AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222160 MtrunA17_Chr2g0327001 89.548 708 22 2 1 658 1 706 0.0 1249
Msa0222160 MtrunA17_Chr2g0326991 93.538 325 17 2 643 963 12 336 0.0 635
Msa0222160 MtrunA17_Chr7g0264371 40.749 454 240 5 495 944 457 885 1.60e-93 325
Msa0222160 MtrunA17_Chr4g0052341 31.198 359 210 9 513 857 949 1284 5.35e-37 151
Msa0222160 MtrunA17_Chr3g0137091 27.715 267 163 7 526 787 515 756 7.94e-23 105
Msa0222160 MtrunA17_Chr4g0066741 29.897 291 162 11 515 796 384 641 1.00e-22 105
Msa0222160 MtrunA17_Chr5g0442141 27.642 246 160 4 542 787 851 1078 1.13e-22 105
Msa0222160 MtrunA17_Chr3g0095091 28.862 246 157 5 542 787 805 1032 2.36e-22 104
Msa0222160 MtrunA17_Chr1g0205891 29.412 221 128 5 580 800 650 842 9.11e-21 98.6
Msa0222160 MtrunA17_Chr5g0394201 28.054 221 130 5 580 800 637 828 3.94e-20 96.7
Msa0222160 MtrunA17_Chr7g0231521 29.148 223 120 6 579 790 248 443 1.03e-18 91.7
Msa0222160 MtrunA17_Chr2g0286291 30.584 291 160 11 515 796 387 644 1.78e-18 91.3
Msa0222160 MtrunA17_Chr7g0232121 28.378 222 121 6 580 790 328 522 2.72e-18 90.5
Msa0222160 MtrunA17_Chr4g0066651 26.396 197 125 4 580 776 1266 1442 4.37e-18 90.5
Msa0222160 MtrunA17_Chr5g0403921 28.500 200 116 5 580 777 467 641 5.68e-16 82.8
Msa0222160 MtrunA17_Chr5g0393461 26.341 205 135 5 581 776 476 673 5.84e-15 79.7
Msa0222160 MtrunA17_Chr4g0028821 36.364 209 118 5 265 459 33 240 9.13e-15 79.3
Msa0222160 MtrunA17_Chr7g0257101 31.169 154 97 3 633 786 1191 1335 1.71e-14 78.6
Msa0222160 MtrunA17_Chr1g0175191 33.117 154 94 4 634 787 1062 1206 9.49e-14 76.3
Msa0222160 MtrunA17_Chr7g0248031 26.519 181 106 4 586 766 1292 1445 1.50e-13 75.5
Msa0222160 MtrunA17_Chr8g0348721 25.967 181 107 4 586 766 1284 1437 2.44e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222160 AT1G08060.1 31.635 942 508 30 38 945 30 869 1.30e-90 318
Msa0222160 AT1G08060.2 31.635 942 508 30 38 945 30 869 1.30e-90 318
Msa0222160 AT1G08060.3 31.601 943 508 31 38 945 30 870 1.02e-89 315
Msa0222160 AT5G44800.1 32.166 314 182 8 507 812 887 1177 1.33e-37 154
Msa0222160 AT2G25170.1 28.195 266 163 7 526 787 499 740 2.90e-24 110
Msa0222160 AT2G25170.4 28.195 266 163 7 526 787 499 740 2.90e-24 110
Msa0222160 AT2G25170.2 28.195 266 163 7 526 787 516 757 3.55e-24 110
Msa0222160 AT2G25170.3 28.195 266 163 7 526 787 525 766 4.48e-24 110
Msa0222160 AT4G31900.1 28.731 268 162 6 548 812 456 697 1.59e-23 108
Msa0222160 AT4G31900.3 28.731 268 162 6 548 812 456 697 1.68e-23 108
Msa0222160 AT2G13370.1 29.675 246 153 6 542 787 859 1084 1.86e-23 108
Msa0222160 AT2G13370.2 29.675 246 153 6 542 787 859 1084 1.86e-23 108
Msa0222160 AT2G13370.3 29.675 246 153 6 542 787 859 1084 1.86e-23 108
Msa0222160 AT4G31900.2 28.731 268 162 6 548 812 415 656 3.36e-23 107
Msa0222160 AT3G06010.1 30.317 221 126 6 580 800 677 869 1.24e-21 102
Msa0222160 AT5G19310.2 27.239 268 145 7 580 847 395 612 2.15e-20 97.8
Msa0222160 AT5G19310.1 27.239 268 145 7 580 847 659 876 2.50e-20 97.8
Msa0222160 AT2G44980.1 30.476 210 119 6 580 789 331 513 8.23e-20 95.9
Msa0222160 AT2G44980.3 29.545 220 118 7 580 789 339 531 1.49e-18 91.7
Msa0222160 AT2G44980.2 29.545 220 118 7 580 789 340 532 1.89e-18 91.7
Msa0222160 AT3G06400.3 29.010 293 162 11 515 796 385 642 3.61e-16 84.3
Msa0222160 AT3G06400.1 29.010 293 162 11 515 796 385 642 3.96e-16 84.0
Msa0222160 AT3G06400.2 29.010 293 162 11 515 796 385 642 4.07e-16 84.0
Msa0222160 AT2G28290.5 25.000 200 124 4 580 776 1032 1208 4.89e-16 84.3
Msa0222160 AT2G28290.2 25.000 200 124 4 580 776 1031 1207 4.92e-16 84.3
Msa0222160 AT2G28290.3 25.000 200 124 4 580 776 1031 1207 5.05e-16 84.3
Msa0222160 AT2G28290.4 25.000 200 124 4 580 776 1031 1207 5.05e-16 84.3
Msa0222160 AT2G28290.1 25.000 200 124 4 580 776 1031 1207 5.05e-16 84.3
Msa0222160 AT2G28290.6 25.000 200 124 4 580 776 1032 1208 5.18e-16 84.3
Msa0222160 AT5G18620.2 29.210 291 164 11 515 796 390 647 3.28e-15 81.3
Msa0222160 AT5G18620.1 29.210 291 164 11 515 796 390 647 3.62e-15 80.9
Msa0222160 AT3G19210.2 26.733 202 130 6 585 776 474 667 5.70e-15 80.1
Msa0222160 AT3G19210.1 26.733 202 130 6 585 776 476 669 5.90e-15 80.1
Msa0222160 AT3G19210.3 26.733 202 130 6 585 776 476 669 9.73e-15 79.3
Msa0222160 AT3G57300.1 31.818 154 96 3 633 786 1205 1349 2.55e-14 78.6
Msa0222160 AT3G57300.4 31.818 154 96 3 633 786 1205 1349 2.55e-14 78.6
Msa0222160 AT3G57300.2 31.818 154 96 3 633 786 1238 1382 3.17e-14 78.2
Msa0222160 AT2G46020.5 26.455 189 110 5 586 774 1278 1437 5.31e-14 77.4
Msa0222160 AT2G46020.1 26.455 189 110 5 586 774 1278 1437 5.31e-14 77.4
Msa0222160 AT2G46020.6 26.455 189 110 5 586 774 1278 1437 5.31e-14 77.4
Msa0222160 AT2G46020.2 26.455 189 110 5 586 774 1279 1438 5.36e-14 77.4
Msa0222160 AT2G46020.3 26.455 189 110 5 586 774 1279 1438 5.36e-14 77.4
Msa0222160 AT2G46020.4 26.455 189 110 5 586 774 1279 1438 5.36e-14 77.4
Msa0222160 AT3G12810.2 32.468 154 95 4 634 787 1071 1215 7.69e-13 73.6
Msa0222160 AT3G12810.1 32.468 154 95 4 634 787 1075 1219 8.10e-13 73.6
Msa0222160 AT2G18760.4 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.1 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.2 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.7 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.5 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.6 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0222160 AT2G18760.3 27.700 213 124 7 567 776 734 919 3.67e-12 71.2
Msa0222160 AT5G66750.1 27.363 201 119 5 579 777 484 659 4.46e-12 70.9

Find 216 sgRNAs with CRISPR-Local

Find 594 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGACTTTCTTCTGGTTTC+AGG 0.121014 2_1:-71171963 None:intergenic
TTGCAGCCAATTGGAGTTTC+TGG 0.127942 2_1:+71178016 Msa0222160:intron
GACTTCAATAGTAGATATTT+TGG 0.151658 2_1:+71178042 Msa0222160:CDS
GCAATCAGGCTGTCCTCTTC+TGG 0.160581 2_1:-71173166 None:intergenic
CCAATACTCAACCAACTTAT+AGG 0.217941 2_1:-71175039 None:intergenic
CTATAAGTTGGTTGAGTATT+GGG 0.266587 2_1:+71175040 Msa0222160:CDS
AATATTCATGCTCTTCTTGA+TGG 0.282167 2_1:+71174951 Msa0222160:CDS
CCACCTGCCAAATTATTAAA+AGG 0.282627 2_1:-71178796 None:intergenic
CTTGCAAATTCTCCTTTGTT+TGG 0.294283 2_1:+71178646 Msa0222160:CDS
AACACCAAAGTACCTTTCTT+TGG 0.302134 2_1:-71172254 None:intergenic
GTGATTGCCTTTCTCTTAGA+AGG 0.316007 2_1:-71173294 None:intergenic
CGCCAAAGATTGATAGTGTT+GGG 0.316629 2_1:+71175141 Msa0222160:CDS
TTCTCCTTTGTTTGGTGAGC+AGG 0.318071 2_1:+71178654 Msa0222160:CDS
AAGAGGTACCACAAACGTTT+TGG 0.320834 2_1:+71178695 Msa0222160:CDS
TACTATTGTCACCTTTGCTT+TGG 0.322894 2_1:-71172771 None:intergenic
ATGCAGTGATTGTCAGATTC+AGG 0.328298 2_1:+71170412 Msa0222160:five_prime_UTR
CTGTTGTCACCTTCCTGATT+TGG 0.329278 2_1:-71172610 None:intergenic
AAGGATGAAGAAAATAATAA+TGG 0.331335 2_1:+71171777 Msa0222160:CDS
GAGGTTGCAATTATCTTTGA+TGG 0.335688 2_1:-71171891 None:intergenic
CTTCGTGGCAGCTTGCTTCT+TGG 0.336052 2_1:-71178131 None:intergenic
GAACAATTCAGGGTCGGTTT+TGG 0.341011 2_1:-71170355 None:intergenic
GGTAGGCTCCTCCATGTTGC+TGG 0.344073 2_1:-71178624 None:intergenic
TAACCTTCCGGATTGAAATA+AGG 0.345295 2_1:-71175178 None:intergenic
ACTCTAGGATTGGCGATAAA+AGG 0.348369 2_1:+71172746 Msa0222160:CDS
CAGGGATTCTTCAATAATAT+AGG 0.350903 2_1:-71176752 None:intergenic
TGACAGACGAAGAACAATTC+AGG 0.353193 2_1:-71170366 None:intergenic
TACTGTTGTCAGCTTTGCTT+TGG 0.353876 2_1:-71172930 None:intergenic
TTTAGATAACTCATCAATCT+TGG 0.356158 2_1:-71172959 None:intergenic
GACTTCCTGCGACAAAGATT+TGG 0.357254 2_1:+71178067 Msa0222160:CDS
CAACAAGTACCTTATTCGTT+TGG 0.360471 2_1:-71173421 None:intergenic
TGGTATCAGAGGGTTACTTA+TGG 0.365527 2_1:-71170335 None:intergenic
CAATCAGGCTGTCCTCTTCT+GGG 0.365614 2_1:-71173165 None:intergenic
CCTATAAGTTGGTTGAGTAT+TGG 0.366376 2_1:+71175039 Msa0222160:CDS
CCTTTAGTAGTAAAGGTTGC+AGG 0.367068 2_1:-71176771 None:intergenic
TTTAGACAACTCATCAATCT+TGG 0.367252 2_1:-71172800 None:intergenic
AGTCATGTTCCAAACGAATA+AGG 0.367317 2_1:+71173412 Msa0222160:CDS
TGTTTGGTGAGCAGGAATTT+AGG 0.371430 2_1:+71178662 Msa0222160:CDS
TTTAGATAACTCGTCAATCT+TGG 0.373964 2_1:-71172641 None:intergenic
GACCCTTACAGACTTTCTTC+TGG 0.376367 2_1:-71171970 None:intergenic
AGGGATTCTTCAATAATATA+GGG 0.380308 2_1:-71176751 None:intergenic
AGCGACCACGCAAGTGGAAC+TGG 0.390801 2_1:+71174812 Msa0222160:CDS
TTTCTTCTGGTTTCAGGAGC+TGG 0.396574 2_1:-71171957 None:intergenic
GCCCCAACACTATCAATCTT+TGG 0.398218 2_1:-71175143 None:intergenic
AAGTGGAACTGGACACCTTA+AGG 0.400108 2_1:+71174823 Msa0222160:CDS
CCAGATCTCGTCAAAGGACT+TGG 0.402758 2_1:-71172014 None:intergenic
CCAAGTCCTTTGACGAGATC+TGG 0.414240 2_1:+71172014 Msa0222160:CDS
TCACTTGACACTTTCTCCTT+CGG 0.414496 2_1:-71174990 None:intergenic
GTCAGTAACAATGCTGGTCT+TGG 0.415618 2_1:+71173252 Msa0222160:CDS
TCAGCTTTGCTTTGGCACCT+TGG 0.418871 2_1:-71172922 None:intergenic
TCATAAGTTGGGGTGTTAGA+TGG 0.419758 2_1:-71173129 None:intergenic
TAATATTAGCAAGCCAAATC+AGG 0.420097 2_1:+71172597 Msa0222160:CDS
TTATTATATTTGACAGTGAC+TGG 0.423324 2_1:+71178245 Msa0222160:CDS
TCTAAAAGTGCAGGTTCTCT+TGG 0.425022 2_1:+71172074 Msa0222160:CDS
CCACACTAGTCTCATAAGTT+GGG 0.433671 2_1:-71173140 None:intergenic
TTATTGAATTTGCAGCCAAT+TGG 0.439698 2_1:+71178007 Msa0222160:intron
GTCTCCTCTTCGCAGCAATC+AGG 0.440266 2_1:-71173180 None:intergenic
CAACTGTCAATCTTCAAGTC+GGG 0.442138 2_1:+71178411 Msa0222160:CDS
AAGAATTGATAATTGTCTTA+CGG 0.443975 2_1:+71178105 Msa0222160:CDS
CCTGCAACCTTTACTACTAA+AGG 0.445612 2_1:+71176771 Msa0222160:CDS
AGTAACAATGCTGGTCTTGG+TGG 0.447199 2_1:+71173255 Msa0222160:CDS
AGATTATTCCAAAACGTTTG+TGG 0.448392 2_1:-71178703 None:intergenic
GTTCCTTCCTCATTATCTAA+AGG 0.450248 2_1:+71173336 Msa0222160:CDS
TCAAGGCCCTTTAGTAGTAA+AGG 0.452061 2_1:-71176778 None:intergenic
CAGTGAAAGGTGAATATAAA+CGG 0.455551 2_1:-71178339 None:intergenic
CTGCAACCTTTACTACTAAA+GGG 0.460344 2_1:+71176772 Msa0222160:CDS
GTCTTTCCAGAAACTCCAAT+TGG 0.463218 2_1:-71178022 None:intergenic
GTAACAATGCTGGTCTTGGT+GGG 0.464546 2_1:+71173256 Msa0222160:CDS
GATGCTCTCCCTTCAAAACT+AGG 0.466915 2_1:+71173381 Msa0222160:CDS
AAGTACTCGTTCTAGTCAAA+AGG 0.469700 2_1:+71171752 Msa0222160:CDS
AGGATGAAGAAAATAATAAT+GGG 0.471183 2_1:+71171778 Msa0222160:CDS
TAAAGAGAGACCGATACATC+AGG 0.472782 2_1:-71172226 None:intergenic
ACCACACTAGTCTCATAAGT+TGG 0.474423 2_1:-71173141 None:intergenic
GCAGAAAATTGTGCGACTCC+TGG 0.474505 2_1:+71173096 Msa0222160:CDS
AAGATTGACAGTTGATGTCC+AGG 0.475817 2_1:-71178402 None:intergenic
TCTGTCTCCTTTAGATAATG+AGG 0.475981 2_1:-71173343 None:intergenic
TAACCTGCCTTGATTCCATT+GGG 0.480647 2_1:-71178916 None:intergenic
TTCACCAACATCAGCTAGAC+AGG 0.482437 2_1:-71178563 None:intergenic
AAACCAGAAGAAAGTCTGTA+AGG 0.485038 2_1:+71171967 Msa0222160:CDS
TCGGATACTCAACTTCTTCA+AGG 0.488143 2_1:-71176795 None:intergenic
TGGTGGGGAGACAGTTTCAA+TGG 0.489248 2_1:+71178728 Msa0222160:CDS
GCCGTTGCATATCTGAATGT+TGG 0.489341 2_1:+71176832 Msa0222160:CDS
GGGATCTTATATCATTCATC+GGG 0.492977 2_1:-71178270 None:intergenic
GAAGTCTGAGCAAGTAGAGA+AGG 0.494621 2_1:+71171926 Msa0222160:CDS
CAGTCATACTCTCTTGATGT+GGG 0.495048 2_1:+71178438 Msa0222160:CDS
GGTACACTTCCATTCGAAGA+TGG 0.495317 2_1:+71172859 Msa0222160:CDS
GTCAAATCTAAAACCACTGC+TGG 0.495553 2_1:+71178516 Msa0222160:CDS
AGCAAAGCTGACAACAGTAT+TGG 0.495828 2_1:+71172934 Msa0222160:CDS
CTAACCTGCCTTGATTCCAT+TGG 0.495999 2_1:-71178917 None:intergenic
CTTGTCGTTAAATATCTTCG+TGG 0.497386 2_1:-71178146 None:intergenic
AGAAAGCTTTGATTCTCTCT+AGG 0.499343 2_1:+71178368 Msa0222160:CDS
TGCATGGATTGTAACGGAAT+CGG 0.502489 2_1:-71170394 None:intergenic
ATTAGCACCTTCTAAGAGAA+AGG 0.503047 2_1:+71173287 Msa0222160:CDS
TAACAATGCTGGTCTTGGTG+GGG 0.504302 2_1:+71173257 Msa0222160:CDS
TTGCTGTGCCTTCATTCACA+TGG 0.504874 2_1:-71178825 None:intergenic
GTTTGTGGTACCTCTTCATC+CGG 0.506483 2_1:-71178688 None:intergenic
ACCAGCTGTATCCGATACAT+TGG 0.507922 2_1:-71171844 None:intergenic
AATAAAGAAGTCTCAAAGAA+TGG 0.509972 2_1:+71172997 Msa0222160:CDS
GTGATGTCCTTATTTCAATC+CGG 0.515336 2_1:+71175171 Msa0222160:CDS
GAAACTGTTTCTTCCAGCAG+TGG 0.515731 2_1:-71178529 None:intergenic
GCTTTGGCACCTTGGCTCGT+CGG 0.516761 2_1:-71172914 None:intergenic
TTTGCTGTGGCATCTTCCGA+TGG 0.516789 2_1:-71172709 None:intergenic
TGACGAGATCTGGCAAAACT+AGG 0.516814 2_1:+71172024 Msa0222160:CDS
CCTTCAGATTCTAAAAGTGC+AGG 0.517278 2_1:+71172065 Msa0222160:CDS
GCTTTCTCTTCAACAGTGAA+AGG 0.517856 2_1:-71178352 None:intergenic
AAGATTGATGAGTTGTCTAA+AGG 0.518469 2_1:+71172802 Msa0222160:CDS
CAAAGGAGAATTTGCAAGGT+AGG 0.519401 2_1:-71178641 None:intergenic
AAGATTGATGAGTTATCTAA+AGG 0.520908 2_1:+71172961 Msa0222160:CDS
CTTCGCCAAATCTTTGTCGC+AGG 0.522512 2_1:-71178072 None:intergenic
ACGTGGAAGTTGCACCGTCA+TGG 0.523243 2_1:-71178495 None:intergenic
AACAATGCTGGTCTTGGTGG+GGG 0.523275 2_1:+71173258 Msa0222160:CDS
AATCAAGTGTCAACTTCTGA+AGG 0.523667 2_1:-71178291 None:intergenic
GTGGTTCATCTCAGCGGAGC+CGG 0.527856 2_1:+71178761 Msa0222160:CDS
GCAATTGACATTTGAAGCCA+AGG 0.529890 2_1:+71172139 Msa0222160:CDS
AATGAAGAAGTCTCGAAGAA+TGG 0.531524 2_1:+71172838 Msa0222160:CDS
CCAGCTGTATCCGATACATT+GGG 0.532302 2_1:-71171843 None:intergenic
GCTCTTATCCTTCTGCTGCA+CGG 0.532672 2_1:-71174792 None:intergenic
GTACACTTCCATTCGAAGAT+GGG 0.532964 2_1:+71172860 Msa0222160:CDS
AGGGATCTTATATCATTCAT+CGG 0.533852 2_1:-71178271 None:intergenic
TTTGCTTTCCCATCTTCGAA+TGG 0.533992 2_1:-71172868 None:intergenic
TAAAAGGCTGAACTCTCCTC+CGG 0.534530 2_1:-71178780 None:intergenic
AAGATTGACGAGTTATCTAA+AGG 0.535496 2_1:+71172643 Msa0222160:CDS
AAATGACCGCCCTGATGTAT+CGG 0.537626 2_1:+71172216 Msa0222160:CDS
TCGCCAAAGATTGATAGTGT+TGG 0.541310 2_1:+71175140 Msa0222160:CDS
CACCCAACCTCAGTTGCACA+TGG 0.541372 2_1:-71174502 None:intergenic
AATCAAGGCAGGTTAGTGTC+TGG 0.541485 2_1:+71178924 Msa0222160:exon
TCAGTCATACTCTCTTGATG+TGG 0.541720 2_1:+71178437 Msa0222160:CDS
TCCAACATTCAGATATGCAA+CGG 0.542893 2_1:-71176833 None:intergenic
TCATCCTGTCTAGCTGATGT+TGG 0.545160 2_1:+71178559 Msa0222160:CDS
ACATTACGAACATTAGTGTC+AGG 0.548962 2_1:+71173201 Msa0222160:CDS
CAAGGAAGTGAATGAAAATG+AGG 0.550037 2_1:+71172157 Msa0222160:CDS
AAAGTTACCCAATGGAATCA+AGG 0.551364 2_1:+71178909 Msa0222160:CDS
CTTTAGTAGTAAAGGTTGCA+GGG 0.552129 2_1:-71176770 None:intergenic
TGTGCCTTCATTCACATGGT+CGG 0.552921 2_1:-71178821 None:intergenic
ACCACAGTTGACTCTAGGAT+TGG 0.555381 2_1:+71172736 Msa0222160:CDS
AAAAGCACATCCCAATGTAT+CGG 0.555771 2_1:+71171833 Msa0222160:CDS
GACAGACGAAGAACAATTCA+GGG 0.557426 2_1:-71170365 None:intergenic
TGAGGAAACCGTGCAGCAGA+AGG 0.559354 2_1:+71174784 Msa0222160:CDS
TGAGCAGGAATTTAGGTCGC+CGG 0.563570 2_1:+71178669 Msa0222160:CDS
CAAGTCGGACTCCTATAAGT+TGG 0.564538 2_1:+71175028 Msa0222160:CDS
GGTGTCCAGTTCCACTTGCG+TGG 0.568141 2_1:-71174817 None:intergenic
GAGTTAACTCTAGGTTGAGT+GGG 0.569102 2_1:+71173058 Msa0222160:CDS
CTCTTTACACAACCAAAGAA+AGG 0.572404 2_1:+71172242 Msa0222160:CDS
CTCGTCAAAGGACTTGGCGT+TGG 0.572857 2_1:-71172008 None:intergenic
AAGAGACCAGAGTTAACTCT+AGG 0.573035 2_1:+71173049 Msa0222160:CDS
AAGAGACCACAGTTGACTCT+AGG 0.576346 2_1:+71172731 Msa0222160:CDS
TCAACTGTCAATCTTCAAGT+CGG 0.577543 2_1:+71178410 Msa0222160:CDS
TATATTCGATGATGATGACT+TGG 0.578735 2_1:+71173230 Msa0222160:CDS
TTACGCGACTCCTCGGCTGT+AGG 0.579110 2_1:-71174478 None:intergenic
GGGACCGACCATGTGAATGA+AGG 0.579969 2_1:+71178817 Msa0222160:CDS
ACTAGTGTGGTGCCCAGAAG+AGG 0.581145 2_1:+71173153 Msa0222160:CDS
ATTTAGGTCGCCGGATGAAG+AGG 0.582509 2_1:+71178678 Msa0222160:CDS
TGCACATTAGATATCTGTAC+AGG 0.583301 2_1:-71175065 None:intergenic
TGTCCTTATTTCAATCCGGA+AGG 0.583393 2_1:+71175175 Msa0222160:CDS
TTACCCAATGGAATCAAGGC+AGG 0.584558 2_1:+71178913 Msa0222160:CDS
ACTCTAGGACCGACGAGCCA+AGG 0.584887 2_1:+71172905 Msa0222160:CDS
TTTGGAATAATCTGTTGGTG+GGG 0.584951 2_1:+71178713 Msa0222160:CDS
CCCAATGTATCGGATACAGC+TGG 0.586323 2_1:+71171843 Msa0222160:CDS
AAGAAACCAGAGTTGACTCT+AGG 0.587558 2_1:+71172890 Msa0222160:CDS
AACTGTCAATCTTCAAGTCG+GGG 0.588085 2_1:+71178412 Msa0222160:CDS
CAGCCTTCATCAAAATCTGT+AGG 0.595326 2_1:+71178883 Msa0222160:CDS
GATAAGAGCGACCACGCAAG+TGG 0.596892 2_1:+71174806 Msa0222160:CDS
AGAGTTAACTCTAGGTTGAG+TGG 0.600517 2_1:+71173057 Msa0222160:CDS
GACGAAGAACAATTCAGGGT+CGG 0.601333 2_1:-71170361 None:intergenic
GTTCATCTCAGCGGAGCCGG+AGG 0.603225 2_1:+71178764 Msa0222160:CDS
ACATGGGTTACGCGACTCCT+CGG 0.605052 2_1:-71174485 None:intergenic
AACCAGAAGAAAGTCTGTAA+GGG 0.606060 2_1:+71171968 Msa0222160:CDS
TCGTTCTAGTCAAAAGGCCA+AGG 0.606585 2_1:+71171758 Msa0222160:CDS
AAGTCTGAGCAAGTAGAGAA+GGG 0.606860 2_1:+71171927 Msa0222160:CDS
GTAGGTGAAAAGTTACCCAA+TGG 0.607636 2_1:+71178901 Msa0222160:CDS
GACTTGGTCAGTAACAATGC+TGG 0.607747 2_1:+71173246 Msa0222160:CDS
AGCAAAGGTGACAATAGTAG+TGG 0.610934 2_1:+71172775 Msa0222160:CDS
TGAAATAAGGACATCACGAA+TGG 0.611007 2_1:-71175165 None:intergenic
CTCTAGGCAAGGTAAGACCC+TGG 0.611413 2_1:+71178384 Msa0222160:CDS
ATGAAGAAAATAATAATGGG+AGG 0.613173 2_1:+71171781 Msa0222160:CDS
ACACAACGTGGAAAGTTCCC+AGG 0.615041 2_1:+71172181 Msa0222160:CDS
GATAAAAGGTGCCAAAGCAA+AGG 0.615375 2_1:+71172760 Msa0222160:CDS
AATGTTGGAATAAAAGCAAG+TGG 0.615384 2_1:+71176847 Msa0222160:CDS
GCTTTGATTCTCTCTAGGCA+AGG 0.617680 2_1:+71178373 Msa0222160:CDS
CAGGAAGGTGACAACAGTAG+TGG 0.619959 2_1:+71172616 Msa0222160:CDS
TGAAGAAAATAATAATGGGA+GGG 0.620771 2_1:+71171782 Msa0222160:CDS
TGAATCTGACAATCACTGCA+TGG 0.620839 2_1:-71170410 None:intergenic
AGATTGACAGTTGATGTCCA+GGG 0.621974 2_1:-71178401 None:intergenic
GCCAAAGATTGATAGTGTTG+GGG 0.622298 2_1:+71175142 Msa0222160:CDS
AATTCCTGCTCACCAAACAA+AGG 0.624272 2_1:-71178658 None:intergenic
GTCGGTCCTAGAGTCAACTC+TGG 0.624776 2_1:-71172896 None:intergenic
TCTCCTTTAGATAATGAGGA+AGG 0.625074 2_1:-71173339 None:intergenic
CAAACAAAGGAGAATTTGCA+AGG 0.628158 2_1:-71178645 None:intergenic
AGACTTCTGAGTACTTGAAG+AGG 0.628177 2_1:-71171910 None:intergenic
GAAGAACGGTACACTGCCAT+CGG 0.629096 2_1:+71172693 Msa0222160:CDS
AACAAAGAAGTATCGAAGAA+CGG 0.629825 2_1:+71172679 Msa0222160:CDS
AATCACTGCATGGATTGTAA+CGG 0.630967 2_1:-71170400 None:intergenic
TCAAAGTGTTGTTCATCCGA+AGG 0.632497 2_1:+71174974 Msa0222160:CDS
CACACTAGTCTCATAAGTTG+GGG 0.632819 2_1:-71173139 None:intergenic
TCAGGACATAGATGTCATTG+AGG 0.637473 2_1:+71174766 Msa0222160:intron
ATTAGCAAGCCAAATCAGGA+AGG 0.637512 2_1:+71172601 Msa0222160:CDS
TAATATTATCAGAATGCCCA+AGG 0.640296 2_1:-71172582 None:intergenic
AAAGAGAGACCGATACATCA+GGG 0.640898 2_1:-71172225 None:intergenic
ATCAAGTGTCAACTTCTGAA+GGG 0.640928 2_1:-71178290 None:intergenic
ACAGCCTGATTGCTGCGAAG+AGG 0.646179 2_1:+71173176 Msa0222160:CDS
GCGTAACCCATGTGCAACTG+AGG 0.653540 2_1:+71174495 Msa0222160:CDS
AGTCATACTCTCTTGATGTG+GGG 0.655516 2_1:+71178439 Msa0222160:CDS
TTATTGAAAGTCCAGCAACA+TGG 0.661716 2_1:+71178613 Msa0222160:CDS
TATTGCAAACAGATGCAAGT+CGG 0.667548 2_1:+71175013 Msa0222160:CDS
TTAGATGGTATAAATGAACC+AGG 0.668025 2_1:-71173114 None:intergenic
TGAAAATGAGGAACACAACG+TGG 0.669394 2_1:+71172169 Msa0222160:CDS
ACTCAACCTAGAGTTAACTC+TGG 0.670792 2_1:-71173055 None:intergenic
TTTCAATGGAAGTACTCATG+TGG 0.671125 2_1:+71178742 Msa0222160:CDS
ACCCAACCTCAGTTGCACAT+GGG 0.679197 2_1:-71174501 None:intergenic
TTGAAAGTCCAGCAACATGG+AGG 0.688038 2_1:+71178616 Msa0222160:CDS
TAAGAGAAAGGCAATCACAG+TGG 0.702136 2_1:+71173299 Msa0222160:CDS
ACTCATGTGGTTCATCTCAG+CGG 0.702729 2_1:+71178755 Msa0222160:CDS
GGGATTTCAGGGTAGCACTG+TGG 0.703298 2_1:+71174920 Msa0222160:intron
GCCAATCCTAGAGTCAACTG+TGG 0.706585 2_1:-71172737 None:intergenic
GCTCTCCCTTCAAAACTAGG+TGG 0.706794 2_1:+71173384 Msa0222160:CDS
CCCAACTTATGAGACTAGTG+TGG 0.722871 2_1:+71173140 Msa0222160:CDS
GAGAGACCGATACATCAGGG+CGG 0.804578 2_1:-71172222 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTTTATTTATTTTTATG+AGG + chr2_1:71173514-71173533 Msa0222160:intron 10.0%
!! AAAAAAAAAAAAAAATCAGA+CGG - chr2_1:71173576-71173595 None:intergenic 10.0%
!! CATATAAAAATGTAAATATA+TGG + chr2_1:71174328-71174347 Msa0222160:intron 10.0%
!!! TAACAAATTTTAAGTAAATT+GGG - chr2_1:71174569-71174588 None:intergenic 10.0%
!!! TATTTTGATTTTAAAATTTG+GGG + chr2_1:71176421-71176440 Msa0222160:intron 10.0%
!!! TTGTTTTATTTTTTGAAAAT+CGG - chr2_1:71177767-71177786 None:intergenic 10.0%
!!! TTTTTTTTTTTTAATTGTCA+TGG + chr2_1:71177850-71177869 Msa0222160:intron 10.0%
!!! AATTGCAGATATTATTTTTT+AGG + chr2_1:71170721-71170740 Msa0222160:intron 15.0%
!!! ATTGCAGATATTATTTTTTA+GGG + chr2_1:71170722-71170741 Msa0222160:intron 15.0%
!! ACACATTATATTAAAATTCA+AGG - chr2_1:71170961-71170980 None:intergenic 15.0%
!!! AAATTTTTTATTTAAGCCAA+TGG + chr2_1:71171725-71171744 Msa0222160:exon 15.0%
!!! TTATTTATTTTTATGAGGTT+TGG + chr2_1:71173519-71173538 Msa0222160:intron 15.0%
!! CTATTTAATATTCAAATTCA+TGG + chr2_1:71173648-71173667 Msa0222160:intron 15.0%
!! TGAGTAAAAAATAATCAAAA+AGG - chr2_1:71173750-71173769 None:intergenic 15.0%
!! AATCAAATATAGTATTAACA+AGG - chr2_1:71173877-71173896 None:intergenic 15.0%
!!! AACAAATTTTAAGTAAATTG+GGG - chr2_1:71174568-71174587 None:intergenic 15.0%
!!! GTAACAAATTTTAAGTAAAT+TGG - chr2_1:71174570-71174589 None:intergenic 15.0%
!!! TACTTAAAATTTGTTACAAA+AGG + chr2_1:71174573-71174592 Msa0222160:intron 15.0%
!!! ACTTAAAATTTGTTACAAAA+GGG + chr2_1:71174574-71174593 Msa0222160:intron 15.0%
!!! AGAAATACTGATTTTTTTTT+TGG - chr2_1:71176464-71176483 None:intergenic 15.0%
!!! TTTCTCATTTTAATTTTTGA+TGG + chr2_1:71176479-71176498 Msa0222160:intron 15.0%
!!! TTCTCATTTTAATTTTTGAT+GGG + chr2_1:71176480-71176499 Msa0222160:intron 15.0%
!! AAAAATGTTAAATCAAAACA+TGG - chr2_1:71176525-71176544 None:intergenic 15.0%
!! AGTTGAGAAAAAATAAATTA+AGG + chr2_1:71176902-71176921 Msa0222160:CDS 15.0%
!! GTTGAGAAAAAATAAATTAA+GGG + chr2_1:71176903-71176922 Msa0222160:CDS 15.0%
!!! AAATAGTTTTTTTTAAGTTG+TGG + chr2_1:71177653-71177672 Msa0222160:intron 15.0%
!!! TGTTATTTTCATTGAGAAAA+GGG - chr2_1:71170315-71170334 None:intergenic 20.0%
!! AATGTATGTAGAAAAATTGA+CGG - chr2_1:71170593-71170612 None:intergenic 20.0%
!!! ATTATGTAAAATTGAGTTGA+AGG + chr2_1:71171060-71171079 Msa0222160:intron 20.0%
!!! AATCAGAAGCTATAATTTTT+AGG + chr2_1:71171135-71171154 Msa0222160:intron 20.0%
!! GGTTCAAATAAAATCAATTA+TGG + chr2_1:71171156-71171175 Msa0222160:intron 20.0%
!! TCAAATAAAATCAATTATGG+AGG + chr2_1:71171159-71171178 Msa0222160:intron 20.0%
!!! AGAATTGATTTTAACATGTT+TGG - chr2_1:71171212-71171231 None:intergenic 20.0%
!! CAAATAATAAATTCTAGGTT+TGG - chr2_1:71171274-71171293 None:intergenic 20.0%
!! AACAGCAAATAATAAATTCT+AGG - chr2_1:71171279-71171298 None:intergenic 20.0%
!!! GGTAAAAGAAGATTTTAATT+TGG - chr2_1:71171462-71171481 None:intergenic 20.0%
!!! ATTATTATTTTCTTCATCCT+TGG - chr2_1:71171778-71171797 None:intergenic 20.0%
!! AAGGATGAAGAAAATAATAA+TGG + chr2_1:71171777-71171796 Msa0222160:CDS 20.0%
!! AGGATGAAGAAAATAATAAT+GGG + chr2_1:71171778-71171797 Msa0222160:CDS 20.0%
!! ATTTGTATTACATTTGGATT+TGG - chr2_1:71172344-71172363 None:intergenic 20.0%
!! CATATCAAATTTATTAGAAG+TGG + chr2_1:71172475-71172494 Msa0222160:intron 20.0%
!! AAAATCAAGCAATCAAAAAA+TGG - chr2_1:71172555-71172574 None:intergenic 20.0%
!!! GAATTCATTGTTCAATTTTT+TGG + chr2_1:71173482-71173501 Msa0222160:intron 20.0%
!! AAATAATCAAAAAGGACAAA+AGG - chr2_1:71173742-71173761 None:intergenic 20.0%
!!! TACAAAAATGTTTTTCAAGT+TGG + chr2_1:71174236-71174255 Msa0222160:intron 20.0%
!!! TTTTTCAAGTTGGATAATTT+TGG + chr2_1:71174246-71174265 Msa0222160:intron 20.0%
!!! ACAAATTTTAAGTAAATTGG+GGG - chr2_1:71174567-71174586 None:intergenic 20.0%
!!! TGTTGCTAATTTTGATTTAA+GGG - chr2_1:71174676-71174695 None:intergenic 20.0%
!!! ATGTTGCTAATTTTGATTTA+AGG - chr2_1:71174677-71174696 None:intergenic 20.0%
!!! ATTTCTTTGTATCTTTTCAT+TGG + chr2_1:71174741-71174760 Msa0222160:intron 20.0%
!! ATTTGGTTAGTACAATATAT+TGG + chr2_1:71175290-71175309 Msa0222160:intron 20.0%
!! TCCTTTATTATTAGATTAGA+TGG + chr2_1:71175320-71175339 Msa0222160:intron 20.0%
!! ACCATCTAATCTAATAATAA+AGG - chr2_1:71175324-71175343 None:intergenic 20.0%
!!! ATTCCTCTAAAAAATATACA+GGG - chr2_1:71175876-71175895 None:intergenic 20.0%
!!! AATTCCTCTAAAAAATATAC+AGG - chr2_1:71175877-71175896 None:intergenic 20.0%
!!! TATTTTGGTATAGAGATTAT+GGG - chr2_1:71176290-71176309 None:intergenic 20.0%
!!! ATATTTTGGTATAGAGATTA+TGG - chr2_1:71176291-71176310 None:intergenic 20.0%
!!! TGATTTTTTTTTTGGCAAAA+CGG - chr2_1:71176456-71176475 None:intergenic 20.0%
!!! ATGTGTTTTAATTAGTTGTT+TGG + chr2_1:71176560-71176579 Msa0222160:intron 20.0%
!! ACAAATCAAAGATAATAGAT+GGG - chr2_1:71177733-71177752 None:intergenic 20.0%
!! AACAAATCAAAGATAATAGA+TGG - chr2_1:71177734-71177753 None:intergenic 20.0%
!!! AAGAATTGATAATTGTCTTA+CGG + chr2_1:71178105-71178124 Msa0222160:CDS 20.0%
!!! GTGTTATTTTCATTGAGAAA+AGG - chr2_1:71170316-71170335 None:intergenic 25.0%
!!! ATTTCTTCTATCACTGATTT+AGG + chr2_1:71170513-71170532 Msa0222160:intron 25.0%
!!! TTTCTTCTATCACTGATTTA+GGG + chr2_1:71170514-71170533 Msa0222160:intron 25.0%
! TAGCAATCACATAAACAAAA+CGG - chr2_1:71170618-71170637 None:intergenic 25.0%
!!! GTTAAATATGTTTTTAGTGC+CGG + chr2_1:71170744-71170763 Msa0222160:intron 25.0%
! ACGAAATTATAGATATTCAC+CGG - chr2_1:71170766-71170785 None:intergenic 25.0%
! TCAGTGAGAAAATTTAGTTA+TGG + chr2_1:71171029-71171048 Msa0222160:intron 25.0%
! CAGTGAGAAAATTTAGTTAT+GGG + chr2_1:71171030-71171049 Msa0222160:intron 25.0%
! TTTGAAGGATTCATGTAATT+AGG + chr2_1:71171307-71171326 Msa0222160:intron 25.0%
! ATGGAGATTGATATATTCTT+TGG + chr2_1:71171347-71171366 Msa0222160:intron 25.0%
!! TATTTTCTCAAGTTACTCAA+GGG - chr2_1:71171429-71171448 None:intergenic 25.0%
!! ATATTTTCTCAAGTTACTCA+AGG - chr2_1:71171430-71171449 None:intergenic 25.0%
! AGTAACTTGAGAAAATATTG+AGG + chr2_1:71171432-71171451 Msa0222160:intron 25.0%
!! TTAAAATCTTCTTTTACCAG+TGG + chr2_1:71171464-71171483 Msa0222160:intron 25.0%
! ATAATAACAATATTTGCCAC+TGG - chr2_1:71171483-71171502 None:intergenic 25.0%
!! ATGAAGAAAATAATAATGGG+AGG + chr2_1:71171781-71171800 Msa0222160:CDS 25.0%
!! TGAAGAAAATAATAATGGGA+GGG + chr2_1:71171782-71171801 Msa0222160:CDS 25.0%
! ACAACGATTTGTATTACATT+TGG - chr2_1:71172350-71172369 None:intergenic 25.0%
!! ACAAATCGTTGTTAATTTGA+TGG + chr2_1:71172358-71172377 Msa0222160:intron 25.0%
! TTTAGATAACTCATCAATCT+TGG - chr2_1:71172962-71172981 None:intergenic 25.0%
! AAGATTGATGAGTTATCTAA+AGG + chr2_1:71172961-71172980 Msa0222160:CDS 25.0%
! AATAAAGAAGTCTCAAAGAA+TGG + chr2_1:71172997-71173016 Msa0222160:CDS 25.0%
!!! ATAAGGTACTTGTTGTTAAA+TGG + chr2_1:71173429-71173448 Msa0222160:intron 25.0%
!! TTTTACTCAACATGTTTGTT+TGG + chr2_1:71173761-71173780 Msa0222160:intron 25.0%
! TTGAGAAAGAGAAAAAAAAG+AGG + chr2_1:71173903-71173922 Msa0222160:intron 25.0%
! ACATAGGTAATTTAAACGAA+TGG + chr2_1:71173932-71173951 Msa0222160:intron 25.0%
! AAACTCTAATCCTTACTTAT+AGG + chr2_1:71174022-71174041 Msa0222160:intron 25.0%
! AACTCTAATCCTTACTTATA+GGG + chr2_1:71174023-71174042 Msa0222160:intron 25.0%
!! CTTGATTTCCTTGTTTATTT+AGG - chr2_1:71174064-71174083 None:intergenic 25.0%
! CCTTGAAAAGTTACAAAAAT+TGG - chr2_1:71174282-71174301 None:intergenic 25.0%
!! CCAATTTTTGTAACTTTTCA+AGG + chr2_1:71174279-71174298 Msa0222160:intron 25.0%
!!! AAATTTTAAGTAAATTGGGG+GGG - chr2_1:71174565-71174584 None:intergenic 25.0%
!!! CAAATTTTAAGTAAATTGGG+GGG - chr2_1:71174566-71174585 None:intergenic 25.0%
!!! CATTTATTTCTGTTCATTTG+TGG + chr2_1:71174708-71174727 Msa0222160:intron 25.0%
! ATCAAAAGAAACAAACCTTA+AGG - chr2_1:71174841-71174860 None:intergenic 25.0%
!!! GTTTGTTTCTTTTGATGTAT+AGG + chr2_1:71174845-71174864 Msa0222160:intron 25.0%
!! TTTCTTTTGATGTATAGGTT+TGG + chr2_1:71174850-71174869 Msa0222160:intron 25.0%
! AAATCCCAGTAGAATTAAAT+AGG - chr2_1:71174907-71174926 None:intergenic 25.0%
! TATATTGTACTAACCAAATG+CGG - chr2_1:71175289-71175308 None:intergenic 25.0%
! AAGTTGGATAAAGTCTATTT+AGG - chr2_1:71175510-71175529 None:intergenic 25.0%
! ACGTTGAGTTTAGATAAAAT+CGG + chr2_1:71175570-71175589 Msa0222160:intron 25.0%
! ACAAATAAAATCTCACTACT+AGG - chr2_1:71175689-71175708 None:intergenic 25.0%
! AGTTTGATTAAGGATGATTT+CGG - chr2_1:71176197-71176216 None:intergenic 25.0%
!!! GATTTTTCAGAGTTTGATTA+AGG - chr2_1:71176207-71176226 None:intergenic 25.0%
! TATATAAAGATATCACACTC+AGG - chr2_1:71176318-71176337 None:intergenic 25.0%
! GAGTGTGATATCTTTATATA+TGG + chr2_1:71176318-71176337 Msa0222160:intron 25.0%
!!! ATTTTTTTTTTGGCAAAACG+GGG - chr2_1:71176454-71176473 None:intergenic 25.0%
!!! GATTTTTTTTTTGGCAAAAC+GGG - chr2_1:71176455-71176474 None:intergenic 25.0%
! CTAAAAAGTAGAGAAATACT+CGG - chr2_1:71176614-71176633 None:intergenic 25.0%
!!! CTACTTTTTAGTAGTTGATA+TGG + chr2_1:71176623-71176642 Msa0222160:intron 25.0%
! AGGGATTCTTCAATAATATA+GGG - chr2_1:71176754-71176773 None:intergenic 25.0%
!! TATTTCCATATATTGACTAC+AGG + chr2_1:71176962-71176981 Msa0222160:intron 25.0%
!! AAAACACAATAGTGTTTTTC+AGG - chr2_1:71177017-71177036 None:intergenic 25.0%
!! CTATTGTGTTTTTCTATTAC+CGG + chr2_1:71177025-71177044 Msa0222160:intron 25.0%
!! TATTGTGTTTTTCTATTACC+GGG + chr2_1:71177026-71177045 Msa0222160:intron 25.0%
! ATGATTAGATGTCAATGATT+TGG + chr2_1:71177240-71177259 Msa0222160:intron 25.0%
!!! AGTTTTTTTTAAGTTGTGGA+AGG + chr2_1:71177657-71177676 Msa0222160:intron 25.0%
!!! GTTTTTTTTAAGTTGTGGAA+GGG + chr2_1:71177658-71177677 Msa0222160:intron 25.0%
!! TTGTTTCTCAAGAAAATCAA+GGG - chr2_1:71177696-71177715 None:intergenic 25.0%
!! TTTGTTTCTCAAGAAAATCA+AGG - chr2_1:71177697-71177716 None:intergenic 25.0%
! CAAATCAAAGATAATAGATG+GGG - chr2_1:71177732-71177751 None:intergenic 25.0%
!!! TATTTTTTGAAAATCGGCAT+GGG - chr2_1:71177761-71177780 None:intergenic 25.0%
!!! TTATTTTTTGAAAATCGGCA+TGG - chr2_1:71177762-71177781 None:intergenic 25.0%
! ACAATGAGAAAATTAGAAAG+TGG - chr2_1:71177876-71177895 None:intergenic 25.0%
!! TTCTAATTTTCTCATTGTAC+TGG + chr2_1:71177878-71177897 Msa0222160:intron 25.0%
!! GACTTCAATAGTAGATATTT+TGG + chr2_1:71178042-71178061 Msa0222160:CDS 25.0%
!!! ATTGATGACAATTTTATGCT+AGG - chr2_1:71178217-71178236 None:intergenic 25.0%
! TTATTATATTTGACAGTGAC+TGG + chr2_1:71178245-71178264 Msa0222160:CDS 25.0%
!! AGTTCAGCCTTTTAATAATT+TGG + chr2_1:71178789-71178808 Msa0222160:CDS 25.0%
ATTTCGAAGCAAAACGAATA+CGG - chr2_1:71170546-71170565 None:intergenic 30.0%
! TAATTTGCACGACTAAAAAG+TGG - chr2_1:71170804-71170823 None:intergenic 30.0%
! GTTTTTACTTTATGCATGCT+TGG + chr2_1:71171002-71171021 Msa0222160:intron 30.0%
!!! TACACCTCTAGAATCAATTT+TGG + chr2_1:71171231-71171250 Msa0222160:intron 30.0%
AAGGATTCATGTAATTAGGT+TGG + chr2_1:71171311-71171330 Msa0222160:intron 30.0%
!!! GGTTGGAGTTTTTTTTGTTA+TGG + chr2_1:71171328-71171347 Msa0222160:intron 30.0%
! ATTTTCTCAAGTTACTCAAG+GGG - chr2_1:71171428-71171447 None:intergenic 30.0%
! ACTAGGAATCATTCTTTTTC+TGG + chr2_1:71172041-71172060 Msa0222160:CDS 30.0%
! CATTTTCTTTCTTTTCACCT+GGG - chr2_1:71172201-71172220 None:intergenic 30.0%
! TCATTTTCTTTCTTTTCACC+TGG - chr2_1:71172202-71172221 None:intergenic 30.0%
!!! TGGACATTTTTTTTCGAGTA+AGG + chr2_1:71172495-71172514 Msa0222160:intron 30.0%
TAATATTATCAGAATGCCCA+AGG - chr2_1:71172585-71172604 None:intergenic 30.0%
TAATATTAGCAAGCCAAATC+AGG + chr2_1:71172597-71172616 Msa0222160:CDS 30.0%
TTTAGATAACTCGTCAATCT+TGG - chr2_1:71172644-71172663 None:intergenic 30.0%
AAGATTGACGAGTTATCTAA+AGG + chr2_1:71172643-71172662 Msa0222160:CDS 30.0%
!! AACAAAGAAGTATCGAAGAA+CGG + chr2_1:71172679-71172698 Msa0222160:CDS 30.0%
TTTAGACAACTCATCAATCT+TGG - chr2_1:71172803-71172822 None:intergenic 30.0%
AAGATTGATGAGTTGTCTAA+AGG + chr2_1:71172802-71172821 Msa0222160:CDS 30.0%
! TTTTCTGCTAAATCTGTCAT+AGG - chr2_1:71173084-71173103 None:intergenic 30.0%
TTAGATGGTATAAATGAACC+AGG - chr2_1:71173117-71173136 None:intergenic 30.0%
! TATATTCGATGATGATGACT+TGG + chr2_1:71173230-71173249 Msa0222160:CDS 30.0%
TGTTGTTAAATGGCAGTAAA+TGG + chr2_1:71173439-71173458 Msa0222160:intron 30.0%
TAATCAAAAAGGACAAAAGG+TGG - chr2_1:71173739-71173758 None:intergenic 30.0%
! AAAAAAGAGGAAGCATACAT+AGG + chr2_1:71173916-71173935 Msa0222160:intron 30.0%
! TTGATAATAGCATGATACGA+AGG + chr2_1:71173996-71174015 Msa0222160:intron 30.0%
TCTATCTATCCCTATAAGTA+AGG - chr2_1:71174035-71174054 None:intergenic 30.0%
CACACATATTATAATGAACC+AGG + chr2_1:71174177-71174196 Msa0222160:intron 30.0%
ATATAGTAAATGAGTAGCTC+TGG - chr2_1:71174305-71174324 None:intergenic 30.0%
TGAACAGATCAACAGATAAA+GGG - chr2_1:71174386-71174405 None:intergenic 30.0%
ATGAACAGATCAACAGATAA+AGG - chr2_1:71174387-71174406 None:intergenic 30.0%
TTATCTGTTGATCTGTTCAT+TGG + chr2_1:71174387-71174406 Msa0222160:intron 30.0%
!! AATTTTAAGTAAATTGGGGG+GGG - chr2_1:71174564-71174583 None:intergenic 30.0%
!! ACAAAACACATTTGAGTTGA+GGG - chr2_1:71174882-71174901 None:intergenic 30.0%
!! AACAAAACACATTTGAGTTG+AGG - chr2_1:71174883-71174902 None:intergenic 30.0%
TGTTGCCTATTTAATTCTAC+TGG + chr2_1:71174899-71174918 Msa0222160:intron 30.0%
GTTGCCTATTTAATTCTACT+GGG + chr2_1:71174900-71174919 Msa0222160:intron 30.0%
TTTAATTCTACTGGGATTTC+AGG + chr2_1:71174908-71174927 Msa0222160:intron 30.0%
TTAATTCTACTGGGATTTCA+GGG + chr2_1:71174909-71174928 Msa0222160:intron 30.0%
AATATTCATGCTCTTCTTGA+TGG + chr2_1:71174951-71174970 Msa0222160:CDS 30.0%
!! CTATAAGTTGGTTGAGTATT+GGG + chr2_1:71175040-71175059 Msa0222160:CDS 30.0%
!!! TTCGCTCTAGTTTTTAGTTA+GGG - chr2_1:71175841-71175860 None:intergenic 30.0%
!!! ATTCGCTCTAGTTTTTAGTT+AGG - chr2_1:71175842-71175861 None:intergenic 30.0%
ACTAAAAACTAGAGCGAATT+TGG + chr2_1:71175843-71175862 Msa0222160:intron 30.0%
!!! CAACCCTGTATATTTTTTAG+AGG + chr2_1:71175870-71175889 Msa0222160:intron 30.0%
ATCTACAACGAATGAAAATC+AGG + chr2_1:71175979-71175998 Msa0222160:intron 30.0%
AAAAAACAGCACTACTTACT+TGG + chr2_1:71176152-71176171 Msa0222160:intron 30.0%
TCAAAATATACGGTAAGCAA+TGG - chr2_1:71176409-71176428 None:intergenic 30.0%
GGAGTTAATTGAAAGAGTAA+AGG - chr2_1:71176653-71176672 None:intergenic 30.0%
CAGGGATTCTTCAATAATAT+AGG - chr2_1:71176755-71176774 None:intergenic 30.0%
AATGTTGGAATAAAAGCAAG+TGG + chr2_1:71176847-71176866 Msa0222160:CDS 30.0%
AGATACCTGTAGTCAATATA+TGG - chr2_1:71176970-71176989 None:intergenic 30.0%
TCATAGAACCATAAAATCGA+AGG - chr2_1:71177099-71177118 None:intergenic 30.0%
!! TTCGATTTTATGGTTCTATG+AGG + chr2_1:71177098-71177117 Msa0222160:intron 30.0%
! TGATCTAAGATAGAGCATTA+TGG + chr2_1:71177272-71177291 Msa0222160:intron 30.0%
! AAGACTCTTTAAGAGTAATC+AGG + chr2_1:71177482-71177501 Msa0222160:intron 30.0%
!! TTTCGATTCTCTTTGTTGTT+TGG + chr2_1:71177517-71177536 Msa0222160:intron 30.0%
!! TAACTGTTTTGAGTAGAGAA+GGG + chr2_1:71177557-71177576 Msa0222160:intron 30.0%
AAACTATTTCCACTTCTTGA+TGG - chr2_1:71177642-71177661 None:intergenic 30.0%
ACACAACATAAAAGAAAGCA+GGG - chr2_1:71177940-71177959 None:intergenic 30.0%
TTTCTTATAACTCAATGACC+TGG - chr2_1:71177984-71178003 None:intergenic 30.0%
TTATTGAATTTGCAGCCAAT+TGG + chr2_1:71178007-71178026 Msa0222160:intron 30.0%
! CAAGCGATTTTTCTTTTTGA+TGG + chr2_1:71178174-71178193 Msa0222160:CDS 30.0%
! ATGACAATTTTATGCTAGGA+TGG - chr2_1:71178213-71178232 None:intergenic 30.0%
AGGGATCTTATATCATTCAT+CGG - chr2_1:71178274-71178293 None:intergenic 30.0%
CAGTGAAAGGTGAATATAAA+CGG - chr2_1:71178342-71178361 None:intergenic 30.0%
AGATTATTCCAAAACGTTTG+TGG - chr2_1:71178706-71178725 None:intergenic 30.0%
!!! AACGTTTTGGAATAATCTGT+TGG + chr2_1:71178708-71178727 Msa0222160:CDS 30.0%
!!! TTTTGGAATAATCTGTTGGT+GGG + chr2_1:71178712-71178731 Msa0222160:CDS 30.0%
! CTTTTAATAATTTGGCAGGT+GGG + chr2_1:71178797-71178816 Msa0222160:CDS 30.0%
! AATCACTGCATGGATTGTAA+CGG - chr2_1:71170403-71170422 None:intergenic 35.0%
!!! GTAGTTTTAGTCTCTTCCTA+CGG + chr2_1:71170832-71170851 Msa0222160:intron 35.0%
!!! ACACGTGGTTTTGTAATTTG+CGG + chr2_1:71170866-71170885 Msa0222160:intron 35.0%
! AGAGCCAAAATTGATTCTAG+AGG - chr2_1:71171238-71171257 None:intergenic 35.0%
!!! AATTTTGGCTCTTCCAAAAG+TGG + chr2_1:71171246-71171265 Msa0222160:intron 35.0%
!! TGCTGTTGATTTGTGTTTGA+AGG + chr2_1:71171292-71171311 Msa0222160:intron 35.0%
AGTACACATTCCTTTGTAGT+TGG + chr2_1:71171579-71171598 Msa0222160:intron 35.0%
! TTCCTTTGTAGTTGGTACTA+TGG + chr2_1:71171587-71171606 Msa0222160:intron 35.0%
GATATCTGCGTATTGTATGT+TGG + chr2_1:71171649-71171668 Msa0222160:intron 35.0%
!! GAACGAGTACTTTTTACCAT+TGG - chr2_1:71171744-71171763 None:intergenic 35.0%
AAGTACTCGTTCTAGTCAAA+AGG + chr2_1:71171752-71171771 Msa0222160:CDS 35.0%
! AAAAGCACATCCCAATGTAT+CGG + chr2_1:71171833-71171852 Msa0222160:CDS 35.0%
GAGGTTGCAATTATCTTTGA+TGG - chr2_1:71171894-71171913 None:intergenic 35.0%
AAACCAGAAGAAAGTCTGTA+AGG + chr2_1:71171967-71171986 Msa0222160:CDS 35.0%
AACCAGAAGAAAGTCTGTAA+GGG + chr2_1:71171968-71171987 Msa0222160:CDS 35.0%
! CTCATTTTCATTCACTTCCT+TGG - chr2_1:71172159-71172178 None:intergenic 35.0%
CAAGGAAGTGAATGAAAATG+AGG + chr2_1:71172157-71172176 Msa0222160:CDS 35.0%
CTCTTTACACAACCAAAGAA+AGG + chr2_1:71172242-71172261 Msa0222160:CDS 35.0%
!! ACAACCAAAGAAAGGTACTT+TGG + chr2_1:71172250-71172269 Msa0222160:intron 35.0%
! AACACCAAAGTACCTTTCTT+TGG - chr2_1:71172257-71172276 None:intergenic 35.0%
! CTTGATTTTCAGATTGCCTT+GGG + chr2_1:71172566-71172585 Msa0222160:intron 35.0%
TACTATTGTCACCTTTGCTT+TGG - chr2_1:71172774-71172793 None:intergenic 35.0%
AATGAAGAAGTCTCGAAGAA+TGG + chr2_1:71172838-71172857 Msa0222160:CDS 35.0%
ACATTACGAACATTAGTGTC+AGG + chr2_1:71173201-71173220 Msa0222160:CDS 35.0%
! ATTAGCACCTTCTAAGAGAA+AGG + chr2_1:71173287-71173306 Msa0222160:CDS 35.0%
GTTCCTTCCTCATTATCTAA+AGG + chr2_1:71173336-71173355 Msa0222160:CDS 35.0%
TCTCCTTTAGATAATGAGGA+AGG - chr2_1:71173342-71173361 None:intergenic 35.0%
TCTGTCTCCTTTAGATAATG+AGG - chr2_1:71173346-71173365 None:intergenic 35.0%
AGTCATGTTCCAAACGAATA+AGG + chr2_1:71173412-71173431 Msa0222160:CDS 35.0%
CAACAAGTACCTTATTCGTT+TGG - chr2_1:71173424-71173443 None:intergenic 35.0%
AATCAGACGGTTTGATATAG+AGG - chr2_1:71173563-71173582 None:intergenic 35.0%
ACTCAACATGTTTGTTTGGA+TGG + chr2_1:71173765-71173784 Msa0222160:intron 35.0%
AGCTCGCAAGAATAAACAAT+AGG - chr2_1:71173797-71173816 None:intergenic 35.0%
CTTATAGGGATAGATAGACT+TGG + chr2_1:71174037-71174056 Msa0222160:intron 35.0%
! GACTTGGTCCTAAATAAACA+AGG + chr2_1:71174053-71174072 Msa0222160:intron 35.0%
! TCCTTAAAGTTGACTCAGTA+TGG + chr2_1:71174131-71174150 Msa0222160:intron 35.0%
ACCATACTGAGTCAACTTTA+AGG - chr2_1:71174135-71174154 None:intergenic 35.0%
! AAAGTTGACTCAGTATGGTT+AGG + chr2_1:71174136-71174155 Msa0222160:intron 35.0%
! TATGGGCGAAATATTTTGCT+AGG + chr2_1:71174346-71174365 Msa0222160:intron 35.0%
! TGATTGGTTCTTTACTTTGC+AGG + chr2_1:71174443-71174462 Msa0222160:intron 35.0%
!! ATTTTAAGTAAATTGGGGGG+GGG - chr2_1:71174563-71174582 None:intergenic 35.0%
ATGCACTAATGATAGATTGC+TGG + chr2_1:71174603-71174622 Msa0222160:intron 35.0%
ATAATTAATCAACAGCCCTC+TGG + chr2_1:71174629-71174648 Msa0222160:intron 35.0%
!!! TGTATCTTTTCATTGGCTTC+AGG + chr2_1:71174748-71174767 Msa0222160:intron 35.0%
TATTGCAAACAGATGCAAGT+CGG + chr2_1:71175013-71175032 Msa0222160:CDS 35.0%
CCAATACTCAACCAACTTAT+AGG - chr2_1:71175042-71175061 None:intergenic 35.0%
!! CCTATAAGTTGGTTGAGTAT+TGG + chr2_1:71175039-71175058 Msa0222160:CDS 35.0%
TGCACATTAGATATCTGTAC+AGG - chr2_1:71175068-71175087 None:intergenic 35.0%
TGAAATAAGGACATCACGAA+TGG - chr2_1:71175168-71175187 None:intergenic 35.0%
! GTGATGTCCTTATTTCAATC+CGG + chr2_1:71175171-71175190 Msa0222160:CDS 35.0%
TAACCTTCCGGATTGAAATA+AGG - chr2_1:71175181-71175200 None:intergenic 35.0%
! AAAAGTGCAAACTAACCTTC+CGG - chr2_1:71175193-71175212 None:intergenic 35.0%
TGACATGCACGATTCATTAT+TGG + chr2_1:71175455-71175474 Msa0222160:intron 35.0%
TCTATTTAGGTCATACCACT+AGG - chr2_1:71175497-71175516 None:intergenic 35.0%
ATCAGTGATCGAAATAGGTT+TGG + chr2_1:71175740-71175759 Msa0222160:intron 35.0%
GAAATAGGTTTGGATTCATG+TGG + chr2_1:71175750-71175769 Msa0222160:intron 35.0%
ATCTTGCTCCGAAGTTAATT+TGG + chr2_1:71175812-71175831 Msa0222160:intron 35.0%
TAGGGAGACCAAATTAACTT+CGG - chr2_1:71175823-71175842 None:intergenic 35.0%
ACAACGAATGAAAATCAGGA+AGG + chr2_1:71175983-71176002 Msa0222160:intron 35.0%
!!! TCTCTCTCTCTCTTGTTTTT+GGG + chr2_1:71176072-71176091 Msa0222160:intron 35.0%
TTAACGCATGAAACAGATCT+GGG - chr2_1:71176105-71176124 None:intergenic 35.0%
TTTAACGCATGAAACAGATC+TGG - chr2_1:71176106-71176125 None:intergenic 35.0%
TGATTAAGGATGATTTCGGT+AGG - chr2_1:71176193-71176212 None:intergenic 35.0%
GAGATTATGGGAATGGTTAT+GGG - chr2_1:71176278-71176297 None:intergenic 35.0%
AGAGATTATGGGAATGGTTA+TGG - chr2_1:71176279-71176298 None:intergenic 35.0%
TGGTATAGAGATTATGGGAA+TGG - chr2_1:71176285-71176304 None:intergenic 35.0%
TGATGGGAGAGAGAAAAAAA+AGG + chr2_1:71176496-71176515 Msa0222160:intron 35.0%
GTTTGGAAGAGTTAAGTCTT+AGG + chr2_1:71176577-71176596 Msa0222160:intron 35.0%
AAAGTAGAGAAATACTCGGA+TGG - chr2_1:71176610-71176629 None:intergenic 35.0%
! GTGGCTATGAATTTTCGTAA+CGG + chr2_1:71176684-71176703 Msa0222160:intron 35.0%
TTCGTAACGGTTTCATTTAC+TGG + chr2_1:71176697-71176716 Msa0222160:intron 35.0%
CTTTAGTAGTAAAGGTTGCA+GGG - chr2_1:71176773-71176792 None:intergenic 35.0%
CTGCAACCTTTACTACTAAA+GGG + chr2_1:71176772-71176791 Msa0222160:CDS 35.0%
!! ACGGCTTTTTCTTTTTGACT+CGG - chr2_1:71176817-71176836 None:intergenic 35.0%
TCCAACATTCAGATATGCAA+CGG - chr2_1:71176836-71176855 None:intergenic 35.0%
GTCAGCAACTTTATGAAGTA+TGG - chr2_1:71176995-71177014 None:intergenic 35.0%
! GTAACTCACCTTCGATTTTA+TGG + chr2_1:71177088-71177107 Msa0222160:intron 35.0%
!! GATTTTATGGTTCTATGAGG+CGG + chr2_1:71177101-71177120 Msa0222160:intron 35.0%
ACAAATCCGTCCTTAACAAA+AGG - chr2_1:71177326-71177345 None:intergenic 35.0%
! CTTTAAGAGTAATCAGGTCA+TGG + chr2_1:71177488-71177507 Msa0222160:intron 35.0%
!! CTAACTGTTTTGAGTAGAGA+AGG + chr2_1:71177556-71177575 Msa0222160:intron 35.0%
!! AACTGTTTTGAGTAGAGAAG+GGG + chr2_1:71177558-71177577 Msa0222160:intron 35.0%
TTAGCAAATCAAATGCACAG+AGG + chr2_1:71177817-71177836 Msa0222160:intron 35.0%
CACACAACATAAAAGAAAGC+AGG - chr2_1:71177941-71177960 None:intergenic 35.0%
! TATGCACTTTGAGAAAAACC+AGG + chr2_1:71177963-71177982 Msa0222160:intron 35.0%
CTTGTCGTTAAATATCTTCG+TGG - chr2_1:71178149-71178168 None:intergenic 35.0%
GGGATCTTATATCATTCATC+GGG - chr2_1:71178273-71178292 None:intergenic 35.0%
ATCAAGTGTCAACTTCTGAA+GGG - chr2_1:71178293-71178312 None:intergenic 35.0%
AATCAAGTGTCAACTTCTGA+AGG - chr2_1:71178294-71178313 None:intergenic 35.0%
! AGAAAGCTTTGATTCTCTCT+AGG + chr2_1:71178368-71178387 Msa0222160:CDS 35.0%
TCAACTGTCAATCTTCAAGT+CGG + chr2_1:71178410-71178429 Msa0222160:CDS 35.0%
TTATTGAAAGTCCAGCAACA+TGG + chr2_1:71178613-71178632 Msa0222160:CDS 35.0%
CAAACAAAGGAGAATTTGCA+AGG - chr2_1:71178648-71178667 None:intergenic 35.0%
CTTGCAAATTCTCCTTTGTT+TGG + chr2_1:71178646-71178665 Msa0222160:CDS 35.0%
!!! GTTTTGGAATAATCTGTTGG+TGG + chr2_1:71178711-71178730 Msa0222160:CDS 35.0%
! TTTGGAATAATCTGTTGGTG+GGG + chr2_1:71178713-71178732 Msa0222160:CDS 35.0%
!! TTTCAATGGAAGTACTCATG+TGG + chr2_1:71178742-71178761 Msa0222160:CDS 35.0%
! CAGCCTTTTAATAATTTGGC+AGG + chr2_1:71178793-71178812 Msa0222160:CDS 35.0%
CCACCTGCCAAATTATTAAA+AGG - chr2_1:71178799-71178818 None:intergenic 35.0%
! CCTTTTAATAATTTGGCAGG+TGG + chr2_1:71178796-71178815 Msa0222160:CDS 35.0%
!! TCACCTACAGATTTTGATGA+AGG - chr2_1:71178889-71178908 None:intergenic 35.0%
AAAGTTACCCAATGGAATCA+AGG + chr2_1:71178909-71178928 Msa0222160:CDS 35.0%
TGGTATCAGAGGGTTACTTA+TGG - chr2_1:71170338-71170357 None:intergenic 40.0%
GACAGACGAAGAACAATTCA+GGG - chr2_1:71170368-71170387 None:intergenic 40.0%
TGACAGACGAAGAACAATTC+AGG - chr2_1:71170369-71170388 None:intergenic 40.0%
! TGCATGGATTGTAACGGAAT+CGG - chr2_1:71170397-71170416 None:intergenic 40.0%
TGAATCTGACAATCACTGCA+TGG - chr2_1:71170413-71170432 None:intergenic 40.0%
ATGCAGTGATTGTCAGATTC+AGG + chr2_1:71170412-71170431 Msa0222160:five_prime_UTR 40.0%
ACGCTTTCTCTCTCTCTATA+AGG + chr2_1:71170476-71170495 Msa0222160:intron 40.0%
! TTTTAGTCTCTTCCTACGGA+GGG + chr2_1:71170836-71170855 Msa0222160:intron 40.0%
!!! CACGTGGTTTTGTAATTTGC+GGG + chr2_1:71170867-71170886 Msa0222160:intron 40.0%
GGGACTATAGAGTAGATTCA+GGG + chr2_1:71170887-71170906 Msa0222160:intron 40.0%
!! TCTAGGTTTGGTTCCACTTT+TGG - chr2_1:71171262-71171281 None:intergenic 40.0%
CACCATAGTACCAACTACAA+AGG - chr2_1:71171592-71171611 None:intergenic 40.0%
! TTTTTGCTTTCTCGCTGCTT+CGG - chr2_1:71171812-71171831 None:intergenic 40.0%
AGACTTCTGAGTACTTGAAG+AGG - chr2_1:71171913-71171932 None:intergenic 40.0%
AAGTCTGAGCAAGTAGAGAA+GGG + chr2_1:71171927-71171946 Msa0222160:CDS 40.0%
!! ACAGACTTTCTTCTGGTTTC+AGG - chr2_1:71171966-71171985 None:intergenic 40.0%
!!! CCTGCACTTTTAGAATCTGA+AGG - chr2_1:71172068-71172087 None:intergenic 40.0%
! CCTTCAGATTCTAAAAGTGC+AGG + chr2_1:71172065-71172084 Msa0222160:CDS 40.0%
! TCTAAAAGTGCAGGTTCTCT+TGG + chr2_1:71172074-71172093 Msa0222160:CDS 40.0%
! GCAATTGACATTTGAAGCCA+AGG + chr2_1:71172139-71172158 Msa0222160:CDS 40.0%
TGAAAATGAGGAACACAACG+TGG + chr2_1:71172169-71172188 Msa0222160:CDS 40.0%
AAAGAGAGACCGATACATCA+GGG - chr2_1:71172228-71172247 None:intergenic 40.0%
TAAAGAGAGACCGATACATC+AGG - chr2_1:71172229-71172248 None:intergenic 40.0%
TAGTTAAATGAAGCTAGCGC+AGG + chr2_1:71172415-71172434 Msa0222160:intron 40.0%
AGTTAAATGAAGCTAGCGCA+GGG + chr2_1:71172416-71172435 Msa0222160:intron 40.0%
! GCTTGATTTTCAGATTGCCT+TGG + chr2_1:71172565-71172584 Msa0222160:intron 40.0%
ATTAGCAAGCCAAATCAGGA+AGG + chr2_1:71172601-71172620 Msa0222160:CDS 40.0%
!! ACTCTAGGATTGGCGATAAA+AGG + chr2_1:71172746-71172765 Msa0222160:CDS 40.0%
!! GATAAAAGGTGCCAAAGCAA+AGG + chr2_1:71172760-71172779 Msa0222160:CDS 40.0%
AGCAAAGGTGACAATAGTAG+TGG + chr2_1:71172775-71172794 Msa0222160:CDS 40.0%
GTACACTTCCATTCGAAGAT+GGG + chr2_1:71172860-71172879 Msa0222160:CDS 40.0%
TTTGCTTTCCCATCTTCGAA+TGG - chr2_1:71172871-71172890 None:intergenic 40.0%
! AAGAAACCAGAGTTGACTCT+AGG + chr2_1:71172890-71172909 Msa0222160:CDS 40.0%
TACTGTTGTCAGCTTTGCTT+TGG - chr2_1:71172933-71172952 None:intergenic 40.0%
AGCAAAGCTGACAACAGTAT+TGG + chr2_1:71172934-71172953 Msa0222160:CDS 40.0%
! AACTCTGGTCTCTTTTGCTT+TGG - chr2_1:71173043-71173062 None:intergenic 40.0%
AAGAGACCAGAGTTAACTCT+AGG + chr2_1:71173049-71173068 Msa0222160:CDS 40.0%
ACTCAACCTAGAGTTAACTC+TGG - chr2_1:71173058-71173077 None:intergenic 40.0%
! AGAGTTAACTCTAGGTTGAG+TGG + chr2_1:71173057-71173076 Msa0222160:CDS 40.0%
! GAGTTAACTCTAGGTTGAGT+GGG + chr2_1:71173058-71173077 Msa0222160:CDS 40.0%
! TCATAAGTTGGGGTGTTAGA+TGG - chr2_1:71173132-71173151 None:intergenic 40.0%
! CACACTAGTCTCATAAGTTG+GGG - chr2_1:71173142-71173161 None:intergenic 40.0%
! CCACACTAGTCTCATAAGTT+GGG - chr2_1:71173143-71173162 None:intergenic 40.0%
! ACCACACTAGTCTCATAAGT+TGG - chr2_1:71173144-71173163 None:intergenic 40.0%
GTGATTGCCTTTCTCTTAGA+AGG - chr2_1:71173297-71173316 None:intergenic 40.0%
TAAGAGAAAGGCAATCACAG+TGG + chr2_1:71173299-71173318 Msa0222160:CDS 40.0%
GACGGTTTGATATAGAGGAA+GGG - chr2_1:71173558-71173577 None:intergenic 40.0%
AGACGGTTTGATATAGAGGA+AGG - chr2_1:71173559-71173578 None:intergenic 40.0%
CATGTTTGTTTGGATGGTGT+CGG + chr2_1:71173771-71173790 Msa0222160:intron 40.0%
! TCTGTAAGTCTTCTTTTGCC+TGG - chr2_1:71174198-71174217 None:intergenic 40.0%
CATTGGCACTTTGACGTATT+AGG + chr2_1:71174404-71174423 Msa0222160:intron 40.0%
! TTGACGTATTAGGCGTTTTC+AGG + chr2_1:71174414-71174433 Msa0222160:intron 40.0%
!!! CGTTTTCAGGTCTAAGTGAT+TGG + chr2_1:71174427-71174446 Msa0222160:intron 40.0%
TGGTTCTTTACTTTGCAGGT+TGG + chr2_1:71174447-71174466 Msa0222160:intron 40.0%
!! TTTTAAGTAAATTGGGGGGG+GGG - chr2_1:71174562-71174581 None:intergenic 40.0%
TCAGGACATAGATGTCATTG+AGG + chr2_1:71174766-71174785 Msa0222160:intron 40.0%
!! CACATTTGAGTTGAGGGATA+AGG - chr2_1:71174876-71174895 None:intergenic 40.0%
!! TCAAAGTGTTGTTCATCCGA+AGG + chr2_1:71174974-71174993 Msa0222160:CDS 40.0%
TCACTTGACACTTTCTCCTT+CGG - chr2_1:71174993-71175012 None:intergenic 40.0%
!! TCGCCAAAGATTGATAGTGT+TGG + chr2_1:71175140-71175159 Msa0222160:CDS 40.0%
!! CGCCAAAGATTGATAGTGTT+GGG + chr2_1:71175141-71175160 Msa0222160:CDS 40.0%
!! GCCAAAGATTGATAGTGTTG+GGG + chr2_1:71175142-71175161 Msa0222160:CDS 40.0%
! TGTCCTTATTTCAATCCGGA+AGG + chr2_1:71175175-71175194 Msa0222160:CDS 40.0%
ATTGTACTAACCAAATGCGG+CGG - chr2_1:71175286-71175305 None:intergenic 40.0%
AAACGTCCTATTTCACCTAG+TGG + chr2_1:71175479-71175498 Msa0222160:intron 40.0%
GTCATACCACTAGGTGAAAT+AGG - chr2_1:71175488-71175507 None:intergenic 40.0%
AAGGTGAGGATTGTCAAAGT+TGG - chr2_1:71175526-71175545 None:intergenic 40.0%
!! ACCTTGCAAGCAAGTTTTGT+AGG + chr2_1:71175541-71175560 Msa0222160:intron 40.0%
!! CCTTGCAAGCAAGTTTTGTA+GGG + chr2_1:71175542-71175561 Msa0222160:intron 40.0%
! TTTGGGTGGCAATCTAGAAT+AGG - chr2_1:71175598-71175617 None:intergenic 40.0%
TTATGCCTGATCAATTTGGG+TGG - chr2_1:71175612-71175631 None:intergenic 40.0%
ACCCAAATTGATCAGGCATA+AGG + chr2_1:71175611-71175630 Msa0222160:intron 40.0%
GCCTTATGCCTGATCAATTT+GGG - chr2_1:71175615-71175634 None:intergenic 40.0%
TGCCTTATGCCTGATCAATT+TGG - chr2_1:71175616-71175635 None:intergenic 40.0%
CATCGATCAGTGATCGAAAT+AGG + chr2_1:71175735-71175754 Msa0222160:intron 40.0%
!!! CTCTCTCTCTCTCTTGTTTT+TGG + chr2_1:71176071-71176090 Msa0222160:intron 40.0%
!!! CTCTCTCTCTCTTGTTTTTG+GGG + chr2_1:71176073-71176092 Msa0222160:intron 40.0%
!!! TCTCTCTCTCTTGTTTTTGG+GGG + chr2_1:71176074-71176093 Msa0222160:intron 40.0%
! CACACTCAGGCACAATATTT+TGG - chr2_1:71176305-71176324 None:intergenic 40.0%
CAATAGAACAATGCTCGTGT+GGG - chr2_1:71176370-71176389 None:intergenic 40.0%
CCTTTAGTAGTAAAGGTTGC+AGG - chr2_1:71176774-71176793 None:intergenic 40.0%
CCTGCAACCTTTACTACTAA+AGG + chr2_1:71176771-71176790 Msa0222160:CDS 40.0%
TCAAGGCCCTTTAGTAGTAA+AGG - chr2_1:71176781-71176800 None:intergenic 40.0%
TCGGATACTCAACTTCTTCA+AGG - chr2_1:71176798-71176817 None:intergenic 40.0%
!!! AAGGGCACTCATACTTTTTC+AGG + chr2_1:71176921-71176940 Msa0222160:CDS 40.0%
ATCCGTCCTTAACAAAAGGT+GGG - chr2_1:71177322-71177341 None:intergenic 40.0%
AATCCGTCCTTAACAAAAGG+TGG - chr2_1:71177323-71177342 None:intergenic 40.0%
AGAGTAAGAGAATTCGAGAG+AGG + chr2_1:71177389-71177408 Msa0222160:intron 40.0%
AAATCAAATGCACAGAGGCA+TGG + chr2_1:71177822-71177841 Msa0222160:intron 40.0%
! TTGTACTGGTGTATGTGTGT+TGG + chr2_1:71177892-71177911 Msa0222160:intron 40.0%
!! ATGTGTGTTGGTTACTGCTT+AGG + chr2_1:71177904-71177923 Msa0222160:intron 40.0%
!! TGTGTGTTGGTTACTGCTTA+GGG + chr2_1:71177905-71177924 Msa0222160:intron 40.0%
GTCTTTCCAGAAACTCCAAT+TGG - chr2_1:71178025-71178044 None:intergenic 40.0%
! CAATTTTATGCTAGGATGGC+AGG - chr2_1:71178209-71178228 None:intergenic 40.0%
GCTTTCTCTTCAACAGTGAA+AGG - chr2_1:71178355-71178374 None:intergenic 40.0%
! AGATTGACAGTTGATGTCCA+GGG - chr2_1:71178404-71178423 None:intergenic 40.0%
! AAGATTGACAGTTGATGTCC+AGG - chr2_1:71178405-71178424 None:intergenic 40.0%
CAACTGTCAATCTTCAAGTC+GGG + chr2_1:71178411-71178430 Msa0222160:CDS 40.0%
AACTGTCAATCTTCAAGTCG+GGG + chr2_1:71178412-71178431 Msa0222160:CDS 40.0%
TCAGTCATACTCTCTTGATG+TGG + chr2_1:71178437-71178456 Msa0222160:CDS 40.0%
CAGTCATACTCTCTTGATGT+GGG + chr2_1:71178438-71178457 Msa0222160:CDS 40.0%
AGTCATACTCTCTTGATGTG+GGG + chr2_1:71178439-71178458 Msa0222160:CDS 40.0%
! GAGTTGAGAGTTTTCCATGA+CGG + chr2_1:71178481-71178500 Msa0222160:CDS 40.0%
!!! CAGTGGTTTTAGATTTGACG+TGG - chr2_1:71178515-71178534 None:intergenic 40.0%
! GTCAAATCTAAAACCACTGC+TGG + chr2_1:71178516-71178535 Msa0222160:CDS 40.0%
CAAAGGAGAATTTGCAAGGT+AGG - chr2_1:71178644-71178663 None:intergenic 40.0%
AATTCCTGCTCACCAAACAA+AGG - chr2_1:71178661-71178680 None:intergenic 40.0%
! TGTTTGGTGAGCAGGAATTT+AGG + chr2_1:71178662-71178681 Msa0222160:CDS 40.0%
!!! AAGAGGTACCACAAACGTTT+TGG + chr2_1:71178695-71178714 Msa0222160:CDS 40.0%
CAGCCTTCATCAAAATCTGT+AGG + chr2_1:71178883-71178902 Msa0222160:CDS 40.0%
GTAGGTGAAAAGTTACCCAA+TGG + chr2_1:71178901-71178920 Msa0222160:CDS 40.0%
TAACCTGCCTTGATTCCATT+GGG - chr2_1:71178919-71178938 None:intergenic 40.0%
!! GAACAATTCAGGGTCGGTTT+TGG - chr2_1:71170358-71170377 None:intergenic 45.0%
GACGAAGAACAATTCAGGGT+CGG - chr2_1:71170364-71170383 None:intergenic 45.0%
!! GTTTTAGTCTCTTCCTACGG+AGG + chr2_1:71170835-71170854 Msa0222160:intron 45.0%
CGGGACTATAGAGTAGATTC+AGG + chr2_1:71170886-71170905 Msa0222160:intron 45.0%
TTCTCAAGTTACTCAAGGGG+AGG - chr2_1:71171425-71171444 None:intergenic 45.0%
TCGTTCTAGTCAAAAGGCCA+AGG + chr2_1:71171758-71171777 Msa0222160:CDS 45.0%
! TTTTGCTTTCTCGCTGCTTC+GGG - chr2_1:71171811-71171830 None:intergenic 45.0%
CCAGCTGTATCCGATACATT+GGG - chr2_1:71171846-71171865 None:intergenic 45.0%
ACCAGCTGTATCCGATACAT+TGG - chr2_1:71171847-71171866 None:intergenic 45.0%
GAAGTCTGAGCAAGTAGAGA+AGG + chr2_1:71171926-71171945 Msa0222160:CDS 45.0%
!! TTTCTTCTGGTTTCAGGAGC+TGG - chr2_1:71171960-71171979 None:intergenic 45.0%
GACCCTTACAGACTTTCTTC+TGG - chr2_1:71171973-71171992 None:intergenic 45.0%
! GTTTTGCCAGATCTCGTCAA+AGG - chr2_1:71172023-71172042 None:intergenic 45.0%
TGACGAGATCTGGCAAAACT+AGG + chr2_1:71172024-71172043 Msa0222160:CDS 45.0%
AAATGACCGCCCTGATGTAT+CGG + chr2_1:71172216-71172235 Msa0222160:CDS 45.0%
GCCAACTTTCTTGTTCACTC+AGG + chr2_1:71172299-71172318 Msa0222160:intron 45.0%
GCCTGAGTGAACAAGAAAGT+TGG - chr2_1:71172303-71172322 None:intergenic 45.0%
GTTAAATGAAGCTAGCGCAG+GGG + chr2_1:71172417-71172436 Msa0222160:intron 45.0%
! GTTTCTCCTAATCGCTGGTT+GGG + chr2_1:71172439-71172458 Msa0222160:intron 45.0%
AAACAACCCAACCAGCGATT+AGG - chr2_1:71172448-71172467 None:intergenic 45.0%
CTGTTGTCACCTTCCTGATT+TGG - chr2_1:71172613-71172632 None:intergenic 45.0%
! AACTGTGGTCTCTTTTGCTG+TGG - chr2_1:71172725-71172744 None:intergenic 45.0%
! AAGAGACCACAGTTGACTCT+AGG + chr2_1:71172731-71172750 Msa0222160:CDS 45.0%
!! ACCACAGTTGACTCTAGGAT+TGG + chr2_1:71172736-71172755 Msa0222160:CDS 45.0%
GGTACACTTCCATTCGAAGA+TGG + chr2_1:71172859-71172878 Msa0222160:CDS 45.0%
CCCAACTTATGAGACTAGTG+TGG + chr2_1:71173140-71173159 Msa0222160:CDS 45.0%
! GACTTGGTCAGTAACAATGC+TGG + chr2_1:71173246-71173265 Msa0222160:CDS 45.0%
! GTCAGTAACAATGCTGGTCT+TGG + chr2_1:71173252-71173271 Msa0222160:CDS 45.0%
!! AGTAACAATGCTGGTCTTGG+TGG + chr2_1:71173255-71173274 Msa0222160:CDS 45.0%
!! GTAACAATGCTGGTCTTGGT+GGG + chr2_1:71173256-71173275 Msa0222160:CDS 45.0%
!! TAACAATGCTGGTCTTGGTG+GGG + chr2_1:71173257-71173276 Msa0222160:CDS 45.0%
!!! GTTTTGAAGGGAGAGCATCA+GGG - chr2_1:71173380-71173399 None:intergenic 45.0%
!!! AGTTTTGAAGGGAGAGCATC+AGG - chr2_1:71173381-71173400 None:intergenic 45.0%
GATGCTCTCCCTTCAAAACT+AGG + chr2_1:71173381-71173400 Msa0222160:CDS 45.0%
!!! CGTTGCCACCTAGTTTTGAA+GGG - chr2_1:71173392-71173411 None:intergenic 45.0%
!!! TCGTTGCCACCTAGTTTTGA+AGG - chr2_1:71173393-71173412 None:intergenic 45.0%
GAGTTGCAGATGTGTGCAAA+AGG - chr2_1:71173839-71173858 None:intergenic 45.0%
!! GGATTTTAATCCTACAGCCG+AGG + chr2_1:71174468-71174487 Msa0222160:CDS 45.0%
TTTAAGTAAATTGGGGGGGG+GGG - chr2_1:71174561-71174580 None:intergenic 45.0%
AGGGAACAGATTCTATGCCT+GGG - chr2_1:71174657-71174676 None:intergenic 45.0%
AAGGGAACAGATTCTATGCC+TGG - chr2_1:71174658-71174677 None:intergenic 45.0%
AAGTGGAACTGGACACCTTA+AGG + chr2_1:71174823-71174842 Msa0222160:CDS 45.0%
CAAGTCGGACTCCTATAAGT+TGG + chr2_1:71175028-71175047 Msa0222160:CDS 45.0%
GCCCCAACACTATCAATCTT+TGG - chr2_1:71175146-71175165 None:intergenic 45.0%
! CAAAACTTGCTTGCAAGGTG+AGG - chr2_1:71175540-71175559 None:intergenic 45.0%
! CCCTACAAAACTTGCTTGCA+AGG - chr2_1:71175545-71175564 None:intergenic 45.0%
GATTGCCACCCAAATTGATC+AGG + chr2_1:71175604-71175623 Msa0222160:intron 45.0%
CTACGGCTTCACATGCAAAT+GGG + chr2_1:71176250-71176269 Msa0222160:intron 45.0%
GCAATAGAACAATGCTCGTG+TGG - chr2_1:71176371-71176390 None:intergenic 45.0%
TTAACTCCACAGCTGTGAAG+TGG + chr2_1:71176665-71176684 Msa0222160:intron 45.0%
GCCGTTGCATATCTGAATGT+TGG + chr2_1:71176832-71176851 Msa0222160:CDS 45.0%
TTACCAAGTCGCATCCTACT+GGG - chr2_1:71177072-71177091 None:intergenic 45.0%
CACATTGTAGTCACACTCAG+AGG + chr2_1:71177167-71177186 Msa0222160:intron 45.0%
! GTTGACCCCACCTTTTGTTA+AGG + chr2_1:71177313-71177332 Msa0222160:intron 45.0%
! ACCCCACCTTTTGTTAAGGA+CGG + chr2_1:71177317-71177336 Msa0222160:intron 45.0%
TCCGTCCTTAACAAAAGGTG+GGG - chr2_1:71177321-71177340 None:intergenic 45.0%
TTTGAGTAGAGAAGGGGAAG+AGG + chr2_1:71177564-71177583 Msa0222160:intron 45.0%
TTGAGTAGAGAAGGGGAAGA+GGG + chr2_1:71177565-71177584 Msa0222160:intron 45.0%
GAGAAAGGTTGAGCCATTGA+TGG + chr2_1:71177591-71177610 Msa0222160:intron 45.0%
TTGAGCCATTGATGGAGAGA+AGG + chr2_1:71177599-71177618 Msa0222160:intron 45.0%
AGTCTCCTTCTCTCCATCAA+TGG - chr2_1:71177607-71177626 None:intergenic 45.0%
GGATGAATGCCATCAAGAAG+TGG + chr2_1:71177630-71177649 Msa0222160:intron 45.0%
TTGCAGCCAATTGGAGTTTC+TGG + chr2_1:71178016-71178035 Msa0222160:intron 45.0%
GACTTCCTGCGACAAAGATT+TGG + chr2_1:71178067-71178086 Msa0222160:CDS 45.0%
GCTTTGATTCTCTCTAGGCA+AGG + chr2_1:71178373-71178392 Msa0222160:CDS 45.0%
! GAAACTGTTTCTTCCAGCAG+TGG - chr2_1:71178532-71178551 None:intergenic 45.0%
TCATCCTGTCTAGCTGATGT+TGG + chr2_1:71178559-71178578 Msa0222160:CDS 45.0%
TTCACCAACATCAGCTAGAC+AGG - chr2_1:71178566-71178585 None:intergenic 45.0%
TTGAAAGTCCAGCAACATGG+AGG + chr2_1:71178616-71178635 Msa0222160:CDS 45.0%
! TTCTCCTTTGTTTGGTGAGC+AGG + chr2_1:71178654-71178673 Msa0222160:CDS 45.0%
GTTTGTGGTACCTCTTCATC+CGG - chr2_1:71178691-71178710 None:intergenic 45.0%
ACTCATGTGGTTCATCTCAG+CGG + chr2_1:71178755-71178774 Msa0222160:CDS 45.0%
TAAAAGGCTGAACTCTCCTC+CGG - chr2_1:71178783-71178802 None:intergenic 45.0%
TGTGCCTTCATTCACATGGT+CGG - chr2_1:71178824-71178843 None:intergenic 45.0%
TTGCTGTGCCTTCATTCACA+TGG - chr2_1:71178828-71178847 None:intergenic 45.0%
TTACCCAATGGAATCAAGGC+AGG + chr2_1:71178913-71178932 Msa0222160:CDS 45.0%
CTAACCTGCCTTGATTCCAT+TGG - chr2_1:71178920-71178939 None:intergenic 45.0%
AATCAAGGCAGGTTAGTGTC+TGG + chr2_1:71178924-71178943 Msa0222160:exon 45.0%
!! ATATAAAAATGTAAATATAT+GGG + chr2_1:71174329-71174348 Msa0222160:intron 5.0%
!! AAATTATTAAAAAATATGAA+AGG - chr2_1:71175404-71175423 None:intergenic 5.0%
!!! AATTTTAAAATCAAAATATA+CGG - chr2_1:71176419-71176438 None:intergenic 5.0%
!!! TATATTTTGATTTTAAAATT+TGG + chr2_1:71176419-71176438 Msa0222160:intron 5.0%
!!! ATATTTTGATTTTAAAATTT+GGG + chr2_1:71176420-71176439 Msa0222160:intron 5.0%
!! GGGTCGGTTTTGGTATCAGA+GGG - chr2_1:71170348-71170367 None:intergenic 50.0%
!! AGGGTCGGTTTTGGTATCAG+AGG - chr2_1:71170349-71170368 None:intergenic 50.0%
!!! CGTGTTTTTAGTCCCTCCGT+AGG - chr2_1:71170851-71170870 None:intergenic 50.0%
ACGGAGGGACTAAAAACACG+TGG + chr2_1:71170851-71170870 Msa0222160:intron 50.0%
CCCAATGTATCGGATACAGC+TGG + chr2_1:71171843-71171862 Msa0222160:CDS 50.0%
CCAGATCTCGTCAAAGGACT+TGG - chr2_1:71172017-71172036 None:intergenic 50.0%
CCAAGTCCTTTGACGAGATC+TGG + chr2_1:71172014-71172033 Msa0222160:CDS 50.0%
ACACAACGTGGAAAGTTCCC+AGG + chr2_1:71172181-71172200 Msa0222160:CDS 50.0%
GGTTTCTCCTAATCGCTGGT+TGG + chr2_1:71172438-71172457 Msa0222160:intron 50.0%
CAGGAAGGTGACAACAGTAG+TGG + chr2_1:71172616-71172635 Msa0222160:CDS 50.0%
GAAGAACGGTACACTGCCAT+CGG + chr2_1:71172693-71172712 Msa0222160:CDS 50.0%
! TTTGCTGTGGCATCTTCCGA+TGG - chr2_1:71172712-71172731 None:intergenic 50.0%
GCCAATCCTAGAGTCAACTG+TGG - chr2_1:71172740-71172759 None:intergenic 50.0%
TCAGCTTTGCTTTGGCACCT+TGG - chr2_1:71172925-71172944 None:intergenic 50.0%
GCAGAAAATTGTGCGACTCC+TGG + chr2_1:71173096-71173115 Msa0222160:CDS 50.0%
CAATCAGGCTGTCCTCTTCT+GGG - chr2_1:71173168-71173187 None:intergenic 50.0%
!! AACAATGCTGGTCTTGGTGG+GGG + chr2_1:71173258-71173277 Msa0222160:CDS 50.0%
GCTCTCCCTTCAAAACTAGG+TGG + chr2_1:71173384-71173403 Msa0222160:CDS 50.0%
AACCCATGTGCAACTGAGGT+TGG + chr2_1:71174499-71174518 Msa0222160:intron 50.0%
ACCCATGTGCAACTGAGGTT+GGG + chr2_1:71174500-71174519 Msa0222160:intron 50.0%
ACCCAACCTCAGTTGCACAT+GGG - chr2_1:71174504-71174523 None:intergenic 50.0%
TTAAGTAAATTGGGGGGGGG+GGG - chr2_1:71174560-71174579 None:intergenic 50.0%
GCTCTTATCCTTCTGCTGCA+CGG - chr2_1:71174795-71174814 None:intergenic 50.0%
CTGTTTCATTCCGCCGCATT+TGG + chr2_1:71175273-71175292 Msa0222160:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr2_1:71176010-71176029 None:intergenic 50.0%
CACTTCATGCCCATCAGCTA+CGG + chr2_1:71176233-71176252 Msa0222160:intron 50.0%
CATGTGAAGCCGTAGCTGAT+GGG - chr2_1:71176245-71176264 None:intergenic 50.0%
GCTACGGCTTCACATGCAAA+TGG + chr2_1:71176249-71176268 Msa0222160:intron 50.0%
TCATAGCCACTTCACAGCTG+TGG - chr2_1:71176674-71176693 None:intergenic 50.0%
GTTACCAAGTCGCATCCTAC+TGG - chr2_1:71177073-71177092 None:intergenic 50.0%
ACCAGGATCACAAGTCGTGT+GGG - chr2_1:71177137-71177156 None:intergenic 50.0%
CAATGTGCTCATGCAAGACC+AGG - chr2_1:71177154-71177173 None:intergenic 50.0%
ACTCAGAGGCAGCAACATTG+TGG + chr2_1:71177181-71177200 Msa0222160:intron 50.0%
AAAAGGTGGGGTCAACTGCA+TGG - chr2_1:71177309-71177328 None:intergenic 50.0%
GATGGAGAGAAGGAGACTTG+AGG + chr2_1:71177609-71177628 Msa0222160:intron 50.0%
CTTCGCCAAATCTTTGTCGC+AGG - chr2_1:71178075-71178094 None:intergenic 50.0%
TGAGCAGGAATTTAGGTCGC+CGG + chr2_1:71178669-71178688 Msa0222160:CDS 50.0%
ATTTAGGTCGCCGGATGAAG+AGG + chr2_1:71178678-71178697 Msa0222160:CDS 50.0%
TGGTGGGGAGACAGTTTCAA+TGG + chr2_1:71178728-71178747 Msa0222160:CDS 50.0%
CTCGTCAAAGGACTTGGCGT+TGG - chr2_1:71172011-71172030 None:intergenic 55.0%
GAGAGACCGATACATCAGGG+CGG - chr2_1:71172225-71172244 None:intergenic 55.0%
CAGGGGTTTCTCCTAATCGC+TGG + chr2_1:71172434-71172453 Msa0222160:intron 55.0%
GTCGGTCCTAGAGTCAACTC+TGG - chr2_1:71172899-71172918 None:intergenic 55.0%
ACTAGTGTGGTGCCCAGAAG+AGG + chr2_1:71173153-71173172 Msa0222160:CDS 55.0%
GCAATCAGGCTGTCCTCTTC+TGG - chr2_1:71173169-71173188 None:intergenic 55.0%
ACAGCCTGATTGCTGCGAAG+AGG + chr2_1:71173176-71173195 Msa0222160:CDS 55.0%
GTCTCCTCTTCGCAGCAATC+AGG - chr2_1:71173183-71173202 None:intergenic 55.0%
! ACATGGGTTACGCGACTCCT+CGG - chr2_1:71174488-71174507 None:intergenic 55.0%
GCGTAACCCATGTGCAACTG+AGG + chr2_1:71174495-71174514 Msa0222160:CDS 55.0%
CACCCAACCTCAGTTGCACA+TGG - chr2_1:71174505-71174524 None:intergenic 55.0%
TAAGTAAATTGGGGGGGGGG+GGG - chr2_1:71174559-71174578 None:intergenic 55.0%
TTCTATGCCTGGGCACCAGA+GGG - chr2_1:71174647-71174666 None:intergenic 55.0%
ATTCTATGCCTGGGCACCAG+AGG - chr2_1:71174648-71174667 None:intergenic 55.0%
TGAGGAAACCGTGCAGCAGA+AGG + chr2_1:71174784-71174803 Msa0222160:CDS 55.0%
GATAAGAGCGACCACGCAAG+TGG + chr2_1:71174806-71174825 Msa0222160:CDS 55.0%
GGGATTTCAGGGTAGCACTG+TGG + chr2_1:71174920-71174939 Msa0222160:intron 55.0%
AGGCATAAGACCCCTGAGTG+AGG + chr2_1:71175631-71175650 Msa0222160:intron 55.0%
CATAAGACCCCTGAGTGAGG+TGG + chr2_1:71175634-71175653 Msa0222160:intron 55.0%
TCGAGTACCACCTCACTCAG+GGG - chr2_1:71175644-71175663 None:intergenic 55.0%
CTCGAGTACCACCTCACTCA+GGG - chr2_1:71175645-71175664 None:intergenic 55.0%
TCTCGAGTACCACCTCACTC+AGG - chr2_1:71175646-71175665 None:intergenic 55.0%
GCATGTGAAGCCGTAGCTGA+TGG - chr2_1:71176246-71176265 None:intergenic 55.0%
! GGCTGAAGAGTGTGTTGCGT+AGG - chr2_1:71176349-71176368 None:intergenic 55.0%
GATCACAAGTCGTGTGGGCA+CGG - chr2_1:71177132-71177151 None:intergenic 55.0%
GACCAGGATCACAAGTCGTG+TGG - chr2_1:71177138-71177157 None:intergenic 55.0%
GTAGAGAAGGGGAAGAGGGA+TGG + chr2_1:71177569-71177588 Msa0222160:intron 55.0%
AGGGGAAGAGGGATGGAGAA+AGG + chr2_1:71177576-71177595 Msa0222160:intron 55.0%
! CTTCGTGGCAGCTTGCTTCT+TGG - chr2_1:71178134-71178153 None:intergenic 55.0%
CTCTAGGCAAGGTAAGACCC+TGG + chr2_1:71178384-71178403 Msa0222160:CDS 55.0%
ACGTGGAAGTTGCACCGTCA+TGG - chr2_1:71178498-71178517 None:intergenic 55.0%
GGGACCGACCATGTGAATGA+AGG + chr2_1:71178817-71178836 Msa0222160:CDS 55.0%
!! ACTCTAGGACCGACGAGCCA+AGG + chr2_1:71172905-71172924 Msa0222160:CDS 60.0%
! GCTTTGGCACCTTGGCTCGT+CGG - chr2_1:71172917-71172936 None:intergenic 60.0%
TGTGTGTGAGCGCACGCATG+AGG - chr2_1:71174163-71174182 None:intergenic 60.0%
TTACGCGACTCCTCGGCTGT+AGG - chr2_1:71174481-71174500 None:intergenic 60.0%
AAGTAAATTGGGGGGGGGGG+GGG - chr2_1:71174558-71174577 None:intergenic 60.0%
AGCGACCACGCAAGTGGAAC+TGG + chr2_1:71174812-71174831 Msa0222160:CDS 60.0%
GGTGTCCAGTTCCACTTGCG+TGG - chr2_1:71174820-71174839 None:intergenic 60.0%
CGTGGGTCAAGTACGTGACC+CGG - chr2_1:71177047-71177066 None:intergenic 60.0%
ACTTGACCCACGTGCCCAGT+AGG + chr2_1:71177055-71177074 Msa0222160:intron 60.0%
TCGCATCCTACTGGGCACGT+GGG - chr2_1:71177064-71177083 None:intergenic 60.0%
GTGCCCAGTAGGATGCGACT+TGG + chr2_1:71177066-71177085 Msa0222160:intron 60.0%
GCCCACACGACTTGTGATCC+TGG + chr2_1:71177133-71177152 Msa0222160:intron 60.0%
GGTAGGCTCCTCCATGTTGC+TGG - chr2_1:71178627-71178646 None:intergenic 60.0%
GTGGTTCATCTCAGCGGAGC+CGG + chr2_1:71178761-71178780 Msa0222160:CDS 60.0%
AGTAAATTGGGGGGGGGGGG+GGG - chr2_1:71174557-71174576 None:intergenic 65.0%
TCAACAGCCCTCTGGTGCCC+AGG + chr2_1:71174637-71174656 Msa0222160:intron 65.0%
GTCGCATCCTACTGGGCACG+TGG - chr2_1:71177065-71177084 None:intergenic 65.0%
CACAAGTCGTGTGGGCACGG+CGG - chr2_1:71177129-71177148 None:intergenic 65.0%
GTTCATCTCAGCGGAGCCGG+AGG + chr2_1:71178764-71178783 Msa0222160:CDS 65.0%
TAAATTGGGGGGGGGGGGGG+GGG - chr2_1:71174555-71174574 None:intergenic 70.0%
GTAAATTGGGGGGGGGGGGG+GGG - chr2_1:71174556-71174575 None:intergenic 70.0%
AAATTGGGGGGGGGGGGGGG+GGG - chr2_1:71174554-71174573 None:intergenic 75.0%
! AATTGGGGGGGGGGGGGGGG+GGG - chr2_1:71174553-71174572 None:intergenic 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG - chr2_1:71174552-71174571 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGATG+TGG - chr2_1:71174545-71174564 None:intergenic 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG - chr2_1:71174551-71174570 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 71170310 71178978 71170310 ID=Msa0222160;Name=Msa0222160
chr2_1 mRNA 71170310 71178978 71170310 ID=Msa0222160-mRNA-1;Parent=Msa0222160;Name=Msa0222160-mRNA-1;_AED=0.03;_eAED=0.03;_QI=155|1|1|1|0.85|0.75|8|39|963
chr2_1 exon 71170310 71170433 71170310 ID=Msa0222160-mRNA-1:exon:20426;Parent=Msa0222160-mRNA-1
chr2_1 exon 71171713 71172263 71171713 ID=Msa0222160-mRNA-1:exon:20427;Parent=Msa0222160-mRNA-1
chr2_1 exon 71172578 71173433 71172578 ID=Msa0222160-mRNA-1:exon:20428;Parent=Msa0222160-mRNA-1
chr2_1 exon 71174465 71174516 71174465 ID=Msa0222160-mRNA-1:exon:20429;Parent=Msa0222160-mRNA-1
chr2_1 exon 71174770 71174844 71174770 ID=Msa0222160-mRNA-1:exon:20430;Parent=Msa0222160-mRNA-1
chr2_1 exon 71174930 71175196 71174930 ID=Msa0222160-mRNA-1:exon:20431;Parent=Msa0222160-mRNA-1
chr2_1 exon 71176739 71176942 71176739 ID=Msa0222160-mRNA-1:exon:20432;Parent=Msa0222160-mRNA-1
chr2_1 exon 71178022 71178978 71178022 ID=Msa0222160-mRNA-1:exon:20433;Parent=Msa0222160-mRNA-1
chr2_1 five_prime_UTR 71170310 71170433 71170310 ID=Msa0222160-mRNA-1:five_prime_utr;Parent=Msa0222160-mRNA-1
chr2_1 five_prime_UTR 71171713 71171743 71171713 ID=Msa0222160-mRNA-1:five_prime_utr;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71171744 71172263 71171744 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71172578 71173433 71172578 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71174465 71174516 71174465 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71174770 71174844 71174770 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71174930 71175196 71174930 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71176739 71176942 71176739 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 CDS 71178022 71178939 71178022 ID=Msa0222160-mRNA-1:cds;Parent=Msa0222160-mRNA-1
chr2_1 three_prime_UTR 71178940 71178978 71178940 ID=Msa0222160-mRNA-1:three_prime_utr;Parent=Msa0222160-mRNA-1
Gene Sequence

>Msa0222160

ATGGTAAAAAGTACTCGTTCTAGTCAAAAGGCCAAGGATGAAGAAAATAATAATGGGAGGGTGACCCGAAGCAGCGAGAAAGCAAAAATAAAAGCACATCCCAATGTATCGGATACAGCTGGTATTAGAAAGTCTTCTAGAGAAAAACCATCAAAGATAATTGCAACCTCTTCAAGTACTCAGAAGTCTGAGCAAGTAGAGAAGGGAACACTGCCAGCTCCTGAAACCAGAAGAAAGTCTGTAAGGGTCGAGAAAATGAAAACACCAACGCCAAGTCCTTTGACGAGATCTGGCAAAACTAGGAATCATTCTTTTTCTGGTCCTTCAGATTCTAAAAGTGCAGGTTCTCTTGGTTCAATTTCGAGACAGAAGCTACAAAAAGAGAAGAGTGTGAAGCAATTGACATTTGAAGCCAAGGAAGTGAATGAAAATGAGGAACACAACGTGGAAAGTTCCCAGGTGAAAAGAAAGAAAATGACCGCCCTGATGTATCGGTCTCTCTTTACACAACCAAAGAAAGATTGCCTTGGGCATTCTGATAATATTAGCAAGCCAAATCAGGAAGGTGACAACAGTAGTGGAGCCAAGATTGACGAGTTATCTAAAGGAAGTTGTTCAGATAACAAAGAAGTATCGAAGAACGGTACACTGCCATCGGAAGATGCCACAGCAAAAGAGACCACAGTTGACTCTAGGATTGGCGATAAAAGGTGCCAAAGCAAAGGTGACAATAGTAGTGGAGCCAAGATTGATGAGTTGTCTAAAGGAAGTTGTTCAGACAATGAAGAAGTCTCGAAGAATGGTACACTTCCATTCGAAGATGGGAAAGCAAAAGAAACCAGAGTTGACTCTAGGACCGACGAGCCAAGGTGCCAAAGCAAAGCTGACAACAGTATTGGAGCCAAGATTGATGAGTTATCTAAAGGAAGTTGTTCAGATAATAAAGAAGTCTCAAAGAATGGTACACTGACATCTGAAGATGCCAAAGCAAAAGAGACCAGAGTTAACTCTAGGTTGAGTGGGCCTATGACAGATTTAGCAGAAAATTGTGCGACTCCTGGTTCATTTATACCATCTAACACCCCAACTTATGAGACTAGTGTGGTGCCCAGAAGAGGACAGCCTGATTGCTGCGAAGAGGAGACATTACGAACATTAGTGTCAGGAGATTCTATATTCGATGATGATGACTTGGTCAGTAACAATGCTGGTCTTGGTGGGGGTGAAAAATTAGCACCTTCTAAGAGAAAGGCAATCACAGTGGACATTGATTCAAATGTTCCTTCCTCATTATCTAAAGGAGACAGAAGCAACTTGATCCCTGATGCTCTCCCTTCAAAACTAGGTGGCAACGAGTCATGTTCCAAACGAATAAGGTTGGATTTTAATCCTACAGCCGAGGAGTCGCGTAACCCATGTGCAACTGAGGACATAGATGTCATTGAGGAAACCGTGCAGCAGAAGGATAAGAGCGACCACGCAAGTGGAACTGGACACCTTAAGGGTAGCACTGTGGAAGACAAAAATATTCATGCTCTTCTTGATGGTCAAAGTGTTGTTCATCCGAAGGAGAAAGTGTCAAGTGATATTGCAAACAGATGCAAGTCGGACTCCTATAAGTTGGTTGAGTATTGGGTTCCTGTACAGATATCTAATGTGCAGCTTGAGCAGTATTGTAATACTTTACTTTCAAATGCTTCATTTCTTTGCTCGTCGCCAAAGATTGATAGTGTTGGGGCCATTCGTGATGTCCTTATTTCAATCCGGAAGTGTTGTAATCATCCCTATATTATTGAAGAATCCCTGCAACCTTTACTACTAAAGGGCCTTGAAGAAGTTGAGTATCCGAGTCAAAAAGAAAAAGCCGTTGCATATCTGAATGTTGGAATAAAAGCAAGTGGCAAGCTTCAACTACTTGATTCAATGCTCACAGAGTTGAGAAAAAATAAATTAAGGGCACTCATACTTTTTCAGCCAATTGGAGTTTCTGGAAAGACTTCAATAGTAGATATTTTGGATGACTTCCTGCGACAAAGATTTGGCGAAGATTCGTATGAAAGAATTGATAATTGTCTTACGGCTTCCAAGAAGCAAGCTGCCACGAAGATATTTAACGACAAGAATAACAAGCGATTTTTCTTTTTGATGGAAACAAGTGCCTGCCATCCTAGCATAAAATTGTCATCAATTGACGCTATTATTATATTTGACAGTGACTGGAACCCGATGAATGATATAAGATCCCTTCAGAAGTTGACACTTGATTCACAGTTTGAATCGATCAAAACATTCCGTTTATATTCACCTTTCACTGTTGAAGAGAAAGCTTTGATTCTCTCTAGGCAAGGTAAGACCCTGGACATCAACTGTCAATCTTCAAGTCGGGGTCTCAGTCATACTCTCTTGATGTGGGGCGCAGTTCATCTTTTTGACGAGTTGAGAGTTTTCCATGACGGTGCAACTTCCACGTCAAATCTAAAACCACTGCTGGAAGAAACAGTTTCACAGTTCTCATCCTGTCTAGCTGATGTTGGTGAAGATTCTGACACAAGCAACTGCTCAATTTTATTGAAAGTCCAGCAACATGGAGGAGCCTACCTTGCAAATTCTCCTTTGTTTGGTGAGCAGGAATTTAGGTCGCCGGATGAAGAGGTACCACAAACGTTTTGGAATAATCTGTTGGTGGGGAGACAGTTTCAATGGAAGTACTCATGTGGTTCATCTCAGCGGAGCCGGAGGAGAGTTCAGCCTTTTAATAATTTGGCAGGTGGGACCGACCATGTGAATGAAGGCACAGCAAAGAAGCGCTTGAAAGTAAGCAACACTAATGTTGATCAGCCTTCATCAAAATCTGTAGGTGAAAAGTTACCCAATGGAATCAAGGCAGGTTAG
Protein sequence

>Msa0222160

MVKSTRSSQKAKDEENNNGRVTRSSEKAKIKAHPNVSDTAGIRKSSREKPSKIIATSSSTQKSEQVEKGTLPAPETRRKSVRVEKMKTPTPSPLTRSGKTRNHSFSGPSDSKSAGSLGSISRQKLQKEKSVKQLTFEAKEVNENEEHNVESSQVKRKKMTALMYRSLFTQPKKDCLGHSDNISKPNQEGDNSSGAKIDELSKGSCSDNKEVSKNGTLPSEDATAKETTVDSRIGDKRCQSKGDNSSGAKIDELSKGSCSDNEEVSKNGTLPFEDGKAKETRVDSRTDEPRCQSKADNSIGAKIDELSKGSCSDNKEVSKNGTLTSEDAKAKETRVNSRLSGPMTDLAENCATPGSFIPSNTPTYETSVVPRRGQPDCCEEETLRTLVSGDSIFDDDDLVSNNAGLGGGEKLAPSKRKAITVDIDSNVPSSLSKGDRSNLIPDALPSKLGGNESCSKRIRLDFNPTAEESRNPCATEDIDVIEETVQQKDKSDHASGTGHLKGSTVEDKNIHALLDGQSVVHPKEKVSSDIANRCKSDSYKLVEYWVPVQISNVQLEQYCNTLLSNASFLCSSPKIDSVGAIRDVLISIRKCCNHPYIIEESLQPLLLKGLEEVEYPSQKEKAVAYLNVGIKASGKLQLLDSMLTELRKNKLRALILFQPIGVSGKTSIVDILDDFLRQRFGEDSYERIDNCLTASKKQAATKIFNDKNNKRFFFLMETSACHPSIKLSSIDAIIIFDSDWNPMNDIRSLQKLTLDSQFESIKTFRLYSPFTVEEKALILSRQGKTLDINCQSSSRGLSHTLLMWGAVHLFDELRVFHDGATSTSNLKPLLEETVSQFSSCLADVGEDSDTSNCSILLKVQQHGGAYLANSPLFGEQEFRSPDEEVPQTFWNNLLVGRQFQWKYSCGSSQRSRRRVQPFNNLAGGTDHVNEGTAKKRLKVSNTNVDQPSSKSVGEKLPNGIKAG*