AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021610 MtrunA17_Chr1g0173421 97.902 286 6 0 1 286 1 286 0.0 584
Msa0021610 MtrunA17_Chr7g0257681 65.157 287 79 2 1 285 1 268 4.87e-129 367
Msa0021610 MtrunA17_Chr6g0451591 49.640 139 63 2 2 137 50 184 3.36e-38 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021610 AT2G41835.1 62.718 287 97 3 1 286 1 278 4.52e-128 365
Msa0021610 AT3G57480.2 53.310 287 96 2 1 287 1 249 1.42e-106 310
Msa0021610 AT3G57480.1 53.310 287 96 2 1 287 1 249 1.42e-106 310
Msa0021610 AT3G28210.2 41.622 185 78 4 2 183 5 162 2.46e-38 134
Msa0021610 AT3G28210.1 41.622 185 78 4 2 183 5 162 2.46e-38 134
Msa0021610 AT5G48205.1 40.260 154 33 4 1 151 1 98 2.90e-25 99.8

Find 75 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCTAGATCTGGAAATTC+TGG 0.237504 1_1:+38944140 None:intergenic
CTATTCATTAGATTCATAAA+AGG 0.242926 1_1:+38942629 None:intergenic
GTCTCTCTTGTTCTTGGAAT+GGG 0.256857 1_1:-38944167 Msa0021610:exon
CAACCTCCTCTTCATCTAAA+TGG 0.298522 1_1:-38942571 Msa0021610:CDS
ATATCTTGTTGCTGTAAAAC+TGG 0.300732 1_1:+38942105 None:intergenic
ACGACTGTCTCTCTTGTTCT+TGG 0.307348 1_1:-38944173 Msa0021610:five_prime_UTR
TGATTCTCCCATGTTATGTT+TGG 0.324605 1_1:+38942848 None:intergenic
GTAACTTTCTCATAATTTGA+TGG 0.361749 1_1:+38942806 None:intergenic
CGCTTCTAATATTCGAGCTT+CGG 0.377494 1_1:-38942528 Msa0021610:CDS
ATCTCTTTGCATCCAGCTGC+AGG 0.399699 1_1:+38942767 None:intergenic
GGTCCTGGACATTTGTGATC+AGG 0.415571 1_1:+38942674 None:intergenic
TGTCTCTCTTGTTCTTGGAA+TGG 0.417192 1_1:-38944168 Msa0021610:exon
ATATGTCCACTTTGCGCTAA+AGG 0.436581 1_1:-38942896 Msa0021610:CDS
TTGGATCTTGCTCAGGAACT+AGG 0.441768 1_1:+38942867 None:intergenic
TACAGCAACAAGATATGAAA+AGG 0.445440 1_1:-38942098 Msa0021610:three_prime_UTR
CACTTGCGATCGCTGCTACC+AGG 0.446006 1_1:-38944072 Msa0021610:intron
TATTCATTAGATTCATAAAA+GGG 0.454261 1_1:+38942630 None:intergenic
ATTCGAGCTTCGGCTGAGGC+TGG 0.454635 1_1:-38942518 Msa0021610:CDS
CCCTCTCAACATGCTCTACA+AGG 0.457922 1_1:+38942255 None:intergenic
GTTATGTTTGGATCTTGCTC+AGG 0.458286 1_1:+38942860 None:intergenic
ATTTCTGTCTACATTGCTGT+TGG 0.460149 1_1:-38942049 Msa0021610:three_prime_UTR
TAGACCATTGTTTGAAGCAT+AGG 0.461011 1_1:-38942703 Msa0021610:CDS
AGTAGTGATCGAGGAAAACT+TGG 0.461509 1_1:+38942388 None:intergenic
AGAGGAGGTTGAACTTGAGT+TGG 0.472577 1_1:+38942583 None:intergenic
ACTCCAGAATTTCCAGATCT+AGG 0.478228 1_1:-38944143 Msa0021610:CDS
TAACTTTCTCATAATTTGAT+GGG 0.483060 1_1:+38942807 None:intergenic
GTGGTGAAATTAACCAAGCC+TGG 0.484928 1_1:-38942481 Msa0021610:CDS
TATGCTGGATGAATTTATCC+AGG 0.493035 1_1:+38942143 None:intergenic
CATTGTTTGAAGCATAGGTT+TGG 0.498039 1_1:-38942698 Msa0021610:CDS
AAAACTTGGCACCGCATTGA+GGG 0.499599 1_1:+38942402 None:intergenic
TGTAGTCCATTTAGATGAAG+AGG 0.514775 1_1:+38942565 None:intergenic
GAAATCAACGAGCTTGCAAT+CGG 0.515709 1_1:+38944103 None:intergenic
AGGTGTATTGTTTGGAACAC+CGG 0.516965 1_1:-38942973 Msa0021610:CDS
CTCAAACACAATTAAATGCA+AGG 0.517875 1_1:-38942735 Msa0021610:CDS
GCGTGTCCTAAGTGTAGTAA+AGG 0.526636 1_1:-38942296 Msa0021610:CDS
GTGAATCCTTTACTACACTT+AGG 0.538962 1_1:+38942290 None:intergenic
ACACTTAGGACACGCATCAA+TGG 0.539521 1_1:+38942304 None:intergenic
TCTCTCTTGTTCTTGGAATG+GGG 0.540302 1_1:-38944166 Msa0021610:exon
AGCGACAAATGTTTATATGC+TGG 0.545995 1_1:+38942128 None:intergenic
GGTCCTGATCACAAATGTCC+AGG 0.548572 1_1:-38942677 Msa0021610:CDS
CTCGGAAATTTATATTGCGA+AGG 0.549126 1_1:-38944231 None:intergenic
GAAAACTTGGCACCGCATTG+AGG 0.550498 1_1:+38942401 None:intergenic
TGGTGAAATTAACCAAGCCT+GGG 0.551641 1_1:-38942480 Msa0021610:CDS
AGCAAGATCCAAACATAACA+TGG 0.557990 1_1:-38942856 Msa0021610:CDS
TAATATTCGAGCTTCGGCTG+AGG 0.559139 1_1:-38942522 Msa0021610:CDS
GGGAGAAAGAGCAACGGCAG+TGG 0.567326 1_1:-38942440 Msa0021610:CDS
CAAACCTATGCTTCAAACAA+TGG 0.573057 1_1:+38942699 None:intergenic
GAGCAACGGCAGTGGTCAAG+TGG 0.573351 1_1:-38942432 Msa0021610:CDS
TGGTGGCACTTCTAGAACAT+AGG 0.575559 1_1:-38942228 Msa0021610:exon
TAGCAGCGATCGCAAGTGAA+AGG 0.598354 1_1:+38944077 None:intergenic
TGGTAACATTCGCAACAGAT+CGG 0.605303 1_1:+38942324 None:intergenic
CCTTGTAGAGCATGTTGAGA+GGG 0.607205 1_1:-38942255 Msa0021610:CDS
CGGACTCCTTTAGCGCAAAG+TGG 0.607339 1_1:+38942890 None:intergenic
ACCGATGTTTGATATAACTC+CGG 0.608595 1_1:+38942954 None:intergenic
ATAATTTGATGGGTCGCAGT+CGG 0.619214 1_1:+38942817 None:intergenic
AACATGCTCTACAAGGGACA+CGG 0.619670 1_1:+38942262 None:intergenic
AGTCCATTTAGATGAAGAGG+AGG 0.622955 1_1:+38942568 None:intergenic
TCTCTTTGCATCCAGCTGCA+GGG 0.624481 1_1:+38942768 None:intergenic
TATTGCGAAGGAGTGAGTCA+AGG 0.624573 1_1:-38944219 Msa0021610:five_prime_UTR
CGAAGGAGTGAGTCAAGGAG+AGG 0.629499 1_1:-38944214 Msa0021610:five_prime_UTR
GAGCATGTTGAGAGGGAACA+TGG 0.630606 1_1:-38942248 Msa0021610:CDS
ATCGATTAAAGTAGTGATCG+AGG 0.631399 1_1:+38942379 None:intergenic
CCCTTGTAGAGCATGTTGAG+AGG 0.634753 1_1:-38942256 Msa0021610:CDS
CGAAGCTCGAATATTAGAAG+CGG 0.637300 1_1:+38942529 None:intergenic
ACATGCTCTACAAGGGACAC+GGG 0.664740 1_1:+38942263 None:intergenic
GCAAGATCCAAACATAACAT+GGG 0.676319 1_1:-38942855 Msa0021610:CDS
CCTCTCAACATGCTCTACAA+GGG 0.681294 1_1:+38942256 None:intergenic
ACCGGAGTTATATCAAACAT+CGG 0.687208 1_1:-38942955 Msa0021610:CDS
GGTGAAATTAACCAAGCCTG+GGG 0.712063 1_1:-38942479 Msa0021610:CDS
AATGGTGGGAGAAAGAGCAA+CGG 0.715605 1_1:-38942446 Msa0021610:CDS
GATCTTGCTCAGGAACTAGG+CGG 0.720155 1_1:+38942870 None:intergenic
GCTGGAATGTCAAAGTTGAG+TGG 0.723894 1_1:-38942500 Msa0021610:CDS
GTGAAATTAACCAAGCCTGG+GGG 0.745657 1_1:-38942478 Msa0021610:CDS
GTGGAGCAATGCCCTCAATG+CGG 0.747142 1_1:-38942413 Msa0021610:CDS
CATGTTGAGAGGGAACATGG+TGG 0.749762 1_1:-38942245 Msa0021610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCATATAAGCTATTTTTT+GGG + chr1_1:38942479-38942498 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_1:38942480-38942499 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_1:38942852-38942871 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_1:38942853-38942872 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_1:38943121-38943140 Msa0021610:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_1:38943641-38943660 None:intergenic 15.0%
!!! AATCATATAAGCTATTTTTT+GGG + chr1_1:38942479-38942498 None:intergenic 15.0%
!!! TAATCATATAAGCTATTTTT+TGG + chr1_1:38942480-38942499 None:intergenic 15.0%
!!! TGATGATATTTTTATTTTGT+GGG + chr1_1:38942852-38942871 None:intergenic 15.0%
!!! TTGATGATATTTTTATTTTG+TGG + chr1_1:38942853-38942872 None:intergenic 15.0%
!!! ACATTGTATTTTTATTTTTG+AGG - chr1_1:38943121-38943140 Msa0021610:intron 15.0%
!! TATTCATTAGATTCATAAAA+GGG + chr1_1:38943641-38943660 None:intergenic 15.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_1:38942232-38942251 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_1:38942299-38942318 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_1:38942300-38942319 None:intergenic 20.0%
!!! ATCTAATTGAAAAGTACTTT+TGG - chr1_1:38942329-38942348 Msa0021610:CDS 20.0%
!!! CTTTATTTAGATTTTATCTC+AGG - chr1_1:38942416-38942435 Msa0021610:CDS 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_1:38942478-38942497 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_1:38942735-38942754 Msa0021610:CDS 20.0%
!! ATCATAAGTAAAAACATTGT+TGG + chr1_1:38943159-38943178 None:intergenic 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_1:38943464-38943483 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_1:38943618-38943637 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_1:38943642-38943661 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_1:38943640-38943659 Msa0021610:intron 20.0%
!!! AGAAATTGTACTTTTTGAAA+TGG - chr1_1:38944096-38944115 Msa0021610:CDS 20.0%
!! AAGAAAAAGAAAAGAGAAAT+TGG + chr1_1:38942232-38942251 None:intergenic 20.0%
!! AATTATTAAGAATGCATAGT+GGG + chr1_1:38942299-38942318 None:intergenic 20.0%
!! AAATTATTAAGAATGCATAG+TGG + chr1_1:38942300-38942319 None:intergenic 20.0%
!!! ATCTAATTGAAAAGTACTTT+TGG - chr1_1:38942329-38942348 Msa0021610:CDS 20.0%
!!! CTTTATTTAGATTTTATCTC+AGG - chr1_1:38942416-38942435 Msa0021610:CDS 20.0%
!!! ATCATATAAGCTATTTTTTG+GGG + chr1_1:38942478-38942497 None:intergenic 20.0%
!!! AGTTTTATTATAGCCTTTAT+AGG - chr1_1:38942735-38942754 Msa0021610:CDS 20.0%
!! ATCATAAGTAAAAACATTGT+TGG + chr1_1:38943159-38943178 None:intergenic 20.0%
!! TAACTTTCTCATAATTTGAT+GGG + chr1_1:38943464-38943483 None:intergenic 20.0%
!!! AAATTTGTTTCCACTTTTTT+AGG + chr1_1:38943618-38943637 None:intergenic 20.0%
!! CTATTCATTAGATTCATAAA+AGG + chr1_1:38943642-38943661 None:intergenic 20.0%
!!! CTTTTATGAATCTAATGAAT+AGG - chr1_1:38943640-38943659 Msa0021610:intron 20.0%
!!! AGAAATTGTACTTTTTGAAA+TGG - chr1_1:38944096-38944115 Msa0021610:CDS 20.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_1:38942273-38942292 None:intergenic 25.0%
!! TTTTGGCCTAGATTTTATTA+GGG - chr1_1:38942346-38942365 Msa0021610:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_1:38942353-38942372 Msa0021610:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_1:38942497-38942516 Msa0021610:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_1:38942571-38942590 Msa0021610:CDS 25.0%
! TTATTCGATAAGCTGTTATA+GGG + chr1_1:38942650-38942669 None:intergenic 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_1:38942651-38942670 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_1:38942675-38942694 Msa0021610:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_1:38942740-38942759 Msa0021610:CDS 25.0%
! AAACTATCATGTGAACAAAT+TGG - chr1_1:38942871-38942890 Msa0021610:CDS 25.0%
! CAAACGGTTTATCAAAATTA+CGG - chr1_1:38942986-38943005 Msa0021610:intron 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_1:38943087-38943106 Msa0021610:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_1:38943091-38943110 None:intergenic 25.0%
!!! GTATTTTTATTTTTGAGGTG+TGG - chr1_1:38943126-38943145 Msa0021610:intron 25.0%
!!! ATTTTGTTTGATGACATTCT+TGG - chr1_1:38943177-38943196 Msa0021610:intron 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_1:38943465-38943484 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_1:38943653-38943672 Msa0021610:intron 25.0%
! TTAATTAAACAGAAACAACG+TGG + chr1_1:38942273-38942292 None:intergenic 25.0%
!! TTTTGGCCTAGATTTTATTA+GGG - chr1_1:38942346-38942365 Msa0021610:CDS 25.0%
!! CTAGATTTTATTAGGGTTTT+GGG - chr1_1:38942353-38942372 Msa0021610:CDS 25.0%
! TTAAGTGCTTAGTCTATATT+AGG - chr1_1:38942497-38942516 Msa0021610:CDS 25.0%
!!! TATAACTTGTTGCTTTGAAT+TGG - chr1_1:38942571-38942590 Msa0021610:CDS 25.0%
! TTATTCGATAAGCTGTTATA+GGG + chr1_1:38942650-38942669 None:intergenic 25.0%
! TTTATTCGATAAGCTGTTAT+AGG + chr1_1:38942651-38942670 None:intergenic 25.0%
! TAATTAATACAAACTAGCGA+AGG - chr1_1:38942675-38942694 Msa0021610:CDS 25.0%
! TATTATAGCCTTTATAGGAT+AGG - chr1_1:38942740-38942759 Msa0021610:CDS 25.0%
! AAACTATCATGTGAACAAAT+TGG - chr1_1:38942871-38942890 Msa0021610:CDS 25.0%
! CAAACGGTTTATCAAAATTA+CGG - chr1_1:38942986-38943005 Msa0021610:intron 25.0%
!! TCCTAAACGATTTTCATTTT+TGG - chr1_1:38943087-38943106 Msa0021610:intron 25.0%
! ACCAAAAATGAAAATCGTTT+AGG + chr1_1:38943091-38943110 None:intergenic 25.0%
!!! GTATTTTTATTTTTGAGGTG+TGG - chr1_1:38943126-38943145 Msa0021610:intron 25.0%
!!! ATTTTGTTTGATGACATTCT+TGG - chr1_1:38943177-38943196 Msa0021610:intron 25.0%
! GTAACTTTCTCATAATTTGA+TGG + chr1_1:38943465-38943484 None:intergenic 25.0%
! AATGAATAGGAGTAGAAAAA+AGG - chr1_1:38943653-38943672 Msa0021610:intron 25.0%
! CTTTTGGCCTAGATTTTATT+AGG - chr1_1:38942345-38942364 Msa0021610:CDS 30.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_1:38942355-38942374 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_1:38942352-38942371 Msa0021610:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_1:38942360-38942379 Msa0021610:CDS 30.0%
AAATCGAAACTACCCTTAAA+TGG + chr1_1:38942389-38942408 None:intergenic 30.0%
TTATAGCTTCTCAAAAGTCA+CGG + chr1_1:38942556-38942575 None:intergenic 30.0%
TATCATGTGAACAAATTGGA+AGG - chr1_1:38942875-38942894 Msa0021610:CDS 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_1:38942924-38942943 None:intergenic 30.0%
ATTACGGTATTGCAGAAAAT+AGG - chr1_1:38943002-38943021 Msa0021610:intron 30.0%
TTACGGTATTGCAGAAAATA+GGG - chr1_1:38943003-38943022 Msa0021610:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_1:38943290-38943309 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_1:38943291-38943310 None:intergenic 30.0%
CTCAAACACAATTAAATGCA+AGG - chr1_1:38943533-38943552 Msa0021610:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_1:38943918-38943937 Msa0021610:intron 30.0%
ATATCTTGTTGCTGTAAAAC+TGG + chr1_1:38944166-38944185 None:intergenic 30.0%
TACAGCAACAAGATATGAAA+AGG - chr1_1:38944170-38944189 Msa0021610:exon 30.0%
! CTTTTGGCCTAGATTTTATT+AGG - chr1_1:38942345-38942364 Msa0021610:CDS 30.0%
CCAAAACCCTAATAAAATCT+AGG + chr1_1:38942355-38942374 None:intergenic 30.0%
! CCTAGATTTTATTAGGGTTT+TGG - chr1_1:38942352-38942371 Msa0021610:CDS 30.0%
!!! TTATTAGGGTTTTGGGTTTA+CGG - chr1_1:38942360-38942379 Msa0021610:CDS 30.0%
AAATCGAAACTACCCTTAAA+TGG + chr1_1:38942389-38942408 None:intergenic 30.0%
TTATAGCTTCTCAAAAGTCA+CGG + chr1_1:38942556-38942575 None:intergenic 30.0%
TATCATGTGAACAAATTGGA+AGG - chr1_1:38942875-38942894 Msa0021610:CDS 30.0%
! TTGAACAAACCTCTATTTTC+TGG + chr1_1:38942924-38942943 None:intergenic 30.0%
ATTACGGTATTGCAGAAAAT+AGG - chr1_1:38943002-38943021 Msa0021610:intron 30.0%
TTACGGTATTGCAGAAAATA+GGG - chr1_1:38943003-38943022 Msa0021610:intron 30.0%
CCAAACAATACACCTAAAAT+GGG + chr1_1:38943290-38943309 None:intergenic 30.0%
TCCAAACAATACACCTAAAA+TGG + chr1_1:38943291-38943310 None:intergenic 30.0%
CTCAAACACAATTAAATGCA+AGG - chr1_1:38943533-38943552 Msa0021610:intron 30.0%
CAAAAAGTTCATGAAAGAAG+TGG - chr1_1:38943918-38943937 Msa0021610:intron 30.0%
ATATCTTGTTGCTGTAAAAC+TGG + chr1_1:38944166-38944185 None:intergenic 30.0%
TACAGCAACAAGATATGAAA+AGG - chr1_1:38944170-38944189 Msa0021610:exon 30.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_1:38942131-38942150 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+GGG - chr1_1:38942374-38942393 Msa0021610:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_1:38942615-38942634 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_1:38942618-38942637 Msa0021610:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_1:38942745-38942764 Msa0021610:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_1:38942751-38942770 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_1:38942808-38942827 None:intergenic 35.0%
CTACAGCTACAATGCTATAA+CGG - chr1_1:38942955-38942974 Msa0021610:CDS 35.0%
! TTCTTGGAATTTGCGTTTTG+TGG - chr1_1:38943193-38943212 Msa0021610:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_1:38943275-38943294 Msa0021610:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_1:38943285-38943304 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_1:38943287-38943306 Msa0021610:intron 35.0%
ACCGGAGTTATATCAAACAT+CGG - chr1_1:38943313-38943332 Msa0021610:intron 35.0%
ACCGATGTTTGATATAACTC+CGG + chr1_1:38943317-38943336 None:intergenic 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_1:38943412-38943431 Msa0021610:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_1:38943413-38943432 Msa0021610:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_1:38943423-38943442 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_1:38943565-38943584 Msa0021610:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_1:38943572-38943591 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_1:38943570-38943589 Msa0021610:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_1:38943706-38943725 None:intergenic 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_1:38943892-38943911 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_1:38943981-38944000 None:intergenic 35.0%
!!! TTTTTGAAATGGATAGTGCC+TGG - chr1_1:38944107-38944126 Msa0021610:CDS 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_1:38944128-38944147 None:intergenic 35.0%
AGCGACAAATGTTTATATGC+TGG + chr1_1:38944143-38944162 None:intergenic 35.0%
ATTTCTGTCTACATTGCTGT+TGG - chr1_1:38944219-38944238 Msa0021610:five_prime_UTR 35.0%
TTTCCTAGATCTGGAAATTC+TGG + chr1_1:38942131-38942150 None:intergenic 35.0%
GGTTTACGGTATCCATTTAA+GGG - chr1_1:38942374-38942393 Msa0021610:CDS 35.0%
!!! AGCCTGTTTGTTTTTTGAGT+GGG + chr1_1:38942615-38942634 None:intergenic 35.0%
CAAAAAACAAACAGGCTCTT+AGG - chr1_1:38942618-38942637 Msa0021610:CDS 35.0%
TAGCCTTTATAGGATAGGAT+AGG - chr1_1:38942745-38942764 Msa0021610:CDS 35.0%
TCTCCTATCCTATCCTATAA+AGG + chr1_1:38942751-38942770 None:intergenic 35.0%
AATAAACGCGAAGCTTCAAT+TGG + chr1_1:38942808-38942827 None:intergenic 35.0%
CTACAGCTACAATGCTATAA+CGG - chr1_1:38942955-38942974 Msa0021610:CDS 35.0%
! TTCTTGGAATTTGCGTTTTG+TGG - chr1_1:38943193-38943212 Msa0021610:intron 35.0%
! GTATAAGCCAAACCCATTTT+AGG - chr1_1:38943275-38943294 Msa0021610:intron 35.0%
! CAATACACCTAAAATGGGTT+TGG + chr1_1:38943285-38943304 None:intergenic 35.0%
!! CCCATTTTAGGTGTATTGTT+TGG - chr1_1:38943287-38943306 Msa0021610:intron 35.0%
ACCGGAGTTATATCAAACAT+CGG - chr1_1:38943313-38943332 Msa0021610:intron 35.0%
ACCGATGTTTGATATAACTC+CGG + chr1_1:38943317-38943336 None:intergenic 35.0%
AGCAAGATCCAAACATAACA+TGG - chr1_1:38943412-38943431 Msa0021610:intron 35.0%
GCAAGATCCAAACATAACAT+GGG - chr1_1:38943413-38943432 Msa0021610:intron 35.0%
TGATTCTCCCATGTTATGTT+TGG + chr1_1:38943423-38943442 None:intergenic 35.0%
! TAGACCATTGTTTGAAGCAT+AGG - chr1_1:38943565-38943584 Msa0021610:intron 35.0%
CAAACCTATGCTTCAAACAA+TGG + chr1_1:38943572-38943591 None:intergenic 35.0%
! CATTGTTTGAAGCATAGGTT+TGG - chr1_1:38943570-38943589 Msa0021610:intron 35.0%
TGTAGTCCATTTAGATGAAG+AGG + chr1_1:38943706-38943725 None:intergenic 35.0%
ATCGATTAAAGTAGTGATCG+AGG + chr1_1:38943892-38943911 None:intergenic 35.0%
GTGAATCCTTTACTACACTT+AGG + chr1_1:38943981-38944000 None:intergenic 35.0%
!!! TTTTTGAAATGGATAGTGCC+TGG - chr1_1:38944107-38944126 Msa0021610:CDS 35.0%
TATGCTGGATGAATTTATCC+AGG + chr1_1:38944128-38944147 None:intergenic 35.0%
AGCGACAAATGTTTATATGC+TGG + chr1_1:38944143-38944162 None:intergenic 35.0%
ATTTCTGTCTACATTGCTGT+TGG - chr1_1:38944219-38944238 Msa0021610:five_prime_UTR 35.0%
TGTCTCTCTTGTTCTTGGAA+TGG - chr1_1:38942100-38942119 Msa0021610:three_prime_UTR 40.0%
GTCTCTCTTGTTCTTGGAAT+GGG - chr1_1:38942101-38942120 Msa0021610:three_prime_UTR 40.0%
TCTCTCTTGTTCTTGGAATG+GGG - chr1_1:38942102-38942121 Msa0021610:three_prime_UTR 40.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_1:38942125-38942144 Msa0021610:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_1:38942168-38942187 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_1:38942217-38942236 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_1:38942255-38942274 None:intergenic 40.0%
GGGTTTACGGTATCCATTTA+AGG - chr1_1:38942373-38942392 Msa0021610:CDS 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_1:38942530-38942549 Msa0021610:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_1:38942610-38942629 Msa0021610:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_1:38942616-38942635 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_1:38942686-38942705 Msa0021610:CDS 40.0%
TATAACGGTGCAGAGTCAAA+CGG - chr1_1:38942970-38942989 Msa0021610:CDS 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_1:38943271-38943290 None:intergenic 40.0%
! AGGTGTATTGTTTGGAACAC+CGG - chr1_1:38943295-38943314 Msa0021610:intron 40.0%
ATATGTCCACTTTGCGCTAA+AGG - chr1_1:38943372-38943391 Msa0021610:intron 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_1:38943411-38943430 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_1:38943454-38943473 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_1:38943605-38943624 Msa0021610:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_1:38943612-38943631 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_1:38943697-38943716 Msa0021610:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_1:38943703-38943722 None:intergenic 40.0%
CGAAGCTCGAATATTAGAAG+CGG + chr1_1:38943742-38943761 None:intergenic 40.0%
CGCTTCTAATATTCGAGCTT+CGG - chr1_1:38943740-38943759 Msa0021610:intron 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_1:38943788-38943807 Msa0021610:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_1:38943883-38943902 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_1:38943947-38943966 None:intergenic 40.0%
TGTCTCTCTTGTTCTTGGAA+TGG - chr1_1:38942100-38942119 Msa0021610:three_prime_UTR 40.0%
GTCTCTCTTGTTCTTGGAAT+GGG - chr1_1:38942101-38942120 Msa0021610:three_prime_UTR 40.0%
TCTCTCTTGTTCTTGGAATG+GGG - chr1_1:38942102-38942121 Msa0021610:three_prime_UTR 40.0%
ACTCCAGAATTTCCAGATCT+AGG - chr1_1:38942125-38942144 Msa0021610:three_prime_UTR 40.0%
GAAATCAACGAGCTTGCAAT+CGG + chr1_1:38942168-38942187 None:intergenic 40.0%
GAAATTGGTTAGTACGAACC+TGG + chr1_1:38942217-38942236 None:intergenic 40.0%
CGTGGACACATAAAAGTTGA+AGG + chr1_1:38942255-38942274 None:intergenic 40.0%
GGGTTTACGGTATCCATTTA+AGG - chr1_1:38942373-38942392 Msa0021610:CDS 40.0%
ATACCACTTCCAATGCAAGT+TGG - chr1_1:38942530-38942549 Msa0021610:CDS 40.0%
CACCCACTCAAAAAACAAAC+AGG - chr1_1:38942610-38942629 Msa0021610:CDS 40.0%
!!! GAGCCTGTTTGTTTTTTGAG+TGG + chr1_1:38942616-38942635 None:intergenic 40.0%
AACTAGCGAAGGATGAGAAT+TGG - chr1_1:38942686-38942705 Msa0021610:CDS 40.0%
TATAACGGTGCAGAGTCAAA+CGG - chr1_1:38942970-38942989 Msa0021610:CDS 40.0%
! TGGGTTTGGCTTATACAGTT+AGG + chr1_1:38943271-38943290 None:intergenic 40.0%
! AGGTGTATTGTTTGGAACAC+CGG - chr1_1:38943295-38943314 Msa0021610:intron 40.0%
ATATGTCCACTTTGCGCTAA+AGG - chr1_1:38943372-38943391 Msa0021610:intron 40.0%
GTTATGTTTGGATCTTGCTC+AGG + chr1_1:38943411-38943430 None:intergenic 40.0%
! ATAATTTGATGGGTCGCAGT+CGG + chr1_1:38943454-38943473 None:intergenic 40.0%
ATGTCCAGGACCTAAAAAAG+TGG - chr1_1:38943605-38943624 Msa0021610:intron 40.0%
!!! GTTTCCACTTTTTTAGGTCC+TGG + chr1_1:38943612-38943631 None:intergenic 40.0%
CAACCTCCTCTTCATCTAAA+TGG - chr1_1:38943697-38943716 Msa0021610:intron 40.0%
AGTCCATTTAGATGAAGAGG+AGG + chr1_1:38943703-38943722 None:intergenic 40.0%
CGAAGCTCGAATATTAGAAG+CGG + chr1_1:38943742-38943761 None:intergenic 40.0%
CGCTTCTAATATTCGAGCTT+CGG - chr1_1:38943740-38943759 Msa0021610:intron 40.0%
TGGTGAAATTAACCAAGCCT+GGG - chr1_1:38943788-38943807 Msa0021610:intron 40.0%
AGTAGTGATCGAGGAAAACT+TGG + chr1_1:38943883-38943902 None:intergenic 40.0%
TGGTAACATTCGCAACAGAT+CGG + chr1_1:38943947-38943966 None:intergenic 40.0%
TATTGCGAAGGAGTGAGTCA+AGG - chr1_1:38942049-38942068 Msa0021610:three_prime_UTR 45.0%
ACGACTGTCTCTCTTGTTCT+TGG - chr1_1:38942095-38942114 Msa0021610:three_prime_UTR 45.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_1:38942140-38942159 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_1:38942755-38942774 Msa0021610:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_1:38942765-38942784 Msa0021610:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_1:38942766-38942785 Msa0021610:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_1:38942772-38942791 Msa0021610:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_1:38942773-38942792 Msa0021610:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_1:38942896-38942915 Msa0021610:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_1:38942912-38942931 Msa0021610:CDS 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_1:38943404-38943423 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_1:38943688-38943707 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_1:38943746-38943765 Msa0021610:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_1:38943768-38943787 Msa0021610:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_1:38943787-38943806 Msa0021610:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_1:38943789-38943808 Msa0021610:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_1:38943790-38943809 Msa0021610:intron 45.0%
! AATGGTGGGAGAAAGAGCAA+CGG - chr1_1:38943822-38943841 Msa0021610:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_1:38943869-38943888 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_1:38943967-38943986 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_1:38943972-38943991 Msa0021610:intron 45.0%
AACATGCTCTACAAGGGACA+CGG + chr1_1:38944009-38944028 None:intergenic 45.0%
CCTCTCAACATGCTCTACAA+GGG + chr1_1:38944015-38944034 None:intergenic 45.0%
CCTTGTAGAGCATGTTGAGA+GGG - chr1_1:38944013-38944032 Msa0021610:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_1:38944040-38944059 Msa0021610:intron 45.0%
TATTGCGAAGGAGTGAGTCA+AGG - chr1_1:38942049-38942068 Msa0021610:three_prime_UTR 45.0%
ACGACTGTCTCTCTTGTTCT+TGG - chr1_1:38942095-38942114 Msa0021610:three_prime_UTR 45.0%
! GAGCAGTGTTTTCCTAGATC+TGG + chr1_1:38942140-38942159 None:intergenic 45.0%
AGGATAGGATAGGAGAGTGA+TGG - chr1_1:38942755-38942774 Msa0021610:CDS 45.0%
AGGAGAGTGATGGTTAAGAG+TGG - chr1_1:38942765-38942784 Msa0021610:CDS 45.0%
GGAGAGTGATGGTTAAGAGT+GGG - chr1_1:38942766-38942785 Msa0021610:CDS 45.0%
TGATGGTTAAGAGTGGGAAC+TGG - chr1_1:38942772-38942791 Msa0021610:CDS 45.0%
GATGGTTAAGAGTGGGAACT+GGG - chr1_1:38942773-38942792 Msa0021610:CDS 45.0%
GGAATCAGTGTTGTCAATCG+CGG - chr1_1:38942896-38942915 Msa0021610:CDS 45.0%
ATCGCGGATCCAGAAAATAG+AGG - chr1_1:38942912-38942931 Msa0021610:CDS 45.0%
TTGGATCTTGCTCAGGAACT+AGG + chr1_1:38943404-38943423 None:intergenic 45.0%
AGAGGAGGTTGAACTTGAGT+TGG + chr1_1:38943688-38943707 None:intergenic 45.0%
TAATATTCGAGCTTCGGCTG+AGG - chr1_1:38943746-38943765 Msa0021610:intron 45.0%
GCTGGAATGTCAAAGTTGAG+TGG - chr1_1:38943768-38943787 Msa0021610:intron 45.0%
GTGGTGAAATTAACCAAGCC+TGG - chr1_1:38943787-38943806 Msa0021610:intron 45.0%
GGTGAAATTAACCAAGCCTG+GGG - chr1_1:38943789-38943808 Msa0021610:intron 45.0%
GTGAAATTAACCAAGCCTGG+GGG - chr1_1:38943790-38943809 Msa0021610:intron 45.0%
! AATGGTGGGAGAAAGAGCAA+CGG - chr1_1:38943822-38943841 Msa0021610:intron 45.0%
AAAACTTGGCACCGCATTGA+GGG + chr1_1:38943869-38943888 None:intergenic 45.0%
ACACTTAGGACACGCATCAA+TGG + chr1_1:38943967-38943986 None:intergenic 45.0%
GCGTGTCCTAAGTGTAGTAA+AGG - chr1_1:38943972-38943991 Msa0021610:intron 45.0%
AACATGCTCTACAAGGGACA+CGG + chr1_1:38944009-38944028 None:intergenic 45.0%
CCTCTCAACATGCTCTACAA+GGG + chr1_1:38944015-38944034 None:intergenic 45.0%
CCTTGTAGAGCATGTTGAGA+GGG - chr1_1:38944013-38944032 Msa0021610:intron 45.0%
!! TGGTGGCACTTCTAGAACAT+AGG - chr1_1:38944040-38944059 Msa0021610:intron 45.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_1:38942194-38942213 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_1:38942542-38942561 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_1:38943401-38943420 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_1:38943489-38943508 Msa0021610:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_1:38943503-38943522 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_1:38943504-38943523 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_1:38943591-38943610 Msa0021610:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_1:38943597-38943616 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_1:38943870-38943889 None:intergenic 50.0%
ACATGCTCTACAAGGGACAC+GGG + chr1_1:38944008-38944027 None:intergenic 50.0%
CCCTTGTAGAGCATGTTGAG+AGG - chr1_1:38944012-38944031 Msa0021610:intron 50.0%
CCCTCTCAACATGCTCTACA+AGG + chr1_1:38944016-38944035 None:intergenic 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_1:38944020-38944039 Msa0021610:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_1:38944023-38944042 Msa0021610:intron 50.0%
TAGCAGCGATCGCAAGTGAA+AGG + chr1_1:38942194-38942213 None:intergenic 50.0%
AAGTCACGGCCAACTTGCAT+TGG + chr1_1:38942542-38942561 None:intergenic 50.0%
GATCTTGCTCAGGAACTAGG+CGG + chr1_1:38943401-38943420 None:intergenic 50.0%
!! AAGAAAAAGTGCCCTGCAGC+TGG - chr1_1:38943489-38943508 Msa0021610:intron 50.0%
TCTCTTTGCATCCAGCTGCA+GGG + chr1_1:38943503-38943522 None:intergenic 50.0%
ATCTCTTTGCATCCAGCTGC+AGG + chr1_1:38943504-38943523 None:intergenic 50.0%
GGTCCTGATCACAAATGTCC+AGG - chr1_1:38943591-38943610 Msa0021610:intron 50.0%
GGTCCTGGACATTTGTGATC+AGG + chr1_1:38943597-38943616 None:intergenic 50.0%
GAAAACTTGGCACCGCATTG+AGG + chr1_1:38943870-38943889 None:intergenic 50.0%
ACATGCTCTACAAGGGACAC+GGG + chr1_1:38944008-38944027 None:intergenic 50.0%
CCCTTGTAGAGCATGTTGAG+AGG - chr1_1:38944012-38944031 Msa0021610:intron 50.0%
CCCTCTCAACATGCTCTACA+AGG + chr1_1:38944016-38944035 None:intergenic 50.0%
GAGCATGTTGAGAGGGAACA+TGG - chr1_1:38944020-38944039 Msa0021610:intron 50.0%
CATGTTGAGAGGGAACATGG+TGG - chr1_1:38944023-38944042 Msa0021610:intron 50.0%
CGAAGGAGTGAGTCAAGGAG+AGG - chr1_1:38942054-38942073 Msa0021610:three_prime_UTR 55.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_1:38942536-38942555 None:intergenic 55.0%
CGGACTCCTTTAGCGCAAAG+TGG + chr1_1:38943381-38943400 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_1:38943808-38943827 None:intergenic 55.0%
TGGGGGACATCAAGCAATGG+TGG - chr1_1:38943807-38943826 Msa0021610:intron 55.0%
GGGGGACATCAAGCAATGGT+GGG - chr1_1:38943808-38943827 Msa0021610:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_1:38943855-38943874 Msa0021610:intron 55.0%
CGAAGGAGTGAGTCAAGGAG+AGG - chr1_1:38942054-38942073 Msa0021610:three_prime_UTR 55.0%
CGGCCAACTTGCATTGGAAG+TGG + chr1_1:38942536-38942555 None:intergenic 55.0%
CGGACTCCTTTAGCGCAAAG+TGG + chr1_1:38943381-38943400 None:intergenic 55.0%
ACCATTGCTTGATGTCCCCC+AGG + chr1_1:38943808-38943827 None:intergenic 55.0%
TGGGGGACATCAAGCAATGG+TGG - chr1_1:38943807-38943826 Msa0021610:intron 55.0%
GGGGGACATCAAGCAATGGT+GGG - chr1_1:38943808-38943827 Msa0021610:intron 55.0%
GTGGAGCAATGCCCTCAATG+CGG - chr1_1:38943855-38943874 Msa0021610:intron 55.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_1:38942196-38942215 Msa0021610:three_prime_UTR 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_1:38943750-38943769 Msa0021610:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_1:38943803-38943822 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_1:38943804-38943823 Msa0021610:intron 60.0%
GGGAGAAAGAGCAACGGCAG+TGG - chr1_1:38943828-38943847 Msa0021610:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_1:38943836-38943855 Msa0021610:intron 60.0%
CACTTGCGATCGCTGCTACC+AGG - chr1_1:38942196-38942215 Msa0021610:three_prime_UTR 60.0%
ATTCGAGCTTCGGCTGAGGC+TGG - chr1_1:38943750-38943769 Msa0021610:intron 60.0%
TGCTTGATGTCCCCCAGGCT+TGG + chr1_1:38943803-38943822 None:intergenic 60.0%
GCCTGGGGGACATCAAGCAA+TGG - chr1_1:38943804-38943823 Msa0021610:intron 60.0%
GGGAGAAAGAGCAACGGCAG+TGG - chr1_1:38943828-38943847 Msa0021610:intron 60.0%
GAGCAACGGCAGTGGTCAAG+TGG - chr1_1:38943836-38943855 Msa0021610:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 38942044 38944246 38942044 ID=Msa0021610;Name=Msa0021610
chr1_1 mRNA 38942044 38944246 38942044 ID=Msa0021610-mRNA-1;Parent=Msa0021610;Name=Msa0021610-mRNA-1;_AED=0.15;_eAED=0.15;_QI=75|1|1|1|1|1|2|185|287
chr1_1 exon 38942044 38942993 38942044 ID=Msa0021610-mRNA-1:exon:11966;Parent=Msa0021610-mRNA-1
chr1_1 exon 38944073 38944246 38944073 ID=Msa0021610-mRNA-1:exon:11965;Parent=Msa0021610-mRNA-1
chr1_1 five_prime_UTR 38944172 38944246 38944172 ID=Msa0021610-mRNA-1:five_prime_utr;Parent=Msa0021610-mRNA-1
chr1_1 CDS 38944073 38944171 38944073 ID=Msa0021610-mRNA-1:cds;Parent=Msa0021610-mRNA-1
chr1_1 CDS 38942229 38942993 38942229 ID=Msa0021610-mRNA-1:cds;Parent=Msa0021610-mRNA-1
chr1_1 three_prime_UTR 38942044 38942228 38942044 ID=Msa0021610-mRNA-1:three_prime_utr;Parent=Msa0021610-mRNA-1
Gene Sequence

>Msa0021610

ATGGGGACTCCAGAATTTCCAGATCTAGGAAAACACTGCTCTGACTCCGATTGCAAGCTCGTTGATTTCTTGCCTTTCACTTGCGATCGCTGCTACCAGGTGTATTGTTTGGAACACCGGAGTTATATCAAACATCGGTGTACAAAAGCTGACAAGCAAGATGTCACTGTAGTAATATGTCCACTTTGCGCTAAAGGAGTCCGCCTAGTTCCTGAGCAAGATCCAAACATAACATGGGAGAATCATGTTAACACCGACTGCGACCCATCAAATTATGAGAAAGTTACAAAGAAGAAAAAGTGCCCTGCAGCTGGATGCAAAGAGATCTTAGTATTCTCAAACACAATTAAATGCAAGGATTGCACAATAGACCATTGTTTGAAGCATAGGTTTGGTCCTGATCACAAATGTCCAGGACCTAAAAAAGTGGAAACAAATTTCCCTTTTATGAATCTAATGAATAGGAGTAGAAAAAAGGAGTCTAAAACCAACTCAAGTTCAACCTCCTCTTCATCTAAATGGACTACAAGCTTTCTTAATGCCGCTTCTAATATTCGAGCTTCGGCTGAGGCTGGAATGTCAAAGTTGAGTGGTGAAATTAACCAAGCCTGGGGGACATCAAGCAATGGTGGGAGAAAGAGCAACGGCAGTGGTCAAGTGGAGCAATGCCCTCAATGCGGTGCCAAGTTTTCCTCGATCACTACTTTAATCGATCATGTGCAAAAAGTTCATGAAAGAAGTGGCAGCCGATCTGTTGCGAATGTTACCATTGATGCGTGTCCTAAGTGTAGTAAAGGATTCACAGATCCCGTGTCCCTTGTAGAGCATGTTGAGAGGGAACATGGTGGCACTTCTAGAACATAG
Protein sequence

>Msa0021610

MGTPEFPDLGKHCSDSDCKLVDFLPFTCDRCYQVYCLEHRSYIKHRCTKADKQDVTVVICPLCAKGVRLVPEQDPNITWENHVNTDCDPSNYEKVTKKKKCPAAGCKEILVFSNTIKCKDCTIDHCLKHRFGPDHKCPGPKKVETNFPFMNLMNRSRKKESKTNSSSTSSSSKWTTSFLNAASNIRASAEAGMSKLSGEINQAWGTSSNGGRKSNGSGQVEQCPQCGAKFSSITTLIDHVQKVHERSGSRSVANVTIDACPKCSKGFTDPVSLVEHVEREHGGTSRT*