATACGCAAGGTCC+GGG | - | chr1_4:30297378-30297397 | Msa0159630:intron | 60.0% | |
| TTCCCGGACCTTGCGTATGC+AGG | + | chr1_4:30297383-30297402 | None:intergenic | 60.0% | |
| TGCATACGCAAGGTCCGGGA+AGG | - | chr1_4:30297382-30297401 | Msa0159630:intron | 60.0% | |
| GCATACGCAAGGTCCGGGAA+GGG | - | chr1_4:30297383-30297402 | Msa0159630:intron | 60.0% | |
| CATACGCAAGGTCCGGGAAG+GGG | - | chr1_4:30297384-30297403 | Msa0159630:intron | 60.0% | |
| CGGGAAGGGGTTCCACCATT+TGG | - | chr1_4:30297397-30297416 | Msa0159630:intron | 60.0% | |
| GTACCCAGGTAGGGACACCT+TGG | + | chr1_4:30298693-30298712 | None:intergenic | 60.0% | |
| ACCACTAAGCGGGGCAGGGT+GGG | + | chr1_4:30291606-30291625 | None:intergenic | 65.0% | |
| GTCCACCACTAAGCGGGGCA+GGG | + | chr1_4:30291610-30291629 | None:intergenic | 65.0% | |
| AGTCCACCACTAAGCGGGGC+AGG | + | chr1_4:30291611-30291630 | None:intergenic | 65.0% | |
| GGCTAAACAGGCCGGCCCAA+TGG | - | chr1_4:30291900-30291919 | Msa0159630:CDS | 65.0% | |
| AACAGGCCGGCCCAATGGGT+TGG | - | chr1_4:30291905-30291924 | Msa0159630:CDS | 65.0% | |
| ! | ACAGGCCGGCCCAATGGGTT+GGG | - | chr1_4:30291906-30291925 | Msa0159630:CDS | 65.0% |
| CCGGCTGAAGAAAGGCGGTG+TGG | - | chr1_4:30294591-30294610 | Msa0159630:intron | 65.0% | |
| GGTGTGGGAACCCCACATGC+TGG | - | chr1_4:30294607-30294626 | Msa0159630:intron | 65.0% | |
| ACCCCACATGCTGGCGAGAC+AGG | - | chr1_4:30294616-30294635 | Msa0159630:intron | 65.0% | |
| GCCTGTCTCGCCAGCATGTG+GGG | + | chr1_4:30294620-30294639 | None:intergenic | 65.0% | |
| GTGCCTGTCTCGCCAGCATG+TGG | + | chr1_4:30294622-30294641 | None:intergenic | 65.0% | |
| GCCCTAAGCGCCAACACTGG+AGG | + | chr1_4:30294677-30294696 | None:intergenic | 65.0% | |
| GCGCTTAGGGCATGGCCGAT+TGG | - | chr1_4:30294686-30294705 | Msa0159630:intron | 65.0% | |
| ! | GGGGCACACAAGGTGGGTTC+AGG | + | chr1_4:30296205-30296224 | Msa0159640:intron | 65.0% |
| ACCCACCTTGTGTGCCCCAC+AGG | - | chr1_4:30296207-30296226 | Msa0159630:intron | 65.0% | |
| CACCTGTGGGGCACACAAGG+TGG | + | chr1_4:30296212-30296231 | Msa0159640:intron | 65.0% | |
| TCGCACCTGTGGGGCACACA+AGG | + | chr1_4:30296215-30296234 | Msa0159640:intron | 65.0% | |
| TGTGTGCCCCACAGGTGCGA+CGG | - | chr1_4:30296215-30296234 | Msa0159630:intron | 65.0% | |
| TCCCACCCTGCCCCGCTTAG+TGG | - | chr1_4:30291602-30291621 | Msa0159630:CDS | 70.0% | |
| CACCACTAAGCGGGGCAGGG+TGG | + | chr1_4:30291607-30291626 | None:intergenic | 70.0% | |
| CACCCTGCCCCGCTTAGTGG+TGG | - | chr1_4:30291605-30291624 | Msa0159630:CDS | 70.0% | |
| AAGCGGGGCGGGCCAAGTAG+AGG | - | chr1_4:30291836-30291855 | Msa0159630:intron | 70.0% | |
| AGCGGGGCGGGCCAAGTAGA+GGG | - | chr1_4:30291837-30291856 | Msa0159630:intron | 70.0% | |
| ACGGGCCCAACCCATTGGGC+CGG | + | chr1_4:30291914-30291933 | None:intergenic | 70.0% | |
| CACGCGCGCACGCACCTGAG+AGG | + | chr1_4:30290848-30290867 | None:intergenic | 75.0% | |
| GCGGGGCGGGCCAAGTAGAG+GGG | - | chr1_4:30291838-30291857 | Msa0159630:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 30290588 | 30299466 | 30290588 | ID=Msa0159630;Name=Msa0159630 |
| chr1_4 | mRNA | 30290588 | 30299466 | 30290588 | ID=Msa0159630-mRNA-1;Parent=Msa0159630;Name=Msa0159630-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.42|0.37|0.87|0.14|0|8|378|279 |
| chr1_4 | exon | 30290588 | 30290970 | 30290588 | ID=Msa0159630-mRNA-1:exon:9791;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30291307 | 30291381 | 30291307 | ID=Msa0159630-mRNA-1:exon:9790;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30291589 | 30291807 | 30291589 | ID=Msa0159630-mRNA-1:exon:9789;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30291862 | 30292077 | 30291862 | ID=Msa0159630-mRNA-1:exon:9788;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30293077 | 30293238 | 30293077 | ID=Msa0159630-mRNA-1:exon:9787;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30294832 | 30294940 | 30294832 | ID=Msa0159630-mRNA-1:exon:9786;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30297145 | 30297194 | 30297145 | ID=Msa0159630-mRNA-1:exon:9785;Parent=Msa0159630-mRNA-1 |
| chr1_4 | exon | 30299463 | 30299466 | 30299463 | ID=Msa0159630-mRNA-1:exon:9784;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30299463 | 30299466 | 30299463 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30297145 | 30297194 | 30297145 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30294832 | 30294940 | 30294832 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30293077 | 30293238 | 30293077 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30291862 | 30292077 | 30291862 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30291589 | 30291807 | 30291589 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30291307 | 30291381 | 30291307 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | CDS | 30290966 | 30290970 | 30290966 | ID=Msa0159630-mRNA-1:cds;Parent=Msa0159630-mRNA-1 |
| chr1_4 | three_prime_UTR | 30290588 | 30290965 | 30290588 | ID=Msa0159630-mRNA-1:three_prime_utr;Parent=Msa0159630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
