AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0160820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0160820 MtrunA17_Chr1g0173421 97.552 286 7 0 1 286 1 286 0.0 581
Msa0160820 MtrunA17_Chr7g0257681 65.157 287 79 2 1 285 1 268 3.96e-129 367
Msa0160820 MtrunA17_Chr6g0451591 49.640 139 63 2 2 137 50 184 3.40e-38 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0160820 AT2G41835.1 62.718 287 97 3 1 286 1 278 4.72e-128 365
Msa0160820 AT3G57480.2 53.310 287 96 2 1 287 1 249 2.13e-106 310
Msa0160820 AT3G57480.1 53.310 287 96 2 1 287 1 249 2.13e-106 310
Msa0160820 AT3G28210.2 41.622 185 78 4 2 183 5 162 2.28e-38 134
Msa0160820 AT3G28210.1 41.622 185 78 4 2 183 5 162 2.28e-38 134
Msa0160820 AT5G48205.1 40.260 154 33 4 1 151 1 98 3.12e-25 99.8

Find 77 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTCTTCTTGTTCTTCT+TGG 0.051744 1_4:-34267445 Msa0160820:five_prime_UTR
TTTCCTAGATCTGGAAATTC+TGG 0.237504 1_4:+34267412 None:intergenic
CTATTCATTAGATTCATAAA+AGG 0.242926 1_4:+34265869 None:intergenic
CTTCTTGTTCTTCTTGGAAT+GGG 0.278833 1_4:-34267439 Msa0160820:exon
CAACCTCCTCTTCATCTAAA+TGG 0.298522 1_4:-34265811 Msa0160820:CDS
TGATTCTCCCATGTTATGTT+TGG 0.324605 1_4:+34266088 None:intergenic
GCTGGATGAATTTATAAAAC+TGG 0.330536 1_4:+34265345 None:intergenic
AGAAATTGTACTTTCTGAAA+TGG 0.333254 1_4:-34265412 Msa0160820:three_prime_UTR
TCTTCTTGTTCTTCTTGGAA+TGG 0.361452 1_4:-34267440 Msa0160820:exon
GTAACTTTCTCATAATTTGA+TGG 0.361749 1_4:+34266046 None:intergenic
TTCATATCTTGTTTATATGC+TGG 0.371823 1_4:+34265327 None:intergenic
CGCTTCTAATATTCGAGCTT+CGG 0.377494 1_4:-34265768 Msa0160820:CDS
ATCTCTTTGCATCCAGCTGC+AGG 0.399699 1_4:+34266007 None:intergenic
GGTCCTGGACATTTGTGATC+AGG 0.415571 1_4:+34265914 None:intergenic
ATATGTCCACTTTGCGCTAA+AGG 0.436581 1_4:-34266136 Msa0160820:CDS
TTGGATCTTGCTCAGGAACT+AGG 0.441768 1_4:+34266107 None:intergenic
CACTTGCGATCGCTGCTACC+AGG 0.446006 1_4:-34267344 Msa0160820:intron
TATTCATTAGATTCATAAAA+GGG 0.454261 1_4:+34265870 None:intergenic
ATTCGAGCTTCGGCTGAGGC+TGG 0.454635 1_4:-34265758 Msa0160820:CDS
GTTATGTTTGGATCTTGCTC+AGG 0.458286 1_4:+34266100 None:intergenic
TAGACCATTGTTTGAAGCAT+AGG 0.461011 1_4:-34265943 Msa0160820:CDS
AGTAGTGATCGAGGAAAACT+TGG 0.461509 1_4:+34265628 None:intergenic
AGAGGAGGTTGAACTTGAGT+TGG 0.472577 1_4:+34265823 None:intergenic
CATATAAACAAGATATGAAA+AGG 0.474922 1_4:-34265323 Msa0160820:three_prime_UTR
ACTCCAGAATTTCCAGATCT+AGG 0.478228 1_4:-34267415 Msa0160820:CDS
TAACTTTCTCATAATTTGAT+GGG 0.483060 1_4:+34266047 None:intergenic
GTGGTGAAATTAACCAAGCC+TGG 0.484928 1_4:-34265721 Msa0160820:CDS
TATGCTGGATGAATTTATCC+AGG 0.493035 1_4:+34265383 None:intergenic
CATTGTTTGAAGCATAGGTT+TGG 0.498039 1_4:-34265938 Msa0160820:CDS
AAAACTTGGCACCGCATTGA+GGG 0.499599 1_4:+34265642 None:intergenic
TTCTTGTTCTTCTTGGAATG+GGG 0.506109 1_4:-34267438 Msa0160820:exon
TGTAGTCCATTTAGATGAAG+AGG 0.514775 1_4:+34265805 None:intergenic
GAAATCAACGAGCTTGCAAT+CGG 0.515709 1_4:+34267375 None:intergenic
AGGTGTATTGTTTGGAACAC+CGG 0.516965 1_4:-34266213 Msa0160820:CDS
CTCAAACACAATTAAATGCA+AGG 0.517875 1_4:-34265975 Msa0160820:CDS
CACAGATCCCGTGTCCCTTG+TGG 0.520415 1_4:-34265510 Msa0160820:CDS
TTTCTGAAATGGATAGTGCC+TGG 0.522098 1_4:-34265401 Msa0160820:three_prime_UTR
ATTTCTGTCTACGTTGCCGT+TGG 0.526523 1_4:-34265274 Msa0160820:three_prime_UTR
GCGTGTCCTAAGTGTAGTAA+AGG 0.526636 1_4:-34265536 Msa0160820:CDS
CCCTCTCAACATGCTCCACA+AGG 0.529390 1_4:+34265495 None:intergenic
GTGAATCCTTTACTACACTT+AGG 0.538962 1_4:+34265530 None:intergenic
ACACTTAGGACACGCATCAA+TGG 0.539521 1_4:+34265544 None:intergenic
GGTCCTGATCACAAATGTCC+AGG 0.548572 1_4:-34265917 Msa0160820:CDS
AGAGACAAATGTTTATATGC+TGG 0.548816 1_4:+34265368 None:intergenic
GAAAACTTGGCACCGCATTG+AGG 0.550498 1_4:+34265641 None:intergenic
TGGTGAAATTAACCAAGCCT+GGG 0.551641 1_4:-34265720 Msa0160820:CDS
AGCAAGATCCAAACATAACA+TGG 0.557990 1_4:-34266096 Msa0160820:CDS
TAATATTCGAGCTTCGGCTG+AGG 0.559139 1_4:-34265762 Msa0160820:CDS
GTGAGAAAGAGCAACGGCAG+TGG 0.567326 1_4:-34265680 Msa0160820:CDS
CAAACCTATGCTTCAAACAA+TGG 0.573057 1_4:+34265939 None:intergenic
AACATGCTCCACAAGGGACA+CGG 0.573079 1_4:+34265502 None:intergenic
GAGCAACGGCAGTGGTCAAG+TGG 0.573351 1_4:-34265672 Msa0160820:CDS
TGGTGGCACTTCTAGAACAT+AGG 0.575559 1_4:-34265468 Msa0160820:exon
TAGCAGCGATCGCAAGTGAA+AGG 0.598354 1_4:+34267349 None:intergenic
CGACTCGGAAATTTATATTG+CGG 0.602513 1_4:-34267520 None:intergenic
ACATGCTCCACAAGGGACAC+GGG 0.604172 1_4:+34265503 None:intergenic
TGGTAACATTCGCAACAGAT+CGG 0.605303 1_4:+34265564 None:intergenic
CGGACTCCTTTAGCGCAAAG+TGG 0.607339 1_4:+34266130 None:intergenic
ACCGATGTTTGATATAACTC+CGG 0.608595 1_4:+34266194 None:intergenic
ATAATTTGATGGGTCGCAGT+CGG 0.619214 1_4:+34266057 None:intergenic
AGTCCATTTAGATGAAGAGG+AGG 0.622955 1_4:+34265808 None:intergenic
TCTCTTTGCATCCAGCTGCA+GGG 0.624481 1_4:+34266008 None:intergenic
GAGCATGTTGAGAGGGAACA+TGG 0.625868 1_4:-34265488 Msa0160820:CDS
CCCTTGTGGAGCATGTTGAG+AGG 0.626858 1_4:-34265496 Msa0160820:CDS
ATCGATTAAAGTAGTGATCG+AGG 0.631399 1_4:+34265619 None:intergenic
CGAAGCTCGAATATTAGAAG+CGG 0.637300 1_4:+34265769 None:intergenic
CCTTGTGGAGCATGTTGAGA+GGG 0.637426 1_4:-34265495 Msa0160820:CDS
GCAAGATCCAAACATAACAT+GGG 0.676319 1_4:-34266095 Msa0160820:CDS
ACCGGAGTTATATCAAACAT+CGG 0.687208 1_4:-34266195 Msa0160820:CDS
CCTCTCAACATGCTCCACAA+GGG 0.702395 1_4:+34265496 None:intergenic
GGTGAAATTAACCAAGCCTG+GGG 0.712063 1_4:-34265719 Msa0160820:CDS
AATGGTGTGAGAAAGAGCAA+CGG 0.713166 1_4:-34265686 Msa0160820:CDS
GATCTTGCTCAGGAACTAGG+CGG 0.720155 1_4:+34266110 None:intergenic
GCTGGAATGTCAAAGTTGAG+TGG 0.723894 1_4:-34265740 Msa0160820:CDS
GTGAAATTAACCAAGCCTGG+GGG 0.745657 1_4:-34265718 Msa0160820:CDS
GTGGAGCAATGCCCTCAATG+CGG 0.747142 1_4:-34265653 Msa0160820:CDS
CATGTTGAGAGGGAACATGG+TGG 0.749762 1_4:-34265485 Msa0160820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCATATAAGCTATTTTTT+GGG + chr1_4:34265717-34265736 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_4:34265718-34265737 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_4:34266122-34266141 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_4:34266123-34266142 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_4:34266391-34266410 Msa0160820:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_4:34266912-34266931 None:intergenic 15.0%
!!! AATCATATAAGCTATTTTTT+GGG + chr1_4:34265717-34265736 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_4:34265718-34265737 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_4:34266122-34266141 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_4:34266123-34266142 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_4:34266391-34266410 Msa0160820:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_4:34266912-34266931 None:intergenic 15.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_4:34265471-34265490 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_4:34265538-34265557 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_4:34265539-34265558 None:intergenic 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_4:34265716-34265735 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_4:34266005-34266024 Msa0160820:CDS 20.0%
!! CAAATGGTTTATCAAAATTA+CGG - chr1_4:34266256-34266275 Msa0160820:intron 20.0%
!! ATCATAAGTAAAAACATTGT+TGG + chr1_4:34266429-34266448 None:intergenic 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_4:34266735-34266754 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_4:34266889-34266908 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_4:34266913-34266932 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_4:34266911-34266930 Msa0160820:intron 20.0%
!! CATATAAACAAGATATGAAA+AGG - chr1_4:34267456-34267475 Msa0160820:five_prime_UTR 20.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_4:34265471-34265490 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_4:34265538-34265557 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_4:34265539-34265558 None:intergenic 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_4:34265716-34265735 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_4:34266005-34266024 Msa0160820:CDS 20.0%
!! CAAATGGTTTATCAAAATTA+CGG - chr1_4:34266256-34266275 Msa0160820:intron 20.0%
!! ATCATAAGTAAAAACATTGT+TGG + chr1_4:34266429-34266448 None:intergenic 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_4:34266735-34266754 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_4:34266889-34266908 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_4:34266913-34266932 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_4:34266911-34266930 Msa0160820:intron 20.0%
!! CATATAAACAAGATATGAAA+AGG - chr1_4:34267456-34267475 Msa0160820:five_prime_UTR 20.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_4:34265512-34265531 None:intergenic 25.0%
!!! CATCTAATTGAAAGTACTTT+TGG - chr1_4:34265567-34265586 Msa0160820:CDS 25.0%
!! TTTTGGCCTAGATTTTATTA+GGG - chr1_4:34265584-34265603 Msa0160820:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_4:34265591-34265610 Msa0160820:CDS 25.0%
!!! CTTTATTTGGATTTTATCTC+AGG - chr1_4:34265654-34265673 Msa0160820:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_4:34265735-34265754 Msa0160820:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_4:34265810-34265829 Msa0160820:CDS 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_4:34265890-34265909 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_4:34265945-34265964 Msa0160820:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_4:34266010-34266029 Msa0160820:CDS 25.0%
! AAACTATCATGTGAACAAAT+TGG - chr1_4:34266141-34266160 Msa0160820:CDS 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_4:34266357-34266376 Msa0160820:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_4:34266361-34266380 None:intergenic 25.0%
!!! GTATTTTTATTTTTGAGGTG+TGG - chr1_4:34266396-34266415 Msa0160820:intron 25.0%
!!! ATTTTGTTTGATGACATTCT+TGG - chr1_4:34266447-34266466 Msa0160820:intron 25.0%
!!! TTTTGTTTGATGACATTCTT+GGG - chr1_4:34266448-34266467 Msa0160820:intron 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_4:34266736-34266755 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_4:34266924-34266943 Msa0160820:intron 25.0%
!! AGAAATTGTACTTTCTGAAA+TGG - chr1_4:34267367-34267386 Msa0160820:CDS 25.0%
!! TTCATATCTTGTTTATATGC+TGG + chr1_4:34267455-34267474 None:intergenic 25.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_4:34265512-34265531 None:intergenic 25.0%
!!! CATCTAATTGAAAGTACTTT+TGG - chr1_4:34265567-34265586 Msa0160820:CDS 25.0%
!! TTTTGGCCTAGATTTTATTA+GGG - chr1_4:34265584-34265603 Msa0160820:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_4:34265591-34265610 Msa0160820:CDS 25.0%
!!! CTTTATTTGGATTTTATCTC+AGG - chr1_4:34265654-34265673 Msa0160820:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_4:34265735-34265754 Msa0160820:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_4:34265810-34265829 Msa0160820:CDS 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_4:34265890-34265909 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_4:34265945-34265964 Msa0160820:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_4:34266010-34266029 Msa0160820:CDS 25.0%
! AAACTATCATGTGAACAAAT+TGG - chr1_4:34266141-34266160 Msa0160820:CDS 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_4:34266357-34266376 Msa0160820:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_4:34266361-34266380 None:intergenic 25.0%
!!! GTATTTTTATTTTTGAGGTG+TGG - chr1_4:34266396-34266415 Msa0160820:intron 25.0%
!!! ATTTTGTTTGATGACATTCT+TGG - chr1_4:34266447-34266466 Msa0160820:intron 25.0%
!!! TTTTGTTTGATGACATTCTT+GGG - chr1_4:34266448-34266467 Msa0160820:intron 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_4:34266736-34266755 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_4:34266924-34266943 Msa0160820:intron 25.0%
!! AGAAATTGTACTTTCTGAAA+TGG - chr1_4:34267367-34267386 Msa0160820:CDS 25.0%
!! TTCATATCTTGTTTATATGC+TGG + chr1_4:34267455-34267474 None:intergenic 25.0%
! CTTTTGGCCTAGATTTTATT+AGG - chr1_4:34265583-34265602 Msa0160820:CDS 30.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_4:34265593-34265612 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_4:34265590-34265609 Msa0160820:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_4:34265598-34265617 Msa0160820:CDS 30.0%
AAATCGAAACTACCGTTAAA+TGG + chr1_4:34265627-34265646 None:intergenic 30.0%
! CGATTTTCGAAGACTTTATT+TGG - chr1_4:34265641-34265660 Msa0160820:CDS 30.0%
TATAGCTTTCTCAAAAGTCA+CGG + chr1_4:34265794-34265813 None:intergenic 30.0%
TATCATGTGAACAAATTGGA+AGG - chr1_4:34266145-34266164 Msa0160820:CDS 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_4:34266194-34266213 None:intergenic 30.0%
ATTACGGTATTGCAGAAAAT+AGG - chr1_4:34266272-34266291 Msa0160820:intron 30.0%
TTACGGTATTGCAGAAAATA+GGG - chr1_4:34266273-34266292 Msa0160820:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_4:34266561-34266580 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_4:34266562-34266581 None:intergenic 30.0%
CTCAAACACAATTAAATGCA+AGG - chr1_4:34266804-34266823 Msa0160820:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_4:34267189-34267208 Msa0160820:intron 30.0%
AGAGACAAATGTTTATATGC+TGG + chr1_4:34267414-34267433 None:intergenic 30.0%
GCTGGATGAATTTATAAAAC+TGG + chr1_4:34267437-34267456 None:intergenic 30.0%
! CTTTTGGCCTAGATTTTATT+AGG - chr1_4:34265583-34265602 Msa0160820:CDS 30.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_4:34265593-34265612 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_4:34265590-34265609 Msa0160820:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_4:34265598-34265617 Msa0160820:CDS 30.0%
AAATCGAAACTACCGTTAAA+TGG + chr1_4:34265627-34265646 None:intergenic 30.0%
! CGATTTTCGAAGACTTTATT+TGG - chr1_4:34265641-34265660 Msa0160820:CDS 30.0%
TATAGCTTTCTCAAAAGTCA+CGG + chr1_4:34265794-34265813 None:intergenic 30.0%
TATCATGTGAACAAATTGGA+AGG - chr1_4:34266145-34266164 Msa0160820:CDS 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_4:34266194-34266213 None:intergenic 30.0%
ATTACGGTATTGCAGAAAAT+AGG - chr1_4:34266272-34266291 Msa0160820:intron 30.0%
TTACGGTATTGCAGAAAATA+GGG - chr1_4:34266273-34266292 Msa0160820:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_4:34266561-34266580 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_4:34266562-34266581 None:intergenic 30.0%
CTCAAACACAATTAAATGCA+AGG - chr1_4:34266804-34266823 Msa0160820:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_4:34267189-34267208 Msa0160820:intron 30.0%
AGAGACAAATGTTTATATGC+TGG + chr1_4:34267414-34267433 None:intergenic 30.0%
GCTGGATGAATTTATAAAAC+TGG + chr1_4:34267437-34267456 None:intergenic 30.0%
! GAGTGAGTCAAGAATTTTTG+AGG - chr1_4:34265281-34265300 Msa0160820:three_prime_UTR 35.0%
CTTGTTCTTCTTGTTCTTCT+TGG - chr1_4:34265334-34265353 Msa0160820:three_prime_UTR 35.0%
TCTTCTTGTTCTTCTTGGAA+TGG - chr1_4:34265339-34265358 Msa0160820:three_prime_UTR 35.0%
CTTCTTGTTCTTCTTGGAAT+GGG - chr1_4:34265340-34265359 Msa0160820:three_prime_UTR 35.0%
TTCTTGTTCTTCTTGGAATG+GGG - chr1_4:34265341-34265360 Msa0160820:three_prime_UTR 35.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_4:34265370-34265389 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+CGG - chr1_4:34265612-34265631 Msa0160820:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_4:34265854-34265873 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_4:34265857-34265876 Msa0160820:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_4:34266015-34266034 Msa0160820:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_4:34266021-34266040 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_4:34266078-34266097 None:intergenic 35.0%
CTACAGCTACAATGCTATAA+CGG - chr1_4:34266225-34266244 Msa0160820:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_4:34266546-34266565 Msa0160820:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_4:34266556-34266575 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_4:34266558-34266577 Msa0160820:intron 35.0%
ACCGGAGTTATATCAAACAT+CGG - chr1_4:34266584-34266603 Msa0160820:intron 35.0%
ACCGATGTTTGATATAACTC+CGG + chr1_4:34266588-34266607 None:intergenic 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_4:34266683-34266702 Msa0160820:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_4:34266684-34266703 Msa0160820:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_4:34266694-34266713 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_4:34266836-34266855 Msa0160820:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_4:34266843-34266862 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_4:34266841-34266860 Msa0160820:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_4:34266977-34266996 None:intergenic 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_4:34267163-34267182 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_4:34267252-34267271 None:intergenic 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_4:34267399-34267418 None:intergenic 35.0%
! GAGTGAGTCAAGAATTTTTG+AGG - chr1_4:34265281-34265300 Msa0160820:three_prime_UTR 35.0%
CTTGTTCTTCTTGTTCTTCT+TGG - chr1_4:34265334-34265353 Msa0160820:three_prime_UTR 35.0%
TCTTCTTGTTCTTCTTGGAA+TGG - chr1_4:34265339-34265358 Msa0160820:three_prime_UTR 35.0%
CTTCTTGTTCTTCTTGGAAT+GGG - chr1_4:34265340-34265359 Msa0160820:three_prime_UTR 35.0%
TTCTTGTTCTTCTTGGAATG+GGG - chr1_4:34265341-34265360 Msa0160820:three_prime_UTR 35.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_4:34265370-34265389 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+CGG - chr1_4:34265612-34265631 Msa0160820:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_4:34265854-34265873 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_4:34265857-34265876 Msa0160820:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_4:34266015-34266034 Msa0160820:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_4:34266021-34266040 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_4:34266078-34266097 None:intergenic 35.0%
CTACAGCTACAATGCTATAA+CGG - chr1_4:34266225-34266244 Msa0160820:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_4:34266546-34266565 Msa0160820:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_4:34266556-34266575 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_4:34266558-34266577 Msa0160820:intron 35.0%
ACCGGAGTTATATCAAACAT+CGG - chr1_4:34266584-34266603 Msa0160820:intron 35.0%
ACCGATGTTTGATATAACTC+CGG + chr1_4:34266588-34266607 None:intergenic 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_4:34266683-34266702 Msa0160820:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_4:34266684-34266703 Msa0160820:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_4:34266694-34266713 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_4:34266836-34266855 Msa0160820:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_4:34266843-34266862 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_4:34266841-34266860 Msa0160820:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_4:34266977-34266996 None:intergenic 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_4:34267163-34267182 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_4:34267252-34267271 None:intergenic 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_4:34267399-34267418 None:intergenic 35.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_4:34265364-34265383 Msa0160820:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_4:34265407-34265426 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_4:34265456-34265475 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_4:34265494-34265513 None:intergenic 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_4:34265768-34265787 Msa0160820:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_4:34265849-34265868 Msa0160820:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_4:34265855-34265874 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_4:34265956-34265975 Msa0160820:CDS 40.0%
TATAACGGTGCAGAGTCAAA+TGG - chr1_4:34266240-34266259 Msa0160820:intron 40.0%
! TCTTGGGAATTTGCGTTTTG+TGG - chr1_4:34266464-34266483 Msa0160820:intron 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_4:34266542-34266561 None:intergenic 40.0%
! AGGTGTATTGTTTGGAACAC+CGG - chr1_4:34266566-34266585 Msa0160820:intron 40.0%
ATATGTCCACTTTGCGCTAA+AGG - chr1_4:34266643-34266662 Msa0160820:intron 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_4:34266682-34266701 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_4:34266725-34266744 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_4:34266876-34266895 Msa0160820:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_4:34266883-34266902 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_4:34266968-34266987 Msa0160820:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_4:34266974-34266993 None:intergenic 40.0%
CGAAGCTCGAATATTAGAAG+CGG + chr1_4:34267013-34267032 None:intergenic 40.0%
CGCTTCTAATATTCGAGCTT+CGG - chr1_4:34267011-34267030 Msa0160820:intron 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_4:34267059-34267078 Msa0160820:intron 40.0%
AATGGTGTGAGAAAGAGCAA+CGG - chr1_4:34267093-34267112 Msa0160820:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_4:34267154-34267173 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_4:34267218-34267237 None:intergenic 40.0%
!! TTTCTGAAATGGATAGTGCC+TGG - chr1_4:34267378-34267397 Msa0160820:CDS 40.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_4:34265364-34265383 Msa0160820:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_4:34265407-34265426 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_4:34265456-34265475 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_4:34265494-34265513 None:intergenic 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_4:34265768-34265787 Msa0160820:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_4:34265849-34265868 Msa0160820:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_4:34265855-34265874 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_4:34265956-34265975 Msa0160820:CDS 40.0%
TATAACGGTGCAGAGTCAAA+TGG - chr1_4:34266240-34266259 Msa0160820:intron 40.0%
! TCTTGGGAATTTGCGTTTTG+TGG - chr1_4:34266464-34266483 Msa0160820:intron 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_4:34266542-34266561 None:intergenic 40.0%
! AGGTGTATTGTTTGGAACAC+CGG - chr1_4:34266566-34266585 Msa0160820:intron 40.0%
ATATGTCCACTTTGCGCTAA+AGG - chr1_4:34266643-34266662 Msa0160820:intron 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_4:34266682-34266701 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_4:34266725-34266744 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_4:34266876-34266895 Msa0160820:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_4:34266883-34266902 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_4:34266968-34266987 Msa0160820:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_4:34266974-34266993 None:intergenic 40.0%
CGAAGCTCGAATATTAGAAG+CGG + chr1_4:34267013-34267032 None:intergenic 40.0%
CGCTTCTAATATTCGAGCTT+CGG - chr1_4:34267011-34267030 Msa0160820:intron 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_4:34267059-34267078 Msa0160820:intron 40.0%
AATGGTGTGAGAAAGAGCAA+CGG - chr1_4:34267093-34267112 Msa0160820:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_4:34267154-34267173 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_4:34267218-34267237 None:intergenic 40.0%
!! TTTCTGAAATGGATAGTGCC+TGG - chr1_4:34267378-34267397 Msa0160820:CDS 40.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_4:34265379-34265398 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_4:34266025-34266044 Msa0160820:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_4:34266035-34266054 Msa0160820:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_4:34266036-34266055 Msa0160820:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_4:34266042-34266061 Msa0160820:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_4:34266043-34266062 Msa0160820:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_4:34266166-34266185 Msa0160820:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_4:34266182-34266201 Msa0160820:CDS 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_4:34266675-34266694 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_4:34266959-34266978 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_4:34267017-34267036 Msa0160820:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_4:34267039-34267058 Msa0160820:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_4:34267058-34267077 Msa0160820:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_4:34267060-34267079 Msa0160820:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_4:34267061-34267080 Msa0160820:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_4:34267140-34267159 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_4:34267238-34267257 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_4:34267243-34267262 Msa0160820:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_4:34267311-34267330 Msa0160820:intron 45.0%
ATTTCTGTCTACGTTGCCGT+TGG - chr1_4:34267505-34267524 Msa0160820:five_prime_UTR 45.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_4:34265379-34265398 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_4:34266025-34266044 Msa0160820:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_4:34266035-34266054 Msa0160820:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_4:34266036-34266055 Msa0160820:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_4:34266042-34266061 Msa0160820:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_4:34266043-34266062 Msa0160820:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_4:34266166-34266185 Msa0160820:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_4:34266182-34266201 Msa0160820:CDS 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_4:34266675-34266694 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_4:34266959-34266978 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_4:34267017-34267036 Msa0160820:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_4:34267039-34267058 Msa0160820:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_4:34267058-34267077 Msa0160820:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_4:34267060-34267079 Msa0160820:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_4:34267061-34267080 Msa0160820:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_4:34267140-34267159 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_4:34267238-34267257 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_4:34267243-34267262 Msa0160820:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_4:34267311-34267330 Msa0160820:intron 45.0%
ATTTCTGTCTACGTTGCCGT+TGG - chr1_4:34267505-34267524 Msa0160820:five_prime_UTR 45.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_4:34265433-34265452 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_4:34265780-34265799 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_4:34266672-34266691 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_4:34266760-34266779 Msa0160820:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_4:34266774-34266793 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_4:34266775-34266794 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_4:34266862-34266881 Msa0160820:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_4:34266868-34266887 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_4:34267141-34267160 None:intergenic 50.0%
AACATGCTCCACAAGGGACA+CGG + chr1_4:34267280-34267299 None:intergenic 50.0%
CCTCTCAACATGCTCCACAA+GGG + chr1_4:34267286-34267305 None:intergenic 50.0%
CCTTGTGGAGCATGTTGAGA+GGG - chr1_4:34267284-34267303 Msa0160820:intron 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_4:34267291-34267310 Msa0160820:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_4:34267294-34267313 Msa0160820:intron 50.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_4:34265433-34265452 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_4:34265780-34265799 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_4:34266672-34266691 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_4:34266760-34266779 Msa0160820:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_4:34266774-34266793 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_4:34266775-34266794 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_4:34266862-34266881 Msa0160820:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_4:34266868-34266887 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_4:34267141-34267160 None:intergenic 50.0%
AACATGCTCCACAAGGGACA+CGG + chr1_4:34267280-34267299 None:intergenic 50.0%
CCTCTCAACATGCTCCACAA+GGG + chr1_4:34267286-34267305 None:intergenic 50.0%
CCTTGTGGAGCATGTTGAGA+GGG - chr1_4:34267284-34267303 Msa0160820:intron 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_4:34267291-34267310 Msa0160820:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_4:34267294-34267313 Msa0160820:intron 50.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_4:34265774-34265793 None:intergenic 55.0%
CGGACTCCTTTAGCGCAAAG+TGG + chr1_4:34266652-34266671 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_4:34267079-34267098 None:intergenic 55.0%
GTGAGAAAGAGCAACGGCAG+TGG - chr1_4:34267099-34267118 Msa0160820:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_4:34267126-34267145 Msa0160820:intron 55.0%
ACATGCTCCACAAGGGACAC+GGG + chr1_4:34267279-34267298 None:intergenic 55.0%
CCCTTGTGGAGCATGTTGAG+AGG - chr1_4:34267283-34267302 Msa0160820:intron 55.0%
CCCTCTCAACATGCTCCACA+AGG + chr1_4:34267287-34267306 None:intergenic 55.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_4:34265774-34265793 None:intergenic 55.0%
CGGACTCCTTTAGCGCAAAG+TGG + chr1_4:34266652-34266671 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_4:34267079-34267098 None:intergenic 55.0%
GTGAGAAAGAGCAACGGCAG+TGG - chr1_4:34267099-34267118 Msa0160820:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_4:34267126-34267145 Msa0160820:intron 55.0%
ACATGCTCCACAAGGGACAC+GGG + chr1_4:34267279-34267298 None:intergenic 55.0%
CCCTTGTGGAGCATGTTGAG+AGG - chr1_4:34267283-34267302 Msa0160820:intron 55.0%
CCCTCTCAACATGCTCCACA+AGG + chr1_4:34267287-34267306 None:intergenic 55.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_4:34265435-34265454 Msa0160820:three_prime_UTR 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_4:34267021-34267040 Msa0160820:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_4:34267074-34267093 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_4:34267075-34267094 Msa0160820:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_4:34267107-34267126 Msa0160820:intron 60.0%
CACAGATCCCGTGTCCCTTG+TGG - chr1_4:34267269-34267288 Msa0160820:intron 60.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_4:34265435-34265454 Msa0160820:three_prime_UTR 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_4:34267021-34267040 Msa0160820:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_4:34267074-34267093 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_4:34267075-34267094 Msa0160820:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_4:34267107-34267126 Msa0160820:intron 60.0%
CACAGATCCCGTGTCCCTTG+TGG - chr1_4:34267269-34267288 Msa0160820:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 34265269 34267532 34265269 ID=Msa0160820;Name=Msa0160820
chr1_4 mRNA 34265269 34267532 34265269 ID=Msa0160820-mRNA-1;Parent=Msa0160820;Name=Msa0160820-mRNA-1;_AED=0.00;_eAED=0.00;_QI=89|1|1|1|1|1|2|200|287
chr1_4 exon 34265269 34266233 34265269 ID=Msa0160820-mRNA-1:exon:10558;Parent=Msa0160820-mRNA-1
chr1_4 exon 34267345 34267532 34267345 ID=Msa0160820-mRNA-1:exon:10557;Parent=Msa0160820-mRNA-1
chr1_4 five_prime_UTR 34267444 34267532 34267444 ID=Msa0160820-mRNA-1:five_prime_utr;Parent=Msa0160820-mRNA-1
chr1_4 CDS 34267345 34267443 34267345 ID=Msa0160820-mRNA-1:cds;Parent=Msa0160820-mRNA-1
chr1_4 CDS 34265469 34266233 34265469 ID=Msa0160820-mRNA-1:cds;Parent=Msa0160820-mRNA-1
chr1_4 three_prime_UTR 34265269 34265468 34265269 ID=Msa0160820-mRNA-1:three_prime_utr;Parent=Msa0160820-mRNA-1
Gene Sequence

>Msa0160820

ATGGGGACTCCAGAATTTCCAGATCTAGGAAAACACTGCTCTGACTCCGATTGCAAGCTCGTTGATTTCTTGCCTTTCACTTGCGATCGCTGCTACCAGGTGTATTGTTTGGAACACCGGAGTTATATCAAACATCGGTGTACAAAAGCTGACAAGCAAGATGTCACTGTAGTAATATGTCCACTTTGCGCTAAAGGAGTCCGCCTAGTTCCTGAGCAAGATCCAAACATAACATGGGAGAATCATGTTAACACCGACTGCGACCCATCAAATTATGAGAAAGTTACAAAGAAGAAAAAGTGCCCTGCAGCTGGATGCAAAGAGATCTTAGTATTCTCAAACACAATTAAATGCAAGGATTGCACAATAGACCATTGTTTGAAGCATAGGTTTGGTCCTGATCACAAATGTCCAGGACCTAAAAAAGTGGAAACAAATTTCCCTTTTATGAATCTAATGAATAGGAGTAGAAAAAAGGAGTCTAAAACCAACTCAAGTTCAACCTCCTCTTCATCTAAATGGACTACAAGCTTTCTTAATGCCGCTTCTAATATTCGAGCTTCGGCTGAGGCTGGAATGTCAAAGTTGAGTGGTGAAATTAACCAAGCCTGGGGGACATCAAGCAATGGTGTGAGAAAGAGCAACGGCAGTGGTCAAGTGGAGCAATGCCCTCAATGCGGTGCCAAGTTTTCCTCGATCACTACTTTAATCGATCATGTGCAAAAAGTTCATGAAAGAAGTGGCAGCCGATCTGTTGCGAATGTTACCATTGATGCGTGTCCTAAGTGTAGTAAAGGATTCACAGATCCCGTGTCCCTTGTGGAGCATGTTGAGAGGGAACATGGTGGCACTTCTAGAACATAG
Protein sequence

>Msa0160820

MGTPEFPDLGKHCSDSDCKLVDFLPFTCDRCYQVYCLEHRSYIKHRCTKADKQDVTVVICPLCAKGVRLVPEQDPNITWENHVNTDCDPSNYEKVTKKKKCPAAGCKEILVFSNTIKCKDCTIDHCLKHRFGPDHKCPGPKKVETNFPFMNLMNRSRKKESKTNSSSTSSSSKWTTSFLNAASNIRASAEAGMSKLSGEINQAWGTSSNGVRKSNGSGQVEQCPQCGAKFSSITTLIDHVQKVHERSGSRSVANVTIDACPKCSKGFTDPVSLVEHVEREHGGTSRT*