Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162660 | sp|Q8LFU0|NFYAA_ARATH | 44.518 | 301 | 109 | 13 | 29 | 325 | 13 | 259 | 1.59e-60 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162660 | G7I8J1 | 96.988 | 332 | 10 | 0 | 1 | 332 | 1 | 332 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0162660 | TF | NF-YA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0162660 | Msa0164430 | 0.965007 | 4.751330e-124 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162660 | MtrunA17_Chr1g0177091 | 96.988 | 332 | 10 | 0 | 1 | 332 | 1 | 332 | 0.0 | 674 |
| Msa0162660 | MtrunA17_Chr7g0267581 | 71.125 | 329 | 86 | 6 | 1 | 324 | 1 | 325 | 1.14e-162 | 457 |
| Msa0162660 | MtrunA17_Chr8g0352251 | 50.400 | 125 | 49 | 4 | 128 | 241 | 109 | 231 | 7.03e-30 | 115 |
| Msa0162660 | MtrunA17_Chr2g0300261 | 49.624 | 133 | 49 | 4 | 116 | 231 | 14 | 145 | 1.53e-29 | 113 |
| Msa0162660 | MtrunA17_Chr2g0292411 | 50.467 | 107 | 51 | 1 | 133 | 237 | 80 | 186 | 2.12e-28 | 109 |
| Msa0162660 | MtrunA17_Chr3g0103391 | 49.167 | 120 | 45 | 4 | 127 | 232 | 125 | 242 | 3.02e-27 | 109 |
| Msa0162660 | MtrunA17_Chr8g0343451 | 47.414 | 116 | 46 | 4 | 120 | 222 | 110 | 223 | 5.01e-26 | 105 |
| Msa0162660 | MtrunA17_Chr2g0329811 | 36.158 | 177 | 101 | 4 | 95 | 260 | 108 | 283 | 1.44e-24 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162660 | AT5G06510.1 | 44.518 | 301 | 109 | 13 | 29 | 325 | 13 | 259 | 1.62e-61 | 197 |
| Msa0162660 | AT5G06510.5 | 44.518 | 301 | 109 | 13 | 29 | 325 | 13 | 259 | 1.62e-61 | 197 |
| Msa0162660 | AT5G06510.2 | 44.518 | 301 | 109 | 13 | 29 | 325 | 13 | 259 | 1.62e-61 | 197 |
| Msa0162660 | AT5G06510.6 | 44.518 | 301 | 109 | 13 | 29 | 325 | 13 | 259 | 1.62e-61 | 197 |
| Msa0162660 | AT3G05690.1 | 43.925 | 321 | 111 | 17 | 27 | 326 | 12 | 284 | 8.16e-56 | 184 |
| Msa0162660 | AT5G06510.3 | 48.511 | 235 | 76 | 9 | 93 | 325 | 19 | 210 | 1.14e-55 | 181 |
| Msa0162660 | AT3G05690.2 | 43.925 | 321 | 111 | 17 | 27 | 326 | 49 | 321 | 6.12e-55 | 182 |
| Msa0162660 | AT5G06510.4 | 51.269 | 197 | 58 | 8 | 131 | 325 | 4 | 164 | 5.84e-49 | 162 |
| Msa0162660 | AT5G06510.7 | 51.269 | 197 | 58 | 8 | 131 | 325 | 4 | 164 | 5.84e-49 | 162 |
| Msa0162660 | AT2G34720.1 | 40.462 | 173 | 86 | 5 | 97 | 256 | 19 | 187 | 3.99e-32 | 119 |
| Msa0162660 | AT1G30500.1 | 49.580 | 119 | 54 | 1 | 127 | 239 | 53 | 171 | 1.17e-31 | 117 |
| Msa0162660 | AT1G30500.2 | 47.656 | 128 | 57 | 1 | 122 | 239 | 48 | 175 | 5.86e-31 | 115 |
| Msa0162660 | AT2G34720.2 | 46.377 | 138 | 58 | 4 | 132 | 256 | 18 | 152 | 3.36e-30 | 113 |
| Msa0162660 | AT2G34720.3 | 46.377 | 138 | 58 | 4 | 132 | 256 | 18 | 152 | 3.36e-30 | 113 |
| Msa0162660 | AT5G12840.4 | 34.615 | 286 | 149 | 12 | 1 | 266 | 1 | 268 | 5.80e-30 | 115 |
| Msa0162660 | AT5G12840.2 | 34.615 | 286 | 149 | 12 | 1 | 266 | 1 | 268 | 5.80e-30 | 115 |
| Msa0162660 | AT1G72830.1 | 42.045 | 176 | 78 | 7 | 132 | 293 | 135 | 300 | 8.89e-30 | 116 |
| Msa0162660 | AT5G12840.5 | 45.695 | 151 | 64 | 5 | 127 | 266 | 126 | 269 | 3.14e-29 | 113 |
| Msa0162660 | AT5G12840.3 | 45.695 | 151 | 64 | 5 | 127 | 266 | 126 | 269 | 3.14e-29 | 113 |
| Msa0162660 | AT5G12840.1 | 45.695 | 151 | 64 | 5 | 127 | 266 | 126 | 269 | 3.14e-29 | 113 |
| Msa0162660 | AT1G72830.2 | 41.808 | 177 | 78 | 8 | 132 | 293 | 135 | 301 | 3.89e-28 | 112 |
| Msa0162660 | AT1G17590.3 | 59.259 | 81 | 31 | 2 | 143 | 223 | 153 | 231 | 5.84e-26 | 105 |
| Msa0162660 | AT1G17590.2 | 59.259 | 81 | 31 | 2 | 143 | 223 | 153 | 231 | 5.84e-26 | 105 |
| Msa0162660 | AT1G17590.4 | 59.259 | 81 | 31 | 2 | 143 | 223 | 153 | 231 | 5.84e-26 | 105 |
| Msa0162660 | AT1G17590.1 | 59.259 | 81 | 31 | 2 | 143 | 223 | 153 | 231 | 5.84e-26 | 105 |
| Msa0162660 | AT1G54160.1 | 64.000 | 75 | 26 | 1 | 149 | 223 | 164 | 237 | 5.01e-25 | 103 |
| Msa0162660 | AT3G20910.1 | 51.402 | 107 | 36 | 4 | 133 | 225 | 126 | 230 | 1.90e-24 | 101 |
| Msa0162660 | AT3G14020.2 | 51.961 | 102 | 40 | 3 | 132 | 229 | 140 | 236 | 1.19e-23 | 99.4 |
| Msa0162660 | AT3G14020.1 | 51.961 | 102 | 40 | 3 | 132 | 229 | 140 | 236 | 1.19e-23 | 99.4 |
| Msa0162660 | AT1G72830.3 | 38.182 | 165 | 75 | 6 | 132 | 293 | 135 | 275 | 2.00e-21 | 93.2 |
Find 74 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGGGCTCTTCTCAACTTA+TGG | 0.210491 | 1_4:+39916540 | Msa0162660:CDS |
| AACACAAAAGTTTCTGCTAA+TGG | 0.270945 | 1_4:+39917382 | Msa0162660:CDS |
| CGGATCTACTGTCCACTCTT+TGG | 0.272014 | 1_4:+39917615 | Msa0162660:CDS |
| GTTGAACAATTGTTTGATAA+AGG | 0.289283 | 1_4:+39916045 | Msa0162660:CDS |
| TATGGATCTCAACCTGTTTA+TGG | 0.294520 | 1_4:+39915931 | Msa0162660:CDS |
| TTGGAAAGCTCTAGTGAAAA+AGG | 0.317460 | 1_4:-39915979 | None:intergenic |
| TGACGCGATTCGTGCATATA+TGG | 0.329752 | 1_4:-39917313 | None:intergenic |
| CTGTGCAAAATATCCTTATA+TGG | 0.336858 | 1_4:+39916509 | Msa0162660:CDS |
| GTATTGTCATGCCAACAAAA+TGG | 0.358807 | 1_4:+39917662 | Msa0162660:CDS |
| CCGTAAAATTGATCCATATA+AGG | 0.372097 | 1_4:-39916522 | None:intergenic |
| TCATGTTCTTTAAGATAAAC+AGG | 0.380584 | 1_4:-39915841 | None:intergenic |
| ACCTCTGACCCCGAGACGTT+TGG | 0.381733 | 1_4:-39917541 | None:intergenic |
| AGTTCTTACTCGGAGCAATT+TGG | 0.382158 | 1_4:-39916011 | None:intergenic |
| GGATCTACTGTCCACTCTTT+GGG | 0.389114 | 1_4:+39917616 | Msa0162660:CDS |
| AGCAATTTGGTCTATGTAGT+TGG | 0.394015 | 1_4:-39915998 | None:intergenic |
| TTGGGAGACATGATCGATAC+TGG | 0.406979 | 1_4:+39917634 | Msa0162660:CDS |
| CAAGACTCTCCGCCATAAAC+AGG | 0.413188 | 1_4:-39915943 | None:intergenic |
| TGCTTAGCATTCACGTATGT+TGG | 0.430698 | 1_4:-39917105 | None:intergenic |
| CATCTGTGACTTCAGCTCCA+TGG | 0.437594 | 1_4:+39915896 | Msa0162660:CDS |
| AGCTTTACTGTCAATCATAT+CGG | 0.452099 | 1_4:+39917595 | Msa0162660:CDS |
| GGAGGCAGTCCAAACGTCTC+GGG | 0.456102 | 1_4:+39917532 | Msa0162660:CDS |
| TTTATTCTGAAGCACAGCTT+TGG | 0.466385 | 1_4:-39917163 | None:intergenic |
| GATAAGGTTGCTTGATGATT+CGG | 0.479300 | 1_4:-39916316 | None:intergenic |
| TGTTAAGATTTACCATAGGC+TGG | 0.484839 | 1_4:-39916393 | None:intergenic |
| ACAAAATGGTTTGCAGCAGC+TGG | 0.492247 | 1_4:+39917676 | Msa0162660:CDS |
| AAACGACCACCGCATCCTCT+TGG | 0.498137 | 1_4:-39917355 | None:intergenic |
| AAAGTTTCTGCTAATGGAAA+CGG | 0.509349 | 1_4:+39917388 | Msa0162660:CDS |
| TGGAACTTTAAATTCGTCAA+AGG | 0.512980 | 1_4:+39917501 | Msa0162660:CDS |
| CCATGGTGGAGTAATGCCTA+TGG | 0.514299 | 1_4:+39915913 | Msa0162660:CDS |
| AGCAGCTGGTAGACAGCTGC+TGG | 0.514662 | 1_4:+39917690 | Msa0162660:CDS |
| CCTAGCTCAAAACGGTTAAG+TGG | 0.514977 | 1_4:-39916364 | None:intergenic |
| AATTCGTCAAAGGAGACAAA+CGG | 0.518779 | 1_4:+39917511 | Msa0162660:CDS |
| TTCGGAACTCTGAGAACCAC+TGG | 0.518971 | 1_4:-39917461 | None:intergenic |
| TCTGCTAATGGAAACGGTAA+AGG | 0.520240 | 1_4:+39917394 | Msa0162660:CDS |
| CCGAGTAAGAACTTAGTTCG+AGG | 0.522823 | 1_4:+39916021 | Msa0162660:CDS |
| AACTTATGGACCTCAAATCT+CGG | 0.523805 | 1_4:+39916554 | Msa0162660:CDS |
| TAAATACAAACCGAGATTTG+AGG | 0.527847 | 1_4:-39916564 | None:intergenic |
| CGGAGGCAGTCCAAACGTCT+CGG | 0.528352 | 1_4:+39917531 | Msa0162660:CDS |
| GGAAATGTCCACAATTCTGT+TGG | 0.536104 | 1_4:+39915865 | Msa0162660:CDS |
| GGTGACTAGCATGTATTCAC+AGG | 0.537442 | 1_4:+39917561 | Msa0162660:CDS |
| CCTCGAACTAAGTTCTTACT+CGG | 0.539423 | 1_4:-39916021 | None:intergenic |
| GGTTAAAACCTAGCTCAAAA+CGG | 0.541551 | 1_4:-39916372 | None:intergenic |
| GGCCTACAGCTGCAGTCCAG+TGG | 0.549836 | 1_4:+39917445 | Msa0162660:CDS |
| AACCTCAGATTGTAAGACTT+CGG | 0.557052 | 1_4:-39917479 | None:intergenic |
| TTCCGAAGTCTTACAATCTG+AGG | 0.557924 | 1_4:+39917477 | Msa0162660:CDS |
| AAATGATGATTGCAGTGATA+AGG | 0.560313 | 1_4:-39916332 | None:intergenic |
| TCCAAACGTCTCGGGGTCAG+AGG | 0.561807 | 1_4:+39917540 | Msa0162660:CDS |
| TCATCAGATGTCATGCTAAG+TGG | 0.562219 | 1_4:-39917078 | None:intergenic |
| AAAACTGTCCAACAGAATTG+TGG | 0.562402 | 1_4:-39915873 | None:intergenic |
| GTTTATCTTAAAGAACATGA+AGG | 0.564171 | 1_4:+39915844 | Msa0162660:CDS |
| ATAAACAGGTTGAGATCCAT+AGG | 0.573638 | 1_4:-39915929 | None:intergenic |
| GAAGTCTTACAATCTGAGGT+TGG | 0.582591 | 1_4:+39917481 | Msa0162660:CDS |
| GTTTATGGCGGAGAGTCTTG+TGG | 0.587983 | 1_4:+39915946 | Msa0162660:CDS |
| CTGTGACTTCAGCTCCATGG+TGG | 0.603679 | 1_4:+39915899 | Msa0162660:CDS |
| ATGCGTAGACCAAGAGGATG+CGG | 0.604666 | 1_4:+39917346 | Msa0162660:CDS |
| CGATCATGTCTCCCAAAGAG+TGG | 0.606030 | 1_4:-39917627 | None:intergenic |
| CTAATGGAAACGGTAAAGGC+GGG | 0.608350 | 1_4:+39917398 | Msa0162660:CDS |
| GAGGCAGTCCAAACGTCTCG+GGG | 0.630984 | 1_4:+39917533 | Msa0162660:CDS |
| GCTAATGGAAACGGTAAAGG+CGG | 0.633457 | 1_4:+39917397 | Msa0162660:CDS |
| TAAATTGATAAAGCGTAACA+AGG | 0.648504 | 1_4:+39917182 | Msa0162660:CDS |
| CCATAGGCATTACTCCACCA+TGG | 0.653720 | 1_4:-39915913 | None:intergenic |
| GACATGATCGATACTGGACA+CGG | 0.660565 | 1_4:+39917640 | Msa0162660:CDS |
| CTTAGCATGACATCTGATGA+CGG | 0.665381 | 1_4:+39917081 | Msa0162660:CDS |
| CATGCAATGCGTAGACCAAG+AGG | 0.668981 | 1_4:+39917340 | Msa0162660:CDS |
| CGTAGACCAAGAGGATGCGG+TGG | 0.670871 | 1_4:+39917349 | Msa0162660:CDS |
| GTGAATGCTAAGCAATACCA+TGG | 0.675463 | 1_4:+39917114 | Msa0162660:CDS |
| GGATCTCAACCTGTTTATGG+CGG | 0.678188 | 1_4:+39915934 | Msa0162660:CDS |
| GTGACTAGCATGTATTCACA+GGG | 0.683616 | 1_4:+39917562 | Msa0162660:CDS |
| GTCTGCGTCTGATGATACCA+TGG | 0.685059 | 1_4:-39917131 | None:intergenic |
| AACCACTGGACTGCAGCTGT+AGG | 0.688049 | 1_4:-39917447 | None:intergenic |
| AGTGAAGAGAACATAAACAC+TGG | 0.692663 | 1_4:+39917421 | Msa0162660:CDS |
| GAAGAGAACATAAACACTGG+TGG | 0.703232 | 1_4:+39917424 | Msa0162660:CDS |
| ACTAGCATGTATTCACAGGG+AGG | 0.747620 | 1_4:+39917565 | Msa0162660:CDS |
| TCGTCAAAGGAGACAAACGG+AGG | 0.770276 | 1_4:+39917514 | Msa0162660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAATTATGGTTA+AGG | + | chr1_4:39916819-39916838 | Msa0162660:intron | 10.0% |
| !! | GTATCTATATTTAATAAATT+AGG | + | chr1_4:39917041-39917060 | Msa0162660:intron | 10.0% |
| !! | TAAAAAAAAAATTATGGTTA+AGG | + | chr1_4:39916819-39916838 | Msa0162660:intron | 10.0% |
| !! | GTATCTATATTTAATAAATT+AGG | + | chr1_4:39917041-39917060 | Msa0162660:intron | 10.0% |
| !!! | CATCATATAATTCAATTTTA+AGG | - | chr1_4:39916925-39916944 | None:intergenic | 15.0% |
| !!! | CATCATATAATTCAATTTTA+AGG | - | chr1_4:39916925-39916944 | None:intergenic | 15.0% |
| !!! | CTTGTTATTCAATATAATTC+TGG | + | chr1_4:39916100-39916119 | Msa0162660:intron | 20.0% |
| !!! | TGAATTGATTTTTGTTAAGT+TGG | + | chr1_4:39916130-39916149 | Msa0162660:intron | 20.0% |
| !! | TTATGTAACATGATTTATGT+CGG | + | chr1_4:39916176-39916195 | Msa0162660:intron | 20.0% |
| !! | AATACTAAAACATGATCAAA+GGG | - | chr1_4:39916426-39916445 | None:intergenic | 20.0% |
| !! | AAATACTAAAACATGATCAA+AGG | - | chr1_4:39916427-39916446 | None:intergenic | 20.0% |
| !! | TTATGTACTAAAACATTGAT+TGG | - | chr1_4:39916453-39916472 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAATGAGTTTT+AGG | + | chr1_4:39916763-39916782 | Msa0162660:intron | 20.0% |
| !! | CCTTAATACATGTATAAAAA+GGG | - | chr1_4:39917274-39917293 | None:intergenic | 20.0% |
| !! | ACCTTAATACATGTATAAAA+AGG | - | chr1_4:39917275-39917294 | None:intergenic | 20.0% |
| !!! | CTTGTTATTCAATATAATTC+TGG | + | chr1_4:39916100-39916119 | Msa0162660:intron | 20.0% |
| !!! | TGAATTGATTTTTGTTAAGT+TGG | + | chr1_4:39916130-39916149 | Msa0162660:intron | 20.0% |
| !! | TTATGTAACATGATTTATGT+CGG | + | chr1_4:39916176-39916195 | Msa0162660:intron | 20.0% |
| !! | AATACTAAAACATGATCAAA+GGG | - | chr1_4:39916426-39916445 | None:intergenic | 20.0% |
| !! | AAATACTAAAACATGATCAA+AGG | - | chr1_4:39916427-39916446 | None:intergenic | 20.0% |
| !! | TTATGTACTAAAACATTGAT+TGG | - | chr1_4:39916453-39916472 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAATGAGTTTT+AGG | + | chr1_4:39916763-39916782 | Msa0162660:intron | 20.0% |
| !! | CCTTAATACATGTATAAAAA+GGG | - | chr1_4:39917274-39917293 | None:intergenic | 20.0% |
| !! | ACCTTAATACATGTATAAAA+AGG | - | chr1_4:39917275-39917294 | None:intergenic | 20.0% |
| !!! | TCATGTTCTTTAAGATAAAC+AGG | - | chr1_4:39915844-39915863 | None:intergenic | 25.0% |
| ! | GTTTATCTTAAAGAACATGA+AGG | + | chr1_4:39915844-39915863 | Msa0162660:CDS | 25.0% |
| ! | GTTGAACAATTGTTTGATAA+AGG | + | chr1_4:39916045-39916064 | Msa0162660:CDS | 25.0% |
| ! | TATATTGAATAACAAGTACC+TGG | - | chr1_4:39916096-39916115 | None:intergenic | 25.0% |
| ! | TGTAGAAGAAAATGTTTGAA+TGG | - | chr1_4:39916269-39916288 | None:intergenic | 25.0% |
| !!! | GTTTTGTTAAGATTTACCAT+AGG | - | chr1_4:39916400-39916419 | None:intergenic | 25.0% |
| !! | CCTTATATGGATCAATTTTA+CGG | + | chr1_4:39916522-39916541 | Msa0162660:CDS | 25.0% |
| !! | CTTATATGGATCAATTTTAC+GGG | + | chr1_4:39916523-39916542 | Msa0162660:CDS | 25.0% |
| ! | TAAATTGATAAAGCGTAACA+AGG | + | chr1_4:39917182-39917201 | Msa0162660:CDS | 25.0% |
| !! | CCCTTTTTATACATGTATTA+AGG | + | chr1_4:39917271-39917290 | Msa0162660:intron | 25.0% |
| !!! | TCATGTTCTTTAAGATAAAC+AGG | - | chr1_4:39915844-39915863 | None:intergenic | 25.0% |
| ! | GTTTATCTTAAAGAACATGA+AGG | + | chr1_4:39915844-39915863 | Msa0162660:CDS | 25.0% |
| ! | GTTGAACAATTGTTTGATAA+AGG | + | chr1_4:39916045-39916064 | Msa0162660:CDS | 25.0% |
| ! | TATATTGAATAACAAGTACC+TGG | - | chr1_4:39916096-39916115 | None:intergenic | 25.0% |
| ! | TGTAGAAGAAAATGTTTGAA+TGG | - | chr1_4:39916269-39916288 | None:intergenic | 25.0% |
| !!! | GTTTTGTTAAGATTTACCAT+AGG | - | chr1_4:39916400-39916419 | None:intergenic | 25.0% |
| !! | CCTTATATGGATCAATTTTA+CGG | + | chr1_4:39916522-39916541 | Msa0162660:CDS | 25.0% |
| !! | CTTATATGGATCAATTTTAC+GGG | + | chr1_4:39916523-39916542 | Msa0162660:CDS | 25.0% |
| ! | TAAATTGATAAAGCGTAACA+AGG | + | chr1_4:39917182-39917201 | Msa0162660:CDS | 25.0% |
| !! | CCCTTTTTATACATGTATTA+AGG | + | chr1_4:39917271-39917290 | Msa0162660:intron | 25.0% |
| CTAGTGAAAAAGGTTTCATT+TGG | - | chr1_4:39915972-39915991 | None:intergenic | 30.0% | |
| ATAACAAGTACCTGGAAAAA+TGG | - | chr1_4:39916088-39916107 | None:intergenic | 30.0% | |
| !!! | GATTTTTGTTAAGTTGGTTC+TGG | + | chr1_4:39916136-39916155 | Msa0162660:intron | 30.0% |
| AAATGATGATTGCAGTGATA+AGG | - | chr1_4:39916335-39916354 | None:intergenic | 30.0% | |
| CTGTGCAAAATATCCTTATA+TGG | + | chr1_4:39916509-39916528 | Msa0162660:CDS | 30.0% | |
| CCGTAAAATTGATCCATATA+AGG | - | chr1_4:39916525-39916544 | None:intergenic | 30.0% | |
| TAAATACAAACCGAGATTTG+AGG | - | chr1_4:39916567-39916586 | None:intergenic | 30.0% | |
| GATAGTTGTAAACAGATTTC+TGG | - | chr1_4:39916694-39916713 | None:intergenic | 30.0% | |
| AACACAGATGAGAAGAAAAT+TGG | + | chr1_4:39916881-39916900 | Msa0162660:intron | 30.0% | |
| ! | TGAAGTTTTTGCATGTATTC+AGG | + | chr1_4:39916955-39916974 | Msa0162660:intron | 30.0% |
| ! | AGTTTTCAAACATTGTTGTG+AGG | - | chr1_4:39917227-39917246 | None:intergenic | 30.0% |
| AACACAAAAGTTTCTGCTAA+TGG | + | chr1_4:39917382-39917401 | Msa0162660:CDS | 30.0% | |
| AAAGTTTCTGCTAATGGAAA+CGG | + | chr1_4:39917388-39917407 | Msa0162660:CDS | 30.0% | |
| TGGAACTTTAAATTCGTCAA+AGG | + | chr1_4:39917501-39917520 | Msa0162660:CDS | 30.0% | |
| AGCTTTACTGTCAATCATAT+CGG | + | chr1_4:39917595-39917614 | Msa0162660:CDS | 30.0% | |
| CTAGTGAAAAAGGTTTCATT+TGG | - | chr1_4:39915972-39915991 | None:intergenic | 30.0% | |
| ATAACAAGTACCTGGAAAAA+TGG | - | chr1_4:39916088-39916107 | None:intergenic | 30.0% | |
| !!! | GATTTTTGTTAAGTTGGTTC+TGG | + | chr1_4:39916136-39916155 | Msa0162660:intron | 30.0% |
| AAATGATGATTGCAGTGATA+AGG | - | chr1_4:39916335-39916354 | None:intergenic | 30.0% | |
| CTGTGCAAAATATCCTTATA+TGG | + | chr1_4:39916509-39916528 | Msa0162660:CDS | 30.0% | |
| CCGTAAAATTGATCCATATA+AGG | - | chr1_4:39916525-39916544 | None:intergenic | 30.0% | |
| TAAATACAAACCGAGATTTG+AGG | - | chr1_4:39916567-39916586 | None:intergenic | 30.0% | |
| GATAGTTGTAAACAGATTTC+TGG | - | chr1_4:39916694-39916713 | None:intergenic | 30.0% | |
| AACACAGATGAGAAGAAAAT+TGG | + | chr1_4:39916881-39916900 | Msa0162660:intron | 30.0% | |
| ! | TGAAGTTTTTGCATGTATTC+AGG | + | chr1_4:39916955-39916974 | Msa0162660:intron | 30.0% |
| ! | AGTTTTCAAACATTGTTGTG+AGG | - | chr1_4:39917227-39917246 | None:intergenic | 30.0% |
| AACACAAAAGTTTCTGCTAA+TGG | + | chr1_4:39917382-39917401 | Msa0162660:CDS | 30.0% | |
| AAAGTTTCTGCTAATGGAAA+CGG | + | chr1_4:39917388-39917407 | Msa0162660:CDS | 30.0% | |
| TGGAACTTTAAATTCGTCAA+AGG | + | chr1_4:39917501-39917520 | Msa0162660:CDS | 30.0% | |
| AGCTTTACTGTCAATCATAT+CGG | + | chr1_4:39917595-39917614 | Msa0162660:CDS | 30.0% | |
| AAAACTGTCCAACAGAATTG+TGG | - | chr1_4:39915876-39915895 | None:intergenic | 35.0% | |
| ! | ATAAACAGGTTGAGATCCAT+AGG | - | chr1_4:39915932-39915951 | None:intergenic | 35.0% |
| TATGGATCTCAACCTGTTTA+TGG | + | chr1_4:39915931-39915950 | Msa0162660:CDS | 35.0% | |
| ! | TTGGAAAGCTCTAGTGAAAA+AGG | - | chr1_4:39915982-39916001 | None:intergenic | 35.0% |
| AGCAATTTGGTCTATGTAGT+TGG | - | chr1_4:39916001-39916020 | None:intergenic | 35.0% | |
| !! | AACCAATTCACCATTTTTCC+AGG | + | chr1_4:39916075-39916094 | Msa0162660:CDS | 35.0% |
| TACCTGGAAAAATGGTGAAT+TGG | - | chr1_4:39916080-39916099 | None:intergenic | 35.0% | |
| AAGAAAATGTTTGAATGGCC+AGG | - | chr1_4:39916264-39916283 | None:intergenic | 35.0% | |
| ! | GATAAGGTTGCTTGATGATT+CGG | - | chr1_4:39916319-39916338 | None:intergenic | 35.0% |
| GGTTAAAACCTAGCTCAAAA+CGG | - | chr1_4:39916375-39916394 | None:intergenic | 35.0% | |
| TGTTAAGATTTACCATAGGC+TGG | - | chr1_4:39916396-39916415 | None:intergenic | 35.0% | |
| ! | TATTTTGCACAGATCTAGCA+TGG | - | chr1_4:39916501-39916520 | None:intergenic | 35.0% |
| AACTTATGGACCTCAAATCT+CGG | + | chr1_4:39916554-39916573 | Msa0162660:CDS | 35.0% | |
| ! | ATCTCGGTTTGTATTTACCT+CGG | + | chr1_4:39916570-39916589 | Msa0162660:intron | 35.0% |
| AATGATTAAGAAAAGAGCCG+AGG | - | chr1_4:39916590-39916609 | None:intergenic | 35.0% | |
| ATCTGCAGCAGATAAACAAA+TGG | - | chr1_4:39916996-39917015 | None:intergenic | 35.0% | |
| !! | TTTATTCTGAAGCACAGCTT+TGG | - | chr1_4:39917166-39917185 | None:intergenic | 35.0% |
| AGTGAAGAGAACATAAACAC+TGG | + | chr1_4:39917421-39917440 | Msa0162660:CDS | 35.0% | |
| AACCTCAGATTGTAAGACTT+CGG | - | chr1_4:39917482-39917501 | None:intergenic | 35.0% | |
| AATTCGTCAAAGGAGACAAA+CGG | + | chr1_4:39917511-39917530 | Msa0162660:CDS | 35.0% | |
| GTATTGTCATGCCAACAAAA+TGG | + | chr1_4:39917662-39917681 | Msa0162660:CDS | 35.0% | |
| AAAACTGTCCAACAGAATTG+TGG | - | chr1_4:39915876-39915895 | None:intergenic | 35.0% | |
| ! | ATAAACAGGTTGAGATCCAT+AGG | - | chr1_4:39915932-39915951 | None:intergenic | 35.0% |
| TATGGATCTCAACCTGTTTA+TGG | + | chr1_4:39915931-39915950 | Msa0162660:CDS | 35.0% | |
| ! | TTGGAAAGCTCTAGTGAAAA+AGG | - | chr1_4:39915982-39916001 | None:intergenic | 35.0% |
| AGCAATTTGGTCTATGTAGT+TGG | - | chr1_4:39916001-39916020 | None:intergenic | 35.0% | |
| !! | AACCAATTCACCATTTTTCC+AGG | + | chr1_4:39916075-39916094 | Msa0162660:CDS | 35.0% |
| TACCTGGAAAAATGGTGAAT+TGG | - | chr1_4:39916080-39916099 | None:intergenic | 35.0% | |
| AAGAAAATGTTTGAATGGCC+AGG | - | chr1_4:39916264-39916283 | None:intergenic | 35.0% | |
| ! | GATAAGGTTGCTTGATGATT+CGG | - | chr1_4:39916319-39916338 | None:intergenic | 35.0% |
| GGTTAAAACCTAGCTCAAAA+CGG | - | chr1_4:39916375-39916394 | None:intergenic | 35.0% | |
| TGTTAAGATTTACCATAGGC+TGG | - | chr1_4:39916396-39916415 | None:intergenic | 35.0% | |
| ! | TATTTTGCACAGATCTAGCA+TGG | - | chr1_4:39916501-39916520 | None:intergenic | 35.0% |
| AACTTATGGACCTCAAATCT+CGG | + | chr1_4:39916554-39916573 | Msa0162660:CDS | 35.0% | |
| ! | ATCTCGGTTTGTATTTACCT+CGG | + | chr1_4:39916570-39916589 | Msa0162660:intron | 35.0% |
| AATGATTAAGAAAAGAGCCG+AGG | - | chr1_4:39916590-39916609 | None:intergenic | 35.0% | |
| ATCTGCAGCAGATAAACAAA+TGG | - | chr1_4:39916996-39917015 | None:intergenic | 35.0% | |
| !! | TTTATTCTGAAGCACAGCTT+TGG | - | chr1_4:39917166-39917185 | None:intergenic | 35.0% |
| AGTGAAGAGAACATAAACAC+TGG | + | chr1_4:39917421-39917440 | Msa0162660:CDS | 35.0% | |
| AACCTCAGATTGTAAGACTT+CGG | - | chr1_4:39917482-39917501 | None:intergenic | 35.0% | |
| AATTCGTCAAAGGAGACAAA+CGG | + | chr1_4:39917511-39917530 | Msa0162660:CDS | 35.0% | |
| GTATTGTCATGCCAACAAAA+TGG | + | chr1_4:39917662-39917681 | Msa0162660:CDS | 35.0% | |
| GGAAATGTCCACAATTCTGT+TGG | + | chr1_4:39915865-39915884 | Msa0162660:CDS | 40.0% | |
| AGTTCTTACTCGGAGCAATT+TGG | - | chr1_4:39916014-39916033 | None:intergenic | 40.0% | |
| CCTCGAACTAAGTTCTTACT+CGG | - | chr1_4:39916024-39916043 | None:intergenic | 40.0% | |
| !! | AAGTTGGTTCTGGCTAAACA+TGG | + | chr1_4:39916146-39916165 | Msa0162660:intron | 40.0% |
| ! | CTTTTGAACTTTCCTATGCC+TGG | + | chr1_4:39916243-39916262 | Msa0162660:intron | 40.0% |
| TCATCAGATGTCATGCTAAG+TGG | - | chr1_4:39917081-39917100 | None:intergenic | 40.0% | |
| CTTAGCATGACATCTGATGA+CGG | + | chr1_4:39917081-39917100 | Msa0162660:CDS | 40.0% | |
| TGCTTAGCATTCACGTATGT+TGG | - | chr1_4:39917108-39917127 | None:intergenic | 40.0% | |
| GTGAATGCTAAGCAATACCA+TGG | + | chr1_4:39917114-39917133 | Msa0162660:CDS | 40.0% | |
| TCTGCTAATGGAAACGGTAA+AGG | + | chr1_4:39917394-39917413 | Msa0162660:CDS | 40.0% | |
| GAAGAGAACATAAACACTGG+TGG | + | chr1_4:39917424-39917443 | Msa0162660:CDS | 40.0% | |
| TTCCGAAGTCTTACAATCTG+AGG | + | chr1_4:39917477-39917496 | Msa0162660:CDS | 40.0% | |
| ! | GAAGTCTTACAATCTGAGGT+TGG | + | chr1_4:39917481-39917500 | Msa0162660:CDS | 40.0% |
| GTGACTAGCATGTATTCACA+GGG | + | chr1_4:39917562-39917581 | Msa0162660:CDS | 40.0% | |
| GGAAATGTCCACAATTCTGT+TGG | + | chr1_4:39915865-39915884 | Msa0162660:CDS | 40.0% | |
| AGTTCTTACTCGGAGCAATT+TGG | - | chr1_4:39916014-39916033 | None:intergenic | 40.0% | |
| CCTCGAACTAAGTTCTTACT+CGG | - | chr1_4:39916024-39916043 | None:intergenic | 40.0% | |
| !! | AAGTTGGTTCTGGCTAAACA+TGG | + | chr1_4:39916146-39916165 | Msa0162660:intron | 40.0% |
| ! | CTTTTGAACTTTCCTATGCC+TGG | + | chr1_4:39916243-39916262 | Msa0162660:intron | 40.0% |
| TCATCAGATGTCATGCTAAG+TGG | - | chr1_4:39917081-39917100 | None:intergenic | 40.0% | |
| CTTAGCATGACATCTGATGA+CGG | + | chr1_4:39917081-39917100 | Msa0162660:CDS | 40.0% | |
| TGCTTAGCATTCACGTATGT+TGG | - | chr1_4:39917108-39917127 | None:intergenic | 40.0% | |
| GTGAATGCTAAGCAATACCA+TGG | + | chr1_4:39917114-39917133 | Msa0162660:CDS | 40.0% | |
| TCTGCTAATGGAAACGGTAA+AGG | + | chr1_4:39917394-39917413 | Msa0162660:CDS | 40.0% | |
| GAAGAGAACATAAACACTGG+TGG | + | chr1_4:39917424-39917443 | Msa0162660:CDS | 40.0% | |
| TTCCGAAGTCTTACAATCTG+AGG | + | chr1_4:39917477-39917496 | Msa0162660:CDS | 40.0% | |
| ! | GAAGTCTTACAATCTGAGGT+TGG | + | chr1_4:39917481-39917500 | Msa0162660:CDS | 40.0% |
| GTGACTAGCATGTATTCACA+GGG | + | chr1_4:39917562-39917581 | Msa0162660:CDS | 40.0% | |
| GGATCTCAACCTGTTTATGG+CGG | + | chr1_4:39915934-39915953 | Msa0162660:CDS | 45.0% | |
| CCGAGTAAGAACTTAGTTCG+AGG | + | chr1_4:39916021-39916040 | Msa0162660:CDS | 45.0% | |
| ATGTTTGAATGGCCAGGCAT+AGG | - | chr1_4:39916258-39916277 | None:intergenic | 45.0% | |
| CCTAGCTCAAAACGGTTAAG+TGG | - | chr1_4:39916367-39916386 | None:intergenic | 45.0% | |
| !! | CCACTTAACCGTTTTGAGCT+AGG | + | chr1_4:39916364-39916383 | Msa0162660:CDS | 45.0% |
| !! | GCTAGGTTTTAACCAGCCTA+TGG | + | chr1_4:39916381-39916400 | Msa0162660:CDS | 45.0% |
| TGCACAGATCTAGCATGGAA+AGG | - | chr1_4:39916496-39916515 | None:intergenic | 45.0% | |
| TACGGGCTCTTCTCAACTTA+TGG | + | chr1_4:39916540-39916559 | Msa0162660:CDS | 45.0% | |
| TGACGCGATTCGTGCATATA+TGG | - | chr1_4:39917316-39917335 | None:intergenic | 45.0% | |
| GCTAATGGAAACGGTAAAGG+CGG | + | chr1_4:39917397-39917416 | Msa0162660:CDS | 45.0% | |
| CTAATGGAAACGGTAAAGGC+GGG | + | chr1_4:39917398-39917417 | Msa0162660:CDS | 45.0% | |
| GGTGACTAGCATGTATTCAC+AGG | + | chr1_4:39917561-39917580 | Msa0162660:CDS | 45.0% | |
| ACTAGCATGTATTCACAGGG+AGG | + | chr1_4:39917565-39917584 | Msa0162660:CDS | 45.0% | |
| GGATCTACTGTCCACTCTTT+GGG | + | chr1_4:39917616-39917635 | Msa0162660:CDS | 45.0% | |
| TTGGGAGACATGATCGATAC+TGG | + | chr1_4:39917634-39917653 | Msa0162660:CDS | 45.0% | |
| GACATGATCGATACTGGACA+CGG | + | chr1_4:39917640-39917659 | Msa0162660:CDS | 45.0% | |
| ! | GCTGCTGCAAACCATTTTGT+TGG | - | chr1_4:39917676-39917695 | None:intergenic | 45.0% |
| ! | ACAAAATGGTTTGCAGCAGC+TGG | + | chr1_4:39917676-39917695 | Msa0162660:CDS | 45.0% |
| GGATCTCAACCTGTTTATGG+CGG | + | chr1_4:39915934-39915953 | Msa0162660:CDS | 45.0% | |
| CCGAGTAAGAACTTAGTTCG+AGG | + | chr1_4:39916021-39916040 | Msa0162660:CDS | 45.0% | |
| ATGTTTGAATGGCCAGGCAT+AGG | - | chr1_4:39916258-39916277 | None:intergenic | 45.0% | |
| CCTAGCTCAAAACGGTTAAG+TGG | - | chr1_4:39916367-39916386 | None:intergenic | 45.0% | |
| !! | CCACTTAACCGTTTTGAGCT+AGG | + | chr1_4:39916364-39916383 | Msa0162660:CDS | 45.0% |
| !! | GCTAGGTTTTAACCAGCCTA+TGG | + | chr1_4:39916381-39916400 | Msa0162660:CDS | 45.0% |
| TGCACAGATCTAGCATGGAA+AGG | - | chr1_4:39916496-39916515 | None:intergenic | 45.0% | |
| TACGGGCTCTTCTCAACTTA+TGG | + | chr1_4:39916540-39916559 | Msa0162660:CDS | 45.0% | |
| TGACGCGATTCGTGCATATA+TGG | - | chr1_4:39917316-39917335 | None:intergenic | 45.0% | |
| GCTAATGGAAACGGTAAAGG+CGG | + | chr1_4:39917397-39917416 | Msa0162660:CDS | 45.0% | |
| CTAATGGAAACGGTAAAGGC+GGG | + | chr1_4:39917398-39917417 | Msa0162660:CDS | 45.0% | |
| GGTGACTAGCATGTATTCAC+AGG | + | chr1_4:39917561-39917580 | Msa0162660:CDS | 45.0% | |
| ACTAGCATGTATTCACAGGG+AGG | + | chr1_4:39917565-39917584 | Msa0162660:CDS | 45.0% | |
| GGATCTACTGTCCACTCTTT+GGG | + | chr1_4:39917616-39917635 | Msa0162660:CDS | 45.0% | |
| TTGGGAGACATGATCGATAC+TGG | + | chr1_4:39917634-39917653 | Msa0162660:CDS | 45.0% | |
| GACATGATCGATACTGGACA+CGG | + | chr1_4:39917640-39917659 | Msa0162660:CDS | 45.0% | |
| ! | GCTGCTGCAAACCATTTTGT+TGG | - | chr1_4:39917676-39917695 | None:intergenic | 45.0% |
| ! | ACAAAATGGTTTGCAGCAGC+TGG | + | chr1_4:39917676-39917695 | Msa0162660:CDS | 45.0% |
| !! | ATGAAATAAAAAAAAAATTA+TGG | + | chr1_4:39916813-39916832 | Msa0162660:intron | 5.0% |
| !! | TATCTATATTTAATAAATTA+GGG | + | chr1_4:39917042-39917061 | Msa0162660:intron | 5.0% |
| !! | ATGAAATAAAAAAAAAATTA+TGG | + | chr1_4:39916813-39916832 | Msa0162660:intron | 5.0% |
| !! | TATCTATATTTAATAAATTA+GGG | + | chr1_4:39917042-39917061 | Msa0162660:intron | 5.0% |
| CATCTGTGACTTCAGCTCCA+TGG | + | chr1_4:39915896-39915915 | Msa0162660:CDS | 50.0% | |
| CCATAGGCATTACTCCACCA+TGG | - | chr1_4:39915916-39915935 | None:intergenic | 50.0% | |
| ! | CCATGGTGGAGTAATGCCTA+TGG | + | chr1_4:39915913-39915932 | Msa0162660:CDS | 50.0% |
| CAAGACTCTCCGCCATAAAC+AGG | - | chr1_4:39915946-39915965 | None:intergenic | 50.0% | |
| ! | GTTTATGGCGGAGAGTCTTG+TGG | + | chr1_4:39915946-39915965 | Msa0162660:CDS | 50.0% |
| GTCTGCGTCTGATGATACCA+TGG | - | chr1_4:39917134-39917153 | None:intergenic | 50.0% | |
| CATGCAATGCGTAGACCAAG+AGG | + | chr1_4:39917340-39917359 | Msa0162660:CDS | 50.0% | |
| ATGCGTAGACCAAGAGGATG+CGG | + | chr1_4:39917346-39917365 | Msa0162660:CDS | 50.0% | |
| ! | TTCGGAACTCTGAGAACCAC+TGG | - | chr1_4:39917464-39917483 | None:intergenic | 50.0% |
| TCGTCAAAGGAGACAAACGG+AGG | + | chr1_4:39917514-39917533 | Msa0162660:CDS | 50.0% | |
| CGGATCTACTGTCCACTCTT+TGG | + | chr1_4:39917615-39917634 | Msa0162660:CDS | 50.0% | |
| CGATCATGTCTCCCAAAGAG+TGG | - | chr1_4:39917630-39917649 | None:intergenic | 50.0% | |
| CATCTGTGACTTCAGCTCCA+TGG | + | chr1_4:39915896-39915915 | Msa0162660:CDS | 50.0% | |
| CCATAGGCATTACTCCACCA+TGG | - | chr1_4:39915916-39915935 | None:intergenic | 50.0% | |
| ! | CCATGGTGGAGTAATGCCTA+TGG | + | chr1_4:39915913-39915932 | Msa0162660:CDS | 50.0% |
| CAAGACTCTCCGCCATAAAC+AGG | - | chr1_4:39915946-39915965 | None:intergenic | 50.0% | |
| ! | GTTTATGGCGGAGAGTCTTG+TGG | + | chr1_4:39915946-39915965 | Msa0162660:CDS | 50.0% |
| GTCTGCGTCTGATGATACCA+TGG | - | chr1_4:39917134-39917153 | None:intergenic | 50.0% | |
| CATGCAATGCGTAGACCAAG+AGG | + | chr1_4:39917340-39917359 | Msa0162660:CDS | 50.0% | |
| ATGCGTAGACCAAGAGGATG+CGG | + | chr1_4:39917346-39917365 | Msa0162660:CDS | 50.0% | |
| ! | TTCGGAACTCTGAGAACCAC+TGG | - | chr1_4:39917464-39917483 | None:intergenic | 50.0% |
| TCGTCAAAGGAGACAAACGG+AGG | + | chr1_4:39917514-39917533 | Msa0162660:CDS | 50.0% | |
| CGGATCTACTGTCCACTCTT+TGG | + | chr1_4:39917615-39917634 | Msa0162660:CDS | 50.0% | |
| CGATCATGTCTCCCAAAGAG+TGG | - | chr1_4:39917630-39917649 | None:intergenic | 50.0% | |
| CTGTGACTTCAGCTCCATGG+TGG | + | chr1_4:39915899-39915918 | Msa0162660:CDS | 55.0% | |
| AAACGACCACCGCATCCTCT+TGG | - | chr1_4:39917358-39917377 | None:intergenic | 55.0% | |
| AACCACTGGACTGCAGCTGT+AGG | - | chr1_4:39917450-39917469 | None:intergenic | 55.0% | |
| CTGTGACTTCAGCTCCATGG+TGG | + | chr1_4:39915899-39915918 | Msa0162660:CDS | 55.0% | |
| AAACGACCACCGCATCCTCT+TGG | - | chr1_4:39917358-39917377 | None:intergenic | 55.0% | |
| AACCACTGGACTGCAGCTGT+AGG | - | chr1_4:39917450-39917469 | None:intergenic | 55.0% | |
| CGTAGACCAAGAGGATGCGG+TGG | + | chr1_4:39917349-39917368 | Msa0162660:CDS | 60.0% | |
| CGGAGGCAGTCCAAACGTCT+CGG | + | chr1_4:39917531-39917550 | Msa0162660:CDS | 60.0% | |
| GGAGGCAGTCCAAACGTCTC+GGG | + | chr1_4:39917532-39917551 | Msa0162660:CDS | 60.0% | |
| GAGGCAGTCCAAACGTCTCG+GGG | + | chr1_4:39917533-39917552 | Msa0162660:CDS | 60.0% | |
| TCCAAACGTCTCGGGGTCAG+AGG | + | chr1_4:39917540-39917559 | Msa0162660:CDS | 60.0% | |
| ACCTCTGACCCCGAGACGTT+TGG | - | chr1_4:39917544-39917563 | None:intergenic | 60.0% | |
| AGCAGCTGGTAGACAGCTGC+TGG | + | chr1_4:39917690-39917709 | Msa0162660:CDS | 60.0% | |
| CGTAGACCAAGAGGATGCGG+TGG | + | chr1_4:39917349-39917368 | Msa0162660:CDS | 60.0% | |
| CGGAGGCAGTCCAAACGTCT+CGG | + | chr1_4:39917531-39917550 | Msa0162660:CDS | 60.0% | |
| GGAGGCAGTCCAAACGTCTC+GGG | + | chr1_4:39917532-39917551 | Msa0162660:CDS | 60.0% | |
| GAGGCAGTCCAAACGTCTCG+GGG | + | chr1_4:39917533-39917552 | Msa0162660:CDS | 60.0% | |
| TCCAAACGTCTCGGGGTCAG+AGG | + | chr1_4:39917540-39917559 | Msa0162660:CDS | 60.0% | |
| ACCTCTGACCCCGAGACGTT+TGG | - | chr1_4:39917544-39917563 | None:intergenic | 60.0% | |
| AGCAGCTGGTAGACAGCTGC+TGG | + | chr1_4:39917690-39917709 | Msa0162660:CDS | 60.0% | |
| GGCCTACAGCTGCAGTCCAG+TGG | + | chr1_4:39917445-39917464 | Msa0162660:CDS | 65.0% | |
| GGCCTACAGCTGCAGTCCAG+TGG | + | chr1_4:39917445-39917464 | Msa0162660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 39915829 | 39917720 | 39915829 | ID=Msa0162660;Name=Msa0162660 |
| chr1_4 | mRNA | 39915829 | 39917720 | 39915829 | ID=Msa0162660-mRNA-1;Parent=Msa0162660;Name=Msa0162660-mRNA-1;_AED=0.05;_eAED=0.07;_QI=0|0|0|1|1|1|5|0|332 |
| chr1_4 | exon | 39915829 | 39916096 | 39915829 | ID=Msa0162660-mRNA-1:exon:11539;Parent=Msa0162660-mRNA-1 |
| chr1_4 | exon | 39916290 | 39916402 | 39916290 | ID=Msa0162660-mRNA-1:exon:11540;Parent=Msa0162660-mRNA-1 |
| chr1_4 | exon | 39916507 | 39916575 | 39916507 | ID=Msa0162660-mRNA-1:exon:11541;Parent=Msa0162660-mRNA-1 |
| chr1_4 | exon | 39917063 | 39917203 | 39917063 | ID=Msa0162660-mRNA-1:exon:11542;Parent=Msa0162660-mRNA-1 |
| chr1_4 | exon | 39917313 | 39917720 | 39917313 | ID=Msa0162660-mRNA-1:exon:11543;Parent=Msa0162660-mRNA-1 |
| chr1_4 | CDS | 39915829 | 39916096 | 39915829 | ID=Msa0162660-mRNA-1:cds;Parent=Msa0162660-mRNA-1 |
| chr1_4 | CDS | 39916290 | 39916402 | 39916290 | ID=Msa0162660-mRNA-1:cds;Parent=Msa0162660-mRNA-1 |
| chr1_4 | CDS | 39916507 | 39916575 | 39916507 | ID=Msa0162660-mRNA-1:cds;Parent=Msa0162660-mRNA-1 |
| chr1_4 | CDS | 39917063 | 39917203 | 39917063 | ID=Msa0162660-mRNA-1:cds;Parent=Msa0162660-mRNA-1 |
| chr1_4 | CDS | 39917313 | 39917720 | 39917313 | ID=Msa0162660-mRNA-1:cds;Parent=Msa0162660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
