AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0161380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161380 MtrunA17_Chr1g0175191 97.020 1376 11 2 9 1384 253 1598 0.0 2751
Msa0161380 MtrunA17_Chr7g0257101 46.061 330 156 5 281 596 560 881 5.99e-88 315
Msa0161380 MtrunA17_Chr7g0257101 44.635 233 116 4 845 1069 1190 1417 9.36e-50 194
Msa0161380 MtrunA17_Chr4g0066741 44.872 312 159 4 286 597 173 471 1.61e-80 288
Msa0161380 MtrunA17_Chr4g0066741 52.597 154 72 1 846 998 488 641 6.32e-42 168
Msa0161380 MtrunA17_Chr2g0286291 44.156 308 163 4 290 597 176 474 7.59e-80 286
Msa0161380 MtrunA17_Chr2g0286291 54.815 135 60 1 865 998 510 644 1.22e-39 160
Msa0161380 MtrunA17_Chr1g0205891 45.455 297 155 3 306 597 376 670 6.60e-74 268
Msa0161380 MtrunA17_Chr1g0205891 54.430 158 71 1 846 1002 685 842 6.18e-49 190
Msa0161380 MtrunA17_Chr5g0394201 43.506 308 166 4 296 597 352 657 2.64e-71 260
Msa0161380 MtrunA17_Chr5g0394201 55.696 158 69 1 846 1002 671 828 8.39e-50 193
Msa0161380 MtrunA17_Chr5g0403921 39.763 337 177 9 295 608 173 506 7.80e-70 250
Msa0161380 MtrunA17_Chr5g0403921 46.409 181 94 2 835 1012 494 674 1.66e-42 167
Msa0161380 MtrunA17_Chr4g0066651 40.667 300 166 3 306 596 989 1285 2.66e-66 248
Msa0161380 MtrunA17_Chr4g0066651 43.529 170 93 2 835 1001 1294 1463 1.12e-36 152
Msa0161380 MtrunA17_Chr7g0248031 40.184 326 168 5 293 594 981 1303 5.73e-61 231
Msa0161380 MtrunA17_Chr7g0248031 48.780 123 62 1 846 967 1320 1442 1.29e-27 122
Msa0161380 MtrunA17_Chr8g0348721 41.066 319 163 8 299 594 979 1295 6.26e-61 231
Msa0161380 MtrunA17_Chr8g0348721 44.853 136 72 2 835 967 1299 1434 1.68e-26 119
Msa0161380 MtrunA17_Chr5g0442141 38.801 317 174 5 290 596 601 907 1.87e-60 229
Msa0161380 MtrunA17_Chr5g0442141 53.846 156 71 1 842 996 928 1083 3.52e-42 169
Msa0161380 MtrunA17_Chr3g0095091 38.538 301 165 4 306 596 571 861 8.49e-58 220
Msa0161380 MtrunA17_Chr3g0095091 53.846 156 71 1 842 996 882 1037 6.91e-42 169
Msa0161380 MtrunA17_Chr1g0163011 38.365 318 158 9 306 595 195 502 4.54e-55 206
Msa0161380 MtrunA17_Chr1g0163011 54.305 151 69 0 847 997 570 720 1.21e-44 174
Msa0161380 MtrunA17_Chr3g0137091 37.618 319 168 4 300 597 283 591 6.19e-54 207
Msa0161380 MtrunA17_Chr3g0137091 50.667 150 73 1 847 995 611 760 1.81e-38 157
Msa0161380 MtrunA17_Chr4g0052341 37.217 309 166 5 305 597 744 1040 3.27e-48 189
Msa0161380 MtrunA17_Chr4g0052341 47.938 194 97 3 847 1036 1060 1253 2.62e-41 167
Msa0161380 MtrunA17_Chr4g0017211 33.433 335 185 6 302 604 1446 1774 2.07e-43 174
Msa0161380 MtrunA17_Chr4g0017211 33.333 216 130 4 864 1076 1829 2033 1.07e-27 122
Msa0161380 MtrunA17_Chr1g0183681 30.878 353 195 9 287 596 372 718 2.42e-42 169
Msa0161380 MtrunA17_Chr1g0183681 44.643 168 92 1 847 1014 735 901 4.64e-39 159
Msa0161380 MtrunA17_Chr8g0384531 34.024 338 180 10 290 598 372 695 1.62e-41 167
Msa0161380 MtrunA17_Chr8g0384531 39.130 161 97 1 855 1015 748 907 3.84e-28 123
Msa0161380 MtrunA17_Chr7g0232121 32.704 318 188 8 302 597 35 348 3.05e-41 165
Msa0161380 MtrunA17_Chr7g0232121 49.359 156 67 2 847 990 365 520 1.07e-36 150
Msa0161380 MtrunA17_Chr7g0231521 49.359 156 67 2 847 990 286 441 1.03e-36 150
Msa0161380 MtrunA17_Chr7g0231521 34.404 218 127 4 302 506 35 249 1.31e-34 143
Msa0161380 MtrunA17_Chr4g0040301 41.520 171 99 1 846 1016 379 548 6.68e-36 147
Msa0161380 MtrunA17_Chr4g0040301 30.469 256 153 8 334 570 18 267 1.01e-26 118
Msa0161380 MtrunA17_Chr5g0393461 31.844 358 197 13 284 607 166 510 1.60e-35 147
Msa0161380 MtrunA17_Chr5g0393461 37.572 173 97 3 847 1008 538 710 9.56e-27 119
Msa0161380 MtrunA17_Chr1g0168031 28.616 318 163 10 326 594 534 836 8.34e-25 112
Msa0161380 MtrunA17_Chr1g0168031 35.200 125 79 1 865 987 1005 1129 3.11e-20 97.8
Msa0161380 MtrunA17_Chr2g0281601 40.152 132 79 0 859 990 1144 1275 3.47e-23 107
Msa0161380 MtrunA17_Chr2g0281601 24.422 303 152 9 359 596 665 955 1.44e-13 76.3
Msa0161380 MtrunA17_Chr1g0212331 40.476 126 75 0 865 990 887 1012 5.04e-23 107
Msa0161380 MtrunA17_Chr1g0212331 30.387 181 106 4 428 596 527 699 4.65e-15 80.9
Msa0161380 MtrunA17_Chr4g0024921 36.667 150 90 2 865 1013 784 929 2.52e-22 104
Msa0161380 MtrunA17_Chr7g0255821 28.425 292 168 10 326 589 250 528 1.74e-21 101
Msa0161380 MtrunA17_Chr7g0255821 31.481 216 125 5 779 988 595 793 6.18e-21 99.8
Msa0161380 MtrunA17_Chr1g0190381 36.196 163 90 3 847 995 188 350 2.21e-21 100
Msa0161380 MtrunA17_Chr2g0320751 33.824 136 89 1 856 990 859 994 2.72e-21 101
Msa0161380 MtrunA17_Chr2g0320751 24.855 346 173 10 326 598 398 729 2.66e-20 98.2
Msa0161380 MtrunA17_Chr1g0190391 30.224 268 148 9 258 493 537 797 3.38e-20 97.4
Msa0161380 MtrunA17_Chr4g0069451 28.519 270 166 12 297 552 165 421 4.58e-19 93.6
Msa0161380 MtrunA17_Chr4g0069451 36.000 125 80 0 863 987 486 610 4.31e-17 87.0
Msa0161380 MtrunA17_Chr2g0296421 31.351 185 109 4 802 978 810 984 1.12e-15 82.8
Msa0161380 MtrunA17_Chr4g0047081 33.094 139 87 2 865 997 1054 1192 1.46e-15 82.8
Msa0161380 MtrunA17_Chr7g0225791 33.577 137 85 2 865 995 1104 1240 1.80e-15 82.4
Msa0161380 MtrunA17_Chr2g0320781 33.333 129 80 2 865 987 111 239 2.02e-15 77.8
Msa0161380 MtrunA17_Chr7g0233001 32.374 139 88 2 865 997 339 477 2.12e-15 81.3
Msa0161380 MtrunA17_Chr7g0232991 32.680 153 98 2 848 995 462 614 2.35e-15 81.3
Msa0161380 MtrunA17_Chr7g0232971 30.909 165 107 3 840 997 1090 1254 3.80e-15 81.3
Msa0161380 MtrunA17_Chr1g0149871 47.126 87 44 1 300 386 238 322 3.84e-15 78.6
Msa0161380 MtrunA17_Chr3g0086111 33.043 115 77 0 865 979 552 666 5.28e-15 80.9
Msa0161380 MtrunA17_Chr3g0086111 28.044 271 165 11 297 551 178 434 6.52e-13 73.9
Msa0161380 MtrunA17_Chr7g0233021 32.857 140 84 3 865 997 1052 1188 2.80e-14 78.6
Msa0161380 MtrunA17_Chr8g0352361 34.109 129 80 1 855 978 707 835 2.95e-14 78.2
Msa0161380 MtrunA17_Chr7g0233031 28.070 171 102 4 840 997 1039 1201 1.79e-12 72.4
Msa0161380 MtrunA17_Chr2g0326991 30.137 146 92 4 856 991 15 160 6.67e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161380 AT3G12810.1 65.676 1413 394 24 9 1384 265 1623 0.0 1681
Msa0161380 AT3G12810.2 66.715 1370 366 23 9 1341 261 1577 0.0 1680
Msa0161380 AT3G57300.1 44.915 354 170 6 291 630 573 915 2.67e-89 320
Msa0161380 AT3G57300.1 38.909 275 125 4 763 998 1087 1357 8.96e-48 188
Msa0161380 AT3G57300.4 44.915 354 170 6 291 630 573 915 2.67e-89 320
Msa0161380 AT3G57300.4 38.909 275 125 4 763 998 1087 1357 8.96e-48 188
Msa0161380 AT3G57300.3 44.915 354 170 6 291 630 573 915 3.07e-89 317
Msa0161380 AT3G57300.2 41.344 387 169 7 291 630 573 948 9.37e-85 306
Msa0161380 AT3G57300.2 38.909 275 125 4 763 998 1120 1390 9.28e-48 188
Msa0161380 AT3G06400.2 44.089 313 162 4 285 597 173 472 2.95e-80 288
Msa0161380 AT3G06400.2 54.815 135 60 1 865 998 508 642 1.24e-39 161
Msa0161380 AT3G06400.1 44.089 313 162 4 285 597 173 472 3.05e-80 288
Msa0161380 AT3G06400.1 54.815 135 60 1 865 998 508 642 1.27e-39 161
Msa0161380 AT3G06400.3 44.089 313 162 4 285 597 173 472 3.63e-80 288
Msa0161380 AT3G06400.3 54.815 135 60 1 865 998 508 642 1.32e-39 160
Msa0161380 AT5G18620.1 45.545 303 149 4 299 597 187 477 1.02e-79 286
Msa0161380 AT5G18620.1 53.333 135 62 1 865 998 513 647 1.50e-38 157
Msa0161380 AT5G18620.2 45.545 303 149 4 299 597 187 477 1.04e-79 286
Msa0161380 AT5G18620.2 53.333 135 62 1 865 998 513 647 1.52e-38 157
Msa0161380 AT5G19310.2 43.711 318 166 6 296 607 111 421 1.87e-74 266
Msa0161380 AT5G19310.2 54.430 158 71 1 846 1002 430 587 1.50e-48 187
Msa0161380 AT3G06010.1 44.444 306 166 3 296 597 392 697 2.80e-73 267
Msa0161380 AT3G06010.1 53.503 157 72 1 847 1002 713 869 4.80e-47 185
Msa0161380 AT5G19310.1 43.711 318 166 6 296 607 375 685 6.01e-73 266
Msa0161380 AT5G19310.1 54.777 157 70 1 847 1002 695 851 8.64e-48 187
Msa0161380 AT5G66750.1 37.349 332 184 7 299 608 195 524 4.32e-68 246
Msa0161380 AT5G66750.1 43.455 191 103 2 827 1012 500 690 7.14e-39 157
Msa0161380 AT2G28290.2 41.176 306 162 4 301 594 749 1048 3.37e-66 249
Msa0161380 AT2G28290.2 42.529 174 95 2 829 1001 1059 1228 1.82e-38 158
Msa0161380 AT2G28290.6 41.176 306 162 4 301 594 750 1049 3.41e-66 249
Msa0161380 AT2G28290.6 42.529 174 95 2 829 1001 1060 1229 1.89e-38 158
Msa0161380 AT2G28290.5 41.176 306 162 4 301 594 750 1049 3.42e-66 249
Msa0161380 AT2G28290.5 42.529 174 95 2 829 1001 1060 1229 1.77e-38 158
Msa0161380 AT2G28290.1 41.176 306 162 4 301 594 749 1048 3.51e-66 249
Msa0161380 AT2G28290.1 42.529 174 95 2 829 1001 1059 1228 1.77e-38 158
Msa0161380 AT2G28290.3 41.176 306 162 4 301 594 749 1048 3.56e-66 249
Msa0161380 AT2G28290.3 42.529 174 95 2 829 1001 1059 1228 2.00e-38 158
Msa0161380 AT2G28290.4 41.176 306 162 4 301 594 749 1048 3.56e-66 249
Msa0161380 AT2G28290.4 42.529 174 95 2 829 1001 1059 1228 2.00e-38 158
Msa0161380 AT2G46020.5 40.000 330 169 7 290 594 964 1289 1.03e-61 234
Msa0161380 AT2G46020.5 41.667 168 86 4 835 999 1293 1451 3.66e-27 121
Msa0161380 AT2G46020.1 40.000 330 169 7 290 594 964 1289 1.03e-61 234
Msa0161380 AT2G46020.1 41.667 168 86 4 835 999 1293 1451 3.66e-27 121
Msa0161380 AT2G46020.6 40.000 330 169 7 290 594 964 1289 1.03e-61 234
Msa0161380 AT2G46020.6 41.667 168 86 4 835 999 1293 1451 3.66e-27 121
Msa0161380 AT2G46020.2 39.394 330 172 6 290 594 964 1290 5.41e-61 231
Msa0161380 AT2G46020.2 41.667 168 86 4 835 999 1294 1452 3.37e-27 121
Msa0161380 AT2G46020.3 39.394 330 172 6 290 594 964 1290 5.41e-61 231
Msa0161380 AT2G46020.3 41.667 168 86 4 835 999 1294 1452 3.37e-27 121
Msa0161380 AT2G46020.4 39.394 330 172 6 290 594 964 1290 5.41e-61 231
Msa0161380 AT2G46020.4 41.667 168 86 4 835 999 1294 1452 3.37e-27 121
Msa0161380 AT2G13370.1 37.963 324 181 4 283 596 602 915 1.73e-59 226
Msa0161380 AT2G13370.1 52.564 156 73 1 842 996 934 1089 1.07e-40 165
Msa0161380 AT2G13370.2 37.963 324 181 4 283 596 602 915 1.73e-59 226
Msa0161380 AT2G13370.2 52.564 156 73 1 842 996 934 1089 1.07e-40 165
Msa0161380 AT2G13370.3 37.963 324 181 4 283 596 602 915 1.73e-59 226
Msa0161380 AT2G13370.3 52.564 156 73 1 842 996 934 1089 1.07e-40 165
Msa0161380 AT2G25170.1 37.534 365 178 8 262 601 241 580 1.84e-55 213
Msa0161380 AT2G25170.1 44.390 205 106 4 846 1047 594 793 2.27e-40 164
Msa0161380 AT2G25170.4 37.534 365 178 8 262 601 241 580 1.84e-55 213
Msa0161380 AT2G25170.4 44.390 205 106 4 846 1047 594 793 2.27e-40 164
Msa0161380 AT2G25170.2 37.534 365 178 8 262 601 258 597 2.06e-55 213
Msa0161380 AT2G25170.2 44.390 205 106 4 846 1047 611 810 2.36e-40 164
Msa0161380 AT2G02090.1 37.135 342 163 10 306 613 213 536 2.37e-55 207
Msa0161380 AT2G02090.1 55.263 152 68 0 847 998 588 739 3.63e-45 176
Msa0161380 AT2G25170.3 37.534 365 178 8 262 601 267 606 3.21e-55 212
Msa0161380 AT2G25170.3 44.390 205 106 4 846 1047 620 819 2.50e-40 164
Msa0161380 AT4G31900.2 39.744 312 155 8 299 598 177 467 3.98e-51 198
Msa0161380 AT4G31900.2 50.667 150 73 1 847 995 483 632 8.34e-38 155
Msa0161380 AT4G31900.1 39.744 312 155 8 299 598 218 508 5.67e-51 198
Msa0161380 AT4G31900.1 50.667 150 73 1 847 995 524 673 8.61e-38 155
Msa0161380 AT4G31900.3 39.744 312 155 8 299 598 218 508 5.91e-51 197
Msa0161380 AT4G31900.3 50.667 150 73 1 847 995 524 673 9.06e-38 155
Msa0161380 AT5G44800.1 37.217 309 166 5 305 597 688 984 1.07e-47 188
Msa0161380 AT5G44800.1 46.842 190 96 4 847 1032 1004 1192 5.24e-40 163
Msa0161380 AT2G44980.3 34.277 318 186 6 300 597 45 359 2.04e-45 178
Msa0161380 AT2G44980.3 46.875 160 74 1 847 995 376 535 4.31e-36 149
Msa0161380 AT3G54280.1 34.251 327 180 7 302 597 1447 1769 3.75e-44 177
Msa0161380 AT3G54280.1 39.623 159 93 1 864 1019 1831 1989 2.92e-30 131
Msa0161380 AT3G54280.2 34.251 327 180 7 302 597 1478 1800 4.92e-44 176
Msa0161380 AT3G54280.2 39.623 159 93 1 864 1019 1862 2020 3.70e-30 131
Msa0161380 AT2G18760.4 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.4 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.1 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.1 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.2 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.2 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.7 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.7 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.5 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.5 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.6 33.333 339 181 10 298 596 377 710 1.47e-43 174
Msa0161380 AT2G18760.6 42.012 169 97 1 846 1014 726 893 5.27e-36 149
Msa0161380 AT2G18760.3 33.837 331 174 10 306 596 444 769 2.09e-43 174
Msa0161380 AT2G18760.3 42.262 168 96 1 847 1014 786 952 6.36e-36 149
Msa0161380 AT2G44980.2 33.856 319 187 7 300 597 45 360 2.34e-43 172
Msa0161380 AT2G44980.2 46.875 160 74 1 847 995 377 536 3.94e-36 149
Msa0161380 AT2G44980.1 34.505 313 184 8 300 597 45 351 6.80e-43 170
Msa0161380 AT2G44980.1 50.000 150 74 1 847 995 368 517 2.31e-37 153
Msa0161380 AT5G63950.1 30.026 383 227 10 280 628 350 725 3.50e-40 163
Msa0161380 AT5G63950.1 38.095 168 103 1 848 1015 733 899 6.60e-29 126
Msa0161380 AT1G03750.1 32.192 292 179 5 299 574 132 420 1.97e-39 159
Msa0161380 AT1G03750.1 39.766 171 102 1 846 1016 527 696 1.81e-34 144
Msa0161380 AT5G63950.2 30.189 371 225 9 280 628 350 708 1.10e-36 151
Msa0161380 AT5G63950.2 38.095 168 103 1 848 1015 716 882 6.32e-29 126
Msa0161380 AT3G19210.1 31.940 335 196 13 301 607 176 506 7.82e-35 145
Msa0161380 AT3G19210.1 35.593 177 108 3 847 1017 534 710 8.26e-26 116
Msa0161380 AT3G19210.3 31.940 335 196 13 301 607 176 506 8.47e-35 144
Msa0161380 AT3G19210.3 38.000 150 91 2 847 994 534 683 8.03e-26 115
Msa0161380 AT3G19210.2 30.539 334 200 13 301 607 176 504 5.13e-31 132
Msa0161380 AT3G19210.2 35.593 177 108 3 847 1017 532 708 8.67e-26 116
Msa0161380 AT1G08600.4 30.655 336 193 11 296 594 709 1041 6.07e-28 123
Msa0161380 AT1G08600.4 36.810 163 89 2 847 995 1115 1277 1.13e-21 103
Msa0161380 AT1G08600.3 30.655 336 193 11 296 594 709 1041 6.07e-28 123
Msa0161380 AT1G08600.3 36.810 163 89 2 847 995 1115 1277 1.13e-21 103
Msa0161380 AT1G08600.2 30.655 336 193 11 296 594 709 1041 6.07e-28 123
Msa0161380 AT1G08600.2 36.810 163 89 2 847 995 1115 1277 1.13e-21 103
Msa0161380 AT5G43530.1 30.124 322 164 11 326 598 682 991 1.51e-27 122
Msa0161380 AT5G43530.1 30.986 213 128 5 797 990 1043 1255 9.74e-25 113
Msa0161380 AT1G08600.1 31.481 324 185 11 296 594 709 1020 9.62e-27 119
Msa0161380 AT1G08600.1 36.810 163 89 2 847 995 1094 1256 9.18e-22 103
Msa0161380 AT1G11100.1 27.654 358 181 10 301 592 537 882 1.29e-25 115
Msa0161380 AT1G11100.1 42.969 128 73 0 863 990 1071 1198 1.51e-24 112
Msa0161380 AT1G11100.5 27.654 358 181 10 301 592 394 739 2.65e-25 114
Msa0161380 AT1G11100.5 42.969 128 73 0 863 990 928 1055 1.23e-24 112
Msa0161380 AT1G11100.3 42.969 128 73 0 863 990 972 1099 1.36e-24 112
Msa0161380 AT1G11100.3 25.871 402 176 12 301 592 394 783 2.78e-21 101
Msa0161380 AT1G11100.2 42.969 128 73 0 863 990 1114 1241 1.50e-24 112
Msa0161380 AT1G11100.2 25.622 402 177 12 301 592 536 925 1.43e-21 102
Msa0161380 AT1G11100.4 42.969 128 73 0 863 990 1115 1242 1.61e-24 112
Msa0161380 AT1G11100.4 25.622 402 177 12 301 592 537 926 1.49e-21 102
Msa0161380 AT5G22750.1 28.655 342 162 13 326 598 414 742 1.75e-24 112
Msa0161380 AT5G22750.1 36.029 136 86 1 856 990 872 1007 8.01e-24 110
Msa0161380 AT1G61140.1 40.152 132 79 0 859 990 1119 1250 1.95e-23 108
Msa0161380 AT1G61140.1 25.163 306 149 9 359 597 668 960 1.80e-16 86.3
Msa0161380 AT1G61140.3 40.152 132 79 0 859 990 961 1092 2.28e-23 108
Msa0161380 AT1G61140.3 25.163 306 149 9 359 597 510 802 3.89e-16 85.1
Msa0161380 AT1G05120.1 39.024 123 75 0 865 987 682 804 1.73e-22 105
Msa0161380 AT1G05120.2 39.024 123 75 0 865 987 725 847 1.92e-22 105
Msa0161380 AT5G05130.1 37.405 131 78 2 865 992 727 856 1.33e-21 102
Msa0161380 AT5G05130.1 29.752 242 150 6 359 590 361 592 2.71e-19 95.1
Msa0161380 AT3G16600.1 27.485 342 177 10 299 597 46 359 1.66e-21 101
Msa0161380 AT3G16600.1 43.836 73 41 0 918 990 510 582 5.53e-12 70.9
Msa0161380 AT3G20010.3 38.889 126 77 0 865 990 628 753 2.92e-21 101
Msa0161380 AT3G20010.3 29.282 181 108 4 428 596 276 448 1.17e-12 73.2
Msa0161380 AT3G20010.2 38.889 126 77 0 865 990 603 728 3.10e-21 100
Msa0161380 AT3G20010.2 29.282 181 108 4 428 596 251 423 9.06e-13 73.6
Msa0161380 AT1G02670.6 37.302 126 79 0 865 990 512 637 3.45e-21 100
Msa0161380 AT1G02670.6 28.363 342 193 12 299 594 89 424 2.34e-18 91.7
Msa0161380 AT1G02670.3 37.302 126 79 0 865 990 539 664 4.11e-21 100
Msa0161380 AT1G02670.3 28.363 342 193 12 299 594 116 451 4.00e-18 90.9
Msa0161380 AT3G20010.1 38.889 126 77 0 865 990 894 1019 6.29e-21 100
Msa0161380 AT3G20010.1 28.421 190 116 4 419 596 533 714 1.10e-12 73.6
Msa0161380 AT3G20010.5 38.889 126 77 0 865 990 894 1019 6.29e-21 100
Msa0161380 AT3G20010.5 28.421 190 116 4 419 596 533 714 1.10e-12 73.6
Msa0161380 AT3G20010.7 38.889 126 77 0 865 990 894 1019 6.29e-21 100
Msa0161380 AT3G20010.7 28.421 190 116 4 419 596 533 714 1.10e-12 73.6
Msa0161380 AT1G02670.1 37.302 126 79 0 865 990 527 652 7.23e-21 99.8
Msa0161380 AT1G02670.1 26.888 331 189 12 299 594 127 439 1.36e-14 79.3
Msa0161380 AT1G02670.7 37.302 126 79 0 865 990 516 641 7.52e-21 99.8
Msa0161380 AT1G02670.7 26.888 331 189 12 299 594 116 428 1.57e-14 79.3
Msa0161380 AT1G50410.2 36.508 126 80 0 865 990 828 953 2.62e-19 95.1
Msa0161380 AT1G50410.2 28.947 190 115 4 419 596 462 643 1.67e-15 82.8
Msa0161380 AT1G50410.1 36.508 126 80 0 865 990 828 953 2.62e-19 95.1
Msa0161380 AT1G50410.1 28.947 190 115 4 419 596 462 643 1.67e-15 82.8
Msa0161380 AT1G50410.3 36.508 126 80 0 865 990 828 953 2.62e-19 95.1
Msa0161380 AT1G50410.3 28.947 190 115 4 419 596 462 643 1.67e-15 82.8
Msa0161380 AT1G48310.4 28.253 269 168 10 297 552 163 419 4.25e-19 93.2
Msa0161380 AT1G02670.4 28.696 345 188 14 299 594 116 451 2.60e-18 90.9
Msa0161380 AT1G02670.5 28.363 342 193 12 299 594 89 424 3.29e-18 90.9
Msa0161380 AT1G02670.5 35.577 104 67 0 865 968 512 615 1.21e-16 85.9
Msa0161380 AT1G02670.2 28.363 342 193 12 299 594 116 451 6.79e-18 90.1
Msa0161380 AT1G02670.2 35.577 104 67 0 865 968 539 642 1.50e-16 85.5
Msa0161380 AT1G48310.1 37.405 131 80 1 863 993 484 612 2.18e-17 88.6
Msa0161380 AT1G48310.2 37.405 131 80 1 863 993 489 617 2.27e-17 88.6
Msa0161380 AT1G48310.3 37.405 131 80 1 863 993 484 612 3.00e-17 87.8
Msa0161380 AT1G05490.1 28.049 246 148 7 763 995 1124 1353 3.07e-16 85.5
Msa0161380 AT1G61140.2 25.163 306 149 9 359 597 675 967 4.00e-16 84.7
Msa0161380 AT5G07810.1 33.043 115 77 0 865 979 556 670 5.56e-16 84.3
Msa0161380 AT5G07810.1 25.092 271 174 10 314 567 209 467 3.03e-13 75.5
Msa0161380 AT1G50410.4 28.947 190 115 4 419 596 462 643 1.39e-15 82.8
Msa0161380 AT2G16390.2 36.434 129 77 1 855 978 705 833 5.01e-15 81.3
Msa0161380 AT2G16390.1 36.434 129 77 1 855 978 702 830 5.49e-15 80.9
Msa0161380 AT2G21450.2 32.374 139 89 1 845 978 625 763 1.96e-13 75.9
Msa0161380 AT2G21450.1 32.374 139 89 1 845 978 618 756 2.28e-13 75.9
Msa0161380 AT2G21450.3 32.374 139 89 1 845 978 527 665 2.90e-13 75.1
Msa0161380 AT3G20010.4 28.421 190 116 4 419 596 533 714 8.18e-13 73.9
Msa0161380 AT3G20010.6 28.421 190 116 4 419 596 533 714 8.18e-13 73.9
Msa0161380 AT3G20010.8 28.421 190 116 4 419 596 533 714 8.18e-13 73.9
Msa0161380 AT3G24340.1 27.941 204 133 5 802 997 886 1083 2.19e-12 72.8

Find 284 sgRNAs with CRISPR-Local

Find 571 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATGAAAAGAAAATATT+TGG 0.140396 1_4:+36657530 None:intergenic
TTCATTCTCTTTATTCAAAT+TGG 0.151537 1_4:+36656966 None:intergenic
CTTCCAGTTCACGTGTCTTC+AGG 0.176990 1_4:+36657094 None:intergenic
CCAGTCACACCAAGAGTTTA+AGG 0.187139 1_4:-36658813 Msa0161380:CDS
AAGGCTGCTTTATCTATAAT+TGG 0.193759 1_4:+36656748 None:intergenic
AAGAGATTCAAAAGGCAATT+TGG 0.194675 1_4:-36658193 Msa0161380:CDS
GACCCCTGCAACTTTAATTA+TGG 0.221069 1_4:-36658297 Msa0161380:CDS
CCATTGGTTTCTTTGCAATT+AGG 0.230447 1_4:-36662804 Msa0161380:CDS
CTCCTCATCTTCGTCAATTT+CGG 0.247016 1_4:+36656651 None:intergenic
CAACTAGTGTGATGCTTAAC+TGG 0.251687 1_4:-36659180 Msa0161380:CDS
GAGAATGAATTAATGTTAAA+TGG 0.259210 1_4:-36656952 Msa0161380:CDS
CCATCTACTCAACGACTCTA+AGG 0.298159 1_4:-36658094 Msa0161380:CDS
TTCTTTGCAATTAGGAGAAT+TGG 0.302574 1_4:-36662796 Msa0161380:CDS
TTGCCTGCGAAAAGGGGATT+TGG 0.302669 1_4:-36659225 Msa0161380:CDS
CTTCGTGAATATCAACATAT+TGG 0.302788 1_4:-36659352 Msa0161380:CDS
CTCCTTTGCGCTTCCGAAAT+AGG 0.305575 1_4:+36659114 None:intergenic
GCGGAAGCTGCAGCTGCAGC+TGG 0.311941 1_4:-36656847 Msa0161380:CDS
ATCCTTTGAAATCGTTCAAC+TGG 0.312093 1_4:+36657969 None:intergenic
AGCTGCAGCTGCAGCTGGAC+AGG 0.313050 1_4:-36656842 Msa0161380:CDS
TACAGTCGACTTAGAAGGTT+TGG 0.315070 1_4:-36658387 Msa0161380:CDS
TGGCTTCTTCTGTAAATTCC+TGG 0.315444 1_4:+36657058 None:intergenic
CAGAAACTTCTCCACTGTTC+TGG 0.319642 1_4:+36657178 None:intergenic
CACTAATCAATCGATATATA+TGG 0.322292 1_4:+36657373 None:intergenic
TGCCTGCGAAAAGGGGATTT+GGG 0.323718 1_4:-36659224 Msa0161380:CDS
GTCCGGGCTTAATTACTTCC+AGG 0.324744 1_4:+36658255 None:intergenic
AAGATGAAAAGAAAATATTT+GGG 0.325700 1_4:+36657531 None:intergenic
TATACTTACATGCGCTTAGA+TGG 0.326385 1_4:-36657606 Msa0161380:CDS
GATGGGAACAAGTATGAAAC+AGG 0.336004 1_4:+36658017 None:intergenic
CGAATGGCGTATCGGTCAAT+AGG 0.337918 1_4:+36656790 None:intergenic
AACTTATAGATTAGTTATTC+AGG 0.338884 1_4:-36659035 Msa0161380:CDS
ACTGCTTGCAAGGTATAAAA+AGG 0.340721 1_4:-36659794 Msa0161380:intron
GAGCATCCCCTCCTGTTTGC+TGG 0.345720 1_4:-36657902 Msa0161380:CDS
TAATTATGGAACGCACTGAT+AGG 0.348701 1_4:-36658283 Msa0161380:CDS
GAAGCCTTCATTAATTTGTA+TGG 0.352575 1_4:-36657630 Msa0161380:CDS
GGAGGGGATGCTCGGGCGGC+AGG 0.360742 1_4:+36657912 None:intergenic
TATGAATTCCGGTGAGAAAC+TGG 0.361750 1_4:-36659554 Msa0161380:CDS
TGAAGATGAGGCAGATTATA+TGG 0.364463 1_4:-36657118 Msa0161380:CDS
AGAGATTCAAAAGGCAATTT+GGG 0.365009 1_4:-36658192 Msa0161380:CDS
ATACTTGTTCCCATCAAAAC+TGG 0.365802 1_4:-36658009 Msa0161380:CDS
CCTTAGAGTCGTTGAGTAGA+TGG 0.373656 1_4:+36658094 None:intergenic
GCACATCTTGCCTGCGAAAA+GGG 0.375929 1_4:-36659232 Msa0161380:CDS
TTTAGGACCTGAGTGATGAT+TGG 0.376586 1_4:-36659687 Msa0161380:intron
CGATTGGACGGCCCTCAAAT+AGG 0.377740 1_4:+36658489 None:intergenic
TAGCGCTTAACCTCATCCTT+TGG 0.379977 1_4:+36659958 None:intergenic
AATTGTATAAGTCGCCTGTC+TGG 0.383177 1_4:+36657759 None:intergenic
CTTTCTGCTTAGCATTATCA+TGG 0.383481 1_4:+36659602 None:intergenic
GGATCGCATTGAAAGGTATA+AGG 0.388125 1_4:-36656686 Msa0161380:CDS
CTTTAAGAAGCTTGATCCTA+TGG 0.389844 1_4:-36657256 Msa0161380:CDS
CAAGATCGGTGCCACAGAAT+TGG 0.392741 1_4:-36657411 Msa0161380:CDS
ATCATATACAGGATGCCTTA+TGG 0.398388 1_4:+36658061 None:intergenic
CCACTCTGTGTCCTCAATCC+TGG 0.398457 1_4:+36656714 None:intergenic
AAAACCAATCCTTAAACTCT+TGG 0.398568 1_4:+36658804 None:intergenic
ACAGACCCAGGCAGAAGAGC+AGG 0.398583 1_4:-36659524 Msa0161380:CDS
TGAGGACACAGAGTGGGAAT+TGG 0.398703 1_4:-36656707 Msa0161380:CDS
TTGACTATAGCATGACATCT+TGG 0.402054 1_4:-36658346 Msa0161380:CDS
ACTTGCCGACGAACAATTGC+GGG 0.402828 1_4:+36657789 None:intergenic
ATGACATGCTCATGTTTCAT+TGG 0.402879 1_4:+36658656 None:intergenic
CCCTCGACCATTCCTGATAT+AGG 0.403985 1_4:+36658776 None:intergenic
TTAGGACCTGAGTGATGATT+GGG 0.408479 1_4:-36659686 Msa0161380:intron
TCTTCATCCACAGAAATATC+AGG 0.409091 1_4:+36659577 None:intergenic
TGTAATTATTGCGACGTAAG+AGG 0.412071 1_4:+36654934 None:intergenic
CCTTAAACTCTTGGTGTGAC+TGG 0.412769 1_4:+36658813 None:intergenic
TTCCAGTTCACGTGTCTTCA+GGG 0.414951 1_4:+36657095 None:intergenic
TTTGTTTGGCACAGAGGATA+AGG 0.415459 1_4:-36661008 Msa0161380:intron
CTTCAAAATATTCTCCTCAA+TGG 0.418249 1_4:+36657344 None:intergenic
CGTTCCATAATTAAAGTTGC+AGG 0.419070 1_4:+36658293 None:intergenic
TTGGCAGATGAAATGGGGCT+TGG 0.422618 1_4:-36659283 Msa0161380:CDS
TGCACATCTTGCCTGCGAAA+AGG 0.423965 1_4:-36659233 Msa0161380:CDS
AACTGGTGATCCTGATGGTC+AGG 0.426481 1_4:-36662721 Msa0161380:CDS
ATGCACACATGAAATGAGTT+TGG 0.426857 1_4:+36659061 None:intergenic
GGTCTGCCTCTCCTCTGGTT+GGG 0.427390 1_4:+36657578 None:intergenic
ATATATGGACTTCACGCGTC+TGG 0.433446 1_4:+36657388 None:intergenic
TGGATCATTTATTATGCCAT+TGG 0.433995 1_4:-36662820 None:intergenic
GCAAACAGGAGGGGATGCTC+GGG 0.436317 1_4:+36657905 None:intergenic
AAAGTGGAAATACTTGATCT+TGG 0.437245 1_4:-36658990 Msa0161380:CDS
AGAGGCCTTGGCTCAACATC+AGG 0.438853 1_4:-36656121 Msa0161380:intron
GGCTTGGGCTTTGACTCACT+TGG 0.441629 1_4:+36655680 None:intergenic
ATTCGACTGTGGAAAATTGC+AGG 0.441643 1_4:-36657739 Msa0161380:CDS
GGCCCTGAAGACACGTGAAC+TGG 0.445365 1_4:-36657097 Msa0161380:CDS
TGCTTAGCATTATCATGGAC+TGG 0.445788 1_4:+36659607 None:intergenic
TGACTATAGCATGACATCTT+GGG 0.446897 1_4:-36658345 Msa0161380:CDS
AGCAAACAGGAGGGGATGCT+CGG 0.447885 1_4:+36657904 None:intergenic
AAGCAAAGCTATAGTCATAA+TGG 0.448738 1_4:+36659255 None:intergenic
TCATCTTGTCAACTCGTAGT+GGG 0.452307 1_4:-36657515 Msa0161380:CDS
CTTGCAAGCAGTTCCTCAAC+AGG 0.453098 1_4:+36659805 None:intergenic
TAATCATCCTGACCTATTTG+AGG 0.453483 1_4:-36658501 Msa0161380:CDS
ATCCAACTCGTTAGATATGC+AGG 0.456278 1_4:-36655384 Msa0161380:CDS
GCAAGTTCTTCCTGACCATC+AGG 0.456592 1_4:+36662711 None:intergenic
TGAATATCAACATATTGGAT+TGG 0.456940 1_4:-36659347 Msa0161380:CDS
ATCAGATCCATATAAAAGTC+TGG 0.457731 1_4:-36655348 Msa0161380:CDS
ATTAAGGTCTGCCTCTCCTC+TGG 0.460440 1_4:+36657573 None:intergenic
AGAGAGTACTTGAGTAGAAA+GGG 0.461090 1_4:+36659373 None:intergenic
AGGTCTGCCTCTCCTCTGGT+TGG 0.462769 1_4:+36657577 None:intergenic
GATGTCAATAAGATCCCTCT+TGG 0.464033 1_4:+36655424 None:intergenic
AAAGCGCGCACTTGATGATC+TGG 0.465332 1_4:-36657310 Msa0161380:CDS
ACAGTCGACTTAGAAGGTTT+GGG 0.467295 1_4:-36658386 Msa0161380:CDS
TTCTAAGTCGACTGTAGAAA+AGG 0.468844 1_4:+36658394 None:intergenic
AAGAGAGTACTTGAGTAGAA+AGG 0.469951 1_4:+36659372 None:intergenic
GCGGGTAGTTTATCTTCGTT+AGG 0.471821 1_4:+36656922 None:intergenic
GAACTTGGAGACACAAAATC+AGG 0.473469 1_4:+36655527 None:intergenic
CCACCATCTTCACTACTCTC+TGG 0.476131 1_4:+36662756 None:intergenic
CGAACAATTGCGGGCCTGAT+GGG 0.479869 1_4:+36657798 None:intergenic
CTCTTCTGCCTGGGTCTGTA+CGG 0.480627 1_4:+36659528 None:intergenic
TTCAGAGGAAAGAGAAAGTG+AGG 0.482094 1_4:-36659482 Msa0161380:CDS
TGAAAGGTATAAGGAGGAGA+TGG 0.483463 1_4:-36656677 Msa0161380:CDS
GCAAGATCAGTACAACCAAC+TGG 0.483944 1_4:-36659433 Msa0161380:CDS
AATCATCCTGACCTATTTGA+GGG 0.484772 1_4:-36658500 Msa0161380:CDS
GTGGATGAAGATATGAATTC+CGG 0.486638 1_4:-36659565 Msa0161380:CDS
AATTATAGATAAAGCAGCCT+TGG 0.488349 1_4:-36656746 Msa0161380:CDS
ATCAGGAATGGTCGAGGGAG+AGG 0.489334 1_4:-36658771 Msa0161380:CDS
CCTGAGTGATGATTGGGATC+AGG 0.489815 1_4:-36659680 Msa0161380:CDS
ATCAACATATTGGATTGGAT+TGG 0.492254 1_4:-36659342 Msa0161380:CDS
CACCACTATTGTCACCCATC+AGG 0.495991 1_4:-36657812 Msa0161380:CDS
ACGAACAATTGCGGGCCTGA+TGG 0.496167 1_4:+36657797 None:intergenic
GGGAGACTGAATTTCTGAAA+TGG 0.496319 1_4:-36659159 Msa0161380:CDS
GAATGGCGTATCGGTCAATA+GGG 0.496383 1_4:+36656791 None:intergenic
AAACGACGAATTCTGTTGAC+TGG 0.498010 1_4:-36658902 Msa0161380:CDS
GGTGTTGGTATCAATCTAGT+TGG 0.500481 1_4:-36657492 Msa0161380:CDS
TGAGCTTGTTGATCCATAGC+AGG 0.500529 1_4:+36657432 None:intergenic
GGTGGACAAATAGTTAGAAC+TGG 0.505190 1_4:-36662738 Msa0161380:CDS
TGTGTTAAAACGCTGCATTA+AGG 0.505997 1_4:+36657557 None:intergenic
AATTATGGAACGCACTGATA+GGG 0.506728 1_4:-36658282 Msa0161380:CDS
CATGTCAACATCATCATCCT+TGG 0.507537 1_4:+36656891 None:intergenic
ATTAGGAGAATTGGCAAGGC+AGG 0.510929 1_4:-36662787 Msa0161380:CDS
TCATCCTTGGCAACAACAGC+GGG 0.512844 1_4:+36656904 None:intergenic
CATGGACTGGTGAATTCTGC+TGG 0.515645 1_4:+36659620 None:intergenic
ATCCTGCATATCTAACGAGT+TGG 0.516168 1_4:+36655382 None:intergenic
CTTGGTGTGACTGGAAAACA+TGG 0.517263 1_4:+36658822 None:intergenic
AAGAAAGGATCTCTAACCTC+TGG 0.519036 1_4:-36655620 Msa0161380:CDS
TCGTCAGCAAGTAGAGGCCT+TGG 0.519193 1_4:-36656133 Msa0161380:CDS
ATTGTATAAGTCGCCTGTCT+GGG 0.520548 1_4:+36657760 None:intergenic
AACGACTCCAGCACGGTCCT+CGG 0.521854 1_4:-36662536 Msa0161380:CDS
ATATGAAGCTAAACTGAAAG+AGG 0.523809 1_4:-36655987 Msa0161380:CDS
CCTCTAGTATGTGCAAATCA+AGG 0.523995 1_4:-36660369 Msa0161380:CDS
CAGTTAAGCATCACACTAGT+TGG 0.524941 1_4:+36659181 None:intergenic
GGCAAGTATATTTCCCAGAC+AGG 0.525217 1_4:-36657773 Msa0161380:CDS
CTACATCTCTCTTCAATCGA+CGG 0.525559 1_4:+36658690 None:intergenic
GGACGGCCCTCAAATAGGTC+AGG 0.526203 1_4:+36658494 None:intergenic
CTTAGAGTCGTTGAGTAGAT+GGG 0.529412 1_4:+36658095 None:intergenic
TTCATCTTGTCAACTCGTAG+TGG 0.529675 1_4:-36657516 Msa0161380:CDS
AAGTTCAAATCTCTGAAGAA+AGG 0.531787 1_4:-36655635 Msa0161380:CDS
AACAGGAGGGGATGCTCGGG+CGG 0.531818 1_4:+36657908 None:intergenic
GGTCAGGAAGAACTTGCATC+AGG 0.533174 1_4:-36662705 Msa0161380:intron
CACACCAAGAGTTTAAGGAT+TGG 0.533280 1_4:-36658808 Msa0161380:CDS
AGCATTGCTGCTTGTAAGAT+GGG 0.533774 1_4:+36657847 None:intergenic
TAAGGGACCTTGTTACCATA+AGG 0.534393 1_4:-36658076 Msa0161380:CDS
CATCTTGTCAACTCGTAGTG+GGG 0.534459 1_4:-36657514 Msa0161380:CDS
ATCCTCTTCAAGTCTCCCAC+TGG 0.534643 1_4:+36657038 None:intergenic
CTAGAAAACGAATGGCGTAT+CGG 0.534897 1_4:+36656782 None:intergenic
ATGATCTGGTTATACAGAGT+GGG 0.535035 1_4:-36657296 Msa0161380:CDS
GAGCATTGCTGCTTGTAAGA+TGG 0.535292 1_4:+36657846 None:intergenic
ACGTCGACCGAGGACCGTGC+TGG 0.537347 1_4:+36662529 None:intergenic
AAAAGGCAATTTGGGAAGAG+AGG 0.537713 1_4:-36658184 Msa0161380:CDS
CAGACCCAGGCAGAAGAGCA+GGG 0.538647 1_4:-36659523 Msa0161380:CDS
TCCTATATCAGGAATGGTCG+AGG 0.539042 1_4:-36658777 Msa0161380:CDS
TGACCTGAAAATAGTTCCAT+AGG 0.539466 1_4:+36657240 None:intergenic
CTGAGGAAATTAAAATCAGA+AGG 0.540929 1_4:-36657702 Msa0161380:CDS
AAGTCTAAATTAACAGCTGA+TGG 0.540969 1_4:-36655482 Msa0161380:CDS
TACTTGCCGACGAACAATTG+CGG 0.541577 1_4:+36657788 None:intergenic
CACATCTTGCCTGCGAAAAG+GGG 0.542176 1_4:-36659231 Msa0161380:CDS
AATCCTGGCTTCAGATTCCA+AGG 0.543191 1_4:+36656729 None:intergenic
ACCACTACAGAATGATCTCA+TGG 0.543452 1_4:-36658876 Msa0161380:CDS
AGAGAGGATAAGAGAGGCAA+AGG 0.544737 1_4:-36658168 Msa0161380:CDS
AGTCCAGAGAGTAGTGAAGA+TGG 0.545279 1_4:-36662759 Msa0161380:CDS
ACGCACTGATAGGGCTGACC+TGG 0.546818 1_4:-36658273 Msa0161380:CDS
TTGGGGTCCACATCTAATTG+TGG 0.547069 1_4:-36659206 Msa0161380:CDS
GATGATGAGCCTCAAGAGTT+GGG 0.547322 1_4:-36657000 Msa0161380:CDS
TGCAATTGATCCAAAGGATG+AGG 0.547790 1_4:-36659968 Msa0161380:intron
TATCATCATGCAACTTCGCA+AGG 0.549852 1_4:-36658528 Msa0161380:CDS
ATATCAAAAGAACTGACGAT+TGG 0.552321 1_4:+36658473 None:intergenic
GGAAGAAGCTGTGGATAACC+AGG 0.553871 1_4:-36657076 Msa0161380:CDS
TCCTTTGAAATCGTTCAACT+GGG 0.554427 1_4:+36657970 None:intergenic
AAATAATCTATCTCAAAATG+AGG 0.555369 1_4:-36662388 Msa0161380:CDS
TGCAATTAGGAGAATTGGCA+AGG 0.556813 1_4:-36662791 Msa0161380:CDS
TTGCAATCCTATATCAGGAA+TGG 0.559424 1_4:-36658783 Msa0161380:CDS
GACCTGGAAGTAATTAAGCC+CGG 0.561095 1_4:-36658257 Msa0161380:CDS
CAGCCTTGGAATCTGAAGCC+AGG 0.561251 1_4:-36656732 Msa0161380:CDS
GGATGATGAGCCTCAAGAGT+TGG 0.565347 1_4:-36657001 Msa0161380:CDS
GGAATCTGAAGCCAGGATTG+AGG 0.568406 1_4:-36656725 Msa0161380:CDS
GATTAGTGAGAGCACCATTG+AGG 0.568442 1_4:-36657358 Msa0161380:CDS
CCCCAGTTGAACGATTTCAA+AGG 0.570372 1_4:-36657971 Msa0161380:CDS
GGATGATGATGTTGACATGC+TGG 0.570560 1_4:-36656887 Msa0161380:CDS
TACGGTAGCCAGTTTCTCAC+CGG 0.570701 1_4:+36659546 None:intergenic
ATAACCATACAAATTAATGA+AGG 0.571420 1_4:+36657626 None:intergenic
GTAGGCTGTCAAAGAGGCAG+AGG 0.571976 1_4:-36658628 Msa0161380:CDS
GACCTATTTCGGAAGCGCAA+AGG 0.572941 1_4:-36659116 Msa0161380:CDS
CAGGATGCCTTATGGTAACA+AGG 0.574008 1_4:+36658069 None:intergenic
TAGTGACTGGAATCCTGCTA+TGG 0.574600 1_4:-36657445 Msa0161380:CDS
GTTCCATAATTAAAGTTGCA+GGG 0.574688 1_4:+36658294 None:intergenic
CACGCGTCTGGCCAATTCTG+TGG 0.575321 1_4:+36657400 None:intergenic
AGTTGATGCAATTGATCCAA+AGG 0.576115 1_4:-36659974 Msa0161380:CDS
AGACCCAGGCAGAAGAGCAG+GGG 0.577455 1_4:-36659522 Msa0161380:CDS
ATATGATATTCATCAAAAGA+AGG 0.577869 1_4:-36658045 Msa0161380:CDS
AGAGAGTGACATGCCTGTTG+AGG 0.578287 1_4:-36659818 Msa0161380:CDS
TGGATCAACAAGCTCAAGAT+CGG 0.578943 1_4:-36657425 Msa0161380:CDS
GCCTGCGAAAAGGGGATTTG+GGG 0.579354 1_4:-36659223 Msa0161380:CDS
AATGTTCGTGTAGTTAATGG+AGG 0.579418 1_4:-36656017 Msa0161380:intron
ATTAAAACATGTTGAAGATG+AGG 0.583637 1_4:-36657130 Msa0161380:CDS
ATGAAATATTGTCAGGAAGA+CGG 0.584887 1_4:-36661037 Msa0161380:intron
TCATCGTCATCTATGACCAT+TGG 0.585367 1_4:+36655563 None:intergenic
CCTGATCCCAATCATCACTC+AGG 0.585607 1_4:+36659680 None:intergenic
TTCAATCGACGGAGTAAGAA+CGG 0.594328 1_4:+36658701 None:intergenic
CTGTTGAGGAACTGCTTGCA+AGG 0.596463 1_4:-36659804 Msa0161380:CDS
ACTACCCGCTGTTGTTGCCA+AGG 0.597271 1_4:-36656908 Msa0161380:CDS
GGCCTGATGGGTGACAATAG+TGG 0.597345 1_4:+36657810 None:intergenic
GGGAATTGGATCGCATTGAA+AGG 0.597610 1_4:-36656693 Msa0161380:CDS
TTACTGCACCAGCAAACAGG+AGG 0.599008 1_4:+36657894 None:intergenic
CATCTACTCAACGACTCTAA+GGG 0.599231 1_4:-36658093 Msa0161380:CDS
AACGTGCAGCAGCTATTGCA+TGG 0.599362 1_4:-36658145 Msa0161380:CDS
ATCTTGTCAACTCGTAGTGG+GGG 0.601376 1_4:-36657513 Msa0161380:CDS
AACTTACACAACGTCGACCG+AGG 0.601690 1_4:+36662519 None:intergenic
TCGACTGTAGAAAAGGAGCT+AGG 0.601832 1_4:+36658401 None:intergenic
ATGAGCATGTCATATACTGT+AGG 0.602018 1_4:-36658646 Msa0161380:CDS
TTGCATGGTGGAACTCCTTG+AGG 0.602296 1_4:-36658130 Msa0161380:CDS
AGCCGAAATTGACGAAGATG+AGG 0.602402 1_4:-36656653 Msa0161380:CDS
GTTAGAACTGGTGATCCTGA+TGG 0.603273 1_4:-36662726 Msa0161380:CDS
ACAGATTCACCCAACTCTTG+AGG 0.603569 1_4:+36656991 None:intergenic
AACTAGTGTGATGCTTAACT+GGG 0.603966 1_4:-36659179 Msa0161380:CDS
CCTAATTGCAAAGAAACCAA+TGG 0.604881 1_4:+36662804 None:intergenic
AAAGGAGCTAGGCAAAAGCA+TGG 0.605630 1_4:+36658412 None:intergenic
CAAAAGAACTGACGATTGGA+CGG 0.606699 1_4:+36658477 None:intergenic
AATGAATTAATGTTAAATGG+AGG 0.606945 1_4:-36656949 Msa0161380:CDS
AAAATTGGAAATCACAAAGG+TGG 0.607113 1_4:-36658949 Msa0161380:CDS
AGCCAGTGGGAGACTTGAAG+AGG 0.607351 1_4:-36657040 Msa0161380:CDS
TCAATCTGAAAATCTCAAAG+AGG 0.608393 1_4:-36662361 Msa0161380:CDS
TAATTACAGGATGACAGTAA+CGG 0.608571 1_4:-36662429 Msa0161380:intron
GACCCAGGCAGAAGAGCAGG+GGG 0.609286 1_4:-36659521 Msa0161380:CDS
CGAGCTACGAGCAGTGCCAA+TGG 0.609721 1_4:-36655579 Msa0161380:CDS
TACTGCACCAGCAAACAGGA+GGG 0.613551 1_4:+36657895 None:intergenic
AATTTACAGAAGAAGCCAGT+GGG 0.613665 1_4:-36657053 Msa0161380:CDS
ACGGACGAAGGACATTATGC+AGG 0.613676 1_4:+36658720 None:intergenic
CTCAATTAAAGATACGCCGA+AGG 0.614204 1_4:-36657208 Msa0161380:CDS
AGGGCGTAGCTCATTCTCAA+AGG 0.614458 1_4:+36656810 None:intergenic
AGATGAAAAGAAAATATTTG+GGG 0.615211 1_4:+36657532 None:intergenic
TGATCTGGTTATACAGAGTG+GGG 0.615775 1_4:-36657295 Msa0161380:CDS
ACTGGCTACCGTACAGACCC+AGG 0.615961 1_4:-36659536 Msa0161380:CDS
TTTCACAGTTCTTACACCAG+AGG 0.616002 1_4:+36655604 None:intergenic
TGCATACTTTCATATACAAG+AGG 0.617047 1_4:+36656628 None:intergenic
CCTTGATTTGCACATACTAG+AGG 0.617488 1_4:+36660369 None:intergenic
ACTGCACCAGCAAACAGGAG+GGG 0.617631 1_4:+36657896 None:intergenic
GGCTTATCGTCAGCAAGTAG+AGG 0.617981 1_4:-36656139 Msa0161380:CDS
GCTGGCAGATGTCAAACAGA+TGG 0.618496 1_4:-36656869 Msa0161380:CDS
TTCCATAATTAAAGTTGCAG+GGG 0.619325 1_4:+36658295 None:intergenic
ATTTCTTGATGATGTCAATG+AGG 0.619642 1_4:-36654977 Msa0161380:CDS
CCACAGCTCTAGAAAACGAA+TGG 0.621222 1_4:+36656774 None:intergenic
GGCAGATGTCAAACAGATGG+CGG 0.627057 1_4:-36656866 Msa0161380:CDS
TTTGAGTGAATATCAGAGCT+CGG 0.627640 1_4:+36657676 None:intergenic
ATCATCCTTGGCAACAACAG+CGG 0.628698 1_4:+36656903 None:intergenic
AGAGGATGAGTATGTAAATG+AGG 0.628795 1_4:-36657022 Msa0161380:CDS
GTGGAGAAAGTGTTTCCAGT+TGG 0.630038 1_4:+36659418 None:intergenic
GAAAGATCCTGATATTTCTG+TGG 0.634360 1_4:-36659584 Msa0161380:CDS
ACGTGAACTGGAAGAAGCTG+TGG 0.634956 1_4:-36657085 Msa0161380:CDS
TCCATGAGATCATTCTGTAG+TGG 0.637689 1_4:+36658875 None:intergenic
TCAGGCCCGCAATTGTTCGT+CGG 0.638038 1_4:-36657794 Msa0161380:CDS
GATCAACCCAACCAGAGGAG+AGG 0.639780 1_4:-36657584 Msa0161380:CDS
TTAGTTGTGTAACAGATGAA+CGG 0.640570 1_4:-36660314 Msa0161380:CDS
GAAAACATAAAAGACAAGGA+TGG 0.641279 1_4:-36659090 Msa0161380:CDS
CAGGATTGAGGACACAGAGT+GGG 0.641768 1_4:-36656713 Msa0161380:CDS
TGTTACACAACTAATAGCAA+AGG 0.643144 1_4:+36660323 None:intergenic
CCAGGATTGAGGACACAGAG+TGG 0.645633 1_4:-36656714 Msa0161380:CDS
AGCACCTTGTGAAAATTCAG+AGG 0.645927 1_4:-36659497 Msa0161380:CDS
ATTTCAAAGGATGATTGATG+TGG 0.647783 1_4:-36657958 Msa0161380:CDS
ACAGACCTGATGTTGAGCCA+AGG 0.648812 1_4:+36656116 None:intergenic
CCAGAGAGTAGTGAAGATGG+TGG 0.649939 1_4:-36662756 Msa0161380:CDS
GTTGGCACCACAATTAGATG+TGG 0.651394 1_4:+36659199 None:intergenic
CCTATATCAGGAATGGTCGA+GGG 0.654736 1_4:-36658776 Msa0161380:CDS
AGAATGATCTCATGGAACTG+TGG 0.655157 1_4:-36658868 Msa0161380:CDS
TTGGGAAGAGAGGATAAGAG+AGG 0.655410 1_4:-36658174 Msa0161380:CDS
GAATTTACAGAAGAAGCCAG+TGG 0.657658 1_4:-36657054 Msa0161380:CDS
TATACTGTAGGCTGTCAAAG+AGG 0.660684 1_4:-36658634 Msa0161380:CDS
GACGGAGTAAGAACGGACGA+AGG 0.662118 1_4:+36658708 None:intergenic
GATGATCTGGTTATACAGAG+TGG 0.664981 1_4:-36657297 Msa0161380:CDS
TCGCATTGAAAGGTATAAGG+AGG 0.667878 1_4:-36656683 Msa0161380:CDS
ATGGGAACAAGTATGAAACA+GGG 0.672499 1_4:+36658018 None:intergenic
AGATGGATCAACCCAACCAG+AGG 0.672566 1_4:-36657589 Msa0161380:CDS
CGATGAAACAACCTTATCCG+AGG 0.677716 1_4:-36660013 Msa0161380:CDS
GAGCGAAAACATAAAAGACA+AGG 0.683019 1_4:-36659094 Msa0161380:CDS
GATCTGGTTATACAGAGTGG+GGG 0.691582 1_4:-36657294 Msa0161380:CDS
CCTTTGAAATCGTTCAACTG+GGG 0.694290 1_4:+36657971 None:intergenic
TGGTGTGACTGGAAAACATG+GGG 0.699055 1_4:+36658824 None:intergenic
TTGGTGTGACTGGAAAACAT+GGG 0.700336 1_4:+36658823 None:intergenic
ATGTACAAACGACTCCAGCA+CGG 0.704652 1_4:-36662543 Msa0161380:CDS
CGACTTATACAATTCGACTG+TGG 0.715312 1_4:-36657750 Msa0161380:CDS
GTGCAGCAGCTATTGCATGG+TGG 0.734363 1_4:-36658142 Msa0161380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATTTAAAAAAAAAA+AGG + chr1_4:36656088-36656107 None:intergenic 0.0%
!! TAAAAAGATAACTAATAAAT+TGG + chr1_4:36656556-36656575 None:intergenic 10.0%
!!! ATTATTTTTTTTTTTTTGAG+GGG - chr1_4:36657118-36657137 Msa0161380:CDS 10.0%
!! TTAAACTCTAAATTATTATT+CGG + chr1_4:36657842-36657861 None:intergenic 10.0%
!! AATTTCAAAAAAAATTGATT+CGG + chr1_4:36661153-36661172 None:intergenic 10.0%
!!! AATTTTAAGTTCATTTAAAA+AGG + chr1_4:36661400-36661419 None:intergenic 10.0%
!!! ATGAACTTAAAATTTAAAAT+TGG - chr1_4:36661406-36661425 Msa0161380:intron 10.0%
!!! TTATTTTTTTTTTTTTGAGG+GGG - chr1_4:36657119-36657138 Msa0161380:CDS 15.0%
!! AAGATGAAAAGAAAATATTT+GGG + chr1_4:36660218-36660237 None:intergenic 15.0%
!!! TGCTATTTATGATATATTTA+TGG - chr1_4:36661175-36661194 Msa0161380:intron 15.0%
!!! TAAAATTTAAAATTGGTCTA+AGG - chr1_4:36661413-36661432 Msa0161380:intron 15.0%
!!! AAAATTTAAAATTGGTCTAA+GGG - chr1_4:36661414-36661433 Msa0161380:intron 15.0%
!! TAAAATGATATTACATTACA+AGG + chr1_4:36661896-36661915 None:intergenic 15.0%
!!! TGTAATGTAATATCATTTTA+TGG - chr1_4:36661896-36661915 Msa0161380:intron 15.0%
!!! TTTTGAGATAGATTATTTGT+TGG + chr1_4:36655356-36655375 None:intergenic 20.0%
!! AAATAATCTATCTCAAAATG+AGG - chr1_4:36655358-36655377 Msa0161380:CDS 20.0%
!! TTGATAAATGAATTATGAAG+AGG + chr1_4:36655672-36655691 None:intergenic 20.0%
!!! AACTAAATAAGACTTCATTT+TGG + chr1_4:36655860-36655879 None:intergenic 20.0%
!!! TCATATGTACTTTTGATAAT+TGG + chr1_4:36655906-36655925 None:intergenic 20.0%
!! AAGAAAATATCAAATTCATC+TGG - chr1_4:36656061-36656080 Msa0161380:intron 20.0%
!! AAAGATAACTAATAAATTGG+AGG + chr1_4:36656553-36656572 None:intergenic 20.0%
!! AATCAAAACAAACATAAACA+TGG + chr1_4:36656798-36656817 None:intergenic 20.0%
!! CATCATAACAAAAAGTAATT+AGG + chr1_4:36657349-36657368 None:intergenic 20.0%
!!! CTGAAAAACTTTATTTTGAA+TGG + chr1_4:36657560-36657579 None:intergenic 20.0%
!! AATGTGTTAAATACTTGTAA+TGG - chr1_4:36657587-36657606 Msa0161380:CDS 20.0%
!! TTAACTTTATTACAATGATC+AGG - chr1_4:36657709-36657728 Msa0161380:CDS 20.0%
!!! TTTTTCCTCTTTTACTTTTT+AGG - chr1_4:36658042-36658061 Msa0161380:CDS 20.0%
!!! TTCAAAATTTTGACCTATTT+CGG - chr1_4:36658619-36658638 Msa0161380:CDS 20.0%
!!! AACTTATAGATTAGTTATTC+AGG - chr1_4:36658711-36658730 Msa0161380:CDS 20.0%
!! TTAAAAATTGGAAATCACAA+AGG - chr1_4:36658794-36658813 Msa0161380:CDS 20.0%
!!! TTTTGATGAATATCATATAC+AGG + chr1_4:36659699-36659718 None:intergenic 20.0%
!! ATATGATATTCATCAAAAGA+AGG - chr1_4:36659701-36659720 Msa0161380:intron 20.0%
!! ATAACCATACAAATTAATGA+AGG + chr1_4:36660123-36660142 None:intergenic 20.0%
!! AGATGAAAAGAAAATATTTG+GGG + chr1_4:36660217-36660236 None:intergenic 20.0%
!! CAAGATGAAAAGAAAATATT+TGG + chr1_4:36660219-36660238 None:intergenic 20.0%
!!! TTATTTTTTATGATAGTGAC+TGG - chr1_4:36660288-36660307 Msa0161380:intron 20.0%
!! TTCATTCTCTTTATTCAAAT+TGG + chr1_4:36660783-36660802 None:intergenic 20.0%
!! GAGAATGAATTAATGTTAAA+TGG - chr1_4:36660794-36660813 Msa0161380:intron 20.0%
!! AATGAATTAATGTTAAATGG+AGG - chr1_4:36660797-36660816 Msa0161380:intron 20.0%
!! TATGTTGGAGATATATTATT+TGG + chr1_4:36661207-36661226 None:intergenic 20.0%
!! AACTTAAGTAGGTTTATAAA+TGG + chr1_4:36661313-36661332 None:intergenic 20.0%
!!! AATGCTCAGTTTTTAATTAC+AGG - chr1_4:36655304-36655323 Msa0161380:intron 25.0%
!! ATCAAATGGAACATTTTCAT+TGG + chr1_4:36655426-36655445 None:intergenic 25.0%
!!! AGGTGAAATTTCATTTTTCT+TGG - chr1_4:36655459-36655478 Msa0161380:CDS 25.0%
! AATGAAACTTGAACCAAAAA+TGG + chr1_4:36655503-36655522 None:intergenic 25.0%
!!! AAGTCTTATTTAGTTCTTCA+GGG - chr1_4:36655865-36655884 Msa0161380:intron 25.0%
! TCACTAATGATACAAATTAC+TGG - chr1_4:36656125-36656144 Msa0161380:CDS 25.0%
!!! ATTTTATCTCAGGTTGATTT+GGG - chr1_4:36656224-36656243 Msa0161380:intron 25.0%
!!! GGTAAAATATTTTAAGAGTG+AGG + chr1_4:36656617-36656636 None:intergenic 25.0%
! ATAATACCTGAAGTTATGAA+TGG - chr1_4:36656974-36656993 Msa0161380:CDS 25.0%
! TATCAATTGATATGAGTAGA+CGG - chr1_4:36657221-36657240 Msa0161380:CDS 25.0%
!! TAATTGTGAATATCTAGCTT+GGG + chr1_4:36657325-36657344 None:intergenic 25.0%
! ATAATTGTGAATATCTAGCT+TGG + chr1_4:36657326-36657345 None:intergenic 25.0%
! ATAGGTAAACAAATTATGCA+TGG + chr1_4:36657635-36657654 None:intergenic 25.0%
!! AATTTGTTTACCTATCTTGA+AGG - chr1_4:36657640-36657659 Msa0161380:CDS 25.0%
! ATTAGTAAAACCTTCAAGAT+AGG + chr1_4:36657653-36657672 None:intergenic 25.0%
!!! ATTTACTTGTTTTCATCTCT+TGG - chr1_4:36657671-36657690 Msa0161380:CDS 25.0%
! TTGTAATAAAGTTAAGACAC+AGG + chr1_4:36657704-36657723 None:intergenic 25.0%
!!! CATATAATAGCTTTGTTATG+AGG + chr1_4:36657888-36657907 None:intergenic 25.0%
! TGAATATCAACATATTGGAT+TGG - chr1_4:36658399-36658418 Msa0161380:CDS 25.0%
! ATGTATGAAAAAAAGCTGAA+TGG - chr1_4:36658436-36658455 Msa0161380:CDS 25.0%
!! GTGATTTCCAATTTTTAATG+AGG + chr1_4:36658792-36658811 None:intergenic 25.0%
!!! TTGCAAATGCCAATTTTTTT+GGG - chr1_4:36659187-36659206 Msa0161380:CDS 25.0%
! ACTAATCATCCCAAAAAAAT+TGG + chr1_4:36659199-36659218 None:intergenic 25.0%
!!! CATTTTTGAAGAGATTCAAA+AGG - chr1_4:36659545-36659564 Msa0161380:CDS 25.0%
! CACTAATCAATCGATATATA+TGG + chr1_4:36660376-36660395 None:intergenic 25.0%
! ATTAAAACATGTTGAAGATG+AGG - chr1_4:36660616-36660635 Msa0161380:intron 25.0%
!!! TCAAAAAAAATTGATTCGGA+GGG + chr1_4:36661149-36661168 None:intergenic 25.0%
!!! TTCAAAAAAAATTGATTCGG+AGG + chr1_4:36661150-36661169 None:intergenic 25.0%
! TTTATCAGCTAAAACTATGT+TGG + chr1_4:36661222-36661241 None:intergenic 25.0%
!! TTGTTGTTGTTGTTGTAAAA+AGG + chr1_4:36661342-36661361 None:intergenic 25.0%
! AGTAATAAACATTACAAGCA+TGG + chr1_4:36661448-36661467 None:intergenic 25.0%
!! GATTTACTACTATCTTTTCT+TGG - chr1_4:36661547-36661566 Msa0161380:intron 25.0%
! TTTAATGTTCGTGTAGTTAA+TGG - chr1_4:36661726-36661745 Msa0161380:intron 25.0%
!!! ATTTTTTTCAAAGCCAATGA+AGG + chr1_4:36661835-36661854 None:intergenic 25.0%
!! TTGTGATAGTTTGAAATAGA+TGG - chr1_4:36661972-36661991 Msa0161380:intron 25.0%
!!! GTTTTCTTTGGTTTCTTTTT+AGG + chr1_4:36662090-36662109 None:intergenic 25.0%
!!! GATTTGAACTTTGTTTTCTT+TGG + chr1_4:36662102-36662121 None:intergenic 25.0%
!! TTTTTATGCATACTTGAACT+TGG + chr1_4:36662237-36662256 None:intergenic 25.0%
! AAAATTGTCATGTTGCATTA+CGG + chr1_4:36662617-36662636 None:intergenic 25.0%
!! TAATGCAACATGACAATTTT+TGG - chr1_4:36662617-36662636 Msa0161380:intron 25.0%
!! AATGCAACATGACAATTTTT+GGG - chr1_4:36662618-36662637 Msa0161380:intron 25.0%
!! ACTTGATTGGTTAGATAAAT+CGG - chr1_4:36662710-36662729 Msa0161380:CDS 25.0%
TTCTTTGCAATTAGGAGAAT+TGG - chr1_4:36654950-36654969 Msa0161380:CDS 30.0%
TGGCTAATATATGCAGAAAA+TGG - chr1_4:36655156-36655175 Msa0161380:intron 30.0%
TAATTACAGGATGACAGTAA+CGG - chr1_4:36655317-36655336 Msa0161380:intron 30.0%
TCAATCTGAAAATCTCAAAG+AGG - chr1_4:36655385-36655404 Msa0161380:CDS 30.0%
TCTTCGTCAGAAAAATCAAA+TGG + chr1_4:36655440-36655459 None:intergenic 30.0%
!! ATTTGATTTTTCTGACGAAG+AGG - chr1_4:36655439-36655458 Msa0161380:CDS 30.0%
! ATTTACCCTTGATCCATTTT+TGG - chr1_4:36655487-36655506 Msa0161380:CDS 30.0%
TTGAACCAAAAATGGATCAA+GGG + chr1_4:36655495-36655514 None:intergenic 30.0%
GCAGCAATTCTTAAACAAAT+GGG + chr1_4:36655583-36655602 None:intergenic 30.0%
TGCAGCAATTCTTAAACAAA+TGG + chr1_4:36655584-36655603 None:intergenic 30.0%
! ATTTTCATATCAGCTCCTAT+CGG - chr1_4:36655643-36655662 Msa0161380:CDS 30.0%
AGATGAAGTCAACACAAATA+TGG + chr1_4:36655761-36655780 None:intergenic 30.0%
!! GAAGTCTTATTTAGTTCTTC+AGG - chr1_4:36655864-36655883 Msa0161380:intron 30.0%
!! TTATTTAGTTCTTCAGGGAT+GGG - chr1_4:36655870-36655889 Msa0161380:intron 30.0%
TTGCAAAATACTACTAGTCA+TGG + chr1_4:36655995-36656014 None:intergenic 30.0%
ATAAAATCTGTGGATACAGT+CGG + chr1_4:36656211-36656230 None:intergenic 30.0%
!!! GATTTTATCTCAGGTTGATT+TGG - chr1_4:36656223-36656242 Msa0161380:intron 30.0%
ACATTATGGAGTAACATAGT+TGG + chr1_4:36656451-36656470 None:intergenic 30.0%
AAGATCTAAGTGCAACATTA+TGG + chr1_4:36656465-36656484 None:intergenic 30.0%
TTGATTGAAACAGAAATGTG+TGG + chr1_4:36656510-36656529 None:intergenic 30.0%
!! ATATTTTAAGAGTGAGGAAG+TGG + chr1_4:36656611-36656630 None:intergenic 30.0%
!! GCAAAAGAAAAGTGCTAAAA+GGG + chr1_4:36656638-36656657 None:intergenic 30.0%
!! AGCAAAAGAAAAGTGCTAAA+AGG + chr1_4:36656639-36656658 None:intergenic 30.0%
GTGTGTTATGAAATATTGTC+AGG - chr1_4:36656702-36656721 Msa0161380:CDS 30.0%
ATGAAATATTGTCAGGAAGA+CGG - chr1_4:36656709-36656728 Msa0161380:CDS 30.0%
CTTATACCATTCATAACTTC+AGG + chr1_4:36656983-36657002 None:intergenic 30.0%
CTGAAGTTATGAATGGTATA+AGG - chr1_4:36656981-36657000 Msa0161380:CDS 30.0%
TATGAATGGTATAAGGCTAT+TGG - chr1_4:36656988-36657007 Msa0161380:CDS 30.0%
ATCACTTGTGCAATTAAACA+GGG + chr1_4:36657019-36657038 None:intergenic 30.0%
TGCATATACTTTAAACTCAC+TGG - chr1_4:36657050-36657069 Msa0161380:CDS 30.0%
GTCTAATGTACTACAATTTG+TGG - chr1_4:36657145-36657164 Msa0161380:CDS 30.0%
TGTTACACAACTAATAGCAA+AGG + chr1_4:36657426-36657445 None:intergenic 30.0%
TTAGTTGTGTAACAGATGAA+CGG - chr1_4:36657432-36657451 Msa0161380:CDS 30.0%
GTTATGAGGATAGAAAACTT+TGG + chr1_4:36657874-36657893 None:intergenic 30.0%
! TCATCTCTAGTTGTTACTTA+TGG - chr1_4:36657985-36658004 Msa0161380:CDS 30.0%
AGAGGAAAAAAGTGAAATGA+TGG + chr1_4:36658032-36658051 None:intergenic 30.0%
CTTCGTGAATATCAACATAT+TGG - chr1_4:36658394-36658413 Msa0161380:CDS 30.0%
! ATCAACATATTGGATTGGAT+TGG - chr1_4:36658404-36658423 Msa0161380:CDS 30.0%
! AAAAAAGCTGAATGGCATTT+TGG - chr1_4:36658444-36658463 Msa0161380:CDS 30.0%
AAGCAAAGCTATAGTCATAA+TGG + chr1_4:36658494-36658513 None:intergenic 30.0%
GAAAACATAAAAGACAAGGA+TGG - chr1_4:36658656-36658675 Msa0161380:CDS 30.0%
AAAGTGGAAATACTTGATCT+TGG - chr1_4:36658756-36658775 Msa0161380:CDS 30.0%
AAGCTCACCTCATTAAAAAT+TGG - chr1_4:36658782-36658801 Msa0161380:CDS 30.0%
AAAATTGGAAATCACAAAGG+TGG - chr1_4:36658797-36658816 Msa0161380:CDS 30.0%
AAAACCAATCCTTAAACTCT+TGG + chr1_4:36658945-36658964 None:intergenic 30.0%
AGAGGAAAAAGTTAATAAGG+AGG - chr1_4:36658993-36659012 Msa0161380:CDS 30.0%
!!! CTTGCAAATGCCAATTTTTT+TGG - chr1_4:36659186-36659205 Msa0161380:CDS 30.0%
ATATCAAAAGAACTGACGAT+TGG + chr1_4:36659276-36659295 None:intergenic 30.0%
! TCAGTTCTTTTGATATGTGT+GGG - chr1_4:36659280-36659299 Msa0161380:CDS 30.0%
TTCCATAATTAAAGTTGCAG+GGG + chr1_4:36659454-36659473 None:intergenic 30.0%
GTTCCATAATTAAAGTTGCA+GGG + chr1_4:36659455-36659474 None:intergenic 30.0%
AAATGTCAGAAAAAGCAGTT+AGG - chr1_4:36659516-36659535 Msa0161380:CDS 30.0%
AAGAGATTCAAAAGGCAATT+TGG - chr1_4:36659553-36659572 Msa0161380:CDS 30.0%
AGAGATTCAAAAGGCAATTT+GGG - chr1_4:36659554-36659573 Msa0161380:CDS 30.0%
ATTTCAAAGGATGATTGATG+TGG - chr1_4:36659788-36659807 Msa0161380:intron 30.0%
CTGAGGAAATTAAAATCAGA+AGG - chr1_4:36660044-36660063 Msa0161380:intron 30.0%
!! GAAGCCTTCATTAATTTGTA+TGG - chr1_4:36660116-36660135 Msa0161380:intron 30.0%
CTTCAAAATATTCTCCTCAA+TGG + chr1_4:36660405-36660424 None:intergenic 30.0%
! AAGGCTGCTTTATCTATAAT+TGG + chr1_4:36661001-36661020 None:intergenic 30.0%
AATTATAGATAAAGCAGCCT+TGG - chr1_4:36661000-36661019 Msa0161380:intron 30.0%
TGCATACTTTCATATACAAG+AGG + chr1_4:36661121-36661140 None:intergenic 30.0%
TGCAGAAGAACATAAACTAT+AGG + chr1_4:36661272-36661291 None:intergenic 30.0%
GCATACAGAACAAACAAATT+TGG + chr1_4:36661512-36661531 None:intergenic 30.0%
TGTATGCATGATACAATTGT+GGG - chr1_4:36661525-36661544 Msa0161380:intron 30.0%
ATATGAAGCTAAACTGAAAG+AGG - chr1_4:36661759-36661778 Msa0161380:intron 30.0%
! AAAGTTTGTTTCCATAGAGA+TGG + chr1_4:36661869-36661888 None:intergenic 30.0%
! GTTTGAAATAGATGGAAACA+AGG - chr1_4:36661980-36661999 Msa0161380:intron 30.0%
!! TTTGGTTTCTTTTTAGGCTT+GGG + chr1_4:36662084-36662103 None:intergenic 30.0%
! AAGTTCAAATCTCTGAAGAA+AGG - chr1_4:36662111-36662130 Msa0161380:intron 30.0%
AAGTCTAAATTAACAGCTGA+TGG - chr1_4:36662264-36662283 Msa0161380:intron 30.0%
ATCAGATCCATATAAAAGTC+TGG - chr1_4:36662398-36662417 Msa0161380:CDS 30.0%
!!! CTGCATTTGACTTATTTTTG+CGG + chr1_4:36662540-36662559 None:intergenic 30.0%
!! ATTTCTTGATGATGTCAATG+AGG - chr1_4:36662769-36662788 Msa0161380:CDS 30.0%
CCTAATTGCAAAGAAACCAA+TGG + chr1_4:36654945-36654964 None:intergenic 35.0%
!! CCATTGGTTTCTTTGCAATT+AGG - chr1_4:36654942-36654961 Msa0161380:CDS 35.0%
AAGCATTATCCTACTAAGTG+GGG + chr1_4:36655099-36655118 None:intergenic 35.0%
CAAGCATTATCCTACTAAGT+GGG + chr1_4:36655100-36655119 None:intergenic 35.0%
!! TGTATGCTTGTTTCTGACAT+AGG - chr1_4:36655131-36655150 Msa0161380:intron 35.0%
! TTTAATTTCACCGCGTTGAA+TGG - chr1_4:36655257-36655276 Msa0161380:intron 35.0%
TTGAATGGCATAGTGAGTTA+AGG - chr1_4:36655272-36655291 Msa0161380:intron 35.0%
TGAATGGCATAGTGAGTTAA+GGG - chr1_4:36655273-36655292 Msa0161380:intron 35.0%
CTTGAACCAAAAATGGATCA+AGG + chr1_4:36655496-36655515 None:intergenic 35.0%
! CAACTCTATTTGAGACACTA+TGG - chr1_4:36655619-36655638 Msa0161380:CDS 35.0%
! TTTTCATATCAGCTCCTATC+GGG - chr1_4:36655644-36655663 Msa0161380:CDS 35.0%
!! CTTATTTAGTTCTTCAGGGA+TGG - chr1_4:36655869-36655888 Msa0161380:intron 35.0%
!! TATTTAGTTCTTCAGGGATG+GGG - chr1_4:36655871-36655890 Msa0161380:intron 35.0%
!!! TACTTTTGATAATTGGCTCG+TGG + chr1_4:36655899-36655918 None:intergenic 35.0%
AACTGAACTAGAACAATGGT+TGG + chr1_4:36656023-36656042 None:intergenic 35.0%
GAACAACTGAACTAGAACAA+TGG + chr1_4:36656027-36656046 None:intergenic 35.0%
TACTGGAGAACTAGATTGAT+TGG - chr1_4:36656142-36656161 Msa0161380:CDS 35.0%
!! TGGAGTACTTTTGTGAAAGT+AGG - chr1_4:36656162-36656181 Msa0161380:CDS 35.0%
! GTATCCACAGATTTTATCTC+AGG - chr1_4:36656214-36656233 Msa0161380:intron 35.0%
TCAACCTGAGATAAAATCTG+TGG + chr1_4:36656221-36656240 None:intergenic 35.0%
TACTTCTCATGTATGTGAGT+TGG + chr1_4:36656250-36656269 None:intergenic 35.0%
ATATCGCTAATATCTCTGCT+TGG - chr1_4:36656302-36656321 Msa0161380:intron 35.0%
GTGGTACATATAAGTAAAGC+AGG + chr1_4:36656491-36656510 None:intergenic 35.0%
AGTTAGCATAAGCAAGTAGT+TGG + chr1_4:36656673-36656692 None:intergenic 35.0%
! GCTTATGCTAACTGTTTTGT+TGG - chr1_4:36656680-36656699 Msa0161380:CDS 35.0%
!! ATTGCTTTTGATCACCAATG+AGG - chr1_4:36656815-36656834 Msa0161380:CDS 35.0%
! ATAAAACGTTGACGTTTTCC+AGG + chr1_4:36656935-36656954 None:intergenic 35.0%
CATCACTTGTGCAATTAAAC+AGG + chr1_4:36657020-36657039 None:intergenic 35.0%
TAATTGCACAAGTGATGCAT+AGG - chr1_4:36657023-36657042 Msa0161380:CDS 35.0%
! TATGCTGTCAAAGAGTATGT+AGG + chr1_4:36657180-36657199 None:intergenic 35.0%
ATATGAGTAGACGGATAACT+TGG - chr1_4:36657230-36657249 Msa0161380:CDS 35.0%
TTGTGGGATCCATGATATTT+AGG + chr1_4:36657264-36657283 None:intergenic 35.0%
! AGTTGATGCAATTGATCCAA+AGG - chr1_4:36657772-36657791 Msa0161380:CDS 35.0%
ACTGCTTGCAAGGTATAAAA+AGG - chr1_4:36657952-36657971 Msa0161380:CDS 35.0%
CTTGCAAGGTATAAAAAGGT+AGG - chr1_4:36657956-36657975 Msa0161380:CDS 35.0%
CAGGTCCTAAAAAGTAAAAG+AGG + chr1_4:36658050-36658069 None:intergenic 35.0%
CTTTCTGCTTAGCATTATCA+TGG + chr1_4:36658147-36658166 None:intergenic 35.0%
! GAAAGATCCTGATATTTCTG+TGG - chr1_4:36658162-36658181 Msa0161380:CDS 35.0%
TCTTCATCCACAGAAATATC+AGG + chr1_4:36658172-36658191 None:intergenic 35.0%
GTGGATGAAGATATGAATTC+CGG - chr1_4:36658181-36658200 Msa0161380:CDS 35.0%
! CTTTCCTCTGAATTTTCACA+AGG + chr1_4:36658256-36658275 None:intergenic 35.0%
! TTTTGTACGCACTTTAGTTG+TGG + chr1_4:36658350-36658369 None:intergenic 35.0%
!! AGAGAGTACTTGAGTAGAAA+GGG + chr1_4:36658376-36658395 None:intergenic 35.0%
!! AAGAGAGTACTTGAGTAGAA+AGG + chr1_4:36658377-36658396 None:intergenic 35.0%
AACTAGTGTGATGCTTAACT+GGG - chr1_4:36658567-36658586 Msa0161380:CDS 35.0%
! TAGGTCAAAATTTTGAACGC+AGG + chr1_4:36658616-36658635 None:intergenic 35.0%
GAGCGAAAACATAAAAGACA+AGG - chr1_4:36658652-36658671 Msa0161380:CDS 35.0%
ATGCACACATGAAATGAGTT+TGG + chr1_4:36658688-36658707 None:intergenic 35.0%
! CTTTTTGCGCTTGAAAACTT+TGG + chr1_4:36658740-36658759 None:intergenic 35.0%
!! AAGTTTTCAAGCGCAAAAAG+TGG - chr1_4:36658740-36658759 Msa0161380:CDS 35.0%
!! TGGTTTTGCAATCCTATATC+AGG - chr1_4:36658958-36658977 Msa0161380:CDS 35.0%
TTGCAATCCTATATCAGGAA+TGG - chr1_4:36658963-36658982 Msa0161380:CDS 35.0%
GGGAGAGGAAAAAGTTAATA+AGG - chr1_4:36658990-36659009 Msa0161380:CDS 35.0%
ATGACATGCTCATGTTTCAT+TGG + chr1_4:36659093-36659112 None:intergenic 35.0%
ATGAGCATGTCATATACTGT+AGG - chr1_4:36659100-36659119 Msa0161380:CDS 35.0%
TAATCATCCTGACCTATTTG+AGG - chr1_4:36659245-36659264 Msa0161380:CDS 35.0%
AATCATCCTGACCTATTTGA+GGG - chr1_4:36659246-36659265 Msa0161380:CDS 35.0%
! GTCAGTTCTTTTGATATGTG+TGG - chr1_4:36659279-36659298 Msa0161380:CDS 35.0%
TTCTAAGTCGACTGTAGAAA+AGG + chr1_4:36659355-36659374 None:intergenic 35.0%
!! TTTTCTACAGTCGACTTAGA+AGG - chr1_4:36659354-36659373 Msa0161380:CDS 35.0%
TTGACTATAGCATGACATCT+TGG - chr1_4:36659400-36659419 Msa0161380:CDS 35.0%
TGACTATAGCATGACATCTT+GGG - chr1_4:36659401-36659420 Msa0161380:CDS 35.0%
CGTTCCATAATTAAAGTTGC+AGG + chr1_4:36659456-36659475 None:intergenic 35.0%
! TAATTATGGAACGCACTGAT+AGG - chr1_4:36659463-36659482 Msa0161380:CDS 35.0%
! AATTATGGAACGCACTGATA+GGG - chr1_4:36659464-36659483 Msa0161380:CDS 35.0%
! TTTTTCTGACATTTCAGTCC+GGG + chr1_4:36659510-36659529 None:intergenic 35.0%
! CTTTTTCTGACATTTCAGTC+CGG + chr1_4:36659511-36659530 None:intergenic 35.0%
ATCATATACAGGATGCCTTA+TGG + chr1_4:36659688-36659707 None:intergenic 35.0%
ATGGGAACAAGTATGAAACA+GGG + chr1_4:36659731-36659750 None:intergenic 35.0%
ATACTTGTTCCCATCAAAAC+TGG - chr1_4:36659737-36659756 Msa0161380:intron 35.0%
!! TCCTTTGAAATCGTTCAACT+GGG + chr1_4:36659779-36659798 None:intergenic 35.0%
!! ATCCTTTGAAATCGTTCAAC+TGG + chr1_4:36659780-36659799 None:intergenic 35.0%
TTTGAGTGAATATCAGAGCT+CGG + chr1_4:36660073-36660092 None:intergenic 35.0%
TATACTTACATGCGCTTAGA+TGG - chr1_4:36660140-36660159 Msa0161380:intron 35.0%
TGTGTTAAAACGCTGCATTA+AGG + chr1_4:36660192-36660211 None:intergenic 35.0%
ATGATCTGGTTATACAGAGT+GGG - chr1_4:36660450-36660469 Msa0161380:intron 35.0%
! CTTTAAGAAGCTTGATCCTA+TGG - chr1_4:36660490-36660509 Msa0161380:intron 35.0%
! GATCCTATGGAACTATTTTC+AGG - chr1_4:36660503-36660522 Msa0161380:intron 35.0%
TGACCTGAAAATAGTTCCAT+AGG + chr1_4:36660509-36660528 None:intergenic 35.0%
TGAAGATGAGGCAGATTATA+TGG - chr1_4:36660628-36660647 Msa0161380:intron 35.0%
AATTTACAGAAGAAGCCAGT+GGG - chr1_4:36660693-36660712 Msa0161380:intron 35.0%
AGAGGATGAGTATGTAAATG+AGG - chr1_4:36660724-36660743 Msa0161380:intron 35.0%
GTAGGTTTATAAATGGTTCC+AGG + chr1_4:36661306-36661325 None:intergenic 35.0%
AAAGGACAAGCAACTTAAGT+AGG + chr1_4:36661324-36661343 None:intergenic 35.0%
CTGTATGCATGATACAATTG+TGG - chr1_4:36661524-36661543 Msa0161380:intron 35.0%
! CTTTTCTTGGCCTGTATATT+AGG - chr1_4:36661560-36661579 Msa0161380:intron 35.0%
AAGTCAGGAAAGAGAACAAA+AGG + chr1_4:36661673-36661692 None:intergenic 35.0%
AATGTTCGTGTAGTTAATGG+AGG - chr1_4:36661729-36661748 Msa0161380:intron 35.0%
!! TTTTTCAAAGCCAATGAAGG+AGG + chr1_4:36661832-36661851 None:intergenic 35.0%
AATCTGTACTACCATCTCTA+TGG - chr1_4:36661855-36661874 Msa0161380:intron 35.0%
! GAGGGTTTTTGTATTAATCC+TGG - chr1_4:36661933-36661952 Msa0161380:intron 35.0%
ATGGAAGATACAGATATCTC+AGG + chr1_4:36662026-36662045 None:intergenic 35.0%
!! TGTATCTTCCATTTTTCAGC+AGG - chr1_4:36662034-36662053 Msa0161380:intron 35.0%
!! CTTTGGTTTCTTTTTAGGCT+TGG + chr1_4:36662085-36662104 None:intergenic 35.0%
! GACACAACCAGACTTTTATA+TGG + chr1_4:36662408-36662427 None:intergenic 35.0%
!!! CATTTGACTTATTTTTGCGG+CGG + chr1_4:36662537-36662556 None:intergenic 35.0%
TAGCTACAAAGACAGAATGT+TGG - chr1_4:36662673-36662692 Msa0161380:intron 35.0%
ACCACAACTCATATTGGAAA+TGG - chr1_4:36662736-36662755 Msa0161380:CDS 35.0%
TCCATTTCCAATATGAGTTG+TGG + chr1_4:36662740-36662759 None:intergenic 35.0%
TGCAATTAGGAGAATTGGCA+AGG - chr1_4:36654955-36654974 Msa0161380:CDS 40.0%
GGTGGACAAATAGTTAGAAC+TGG - chr1_4:36655008-36655027 Msa0161380:intron 40.0%
AAGAACTTGCATCAGGTATG+CGG - chr1_4:36655048-36655067 Msa0161380:intron 40.0%
AAGTTATGACCCCACTTAGT+AGG - chr1_4:36655087-36655106 Msa0161380:intron 40.0%
CCAAGCATTATCCTACTAAG+TGG + chr1_4:36655101-36655120 None:intergenic 40.0%
CCACTTAGTAGGATAATGCT+TGG - chr1_4:36655098-36655117 Msa0161380:intron 40.0%
!! TTTTCATTGGCTGTCTCACT+GGG + chr1_4:36655413-36655432 None:intergenic 40.0%
!! ATTTTCATTGGCTGTCTCAC+TGG + chr1_4:36655414-36655433 None:intergenic 40.0%
TGAGACATCAAACAGAGAGA+TGG + chr1_4:36655733-36655752 None:intergenic 40.0%
CGAATCTAGATCTGTGAGAA+CGG + chr1_4:36656404-36656423 None:intergenic 40.0%
! GAAGACGGTGACTTTTTGTT+TGG - chr1_4:36656724-36656743 Msa0161380:CDS 40.0%
!! TGACTTTTTGTTTGGCACAG+AGG - chr1_4:36656732-36656751 Msa0161380:CDS 40.0%
TTTGTTTGGCACAGAGGATA+AGG - chr1_4:36656738-36656757 Msa0161380:CDS 40.0%
ATAAGGTACAACTGTGTGTG+AGG - chr1_4:36656755-36656774 Msa0161380:CDS 40.0%
! CTTTTGATCACCAATGAGGT+AGG - chr1_4:36656819-36656838 Msa0161380:CDS 40.0%
! TTGACGTTTTCCAGGACATA+AGG + chr1_4:36656927-36656946 None:intergenic 40.0%
ACTGGTGCTTACTACAAACA+AGG - chr1_4:36657068-36657087 Msa0161380:CDS 40.0%
! TCTAGCTTGGGAATAGAACT+TGG + chr1_4:36657313-36657332 None:intergenic 40.0%
!! CCTTGATTTGCACATACTAG+AGG + chr1_4:36657380-36657399 None:intergenic 40.0%
CCTCTAGTATGTGCAAATCA+AGG - chr1_4:36657377-36657396 Msa0161380:CDS 40.0%
! TGAAGCAAAGTCTTGTCACA+AGG + chr1_4:36657476-36657495 None:intergenic 40.0%
!! ACTTGTTTTCATCTCTTGGC+TGG - chr1_4:36657675-36657694 Msa0161380:CDS 40.0%
! CAGTTTTTCTTCCTCGGATA+AGG + chr1_4:36657747-36657766 None:intergenic 40.0%
CTTATCCGAGGAAGAAAAAC+TGG - chr1_4:36657745-36657764 Msa0161380:CDS 40.0%
! TCTGTCCAGTTTTTCTTCCT+CGG + chr1_4:36657753-36657772 None:intergenic 40.0%
TGCAATTGATCCAAAGGATG+AGG - chr1_4:36657778-36657797 Msa0161380:CDS 40.0%
!! TTATTCGGAAGTGTCGTAGA+AGG + chr1_4:36657827-36657846 None:intergenic 40.0%
GCAAGGTATAAAAAGGTAGG+TGG - chr1_4:36657959-36657978 Msa0161380:CDS 40.0%
! TTTAGGACCTGAGTGATGAT+TGG - chr1_4:36658059-36658078 Msa0161380:CDS 40.0%
TTAGGACCTGAGTGATGATT+GGG - chr1_4:36658060-36658079 Msa0161380:CDS 40.0%
TGCTTAGCATTATCATGGAC+TGG + chr1_4:36658142-36658161 None:intergenic 40.0%
TATGAATTCCGGTGAGAAAC+TGG - chr1_4:36658192-36658211 Msa0161380:CDS 40.0%
AGCACCTTGTGAAAATTCAG+AGG - chr1_4:36658249-36658268 Msa0161380:CDS 40.0%
TTCAGAGGAAAGAGAAAGTG+AGG - chr1_4:36658264-36658283 Msa0161380:CDS 40.0%
!! TGGCATTTTGGCAGATGAAA+TGG - chr1_4:36658456-36658475 Msa0161380:CDS 40.0%
!! GGCATTTTGGCAGATGAAAT+GGG - chr1_4:36658457-36658476 Msa0161380:CDS 40.0%
!! GCATTTTGGCAGATGAAATG+GGG - chr1_4:36658458-36658477 Msa0161380:CDS 40.0%
CAGTTAAGCATCACACTAGT+TGG + chr1_4:36658568-36658587 None:intergenic 40.0%
CAACTAGTGTGATGCTTAAC+TGG - chr1_4:36658566-36658585 Msa0161380:CDS 40.0%
! GGGAGACTGAATTTCTGAAA+TGG - chr1_4:36658587-36658606 Msa0161380:CDS 40.0%
AAACGACGAATTCTGTTGAC+TGG - chr1_4:36658844-36658863 Msa0161380:CDS 40.0%
ACCACTACAGAATGATCTCA+TGG - chr1_4:36658870-36658889 Msa0161380:CDS 40.0%
TCCATGAGATCATTCTGTAG+TGG + chr1_4:36658874-36658893 None:intergenic 40.0%
AGAATGATCTCATGGAACTG+TGG - chr1_4:36658878-36658897 Msa0161380:CDS 40.0%
TTGGTGTGACTGGAAAACAT+GGG + chr1_4:36658926-36658945 None:intergenic 40.0%
CACACCAAGAGTTTAAGGAT+TGG - chr1_4:36658938-36658957 Msa0161380:CDS 40.0%
TTCAATCGACGGAGTAAGAA+CGG + chr1_4:36659048-36659067 None:intergenic 40.0%
CTACATCTCTCTTCAATCGA+CGG + chr1_4:36659059-36659078 None:intergenic 40.0%
TATACTGTAGGCTGTCAAAG+AGG - chr1_4:36659112-36659131 Msa0161380:CDS 40.0%
TATCATCATGCAACTTCGCA+AGG - chr1_4:36659218-36659237 Msa0161380:CDS 40.0%
CAAAAGAACTGACGATTGGA+CGG + chr1_4:36659272-36659291 None:intergenic 40.0%
! TACAGTCGACTTAGAAGGTT+TGG - chr1_4:36659359-36659378 Msa0161380:CDS 40.0%
! ACAGTCGACTTAGAAGGTTT+GGG - chr1_4:36659360-36659379 Msa0161380:CDS 40.0%
GACCCCTGCAACTTTAATTA+TGG - chr1_4:36659449-36659468 Msa0161380:CDS 40.0%
AAAAGGCAATTTGGGAAGAG+AGG - chr1_4:36659562-36659581 Msa0161380:CDS 40.0%
!!! GGGTCTTTTTTTACACCTCA+AGG + chr1_4:36659634-36659653 None:intergenic 40.0%
CTTAGAGTCGTTGAGTAGAT+GGG + chr1_4:36659654-36659673 None:intergenic 40.0%
CATCTACTCAACGACTCTAA+GGG - chr1_4:36659653-36659672 Msa0161380:CDS 40.0%
TAAGGGACCTTGTTACCATA+AGG - chr1_4:36659670-36659689 Msa0161380:CDS 40.0%
GATGGGAACAAGTATGAAAC+AGG + chr1_4:36659732-36659751 None:intergenic 40.0%
!! CAATGTCAGCCAGTTTTGAT+GGG + chr1_4:36659749-36659768 None:intergenic 40.0%
!! ACAATGTCAGCCAGTTTTGA+TGG + chr1_4:36659750-36659769 None:intergenic 40.0%
!! CCTTTGAAATCGTTCAACTG+GGG + chr1_4:36659778-36659797 None:intergenic 40.0%
! AGCATTGCTGCTTGTAAGAT+GGG + chr1_4:36659902-36659921 None:intergenic 40.0%
ATTGTATAAGTCGCCTGTCT+GGG + chr1_4:36659989-36660008 None:intergenic 40.0%
AATTGTATAAGTCGCCTGTC+TGG + chr1_4:36659990-36660009 None:intergenic 40.0%
CGACTTATACAATTCGACTG+TGG - chr1_4:36659996-36660015 Msa0161380:CDS 40.0%
ATTCGACTGTGGAAAATTGC+AGG - chr1_4:36660007-36660026 Msa0161380:CDS 40.0%
TTCATCTTGTCAACTCGTAG+TGG - chr1_4:36660230-36660249 Msa0161380:intron 40.0%
TCATCTTGTCAACTCGTAGT+GGG - chr1_4:36660231-36660250 Msa0161380:intron 40.0%
!! GGTGTTGGTATCAATCTAGT+TGG - chr1_4:36660254-36660273 Msa0161380:intron 40.0%
TGGATCAACAAGCTCAAGAT+CGG - chr1_4:36660321-36660340 Msa0161380:CDS 40.0%
GATGATCTGGTTATACAGAG+TGG - chr1_4:36660449-36660468 Msa0161380:intron 40.0%
TGATCTGGTTATACAGAGTG+GGG - chr1_4:36660451-36660470 Msa0161380:intron 40.0%
CTCAATTAAAGATACGCCGA+AGG - chr1_4:36660538-36660557 Msa0161380:intron 40.0%
!!! CTGTTCTGGTTTTTCTCCTT+CGG + chr1_4:36660557-36660576 None:intergenic 40.0%
AAGGAGAAAAACCAGAACAG+TGG - chr1_4:36660557-36660576 Msa0161380:intron 40.0%
TGGCTTCTTCTGTAAATTCC+TGG + chr1_4:36660691-36660710 None:intergenic 40.0%
GAATTTACAGAAGAAGCCAG+TGG - chr1_4:36660692-36660711 Msa0161380:intron 40.0%
CATGTCAACATCATCATCCT+TGG + chr1_4:36660858-36660877 None:intergenic 40.0%
CTAGAAAACGAATGGCGTAT+CGG + chr1_4:36660967-36660986 None:intergenic 40.0%
!!! CATTCGTTTTCTAGAGCTGT+GGG - chr1_4:36660973-36660992 Msa0161380:intron 40.0%
! GGATCGCATTGAAAGGTATA+AGG - chr1_4:36661060-36661079 Msa0161380:intron 40.0%
! TCGCATTGAAAGGTATAAGG+AGG - chr1_4:36661063-36661082 Msa0161380:intron 40.0%
! TGAAAGGTATAAGGAGGAGA+TGG - chr1_4:36661069-36661088 Msa0161380:intron 40.0%
CTCCTCATCTTCGTCAATTT+CGG + chr1_4:36661098-36661117 None:intergenic 40.0%
!! AAAAATTGATTCGGAGGGAG+AGG + chr1_4:36661144-36661163 None:intergenic 40.0%
!!! GGATGCTGATTTTGCAACAA+CGG - chr1_4:36661586-36661605 Msa0161380:intron 40.0%
!! TTCTCTTTCCTGACTTGTTG+TGG - chr1_4:36661677-36661696 Msa0161380:intron 40.0%
!! ACTTGTTGTGGTTGTGGTTA+TGG - chr1_4:36661689-36661708 Msa0161380:intron 40.0%
TTCATTGTCTCCTCCTTCAT+TGG - chr1_4:36661819-36661838 Msa0161380:intron 40.0%
! TATGGACTGTGTTTACGTTG+AGG - chr1_4:36661914-36661933 Msa0161380:intron 40.0%
! ATGGACTGTGTTTACGTTGA+GGG - chr1_4:36661915-36661934 Msa0161380:intron 40.0%
! AACTGAGCAGATTTTAAGCC+AGG + chr1_4:36661954-36661973 None:intergenic 40.0%
AAGAAAGGATCTCTAACCTC+TGG - chr1_4:36662126-36662145 Msa0161380:intron 40.0%
TTTCACAGTTCTTACACCAG+AGG + chr1_4:36662145-36662164 None:intergenic 40.0%
TCATCGTCATCTATGACCAT+TGG + chr1_4:36662186-36662205 None:intergenic 40.0%
GAACTTGGAGACACAAAATC+AGG + chr1_4:36662222-36662241 None:intergenic 40.0%
AGAAGTCCAAAAAGTCCAAG+AGG - chr1_4:36662307-36662326 Msa0161380:intron 40.0%
GAAGTCCAAAAAGTCCAAGA+GGG - chr1_4:36662308-36662327 Msa0161380:CDS 40.0%
! AAGATCCCTCTTGGACTTTT+TGG + chr1_4:36662316-36662335 None:intergenic 40.0%
GATGTCAATAAGATCCCTCT+TGG + chr1_4:36662325-36662344 None:intergenic 40.0%
ATCCAACTCGTTAGATATGC+AGG - chr1_4:36662362-36662381 Msa0161380:CDS 40.0%
ATCCTGCATATCTAACGAGT+TGG + chr1_4:36662367-36662386 None:intergenic 40.0%
CATAGATGCGACAATCTTTG+CGG - chr1_4:36662560-36662579 Msa0161380:CDS 40.0%
ATTGTCATGTTGCATTACGG+AGG + chr1_4:36662614-36662633 None:intergenic 40.0%
CTACAAAGACAGAATGTTGG+AGG - chr1_4:36662676-36662695 Msa0161380:intron 40.0%
ATTAGGAGAATTGGCAAGGC+AGG - chr1_4:36654959-36654978 Msa0161380:CDS 45.0%
AGTCCAGAGAGTAGTGAAGA+TGG - chr1_4:36654987-36655006 Msa0161380:intron 45.0%
GTTAGAACTGGTGATCCTGA+TGG - chr1_4:36655020-36655039 Msa0161380:intron 45.0%
!! GCTTGTTTCTGACATAGGCA+TGG - chr1_4:36655136-36655155 Msa0161380:intron 45.0%
ATGTACAAACGACTCCAGCA+CGG - chr1_4:36655203-36655222 Msa0161380:intron 45.0%
ACTCACTATGCCATTCAACG+CGG + chr1_4:36655270-36655289 None:intergenic 45.0%
!! ATTATGAAGAGGTGCCCGAT+AGG + chr1_4:36655661-36655680 None:intergenic 45.0%
! TGGACACTTGAGTTGTCTGA+TGG + chr1_4:36655713-36655732 None:intergenic 45.0%
GAAGGTAGAGAGAGAACAGT+GGG + chr1_4:36655784-36655803 None:intergenic 45.0%
! AAAGTAGGCTCTAACCTGTG+AGG - chr1_4:36656177-36656196 Msa0161380:intron 45.0%
CTCTGCTTGGATGTAACCAT+AGG - chr1_4:36656315-36656334 Msa0161380:intron 45.0%
! ACCAATGAGGTAGGTGTTGT+TGG - chr1_4:36656828-36656847 Msa0161380:CDS 45.0%
ACCAACAACACCTACCTCAT+TGG + chr1_4:36656832-36656851 None:intergenic 45.0%
AGGACATAAGGTAGCAGTTG+TGG + chr1_4:36656915-36656934 None:intergenic 45.0%
ACAACTGCTACCTTATGTCC+TGG - chr1_4:36656914-36656933 Msa0161380:CDS 45.0%
TACTACAAACAAGGCAGCTG+AGG - chr1_4:36657077-36657096 Msa0161380:CDS 45.0%
TGAGTAGACGGATAACTTGG+AGG - chr1_4:36657233-36657252 Msa0161380:CDS 45.0%
TAGACGGATAACTTGGAGGT+GGG - chr1_4:36657237-36657256 Msa0161380:CDS 45.0%
GAGGTGGGTCCTAAATATCA+TGG - chr1_4:36657252-36657271 Msa0161380:CDS 45.0%
CGATGAAACAACCTTATCCG+AGG - chr1_4:36657733-36657752 Msa0161380:CDS 45.0%
TAGCGCTTAACCTCATCCTT+TGG + chr1_4:36657791-36657810 None:intergenic 45.0%
GCAAGATCAGTACAACCAAC+TGG - chr1_4:36658313-36658332 Msa0161380:CDS 45.0%
!! GTGGAGAAAGTGTTTCCAGT+TGG + chr1_4:36658331-36658350 None:intergenic 45.0%
TTGGGGTCCACATCTAATTG+TGG - chr1_4:36658540-36658559 Msa0161380:CDS 45.0%
GTTGGCACCACAATTAGATG+TGG + chr1_4:36658550-36658569 None:intergenic 45.0%
TGGTGTGACTGGAAAACATG+GGG + chr1_4:36658925-36658944 None:intergenic 45.0%
! CTTGGTGTGACTGGAAAACA+TGG + chr1_4:36658927-36658946 None:intergenic 45.0%
! CCTTAAACTCTTGGTGTGAC+TGG + chr1_4:36658936-36658955 None:intergenic 45.0%
CCAGTCACACCAAGAGTTTA+AGG - chr1_4:36658933-36658952 Msa0161380:CDS 45.0%
TCCTATATCAGGAATGGTCG+AGG - chr1_4:36658969-36658988 Msa0161380:CDS 45.0%
CCTATATCAGGAATGGTCGA+GGG - chr1_4:36658970-36658989 Msa0161380:CDS 45.0%
AAAGGAGCTAGGCAAAAGCA+TGG + chr1_4:36659337-36659356 None:intergenic 45.0%
TCGACTGTAGAAAAGGAGCT+AGG + chr1_4:36659348-36659367 None:intergenic 45.0%
GACCTGGAAGTAATTAAGCC+CGG - chr1_4:36659489-36659508 Msa0161380:CDS 45.0%
TTGGGAAGAGAGGATAAGAG+AGG - chr1_4:36659572-36659591 Msa0161380:CDS 45.0%
AGAGAGGATAAGAGAGGCAA+AGG - chr1_4:36659578-36659597 Msa0161380:CDS 45.0%
CCTTAGAGTCGTTGAGTAGA+TGG + chr1_4:36659655-36659674 None:intergenic 45.0%
CCATCTACTCAACGACTCTA+AGG - chr1_4:36659652-36659671 Msa0161380:CDS 45.0%
CAGGATGCCTTATGGTAACA+AGG + chr1_4:36659680-36659699 None:intergenic 45.0%
CCCCAGTTGAACGATTTCAA+AGG - chr1_4:36659775-36659794 Msa0161380:intron 45.0%
! CTTTTACTGCACCAGCAAAC+AGG + chr1_4:36659858-36659877 None:intergenic 45.0%
! GAGCATTGCTGCTTGTAAGA+TGG + chr1_4:36659903-36659922 None:intergenic 45.0%
TACTTGCCGACGAACAATTG+CGG + chr1_4:36659961-36659980 None:intergenic 45.0%
GGCAAGTATATTTCCCAGAC+AGG - chr1_4:36659973-36659992 Msa0161380:CDS 45.0%
CATCTTGTCAACTCGTAGTG+GGG - chr1_4:36660232-36660251 Msa0161380:intron 45.0%
ATCTTGTCAACTCGTAGTGG+GGG - chr1_4:36660233-36660252 Msa0161380:intron 45.0%
TAGTGACTGGAATCCTGCTA+TGG - chr1_4:36660301-36660320 Msa0161380:intron 45.0%
!! TGAGCTTGTTGATCCATAGC+AGG + chr1_4:36660317-36660336 None:intergenic 45.0%
ATATATGGACTTCACGCGTC+TGG + chr1_4:36660361-36660380 None:intergenic 45.0%
!! GATTAGTGAGAGCACCATTG+AGG - chr1_4:36660388-36660407 Msa0161380:intron 45.0%
GATCTGGTTATACAGAGTGG+GGG - chr1_4:36660452-36660471 Msa0161380:intron 45.0%
CAGAAACTTCTCCACTGTTC+TGG + chr1_4:36660571-36660590 None:intergenic 45.0%
TTCCAGTTCACGTGTCTTCA+GGG + chr1_4:36660654-36660673 None:intergenic 45.0%
GATGATGAGCCTCAAGAGTT+GGG - chr1_4:36660746-36660765 Msa0161380:intron 45.0%
ACAGATTCACCCAACTCTTG+AGG + chr1_4:36660758-36660777 None:intergenic 45.0%
GCGGGTAGTTTATCTTCGTT+AGG + chr1_4:36660827-36660846 None:intergenic 45.0%
ATCATCCTTGGCAACAACAG+CGG + chr1_4:36660846-36660865 None:intergenic 45.0%
! GGATGATGATGTTGACATGC+TGG - chr1_4:36660859-36660878 Msa0161380:intron 45.0%
! GAATGGCGTATCGGTCAATA+GGG + chr1_4:36660958-36660977 None:intergenic 45.0%
!! CCACAGCTCTAGAAAACGAA+TGG + chr1_4:36660975-36660994 None:intergenic 45.0%
!!! CCATTCGTTTTCTAGAGCTG+TGG - chr1_4:36660972-36660991 Msa0161380:intron 45.0%
AATCCTGGCTTCAGATTCCA+AGG + chr1_4:36661020-36661039 None:intergenic 45.0%
GGGAATTGGATCGCATTGAA+AGG - chr1_4:36661053-36661072 Msa0161380:intron 45.0%
AGCCGAAATTGACGAAGATG+AGG - chr1_4:36661093-36661112 Msa0161380:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_4:36661366-36661385 Msa0161380:intron 45.0%
TCTTGGCCTGTATATTAGGC+TGG - chr1_4:36661564-36661583 Msa0161380:intron 45.0%
CTTGGCCTGTATATTAGGCT+GGG - chr1_4:36661565-36661584 Msa0161380:intron 45.0%
AGCATCCCAGCCTAATATAC+AGG + chr1_4:36661573-36661592 None:intergenic 45.0%
!! TTCCTGACTTGTTGTGGTTG+TGG - chr1_4:36661683-36661702 Msa0161380:intron 45.0%
AACCACAACCACAACAAGTC+AGG + chr1_4:36661688-36661707 None:intergenic 45.0%
GCTTGAGTCCTGCTGAAAAA+TGG + chr1_4:36662045-36662064 None:intergenic 45.0%
TTTGCGGCTGATCAAAGCTT+AGG - chr1_4:36662576-36662595 Msa0161380:CDS 45.0%
GCTGATCAAAGCTTAGGCAT+AGG - chr1_4:36662582-36662601 Msa0161380:intron 45.0%
CAGAATGTTGGAGGCTTAAG+AGG - chr1_4:36662685-36662704 Msa0161380:intron 45.0%
GGCTTAAGAGGACACTTGAT+TGG - chr1_4:36662697-36662716 Msa0161380:intron 45.0%
CGGAACACCACAACTCATAT+TGG - chr1_4:36662730-36662749 Msa0161380:CDS 45.0%
!! AAAAAAAAAAAAAAAAAAAG+AGG + chr1_4:36655531-36655550 None:intergenic 5.0%
!!! TTATTATTTTTTTTTTTTTG+AGG - chr1_4:36657116-36657135 Msa0161380:CDS 5.0%
!!! TATTATTTTTTTTTTTTTGA+GGG - chr1_4:36657117-36657136 Msa0161380:CDS 5.0%
CCACCATCTTCACTACTCTC+TGG + chr1_4:36654993-36655012 None:intergenic 50.0%
CCAGAGAGTAGTGAAGATGG+TGG - chr1_4:36654990-36655009 Msa0161380:intron 50.0%
AACTGGTGATCCTGATGGTC+AGG - chr1_4:36655025-36655044 Msa0161380:intron 50.0%
GCAAGTTCTTCCTGACCATC+AGG + chr1_4:36655038-36655057 None:intergenic 50.0%
GGTCAGGAAGAACTTGCATC+AGG - chr1_4:36655041-36655060 Msa0161380:intron 50.0%
AACTTACACAACGTCGACCG+AGG + chr1_4:36655230-36655249 None:intergenic 50.0%
GGAAGGTAGAGAGAGAACAG+TGG + chr1_4:36655785-36655804 None:intergenic 50.0%
AGAGAGAGAGAGTGAGAGGA+AGG + chr1_4:36655802-36655821 None:intergenic 50.0%
TGAGAGAGAGAGAGAGTGAG+AGG + chr1_4:36655806-36655825 None:intergenic 50.0%
CTCACTCTCTCTCTCTCTCA+TGG - chr1_4:36655806-36655825 Msa0161380:intron 50.0%
AATCTGTGGATACAGTCGGC+CGG + chr1_4:36656207-36656226 None:intergenic 50.0%
TCACGCTTGTGTTAAGCCAG+TGG - chr1_4:36656350-36656369 Msa0161380:intron 50.0%
!! AGTGGTGGACCAACCTGAAT+GGG - chr1_4:36656368-36656387 Msa0161380:intron 50.0%
TCTGTGAGAACGGATCAACC+TGG + chr1_4:36656394-36656413 None:intergenic 50.0%
AAACAAGGCAGCTGAGGATG+TGG - chr1_4:36657083-36657102 Msa0161380:CDS 50.0%
AACAAGGCAGCTGAGGATGT+GGG - chr1_4:36657084-36657103 Msa0161380:CDS 50.0%
GTAGACGGATAACTTGGAGG+TGG - chr1_4:36657236-36657255 Msa0161380:CDS 50.0%
CAAGACCTTGCTGAGGTTGT+GGG + chr1_4:36657280-36657299 None:intergenic 50.0%
CACAACCTCAGCAAGGTCTT+GGG - chr1_4:36657279-36657298 Msa0161380:CDS 50.0%
ACAACCTCAGCAAGGTCTTG+GGG - chr1_4:36657280-36657299 Msa0161380:CDS 50.0%
AGAGAGTGACATGCCTGTTG+AGG - chr1_4:36657928-36657947 Msa0161380:CDS 50.0%
CTTGCAAGCAGTTCCTCAAC+AGG + chr1_4:36657944-36657963 None:intergenic 50.0%
CTGTTGAGGAACTGCTTGCA+AGG - chr1_4:36657942-36657961 Msa0161380:CDS 50.0%
CCTGATCCCAATCATCACTC+AGG + chr1_4:36658069-36658088 None:intergenic 50.0%
CCTGAGTGATGATTGGGATC+AGG - chr1_4:36658066-36658085 Msa0161380:CDS 50.0%
!! CATGGACTGGTGAATTCTGC+TGG + chr1_4:36658129-36658148 None:intergenic 50.0%
TACGGTAGCCAGTTTCTCAC+CGG + chr1_4:36658203-36658222 None:intergenic 50.0%
TTGGCAGATGAAATGGGGCT+TGG - chr1_4:36658463-36658482 Msa0161380:CDS 50.0%
TGCACATCTTGCCTGCGAAA+AGG - chr1_4:36658513-36658532 Msa0161380:CDS 50.0%
GCACATCTTGCCTGCGAAAA+GGG - chr1_4:36658514-36658533 Msa0161380:CDS 50.0%
CACATCTTGCCTGCGAAAAG+GGG - chr1_4:36658515-36658534 Msa0161380:CDS 50.0%
TTGCCTGCGAAAAGGGGATT+TGG - chr1_4:36658521-36658540 Msa0161380:CDS 50.0%
TGCCTGCGAAAAGGGGATTT+GGG - chr1_4:36658522-36658541 Msa0161380:CDS 50.0%
! GACCTATTTCGGAAGCGCAA+AGG - chr1_4:36658630-36658649 Msa0161380:CDS 50.0%
CTCCTTTGCGCTTCCGAAAT+AGG + chr1_4:36658635-36658654 None:intergenic 50.0%
CCCTCGACCATTCCTGATAT+AGG + chr1_4:36658973-36658992 None:intergenic 50.0%
ACGGACGAAGGACATTATGC+AGG + chr1_4:36659029-36659048 None:intergenic 50.0%
GTCCGGGCTTAATTACTTCC+AGG + chr1_4:36659494-36659513 None:intergenic 50.0%
AACGTGCAGCAGCTATTGCA+TGG - chr1_4:36659601-36659620 Msa0161380:CDS 50.0%
! TTGCATGGTGGAACTCCTTG+AGG - chr1_4:36659616-36659635 Msa0161380:CDS 50.0%
TACTGCACCAGCAAACAGGA+GGG + chr1_4:36659854-36659873 None:intergenic 50.0%
TTACTGCACCAGCAAACAGG+AGG + chr1_4:36659855-36659874 None:intergenic 50.0%
ACTTGCCGACGAACAATTGC+GGG + chr1_4:36659960-36659979 None:intergenic 50.0%
! AGGAGCTAGCGATTTTGCTG+AGG - chr1_4:36660027-36660046 Msa0161380:intron 50.0%
AGATGGATCAACCCAACCAG+AGG - chr1_4:36660157-36660176 Msa0161380:intron 50.0%
ATTAAGGTCTGCCTCTCCTC+TGG + chr1_4:36660176-36660195 None:intergenic 50.0%
!! CAAGATCGGTGCCACAGAAT+TGG - chr1_4:36660335-36660354 Msa0161380:CDS 50.0%
! AAAGCGCGCACTTGATGATC+TGG - chr1_4:36660436-36660455 Msa0161380:intron 50.0%
CTTCCAGTTCACGTGTCTTC+AGG + chr1_4:36660655-36660674 None:intergenic 50.0%
ACGTGAACTGGAAGAAGCTG+TGG - chr1_4:36660661-36660680 Msa0161380:intron 50.0%
GGAAGAAGCTGTGGATAACC+AGG - chr1_4:36660670-36660689 Msa0161380:intron 50.0%
ATCCTCTTCAAGTCTCCCAC+TGG + chr1_4:36660711-36660730 None:intergenic 50.0%
GGATGATGAGCCTCAAGAGT+TGG - chr1_4:36660745-36660764 Msa0161380:intron 50.0%
TCATCCTTGGCAACAACAGC+GGG + chr1_4:36660845-36660864 None:intergenic 50.0%
GCTGGCAGATGTCAAACAGA+TGG - chr1_4:36660877-36660896 Msa0161380:intron 50.0%
GGCAGATGTCAAACAGATGG+CGG - chr1_4:36660880-36660899 Msa0161380:intron 50.0%
AGGGCGTAGCTCATTCTCAA+AGG + chr1_4:36660939-36660958 None:intergenic 50.0%
! CGAATGGCGTATCGGTCAAT+AGG + chr1_4:36660959-36660978 None:intergenic 50.0%
! GGAATCTGAAGCCAGGATTG+AGG - chr1_4:36661021-36661040 Msa0161380:CDS 50.0%
CAGGATTGAGGACACAGAGT+GGG - chr1_4:36661033-36661052 Msa0161380:intron 50.0%
TGAGGACACAGAGTGGGAAT+TGG - chr1_4:36661039-36661058 Msa0161380:intron 50.0%
TTCTGCACGTTCATCAGACC+TGG - chr1_4:36661285-36661304 Msa0161380:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG + chr1_4:36661365-36661384 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_4:36661368-36661387 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_4:36661365-36661384 Msa0161380:intron 50.0%
GCAACCCACTTAGTGGGATA+AGG + chr1_4:36661373-36661392 None:intergenic 50.0%
GGACAAGCAACCCACTTAGT+GGG + chr1_4:36661379-36661398 None:intergenic 50.0%
AGGACAAGCAACCCACTTAG+TGG + chr1_4:36661380-36661399 None:intergenic 50.0%
GGCTTATCGTCAGCAAGTAG+AGG - chr1_4:36661607-36661626 Msa0161380:intron 50.0%
ACAGACCTGATGTTGAGCCA+AGG + chr1_4:36661633-36661652 None:intergenic 50.0%
TGGCTCAACATCAGGTCTGT+TGG - chr1_4:36661633-36661652 Msa0161380:intron 50.0%
CTCTAACCTGTGAGGCAACC+CGG - chr1_4:36656185-36656204 Msa0161380:intron 55.0%
ATCTGTGGATACAGTCGGCC+GGG + chr1_4:36656206-36656225 None:intergenic 55.0%
!! GTGAGCTGTGAGAGCACCTA+TGG + chr1_4:36656334-36656353 None:intergenic 55.0%
CGCTTGTGTTAAGCCAGTGG+TGG - chr1_4:36656353-36656372 Msa0161380:intron 55.0%
!! CATTCAGGTTGGTCCACCAC+TGG + chr1_4:36656369-36656388 None:intergenic 55.0%
!! CAGTGGTGGACCAACCTGAA+TGG - chr1_4:36656367-36656386 Msa0161380:intron 55.0%
TCAACCTGGCCCATTCAGGT+TGG + chr1_4:36656380-36656399 None:intergenic 55.0%
TGGATCCCACAACCTCAGCA+AGG - chr1_4:36657272-36657291 Msa0161380:CDS 55.0%
CCAAGACCTTGCTGAGGTTG+TGG + chr1_4:36657281-36657300 None:intergenic 55.0%
CCACAACCTCAGCAAGGTCT+TGG - chr1_4:36657278-36657297 Msa0161380:CDS 55.0%
CTCTTCTGCCTGGGTCTGTA+CGG + chr1_4:36658221-36658240 None:intergenic 55.0%
GCCTGCGAAAAGGGGATTTG+GGG - chr1_4:36658523-36658542 Msa0161380:CDS 55.0%
! ACCCCAAATCCCCTTTTCGC+AGG + chr1_4:36658527-36658546 None:intergenic 55.0%
ATCAGGAATGGTCGAGGGAG+AGG - chr1_4:36658975-36658994 Msa0161380:CDS 55.0%
GACGGAGTAAGAACGGACGA+AGG + chr1_4:36659041-36659060 None:intergenic 55.0%
GTAGGCTGTCAAAGAGGCAG+AGG - chr1_4:36659118-36659137 Msa0161380:CDS 55.0%
CGATTGGACGGCCCTCAAAT+AGG + chr1_4:36659260-36659279 None:intergenic 55.0%
GTGCAGCAGCTATTGCATGG+TGG - chr1_4:36659604-36659623 Msa0161380:CDS 55.0%
AGCAAACAGGAGGGGATGCT+CGG + chr1_4:36659845-36659864 None:intergenic 55.0%
ACTGCACCAGCAAACAGGAG+GGG + chr1_4:36659853-36659872 None:intergenic 55.0%
CGAACAATTGCGGGCCTGAT+GGG + chr1_4:36659951-36659970 None:intergenic 55.0%
ACGAACAATTGCGGGCCTGA+TGG + chr1_4:36659952-36659971 None:intergenic 55.0%
TCAGGCCCGCAATTGTTCGT+CGG - chr1_4:36659952-36659971 Msa0161380:intron 55.0%
GATCAACCCAACCAGAGGAG+AGG - chr1_4:36660162-36660181 Msa0161380:intron 55.0%
! TCAACTCGTAGTGGGGGTGT+TGG - chr1_4:36660239-36660258 Msa0161380:intron 55.0%
AGCCAGTGGGAGACTTGAAG+AGG - chr1_4:36660706-36660725 Msa0161380:intron 55.0%
ACTACCCGCTGTTGTTGCCA+AGG - chr1_4:36660838-36660857 Msa0161380:intron 55.0%
! CAGCCTTGGAATCTGAAGCC+AGG - chr1_4:36661014-36661033 Msa0161380:CDS 55.0%
CCACTCTGTGTCCTCAATCC+TGG + chr1_4:36661035-36661054 None:intergenic 55.0%
CCAGGATTGAGGACACAGAG+TGG - chr1_4:36661032-36661051 Msa0161380:intron 55.0%
TCGTCAGCAAGTAGAGGCCT+TGG - chr1_4:36661613-36661632 Msa0161380:intron 55.0%
AGAGGCCTTGGCTCAACATC+AGG - chr1_4:36661625-36661644 Msa0161380:intron 55.0%
! GGCTTGGGCTTTGACTCACT+TGG + chr1_4:36662069-36662088 None:intergenic 55.0%
AACGACTCCAGCACGGTCCT+CGG - chr1_4:36655210-36655229 Msa0161380:intron 60.0%
TGGACCAACCTGAATGGGCC+AGG - chr1_4:36656373-36656392 Msa0161380:intron 60.0%
CGGATCAACCTGGCCCATTC+AGG + chr1_4:36656384-36656403 None:intergenic 60.0%
ACTGCCCCAAGACCTTGCTG+AGG + chr1_4:36657287-36657306 None:intergenic 60.0%
ACTGGCTACCGTACAGACCC+AGG - chr1_4:36658210-36658229 Msa0161380:CDS 60.0%
ACAGACCCAGGCAGAAGAGC+AGG - chr1_4:36658222-36658241 Msa0161380:CDS 60.0%
CAGACCCAGGCAGAAGAGCA+GGG - chr1_4:36658223-36658242 Msa0161380:CDS 60.0%
AGACCCAGGCAGAAGAGCAG+GGG - chr1_4:36658224-36658243 Msa0161380:CDS 60.0%
TTCCCCCTGCTCTTCTGCCT+GGG + chr1_4:36658230-36658249 None:intergenic 60.0%
GGACGGCCCTCAAATAGGTC+AGG + chr1_4:36659255-36659274 None:intergenic 60.0%
! ACGCACTGATAGGGCTGACC+TGG - chr1_4:36659473-36659492 Msa0161380:CDS 60.0%
GCAAACAGGAGGGGATGCTC+GGG + chr1_4:36659844-36659863 None:intergenic 60.0%
GAGCATCCCCTCCTGTTTGC+TGG - chr1_4:36659844-36659863 Msa0161380:intron 60.0%
GGTCTGCCTCTCCTCTGGTT+GGG + chr1_4:36660171-36660190 None:intergenic 60.0%
AGGTCTGCCTCTCCTCTGGT+TGG + chr1_4:36660172-36660191 None:intergenic 60.0%
CACGCGTCTGGCCAATTCTG+TGG + chr1_4:36660349-36660368 None:intergenic 60.0%
GGCCCTGAAGACACGTGAAC+TGG - chr1_4:36660649-36660668 Msa0161380:intron 60.0%
CGAGCTACGAGCAGTGCCAA+TGG - chr1_4:36662167-36662186 Msa0161380:intron 60.0%
GACCCAGGCAGAAGAGCAGG+GGG - chr1_4:36658225-36658244 Msa0161380:CDS 65.0%
CTTCCCCCTGCTCTTCTGCC+TGG + chr1_4:36658231-36658250 None:intergenic 65.0%
AACAGGAGGGGATGCTCGGG+CGG + chr1_4:36659841-36659860 None:intergenic 65.0%
AGCTGCAGCTGCAGCTGGAC+AGG - chr1_4:36660904-36660923 Msa0161380:intron 65.0%
ACGTCGACCGAGGACCGTGC+TGG + chr1_4:36655220-36655239 None:intergenic 70.0%
AGTCGGCCGGGTTGCCTCAC+AGG + chr1_4:36656194-36656213 None:intergenic 70.0%
GCGGAAGCTGCAGCTGCAGC+TGG - chr1_4:36660899-36660918 Msa0161380:intron 70.0%
! GGAGGGGATGCTCGGGCGGC+AGG + chr1_4:36659837-36659856 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 36654939 36662829 36654939 ID=Msa0161380;Name=Msa0161380
chr1_4 mRNA 36654939 36662829 36654939 ID=Msa0161380-mRNA-1;Parent=Msa0161380;Name=Msa0161380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|0.83|1|1|12|0|1404
chr1_4 exon 36662706 36662829 36662706 ID=Msa0161380-mRNA-1:exon:10836;Parent=Msa0161380-mRNA-1
chr1_4 exon 36662526 36662596 36662526 ID=Msa0161380-mRNA-1:exon:10835;Parent=Msa0161380-mRNA-1
chr1_4 exon 36662308 36662442 36662308 ID=Msa0161380-mRNA-1:exon:10834;Parent=Msa0161380-mRNA-1
chr1_4 exon 36661009 36661044 36661009 ID=Msa0161380-mRNA-1:exon:10833;Parent=Msa0161380-mRNA-1
chr1_4 exon 36660308 36660394 36660308 ID=Msa0161380-mRNA-1:exon:10832;Parent=Msa0161380-mRNA-1
chr1_4 exon 36659969 36660037 36659969 ID=Msa0161380-mRNA-1:exon:10831;Parent=Msa0161380-mRNA-1
chr1_4 exon 36659795 36659857 36659795 ID=Msa0161380-mRNA-1:exon:10830;Parent=Msa0161380-mRNA-1
chr1_4 exon 36656635 36659704 36656635 ID=Msa0161380-mRNA-1:exon:10829;Parent=Msa0161380-mRNA-1
chr1_4 exon 36656122 36656186 36656122 ID=Msa0161380-mRNA-1:exon:10828;Parent=Msa0161380-mRNA-1
chr1_4 exon 36655968 36656026 36655968 ID=Msa0161380-mRNA-1:exon:10827;Parent=Msa0161380-mRNA-1
chr1_4 exon 36655344 36655715 36655344 ID=Msa0161380-mRNA-1:exon:10826;Parent=Msa0161380-mRNA-1
chr1_4 exon 36654939 36655002 36654939 ID=Msa0161380-mRNA-1:exon:10825;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36662706 36662829 36662706 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36662526 36662596 36662526 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36662308 36662442 36662308 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36661009 36661044 36661009 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36660308 36660394 36660308 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36659969 36660037 36659969 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36659795 36659857 36659795 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36656635 36659704 36656635 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36656122 36656186 36656122 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36655968 36656026 36655968 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36655344 36655715 36655344 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
chr1_4 CDS 36654939 36655002 36654939 ID=Msa0161380-mRNA-1:cds;Parent=Msa0161380-mRNA-1
Gene Sequence

>Msa0161380

ATGCCATTGGTTTCTTTGCAATTAGGAGAATTGGCAAGGCAGGAAAGTAGTCCAGAGAGTAGTGAAGATGGTGGACAAATAGTTAGAACTGGTGATCCTGATGGTCAGGAAGAACTTGCATCAGAAAATGGAGATCATATATCTATCAGCGAAATATGTACAAACGACTCCAGCACGGTCCTCGGTCGACGTTGTGATGACAGTAACGGTGATGTAGCTACACCAACAAATAATCTATCTCAAAATGAGGTTCATCAATCTGAAAATCTCAAAGAGGTTCCCAGTGAGACAGCCAATGAAAATGTTCCATTTGATTTTTCTGACGAAGAGGAAGACGGTGACTTTTTGTTTGGCACAGAGGATAAGTGTCCTCTAGTATGTGCAAATCAAGGCTTTGCACATGAAGAGAAGCAGACCTTTGCTATTAGTTGTGTAACAGATGAACGGCTAGATGACGATGAAACAACCTTATCCGAGGAAGAAAAACTGGACAGAGTTGATGCAATTGATCCAAAGGATGAGATTGCATTACTACAAAAAGAGAGTGACATGCCTGTTGAGGAACTGCTTGCAAGGTATAAAAAGGACCTGAGTGATGATTGGGATCAGGAAGATGAGTCAGATTGTGCTTCTGCTTCATCAGAAGACCAGCAGAATTCACCAGTCCATGATAATGCTAAGCAGAAAGATCCTGATATTTCTGTGGATGAAGATATGAATTCCGGTGAGAAACTGGCTACCGTACAGACCCAGGCAGAAGAGCAGGGGGAAGCACCTTGTGAAAATTCAGAGGAAAGAGAAAGTGAGGATATAATTGCTGATGCAGCTGCTGCTGCAAGATCAGTACAACCAACTGGAAACACTTTCTCCACAACTAAAGTGCGTACAAAATTTCCCTTTCTACTCAAGTACTCTCTTCGTGAATATCAACATATTGGATTGGATTGGCTCGTAACAATGTATGAAAAAAAGCTGAATGGCATTTTGGCAGATGAAATGGGGCTTGGAAAAACCATTATGACTATAGCTTTGCTTGCACATCTTGCCTGCGAAAAGGGGATTTGGGGTCCACATCTAATTGTGGTGCCAACTAGTGTGATGCTTAACTGGGAGACTGAATTTCTGAAATGGTGTCCTGCGTTCAAAATTTTGACCTATTTCGGAAGCGCAAAGGAGCGAAAACATAAAAGACAAGGATGGTTAAAACCAAACTCATTTCATGTGTGCATAACAACTTATAGATTAGTTATTCAGGATTCCAAAGTTTTCAAGCGCAAAAAGTGGAAATACTTGATCTTGGATGAAGCTCACCTCATTAAAAATTGGAAATCACAAAGGTGGCAGACACTGTTGAATTTCAATTCAAAACGACGAATTCTGTTGACTGGTACACCACTACAGAATGATCTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGCCCCATGTTTTCCAGTCACACCAAGAGTTTAAGGATTGGTTTTGCAATCCTATATCAGGAATGGTCGAGGGAGAGGAAAAAGTTAATAAGGAGGTTGTAGATCGCCTGCATAATGTCCTTCGTCCGTTCTTACTCCGTCGATTGAAGAGAGATGTAGAAAAGCAACTTCCAATGAAACATGAGCATGTCATATACTGTAGGCTGTCAAAGAGGCAGAGGAATTTGTACGAAGATTTTATTGCTAGCTCAGAGACTCAAGCTACTCTTGCAAATGCCAATTTTTTTGGGATGATTAGTATCATCATGCAACTTCGCAAGGTTTGTAATCATCCTGACCTATTTGAGGGCCGTCCAATCGTCAGTTCTTTTGATATGTGTGGGATTCATACTCAGTTAAGTTCTTCTATTTGCTCCATGCTTTTGCCTAGCTCCTTTTCTACAGTCGACTTAGAAGGTTTGGGTCTTCGATTTACTCATCTTGACTATAGCATGACATCTTGGGAGAGTGATGAAGTGCAAGCTATTGAGACCCCTGCAACTTTAATTATGGAACGCACTGATAGGGCTGACCTGGAAGTAATTAAGCCCGGACTGAAATGTCAGAAAAAGCAGTTAGGAACAAACATTTTTGAAGAGATTCAAAAGGCAATTTGGGAAGAGAGGATAAGAGAGGCAAAGGAACGTGCAGCAGCTATTGCATGGTGGAACTCCTTGAGGTGTAAAAAAAGACCCATCTACTCAACGACTCTAAGGGACCTTGTTACCATAAGGCATCCTGTATATGATATTCATCAAAAGAAGGCAAACCCTGTTTCATACTTGTTCCCATCAAAACTGGCTGACATTGTTCTCTCCCCAGTTGAACGATTTCAAAGGATGATTGATGTGGTTGAAAGTTTCATGTTTGCGATTCCTGCCGCCCGAGCATCCCCTCCTGTTTGCTGGTGCAGTAAAAGCGAGACAACAGTGTTTCTGCACCCATCTTACAAGCAGCAATGCTCTGATATTCTGTCACCACTATTGTCACCCATCAGGCCCGCAATTGTTCGTCGGCAAGTATATTTCCCAGACAGGCGACTTATACAATTCGACTGTGGAAAATTGCAGGAGCTAGCGATTTTGCTGAGGAAATTAAAATCAGAAGGTCACCGAGCTCTGATATTCACTCAAATGACGAAGATGCTTGACATATTAGAAGCCTTCATTAATTTGTATGGTTATACTTACATGCGCTTAGATGGATCAACCCAACCAGAGGAGAGGCAGACCTTAATGCAGCGTTTTAACACAAACCCCAAATATTTTCTTTTCATCTTGTCAACTCGTAGTGGGGGTGTTGGTATCAATCTAGTTGGAGCTGACACAGTTATTTTTTATGATAGTGACTGGAATCCTGCTATGGATCAACAAGCTCAAGATCGGTGCCACAGAATTGGCCAGACGCGTGAAGTCCATATATATCGATTGATTAGTGAGAGCACCATTGAGGAGAATATTTTGAAGAAAGCAAAGCAAAAGCGCGCACTTGATGATCTGGTTATACAGAGTGGGGGTTATAATACTGAGTTCTTTAAGAAGCTTGATCCTATGGAACTATTTTCAGGTCATAGAACACTCTCAATTAAAGATACGCCGAAGGAGAAAAACCAGAACAGTGGAGAAGTTTCTGTAACTAATGCAGATGTAGATGCTGCATTAAAACATGTTGAAGATGAGGCAGATTATATGGCCCTGAAGACACGTGAACTGGAAGAAGCTGTGGATAACCAGGAATTTACAGAAGAAGCCAGTGGGAGACTTGAAGAGGATGAGTATGTAAATGAGGATGATGAGCCTCAAGAGTTGGGTGAATCTGTCTCCAATTTGAATAAAGAGAATGAATTAATGTTAAATGGAGGTGATCCTAACGAAGATAAACTACCCGCTGTTGTTGCCAAGGATGATGATGTTGACATGCTGGCAGATGTCAAACAGATGGCGGAAGCTGCAGCTGCAGCTGGACAGGCTTTATCAGCCTTTGAGAATGAGCTACGCCCTATTGACCGATACGCCATTCGTTTTCTAGAGCTGTGGGATCCAATTATAGATAAAGCAGCCTTGGAATCTGAAGCCAGGATTGAGGACACAGAGTGGGAATTGGATCGCATTGAAAGGTATAAGGAGGAGATGGAAGCCGAAATTGACGAAGATGAGGAGCCTCTTGTATATGAAAGCTGGGATGCTGATTTTGCAACAACGGCTTATCGTCAGCAAGTAGAGGCCTTGGCTCAACATCAGTTAATGGAGGAACTTGAATATGAAGCTAAACTGAAAGAGGAAGCTGAAGCAGATAAAAACAGGACTCAAGCACCAAGTGAGTCAAAGCCCAAGCCTAAAAAGAAACCAAAGAAAACAAAGTTCAAATCTCTGAAGAAAGGATCTCTAACCTCTGGTGTAAGAACTGTGAAAGACGAGCTACGAGCAGTGCCAATGGTCATAGATGACGATGATGTTGTCACTAGTCCTGATTTTGTGTCTCCAAGTTCAAGTATGCATAAAAAACGCAAGAAGTCTAAATTAACAGCTGATGGTGAAGAAGAAAAGAGATCTAAGAAGTCCAAAAAGTCCAAGAGGGATCTTATTGACATCTATGATTCAGATTTAGAATCCAACTCGTTAGATATGCAGGATGAACATGCAGAATCAGATCCATATAAAAGTCTGGTTGTACTATTTCTTGATGATGTCAATGAGGACGCAAGATTGCAAAACTCTCCTCTTACGTCGCAATAA
Protein sequence

>Msa0161380

MPLVSLQLGELARQESSPESSEDGGQIVRTGDPDGQEELASENGDHISISEICTNDSSTVLGRRCDDSNGDVATPTNNLSQNEVHQSENLKEVPSETANENVPFDFSDEEEDGDFLFGTEDKCPLVCANQGFAHEEKQTFAISCVTDERLDDDETTLSEEEKLDRVDAIDPKDEIALLQKESDMPVEELLARYKKDLSDDWDQEDESDCASASSEDQQNSPVHDNAKQKDPDISVDEDMNSGEKLATVQTQAEEQGEAPCENSEERESEDIIADAAAAARSVQPTGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLANANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIHTQLSSSICSMLLPSSFSTVDLEGLGLRFTHLDYSMTSWESDEVQAIETPATLIMERTDRADLEVIKPGLKCQKKQLGTNIFEEIQKAIWEERIREAKERAAAIAWWNSLRCKKRPIYSTTLRDLVTIRHPVYDIHQKKANPVSYLFPSKLADIVLSPVERFQRMIDVVESFMFAIPAARASPPVCWCSKSETTVFLHPSYKQQCSDILSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAKQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLSIKDTPKEKNQNSGEVSVTNADVDAALKHVEDEADYMALKTRELEEAVDNQEFTEEASGRLEEDEYVNEDDEPQELGESVSNLNKENELMLNGGDPNEDKLPAVVAKDDDVDMLADVKQMAEAAAAAGQALSAFENELRPIDRYAIRFLELWDPIIDKAALESEARIEDTEWELDRIERYKEEMEAEIDEDEEPLVYESWDADFATTAYRQQVEALAQHQLMEELEYEAKLKEEAEADKNRTQAPSESKPKPKKKPKKTKFKSLKKGSLTSGVRTVKDELRAVPMVIDDDDVVTSPDFVSPSSSMHKKRKKSKLTADGEEEKRSKKSKKSKRDLIDIYDSDLESNSLDMQDEHAESDPYKSLVVLFLDDVNEDARLQNSPLTSQ*