Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163160 | sp|Q8GW29|LOG7_ARATH | 68.692 | 214 | 36 | 5 | 1 | 183 | 1 | 214 | 8.04e-93 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163160 | A0A072VJY2 | 79.343 | 213 | 15 | 1 | 1 | 184 | 1 | 213 | 4.54e-109 | 320 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024030 | Msa0163160 | 0.812114 | 4.988488e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163160 | MtrunA17_Chr1g0177391 | 79.343 | 213 | 15 | 1 | 1 | 184 | 1 | 213 | 8.75e-113 | 320 |
| Msa0163160 | MtrunA17_Chr7g0264181 | 58.373 | 209 | 56 | 5 | 6 | 183 | 11 | 219 | 3.11e-77 | 230 |
| Msa0163160 | MtrunA17_Chr2g0326841 | 57.653 | 196 | 54 | 1 | 6 | 172 | 10 | 205 | 5.56e-77 | 229 |
| Msa0163160 | MtrunA17_Chr1g0181131 | 57.416 | 209 | 58 | 5 | 6 | 183 | 10 | 218 | 2.37e-76 | 228 |
| Msa0163160 | MtrunA17_Chr3g0142491 | 55.502 | 209 | 64 | 1 | 5 | 184 | 11 | 219 | 3.10e-74 | 222 |
| Msa0163160 | MtrunA17_Chr4g0028871 | 59.067 | 193 | 50 | 4 | 8 | 171 | 12 | 204 | 3.60e-73 | 219 |
| Msa0163160 | MtrunA17_Chr1g0151201 | 47.907 | 215 | 80 | 3 | 1 | 183 | 1 | 215 | 1.37e-62 | 192 |
| Msa0163160 | MtrunA17_Chr1g0156401 | 79.487 | 78 | 16 | 0 | 36 | 113 | 1 | 78 | 3.17e-41 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163160 | AT5G06300.1 | 68.692 | 214 | 36 | 5 | 1 | 183 | 1 | 214 | 8.17e-94 | 272 |
| Msa0163160 | AT2G35990.1 | 61.275 | 204 | 50 | 4 | 1 | 175 | 1 | 204 | 3.26e-82 | 243 |
| Msa0163160 | AT2G37210.1 | 59.512 | 205 | 53 | 5 | 5 | 179 | 10 | 214 | 3.15e-78 | 233 |
| Msa0163160 | AT3G53450.1 | 59.512 | 205 | 53 | 5 | 5 | 179 | 10 | 214 | 2.00e-77 | 231 |
| Msa0163160 | AT2G28305.1 | 56.398 | 211 | 62 | 5 | 3 | 183 | 2 | 212 | 2.47e-76 | 228 |
| Msa0163160 | AT2G37210.2 | 51.965 | 229 | 56 | 4 | 5 | 179 | 10 | 238 | 1.09e-73 | 222 |
| Msa0163160 | AT2G28305.3 | 60.440 | 182 | 43 | 4 | 3 | 155 | 2 | 183 | 1.00e-70 | 213 |
| Msa0163160 | AT5G03270.1 | 56.216 | 185 | 52 | 1 | 6 | 161 | 16 | 200 | 2.19e-67 | 204 |
| Msa0163160 | AT4G35190.1 | 53.500 | 200 | 64 | 3 | 1 | 171 | 1 | 200 | 8.81e-67 | 204 |
| Msa0163160 | AT5G03270.2 | 56.831 | 183 | 50 | 4 | 2 | 155 | 12 | 194 | 3.23e-64 | 196 |
| Msa0163160 | AT4G35190.2 | 55.435 | 184 | 53 | 3 | 1 | 155 | 1 | 184 | 1.89e-63 | 194 |
| Msa0163160 | AT2G28305.2 | 74.107 | 112 | 29 | 0 | 3 | 114 | 2 | 113 | 3.66e-61 | 187 |
| Msa0163160 | AT5G11950.1 | 46.190 | 210 | 83 | 2 | 2 | 181 | 3 | 212 | 2.10e-60 | 187 |
| Msa0163160 | AT5G11950.2 | 46.190 | 210 | 83 | 2 | 2 | 181 | 3 | 212 | 2.10e-60 | 187 |
| Msa0163160 | AT5G11950.3 | 46.190 | 210 | 83 | 2 | 2 | 181 | 3 | 212 | 2.10e-60 | 187 |
| Msa0163160 | AT2G35990.3 | 55.921 | 152 | 38 | 4 | 53 | 175 | 1 | 152 | 1.86e-48 | 155 |
| Msa0163160 | AT2G35990.2 | 55.921 | 152 | 38 | 4 | 53 | 175 | 1 | 152 | 1.86e-48 | 155 |
| Msa0163160 | AT5G11950.4 | 42.767 | 159 | 61 | 2 | 53 | 181 | 1 | 159 | 2.58e-34 | 119 |
Find 64 sgRNAs with CRISPR-Local
Find 980 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGGATTGATTTGGTTTA+TGG | 0.101186 | 1_4:+41101296 | Msa0163160:CDS |
| GTCTACTGTGGTAGCAGTTC+AGG | 0.251931 | 1_4:+41100357 | Msa0163160:CDS |
| CTAGTTCAACAGCAGCTTCT+TGG | 0.259502 | 1_4:-41100395 | None:intergenic |
| AATCCTCTTAAACTTTGATT+TGG | 0.295009 | 1_4:-41100331 | None:intergenic |
| GATGCCTTCATTGCCCTTCC+TGG | 0.296660 | 1_4:+41102564 | Msa0163160:CDS |
| AGATAACTGGTGACCCTATT+GGG | 0.297013 | 1_4:+41102484 | Msa0163160:intron |
| ACGATAATGCGACGTGCCTT+TGG | 0.334696 | 1_4:-41104413 | None:intergenic |
| GATGGTGGACGCCATGTTCT+TGG | 0.338445 | 1_4:+41101365 | Msa0163160:CDS |
| GGAATTGGTTAGGGGATTAG+AGG | 0.346976 | 1_4:+41104454 | Msa0163160:CDS |
| CAGATAACTGGTGACCCTAT+TGG | 0.351597 | 1_4:+41102483 | Msa0163160:intron |
| TCACATGGCAACTTCTGATT+CGG | 0.371578 | 1_4:-41104743 | None:intergenic |
| AAACCAAATCAAAGTTTAAG+AGG | 0.371717 | 1_4:+41100328 | Msa0163160:CDS |
| CGATAATGCGACGTGCCTTT+GGG | 0.375378 | 1_4:-41104412 | None:intergenic |
| ACTCAATGGTTTACCTCTCT+TGG | 0.379537 | 1_4:-41102352 | None:intergenic |
| GGTTGAGAGAAGGATTGATT+TGG | 0.380510 | 1_4:+41101289 | Msa0163160:intron |
| ACAGCTCTCACTTCCCCAAT+AGG | 0.386608 | 1_4:-41102498 | None:intergenic |
| AGGTGGTAGTGTGGGTCTGA+TGG | 0.405577 | 1_4:+41101319 | Msa0163160:CDS |
| GGTGGTAGTGTGGGTCTGAT+GGG | 0.415803 | 1_4:+41101320 | Msa0163160:CDS |
| GTTTATGGAGGTGGTAGTGT+GGG | 0.418025 | 1_4:+41101311 | Msa0163160:CDS |
| CCACAGCCAAGGAATTGGTT+AGG | 0.425578 | 1_4:+41104444 | Msa0163160:CDS |
| GCATCAAAGGAAAGCTGAAA+TGG | 0.425795 | 1_4:+41102530 | Msa0163160:CDS |
| ACAGCAGCTTCTTGGTAAGT+AGG | 0.426650 | 1_4:-41100387 | None:intergenic |
| CACATGGCAACTTCTGATTC+GGG | 0.432879 | 1_4:-41104742 | None:intergenic |
| ATTGATTTGGTTTATGGAGG+TGG | 0.437781 | 1_4:+41101302 | Msa0163160:CDS |
| AGCATCCACAGCCAAGGAAT+TGG | 0.439181 | 1_4:+41104439 | Msa0163160:CDS |
| CACAGCCAAGGAATTGGTTA+GGG | 0.451858 | 1_4:+41104445 | Msa0163160:CDS |
| TCTCTTGGCATGAGACTCCT+AGG | 0.453788 | 1_4:-41102337 | None:intergenic |
| GAAAGCTGAAATGGCTAGGC+AGG | 0.460252 | 1_4:+41102539 | Msa0163160:CDS |
| GTTTATGCAGTGTTATCCCT+AGG | 0.460934 | 1_4:+41102320 | Msa0163160:intron |
| GGTTTATGGAGGTGGTAGTG+TGG | 0.474379 | 1_4:+41101310 | Msa0163160:CDS |
| ATGGTGGACGCCATGTTCTT+GGG | 0.476714 | 1_4:+41101366 | Msa0163160:CDS |
| GATACATATTCATCTTGCTC+AGG | 0.480241 | 1_4:-41104685 | None:intergenic |
| ATTGACAAGGCCGTTGATGA+AGG | 0.480397 | 1_4:+41104380 | Msa0163160:intron |
| CAGCTCTCACTTCCCCAATA+GGG | 0.481416 | 1_4:-41102497 | None:intergenic |
| TCTTTCTTCCCACACCAACT+TGG | 0.497589 | 1_4:-41104707 | None:intergenic |
| AGGATTGATTTGGTTTATGG+AGG | 0.498565 | 1_4:+41101299 | Msa0163160:CDS |
| TGGTCGAAAATGCAGATAAC+TGG | 0.500494 | 1_4:+41102471 | Msa0163160:intron |
| CATACCAGGAAGGGCAATGA+AGG | 0.504465 | 1_4:-41102568 | None:intergenic |
| CAATGTTGAAGGTTGAGAGA+AGG | 0.514544 | 1_4:+41101279 | Msa0163160:intron |
| TGTTGAACTAGCAAAAGAAA+TGG | 0.525403 | 1_4:+41100407 | Msa0163160:CDS |
| CCTAACCAATTCCTTGGCTG+TGG | 0.525618 | 1_4:-41104444 | None:intergenic |
| TCTACTGTGGTAGCAGTTCA+GGG | 0.526335 | 1_4:+41100358 | Msa0163160:CDS |
| GTTTCTCAAGCAGTTCATGA+TGG | 0.532994 | 1_4:+41101347 | Msa0163160:CDS |
| TAATCCCCTAACCAATTCCT+TGG | 0.543230 | 1_4:-41104450 | None:intergenic |
| CTGTATCTGATATGCATCAA+AGG | 0.557918 | 1_4:+41102517 | Msa0163160:CDS |
| AAAGGAAAGCTGAAATGGCT+AGG | 0.576735 | 1_4:+41102535 | Msa0163160:CDS |
| TGAAGGCTTTATTTCCCCAA+AGG | 0.581047 | 1_4:+41104397 | Msa0163160:CDS |
| GTGGGTCTATTGAATGTGGA+TGG | 0.585448 | 1_4:+41104332 | Msa0163160:CDS |
| GGAAATAAAGCCTTCATCAA+CGG | 0.588345 | 1_4:-41104390 | None:intergenic |
| CCAAGATTTCATACCAGGAA+GGG | 0.596878 | 1_4:-41102577 | None:intergenic |
| GATAATGCGACGTGCCTTTG+GGG | 0.597193 | 1_4:-41104411 | None:intergenic |
| CGTGTCAGCATCCACAGCCA+AGG | 0.598380 | 1_4:+41104433 | Msa0163160:CDS |
| TCTCAAGCAGTTCATGATGG+TGG | 0.600423 | 1_4:+41101350 | Msa0163160:CDS |
| GCCAAGATTTCATACCAGGA+AGG | 0.602177 | 1_4:-41102578 | None:intergenic |
| GCAGGTGGGTCTATTGAATG+TGG | 0.607073 | 1_4:+41104328 | Msa0163160:intron |
| AGATGAATATGTATCCAAGT+TGG | 0.616544 | 1_4:+41104693 | Msa0163160:CDS |
| AAGAAACTAACCCAAGAACA+TGG | 0.618263 | 1_4:-41101376 | None:intergenic |
| GATAACTGGTGACCCTATTG+GGG | 0.618479 | 1_4:+41102485 | Msa0163160:intron |
| AATATGTATCCAAGTTGGTG+TGG | 0.623210 | 1_4:+41104698 | Msa0163160:CDS |
| ACAGCCAAGGAATTGGTTAG+GGG | 0.625582 | 1_4:+41104446 | Msa0163160:CDS |
| CTCTTGGCATGAGACTCCTA+GGG | 0.627464 | 1_4:-41102336 | None:intergenic |
| AAGAGGATTTGTGTCTACTG+TGG | 0.635693 | 1_4:+41100345 | Msa0163160:CDS |
| TAGGAGTCTCATGCCAAGAG+AGG | 0.642075 | 1_4:+41102339 | Msa0163160:CDS |
| ATATGTATCCAAGTTGGTGT+GGG | 0.680600 | 1_4:+41104699 | Msa0163160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAT+AGG | - | chr1_4:41101053-41101072 | None:intergenic | 0.0% |
| !!! | AAATAAAATTAAAAAATTTT+GGG | - | chr1_4:41101080-41101099 | None:intergenic | 0.0% |
| !!! | AAAATAAAATTAAAAAATTT+TGG | - | chr1_4:41101081-41101100 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAT+AGG | - | chr1_4:41101053-41101072 | None:intergenic | 0.0% |
| !!! | AAATAAAATTAAAAAATTTT+GGG | - | chr1_4:41101080-41101099 | None:intergenic | 0.0% |
| !!! | AAAATAAAATTAAAAAATTT+TGG | - | chr1_4:41101081-41101100 | None:intergenic | 0.0% |
| !! | GAAAAAATAAAAATAAACAA+AGG | - | chr1_4:41100677-41100696 | None:intergenic | 10.0% |
| !!! | TTAAATTTTACTTGTATTTT+AGG | - | chr1_4:41103078-41103097 | None:intergenic | 10.0% |
| !!! | ATATGTTTTAGTTTTTTTTT+TGG | + | chr1_4:41103662-41103681 | Msa0163160:intron | 10.0% |
| !!! | TATGTTTTAGTTTTTTTTTT+GGG | + | chr1_4:41103663-41103682 | Msa0163160:intron | 10.0% |
| !!! | TTGATTGTTTAATATTTTTA+TGG | + | chr1_4:41104304-41104323 | Msa0163160:intron | 10.0% |
| !!! | AAAAATTAGTTTTTCTTTTT+TGG | + | chr1_4:41104799-41104818 | Msa0163160:intron | 10.0% |
| !!! | AAAATTAGTTTTTCTTTTTT+GGG | + | chr1_4:41104800-41104819 | Msa0163160:intron | 10.0% |
| !! | GAAAAAATAAAAATAAACAA+AGG | - | chr1_4:41100677-41100696 | None:intergenic | 10.0% |
| !!! | TTAAATTTTACTTGTATTTT+AGG | - | chr1_4:41103078-41103097 | None:intergenic | 10.0% |
| !!! | ATATGTTTTAGTTTTTTTTT+TGG | + | chr1_4:41103662-41103681 | Msa0163160:intron | 10.0% |
| !!! | TATGTTTTAGTTTTTTTTTT+GGG | + | chr1_4:41103663-41103682 | Msa0163160:intron | 10.0% |
| !!! | TTGATTGTTTAATATTTTTA+TGG | + | chr1_4:41104304-41104323 | Msa0163160:intron | 10.0% |
| !!! | AAAAATTAGTTTTTCTTTTT+TGG | + | chr1_4:41104799-41104818 | Msa0163160:intron | 10.0% |
| !!! | AAAATTAGTTTTTCTTTTTT+GGG | + | chr1_4:41104800-41104819 | Msa0163160:intron | 10.0% |
| !!! | ATAAAGACATTTTTTTTGTA+AGG | - | chr1_4:41100517-41100536 | None:intergenic | 15.0% |
| !! | TTGAAATCATTAATTTCTTA+GGG | - | chr1_4:41101760-41101779 | None:intergenic | 15.0% |
| !! | ATTGAAATCATTAATTTCTT+AGG | - | chr1_4:41101761-41101780 | None:intergenic | 15.0% |
| !! | AAATTTACTATATACTAATG+TGG | + | chr1_4:41101902-41101921 | Msa0163160:intron | 15.0% |
| !!! | ATTGTTGAGTTTTTATATAA+AGG | + | chr1_4:41101945-41101964 | Msa0163160:intron | 15.0% |
| !!! | TTGTTGAGTTTTTATATAAA+GGG | + | chr1_4:41101946-41101965 | Msa0163160:intron | 15.0% |
| !!! | ACAAGACAAAAATATTTTAA+TGG | - | chr1_4:41102265-41102284 | None:intergenic | 15.0% |
| !! | TTTGTTAATAAAATATATGG+TGG | + | chr1_4:41102451-41102470 | Msa0163160:intron | 15.0% |
| !! | ATAAATAAAAAAGAGTAGTA+TGG | - | chr1_4:41103035-41103054 | None:intergenic | 15.0% |
| !!! | CTAGTTTGTTTAATTATAAA+AGG | - | chr1_4:41103391-41103410 | None:intergenic | 15.0% |
| !!! | ATTTTATAAAGTAGGATATT+AGG | - | chr1_4:41103458-41103477 | None:intergenic | 15.0% |
| !!! | TGATTCATATTTTATAAAGT+AGG | - | chr1_4:41103466-41103485 | None:intergenic | 15.0% |
| !! | ACATAAAATAGTCATATATA+TGG | + | chr1_4:41104868-41104887 | Msa0163160:intron | 15.0% |
| !! | CATAAAATAGTCATATATAT+GGG | + | chr1_4:41104869-41104888 | Msa0163160:intron | 15.0% |
| !! | GAAATAGAAATAAATAAGTT+AGG | - | chr1_4:41105067-41105086 | None:intergenic | 15.0% |
| !! | AATAATAGAAATATTAAGCT+AGG | - | chr1_4:41105131-41105150 | None:intergenic | 15.0% |
| !!! | TTTATTGTATTATTTGTTGA+AGG | - | chr1_4:41105179-41105198 | None:intergenic | 15.0% |
| !!! | TATTTTAAGATGAATTGTTT+CGG | + | chr1_4:41105226-41105245 | Msa0163160:intron | 15.0% |
| !!! | AAATAATTTGTAATAAGTGT+GGG | - | chr1_4:41107611-41107630 | None:intergenic | 15.0% |
| !!! | ATCCAAAAAATTTTAATAGT+GGG | - | chr1_4:41107829-41107848 | None:intergenic | 15.0% |
| !!! | ATAAAGACATTTTTTTTGTA+AGG | - | chr1_4:41100517-41100536 | None:intergenic | 15.0% |
| !! | TTGAAATCATTAATTTCTTA+GGG | - | chr1_4:41101760-41101779 | None:intergenic | 15.0% |
| !! | ATTGAAATCATTAATTTCTT+AGG | - | chr1_4:41101761-41101780 | None:intergenic | 15.0% |
| !! | AAATTTACTATATACTAATG+TGG | + | chr1_4:41101902-41101921 | Msa0163160:intron | 15.0% |
| !!! | ATTGTTGAGTTTTTATATAA+AGG | + | chr1_4:41101945-41101964 | Msa0163160:intron | 15.0% |
| !!! | TTGTTGAGTTTTTATATAAA+GGG | + | chr1_4:41101946-41101965 | Msa0163160:intron | 15.0% |
| !!! | ACAAGACAAAAATATTTTAA+TGG | - | chr1_4:41102265-41102284 | None:intergenic | 15.0% |
| !! | TTTGTTAATAAAATATATGG+TGG | + | chr1_4:41102451-41102470 | Msa0163160:intron | 15.0% |
| !! | ATAAATAAAAAAGAGTAGTA+TGG | - | chr1_4:41103035-41103054 | None:intergenic | 15.0% |
| !!! | CTAGTTTGTTTAATTATAAA+AGG | - | chr1_4:41103391-41103410 | None:intergenic | 15.0% |
| !!! | ATTTTATAAAGTAGGATATT+AGG | - | chr1_4:41103458-41103477 | None:intergenic | 15.0% |
| !!! | TGATTCATATTTTATAAAGT+AGG | - | chr1_4:41103466-41103485 | None:intergenic | 15.0% |
| !! | ACATAAAATAGTCATATATA+TGG | + | chr1_4:41104868-41104887 | Msa0163160:intron | 15.0% |
| !! | CATAAAATAGTCATATATAT+GGG | + | chr1_4:41104869-41104888 | Msa0163160:intron | 15.0% |
| !! | GAAATAGAAATAAATAAGTT+AGG | - | chr1_4:41105067-41105086 | None:intergenic | 15.0% |
| !! | AATAATAGAAATATTAAGCT+AGG | - | chr1_4:41105131-41105150 | None:intergenic | 15.0% |
| !!! | TTTATTGTATTATTTGTTGA+AGG | - | chr1_4:41105179-41105198 | None:intergenic | 15.0% |
| !!! | TATTTTAAGATGAATTGTTT+CGG | + | chr1_4:41105226-41105245 | Msa0163160:intron | 15.0% |
| !!! | AAATAATTTGTAATAAGTGT+GGG | - | chr1_4:41107611-41107630 | None:intergenic | 15.0% |
| !!! | ATCCAAAAAATTTTAATAGT+GGG | - | chr1_4:41107829-41107848 | None:intergenic | 15.0% |
| !! | ACAAAAAAAATATGAACATG+AGG | - | chr1_4:41100610-41100629 | None:intergenic | 20.0% |
| !!! | TCATGTTCATATTTTTTTTG+TGG | + | chr1_4:41100609-41100628 | Msa0163160:intron | 20.0% |
| !!! | TTTTATAAAGTTCCAAATCT+AGG | + | chr1_4:41100708-41100727 | Msa0163160:intron | 20.0% |
| !! | TAAAAATCATGAAAGATTGT+GGG | - | chr1_4:41101012-41101031 | None:intergenic | 20.0% |
| !! | ATAAAAATCATGAAAGATTG+TGG | - | chr1_4:41101013-41101032 | None:intergenic | 20.0% |
| !!! | ATAGAGATTGATTGATTTAT+TGG | - | chr1_4:41101117-41101136 | None:intergenic | 20.0% |
| !!! | ATTTTGTGTATTTTCAACTA+CGG | - | chr1_4:41101561-41101580 | None:intergenic | 20.0% |
| !!! | CATCATATTTTGATGTTAAA+TGG | - | chr1_4:41101592-41101611 | None:intergenic | 20.0% |
| !! | ATTTCAATGTAAGACATTAT+GGG | + | chr1_4:41101773-41101792 | Msa0163160:intron | 20.0% |
| !! | ATATACTAATGTGGTTAATT+TGG | + | chr1_4:41101911-41101930 | Msa0163160:intron | 20.0% |
| !!! | TGTTGAGTTTTTATATAAAG+GGG | + | chr1_4:41101947-41101966 | Msa0163160:intron | 20.0% |
| !!! | TTGTGTATAACTTTTACTTA+TGG | + | chr1_4:41101988-41102007 | Msa0163160:intron | 20.0% |
| !!! | CATTTTTAGTAATACTTCAT+CGG | + | chr1_4:41102663-41102682 | Msa0163160:intron | 20.0% |
| !!! | TCTTGTTATTTTGAAACATT+AGG | + | chr1_4:41102932-41102951 | Msa0163160:intron | 20.0% |
| !!! | ATTTTACTTGTATTTTAGGA+CGG | - | chr1_4:41103074-41103093 | None:intergenic | 20.0% |
| !! | TCTACAAAAATTAATGTATC+TGG | + | chr1_4:41103098-41103117 | Msa0163160:intron | 20.0% |
| !!! | GTAACATAAGTTGATATATT+TGG | - | chr1_4:41103140-41103159 | None:intergenic | 20.0% |
| !! | TATGTCTTATGATAACAAAT+TGG | - | chr1_4:41103189-41103208 | None:intergenic | 20.0% |
| !! | TTATGTCTCTATTATAACTT+TGG | - | chr1_4:41103287-41103306 | None:intergenic | 20.0% |
| !!! | AAAACAATGGTTTTTAAACA+TGG | - | chr1_4:41103611-41103630 | None:intergenic | 20.0% |
| !! | TATTGAATATAAAGTGAAGA+TGG | - | chr1_4:41104504-41104523 | None:intergenic | 20.0% |
| !!! | GTCTATTTTGAATGTATTTT+GGG | + | chr1_4:41104844-41104863 | Msa0163160:intron | 20.0% |
| !! | TAATTTAGTGTATATACTAG+GGG | - | chr1_4:41104958-41104977 | None:intergenic | 20.0% |
| !! | CTAATTTAGTGTATATACTA+GGG | - | chr1_4:41104959-41104978 | None:intergenic | 20.0% |
| !! | AGAAATAAATAAGTTAGGAT+GGG | - | chr1_4:41105062-41105081 | None:intergenic | 20.0% |
| !! | TAGAAATAAATAAGTTAGGA+TGG | - | chr1_4:41105063-41105082 | None:intergenic | 20.0% |
| !!! | GTTCTTTTTTCAATATCAAA+GGG | + | chr1_4:41107012-41107031 | Msa0163160:intron | 20.0% |
| !!! | GAAATAATTTGTAATAAGTG+TGG | - | chr1_4:41107612-41107631 | None:intergenic | 20.0% |
| !! | TAAAGAATCAAATGCAAAAT+TGG | + | chr1_4:41107668-41107687 | Msa0163160:intron | 20.0% |
| !! | AAAGAATCAAATGCAAAATT+GGG | + | chr1_4:41107669-41107688 | Msa0163160:intron | 20.0% |
| !! | TAACTAAACAATCATTTAAC+TGG | - | chr1_4:41107705-41107724 | None:intergenic | 20.0% |
| !! | CGTAATATAAAAAATCGTAT+AGG | + | chr1_4:41107783-41107802 | Msa0163160:intron | 20.0% |
| !!! | TCCAAAAAATTTTAATAGTG+GGG | - | chr1_4:41107828-41107847 | None:intergenic | 20.0% |
| !!! | GATCCAAAAAATTTTAATAG+TGG | - | chr1_4:41107830-41107849 | None:intergenic | 20.0% |
| !! | TGTAAATGAAAAAGAAACAA+AGG | - | chr1_4:41107867-41107886 | None:intergenic | 20.0% |
| !!! | TCCTTTTATCTTAAAAGAAA+TGG | + | chr1_4:41107891-41107910 | Msa0163160:intron | 20.0% |
| !!! | TCCATTTCTTTTAAGATAAA+AGG | - | chr1_4:41107895-41107914 | None:intergenic | 20.0% |
| !!! | TTTTATCTTAAAAGAAATGG+AGG | + | chr1_4:41107894-41107913 | Msa0163160:intron | 20.0% |
| !! | ACAAAAAAAATATGAACATG+AGG | - | chr1_4:41100610-41100629 | None:intergenic | 20.0% |
| !!! | TCATGTTCATATTTTTTTTG+TGG | + | chr1_4:41100609-41100628 | Msa0163160:intron | 20.0% |
| !!! | TTTTATAAAGTTCCAAATCT+AGG | + | chr1_4:41100708-41100727 | Msa0163160:intron | 20.0% |
| !! | TAAAAATCATGAAAGATTGT+GGG | - | chr1_4:41101012-41101031 | None:intergenic | 20.0% |
| !! | ATAAAAATCATGAAAGATTG+TGG | - | chr1_4:41101013-41101032 | None:intergenic | 20.0% |
| !!! | ATAGAGATTGATTGATTTAT+TGG | - | chr1_4:41101117-41101136 | None:intergenic | 20.0% |
| !!! | ATTTTGTGTATTTTCAACTA+CGG | - | chr1_4:41101561-41101580 | None:intergenic | 20.0% |
| !!! | CATCATATTTTGATGTTAAA+TGG | - | chr1_4:41101592-41101611 | None:intergenic | 20.0% |
| !! | ATTTCAATGTAAGACATTAT+GGG | + | chr1_4:41101773-41101792 | Msa0163160:intron | 20.0% |
| !! | ATATACTAATGTGGTTAATT+TGG | + | chr1_4:41101911-41101930 | Msa0163160:intron | 20.0% |
| !!! | TGTTGAGTTTTTATATAAAG+GGG | + | chr1_4:41101947-41101966 | Msa0163160:intron | 20.0% |
| !!! | TTGTGTATAACTTTTACTTA+TGG | + | chr1_4:41101988-41102007 | Msa0163160:intron | 20.0% |
| !!! | CATTTTTAGTAATACTTCAT+CGG | + | chr1_4:41102663-41102682 | Msa0163160:intron | 20.0% |
| !!! | TCTTGTTATTTTGAAACATT+AGG | + | chr1_4:41102932-41102951 | Msa0163160:intron | 20.0% |
| !!! | ATTTTACTTGTATTTTAGGA+CGG | - | chr1_4:41103074-41103093 | None:intergenic | 20.0% |
| !! | TCTACAAAAATTAATGTATC+TGG | + | chr1_4:41103098-41103117 | Msa0163160:intron | 20.0% |
| !!! | GTAACATAAGTTGATATATT+TGG | - | chr1_4:41103140-41103159 | None:intergenic | 20.0% |
| !! | TATGTCTTATGATAACAAAT+TGG | - | chr1_4:41103189-41103208 | None:intergenic | 20.0% |
| !! | TTATGTCTCTATTATAACTT+TGG | - | chr1_4:41103287-41103306 | None:intergenic | 20.0% |
| !!! | AAAACAATGGTTTTTAAACA+TGG | - | chr1_4:41103611-41103630 | None:intergenic | 20.0% |
| !! | TATTGAATATAAAGTGAAGA+TGG | - | chr1_4:41104504-41104523 | None:intergenic | 20.0% |
| !!! | GTCTATTTTGAATGTATTTT+GGG | + | chr1_4:41104844-41104863 | Msa0163160:intron | 20.0% |
| !! | TAATTTAGTGTATATACTAG+GGG | - | chr1_4:41104958-41104977 | None:intergenic | 20.0% |
| !! | CTAATTTAGTGTATATACTA+GGG | - | chr1_4:41104959-41104978 | None:intergenic | 20.0% |
| !! | AGAAATAAATAAGTTAGGAT+GGG | - | chr1_4:41105062-41105081 | None:intergenic | 20.0% |
| !! | TAGAAATAAATAAGTTAGGA+TGG | - | chr1_4:41105063-41105082 | None:intergenic | 20.0% |
| !!! | GTTCTTTTTTCAATATCAAA+GGG | + | chr1_4:41107012-41107031 | Msa0163160:intron | 20.0% |
| !!! | GAAATAATTTGTAATAAGTG+TGG | - | chr1_4:41107612-41107631 | None:intergenic | 20.0% |
| !! | TAAAGAATCAAATGCAAAAT+TGG | + | chr1_4:41107668-41107687 | Msa0163160:intron | 20.0% |
| !! | AAAGAATCAAATGCAAAATT+GGG | + | chr1_4:41107669-41107688 | Msa0163160:intron | 20.0% |
| !! | TAACTAAACAATCATTTAAC+TGG | - | chr1_4:41107705-41107724 | None:intergenic | 20.0% |
| !! | CGTAATATAAAAAATCGTAT+AGG | + | chr1_4:41107783-41107802 | Msa0163160:intron | 20.0% |
| !!! | TCCAAAAAATTTTAATAGTG+GGG | - | chr1_4:41107828-41107847 | None:intergenic | 20.0% |
| !!! | GATCCAAAAAATTTTAATAG+TGG | - | chr1_4:41107830-41107849 | None:intergenic | 20.0% |
| !! | TGTAAATGAAAAAGAAACAA+AGG | - | chr1_4:41107867-41107886 | None:intergenic | 20.0% |
| !!! | TCCTTTTATCTTAAAAGAAA+TGG | + | chr1_4:41107891-41107910 | Msa0163160:intron | 20.0% |
| !!! | TCCATTTCTTTTAAGATAAA+AGG | - | chr1_4:41107895-41107914 | None:intergenic | 20.0% |
| !!! | TTTTATCTTAAAAGAAATGG+AGG | + | chr1_4:41107894-41107913 | Msa0163160:intron | 20.0% |
| ! | AAACCAAATCAAAGTTTAAG+AGG | + | chr1_4:41100328-41100347 | Msa0163160:CDS | 25.0% |
| ! | AATCCTCTTAAACTTTGATT+TGG | - | chr1_4:41100334-41100353 | None:intergenic | 25.0% |
| ! | CTTTGTATCATTACACTATA+CGG | + | chr1_4:41100961-41100980 | Msa0163160:intron | 25.0% |
| !!! | TTTTATTGATTGCTAAGAAG+TGG | + | chr1_4:41101693-41101712 | Msa0163160:intron | 25.0% |
| !! | TTTATTGATTGCTAAGAAGT+GGG | + | chr1_4:41101694-41101713 | Msa0163160:intron | 25.0% |
| ! | GATTTCAATGTAAGACATTA+TGG | + | chr1_4:41101772-41101791 | Msa0163160:intron | 25.0% |
| ! | TTTCAATGTAAGACATTATG+GGG | + | chr1_4:41101774-41101793 | Msa0163160:intron | 25.0% |
| ! | ATAAAATATTGGTAGAGTGT+GGG | + | chr1_4:41101801-41101820 | Msa0163160:intron | 25.0% |
| !! | GTTGAGTTTTTATATAAAGG+GGG | + | chr1_4:41101948-41101967 | Msa0163160:intron | 25.0% |
| !! | TTGAGTTTTTATATAAAGGG+GGG | + | chr1_4:41101949-41101968 | Msa0163160:intron | 25.0% |
| !!! | TTTTGAAGACATTGGTTAAA+AGG | + | chr1_4:41102020-41102039 | Msa0163160:intron | 25.0% |
| ! | TCTGTAAAAAATAAGCCAAA+AGG | - | chr1_4:41102052-41102071 | None:intergenic | 25.0% |
| ! | GACTAATGATGTATGTTATA+TGG | + | chr1_4:41102292-41102311 | Msa0163160:intron | 25.0% |
| !! | CGATGAAGTATTACTAAAAA+TGG | - | chr1_4:41102665-41102684 | None:intergenic | 25.0% |
| !!! | TGTTATTTTGAAACATTAGG+TGG | + | chr1_4:41102935-41102954 | Msa0163160:intron | 25.0% |
| ! | AATTGCTGGAAATTATTACT+TGG | + | chr1_4:41102975-41102994 | Msa0163160:intron | 25.0% |
| ! | ATTGCTGGAAATTATTACTT+GGG | + | chr1_4:41102976-41102995 | Msa0163160:intron | 25.0% |
| ! | CTATAACCAAAGAAGTAAAA+CGG | - | chr1_4:41103219-41103238 | None:intergenic | 25.0% |
| ! | TTTACTTCTTTGGTTATAGT+TGG | + | chr1_4:41103220-41103239 | Msa0163160:intron | 25.0% |
| ! | TTACTTCTTTGGTTATAGTT+GGG | + | chr1_4:41103221-41103240 | Msa0163160:intron | 25.0% |
| ! | CTTAAGATACGTAAAAACAA+TGG | - | chr1_4:41103624-41103643 | None:intergenic | 25.0% |
| ! | TAAGCATGATACATAACATT+AGG | + | chr1_4:41103729-41103748 | Msa0163160:intron | 25.0% |
| ! | ACATGAAAAGATAGTACTTT+AGG | + | chr1_4:41103807-41103826 | Msa0163160:intron | 25.0% |
| ! | CAAAAAACCAATAAAGTTGT+TGG | + | chr1_4:41103977-41103996 | Msa0163160:intron | 25.0% |
| !! | TTAGTAATTCACATTTTCGT+CGG | + | chr1_4:41104127-41104146 | Msa0163160:intron | 25.0% |
| !!! | GTTTAATATTTTTATGGTGC+AGG | + | chr1_4:41104310-41104329 | Msa0163160:intron | 25.0% |
| ! | ATACATATTGCTAAAACAAG+TGG | + | chr1_4:41104593-41104612 | Msa0163160:intron | 25.0% |
| ! | TACATATTGCTAAAACAAGT+GGG | + | chr1_4:41104594-41104613 | Msa0163160:intron | 25.0% |
| ! | TCTTATATAAGATCATCACA+TGG | - | chr1_4:41104761-41104780 | None:intergenic | 25.0% |
| ! | ATGATCTTATATAAGACTAG+TGG | + | chr1_4:41104765-41104784 | Msa0163160:intron | 25.0% |
| ! | TGATCTTATATAAGACTAGT+GGG | + | chr1_4:41104766-41104785 | Msa0163160:intron | 25.0% |
| !!! | GGTCTATTTTGAATGTATTT+TGG | + | chr1_4:41104843-41104862 | Msa0163160:intron | 25.0% |
| ! | CCTAATTTAGTGTATATACT+AGG | - | chr1_4:41104960-41104979 | None:intergenic | 25.0% |
| ! | CCTAGTATATACACTAAATT+AGG | + | chr1_4:41104957-41104976 | Msa0163160:intron | 25.0% |
| ! | AGAAATATTAAGCTAGGAAA+GGG | - | chr1_4:41105125-41105144 | None:intergenic | 25.0% |
| ! | TAGAAATATTAAGCTAGGAA+AGG | - | chr1_4:41105126-41105145 | None:intergenic | 25.0% |
| !! | TTGTATTATTTGTTGAAGGT+AGG | - | chr1_4:41105175-41105194 | None:intergenic | 25.0% |
| ! | ATACAAATATCCAACATAAG+TGG | - | chr1_4:41105649-41105668 | None:intergenic | 25.0% |
| !!! | CACACTTGAATATTTGTTTT+AGG | - | chr1_4:41105688-41105707 | None:intergenic | 25.0% |
| ! | TAATATATAGGCACGTTTAT+AGG | - | chr1_4:41105918-41105937 | None:intergenic | 25.0% |
| ! | TATAAACGTGCCTATATATT+AGG | + | chr1_4:41105917-41105936 | Msa0163160:intron | 25.0% |
| ! | AAAGGAAACTCCTAATATAT+AGG | - | chr1_4:41105930-41105949 | None:intergenic | 25.0% |
| ! | TATATATACTGAAGCAATAC+GGG | - | chr1_4:41106015-41106034 | None:intergenic | 25.0% |
| ! | CTATATATACTGAAGCAATA+CGG | - | chr1_4:41106016-41106035 | None:intergenic | 25.0% |
| ! | ATTGCAAGATTAGATCATTT+AGG | + | chr1_4:41106071-41106090 | Msa0163160:intron | 25.0% |
| ! | TTGCAAGATTAGATCATTTA+GGG | + | chr1_4:41106072-41106091 | Msa0163160:intron | 25.0% |
| ! | TTTAGTAAACTGAGAATCAT+AGG | + | chr1_4:41106283-41106302 | Msa0163160:intron | 25.0% |
| ! | TTAGTAAACTGAGAATCATA+GGG | + | chr1_4:41106284-41106303 | Msa0163160:intron | 25.0% |
| ! | TCTCAAAAAACAAACAACAA+AGG | - | chr1_4:41106779-41106798 | None:intergenic | 25.0% |
| ! | TTATGTTTGATTAGAGATTG+TGG | + | chr1_4:41106958-41106977 | Msa0163160:intron | 25.0% |
| !!! | GGTTCTTTTTTCAATATCAA+AGG | + | chr1_4:41107011-41107030 | Msa0163160:intron | 25.0% |
| !!! | TCTTCATATTTTTTGTAACC+TGG | + | chr1_4:41107327-41107346 | Msa0163160:intron | 25.0% |
| ! | TATCATGATGTATTCTCATT+TGG | + | chr1_4:41107441-41107460 | Msa0163160:intron | 25.0% |
| ! | ATCATGATGTATTCTCATTT+GGG | + | chr1_4:41107442-41107461 | Msa0163160:intron | 25.0% |
| !! | AGTGTTTCTAAAAATTGTGT+AGG | - | chr1_4:41107540-41107559 | None:intergenic | 25.0% |
| ! | AGATATATGAAGATATGTGT+GGG | - | chr1_4:41107642-41107661 | None:intergenic | 25.0% |
| ! | AAGATATATGAAGATATGTG+TGG | - | chr1_4:41107643-41107662 | None:intergenic | 25.0% |
| !!! | CCAAAAAATTTTAATAGTGG+GGG | - | chr1_4:41107827-41107846 | None:intergenic | 25.0% |
| ! | AAACCAAATCAAAGTTTAAG+AGG | + | chr1_4:41100328-41100347 | Msa0163160:CDS | 25.0% |
| ! | AATCCTCTTAAACTTTGATT+TGG | - | chr1_4:41100334-41100353 | None:intergenic | 25.0% |
| ! | CTTTGTATCATTACACTATA+CGG | + | chr1_4:41100961-41100980 | Msa0163160:intron | 25.0% |
| !!! | TTTTATTGATTGCTAAGAAG+TGG | + | chr1_4:41101693-41101712 | Msa0163160:intron | 25.0% |
| !! | TTTATTGATTGCTAAGAAGT+GGG | + | chr1_4:41101694-41101713 | Msa0163160:intron | 25.0% |
| ! | GATTTCAATGTAAGACATTA+TGG | + | chr1_4:41101772-41101791 | Msa0163160:intron | 25.0% |
| ! | TTTCAATGTAAGACATTATG+GGG | + | chr1_4:41101774-41101793 | Msa0163160:intron | 25.0% |
| ! | ATAAAATATTGGTAGAGTGT+GGG | + | chr1_4:41101801-41101820 | Msa0163160:intron | 25.0% |
| !! | GTTGAGTTTTTATATAAAGG+GGG | + | chr1_4:41101948-41101967 | Msa0163160:intron | 25.0% |
| !! | TTGAGTTTTTATATAAAGGG+GGG | + | chr1_4:41101949-41101968 | Msa0163160:intron | 25.0% |
| !!! | TTTTGAAGACATTGGTTAAA+AGG | + | chr1_4:41102020-41102039 | Msa0163160:intron | 25.0% |
| ! | TCTGTAAAAAATAAGCCAAA+AGG | - | chr1_4:41102052-41102071 | None:intergenic | 25.0% |
| ! | GACTAATGATGTATGTTATA+TGG | + | chr1_4:41102292-41102311 | Msa0163160:intron | 25.0% |
| !! | CGATGAAGTATTACTAAAAA+TGG | - | chr1_4:41102665-41102684 | None:intergenic | 25.0% |
| !!! | TGTTATTTTGAAACATTAGG+TGG | + | chr1_4:41102935-41102954 | Msa0163160:intron | 25.0% |
| ! | AATTGCTGGAAATTATTACT+TGG | + | chr1_4:41102975-41102994 | Msa0163160:intron | 25.0% |
| ! | ATTGCTGGAAATTATTACTT+GGG | + | chr1_4:41102976-41102995 | Msa0163160:intron | 25.0% |
| ! | CTATAACCAAAGAAGTAAAA+CGG | - | chr1_4:41103219-41103238 | None:intergenic | 25.0% |
| ! | TTTACTTCTTTGGTTATAGT+TGG | + | chr1_4:41103220-41103239 | Msa0163160:intron | 25.0% |
| ! | TTACTTCTTTGGTTATAGTT+GGG | + | chr1_4:41103221-41103240 | Msa0163160:intron | 25.0% |
| ! | CTTAAGATACGTAAAAACAA+TGG | - | chr1_4:41103624-41103643 | None:intergenic | 25.0% |
| ! | TAAGCATGATACATAACATT+AGG | + | chr1_4:41103729-41103748 | Msa0163160:intron | 25.0% |
| ! | ACATGAAAAGATAGTACTTT+AGG | + | chr1_4:41103807-41103826 | Msa0163160:intron | 25.0% |
| ! | CAAAAAACCAATAAAGTTGT+TGG | + | chr1_4:41103977-41103996 | Msa0163160:intron | 25.0% |
| !! | TTAGTAATTCACATTTTCGT+CGG | + | chr1_4:41104127-41104146 | Msa0163160:intron | 25.0% |
| !!! | GTTTAATATTTTTATGGTGC+AGG | + | chr1_4:41104310-41104329 | Msa0163160:intron | 25.0% |
| ! | ATACATATTGCTAAAACAAG+TGG | + | chr1_4:41104593-41104612 | Msa0163160:intron | 25.0% |
| ! | TACATATTGCTAAAACAAGT+GGG | + | chr1_4:41104594-41104613 | Msa0163160:intron | 25.0% |
| ! | TCTTATATAAGATCATCACA+TGG | - | chr1_4:41104761-41104780 | None:intergenic | 25.0% |
| ! | ATGATCTTATATAAGACTAG+TGG | + | chr1_4:41104765-41104784 | Msa0163160:intron | 25.0% |
| ! | TGATCTTATATAAGACTAGT+GGG | + | chr1_4:41104766-41104785 | Msa0163160:intron | 25.0% |
| !!! | GGTCTATTTTGAATGTATTT+TGG | + | chr1_4:41104843-41104862 | Msa0163160:intron | 25.0% |
| ! | CCTAATTTAGTGTATATACT+AGG | - | chr1_4:41104960-41104979 | None:intergenic | 25.0% |
| ! | CCTAGTATATACACTAAATT+AGG | + | chr1_4:41104957-41104976 | Msa0163160:intron | 25.0% |
| ! | AGAAATATTAAGCTAGGAAA+GGG | - | chr1_4:41105125-41105144 | None:intergenic | 25.0% |
| ! | TAGAAATATTAAGCTAGGAA+AGG | - | chr1_4:41105126-41105145 | None:intergenic | 25.0% |
| !! | TTGTATTATTTGTTGAAGGT+AGG | - | chr1_4:41105175-41105194 | None:intergenic | 25.0% |
| ! | ATACAAATATCCAACATAAG+TGG | - | chr1_4:41105649-41105668 | None:intergenic | 25.0% |
| !!! | CACACTTGAATATTTGTTTT+AGG | - | chr1_4:41105688-41105707 | None:intergenic | 25.0% |
| ! | TAATATATAGGCACGTTTAT+AGG | - | chr1_4:41105918-41105937 | None:intergenic | 25.0% |
| ! | TATAAACGTGCCTATATATT+AGG | + | chr1_4:41105917-41105936 | Msa0163160:intron | 25.0% |
| ! | AAAGGAAACTCCTAATATAT+AGG | - | chr1_4:41105930-41105949 | None:intergenic | 25.0% |
| ! | TATATATACTGAAGCAATAC+GGG | - | chr1_4:41106015-41106034 | None:intergenic | 25.0% |
| ! | CTATATATACTGAAGCAATA+CGG | - | chr1_4:41106016-41106035 | None:intergenic | 25.0% |
| ! | ATTGCAAGATTAGATCATTT+AGG | + | chr1_4:41106071-41106090 | Msa0163160:intron | 25.0% |
| ! | TTGCAAGATTAGATCATTTA+GGG | + | chr1_4:41106072-41106091 | Msa0163160:intron | 25.0% |
| ! | TTTAGTAAACTGAGAATCAT+AGG | + | chr1_4:41106283-41106302 | Msa0163160:intron | 25.0% |
| ! | TTAGTAAACTGAGAATCATA+GGG | + | chr1_4:41106284-41106303 | Msa0163160:intron | 25.0% |
| ! | TCTCAAAAAACAAACAACAA+AGG | - | chr1_4:41106779-41106798 | None:intergenic | 25.0% |
| ! | TTATGTTTGATTAGAGATTG+TGG | + | chr1_4:41106958-41106977 | Msa0163160:intron | 25.0% |
| !!! | GGTTCTTTTTTCAATATCAA+AGG | + | chr1_4:41107011-41107030 | Msa0163160:intron | 25.0% |
| !!! | TCTTCATATTTTTTGTAACC+TGG | + | chr1_4:41107327-41107346 | Msa0163160:intron | 25.0% |
| ! | TATCATGATGTATTCTCATT+TGG | + | chr1_4:41107441-41107460 | Msa0163160:intron | 25.0% |
| ! | ATCATGATGTATTCTCATTT+GGG | + | chr1_4:41107442-41107461 | Msa0163160:intron | 25.0% |
| !! | AGTGTTTCTAAAAATTGTGT+AGG | - | chr1_4:41107540-41107559 | None:intergenic | 25.0% |
| ! | AGATATATGAAGATATGTGT+GGG | - | chr1_4:41107642-41107661 | None:intergenic | 25.0% |
| ! | AAGATATATGAAGATATGTG+TGG | - | chr1_4:41107643-41107662 | None:intergenic | 25.0% |
| !!! | CCAAAAAATTTTAATAGTGG+GGG | - | chr1_4:41107827-41107846 | None:intergenic | 25.0% |
| TGTTGAACTAGCAAAAGAAA+TGG | + | chr1_4:41100407-41100426 | Msa0163160:CDS | 30.0% | |
| ATAAACAAAGGAGAAGAAAG+AGG | - | chr1_4:41100665-41100684 | None:intergenic | 30.0% | |
| CAACAATCTTAACCTAGATT+TGG | - | chr1_4:41100723-41100742 | None:intergenic | 30.0% | |
| AATCTAGGTTAAGATTGTTG+AGG | + | chr1_4:41100723-41100742 | Msa0163160:intron | 30.0% | |
| !!! | AGATTGTTTTATTTGCTAGC+TGG | + | chr1_4:41100753-41100772 | Msa0163160:intron | 30.0% |
| AAAACTAAGATCATGCAAGA+AGG | - | chr1_4:41100801-41100820 | None:intergenic | 30.0% | |
| ! | TGATTTTTATCCTATAGCCA+AGG | + | chr1_4:41101023-41101042 | Msa0163160:intron | 30.0% |
| ! | GATTTTTATCCTATAGCCAA+GGG | + | chr1_4:41101024-41101043 | Msa0163160:intron | 30.0% |
| AAAAAAAAATAGGTAGCCCT+TGG | - | chr1_4:41101043-41101062 | None:intergenic | 30.0% | |
| !! | TTGTTACTTTCTTTCTTGCT+TGG | + | chr1_4:41101200-41101219 | Msa0163160:intron | 30.0% |
| ! | GTTTGTGTTTTCAATGTTGA+AGG | + | chr1_4:41101268-41101287 | Msa0163160:intron | 30.0% |
| !! | AGAAGGATTGATTTGGTTTA+TGG | + | chr1_4:41101296-41101315 | Msa0163160:CDS | 30.0% |
| GTCTATATCTATGTGTTTGT+TGG | + | chr1_4:41101650-41101669 | Msa0163160:intron | 30.0% | |
| TCATTAATTTCTTAGGGAAC+AGG | - | chr1_4:41101754-41101773 | None:intergenic | 30.0% | |
| TTCAATGTAAGACATTATGG+GGG | + | chr1_4:41101775-41101794 | Msa0163160:intron | 30.0% | |
| TATGGGGGATCATAAAATAT+TGG | + | chr1_4:41101790-41101809 | Msa0163160:intron | 30.0% | |
| CATAAAATATTGGTAGAGTG+TGG | + | chr1_4:41101800-41101819 | Msa0163160:intron | 30.0% | |
| ATTTAGAAGCTTCTATAGAG+GGG | - | chr1_4:41101847-41101866 | None:intergenic | 30.0% | |
| CATTTAGAAGCTTCTATAGA+GGG | - | chr1_4:41101848-41101867 | None:intergenic | 30.0% | |
| ACATTTAGAAGCTTCTATAG+AGG | - | chr1_4:41101849-41101868 | None:intergenic | 30.0% | |
| CTATAGAAGCTTCTAAATGT+AGG | + | chr1_4:41101849-41101868 | Msa0163160:intron | 30.0% | |
| !! | TAGAAGCTTTTTGAAGACAT+TGG | + | chr1_4:41102012-41102031 | Msa0163160:intron | 30.0% |
| AAAGGAAAAGGCAAAAACAT+TGG | - | chr1_4:41102098-41102117 | None:intergenic | 30.0% | |
| CTACACTAGTAAAACATGAA+AGG | + | chr1_4:41102600-41102619 | Msa0163160:intron | 30.0% | |
| AATGTATGAAGCCTCTAATA+TGG | - | chr1_4:41102791-41102810 | None:intergenic | 30.0% | |
| TAGGATATTATCATGTGAAG+TGG | + | chr1_4:41102868-41102887 | Msa0163160:intron | 30.0% | |
| AGGATATTATCATGTGAAGT+GGG | + | chr1_4:41102869-41102888 | Msa0163160:intron | 30.0% | |
| ATTTGGTTAACACATGAAGT+TGG | + | chr1_4:41102899-41102918 | Msa0163160:intron | 30.0% | |
| ! | TTTGAAACATTAGGTGGATA+TGG | + | chr1_4:41102941-41102960 | Msa0163160:intron | 30.0% |
| AATTTCCAGCAATTCTTCAA+GGG | - | chr1_4:41102969-41102988 | None:intergenic | 30.0% | |
| TAATTTCCAGCAATTCTTCA+AGG | - | chr1_4:41102970-41102989 | None:intergenic | 30.0% | |
| !!! | TATATGCCGTTTTACTTCTT+TGG | + | chr1_4:41103210-41103229 | Msa0163160:intron | 30.0% |
| TACTTCTTTGGTTATAGTTG+GGG | + | chr1_4:41103222-41103241 | Msa0163160:intron | 30.0% | |
| TATAATTGAACCGAAACATG+TGG | + | chr1_4:41103766-41103785 | Msa0163160:intron | 30.0% | |
| ATAATTGAACCGAAACATGT+GGG | + | chr1_4:41103767-41103786 | Msa0163160:intron | 30.0% | |
| GATATATGACGTTAGATTGA+TGG | + | chr1_4:41103874-41103893 | Msa0163160:intron | 30.0% | |
| ATATCTTTCTCCCATTCAAA+TGG | - | chr1_4:41103904-41103923 | None:intergenic | 30.0% | |
| ! | AGAGCAATTCACATTTTTGT+CGG | + | chr1_4:41104045-41104064 | Msa0163160:intron | 30.0% |
| !! | TAATATTTTTATGGTGCAGG+TGG | + | chr1_4:41104313-41104332 | Msa0163160:intron | 30.0% |
| !! | AATATTTTTATGGTGCAGGT+GGG | + | chr1_4:41104314-41104333 | Msa0163160:intron | 30.0% |
| ATTGTTGTGTTTCATTGACA+AGG | + | chr1_4:41104367-41104386 | Msa0163160:intron | 30.0% | |
| CATTTAATGTTATGTGAAGC+AGG | + | chr1_4:41104654-41104673 | Msa0163160:intron | 30.0% | |
| AGATGAATATGTATCCAAGT+TGG | + | chr1_4:41104693-41104712 | Msa0163160:CDS | 30.0% | |
| ATAGTCATATATATGGGCAT+AGG | + | chr1_4:41104875-41104894 | Msa0163160:intron | 30.0% | |
| AAATATTAAGCTAGGAAAGG+GGG | - | chr1_4:41105123-41105142 | None:intergenic | 30.0% | |
| GAAATATTAAGCTAGGAAAG+GGG | - | chr1_4:41105124-41105143 | None:intergenic | 30.0% | |
| CGGTGAATTTGAATTGAAAT+TGG | + | chr1_4:41105246-41105265 | Msa0163160:intron | 30.0% | |
| !! | GATTGATTTGTTATGGTTTG+AGG | + | chr1_4:41105552-41105571 | Msa0163160:intron | 30.0% |
| CAAATATTCAAGTGTGATGT+TGG | + | chr1_4:41105692-41105711 | Msa0163160:intron | 30.0% | |
| AAAGTAGATAGCACATTCTT+AGG | - | chr1_4:41105867-41105886 | None:intergenic | 30.0% | |
| TAAGAATGTGCTATCTACTT+TGG | + | chr1_4:41105866-41105885 | Msa0163160:intron | 30.0% | |
| !! | CTATCTACTTTGGAAAGTTT+TGG | + | chr1_4:41105876-41105895 | Msa0163160:intron | 30.0% |
| ! | ATATTAGGAGTTTCCTTTTC+TGG | + | chr1_4:41105932-41105951 | Msa0163160:intron | 30.0% |
| ATGATCTAATCTTGCAATGA+TGG | - | chr1_4:41106069-41106088 | None:intergenic | 30.0% | |
| TATCATCTTGATGCATGTTT+AGG | + | chr1_4:41106126-41106145 | Msa0163160:intron | 30.0% | |
| ! | AAGCTTTTAAGCAAAGAGTT+AGG | + | chr1_4:41106184-41106203 | Msa0163160:intron | 30.0% |
| ! | TTTTAAGCAAAGAGTTAGGT+AGG | + | chr1_4:41106188-41106207 | Msa0163160:intron | 30.0% |
| TAGTAAACTGAGAATCATAG+GGG | + | chr1_4:41106285-41106304 | Msa0163160:intron | 30.0% | |
| AAGAGATTGTTAACTCAGTT+CGG | - | chr1_4:41106486-41106505 | None:intergenic | 30.0% | |
| !! | AACATCTGTTTTTCTATGAC+TGG | + | chr1_4:41106585-41106604 | Msa0163160:intron | 30.0% |
| ! | CATCAGATAAGTTGAAATTC+TGG | - | chr1_4:41106649-41106668 | None:intergenic | 30.0% |
| GTCTGATTAAAAAACCTGAA+AGG | + | chr1_4:41107034-41107053 | Msa0163160:intron | 30.0% | |
| TTAACAGAATAGATCCTTTC+AGG | - | chr1_4:41107051-41107070 | None:intergenic | 30.0% | |
| AACATGGTATCAAAATCCAA+GGG | - | chr1_4:41107279-41107298 | None:intergenic | 30.0% | |
| AAACATGGTATCAAAATCCA+AGG | - | chr1_4:41107280-41107299 | None:intergenic | 30.0% | |
| AAAGAACAATTAGGGAAACA+TGG | - | chr1_4:41107295-41107314 | None:intergenic | 30.0% | |
| ACATCTGCAAAGAACAATTA+GGG | - | chr1_4:41107303-41107322 | None:intergenic | 30.0% | |
| AACATCTGCAAAGAACAATT+AGG | - | chr1_4:41107304-41107323 | None:intergenic | 30.0% | |
| GTGATTAGTGAATTTCTGTA+AGG | + | chr1_4:41107387-41107406 | Msa0163160:intron | 30.0% | |
| !!! | CCCCCACTATTAAAATTTTT+TGG | + | chr1_4:41107824-41107843 | Msa0163160:intron | 30.0% |
| TGTTGAACTAGCAAAAGAAA+TGG | + | chr1_4:41100407-41100426 | Msa0163160:CDS | 30.0% | |
| ATAAACAAAGGAGAAGAAAG+AGG | - | chr1_4:41100665-41100684 | None:intergenic | 30.0% | |
| CAACAATCTTAACCTAGATT+TGG | - | chr1_4:41100723-41100742 | None:intergenic | 30.0% | |
| AATCTAGGTTAAGATTGTTG+AGG | + | chr1_4:41100723-41100742 | Msa0163160:intron | 30.0% | |
| !!! | AGATTGTTTTATTTGCTAGC+TGG | + | chr1_4:41100753-41100772 | Msa0163160:intron | 30.0% |
| AAAACTAAGATCATGCAAGA+AGG | - | chr1_4:41100801-41100820 | None:intergenic | 30.0% | |
| ! | TGATTTTTATCCTATAGCCA+AGG | + | chr1_4:41101023-41101042 | Msa0163160:intron | 30.0% |
| ! | GATTTTTATCCTATAGCCAA+GGG | + | chr1_4:41101024-41101043 | Msa0163160:intron | 30.0% |
| AAAAAAAAATAGGTAGCCCT+TGG | - | chr1_4:41101043-41101062 | None:intergenic | 30.0% | |
| !! | TTGTTACTTTCTTTCTTGCT+TGG | + | chr1_4:41101200-41101219 | Msa0163160:intron | 30.0% |
| ! | GTTTGTGTTTTCAATGTTGA+AGG | + | chr1_4:41101268-41101287 | Msa0163160:intron | 30.0% |
| !! | AGAAGGATTGATTTGGTTTA+TGG | + | chr1_4:41101296-41101315 | Msa0163160:CDS | 30.0% |
| GTCTATATCTATGTGTTTGT+TGG | + | chr1_4:41101650-41101669 | Msa0163160:intron | 30.0% | |
| TCATTAATTTCTTAGGGAAC+AGG | - | chr1_4:41101754-41101773 | None:intergenic | 30.0% | |
| TTCAATGTAAGACATTATGG+GGG | + | chr1_4:41101775-41101794 | Msa0163160:intron | 30.0% | |
| TATGGGGGATCATAAAATAT+TGG | + | chr1_4:41101790-41101809 | Msa0163160:intron | 30.0% | |
| CATAAAATATTGGTAGAGTG+TGG | + | chr1_4:41101800-41101819 | Msa0163160:intron | 30.0% | |
| ATTTAGAAGCTTCTATAGAG+GGG | - | chr1_4:41101847-41101866 | None:intergenic | 30.0% | |
| CATTTAGAAGCTTCTATAGA+GGG | - | chr1_4:41101848-41101867 | None:intergenic | 30.0% | |
| ACATTTAGAAGCTTCTATAG+AGG | - | chr1_4:41101849-41101868 | None:intergenic | 30.0% | |
| CTATAGAAGCTTCTAAATGT+AGG | + | chr1_4:41101849-41101868 | Msa0163160:intron | 30.0% | |
| !! | TAGAAGCTTTTTGAAGACAT+TGG | + | chr1_4:41102012-41102031 | Msa0163160:intron | 30.0% |
| AAAGGAAAAGGCAAAAACAT+TGG | - | chr1_4:41102098-41102117 | None:intergenic | 30.0% | |
| CTACACTAGTAAAACATGAA+AGG | + | chr1_4:41102600-41102619 | Msa0163160:intron | 30.0% | |
| AATGTATGAAGCCTCTAATA+TGG | - | chr1_4:41102791-41102810 | None:intergenic | 30.0% | |
| TAGGATATTATCATGTGAAG+TGG | + | chr1_4:41102868-41102887 | Msa0163160:intron | 30.0% | |
| AGGATATTATCATGTGAAGT+GGG | + | chr1_4:41102869-41102888 | Msa0163160:intron | 30.0% | |
| ATTTGGTTAACACATGAAGT+TGG | + | chr1_4:41102899-41102918 | Msa0163160:intron | 30.0% | |
| ! | TTTGAAACATTAGGTGGATA+TGG | + | chr1_4:41102941-41102960 | Msa0163160:intron | 30.0% |
| AATTTCCAGCAATTCTTCAA+GGG | - | chr1_4:41102969-41102988 | None:intergenic | 30.0% | |
| TAATTTCCAGCAATTCTTCA+AGG | - | chr1_4:41102970-41102989 | None:intergenic | 30.0% | |
| !!! | TATATGCCGTTTTACTTCTT+TGG | + | chr1_4:41103210-41103229 | Msa0163160:intron | 30.0% |
| TACTTCTTTGGTTATAGTTG+GGG | + | chr1_4:41103222-41103241 | Msa0163160:intron | 30.0% | |
| TATAATTGAACCGAAACATG+TGG | + | chr1_4:41103766-41103785 | Msa0163160:intron | 30.0% | |
| ATAATTGAACCGAAACATGT+GGG | + | chr1_4:41103767-41103786 | Msa0163160:intron | 30.0% | |
| GATATATGACGTTAGATTGA+TGG | + | chr1_4:41103874-41103893 | Msa0163160:intron | 30.0% | |
| ATATCTTTCTCCCATTCAAA+TGG | - | chr1_4:41103904-41103923 | None:intergenic | 30.0% | |
| ! | AGAGCAATTCACATTTTTGT+CGG | + | chr1_4:41104045-41104064 | Msa0163160:intron | 30.0% |
| !! | TAATATTTTTATGGTGCAGG+TGG | + | chr1_4:41104313-41104332 | Msa0163160:intron | 30.0% |
| !! | AATATTTTTATGGTGCAGGT+GGG | + | chr1_4:41104314-41104333 | Msa0163160:intron | 30.0% |
| ATTGTTGTGTTTCATTGACA+AGG | + | chr1_4:41104367-41104386 | Msa0163160:intron | 30.0% | |
| CATTTAATGTTATGTGAAGC+AGG | + | chr1_4:41104654-41104673 | Msa0163160:intron | 30.0% | |
| AGATGAATATGTATCCAAGT+TGG | + | chr1_4:41104693-41104712 | Msa0163160:CDS | 30.0% | |
| ATAGTCATATATATGGGCAT+AGG | + | chr1_4:41104875-41104894 | Msa0163160:intron | 30.0% | |
| AAATATTAAGCTAGGAAAGG+GGG | - | chr1_4:41105123-41105142 | None:intergenic | 30.0% | |
| GAAATATTAAGCTAGGAAAG+GGG | - | chr1_4:41105124-41105143 | None:intergenic | 30.0% | |
| CGGTGAATTTGAATTGAAAT+TGG | + | chr1_4:41105246-41105265 | Msa0163160:intron | 30.0% | |
| !! | GATTGATTTGTTATGGTTTG+AGG | + | chr1_4:41105552-41105571 | Msa0163160:intron | 30.0% |
| CAAATATTCAAGTGTGATGT+TGG | + | chr1_4:41105692-41105711 | Msa0163160:intron | 30.0% | |
| AAAGTAGATAGCACATTCTT+AGG | - | chr1_4:41105867-41105886 | None:intergenic | 30.0% | |
| TAAGAATGTGCTATCTACTT+TGG | + | chr1_4:41105866-41105885 | Msa0163160:intron | 30.0% | |
| !! | CTATCTACTTTGGAAAGTTT+TGG | + | chr1_4:41105876-41105895 | Msa0163160:intron | 30.0% |
| ! | ATATTAGGAGTTTCCTTTTC+TGG | + | chr1_4:41105932-41105951 | Msa0163160:intron | 30.0% |
| ATGATCTAATCTTGCAATGA+TGG | - | chr1_4:41106069-41106088 | None:intergenic | 30.0% | |
| TATCATCTTGATGCATGTTT+AGG | + | chr1_4:41106126-41106145 | Msa0163160:intron | 30.0% | |
| ! | AAGCTTTTAAGCAAAGAGTT+AGG | + | chr1_4:41106184-41106203 | Msa0163160:intron | 30.0% |
| ! | TTTTAAGCAAAGAGTTAGGT+AGG | + | chr1_4:41106188-41106207 | Msa0163160:intron | 30.0% |
| TAGTAAACTGAGAATCATAG+GGG | + | chr1_4:41106285-41106304 | Msa0163160:intron | 30.0% | |
| AAGAGATTGTTAACTCAGTT+CGG | - | chr1_4:41106486-41106505 | None:intergenic | 30.0% | |
| !! | AACATCTGTTTTTCTATGAC+TGG | + | chr1_4:41106585-41106604 | Msa0163160:intron | 30.0% |
| ! | CATCAGATAAGTTGAAATTC+TGG | - | chr1_4:41106649-41106668 | None:intergenic | 30.0% |
| GTCTGATTAAAAAACCTGAA+AGG | + | chr1_4:41107034-41107053 | Msa0163160:intron | 30.0% | |
| TTAACAGAATAGATCCTTTC+AGG | - | chr1_4:41107051-41107070 | None:intergenic | 30.0% | |
| AACATGGTATCAAAATCCAA+GGG | - | chr1_4:41107279-41107298 | None:intergenic | 30.0% | |
| AAACATGGTATCAAAATCCA+AGG | - | chr1_4:41107280-41107299 | None:intergenic | 30.0% | |
| AAAGAACAATTAGGGAAACA+TGG | - | chr1_4:41107295-41107314 | None:intergenic | 30.0% | |
| ACATCTGCAAAGAACAATTA+GGG | - | chr1_4:41107303-41107322 | None:intergenic | 30.0% | |
| AACATCTGCAAAGAACAATT+AGG | - | chr1_4:41107304-41107323 | None:intergenic | 30.0% | |
| GTGATTAGTGAATTTCTGTA+AGG | + | chr1_4:41107387-41107406 | Msa0163160:intron | 30.0% | |
| !!! | CCCCCACTATTAAAATTTTT+TGG | + | chr1_4:41107824-41107843 | Msa0163160:intron | 30.0% |
| ! | AGAAGAAAGAGGTGTAACAA+GGG | - | chr1_4:41100654-41100673 | None:intergenic | 35.0% |
| ! | AATGCTTTCTGCACTTTTCT+AGG | + | chr1_4:41100921-41100940 | Msa0163160:intron | 35.0% |
| AAGATTGTGGGAAATGGTAA+AGG | - | chr1_4:41101000-41101019 | None:intergenic | 35.0% | |
| TCATGAAAGATTGTGGGAAA+TGG | - | chr1_4:41101006-41101025 | None:intergenic | 35.0% | |
| ACTTTCTTTCTTGCTTGGTT+TGG | + | chr1_4:41101205-41101224 | Msa0163160:intron | 35.0% | |
| !! | AGGATTGATTTGGTTTATGG+AGG | + | chr1_4:41101299-41101318 | Msa0163160:CDS | 35.0% |
| !! | ATTGATTTGGTTTATGGAGG+TGG | + | chr1_4:41101302-41101321 | Msa0163160:CDS | 35.0% |
| AAGAAACTAACCCAAGAACA+TGG | - | chr1_4:41101379-41101398 | None:intergenic | 35.0% | |
| TCATATCAGCATTAATGCAC+TGG | + | chr1_4:41101507-41101526 | Msa0163160:intron | 35.0% | |
| ! | GTATTTTCAACTACGGAGTT+CGG | - | chr1_4:41101554-41101573 | None:intergenic | 35.0% |
| ! | CTATGTGTTTGTTGGATGAA+AGG | + | chr1_4:41101658-41101677 | Msa0163160:intron | 35.0% |
| AGAAGCTTCTAAATGTAGGA+AGG | + | chr1_4:41101853-41101872 | Msa0163160:intron | 35.0% | |
| GAAGCTTCTAAATGTAGGAA+GGG | + | chr1_4:41101854-41101873 | Msa0163160:intron | 35.0% | |
| ! | GTTAAAAGGTGAATGCCTTT+TGG | + | chr1_4:41102034-41102053 | Msa0163160:intron | 35.0% |
| ! | TTTTACAGAAAGTTCATGCG+CGG | + | chr1_4:41102063-41102082 | Msa0163160:intron | 35.0% |
| AAAGGACAGCATTAACTCAA+TGG | - | chr1_4:41102369-41102388 | None:intergenic | 35.0% | |
| CTGTATCTGATATGCATCAA+AGG | + | chr1_4:41102517-41102536 | Msa0163160:CDS | 35.0% | |
| !!! | CTTCATCGGTTTTTGTTTAC+CGG | + | chr1_4:41102677-41102696 | Msa0163160:intron | 35.0% |
| CTTGGTTCAATGAAAGTCTT+TGG | - | chr1_4:41102767-41102786 | None:intergenic | 35.0% | |
| TTGAACCAAGACCATATTAG+AGG | + | chr1_4:41102777-41102796 | Msa0163160:intron | 35.0% | |
| GTGAAGTGGGATTCTTAATT+TGG | + | chr1_4:41102882-41102901 | Msa0163160:intron | 35.0% | |
| ATTATTACTTGGGCTCAACT+TGG | + | chr1_4:41102986-41103005 | Msa0163160:intron | 35.0% | |
| TTATTACTTGGGCTCAACTT+GGG | + | chr1_4:41102987-41103006 | Msa0163160:intron | 35.0% | |
| AAGAGTAGTATGGTTCTTAC+CGG | - | chr1_4:41103025-41103044 | None:intergenic | 35.0% | |
| ACTTCTTTGGTTATAGTTGG+GGG | + | chr1_4:41103223-41103242 | Msa0163160:intron | 35.0% | |
| GTATGACATGCATCATAGAT+AGG | - | chr1_4:41103571-41103590 | None:intergenic | 35.0% | |
| TAATTGAACCGAAACATGTG+GGG | + | chr1_4:41103768-41103787 | Msa0163160:intron | 35.0% | |
| ATTCAATACCCCACATGTTT+CGG | - | chr1_4:41103779-41103798 | None:intergenic | 35.0% | |
| ! | TTGATGGTTCTCCATTTGAA+TGG | + | chr1_4:41103890-41103909 | Msa0163160:intron | 35.0% |
| TGATGGTTCTCCATTTGAAT+GGG | + | chr1_4:41103891-41103910 | Msa0163160:intron | 35.0% | |
| CCATTGACCAACAACTTTAT+TGG | - | chr1_4:41103987-41104006 | None:intergenic | 35.0% | |
| CCAATAAAGTTGTTGGTCAA+TGG | + | chr1_4:41103984-41104003 | Msa0163160:intron | 35.0% | |
| ! | ACATTTTTGTCGGTAGTCAT+CGG | + | chr1_4:41104055-41104074 | Msa0163160:intron | 35.0% |
| GGAAATAAAGCCTTCATCAA+CGG | - | chr1_4:41104393-41104412 | None:intergenic | 35.0% | |
| GATACATATTCATCTTGCTC+AGG | - | chr1_4:41104688-41104707 | None:intergenic | 35.0% | |
| !! | AATATGTATCCAAGTTGGTG+TGG | + | chr1_4:41104698-41104717 | Msa0163160:CDS | 35.0% |
| !! | ATATGTATCCAAGTTGGTGT+GGG | + | chr1_4:41104699-41104718 | Msa0163160:CDS | 35.0% |
| !!! | GGTCCTTGTCTTTGTTTTTT+GGG | + | chr1_4:41104821-41104840 | Msa0163160:intron | 35.0% |
| !!! | GTCCTTGTCTTTGTTTTTTG+GGG | + | chr1_4:41104822-41104841 | Msa0163160:intron | 35.0% |
| !!! | ATCAATGGTTTTGGATATGG+AGG | - | chr1_4:41105343-41105362 | None:intergenic | 35.0% |
| ! | TTACATCGGATCAATGGTTT+TGG | - | chr1_4:41105352-41105371 | None:intergenic | 35.0% |
| TTGAGTTTACATCGGATCAA+TGG | - | chr1_4:41105358-41105377 | None:intergenic | 35.0% | |
| ACCACACATTGAGTTTACAT+CGG | - | chr1_4:41105366-41105385 | None:intergenic | 35.0% | |
| !! | GTCGGTTGATTGATTTGTTA+TGG | + | chr1_4:41105545-41105564 | Msa0163160:intron | 35.0% |
| CAAATATCCAACATAAGTGG+AGG | - | chr1_4:41105646-41105665 | None:intergenic | 35.0% | |
| ! | ACGCACGCGTTTTATATTTA+AGG | + | chr1_4:41105773-41105792 | Msa0163160:intron | 35.0% |
| ATCCACGCATTTATTCTTGT+TGG | + | chr1_4:41105797-41105816 | Msa0163160:intron | 35.0% | |
| !! | TCTACTTTGGAAAGTTTTGG+AGG | + | chr1_4:41105879-41105898 | Msa0163160:intron | 35.0% |
| !!! | AGTTTCCTTTTCTGGTTCTA+TGG | + | chr1_4:41105940-41105959 | Msa0163160:intron | 35.0% |
| ACAATCCATAGAACCAGAAA+AGG | - | chr1_4:41105948-41105967 | None:intergenic | 35.0% | |
| ! | TGGTTCTATGGATTGTGAAA+TGG | + | chr1_4:41105952-41105971 | Msa0163160:intron | 35.0% |
| TTGTTGGACTTCAGAACAAA+CGG | - | chr1_4:41105982-41106001 | None:intergenic | 35.0% | |
| AGAATCATAGGGGTTATGAT+TGG | + | chr1_4:41106295-41106314 | Msa0163160:intron | 35.0% | |
| GAATCATAGGGGTTATGATT+GGG | + | chr1_4:41106296-41106315 | Msa0163160:intron | 35.0% | |
| ! | TTCCTAGGTTGAAGTCAATA+CGG | + | chr1_4:41106354-41106373 | Msa0163160:intron | 35.0% |
| ATAGGTCTTTAGTGGAAACA+AGG | + | chr1_4:41106384-41106403 | Msa0163160:intron | 35.0% | |
| ! | AAGGTGTTTGCTAGAGAATA+AGG | + | chr1_4:41106403-41106422 | Msa0163160:intron | 35.0% |
| ATAACAGACAAGCAAGTGAA+AGG | - | chr1_4:41106513-41106532 | None:intergenic | 35.0% | |
| ! | TGTTTTTCTATGACTGGTGT+TGG | + | chr1_4:41106591-41106610 | Msa0163160:intron | 35.0% |
| ! | TGTTCTTAGTTCTCGATTGT+GGG | + | chr1_4:41106727-41106746 | Msa0163160:intron | 35.0% |
| AGTAGATTGGAACAATCTGA+CGG | - | chr1_4:41106851-41106870 | None:intergenic | 35.0% | |
| AACAACAAGCATCAGTAGAT+TGG | - | chr1_4:41106864-41106883 | None:intergenic | 35.0% | |
| ! | ACTTAAGACTCATTTTGCAG+TGG | + | chr1_4:41106990-41107009 | Msa0163160:intron | 35.0% |
| TCTGTTAACCCATAAGAGTT+TGG | + | chr1_4:41107063-41107082 | Msa0163160:intron | 35.0% | |
| GTCAGTAACCAAACTCTTAT+GGG | - | chr1_4:41107074-41107093 | None:intergenic | 35.0% | |
| ! | AACATGAAGTACCAAAGTGT+AGG | - | chr1_4:41107212-41107231 | None:intergenic | 35.0% |
| AGAAATTCACTAATCACGAC+AGG | - | chr1_4:41107384-41107403 | None:intergenic | 35.0% | |
| CTGTAAGGAAAGATTATAGC+TGG | + | chr1_4:41107402-41107421 | Msa0163160:intron | 35.0% | |
| TCATGATAAACTAGACCAAG+TGG | - | chr1_4:41107429-41107448 | None:intergenic | 35.0% | |
| !! | TTCTCATTTGGGTTGTATCT+AGG | + | chr1_4:41107453-41107472 | Msa0163160:intron | 35.0% |
| !! | ATTTGGGTTGTATCTAGGTA+AGG | + | chr1_4:41107458-41107477 | Msa0163160:intron | 35.0% |
| ! | AGAAGAAAGAGGTGTAACAA+GGG | - | chr1_4:41100654-41100673 | None:intergenic | 35.0% |
| ! | AATGCTTTCTGCACTTTTCT+AGG | + | chr1_4:41100921-41100940 | Msa0163160:intron | 35.0% |
| AAGATTGTGGGAAATGGTAA+AGG | - | chr1_4:41101000-41101019 | None:intergenic | 35.0% | |
| TCATGAAAGATTGTGGGAAA+TGG | - | chr1_4:41101006-41101025 | None:intergenic | 35.0% | |
| ACTTTCTTTCTTGCTTGGTT+TGG | + | chr1_4:41101205-41101224 | Msa0163160:intron | 35.0% | |
| !! | AGGATTGATTTGGTTTATGG+AGG | + | chr1_4:41101299-41101318 | Msa0163160:CDS | 35.0% |
| !! | ATTGATTTGGTTTATGGAGG+TGG | + | chr1_4:41101302-41101321 | Msa0163160:CDS | 35.0% |
| AAGAAACTAACCCAAGAACA+TGG | - | chr1_4:41101379-41101398 | None:intergenic | 35.0% | |
| TCATATCAGCATTAATGCAC+TGG | + | chr1_4:41101507-41101526 | Msa0163160:intron | 35.0% | |
| ! | GTATTTTCAACTACGGAGTT+CGG | - | chr1_4:41101554-41101573 | None:intergenic | 35.0% |
| ! | CTATGTGTTTGTTGGATGAA+AGG | + | chr1_4:41101658-41101677 | Msa0163160:intron | 35.0% |
| AGAAGCTTCTAAATGTAGGA+AGG | + | chr1_4:41101853-41101872 | Msa0163160:intron | 35.0% | |
| GAAGCTTCTAAATGTAGGAA+GGG | + | chr1_4:41101854-41101873 | Msa0163160:intron | 35.0% | |
| ! | GTTAAAAGGTGAATGCCTTT+TGG | + | chr1_4:41102034-41102053 | Msa0163160:intron | 35.0% |
| ! | TTTTACAGAAAGTTCATGCG+CGG | + | chr1_4:41102063-41102082 | Msa0163160:intron | 35.0% |
| AAAGGACAGCATTAACTCAA+TGG | - | chr1_4:41102369-41102388 | None:intergenic | 35.0% | |
| CTGTATCTGATATGCATCAA+AGG | + | chr1_4:41102517-41102536 | Msa0163160:CDS | 35.0% | |
| !!! | CTTCATCGGTTTTTGTTTAC+CGG | + | chr1_4:41102677-41102696 | Msa0163160:intron | 35.0% |
| CTTGGTTCAATGAAAGTCTT+TGG | - | chr1_4:41102767-41102786 | None:intergenic | 35.0% | |
| TTGAACCAAGACCATATTAG+AGG | + | chr1_4:41102777-41102796 | Msa0163160:intron | 35.0% | |
| GTGAAGTGGGATTCTTAATT+TGG | + | chr1_4:41102882-41102901 | Msa0163160:intron | 35.0% | |
| ATTATTACTTGGGCTCAACT+TGG | + | chr1_4:41102986-41103005 | Msa0163160:intron | 35.0% | |
| TTATTACTTGGGCTCAACTT+GGG | + | chr1_4:41102987-41103006 | Msa0163160:intron | 35.0% | |
| AAGAGTAGTATGGTTCTTAC+CGG | - | chr1_4:41103025-41103044 | None:intergenic | 35.0% | |
| ACTTCTTTGGTTATAGTTGG+GGG | + | chr1_4:41103223-41103242 | Msa0163160:intron | 35.0% | |
| GTATGACATGCATCATAGAT+AGG | - | chr1_4:41103571-41103590 | None:intergenic | 35.0% | |
| TAATTGAACCGAAACATGTG+GGG | + | chr1_4:41103768-41103787 | Msa0163160:intron | 35.0% | |
| ATTCAATACCCCACATGTTT+CGG | - | chr1_4:41103779-41103798 | None:intergenic | 35.0% | |
| ! | TTGATGGTTCTCCATTTGAA+TGG | + | chr1_4:41103890-41103909 | Msa0163160:intron | 35.0% |
| TGATGGTTCTCCATTTGAAT+GGG | + | chr1_4:41103891-41103910 | Msa0163160:intron | 35.0% | |
| CCATTGACCAACAACTTTAT+TGG | - | chr1_4:41103987-41104006 | None:intergenic | 35.0% | |
| CCAATAAAGTTGTTGGTCAA+TGG | + | chr1_4:41103984-41104003 | Msa0163160:intron | 35.0% | |
| ! | ACATTTTTGTCGGTAGTCAT+CGG | + | chr1_4:41104055-41104074 | Msa0163160:intron | 35.0% |
| GGAAATAAAGCCTTCATCAA+CGG | - | chr1_4:41104393-41104412 | None:intergenic | 35.0% | |
| GATACATATTCATCTTGCTC+AGG | - | chr1_4:41104688-41104707 | None:intergenic | 35.0% | |
| !! | AATATGTATCCAAGTTGGTG+TGG | + | chr1_4:41104698-41104717 | Msa0163160:CDS | 35.0% |
| !! | ATATGTATCCAAGTTGGTGT+GGG | + | chr1_4:41104699-41104718 | Msa0163160:CDS | 35.0% |
| !!! | GGTCCTTGTCTTTGTTTTTT+GGG | + | chr1_4:41104821-41104840 | Msa0163160:intron | 35.0% |
| !!! | GTCCTTGTCTTTGTTTTTTG+GGG | + | chr1_4:41104822-41104841 | Msa0163160:intron | 35.0% |
| !!! | ATCAATGGTTTTGGATATGG+AGG | - | chr1_4:41105343-41105362 | None:intergenic | 35.0% |
| ! | TTACATCGGATCAATGGTTT+TGG | - | chr1_4:41105352-41105371 | None:intergenic | 35.0% |
| TTGAGTTTACATCGGATCAA+TGG | - | chr1_4:41105358-41105377 | None:intergenic | 35.0% | |
| ACCACACATTGAGTTTACAT+CGG | - | chr1_4:41105366-41105385 | None:intergenic | 35.0% | |
| !! | GTCGGTTGATTGATTTGTTA+TGG | + | chr1_4:41105545-41105564 | Msa0163160:intron | 35.0% |
| CAAATATCCAACATAAGTGG+AGG | - | chr1_4:41105646-41105665 | None:intergenic | 35.0% | |
| ! | ACGCACGCGTTTTATATTTA+AGG | + | chr1_4:41105773-41105792 | Msa0163160:intron | 35.0% |
| ATCCACGCATTTATTCTTGT+TGG | + | chr1_4:41105797-41105816 | Msa0163160:intron | 35.0% | |
| !! | TCTACTTTGGAAAGTTTTGG+AGG | + | chr1_4:41105879-41105898 | Msa0163160:intron | 35.0% |
| !!! | AGTTTCCTTTTCTGGTTCTA+TGG | + | chr1_4:41105940-41105959 | Msa0163160:intron | 35.0% |
| ACAATCCATAGAACCAGAAA+AGG | - | chr1_4:41105948-41105967 | None:intergenic | 35.0% | |
| ! | TGGTTCTATGGATTGTGAAA+TGG | + | chr1_4:41105952-41105971 | Msa0163160:intron | 35.0% |
| TTGTTGGACTTCAGAACAAA+CGG | - | chr1_4:41105982-41106001 | None:intergenic | 35.0% | |
| AGAATCATAGGGGTTATGAT+TGG | + | chr1_4:41106295-41106314 | Msa0163160:intron | 35.0% | |
| GAATCATAGGGGTTATGATT+GGG | + | chr1_4:41106296-41106315 | Msa0163160:intron | 35.0% | |
| ! | TTCCTAGGTTGAAGTCAATA+CGG | + | chr1_4:41106354-41106373 | Msa0163160:intron | 35.0% |
| ATAGGTCTTTAGTGGAAACA+AGG | + | chr1_4:41106384-41106403 | Msa0163160:intron | 35.0% | |
| ! | AAGGTGTTTGCTAGAGAATA+AGG | + | chr1_4:41106403-41106422 | Msa0163160:intron | 35.0% |
| ATAACAGACAAGCAAGTGAA+AGG | - | chr1_4:41106513-41106532 | None:intergenic | 35.0% | |
| ! | TGTTTTTCTATGACTGGTGT+TGG | + | chr1_4:41106591-41106610 | Msa0163160:intron | 35.0% |
| ! | TGTTCTTAGTTCTCGATTGT+GGG | + | chr1_4:41106727-41106746 | Msa0163160:intron | 35.0% |
| AGTAGATTGGAACAATCTGA+CGG | - | chr1_4:41106851-41106870 | None:intergenic | 35.0% | |
| AACAACAAGCATCAGTAGAT+TGG | - | chr1_4:41106864-41106883 | None:intergenic | 35.0% | |
| ! | ACTTAAGACTCATTTTGCAG+TGG | + | chr1_4:41106990-41107009 | Msa0163160:intron | 35.0% |
| TCTGTTAACCCATAAGAGTT+TGG | + | chr1_4:41107063-41107082 | Msa0163160:intron | 35.0% | |
| GTCAGTAACCAAACTCTTAT+GGG | - | chr1_4:41107074-41107093 | None:intergenic | 35.0% | |
| ! | AACATGAAGTACCAAAGTGT+AGG | - | chr1_4:41107212-41107231 | None:intergenic | 35.0% |
| AGAAATTCACTAATCACGAC+AGG | - | chr1_4:41107384-41107403 | None:intergenic | 35.0% | |
| CTGTAAGGAAAGATTATAGC+TGG | + | chr1_4:41107402-41107421 | Msa0163160:intron | 35.0% | |
| TCATGATAAACTAGACCAAG+TGG | - | chr1_4:41107429-41107448 | None:intergenic | 35.0% | |
| !! | TTCTCATTTGGGTTGTATCT+AGG | + | chr1_4:41107453-41107472 | Msa0163160:intron | 35.0% |
| !! | ATTTGGGTTGTATCTAGGTA+AGG | + | chr1_4:41107458-41107477 | Msa0163160:intron | 35.0% |
| AAGAGGATTTGTGTCTACTG+TGG | + | chr1_4:41100345-41100364 | Msa0163160:CDS | 40.0% | |
| ! | GAGAAGAAAGAGGTGTAACA+AGG | - | chr1_4:41100655-41100674 | None:intergenic | 40.0% |
| CAATGTTGAAGGTTGAGAGA+AGG | + | chr1_4:41101279-41101298 | Msa0163160:intron | 40.0% | |
| GGTTGAGAGAAGGATTGATT+TGG | + | chr1_4:41101289-41101308 | Msa0163160:intron | 40.0% | |
| GTTTCTCAAGCAGTTCATGA+TGG | + | chr1_4:41101347-41101366 | Msa0163160:CDS | 40.0% | |
| ATTTCTTAGGGAACAGGCAT+GGG | - | chr1_4:41101748-41101767 | None:intergenic | 40.0% | |
| AATTTCTTAGGGAACAGGCA+TGG | - | chr1_4:41101749-41101768 | None:intergenic | 40.0% | |
| TTTACAGAAAGTTCATGCGC+GGG | + | chr1_4:41102064-41102083 | Msa0163160:intron | 40.0% | |
| GCATGCAAGTGAAAAGGAAA+AGG | - | chr1_4:41102110-41102129 | None:intergenic | 40.0% | |
| CAAAGTGCATGCAAGTGAAA+AGG | - | chr1_4:41102116-41102135 | None:intergenic | 40.0% | |
| GTTTATGCAGTGTTATCCCT+AGG | + | chr1_4:41102320-41102339 | Msa0163160:intron | 40.0% | |
| ACTCAATGGTTTACCTCTCT+TGG | - | chr1_4:41102355-41102374 | None:intergenic | 40.0% | |
| GATCTTATTGCAACGAGCAA+AGG | - | chr1_4:41102387-41102406 | None:intergenic | 40.0% | |
| TGGTCGAAAATGCAGATAAC+TGG | + | chr1_4:41102471-41102490 | Msa0163160:intron | 40.0% | |
| AGATAACTGGTGACCCTATT+GGG | + | chr1_4:41102484-41102503 | Msa0163160:intron | 40.0% | |
| GCATCAAAGGAAAGCTGAAA+TGG | + | chr1_4:41102530-41102549 | Msa0163160:CDS | 40.0% | |
| AAAGGAAAGCTGAAATGGCT+AGG | + | chr1_4:41102535-41102554 | Msa0163160:CDS | 40.0% | |
| CCAAGATTTCATACCAGGAA+GGG | - | chr1_4:41102580-41102599 | None:intergenic | 40.0% | |
| TGTAGCCAAGATTTCATACC+AGG | - | chr1_4:41102585-41102604 | None:intergenic | 40.0% | |
| AAATGGTCAATTCGACACGT+GGG | - | chr1_4:41102648-41102667 | None:intergenic | 40.0% | |
| AAAATGGTCAATTCGACACG+TGG | - | chr1_4:41102649-41102668 | None:intergenic | 40.0% | |
| CATGTGGATCTGGTAAAATC+CGG | - | chr1_4:41102699-41102718 | None:intergenic | 40.0% | |
| ! | GATTTTACCAGATCCACATG+TGG | + | chr1_4:41102699-41102718 | Msa0163160:intron | 40.0% |
| ATCCACATGTGGACCATATA+TGG | + | chr1_4:41102710-41102729 | Msa0163160:intron | 40.0% | |
| TGAAGCCTCTAATATGGTCT+TGG | - | chr1_4:41102785-41102804 | None:intergenic | 40.0% | |
| AGAGCATACTCATGTGAAGT+AGG | + | chr1_4:41102849-41102868 | Msa0163160:intron | 40.0% | |
| TAACTAGAGACATGCCTGAA+AGG | + | chr1_4:41103326-41103345 | Msa0163160:intron | 40.0% | |
| TTATTCCATTCCCACCTTTC+AGG | - | chr1_4:41103343-41103362 | None:intergenic | 40.0% | |
| AATTCCAGAGAGTTCACAAG+AGG | - | chr1_4:41103426-41103445 | None:intergenic | 40.0% | |
| ! | ATAGGAGGCAAAGTTGGTTA+AGG | - | chr1_4:41103553-41103572 | None:intergenic | 40.0% |
| TCATAGATAGGAGGCAAAGT+TGG | - | chr1_4:41103559-41103578 | None:intergenic | 40.0% | |
| TGACATGCATCATAGATAGG+AGG | - | chr1_4:41103568-41103587 | None:intergenic | 40.0% | |
| !! | TGAAGGCTTTATTTCCCCAA+AGG | + | chr1_4:41104397-41104416 | Msa0163160:CDS | 40.0% |
| TAATCCCCTAACCAATTCCT+TGG | - | chr1_4:41104453-41104472 | None:intergenic | 40.0% | |
| AAGTGAAGATGGTTGAGCAA+TGG | - | chr1_4:41104493-41104512 | None:intergenic | 40.0% | |
| TCACATGGCAACTTCTGATT+CGG | - | chr1_4:41104746-41104765 | None:intergenic | 40.0% | |
| ! | TAAGACTAGTGGGCAATTGA+TGG | + | chr1_4:41104776-41104795 | Msa0163160:intron | 40.0% |
| !!! | GGGTCCTTGTCTTTGTTTTT+TGG | + | chr1_4:41104820-41104839 | Msa0163160:intron | 40.0% |
| GACCCCAAAAAACAAAGACA+AGG | - | chr1_4:41104827-41104846 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTGGATATGGAGGA+AGG | - | chr1_4:41105339-41105358 | None:intergenic | 40.0% |
| !!! | CGGATCAATGGTTTTGGATA+TGG | - | chr1_4:41105346-41105365 | None:intergenic | 40.0% |
| TCCGATGTAAACTCAATGTG+TGG | + | chr1_4:41105362-41105381 | Msa0163160:intron | 40.0% | |
| GATGTAAACTCAATGTGTGG+TGG | + | chr1_4:41105365-41105384 | Msa0163160:intron | 40.0% | |
| AGAAGTCCTCAGATCCAATT+TGG | + | chr1_4:41105456-41105475 | Msa0163160:intron | 40.0% | |
| GAAGTCCTCAGATCCAATTT+GGG | + | chr1_4:41105457-41105476 | Msa0163160:intron | 40.0% | |
| AATCACCCAAATTGGATCTG+AGG | - | chr1_4:41105465-41105484 | None:intergenic | 40.0% | |
| CAAATCAATCAACCGACAGT+TGG | - | chr1_4:41105542-41105561 | None:intergenic | 40.0% | |
| ! | GTTATGGTTTGAGGTTGTTG+TGG | + | chr1_4:41105561-41105580 | Msa0163160:intron | 40.0% |
| TAAAACGCGTGCGTAAATCA+AGG | - | chr1_4:41105767-41105786 | None:intergenic | 40.0% | |
| GACCAACAAGAATAAATGCG+TGG | - | chr1_4:41105802-41105821 | None:intergenic | 40.0% | |
| GCATCAAGATGATACACGAA+AGG | - | chr1_4:41106120-41106139 | None:intergenic | 40.0% | |
| TACACCAAAGCTGTGAAACA+CGG | + | chr1_4:41106219-41106238 | Msa0163160:intron | 40.0% | |
| !! | GTTGTAGGTAGCTTGTTAGA+AGG | + | chr1_4:41106241-41106260 | Msa0163160:intron | 40.0% |
| TGAGATAGGATCTCAGATCT+AGG | + | chr1_4:41106329-41106348 | Msa0163160:intron | 40.0% | |
| ! | TCCTAGGTTGAAGTCAATAC+GGG | + | chr1_4:41106355-41106374 | Msa0163160:intron | 40.0% |
| GAGAATAAGGACTACACTAG+TGG | + | chr1_4:41106416-41106435 | Msa0163160:intron | 40.0% | |
| !! | ACACTAGTGGATTTCCTTCA+TGG | + | chr1_4:41106429-41106448 | Msa0163160:intron | 40.0% |
| ! | CTGATGATGTCGAAGTTCTT+TGG | + | chr1_4:41106663-41106682 | Msa0163160:intron | 40.0% |
| AAAACCACGAGAACCCAATA+AGG | - | chr1_4:41106700-41106719 | None:intergenic | 40.0% | |
| ! | TTATTGGGTTCTCGTGGTTT+TGG | + | chr1_4:41106699-41106718 | Msa0163160:intron | 40.0% |
| ! | TATTGGGTTCTCGTGGTTTT+GGG | + | chr1_4:41106700-41106719 | Msa0163160:intron | 40.0% |
| ! | CTGTTCTTAGTTCTCGATTG+TGG | + | chr1_4:41106726-41106745 | Msa0163160:intron | 40.0% |
| !! | TCTACTGATGCTTGTTGTTG+TGG | + | chr1_4:41106865-41106884 | Msa0163160:intron | 40.0% |
| CGTCAGTAACCAAACTCTTA+TGG | - | chr1_4:41107075-41107094 | None:intergenic | 40.0% | |
| GAGTTTGGTTACTGACGTAT+TGG | + | chr1_4:41107078-41107097 | Msa0163160:intron | 40.0% | |
| ! | TTTTACGCGTCTGTGGTATT+TGG | + | chr1_4:41107121-41107140 | Msa0163160:intron | 40.0% |
| TTGAAACTTGTAGGCAGATC+TGG | - | chr1_4:41107176-41107195 | None:intergenic | 40.0% | |
| AGATCTGCCTACAAGTTTCA+AGG | + | chr1_4:41107175-41107194 | Msa0163160:intron | 40.0% | |
| CATGATGCCTTGAAACTTGT+AGG | - | chr1_4:41107185-41107204 | None:intergenic | 40.0% | |
| CATCATGTCTACCTACACTT+TGG | + | chr1_4:41107198-41107217 | Msa0163160:intron | 40.0% | |
| ! | TGCTTTGTTCAGTGAGATGT+TGG | + | chr1_4:41107253-41107272 | Msa0163160:intron | 40.0% |
| AAGATTATAGCTGGTCCACT+TGG | + | chr1_4:41107411-41107430 | Msa0163160:intron | 40.0% | |
| TCTAATGTTCCCTCAATCCT+GGG | + | chr1_4:41107481-41107500 | Msa0163160:intron | 40.0% | |
| AACAAAGGTTGAGACTGTGA+CGG | - | chr1_4:41107852-41107871 | None:intergenic | 40.0% | |
| AAGAGGATTTGTGTCTACTG+TGG | + | chr1_4:41100345-41100364 | Msa0163160:CDS | 40.0% | |
| ! | GAGAAGAAAGAGGTGTAACA+AGG | - | chr1_4:41100655-41100674 | None:intergenic | 40.0% |
| CAATGTTGAAGGTTGAGAGA+AGG | + | chr1_4:41101279-41101298 | Msa0163160:intron | 40.0% | |
| GGTTGAGAGAAGGATTGATT+TGG | + | chr1_4:41101289-41101308 | Msa0163160:intron | 40.0% | |
| GTTTCTCAAGCAGTTCATGA+TGG | + | chr1_4:41101347-41101366 | Msa0163160:CDS | 40.0% | |
| ATTTCTTAGGGAACAGGCAT+GGG | - | chr1_4:41101748-41101767 | None:intergenic | 40.0% | |
| AATTTCTTAGGGAACAGGCA+TGG | - | chr1_4:41101749-41101768 | None:intergenic | 40.0% | |
| TTTACAGAAAGTTCATGCGC+GGG | + | chr1_4:41102064-41102083 | Msa0163160:intron | 40.0% | |
| GCATGCAAGTGAAAAGGAAA+AGG | - | chr1_4:41102110-41102129 | None:intergenic | 40.0% | |
| CAAAGTGCATGCAAGTGAAA+AGG | - | chr1_4:41102116-41102135 | None:intergenic | 40.0% | |
| GTTTATGCAGTGTTATCCCT+AGG | + | chr1_4:41102320-41102339 | Msa0163160:intron | 40.0% | |
| ACTCAATGGTTTACCTCTCT+TGG | - | chr1_4:41102355-41102374 | None:intergenic | 40.0% | |
| GATCTTATTGCAACGAGCAA+AGG | - | chr1_4:41102387-41102406 | None:intergenic | 40.0% | |
| TGGTCGAAAATGCAGATAAC+TGG | + | chr1_4:41102471-41102490 | Msa0163160:intron | 40.0% | |
| AGATAACTGGTGACCCTATT+GGG | + | chr1_4:41102484-41102503 | Msa0163160:intron | 40.0% | |
| GCATCAAAGGAAAGCTGAAA+TGG | + | chr1_4:41102530-41102549 | Msa0163160:CDS | 40.0% | |
| AAAGGAAAGCTGAAATGGCT+AGG | + | chr1_4:41102535-41102554 | Msa0163160:CDS | 40.0% | |
| CCAAGATTTCATACCAGGAA+GGG | - | chr1_4:41102580-41102599 | None:intergenic | 40.0% | |
| TGTAGCCAAGATTTCATACC+AGG | - | chr1_4:41102585-41102604 | None:intergenic | 40.0% | |
| AAATGGTCAATTCGACACGT+GGG | - | chr1_4:41102648-41102667 | None:intergenic | 40.0% | |
| AAAATGGTCAATTCGACACG+TGG | - | chr1_4:41102649-41102668 | None:intergenic | 40.0% | |
| CATGTGGATCTGGTAAAATC+CGG | - | chr1_4:41102699-41102718 | None:intergenic | 40.0% | |
| ! | GATTTTACCAGATCCACATG+TGG | + | chr1_4:41102699-41102718 | Msa0163160:intron | 40.0% |
| ATCCACATGTGGACCATATA+TGG | + | chr1_4:41102710-41102729 | Msa0163160:intron | 40.0% | |
| TGAAGCCTCTAATATGGTCT+TGG | - | chr1_4:41102785-41102804 | None:intergenic | 40.0% | |
| AGAGCATACTCATGTGAAGT+AGG | + | chr1_4:41102849-41102868 | Msa0163160:intron | 40.0% | |
| TAACTAGAGACATGCCTGAA+AGG | + | chr1_4:41103326-41103345 | Msa0163160:intron | 40.0% | |
| TTATTCCATTCCCACCTTTC+AGG | - | chr1_4:41103343-41103362 | None:intergenic | 40.0% | |
| AATTCCAGAGAGTTCACAAG+AGG | - | chr1_4:41103426-41103445 | None:intergenic | 40.0% | |
| ! | ATAGGAGGCAAAGTTGGTTA+AGG | - | chr1_4:41103553-41103572 | None:intergenic | 40.0% |
| TCATAGATAGGAGGCAAAGT+TGG | - | chr1_4:41103559-41103578 | None:intergenic | 40.0% | |
| TGACATGCATCATAGATAGG+AGG | - | chr1_4:41103568-41103587 | None:intergenic | 40.0% | |
| !! | TGAAGGCTTTATTTCCCCAA+AGG | + | chr1_4:41104397-41104416 | Msa0163160:CDS | 40.0% |
| TAATCCCCTAACCAATTCCT+TGG | - | chr1_4:41104453-41104472 | None:intergenic | 40.0% | |
| AAGTGAAGATGGTTGAGCAA+TGG | - | chr1_4:41104493-41104512 | None:intergenic | 40.0% | |
| TCACATGGCAACTTCTGATT+CGG | - | chr1_4:41104746-41104765 | None:intergenic | 40.0% | |
| ! | TAAGACTAGTGGGCAATTGA+TGG | + | chr1_4:41104776-41104795 | Msa0163160:intron | 40.0% |
| !!! | GGGTCCTTGTCTTTGTTTTT+TGG | + | chr1_4:41104820-41104839 | Msa0163160:intron | 40.0% |
| GACCCCAAAAAACAAAGACA+AGG | - | chr1_4:41104827-41104846 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTGGATATGGAGGA+AGG | - | chr1_4:41105339-41105358 | None:intergenic | 40.0% |
| !!! | CGGATCAATGGTTTTGGATA+TGG | - | chr1_4:41105346-41105365 | None:intergenic | 40.0% |
| TCCGATGTAAACTCAATGTG+TGG | + | chr1_4:41105362-41105381 | Msa0163160:intron | 40.0% | |
| GATGTAAACTCAATGTGTGG+TGG | + | chr1_4:41105365-41105384 | Msa0163160:intron | 40.0% | |
| AGAAGTCCTCAGATCCAATT+TGG | + | chr1_4:41105456-41105475 | Msa0163160:intron | 40.0% | |
| GAAGTCCTCAGATCCAATTT+GGG | + | chr1_4:41105457-41105476 | Msa0163160:intron | 40.0% | |
| AATCACCCAAATTGGATCTG+AGG | - | chr1_4:41105465-41105484 | None:intergenic | 40.0% | |
| CAAATCAATCAACCGACAGT+TGG | - | chr1_4:41105542-41105561 | None:intergenic | 40.0% | |
| ! | GTTATGGTTTGAGGTTGTTG+TGG | + | chr1_4:41105561-41105580 | Msa0163160:intron | 40.0% |
| TAAAACGCGTGCGTAAATCA+AGG | - | chr1_4:41105767-41105786 | None:intergenic | 40.0% | |
| GACCAACAAGAATAAATGCG+TGG | - | chr1_4:41105802-41105821 | None:intergenic | 40.0% | |
| GCATCAAGATGATACACGAA+AGG | - | chr1_4:41106120-41106139 | None:intergenic | 40.0% | |
| TACACCAAAGCTGTGAAACA+CGG | + | chr1_4:41106219-41106238 | Msa0163160:intron | 40.0% | |
| !! | GTTGTAGGTAGCTTGTTAGA+AGG | + | chr1_4:41106241-41106260 | Msa0163160:intron | 40.0% |
| TGAGATAGGATCTCAGATCT+AGG | + | chr1_4:41106329-41106348 | Msa0163160:intron | 40.0% | |
| ! | TCCTAGGTTGAAGTCAATAC+GGG | + | chr1_4:41106355-41106374 | Msa0163160:intron | 40.0% |
| GAGAATAAGGACTACACTAG+TGG | + | chr1_4:41106416-41106435 | Msa0163160:intron | 40.0% | |
| !! | ACACTAGTGGATTTCCTTCA+TGG | + | chr1_4:41106429-41106448 | Msa0163160:intron | 40.0% |
| ! | CTGATGATGTCGAAGTTCTT+TGG | + | chr1_4:41106663-41106682 | Msa0163160:intron | 40.0% |
| AAAACCACGAGAACCCAATA+AGG | - | chr1_4:41106700-41106719 | None:intergenic | 40.0% | |
| ! | TTATTGGGTTCTCGTGGTTT+TGG | + | chr1_4:41106699-41106718 | Msa0163160:intron | 40.0% |
| ! | TATTGGGTTCTCGTGGTTTT+GGG | + | chr1_4:41106700-41106719 | Msa0163160:intron | 40.0% |
| ! | CTGTTCTTAGTTCTCGATTG+TGG | + | chr1_4:41106726-41106745 | Msa0163160:intron | 40.0% |
| !! | TCTACTGATGCTTGTTGTTG+TGG | + | chr1_4:41106865-41106884 | Msa0163160:intron | 40.0% |
| CGTCAGTAACCAAACTCTTA+TGG | - | chr1_4:41107075-41107094 | None:intergenic | 40.0% | |
| GAGTTTGGTTACTGACGTAT+TGG | + | chr1_4:41107078-41107097 | Msa0163160:intron | 40.0% | |
| ! | TTTTACGCGTCTGTGGTATT+TGG | + | chr1_4:41107121-41107140 | Msa0163160:intron | 40.0% |
| TTGAAACTTGTAGGCAGATC+TGG | - | chr1_4:41107176-41107195 | None:intergenic | 40.0% | |
| AGATCTGCCTACAAGTTTCA+AGG | + | chr1_4:41107175-41107194 | Msa0163160:intron | 40.0% | |
| CATGATGCCTTGAAACTTGT+AGG | - | chr1_4:41107185-41107204 | None:intergenic | 40.0% | |
| CATCATGTCTACCTACACTT+TGG | + | chr1_4:41107198-41107217 | Msa0163160:intron | 40.0% | |
| ! | TGCTTTGTTCAGTGAGATGT+TGG | + | chr1_4:41107253-41107272 | Msa0163160:intron | 40.0% |
| AAGATTATAGCTGGTCCACT+TGG | + | chr1_4:41107411-41107430 | Msa0163160:intron | 40.0% | |
| TCTAATGTTCCCTCAATCCT+GGG | + | chr1_4:41107481-41107500 | Msa0163160:intron | 40.0% | |
| AACAAAGGTTGAGACTGTGA+CGG | - | chr1_4:41107852-41107871 | None:intergenic | 40.0% | |
| TCTACTGTGGTAGCAGTTCA+GGG | + | chr1_4:41100358-41100377 | Msa0163160:CDS | 45.0% | |
| ACAGCAGCTTCTTGGTAAGT+AGG | - | chr1_4:41100390-41100409 | None:intergenic | 45.0% | |
| CTAGTTCAACAGCAGCTTCT+TGG | - | chr1_4:41100398-41100417 | None:intergenic | 45.0% | |
| AATAGGTAGCCCTTGGCTAT+AGG | - | chr1_4:41101036-41101055 | None:intergenic | 45.0% | |
| ! | GTTTATGGAGGTGGTAGTGT+GGG | + | chr1_4:41101311-41101330 | Msa0163160:CDS | 45.0% |
| TCTCAAGCAGTTCATGATGG+TGG | + | chr1_4:41101350-41101369 | Msa0163160:CDS | 45.0% | |
| CAGATAACTGGTGACCCTAT+TGG | + | chr1_4:41102483-41102502 | Msa0163160:intron | 45.0% | |
| GATAACTGGTGACCCTATTG+GGG | + | chr1_4:41102485-41102504 | Msa0163160:intron | 45.0% | |
| CCCTTCCTGGTATGAAATCT+TGG | + | chr1_4:41102577-41102596 | Msa0163160:intron | 45.0% | |
| GCCAAGATTTCATACCAGGA+AGG | - | chr1_4:41102581-41102600 | None:intergenic | 45.0% | |
| ATATGGTCCACATGTGGATC+TGG | - | chr1_4:41102709-41102728 | None:intergenic | 45.0% | |
| GTCCATATATGGTCCACATG+TGG | - | chr1_4:41102715-41102734 | None:intergenic | 45.0% | |
| CATGTGGACCATATATGGAC+CGG | + | chr1_4:41102715-41102734 | Msa0163160:intron | 45.0% | |
| CAACAACTGTTGTAGCAGAC+CGG | - | chr1_4:41102737-41102756 | None:intergenic | 45.0% | |
| TGGAACCCTTGAAGAATTGC+TGG | + | chr1_4:41102961-41102980 | Msa0163160:intron | 45.0% | |
| TAGAGACATGCCTGAAAGGT+GGG | + | chr1_4:41103330-41103349 | Msa0163160:intron | 45.0% | |
| GTGGGTCTATTGAATGTGGA+TGG | + | chr1_4:41104332-41104351 | Msa0163160:CDS | 45.0% | |
| ! | ATTGACAAGGCCGTTGATGA+AGG | + | chr1_4:41104380-41104399 | Msa0163160:intron | 45.0% |
| CACAGCCAAGGAATTGGTTA+GGG | + | chr1_4:41104445-41104464 | Msa0163160:CDS | 45.0% | |
| ACAGCCAAGGAATTGGTTAG+GGG | + | chr1_4:41104446-41104465 | Msa0163160:CDS | 45.0% | |
| GGAATTGGTTAGGGGATTAG+AGG | + | chr1_4:41104454-41104473 | Msa0163160:CDS | 45.0% | |
| TCTTTCTTCCCACACCAACT+TGG | - | chr1_4:41104710-41104729 | None:intergenic | 45.0% | |
| CACATGGCAACTTCTGATTC+GGG | - | chr1_4:41104745-41104764 | None:intergenic | 45.0% | |
| ! | GGGGCATCATCAACATTAGT+TGG | - | chr1_4:41104939-41104958 | None:intergenic | 45.0% |
| ! | GGACTTCTGATCTGAAACAG+AGG | - | chr1_4:41105444-41105463 | None:intergenic | 45.0% |
| GAGCTTGCAATCACCCAAAT+TGG | - | chr1_4:41105473-41105492 | None:intergenic | 45.0% | |
| TTGGGTGATTGCAAGCTCTA+TGG | + | chr1_4:41105475-41105494 | Msa0163160:intron | 45.0% | |
| TGCAAGCTCTATGGTTTGAG+TGG | + | chr1_4:41105484-41105503 | Msa0163160:intron | 45.0% | |
| ! | ATGGTTTGAGGTTGTTGTGG+TGG | + | chr1_4:41105564-41105583 | Msa0163160:intron | 45.0% |
| ! | TGGTTTGAGGTTGTTGTGGT+GGG | + | chr1_4:41105565-41105584 | Msa0163160:intron | 45.0% |
| !!! | GGAAAGTTTTGGAGGTGATC+AGG | + | chr1_4:41105887-41105906 | Msa0163160:intron | 45.0% |
| TACGGGTCAGAACAACTTGT+TGG | - | chr1_4:41105998-41106017 | None:intergenic | 45.0% | |
| ACAACCGTGTTTCACAGCTT+TGG | - | chr1_4:41106226-41106245 | None:intergenic | 45.0% | |
| AAGCTGTGAAACACGGTTGT+AGG | + | chr1_4:41106226-41106245 | Msa0163160:intron | 45.0% | |
| ! | AGGGGTTATGATTGGGTTGT+AGG | + | chr1_4:41106303-41106322 | Msa0163160:intron | 45.0% |
| ! | GGGGTTATGATTGGGTTGTA+GGG | + | chr1_4:41106304-41106323 | Msa0163160:intron | 45.0% |
| TCTCAGATCTAGGAGTTCCT+AGG | + | chr1_4:41106339-41106358 | Msa0163160:intron | 45.0% | |
| !! | ACCCGTATTGACTTCAACCT+AGG | - | chr1_4:41106359-41106378 | None:intergenic | 45.0% |
| AGGTTGAAGTCAATACGGGT+AGG | + | chr1_4:41106359-41106378 | Msa0163160:intron | 45.0% | |
| AGTCAATACGGGTAGGTCAT+AGG | + | chr1_4:41106366-41106385 | Msa0163160:intron | 45.0% | |
| GGTAGGTCATAGGTCTTTAG+TGG | + | chr1_4:41106376-41106395 | Msa0163160:intron | 45.0% | |
| ! | AGTGGATTTCCTTCATGGCT+TGG | + | chr1_4:41106434-41106453 | Msa0163160:intron | 45.0% |
| !! | ATTGGGTTCTCGTGGTTTTG+GGG | + | chr1_4:41106701-41106720 | Msa0163160:intron | 45.0% |
| ! | TCTTAGTTCTCGATTGTGGG+CGG | + | chr1_4:41106730-41106749 | Msa0163160:intron | 45.0% |
| !! | TTTTGAGAGCGAACTGCTGT+CGG | + | chr1_4:41106791-41106810 | Msa0163160:intron | 45.0% |
| !! | ACTGATGCTTGTTGTTGTGG+TGG | + | chr1_4:41106868-41106887 | Msa0163160:intron | 45.0% |
| ATTGGACTCATCCGTCAATC+TGG | + | chr1_4:41107096-41107115 | Msa0163160:intron | 45.0% | |
| TTGGACTCATCCGTCAATCT+GGG | + | chr1_4:41107097-41107116 | Msa0163160:intron | 45.0% | |
| CGCGTAAAAACCCAGATTGA+CGG | - | chr1_4:41107110-41107129 | None:intergenic | 45.0% | |
| GTCTAATGTTCCCTCAATCC+TGG | + | chr1_4:41107480-41107499 | Msa0163160:intron | 45.0% | |
| ATGCATGTTGGCACATGTGT+GGG | + | chr1_4:41107508-41107527 | Msa0163160:intron | 45.0% | |
| TCTACTGTGGTAGCAGTTCA+GGG | + | chr1_4:41100358-41100377 | Msa0163160:CDS | 45.0% | |
| ACAGCAGCTTCTTGGTAAGT+AGG | - | chr1_4:41100390-41100409 | None:intergenic | 45.0% | |
| CTAGTTCAACAGCAGCTTCT+TGG | - | chr1_4:41100398-41100417 | None:intergenic | 45.0% | |
| AATAGGTAGCCCTTGGCTAT+AGG | - | chr1_4:41101036-41101055 | None:intergenic | 45.0% | |
| ! | GTTTATGGAGGTGGTAGTGT+GGG | + | chr1_4:41101311-41101330 | Msa0163160:CDS | 45.0% |
| TCTCAAGCAGTTCATGATGG+TGG | + | chr1_4:41101350-41101369 | Msa0163160:CDS | 45.0% | |
| CAGATAACTGGTGACCCTAT+TGG | + | chr1_4:41102483-41102502 | Msa0163160:intron | 45.0% | |
| GATAACTGGTGACCCTATTG+GGG | + | chr1_4:41102485-41102504 | Msa0163160:intron | 45.0% | |
| CCCTTCCTGGTATGAAATCT+TGG | + | chr1_4:41102577-41102596 | Msa0163160:intron | 45.0% | |
| GCCAAGATTTCATACCAGGA+AGG | - | chr1_4:41102581-41102600 | None:intergenic | 45.0% | |
| ATATGGTCCACATGTGGATC+TGG | - | chr1_4:41102709-41102728 | None:intergenic | 45.0% | |
| GTCCATATATGGTCCACATG+TGG | - | chr1_4:41102715-41102734 | None:intergenic | 45.0% | |
| CATGTGGACCATATATGGAC+CGG | + | chr1_4:41102715-41102734 | Msa0163160:intron | 45.0% | |
| CAACAACTGTTGTAGCAGAC+CGG | - | chr1_4:41102737-41102756 | None:intergenic | 45.0% | |
| TGGAACCCTTGAAGAATTGC+TGG | + | chr1_4:41102961-41102980 | Msa0163160:intron | 45.0% | |
| TAGAGACATGCCTGAAAGGT+GGG | + | chr1_4:41103330-41103349 | Msa0163160:intron | 45.0% | |
| GTGGGTCTATTGAATGTGGA+TGG | + | chr1_4:41104332-41104351 | Msa0163160:CDS | 45.0% | |
| ! | ATTGACAAGGCCGTTGATGA+AGG | + | chr1_4:41104380-41104399 | Msa0163160:intron | 45.0% |
| CACAGCCAAGGAATTGGTTA+GGG | + | chr1_4:41104445-41104464 | Msa0163160:CDS | 45.0% | |
| ACAGCCAAGGAATTGGTTAG+GGG | + | chr1_4:41104446-41104465 | Msa0163160:CDS | 45.0% | |
| GGAATTGGTTAGGGGATTAG+AGG | + | chr1_4:41104454-41104473 | Msa0163160:CDS | 45.0% | |
| TCTTTCTTCCCACACCAACT+TGG | - | chr1_4:41104710-41104729 | None:intergenic | 45.0% | |
| CACATGGCAACTTCTGATTC+GGG | - | chr1_4:41104745-41104764 | None:intergenic | 45.0% | |
| ! | GGGGCATCATCAACATTAGT+TGG | - | chr1_4:41104939-41104958 | None:intergenic | 45.0% |
| ! | GGACTTCTGATCTGAAACAG+AGG | - | chr1_4:41105444-41105463 | None:intergenic | 45.0% |
| GAGCTTGCAATCACCCAAAT+TGG | - | chr1_4:41105473-41105492 | None:intergenic | 45.0% | |
| TTGGGTGATTGCAAGCTCTA+TGG | + | chr1_4:41105475-41105494 | Msa0163160:intron | 45.0% | |
| TGCAAGCTCTATGGTTTGAG+TGG | + | chr1_4:41105484-41105503 | Msa0163160:intron | 45.0% | |
| ! | ATGGTTTGAGGTTGTTGTGG+TGG | + | chr1_4:41105564-41105583 | Msa0163160:intron | 45.0% |
| ! | TGGTTTGAGGTTGTTGTGGT+GGG | + | chr1_4:41105565-41105584 | Msa0163160:intron | 45.0% |
| !!! | GGAAAGTTTTGGAGGTGATC+AGG | + | chr1_4:41105887-41105906 | Msa0163160:intron | 45.0% |
| TACGGGTCAGAACAACTTGT+TGG | - | chr1_4:41105998-41106017 | None:intergenic | 45.0% | |
| ACAACCGTGTTTCACAGCTT+TGG | - | chr1_4:41106226-41106245 | None:intergenic | 45.0% | |
| AAGCTGTGAAACACGGTTGT+AGG | + | chr1_4:41106226-41106245 | Msa0163160:intron | 45.0% | |
| ! | AGGGGTTATGATTGGGTTGT+AGG | + | chr1_4:41106303-41106322 | Msa0163160:intron | 45.0% |
| ! | GGGGTTATGATTGGGTTGTA+GGG | + | chr1_4:41106304-41106323 | Msa0163160:intron | 45.0% |
| TCTCAGATCTAGGAGTTCCT+AGG | + | chr1_4:41106339-41106358 | Msa0163160:intron | 45.0% | |
| !! | ACCCGTATTGACTTCAACCT+AGG | - | chr1_4:41106359-41106378 | None:intergenic | 45.0% |
| AGGTTGAAGTCAATACGGGT+AGG | + | chr1_4:41106359-41106378 | Msa0163160:intron | 45.0% | |
| AGTCAATACGGGTAGGTCAT+AGG | + | chr1_4:41106366-41106385 | Msa0163160:intron | 45.0% | |
| GGTAGGTCATAGGTCTTTAG+TGG | + | chr1_4:41106376-41106395 | Msa0163160:intron | 45.0% | |
| ! | AGTGGATTTCCTTCATGGCT+TGG | + | chr1_4:41106434-41106453 | Msa0163160:intron | 45.0% |
| !! | ATTGGGTTCTCGTGGTTTTG+GGG | + | chr1_4:41106701-41106720 | Msa0163160:intron | 45.0% |
| ! | TCTTAGTTCTCGATTGTGGG+CGG | + | chr1_4:41106730-41106749 | Msa0163160:intron | 45.0% |
| !! | TTTTGAGAGCGAACTGCTGT+CGG | + | chr1_4:41106791-41106810 | Msa0163160:intron | 45.0% |
| !! | ACTGATGCTTGTTGTTGTGG+TGG | + | chr1_4:41106868-41106887 | Msa0163160:intron | 45.0% |
| ATTGGACTCATCCGTCAATC+TGG | + | chr1_4:41107096-41107115 | Msa0163160:intron | 45.0% | |
| TTGGACTCATCCGTCAATCT+GGG | + | chr1_4:41107097-41107116 | Msa0163160:intron | 45.0% | |
| CGCGTAAAAACCCAGATTGA+CGG | - | chr1_4:41107110-41107129 | None:intergenic | 45.0% | |
| GTCTAATGTTCCCTCAATCC+TGG | + | chr1_4:41107480-41107499 | Msa0163160:intron | 45.0% | |
| ATGCATGTTGGCACATGTGT+GGG | + | chr1_4:41107508-41107527 | Msa0163160:intron | 45.0% | |
| !!! | TAGATTTTTTTTATATTTTA+TGG | + | chr1_4:41100537-41100556 | Msa0163160:intron | 5.0% |
| !!! | TAATTTGTTAATAAAATATA+TGG | + | chr1_4:41102448-41102467 | Msa0163160:intron | 5.0% |
| !!! | TTTTTTCTTTTTAAATTATT+CGG | + | chr1_4:41103517-41103536 | Msa0163160:intron | 5.0% |
| !!! | TAGATTTTTTTTATATTTTA+TGG | + | chr1_4:41100537-41100556 | Msa0163160:intron | 5.0% |
| !!! | TAATTTGTTAATAAAATATA+TGG | + | chr1_4:41102448-41102467 | Msa0163160:intron | 5.0% |
| !!! | TTTTTTCTTTTTAAATTATT+CGG | + | chr1_4:41103517-41103536 | Msa0163160:intron | 5.0% |
| GTCTACTGTGGTAGCAGTTC+AGG | + | chr1_4:41100357-41100376 | Msa0163160:CDS | 50.0% | |
| ! | GGTTTATGGAGGTGGTAGTG+TGG | + | chr1_4:41101310-41101329 | Msa0163160:CDS | 50.0% |
| !! | ATGGTGGACGCCATGTTCTT+GGG | + | chr1_4:41101366-41101385 | Msa0163160:CDS | 50.0% |
| ! | TCGGAGTTCGGAGTTCTGAT+GGG | - | chr1_4:41101535-41101554 | None:intergenic | 50.0% |
| ! | TTCGGAGTTCGGAGTTCTGA+TGG | - | chr1_4:41101536-41101555 | None:intergenic | 50.0% |
| CAACTACGGAGTTCGGAGTT+CGG | - | chr1_4:41101547-41101566 | None:intergenic | 50.0% | |
| GAAAGTTCATGCGCGGGAAT+TGG | + | chr1_4:41102070-41102089 | Msa0163160:intron | 50.0% | |
| CTCTTGGCATGAGACTCCTA+GGG | - | chr1_4:41102339-41102358 | None:intergenic | 50.0% | |
| TCTCTTGGCATGAGACTCCT+AGG | - | chr1_4:41102340-41102359 | None:intergenic | 50.0% | |
| TAGGAGTCTCATGCCAAGAG+AGG | + | chr1_4:41102339-41102358 | Msa0163160:CDS | 50.0% | |
| CAGCTCTCACTTCCCCAATA+GGG | - | chr1_4:41102500-41102519 | None:intergenic | 50.0% | |
| ACAGCTCTCACTTCCCCAAT+AGG | - | chr1_4:41102501-41102520 | None:intergenic | 50.0% | |
| GAAAGCTGAAATGGCTAGGC+AGG | + | chr1_4:41102539-41102558 | Msa0163160:CDS | 50.0% | |
| CATACCAGGAAGGGCAATGA+AGG | - | chr1_4:41102571-41102590 | None:intergenic | 50.0% | |
| GTAGCAGACCGGTCCATATA+TGG | - | chr1_4:41102726-41102745 | None:intergenic | 50.0% | |
| ACTTGGGATCCACAGCAAAC+CGG | + | chr1_4:41103003-41103022 | Msa0163160:intron | 50.0% | |
| !! | TGGTTCTTACCGGTTTGCTG+TGG | - | chr1_4:41103015-41103034 | None:intergenic | 50.0% |
| CTAGAGACATGCCTGAAAGG+TGG | + | chr1_4:41103329-41103348 | Msa0163160:intron | 50.0% | |
| ACATGCCTGAAAGGTGGGAA+TGG | + | chr1_4:41103335-41103354 | Msa0163160:intron | 50.0% | |
| CTTGCCTCTTGTGAACTCTC+TGG | + | chr1_4:41103419-41103438 | Msa0163160:intron | 50.0% | |
| GCAGGTGGGTCTATTGAATG+TGG | + | chr1_4:41104328-41104347 | Msa0163160:intron | 50.0% | |
| GATAATGCGACGTGCCTTTG+GGG | - | chr1_4:41104414-41104433 | None:intergenic | 50.0% | |
| CGATAATGCGACGTGCCTTT+GGG | - | chr1_4:41104415-41104434 | None:intergenic | 50.0% | |
| ACGATAATGCGACGTGCCTT+TGG | - | chr1_4:41104416-41104435 | None:intergenic | 50.0% | |
| AGCATCCACAGCCAAGGAAT+TGG | + | chr1_4:41104439-41104458 | Msa0163160:CDS | 50.0% | |
| CCTAACCAATTCCTTGGCTG+TGG | - | chr1_4:41104447-41104466 | None:intergenic | 50.0% | |
| CCACAGCCAAGGAATTGGTT+AGG | + | chr1_4:41104444-41104463 | Msa0163160:CDS | 50.0% | |
| ! | GGATATGGAGGAAGGTACGA+CGG | - | chr1_4:41105331-41105350 | None:intergenic | 50.0% |
| !! | AGCAAAAGAGGCGTCAATGG+TGG | - | chr1_4:41105411-41105430 | None:intergenic | 50.0% |
| !! | GACAGCAAAAGAGGCGTCAA+TGG | - | chr1_4:41105414-41105433 | None:intergenic | 50.0% |
| !! | TTGACGCCTCTTTTGCTGTC+TGG | + | chr1_4:41105414-41105433 | Msa0163160:intron | 50.0% |
| GACAGAGGGCGACAATTTGA+CGG | - | chr1_4:41105520-41105539 | None:intergenic | 50.0% | |
| TCAACCGACAGTTGGACAGA+GGG | - | chr1_4:41105534-41105553 | None:intergenic | 50.0% | |
| ATCAACCGACAGTTGGACAG+AGG | - | chr1_4:41105535-41105554 | None:intergenic | 50.0% | |
| !! | GAGGTTGTTGTGGTGGGTAA+CGG | + | chr1_4:41105571-41105590 | Msa0163160:intron | 50.0% |
| AGAAACCACCCCCAAACTAG+AGG | - | chr1_4:41105605-41105624 | None:intergenic | 50.0% | |
| TCAGCGACCTCCACTTATGT+TGG | + | chr1_4:41105636-41105655 | Msa0163160:intron | 50.0% | |
| GACACGATGTTCCAACATCC+TGG | + | chr1_4:41105714-41105733 | Msa0163160:intron | 50.0% | |
| GATGTTCCAACATCCTGGCA+AGG | + | chr1_4:41105719-41105738 | Msa0163160:intron | 50.0% | |
| ACTGAACCTTGCCAGGATGT+TGG | - | chr1_4:41105728-41105747 | None:intergenic | 50.0% | |
| AAGTCACACTGAACCTTGCC+AGG | - | chr1_4:41105735-41105754 | None:intergenic | 50.0% | |
| TGGGTTGTAGGGAGTGAGAT+AGG | + | chr1_4:41106315-41106334 | Msa0163160:intron | 50.0% | |
| TGCAACGTCATCTACTCTGG+GGG | - | chr1_4:41106463-41106482 | None:intergenic | 50.0% | |
| GTGCAACGTCATCTACTCTG+GGG | - | chr1_4:41106464-41106483 | None:intergenic | 50.0% | |
| GGTGCAACGTCATCTACTCT+GGG | - | chr1_4:41106465-41106484 | None:intergenic | 50.0% | |
| TGGTGTGTCGCCATCCTTAT+TGG | + | chr1_4:41106683-41106702 | Msa0163160:intron | 50.0% | |
| GGTGTGTCGCCATCCTTATT+GGG | + | chr1_4:41106684-41106703 | Msa0163160:intron | 50.0% | |
| CCACGAGAACCCAATAAGGA+TGG | - | chr1_4:41106696-41106715 | None:intergenic | 50.0% | |
| CCATCCTTATTGGGTTCTCG+TGG | + | chr1_4:41106693-41106712 | Msa0163160:intron | 50.0% | |
| TTTGAGAGCGAACTGCTGTC+GGG | + | chr1_4:41106792-41106811 | Msa0163160:intron | 50.0% | |
| GCAAAGCAAGAGCTTCATGG+TGG | - | chr1_4:41106826-41106845 | None:intergenic | 50.0% | |
| GCAGCAAAGCAAGAGCTTCA+TGG | - | chr1_4:41106829-41106848 | None:intergenic | 50.0% | |
| !! | GATGCTTGTTGTTGTGGTGG+AGG | + | chr1_4:41106871-41106890 | Msa0163160:intron | 50.0% |
| ! | TCTGGGTTTTTACGCGTCTG+TGG | + | chr1_4:41107114-41107133 | Msa0163160:intron | 50.0% |
| TACGCGTCTGTGGTATTTGG+TGG | + | chr1_4:41107124-41107143 | Msa0163160:intron | 50.0% | |
| TTCAGTGAGATGTTGGCCCT+TGG | + | chr1_4:41107260-41107279 | Msa0163160:intron | 50.0% | |
| ATGTTCCCTCAATCCTGGGA+CGG | + | chr1_4:41107485-41107504 | Msa0163160:intron | 50.0% | |
| GATGCATGTTGGCACATGTG+TGG | + | chr1_4:41107507-41107526 | Msa0163160:intron | 50.0% | |
| GTCTACTGTGGTAGCAGTTC+AGG | + | chr1_4:41100357-41100376 | Msa0163160:CDS | 50.0% | |
| ! | GGTTTATGGAGGTGGTAGTG+TGG | + | chr1_4:41101310-41101329 | Msa0163160:CDS | 50.0% |
| !! | ATGGTGGACGCCATGTTCTT+GGG | + | chr1_4:41101366-41101385 | Msa0163160:CDS | 50.0% |
| ! | TCGGAGTTCGGAGTTCTGAT+GGG | - | chr1_4:41101535-41101554 | None:intergenic | 50.0% |
| ! | TTCGGAGTTCGGAGTTCTGA+TGG | - | chr1_4:41101536-41101555 | None:intergenic | 50.0% |
| CAACTACGGAGTTCGGAGTT+CGG | - | chr1_4:41101547-41101566 | None:intergenic | 50.0% | |
| GAAAGTTCATGCGCGGGAAT+TGG | + | chr1_4:41102070-41102089 | Msa0163160:intron | 50.0% | |
| CTCTTGGCATGAGACTCCTA+GGG | - | chr1_4:41102339-41102358 | None:intergenic | 50.0% | |
| TCTCTTGGCATGAGACTCCT+AGG | - | chr1_4:41102340-41102359 | None:intergenic | 50.0% | |
| TAGGAGTCTCATGCCAAGAG+AGG | + | chr1_4:41102339-41102358 | Msa0163160:CDS | 50.0% | |
| CAGCTCTCACTTCCCCAATA+GGG | - | chr1_4:41102500-41102519 | None:intergenic | 50.0% | |
| ACAGCTCTCACTTCCCCAAT+AGG | - | chr1_4:41102501-41102520 | None:intergenic | 50.0% | |
| GAAAGCTGAAATGGCTAGGC+AGG | + | chr1_4:41102539-41102558 | Msa0163160:CDS | 50.0% | |
| CATACCAGGAAGGGCAATGA+AGG | - | chr1_4:41102571-41102590 | None:intergenic | 50.0% | |
| GTAGCAGACCGGTCCATATA+TGG | - | chr1_4:41102726-41102745 | None:intergenic | 50.0% | |
| ACTTGGGATCCACAGCAAAC+CGG | + | chr1_4:41103003-41103022 | Msa0163160:intron | 50.0% | |
| !! | TGGTTCTTACCGGTTTGCTG+TGG | - | chr1_4:41103015-41103034 | None:intergenic | 50.0% |
| CTAGAGACATGCCTGAAAGG+TGG | + | chr1_4:41103329-41103348 | Msa0163160:intron | 50.0% | |
| ACATGCCTGAAAGGTGGGAA+TGG | + | chr1_4:41103335-41103354 | Msa0163160:intron | 50.0% | |
| CTTGCCTCTTGTGAACTCTC+TGG | + | chr1_4:41103419-41103438 | Msa0163160:intron | 50.0% | |
| GCAGGTGGGTCTATTGAATG+TGG | + | chr1_4:41104328-41104347 | Msa0163160:intron | 50.0% | |
| GATAATGCGACGTGCCTTTG+GGG | - | chr1_4:41104414-41104433 | None:intergenic | 50.0% | |
| CGATAATGCGACGTGCCTTT+GGG | - | chr1_4:41104415-41104434 | None:intergenic | 50.0% | |
| ACGATAATGCGACGTGCCTT+TGG | - | chr1_4:41104416-41104435 | None:intergenic | 50.0% | |
| AGCATCCACAGCCAAGGAAT+TGG | + | chr1_4:41104439-41104458 | Msa0163160:CDS | 50.0% | |
| CCTAACCAATTCCTTGGCTG+TGG | - | chr1_4:41104447-41104466 | None:intergenic | 50.0% | |
| CCACAGCCAAGGAATTGGTT+AGG | + | chr1_4:41104444-41104463 | Msa0163160:CDS | 50.0% | |
| ! | GGATATGGAGGAAGGTACGA+CGG | - | chr1_4:41105331-41105350 | None:intergenic | 50.0% |
| !! | AGCAAAAGAGGCGTCAATGG+TGG | - | chr1_4:41105411-41105430 | None:intergenic | 50.0% |
| !! | GACAGCAAAAGAGGCGTCAA+TGG | - | chr1_4:41105414-41105433 | None:intergenic | 50.0% |
| !! | TTGACGCCTCTTTTGCTGTC+TGG | + | chr1_4:41105414-41105433 | Msa0163160:intron | 50.0% |
| GACAGAGGGCGACAATTTGA+CGG | - | chr1_4:41105520-41105539 | None:intergenic | 50.0% | |
| TCAACCGACAGTTGGACAGA+GGG | - | chr1_4:41105534-41105553 | None:intergenic | 50.0% | |
| ATCAACCGACAGTTGGACAG+AGG | - | chr1_4:41105535-41105554 | None:intergenic | 50.0% | |
| !! | GAGGTTGTTGTGGTGGGTAA+CGG | + | chr1_4:41105571-41105590 | Msa0163160:intron | 50.0% |
| AGAAACCACCCCCAAACTAG+AGG | - | chr1_4:41105605-41105624 | None:intergenic | 50.0% | |
| TCAGCGACCTCCACTTATGT+TGG | + | chr1_4:41105636-41105655 | Msa0163160:intron | 50.0% | |
| GACACGATGTTCCAACATCC+TGG | + | chr1_4:41105714-41105733 | Msa0163160:intron | 50.0% | |
| GATGTTCCAACATCCTGGCA+AGG | + | chr1_4:41105719-41105738 | Msa0163160:intron | 50.0% | |
| ACTGAACCTTGCCAGGATGT+TGG | - | chr1_4:41105728-41105747 | None:intergenic | 50.0% | |
| AAGTCACACTGAACCTTGCC+AGG | - | chr1_4:41105735-41105754 | None:intergenic | 50.0% | |
| TGGGTTGTAGGGAGTGAGAT+AGG | + | chr1_4:41106315-41106334 | Msa0163160:intron | 50.0% | |
| TGCAACGTCATCTACTCTGG+GGG | - | chr1_4:41106463-41106482 | None:intergenic | 50.0% | |
| GTGCAACGTCATCTACTCTG+GGG | - | chr1_4:41106464-41106483 | None:intergenic | 50.0% | |
| GGTGCAACGTCATCTACTCT+GGG | - | chr1_4:41106465-41106484 | None:intergenic | 50.0% | |
| TGGTGTGTCGCCATCCTTAT+TGG | + | chr1_4:41106683-41106702 | Msa0163160:intron | 50.0% | |
| GGTGTGTCGCCATCCTTATT+GGG | + | chr1_4:41106684-41106703 | Msa0163160:intron | 50.0% | |
| CCACGAGAACCCAATAAGGA+TGG | - | chr1_4:41106696-41106715 | None:intergenic | 50.0% | |
| CCATCCTTATTGGGTTCTCG+TGG | + | chr1_4:41106693-41106712 | Msa0163160:intron | 50.0% | |
| TTTGAGAGCGAACTGCTGTC+GGG | + | chr1_4:41106792-41106811 | Msa0163160:intron | 50.0% | |
| GCAAAGCAAGAGCTTCATGG+TGG | - | chr1_4:41106826-41106845 | None:intergenic | 50.0% | |
| GCAGCAAAGCAAGAGCTTCA+TGG | - | chr1_4:41106829-41106848 | None:intergenic | 50.0% | |
| !! | GATGCTTGTTGTTGTGGTGG+AGG | + | chr1_4:41106871-41106890 | Msa0163160:intron | 50.0% |
| ! | TCTGGGTTTTTACGCGTCTG+TGG | + | chr1_4:41107114-41107133 | Msa0163160:intron | 50.0% |
| TACGCGTCTGTGGTATTTGG+TGG | + | chr1_4:41107124-41107143 | Msa0163160:intron | 50.0% | |
| TTCAGTGAGATGTTGGCCCT+TGG | + | chr1_4:41107260-41107279 | Msa0163160:intron | 50.0% | |
| ATGTTCCCTCAATCCTGGGA+CGG | + | chr1_4:41107485-41107504 | Msa0163160:intron | 50.0% | |
| GATGCATGTTGGCACATGTG+TGG | + | chr1_4:41107507-41107526 | Msa0163160:intron | 50.0% | |
| ! | AGGTGGTAGTGTGGGTCTGA+TGG | + | chr1_4:41101319-41101338 | Msa0163160:CDS | 55.0% |
| ! | GGTGGTAGTGTGGGTCTGAT+GGG | + | chr1_4:41101320-41101339 | Msa0163160:CDS | 55.0% |
| !! | GATGGTGGACGCCATGTTCT+TGG | + | chr1_4:41101365-41101384 | Msa0163160:CDS | 55.0% |
| GATGCCTTCATTGCCCTTCC+TGG | + | chr1_4:41102564-41102583 | Msa0163160:CDS | 55.0% | |
| GTCAATTCGACACGTGGGCT+CGG | - | chr1_4:41102643-41102662 | None:intergenic | 55.0% | |
| !! | AGAGGCGTCAATGGTGGAGA+GGG | - | chr1_4:41105405-41105424 | None:intergenic | 55.0% |
| !! | AAGAGGCGTCAATGGTGGAG+AGG | - | chr1_4:41105406-41105425 | None:intergenic | 55.0% |
| !! | ACGCCTCTTTTGCTGTCTGG+TGG | + | chr1_4:41105417-41105436 | Msa0163160:intron | 55.0% |
| GGACCACCAGACAGCAAAAG+AGG | - | chr1_4:41105423-41105442 | None:intergenic | 55.0% | |
| AGAGGGCGACAATTTGACGG+AGG | - | chr1_4:41105517-41105536 | None:intergenic | 55.0% | |
| ! | GGCGTTGTCGCCTCTAGTTT+GGG | + | chr1_4:41105592-41105611 | Msa0163160:intron | 55.0% |
| ! | GCGTTGTCGCCTCTAGTTTG+GGG | + | chr1_4:41105593-41105612 | Msa0163160:intron | 55.0% |
| ! | CGTTGTCGCCTCTAGTTTGG+GGG | + | chr1_4:41105594-41105613 | Msa0163160:intron | 55.0% |
| CGGTGCAACGTCATCTACTC+TGG | - | chr1_4:41106466-41106485 | None:intergenic | 55.0% | |
| TAGTTCTCGATTGTGGGCGG+TGG | + | chr1_4:41106733-41106752 | Msa0163160:intron | 55.0% | |
| ! | TTGTGGGCGGTGGAGTTTTG+TGG | + | chr1_4:41106743-41106762 | Msa0163160:intron | 55.0% |
| !! | GCTTGTTGTTGTGGTGGAGG+CGG | + | chr1_4:41106874-41106893 | Msa0163160:intron | 55.0% |
| TGCATCCGTCCCAGGATTGA+GGG | - | chr1_4:41107493-41107512 | None:intergenic | 55.0% | |
| ATGCATCCGTCCCAGGATTG+AGG | - | chr1_4:41107494-41107513 | None:intergenic | 55.0% | |
| ATCCTGGGACGGATGCATGT+TGG | + | chr1_4:41107496-41107515 | Msa0163160:intron | 55.0% | |
| ! | AGGTGGTAGTGTGGGTCTGA+TGG | + | chr1_4:41101319-41101338 | Msa0163160:CDS | 55.0% |
| ! | GGTGGTAGTGTGGGTCTGAT+GGG | + | chr1_4:41101320-41101339 | Msa0163160:CDS | 55.0% |
| !! | GATGGTGGACGCCATGTTCT+TGG | + | chr1_4:41101365-41101384 | Msa0163160:CDS | 55.0% |
| GATGCCTTCATTGCCCTTCC+TGG | + | chr1_4:41102564-41102583 | Msa0163160:CDS | 55.0% | |
| GTCAATTCGACACGTGGGCT+CGG | - | chr1_4:41102643-41102662 | None:intergenic | 55.0% | |
| !! | AGAGGCGTCAATGGTGGAGA+GGG | - | chr1_4:41105405-41105424 | None:intergenic | 55.0% |
| !! | AAGAGGCGTCAATGGTGGAG+AGG | - | chr1_4:41105406-41105425 | None:intergenic | 55.0% |
| !! | ACGCCTCTTTTGCTGTCTGG+TGG | + | chr1_4:41105417-41105436 | Msa0163160:intron | 55.0% |
| GGACCACCAGACAGCAAAAG+AGG | - | chr1_4:41105423-41105442 | None:intergenic | 55.0% | |
| AGAGGGCGACAATTTGACGG+AGG | - | chr1_4:41105517-41105536 | None:intergenic | 55.0% | |
| ! | GGCGTTGTCGCCTCTAGTTT+GGG | + | chr1_4:41105592-41105611 | Msa0163160:intron | 55.0% |
| ! | GCGTTGTCGCCTCTAGTTTG+GGG | + | chr1_4:41105593-41105612 | Msa0163160:intron | 55.0% |
| ! | CGTTGTCGCCTCTAGTTTGG+GGG | + | chr1_4:41105594-41105613 | Msa0163160:intron | 55.0% |
| CGGTGCAACGTCATCTACTC+TGG | - | chr1_4:41106466-41106485 | None:intergenic | 55.0% | |
| TAGTTCTCGATTGTGGGCGG+TGG | + | chr1_4:41106733-41106752 | Msa0163160:intron | 55.0% | |
| ! | TTGTGGGCGGTGGAGTTTTG+TGG | + | chr1_4:41106743-41106762 | Msa0163160:intron | 55.0% |
| !! | GCTTGTTGTTGTGGTGGAGG+CGG | + | chr1_4:41106874-41106893 | Msa0163160:intron | 55.0% |
| TGCATCCGTCCCAGGATTGA+GGG | - | chr1_4:41107493-41107512 | None:intergenic | 55.0% | |
| ATGCATCCGTCCCAGGATTG+AGG | - | chr1_4:41107494-41107513 | None:intergenic | 55.0% | |
| ATCCTGGGACGGATGCATGT+TGG | + | chr1_4:41107496-41107515 | Msa0163160:intron | 55.0% | |
| CGTGTCAGCATCCACAGCCA+AGG | + | chr1_4:41104433-41104452 | Msa0163160:CDS | 60.0% | |
| ! | GAGGAAGGTACGACGGCACA+AGG | - | chr1_4:41105324-41105343 | None:intergenic | 60.0% |
| ! | CAATGTGTGGTGGTGCGACG+AGG | + | chr1_4:41105375-41105394 | Msa0163160:intron | 60.0% |
| GTCGCCCTCTGTCCAACTGT+CGG | + | chr1_4:41105527-41105546 | Msa0163160:intron | 60.0% | |
| CGGCGTTGTCGCCTCTAGTT+TGG | + | chr1_4:41105591-41105610 | Msa0163160:intron | 60.0% | |
| ! | TGTCGCCTCTAGTTTGGGGG+TGG | + | chr1_4:41105597-41105616 | Msa0163160:intron | 60.0% |
| TGGGGGCTACCAAGCCATGA+AGG | - | chr1_4:41106446-41106465 | None:intergenic | 60.0% | |
| TGCCAACATGCATCCGTCCC+AGG | - | chr1_4:41107501-41107520 | None:intergenic | 60.0% | |
| CGTGTCAGCATCCACAGCCA+AGG | + | chr1_4:41104433-41104452 | Msa0163160:CDS | 60.0% | |
| ! | GAGGAAGGTACGACGGCACA+AGG | - | chr1_4:41105324-41105343 | None:intergenic | 60.0% |
| ! | CAATGTGTGGTGGTGCGACG+AGG | + | chr1_4:41105375-41105394 | Msa0163160:intron | 60.0% |
| GTCGCCCTCTGTCCAACTGT+CGG | + | chr1_4:41105527-41105546 | Msa0163160:intron | 60.0% | |
| CGGCGTTGTCGCCTCTAGTT+TGG | + | chr1_4:41105591-41105610 | Msa0163160:intron | 60.0% | |
| ! | TGTCGCCTCTAGTTTGGGGG+TGG | + | chr1_4:41105597-41105616 | Msa0163160:intron | 60.0% |
| TGGGGGCTACCAAGCCATGA+AGG | - | chr1_4:41106446-41106465 | None:intergenic | 60.0% | |
| TGCCAACATGCATCCGTCCC+AGG | - | chr1_4:41107501-41107520 | None:intergenic | 60.0% | |
| AACCCAGCGAACCCGCGTAC+GGG | - | chr1_4:41107360-41107379 | None:intergenic | 65.0% | |
| CAACCCAGCGAACCCGCGTA+CGG | - | chr1_4:41107361-41107380 | None:intergenic | 65.0% | |
| AACCCAGCGAACCCGCGTAC+GGG | - | chr1_4:41107360-41107379 | None:intergenic | 65.0% | |
| CAACCCAGCGAACCCGCGTA+CGG | - | chr1_4:41107361-41107380 | None:intergenic | 65.0% | |
| CCTGGTTTCGCCCCCGTACG+CGG | + | chr1_4:41107345-41107364 | Msa0163160:intron | 70.0% | |
| CTGGTTTCGCCCCCGTACGC+GGG | + | chr1_4:41107346-41107365 | Msa0163160:intron | 70.0% | |
| ACCCAGCGAACCCGCGTACG+GGG | - | chr1_4:41107359-41107378 | None:intergenic | 70.0% | |
| CCTGGTTTCGCCCCCGTACG+CGG | + | chr1_4:41107345-41107364 | Msa0163160:intron | 70.0% | |
| CTGGTTTCGCCCCCGTACGC+GGG | + | chr1_4:41107346-41107365 | Msa0163160:intron | 70.0% | |
| ACCCAGCGAACCCGCGTACG+GGG | - | chr1_4:41107359-41107378 | None:intergenic | 70.0% | |
| CCGCGTACGGGGGCGAAACC+AGG | - | chr1_4:41107348-41107367 | None:intergenic | 75.0% | |
| CCCAGCGAACCCGCGTACGG+GGG | - | chr1_4:41107358-41107377 | None:intergenic | 75.0% | |
| CCCCCGTACGCGGGTTCGCT+GGG | + | chr1_4:41107355-41107374 | Msa0163160:intron | 75.0% | |
| CCGCGTACGGGGGCGAAACC+AGG | - | chr1_4:41107348-41107367 | None:intergenic | 75.0% | |
| CCCAGCGAACCCGCGTACGG+GGG | - | chr1_4:41107358-41107377 | None:intergenic | 75.0% | |
| CCCCCGTACGCGGGTTCGCT+GGG | + | chr1_4:41107355-41107374 | Msa0163160:intron | 75.0% | |
| ! | GCCCCCGTACGCGGGTTCGC+TGG | + | chr1_4:41107354-41107373 | Msa0163160:intron | 80.0% |
| ! | GCCCCCGTACGCGGGTTCGC+TGG | + | chr1_4:41107354-41107373 | Msa0163160:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 41100321 | 41107985 | 41100321 | ID=Msa0163160;Name=Msa0163160 |
| chr1_4 | mRNA | 41100321 | 41107985 | 41100321 | ID=Msa0163160-mRNA-1;Parent=Msa0163160;Name=Msa0163160-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.42|0.25|0.87|0.57|0.62|8|0|185 |
| chr1_4 | exon | 41100321 | 41100428 | 41100321 | ID=Msa0163160-mRNA-1:exon:11809;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41101290 | 41101387 | 41101290 | ID=Msa0163160-mRNA-1:exon:11810;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41102330 | 41102360 | 41102330 | ID=Msa0163160-mRNA-1:exon:11811;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41102486 | 41102585 | 41102486 | ID=Msa0163160-mRNA-1:exon:11812;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41104332 | 41104372 | 41104332 | ID=Msa0163160-mRNA-1:exon:11813;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41104389 | 41104475 | 41104389 | ID=Msa0163160-mRNA-1:exon:11814;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41104676 | 41104761 | 41104676 | ID=Msa0163160-mRNA-1:exon:11815;Parent=Msa0163160-mRNA-1 |
| chr1_4 | exon | 41107979 | 41107985 | 41107979 | ID=Msa0163160-mRNA-1:exon:11816;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41100321 | 41100428 | 41100321 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41101290 | 41101387 | 41101290 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41102330 | 41102360 | 41102330 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41102486 | 41102585 | 41102486 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41104332 | 41104372 | 41104332 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41104389 | 41104475 | 41104389 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41104676 | 41104761 | 41104676 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| chr1_4 | CDS | 41107979 | 41107985 | 41107979 | ID=Msa0163160-mRNA-1:cds;Parent=Msa0163160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
