AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0168260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168260 MtrunA17_Chr1g0184421 85.606 264 38 0 131 394 246 509 2.10e-162 466
Msa0168260 MtrunA17_Chr1g0184461 86.260 262 36 0 133 394 248 509 4.11e-158 454
Msa0168260 MtrunA17_Chr7g0260831 67.442 258 84 0 133 390 246 503 1.15e-124 369
Msa0168260 MtrunA17_Chr7g0260821 64.341 258 92 0 133 390 247 504 7.68e-119 354
Msa0168260 MtrunA17_Chr1g0184471 94.675 169 9 0 133 301 223 391 4.07e-99 300
Msa0168260 MtrunA17_Chr1g0184471 79.070 43 9 0 16 58 1 43 9.14e-11 63.2
Msa0168260 MtrunA17_Chr7g0225531 51.145 262 120 5 133 390 255 512 9.72e-82 259
Msa0168260 MtrunA17_Chr7g0255131 47.348 264 127 4 134 389 249 508 1.39e-76 246
Msa0168260 MtrunA17_Chr3g0119681 46.763 278 118 6 135 390 249 518 4.29e-75 242
Msa0168260 MtrunA17_Chr4g0026941 46.388 263 126 7 133 389 286 539 4.51e-69 227
Msa0168260 MtrunA17_Chr4g0038271 39.623 318 157 9 96 389 254 560 9.46e-66 219
Msa0168260 MtrunA17_Chr1g0164321 37.578 322 163 9 96 389 236 547 4.35e-64 214
Msa0168260 MtrunA17_Chr2g0321171 44.444 261 130 6 133 389 249 498 9.28e-64 212
Msa0168260 MtrunA17_Chr1g0178971 41.636 269 135 6 133 389 254 512 3.01e-60 203
Msa0168260 MtrunA17_Chr8g0387001 37.261 314 165 8 100 392 206 508 1.98e-55 190
Msa0168260 MtrunA17_Chr8g0348751 35.262 363 203 11 47 389 160 510 2.31e-55 191
Msa0168260 MtrunA17_Chr5g0429651 42.623 244 116 6 165 389 270 508 8.32e-55 188
Msa0168260 MtrunA17_Chr8g0351391 34.472 322 189 6 82 389 198 511 2.28e-54 187
Msa0168260 MtrunA17_Chr3g0104351 39.114 271 136 7 133 384 251 511 1.61e-52 182
Msa0168260 MtrunA17_Chr1g0204271 31.646 316 191 5 51 346 154 464 3.60e-52 181
Msa0168260 MtrunA17_Chr6g0449361 35.968 253 143 5 150 389 257 503 4.33e-51 178
Msa0168260 MtrunA17_Chr8g0351311 33.657 309 184 5 91 385 207 508 8.00e-51 178
Msa0168260 MtrunA17_Chr6g0449381 34.926 272 156 5 133 389 240 505 8.68e-51 177
Msa0168260 MtrunA17_Chr1g0171041 35.316 269 157 6 130 389 246 506 1.56e-50 177
Msa0168260 MtrunA17_Chr4g0004481 36.179 246 142 4 152 388 252 491 1.75e-50 176
Msa0168260 MtrunA17_Chr8g0351441 34.146 287 161 6 91 357 200 478 5.47e-50 176
Msa0168260 MtrunA17_Chr7g0227281 37.398 246 137 5 154 389 256 494 5.85e-50 175
Msa0168260 MtrunA17_Chr4g0067191 31.856 361 186 11 70 389 174 515 1.64e-49 174
Msa0168260 MtrunA17_Chr7g0227291 36.992 246 138 5 154 389 256 494 2.13e-49 174
Msa0168260 MtrunA17_Chr8g0351461 35.192 287 158 7 91 357 200 478 3.98e-49 173
Msa0168260 MtrunA17_Chr6g0449341 37.052 251 131 4 145 389 334 563 4.21e-49 174
Msa0168260 MtrunA17_Chr6g0449351 33.725 255 150 5 150 391 217 465 8.39e-49 172
Msa0168260 MtrunA17_Chr8g0351421 34.146 287 161 7 91 357 201 479 3.88e-48 171
Msa0168260 MtrunA17_Chr1g0163371 38.532 218 121 4 179 389 11 222 8.00e-48 162
Msa0168260 MtrunA17_Chr6g0449331 37.698 252 136 6 153 389 270 515 1.05e-47 169
Msa0168260 MtrunA17_Chr8g0380501 34.677 248 146 4 154 391 252 493 4.45e-47 167
Msa0168260 MtrunA17_Chr5g0403451 37.452 259 116 9 167 389 31 279 4.88e-47 162
Msa0168260 MtrunA17_Chr1g0163281 35.316 269 156 5 133 389 257 519 1.29e-46 167
Msa0168260 MtrunA17_Chr1g0163211 34.746 236 144 4 154 389 276 501 2.71e-46 166
Msa0168260 MtrunA17_Chr1g0163391 37.662 231 130 4 167 389 278 502 4.00e-46 165
Msa0168260 MtrunA17_Chr1g0163421 34.444 270 154 6 131 389 283 540 5.14e-46 166
Msa0168260 MtrunA17_Chr1g0163351 37.668 223 126 4 174 389 289 505 1.41e-45 164
Msa0168260 MtrunA17_Chr1g0163511 32.283 254 151 5 151 390 273 519 1.57e-45 164
Msa0168260 MtrunA17_Chr1g0163491 32.609 322 182 7 97 389 206 521 1.27e-44 161
Msa0168260 MtrunA17_Chr1g0163461 35.426 223 131 4 174 389 303 519 5.28e-44 160
Msa0168260 MtrunA17_Chr8g0351401 35.802 243 131 6 135 357 242 479 1.38e-43 158
Msa0168260 MtrunA17_Chr1g0163451 34.529 223 133 3 174 389 308 524 1.80e-43 158
Msa0168260 MtrunA17_Chr1g0163501 34.703 219 129 3 179 389 287 499 1.24e-42 155
Msa0168260 MtrunA17_Chr1g0183611 40.212 189 96 3 180 358 215 396 4.93e-42 152
Msa0168260 MtrunA17_Chr1g0163401 36.239 218 125 4 180 389 301 512 4.52e-40 149
Msa0168260 MtrunA17_Chr1g0184481 87.500 72 8 1 320 390 1 72 5.05e-40 137
Msa0168260 MtrunA17_Chr7g0214931 41.667 180 88 4 131 293 260 439 1.00e-37 141
Msa0168260 MtrunA17_Chr1g0204241 35.160 219 118 5 167 385 99 293 2.06e-35 132
Msa0168260 MtrunA17_Chr1g0163431 39.362 188 102 4 133 308 202 389 1.16e-34 132
Msa0168260 MtrunA17_Chr1g0164351 40.523 153 70 4 131 262 270 422 1.08e-27 113
Msa0168260 MtrunA17_Chr7g0215181 27.018 285 184 8 80 356 210 478 4.33e-22 97.8
Msa0168260 MtrunA17_Chr5g0443401 29.515 227 137 6 134 349 226 440 6.08e-22 97.4
Msa0168260 MtrunA17_Chr2g0309311 36.810 163 75 4 167 328 16 151 6.27e-22 92.4
Msa0168260 MtrunA17_Chr6g0457421 30.085 236 146 7 129 356 252 476 2.55e-20 92.8
Msa0168260 MtrunA17_Chr8g0357121 43.878 98 50 1 257 354 25 117 6.36e-20 85.5
Msa0168260 MtrunA17_Chr8g0354531 26.016 246 154 7 129 356 379 614 7.39e-20 91.7
Msa0168260 MtrunA17_Chr8g0388921 24.911 281 179 8 102 368 200 462 2.04e-19 89.7
Msa0168260 MtrunA17_Chr4g0030711 29.050 179 121 4 181 356 304 479 4.96e-19 89.0
Msa0168260 MtrunA17_Chr1g0203141 25.641 234 149 6 136 356 263 484 5.00e-19 89.0
Msa0168260 MtrunA17_Chr1g0207841 28.507 221 135 8 166 371 287 499 6.49e-19 88.6
Msa0168260 MtrunA17_Chr4g0030701 29.310 174 117 4 186 356 306 476 7.83e-19 88.2
Msa0168260 MtrunA17_Chr8g0380471 23.729 295 186 8 116 392 206 479 1.09e-18 87.8
Msa0168260 MtrunA17_Chr8g0387101 28.194 227 137 7 180 390 291 507 1.47e-18 87.4
Msa0168260 MtrunA17_Chr1g0164341 39.806 103 56 3 287 389 1 97 2.60e-18 80.1
Msa0168260 MtrunA17_Chr0c19g0493771 27.074 229 158 6 133 357 394 617 3.09e-18 86.7
Msa0168260 MtrunA17_Chr1g0203151 27.391 230 140 7 141 356 264 480 5.60e-18 85.5
Msa0168260 MtrunA17_Chr1g0179811 25.475 263 181 7 135 390 286 540 6.49e-18 85.5
Msa0168260 MtrunA17_Chr6g0451681 28.061 196 129 4 180 367 262 453 1.25e-17 84.3
Msa0168260 MtrunA17_Chr2g0313831 25.547 274 164 10 129 374 250 511 1.96e-17 84.0
Msa0168260 MtrunA17_Chr6g0479681 26.210 248 146 7 136 356 261 498 3.67e-17 83.2
Msa0168260 MtrunA17_Chr6g0472221 26.667 180 118 5 183 357 326 496 5.74e-17 82.4
Msa0168260 MtrunA17_Chr3g0128461 26.877 253 156 7 140 374 278 519 6.61e-17 82.4
Msa0168260 MtrunA17_Chr8g0339331 27.600 250 156 9 133 367 252 491 9.44e-17 82.0
Msa0168260 MtrunA17_Chr4g0046351 24.427 262 175 7 113 356 214 470 9.46e-17 82.0
Msa0168260 MtrunA17_Chr4g0046331 24.621 264 174 7 113 356 214 472 1.20e-16 81.6
Msa0168260 MtrunA17_Chr4g0046321 24.335 263 174 8 113 356 214 470 1.64e-16 81.3
Msa0168260 MtrunA17_Chr2g0313771 26.295 251 151 9 127 356 255 492 1.96e-16 80.9
Msa0168260 MtrunA17_Chr2g0280121 27.397 219 147 3 180 390 296 510 2.76e-16 80.5
Msa0168260 MtrunA17_Chr2g0307291 25.373 268 164 9 133 374 256 513 2.82e-16 80.5
Msa0168260 MtrunA17_Chr2g0280071 26.484 219 147 4 180 389 323 536 4.68e-16 80.1
Msa0168260 MtrunA17_Chr6g0458561 29.744 195 130 4 176 367 314 504 4.72e-16 79.7
Msa0168260 MtrunA17_Chr5g0419451 25.410 244 169 7 131 367 258 495 1.05e-15 78.6
Msa0168260 MtrunA17_Chr8g0364651 27.064 218 150 5 179 390 285 499 1.15e-15 78.6
Msa0168260 MtrunA17_Chr5g0430081 27.128 188 127 4 174 357 286 467 1.24e-15 78.6
Msa0168260 MtrunA17_Chr7g0235261 24.576 236 163 5 132 358 252 481 1.40e-15 78.2
Msa0168260 MtrunA17_Chr4g0004601 25.214 234 157 6 134 358 278 502 1.62e-15 78.2
Msa0168260 MtrunA17_Chr5g0430131 24.528 212 141 6 159 357 263 468 1.80e-15 77.8
Msa0168260 MtrunA17_Chr8g0354511 25.896 251 148 8 129 356 258 493 2.75e-15 77.4
Msa0168260 MtrunA17_Chr8g0390881 26.531 245 152 9 131 356 233 468 2.93e-15 77.4
Msa0168260 MtrunA17_Chr8g0362731 29.064 203 133 5 157 357 185 378 3.26e-15 76.6
Msa0168260 MtrunA17_Chr8g0351801 28.649 185 118 5 180 356 304 482 3.67e-15 77.0
Msa0168260 MtrunA17_Chr2g0280081 26.484 219 149 3 180 390 791 1005 3.81e-15 77.4
Msa0168260 MtrunA17_Chr2g0280081 30.108 186 116 4 180 356 290 470 4.85e-15 77.0
Msa0168260 MtrunA17_Chr4g0046681 28.846 208 139 4 189 392 30 232 4.89e-15 74.3
Msa0168260 MtrunA17_Chr5g0395321 23.906 297 202 7 80 369 193 472 4.99e-15 76.6
Msa0168260 MtrunA17_Chr5g0446131 24.068 295 181 11 108 374 230 509 1.20e-14 75.5
Msa0168260 MtrunA17_Chr5g0430071 24.066 241 162 7 131 356 87 321 1.46e-14 74.3
Msa0168260 MtrunA17_Chr1g0174471 24.229 227 152 7 131 342 252 473 1.48e-14 75.1
Msa0168260 MtrunA17_Chr5g0395381 23.420 269 184 6 89 351 178 430 2.91e-14 74.3
Msa0168260 MtrunA17_Chr8g0354571 23.904 251 157 9 127 356 256 493 3.40e-14 73.9
Msa0168260 MtrunA17_Chr1g0174481 26.457 223 148 7 131 342 235 452 3.59e-14 73.9
Msa0168260 MtrunA17_Chr5g0430101 25.137 183 127 4 179 357 290 466 4.21e-14 73.9
Msa0168260 MtrunA17_Chr1g0156101 23.830 235 161 5 134 356 247 475 4.37e-14 73.6
Msa0168260 MtrunA17_Chr6g0484841 25.847 236 153 9 131 351 234 462 4.58e-14 73.6
Msa0168260 MtrunA17_Chr7g0248991 28.977 176 119 5 135 306 178 351 4.77e-14 73.2
Msa0168260 MtrunA17_Chr1g0193811 26.136 176 122 3 183 356 316 485 5.22e-14 73.6
Msa0168260 MtrunA17_Chr5g0409051 26.667 210 143 6 156 357 270 476 5.73e-14 73.2
Msa0168260 MtrunA17_Chr1g0174461 24.779 226 151 7 131 342 237 457 6.18e-14 73.2
Msa0168260 MtrunA17_Chr6g0451641 26.087 230 149 8 151 367 272 493 6.37e-14 73.2
Msa0168260 MtrunA17_Chr7g0255531 26.293 232 157 6 143 368 247 470 8.27e-14 72.8
Msa0168260 MtrunA17_Chr5g0402981 26.020 196 137 4 202 393 4 195 9.19e-14 69.7
Msa0168260 MtrunA17_Chr4g0058231 25.926 189 130 5 179 363 291 473 1.14e-13 72.4
Msa0168260 MtrunA17_Chr4g0014051 26.592 267 162 8 132 374 267 523 1.38e-13 72.4
Msa0168260 MtrunA17_Chr6g0484811 24.380 242 163 7 131 357 234 470 1.38e-13 72.0
Msa0168260 MtrunA17_Chr8g0377341 27.966 236 155 7 133 361 271 498 1.42e-13 72.0
Msa0168260 MtrunA17_Chr2g0309301 41.304 92 48 2 133 223 73 159 1.72e-13 68.6
Msa0168260 MtrunA17_Chr5g0430091 25.207 242 160 8 131 357 234 469 1.75e-13 72.0
Msa0168260 MtrunA17_Chr4g0044851 28.516 256 135 12 119 357 217 441 1.86e-13 71.6
Msa0168260 MtrunA17_Chr7g0246221 24.883 213 142 5 167 369 274 478 2.30e-13 71.6
Msa0168260 MtrunA17_Chr5g0413911 25.571 219 149 5 179 389 316 528 2.49e-13 71.2
Msa0168260 MtrunA17_Chr8g0339311 25.106 235 152 6 135 351 259 487 2.70e-13 71.2
Msa0168260 MtrunA17_Chr8g0390871 23.757 181 129 4 179 356 16 190 2.71e-13 68.9
Msa0168260 MtrunA17_Chr3g0116681 27.232 224 149 6 119 335 230 446 6.57e-13 70.1
Msa0168260 MtrunA17_Chr6g0466941 23.695 249 172 6 133 367 250 494 7.58e-13 70.1
Msa0168260 MtrunA17_Chr1g0164211 25.316 237 155 5 113 342 223 444 7.81e-13 69.7
Msa0168260 MtrunA17_Chr3g0094231 26.570 207 134 8 186 384 296 492 8.32e-13 69.7
Msa0168260 MtrunA17_Chr4g0058211 26.804 194 129 6 181 367 7 194 1.00e-12 67.0
Msa0168260 MtrunA17_Chr4g0011851 26.554 177 121 4 183 356 9 179 1.27e-12 66.6
Msa0168260 MtrunA17_Chr2g0314721 26.210 248 167 9 113 356 236 471 1.35e-12 68.9
Msa0168260 MtrunA17_Chr2g0313751 23.985 271 164 10 133 374 281 538 1.94e-12 68.6
Msa0168260 MtrunA17_Chr5g0430031 25.306 245 160 9 121 351 227 462 2.39e-12 68.2
Msa0168260 MtrunA17_Chr5g0403331 27.309 249 155 11 107 337 209 449 2.69e-12 68.2
Msa0168260 MtrunA17_Chr6g0451781 25.000 228 155 7 151 367 311 533 2.72e-12 68.2
Msa0168260 MtrunA17_Chr1g0164331 35.955 89 53 1 265 353 3 87 3.74e-12 63.9
Msa0168260 MtrunA17_Chr4g0011961 22.857 245 151 7 139 356 226 459 3.77e-12 67.8
Msa0168260 MtrunA17_Chr2g0280041 25.664 226 142 7 180 390 322 536 3.88e-12 67.8
Msa0168260 MtrunA17_Chr5g0431641 26.106 226 149 7 125 342 233 448 4.40e-12 67.4
Msa0168260 MtrunA17_Chr5g0408181 25.896 251 151 8 121 357 205 434 4.88e-12 67.4
Msa0168260 MtrunA17_Chr3g0141801 24.444 270 162 11 137 386 234 481 6.83e-12 67.0
Msa0168260 MtrunA17_Chr3g0135841 24.549 277 183 8 127 389 272 536 7.70e-12 67.0
Msa0168260 MtrunA17_Chr6g0451771 26.316 190 129 7 183 367 15 198 9.23e-12 64.3
Msa0168260 MtrunA17_Chr4g0008101 24.783 230 151 8 133 345 258 482 9.59e-12 66.6
Msa0168260 MtrunA17_Chr5g0403351 26.108 203 137 4 142 337 252 448 1.03e-11 66.2
Msa0168260 MtrunA17_Chr4g0011901 27.011 174 118 4 186 356 293 460 1.46e-11 65.9
Msa0168260 MtrunA17_Chr4g0039901 26.168 214 140 5 148 349 253 460 1.48e-11 65.9
Msa0168260 MtrunA17_Chr8g0372251 24.603 252 145 9 113 339 221 452 2.03e-11 65.5
Msa0168260 MtrunA17_Chr5g0430111 25.478 157 103 4 166 309 271 426 5.48e-11 63.9
Msa0168260 MtrunA17_Chr4g0047661 27.742 155 103 4 186 337 314 462 5.65e-11 63.9
Msa0168260 MtrunA17_Chr2g0304871 27.542 236 156 7 151 377 272 501 5.88e-11 63.9
Msa0168260 MtrunA17_Chr5g0430041 25.352 142 100 3 215 356 4 139 6.06e-11 61.2
Msa0168260 MtrunA17_Chr8g0364081 24.468 282 171 8 101 356 245 510 6.11e-11 63.9
Msa0168260 MtrunA17_Chr2g0296651 21.304 230 162 6 129 353 238 453 6.83e-11 63.9
Msa0168260 MtrunA17_Chr3g0086651 24.713 174 126 3 186 356 299 470 6.88e-11 63.9
Msa0168260 MtrunA17_Chr7g0265611 24.701 251 158 10 114 351 243 475 7.03e-11 63.9
Msa0168260 MtrunA17_Chr7g0218601 24.171 211 145 7 151 356 263 463 7.60e-11 63.5
Msa0168260 MtrunA17_Chr8g0344151 23.529 255 168 9 114 357 231 469 8.32e-11 63.5
Msa0168260 MtrunA17_Chr7g0254641 24.359 234 156 7 133 348 244 474 9.46e-11 63.5
Msa0168260 MtrunA17_Chr3g0101691 26.577 222 136 9 134 337 238 450 9.59e-11 63.5
Msa0168260 MtrunA17_Chr5g0445441 24.424 217 149 6 134 341 280 490 9.92e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168260 AT3G48520.1 50.763 262 123 5 133 391 243 501 1.26e-80 256
Msa0168260 AT5G63450.1 49.042 261 126 5 133 389 245 502 1.10e-78 251
Msa0168260 AT5G63450.2 49.042 261 126 5 133 389 303 560 2.44e-78 252
Msa0168260 AT1G34540.1 44.569 267 130 6 133 389 239 497 1.51e-71 233
Msa0168260 AT3G56630.1 44.569 267 131 6 133 389 239 498 1.59e-71 233
Msa0168260 AT2G27690.1 44.151 265 132 5 133 389 238 494 2.27e-70 229
Msa0168260 AT3G01900.1 45.038 262 130 6 133 389 238 490 1.92e-67 222
Msa0168260 AT4G00360.1 42.125 273 135 7 135 389 244 511 5.84e-62 209
Msa0168260 AT5G23190.1 39.623 318 159 10 95 389 233 540 7.23e-62 209
Msa0168260 AT1G24540.1 40.288 278 138 5 133 389 250 520 9.87e-61 205
Msa0168260 AT1G13140.1 41.155 277 134 6 135 389 255 524 1.21e-60 205
Msa0168260 AT5G08250.1 38.750 320 160 9 96 389 169 478 1.91e-60 203
Msa0168260 AT5G08250.2 38.750 320 160 9 96 389 231 540 4.02e-60 204
Msa0168260 AT1G13150.1 40.072 277 137 6 135 389 248 517 1.17e-59 202
Msa0168260 AT2G45970.1 37.700 313 170 9 100 392 206 513 1.45e-59 202
Msa0168260 AT3G26125.1 41.404 285 130 6 135 389 255 532 1.77e-58 199
Msa0168260 AT1G13140.2 41.897 253 119 5 158 389 253 498 5.53e-58 197
Msa0168260 AT1G01600.1 40.580 276 137 8 135 389 244 513 5.56e-57 196
Msa0168260 AT1G63710.1 38.686 274 145 6 135 392 244 510 7.50e-55 189
Msa0168260 AT2G45510.1 37.979 287 149 7 116 381 222 500 2.33e-53 185
Msa0168260 AT1G65340.1 37.109 256 142 5 127 368 234 484 2.36e-53 185
Msa0168260 AT2G21910.1 36.364 275 151 6 133 389 238 506 5.95e-53 184
Msa0168260 AT5G58860.1 36.513 304 152 8 120 389 212 508 4.87e-52 181
Msa0168260 AT1G57750.1 37.410 278 147 8 127 390 233 497 5.32e-50 176
Msa0168260 AT2G44890.1 37.546 269 139 7 134 381 240 500 2.16e-48 172
Msa0168260 AT2G23180.1 39.640 222 115 5 178 389 300 512 9.16e-48 170
Msa0168260 AT4G39480.1 35.714 280 150 6 134 389 240 513 4.07e-47 168
Msa0168260 AT4G32170.1 35.165 273 154 7 133 389 238 503 5.36e-47 168
Msa0168260 AT5G52320.1 32.374 278 162 5 127 388 234 501 6.02e-47 167
Msa0168260 AT5G52320.2 33.205 259 147 5 127 369 234 482 1.81e-46 166
Msa0168260 AT2G44890.2 36.194 268 126 7 134 381 240 482 6.84e-46 164
Msa0168260 AT4G39490.1 33.451 284 156 5 133 389 239 516 1.01e-45 165
Msa0168260 AT4G39500.1 35.507 276 156 7 125 389 202 466 2.10e-45 163
Msa0168260 AT4G39500.2 35.507 276 156 7 125 389 252 516 2.64e-45 164
Msa0168260 AT1G47620.1 34.783 276 154 6 133 389 247 515 2.56e-44 161
Msa0168260 AT4G39510.1 35.036 274 155 5 133 389 238 505 3.30e-44 160
Msa0168260 AT1G69500.1 33.871 310 151 8 100 360 194 498 7.10e-44 160
Msa0168260 AT5G02900.1 34.146 246 138 4 133 358 208 449 1.99e-40 149
Msa0168260 AT1G57750.2 38.776 196 107 3 127 312 233 425 5.06e-38 142
Msa0168260 AT5G52400.1 26.971 241 164 5 123 358 257 490 4.22e-21 95.5
Msa0168260 AT3G53130.1 28.372 215 145 5 135 344 286 496 2.45e-20 93.2
Msa0168260 AT5G24900.2 32.778 180 107 5 182 356 209 379 8.12e-19 87.8
Msa0168260 AT2G46660.1 25.379 264 188 6 131 389 269 528 8.45e-19 88.6
Msa0168260 AT5G36110.1 27.160 243 159 5 122 357 215 446 1.21e-18 87.8
Msa0168260 AT5G24900.1 32.778 180 107 5 182 356 326 496 2.62e-18 87.0
Msa0168260 AT3G48300.1 28.870 239 148 6 129 356 223 450 3.05e-18 86.7
Msa0168260 AT3G48300.2 28.870 239 148 6 129 356 225 452 3.07e-18 86.7
Msa0168260 AT3G61040.1 30.213 235 144 7 135 356 233 460 3.61e-18 86.7
Msa0168260 AT1G01190.1 26.923 234 160 5 134 363 278 504 7.11e-18 85.9
Msa0168260 AT1G01190.2 26.923 234 160 5 134 363 283 509 7.80e-18 85.9
Msa0168260 AT2G46950.1 26.894 264 165 7 141 387 316 568 1.84e-17 84.7
Msa0168260 AT4G13770.1 28.700 223 144 5 129 341 231 448 2.33e-17 84.0
Msa0168260 AT5G24950.1 30.942 223 131 8 137 345 238 451 2.94e-17 84.0
Msa0168260 AT3G14640.1 27.372 274 148 10 132 374 256 509 6.73e-17 82.8
Msa0168260 AT3G48310.1 29.439 214 137 6 129 335 226 432 6.99e-17 82.8
Msa0168260 AT3G14640.2 27.737 274 147 10 132 374 278 531 9.18e-17 82.4
Msa0168260 AT2G26170.1 25.000 276 185 6 127 390 257 522 1.67e-16 81.6
Msa0168260 AT3G14680.1 28.216 241 143 9 132 356 255 481 1.71e-16 81.6
Msa0168260 AT3G14660.2 27.801 241 144 9 132 356 109 335 1.77e-16 80.5
Msa0168260 AT3G14630.2 26.360 239 150 8 132 356 306 532 1.88e-16 81.6
Msa0168260 AT3G14630.1 26.360 239 150 8 132 356 251 477 2.07e-16 81.3
Msa0168260 AT2G26170.2 25.000 276 185 6 127 390 174 439 2.15e-16 80.9
Msa0168260 AT3G14660.1 27.801 241 144 9 132 356 255 481 3.22e-16 80.9
Msa0168260 AT3G14620.1 24.464 233 157 6 134 356 261 484 3.82e-16 80.5
Msa0168260 AT5G24910.1 27.350 234 142 5 130 356 289 501 5.14e-16 80.1
Msa0168260 AT3G61880.1 23.830 235 172 5 134 364 272 503 9.63e-16 79.3
Msa0168260 AT1G64930.1 26.776 183 127 3 179 357 297 476 1.19e-15 79.0
Msa0168260 AT3G61880.2 23.830 235 172 5 134 364 272 503 1.64e-15 78.6
Msa0168260 AT2G42250.1 30.556 180 108 7 180 352 301 470 1.71e-15 78.6
Msa0168260 AT4G13290.1 30.108 186 121 4 155 337 256 435 2.15e-15 78.2
Msa0168260 AT2G42850.1 27.982 218 135 6 134 341 233 438 2.43e-15 77.8
Msa0168260 AT2G46960.1 27.805 205 132 5 189 387 205 399 4.16e-15 77.0
Msa0168260 AT2G46960.2 27.805 205 132 5 189 387 321 515 5.65e-15 77.0
Msa0168260 AT1G64940.1 28.804 184 118 4 179 356 299 475 5.76e-15 77.0
Msa0168260 AT3G14690.2 29.046 241 141 9 132 356 290 516 6.15e-15 77.0
Msa0168260 AT3G14690.1 29.046 241 141 9 132 356 255 481 8.29e-15 76.3
Msa0168260 AT4G27710.1 27.039 233 142 7 167 384 293 512 1.01e-14 76.3
Msa0168260 AT3G25180.1 25.571 219 152 5 151 364 269 481 1.13e-14 75.9
Msa0168260 AT2G26710.1 27.232 224 149 4 141 356 267 484 1.46e-14 75.5
Msa0168260 AT3G48270.1 29.412 153 100 2 186 335 284 431 1.83e-14 75.1
Msa0168260 AT1G31800.1 28.497 193 130 5 168 357 351 538 1.90e-14 75.5
Msa0168260 AT3G48290.1 25.417 240 143 8 142 356 226 454 6.15e-14 73.6
Msa0168260 AT3G48280.1 31.373 153 97 3 186 335 284 431 6.58e-14 73.6
Msa0168260 AT4G13310.1 30.968 155 99 3 186 337 293 442 8.36e-14 73.2
Msa0168260 AT1G64950.1 27.473 182 123 3 179 356 298 474 1.10e-13 72.8
Msa0168260 AT1G11600.1 23.853 218 162 2 175 389 293 509 1.52e-13 72.4
Msa0168260 AT5G42590.1 29.515 227 144 5 134 349 236 457 3.62e-13 71.2
Msa0168260 AT3G48290.2 29.878 164 107 4 196 356 322 480 5.95e-13 70.5
Msa0168260 AT3G28740.1 26.222 225 138 6 133 349 248 452 6.45e-13 70.5
Msa0168260 AT2G29090.2 24.828 290 187 6 104 384 203 470 6.69e-13 70.5
Msa0168260 AT2G29090.1 24.828 290 187 6 104 384 203 470 6.69e-13 70.5
Msa0168260 AT4G37340.1 25.000 224 150 6 133 351 239 449 8.76e-13 70.1
Msa0168260 AT2G29090.3 24.828 290 187 6 104 384 108 375 1.05e-12 69.3
Msa0168260 AT3G03470.1 22.936 218 159 3 180 389 293 509 1.72e-12 69.3
Msa0168260 AT4G37330.1 24.074 216 150 3 129 341 233 437 2.00e-12 68.9
Msa0168260 AT2G30770.1 27.027 222 141 7 132 342 235 446 4.02e-12 68.2
Msa0168260 AT2G45550.1 24.651 215 152 5 145 356 264 471 4.47e-12 67.8
Msa0168260 AT2G12190.1 25.824 182 128 3 179 356 298 476 7.32e-12 67.4
Msa0168260 AT5G24960.1 29.279 222 136 7 137 345 239 452 1.12e-11 66.6
Msa0168260 AT2G25160.1 25.926 243 150 9 133 356 248 479 1.27e-11 66.6
Msa0168260 AT4G31940.1 28.205 195 126 7 188 375 316 503 1.38e-11 66.6
Msa0168260 AT5G57260.1 23.744 219 149 5 129 335 231 443 1.47e-11 66.2
Msa0168260 AT5G38450.1 29.496 139 89 2 218 356 356 485 1.69e-11 66.2
Msa0168260 AT3G26230.1 23.827 277 188 7 125 386 224 492 2.16e-11 65.9
Msa0168260 AT5G25900.1 26.515 264 168 11 119 376 251 494 2.98e-11 65.5
Msa0168260 AT5G06900.1 24.400 250 162 9 131 365 237 474 3.31e-11 65.1
Msa0168260 AT5G36110.2 27.711 166 112 3 122 280 215 379 3.41e-11 64.7
Msa0168260 AT4G31970.1 27.273 187 122 7 188 367 315 494 3.70e-11 65.1
Msa0168260 AT3G20940.1 22.553 235 158 7 130 353 251 472 3.84e-11 65.1
Msa0168260 AT1G67110.1 25.517 145 98 3 212 356 345 479 3.98e-11 65.1
Msa0168260 AT2G45570.1 29.756 205 125 9 145 341 264 457 5.20e-11 64.7
Msa0168260 AT1G66540.2 24.775 222 146 6 133 349 67 272 5.46e-11 63.9
Msa0168260 AT2G27000.1 23.502 217 149 7 148 353 259 469 7.25e-11 64.3
Msa0168260 AT1G66540.1 24.775 222 146 6 133 349 126 331 7.56e-11 63.5
Msa0168260 AT3G19270.2 24.111 253 155 8 121 357 206 437 7.93e-11 63.9
Msa0168260 AT5G06905.1 25.941 239 154 7 133 351 234 469 9.56e-11 63.9
Msa0168260 AT3G19270.1 24.111 253 155 8 121 357 206 437 9.83e-11 63.5

Find 266 sgRNAs with CRISPR-Local

Find 716 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTAACAAACGCGGTTT+CGG 0.197893 1_4:+50745660 None:intergenic
GGGGATTGTGGAGGGTGTTT+TGG 0.202962 1_4:+50738648 None:intergenic
TTGGCATTATGAGGGAGTTT+AGG 0.203209 1_4:-50737352 Msa0168260:CDS
CAGGGATCATGAGGCAGTTT+AGG 0.209613 1_4:-50744892 Msa0168260:five_prime_UTR
ATGCGGCGATTCCATTTCTA+TGG 0.248237 1_4:-50745600 Msa0168260:five_prime_UTR
GATGGAAAGTGGAGCTTTAT+TGG 0.250491 1_4:-50745007 Msa0168260:five_prime_UTR
CGGCACTCACGTGGTTCTTT+TGG 0.257559 1_4:-50745342 Msa0168260:five_prime_UTR
TGGGAAGGTCCGAGAAAATA+TGG 0.258104 1_4:-50745081 Msa0168260:five_prime_UTR
TGGGAAGGTCTGAGAAAATA+TGG 0.259141 1_4:-50737541 Msa0168260:CDS
CTGCACTCACGTGGTTCTTT+TGG 0.262457 1_4:-50737802 Msa0168260:CDS
GCTTTAACAAACGCGGTTTC+GGG 0.262968 1_4:+50745661 None:intergenic
ATGCGCTTCTCGATCTTTAC+TGG 0.272119 1_4:+50737254 None:intergenic
CCAAATGGAACTCGAAATAT+TGG 0.289090 1_4:-50746289 Msa0168260:five_prime_UTR
TGGCATTATGAGGGAGTTTA+GGG 0.289127 1_4:-50737351 Msa0168260:CDS
CTACGCTTCTCAATCTTTAC+CGG 0.302729 1_4:+50744794 None:intergenic
GTGATAAGCTTTATTCTTGC+TGG 0.302739 1_4:-50737842 Msa0168260:CDS
CAGATGAAGAGGTTGGTTAT+TGG 0.303753 1_4:-50737371 Msa0168260:CDS
AATAGTTAGGGAAAAGAAAA+AGG 0.313712 1_4:-50745497 Msa0168260:five_prime_UTR
GTAATAAGCTTTATTCTTGC+TGG 0.318238 1_4:-50745382 Msa0168260:five_prime_UTR
AGGGATCATGAGGCAGTTTA+GGG 0.320347 1_4:-50744891 Msa0168260:five_prime_UTR
GGTTGGTTATTGGCATTATG+AGG 0.323632 1_4:-50737361 Msa0168260:CDS
TTACGATGAGGTGAAGGATA+TGG 0.331983 1_4:-50737708 Msa0168260:CDS
TTACAATGAGGTGAAGGATA+TGG 0.331983 1_4:-50745248 Msa0168260:five_prime_UTR
TGAGATTCTTAAGGAAGTTA+TGG 0.332305 1_4:-50745290 Msa0168260:five_prime_UTR
CTGGGCCGAGGGTGTGTTTA+GGG 0.335396 1_4:-50737412 Msa0168260:CDS
GTCGAGCTGACGATGGAAAA+TGG 0.339965 1_4:-50737478 Msa0168260:CDS
GCTGGGCCGAGGGTGTGTTT+AGG 0.340311 1_4:-50737413 Msa0168260:CDS
TTCTTCACTTTCCATAGAAA+TGG 0.343000 1_4:+50745589 None:intergenic
GGGATTTAGTGTTGAATTCA+TGG 0.351461 1_4:+50745869 None:intergenic
AGGTGGAGGAAGGGATAGTT+TGG 0.353372 1_4:+50738545 None:intergenic
AATATTTGCATAATCGCGTT+TGG 0.357467 1_4:-50745715 Msa0168260:five_prime_UTR
CACCTTTCATTATTGAAGTA+AGG 0.357913 1_4:+50737282 None:intergenic
GAGATTCTTAAGGAAGTTAT+GGG 0.365277 1_4:-50745289 Msa0168260:five_prime_UTR
CGATCCCTCTTCGAGTTTCT+CGG 0.365393 1_4:-50738409 Msa0168260:CDS
AGGTGGAGGAAGGGACAGTT+TGG 0.366147 1_4:+50746085 None:intergenic
GATTTGTCGTTGAACCTTCC+AGG 0.367201 1_4:+50745897 None:intergenic
AGCTTATCCTATTGTCGGTT+CGG 0.368520 1_4:-50746163 Msa0168260:five_prime_UTR
ATGGAAAGTGGAGCTTTATT+GGG 0.370253 1_4:-50745006 Msa0168260:five_prime_UTR
AAAATCAGCGTTGGAATCAT+TGG 0.370944 1_4:-50745464 Msa0168260:five_prime_UTR
CCCAAAGCTTATCCTATTGT+CGG 0.373755 1_4:-50746168 Msa0168260:five_prime_UTR
TCCTTGGCATCCACCGGAAC+TGG 0.375599 1_4:+50737641 None:intergenic
TTTGGGAATGGCGGTGGAGG+AGG 0.384078 1_4:+50746185 None:intergenic
GAAAATATGGGGACCCGATT+GGG 0.385769 1_4:-50745068 Msa0168260:five_prime_UTR
AGGAGCCGAAGGGGCGGTGG+AGG 0.391442 1_4:+50738518 None:intergenic
AATGGATCCTTATACTTATC+CGG 0.392782 1_4:-50737444 Msa0168260:CDS
TCAACCCCTTTATCCATTGC+AGG 0.393076 1_4:+50744863 None:intergenic
CCAATATTTCGAGTTCCATT+TGG 0.393527 1_4:+50746289 None:intergenic
CGAGAAACTCGACGAGGGTT+TGG 0.394878 1_4:+50745950 None:intergenic
GTGGTTCCTGCAATGGATAA+AGG 0.395645 1_4:-50744869 Msa0168260:five_prime_UTR
CAAACCCTCGTCGAGTTTCT+CGG 0.396767 1_4:-50745949 Msa0168260:five_prime_UTR
CAGATGAAGAGGGTTGTTGC+AGG 0.398887 1_4:-50744911 Msa0168260:five_prime_UTR
TTCATCCTCCACCGCGCCTT+CGG 0.399589 1_4:-50746063 Msa0168260:five_prime_UTR
GGTAATGAAAGGTGGCTTCC+CGG 0.399634 1_4:-50744813 Msa0168260:five_prime_UTR
CCAATGTTTCGGATTCCATT+TGG 0.400490 1_4:+50738734 None:intergenic
TAACAAAGAAACCAATGTTT+CGG 0.403693 1_4:+50738723 None:intergenic
TGGTTCCTGCAATGGATAAA+GGG 0.406382 1_4:-50744868 Msa0168260:five_prime_UTR
GTTCCATTTGGTACGTAACT+TGG 0.407869 1_4:+50746301 None:intergenic
TAAGGAAGTTATGGGAAAAT+CGG 0.407998 1_4:-50745281 Msa0168260:five_prime_UTR
GGGAGCCGAAGGCGCGGTGG+AGG 0.417628 1_4:+50746058 None:intergenic
GACTCGCCACAAGAATAGTT+AGG 0.419831 1_4:-50745510 Msa0168260:five_prime_UTR
GCTGGGCCGAGGGTGTGTTT+AGG 0.420858 1_4:-50744953 Msa0168260:five_prime_UTR
GATGGAAAATGGAGCTTTGT+TGG 0.421609 1_4:-50737467 Msa0168260:CDS
CCAATGATAGGGTATGAGTT+GGG 0.423249 1_4:+50738628 None:intergenic
AGCAGGAGCCGAAGGGGCGG+TGG 0.424339 1_4:+50738515 None:intergenic
TCCTTACCATCCACGGGAAC+CGG 0.424534 1_4:+50745181 None:intergenic
TTCTTCACTAATGTTCCATC+TGG 0.425736 1_4:+50737596 None:intergenic
GGAAACACAGAACCAATGAT+AGG 0.426161 1_4:+50738616 None:intergenic
ACCGACAATAGGATAAGCTT+TGG 0.427374 1_4:+50746167 None:intergenic
CACCTTTCATTACCGAAGTA+AGG 0.430332 1_4:+50744822 None:intergenic
TTTGTCCTCCACCGCCCCTT+CGG 0.430781 1_4:-50738523 Msa0168260:CDS
GAAGCCGTCGCTGACGTAAG+AGG 0.434804 1_4:-50745532 Msa0168260:five_prime_UTR
GCAAAAGCCGAACCGACAAT+AGG 0.436276 1_4:+50746156 None:intergenic
AGGTCGAAACTCAGCCCAAT+CGG 0.438283 1_4:+50745054 None:intergenic
CAGGGTTTGCCGTGAAGACT+TGG 0.441417 1_4:+50746034 None:intergenic
AGGGTATGAGTTGGGGATTG+TGG 0.446758 1_4:+50738636 None:intergenic
GGGAAGGTCTGAGAAAATAT+GGG 0.449056 1_4:-50737540 Msa0168260:CDS
GAAAATATGGGGATCCGATT+GGG 0.454172 1_4:-50737528 Msa0168260:CDS
AGAAAATATGGGGACCCGAT+TGG 0.455637 1_4:-50745069 Msa0168260:five_prime_UTR
GACATATCATATATATGCTA+TGG 0.458045 1_4:-50745101 Msa0168260:five_prime_UTR
GGGAAGGTCCGAGAAAATAT+GGG 0.460625 1_4:-50745080 Msa0168260:five_prime_UTR
AGAAAATATGGGGATCCGAT+TGG 0.462705 1_4:-50737529 Msa0168260:CDS
ATCATCGTAGGCTGCTTCCT+TGG 0.463298 1_4:+50737625 None:intergenic
CCGCATTATGCGAGAGTATG+AGG 0.464414 1_4:-50745213 Msa0168260:five_prime_UTR
AGAATGTGTTGCACCACAGC+AGG 0.465654 1_4:+50746015 None:intergenic
CCCAACTCATACCCTATCAT+TGG 0.466137 1_4:-50738628 Msa0168260:CDS
TGATAAGCTTTATTCTTGCT+GGG 0.466948 1_4:-50737841 Msa0168260:CDS
TGCGTATCATGTATATGCTA+TGG 0.467152 1_4:-50737561 Msa0168260:CDS
TCAGAAGCTTCAGAGAGAAT+AGG 0.469733 1_4:+50745793 None:intergenic
GGGGCGGTGGAGGACAAAGG+TGG 0.470072 1_4:+50738528 None:intergenic
GAGATTGTATCCTCCAGTTC+CGG 0.471458 1_4:-50737654 Msa0168260:CDS
GCGGTGGAGGACAAAGGTGG+AGG 0.473309 1_4:+50738531 None:intergenic
TAATAAGCTTTATTCTTGCT+GGG 0.473900 1_4:-50745381 Msa0168260:five_prime_UTR
TCCTTTCCTAAACACACCCT+CGG 0.475650 1_4:+50744947 None:intergenic
TGGAGGAAGGGACAGTTTGG+AGG 0.476228 1_4:+50746088 None:intergenic
TTGGGAATGGCGGTGGAGGA+GGG 0.476891 1_4:+50746186 None:intergenic
GTGCTTCCAGCGATGGATGA+AGG 0.478116 1_4:-50737329 Msa0168260:CDS
AGCTTTGGGAATGGCGGTGG+AGG 0.482279 1_4:+50746182 None:intergenic
GATGGAACATTAGTGAAGAA+AGG 0.482838 1_4:-50737593 Msa0168260:CDS
AGAATGTGTTGCACCACGGC+AGG 0.484109 1_4:+50738475 None:intergenic
GTGAAGAAAATATTAAATGT+TGG 0.484563 1_4:-50745574 Msa0168260:five_prime_UTR
TATCCTCCGGTTCCCGTGGA+TGG 0.485722 1_4:-50745187 Msa0168260:five_prime_UTR
GATGGTACTTTAGTGAAGAA+AGG 0.486216 1_4:-50745133 Msa0168260:five_prime_UTR
GTATGAGTTGGGGATTGTGG+AGG 0.486724 1_4:+50738639 None:intergenic
GTTTAGGGTGGTTCCTGCAA+TGG 0.488197 1_4:-50744876 Msa0168260:five_prime_UTR
GTTTAGGGTGCTTCCAGCGA+TGG 0.488226 1_4:-50737336 Msa0168260:CDS
TGTCGAGAATGAGATTCTTA+AGG 0.488241 1_4:-50745299 Msa0168260:five_prime_UTR
TATGAGTTGGGGATTGTGGA+GGG 0.488899 1_4:+50738640 None:intergenic
TCAACACTGACGGTGAAACC+TGG 0.488909 1_4:-50745915 Msa0168260:five_prime_UTR
ATTGTATCTTACGTACCAAA+TGG 0.489774 1_4:-50738749 Msa0168260:CDS
ATATCCATTGTATGCGGCGG+TGG 0.490819 1_4:+50746118 None:intergenic
GAAGCCGTCGCTGAAGTAAG+AGG 0.493725 1_4:-50737992 Msa0168260:CDS
TGGAGGATGAAGGTGGAGGA+AGG 0.493809 1_4:+50746075 None:intergenic
TTGTATGCGGCGGTGGAAGT+TGG 0.496803 1_4:+50746125 None:intergenic
TCCGGTTCCCGTGGATGGTA+AGG 0.497016 1_4:-50745182 Msa0168260:five_prime_UTR
TGTATAAACTAAGGTGGTGT+AGG 0.499838 1_4:-50744743 Msa0168260:intron
ACTTCCACCGCCTCATACAA+TGG 0.500524 1_4:-50738582 Msa0168260:CDS
GTAAGGTGTGCAGCGAACTC+TGG 0.500831 1_4:+50744839 None:intergenic
TTCCATTTGGTACGTAACTT+GGG 0.502206 1_4:+50746302 None:intergenic
GCTCGACTCAACCACCTCTC+AGG 0.503978 1_4:+50737494 None:intergenic
AGGTCGAAACTCAGCCCAAT+CGG 0.504301 1_4:+50737514 None:intergenic
AGAAAAGACAACCTTGGAAT+CGG 0.504350 1_4:-50737927 Msa0168260:CDS
AAAATGGAGCTTTGTTGGAA+TGG 0.504854 1_4:-50737462 Msa0168260:CDS
TGGAGGACAAAGGTGGAGGA+AGG 0.508548 1_4:+50738535 None:intergenic
GAGTATGAGGTTGTATCCTC+CGG 0.509102 1_4:-50745200 Msa0168260:five_prime_UTR
ATAAGCTTTGGGAATGGCGG+TGG 0.510582 1_4:+50746179 None:intergenic
TTTAGTGTTGAATTCATGGC+TGG 0.512761 1_4:+50745873 None:intergenic
CGGCTCCCGCCAAGTCTTCA+CGG 0.512964 1_4:-50746043 Msa0168260:five_prime_UTR
TTCTTCACTAAAGTACCATC+CGG 0.514049 1_4:+50745136 None:intergenic
GCTCGACTCAACCATCTCTC+AGG 0.514291 1_4:+50745034 None:intergenic
TGCTTCCAGCGATGGATGAA+GGG 0.514603 1_4:-50737328 Msa0168260:CDS
AGCCGCTTCCTTACCATCCA+CGG 0.515596 1_4:+50745174 None:intergenic
AAAAGATTCATCTGAATGAC+CGG 0.516142 1_4:+50737877 None:intergenic
GGTTTGCCGTGAAGACTTGG+CGG 0.518656 1_4:+50746037 None:intergenic
AAATCCATTGTATGAGGCGG+TGG 0.519389 1_4:+50738578 None:intergenic
TCTTTCCCTAAACACACCCT+CGG 0.519430 1_4:+50737407 None:intergenic
CAAAATATCCACCGATTCCA+AGG 0.519645 1_4:+50737916 None:intergenic
TACTCTCGCATAATGCGGCA+TGG 0.519856 1_4:+50745218 None:intergenic
TTTGTTGTAGCAAGGGAAGT+TGG 0.522871 1_4:+50738447 None:intergenic
TTTGTTGTAGCAAGGGAAGT+TGG 0.522871 1_4:+50745987 None:intergenic
CTCTTCGAGTTTCTCGGTAA+CGG 0.523335 1_4:-50738403 Msa0168260:CDS
GAAGGCGCGGTGGAGGATGA+AGG 0.524894 1_4:+50746065 None:intergenic
GTGAGACCTTTGTTGTAGCA+AGG 0.525391 1_4:+50745979 None:intergenic
CCGACAATAGGATAAGCTTT+GGG 0.526954 1_4:+50746168 None:intergenic
GGTGTGTTTAGGAAAGGAAA+TGG 0.527384 1_4:-50744942 Msa0168260:five_prime_UTR
ACTTCCACCGCCGCATACAA+TGG 0.527801 1_4:-50746122 Msa0168260:five_prime_UTR
GTTGGTTATTGGCATTATGA+GGG 0.528173 1_4:-50737360 Msa0168260:CDS
ATGGAACATTAGTGAAGAAA+GGG 0.533849 1_4:-50737592 Msa0168260:CDS
GGAGGATGAAGGTGGAGGAA+GGG 0.533951 1_4:+50746076 None:intergenic
AACCCAAGTTACGTACCAAA+TGG 0.534813 1_4:-50746304 Msa0168260:five_prime_UTR
TCCCGTGGATGGTAAGGAAG+CGG 0.536915 1_4:-50745176 Msa0168260:five_prime_UTR
CACCTTACTTCAATAATGAA+AGG 0.538300 1_4:-50737284 Msa0168260:CDS
GATGACTGAGCAGGAGCCGA+AGG 0.540330 1_4:+50738507 None:intergenic
ACCAATGATAGGGTATGAGT+TGG 0.541087 1_4:+50738627 None:intergenic
GGTCGAAACTCAGCCCAATC+GGG 0.542498 1_4:+50745055 None:intergenic
AACGCGGTTTCGGGAAGAGA+AGG 0.543234 1_4:+50745670 None:intergenic
GCGTATCATGTATATGCTAT+GGG 0.544791 1_4:-50737560 Msa0168260:CDS
GAAGACTTGGCGGGAGCCGA+AGG 0.545040 1_4:+50746047 None:intergenic
GCTGCTTCCTTGGCATCCAC+CGG 0.546000 1_4:+50737635 None:intergenic
AAGAGGGATCGATGAAATGT+AGG 0.546407 1_4:+50738421 None:intergenic
ATGGTACTTTAGTGAAGAAA+GGG 0.547566 1_4:-50745132 Msa0168260:five_prime_UTR
GTAGGACCTTTGTTGTAGCA+AGG 0.550558 1_4:+50738439 None:intergenic
TATGCGGCGGTGGAAGTTGG+CGG 0.552460 1_4:+50746128 None:intergenic
ACATATCATATATATGCTAT+GGG 0.553168 1_4:-50745100 Msa0168260:five_prime_UTR
TCCAGTTCCGGTGGATGCCA+AGG 0.553592 1_4:-50737642 Msa0168260:CDS
ACTCGCCACAAGAATAGTTA+GGG 0.555371 1_4:-50745509 Msa0168260:five_prime_UTR
GTTTGCCGTGAAGACTTGGC+GGG 0.556413 1_4:+50746038 None:intergenic
TGTCAGAAATCCATTGTATG+AGG 0.557023 1_4:+50738572 None:intergenic
TGGTTGAGTCGAGCTGATGA+TGG 0.559289 1_4:-50745025 Msa0168260:five_prime_UTR
CTTTAGTGAAGAAAGGGTGG+AGG 0.559684 1_4:-50745126 Msa0168260:five_prime_UTR
GTACTTTAGTGAAGAAAGGG+TGG 0.559684 1_4:-50745129 Msa0168260:five_prime_UTR
AAAGTGGAGCTTTATTGGGA+TGG 0.559988 1_4:-50745002 Msa0168260:five_prime_UTR
GCTTGAAGAAAAGACAACCT+TGG 0.560057 1_4:-50737933 Msa0168260:CDS
GTTCTTACAGATGAAGAGGT+TGG 0.560529 1_4:-50737378 Msa0168260:CDS
TAGGACCTTTGTTGTAGCAA+GGG 0.561102 1_4:+50738440 None:intergenic
GAAGGGGCGGTGGAGGACAA+AGG 0.561542 1_4:+50738525 None:intergenic
GTAAGGTGTGAATCAAACTC+TGG 0.564216 1_4:+50737299 None:intergenic
GATTCGTGAGCTGTCATCAA+AGG 0.565901 1_4:+50745639 None:intergenic
CCAAATGGAATCCGAAACAT+TGG 0.566183 1_4:-50738734 Msa0168260:CDS
TGGCATTCTTGCAGATGAAG+AGG 0.566621 1_4:-50744922 Msa0168260:five_prime_UTR
TCAACCCCTTCATCCATCGC+TGG 0.566996 1_4:+50737323 None:intergenic
TTGTATGAGGCGGTGGAAGT+TGG 0.568583 1_4:+50738585 None:intergenic
TGAGACCTTTGTTGTAGCAA+GGG 0.569086 1_4:+50745980 None:intergenic
AGTTAGTTACGATGAGGTGA+AGG 0.569800 1_4:-50737714 Msa0168260:CDS
AACTTCCCTTGCTACAACAA+AGG 0.571997 1_4:-50738445 Msa0168260:CDS
AACTTCCCTTGCTACAACAA+AGG 0.571997 1_4:-50745985 Msa0168260:five_prime_UTR
GGAGGACAAAGGTGGAGGAA+GGG 0.572045 1_4:+50738536 None:intergenic
TACGCTTCTCAATCTTTACC+GGG 0.572762 1_4:+50744795 None:intergenic
GCCGCTTCCTTACCATCCAC+GGG 0.572839 1_4:+50745175 None:intergenic
TGGCGTTCTTACAGATGAAG+AGG 0.573982 1_4:-50737382 Msa0168260:CDS
GAACATTAGTGAAGAAAGGG+TGG 0.574370 1_4:-50737589 Msa0168260:CDS
AATCGCGTTTGGATTCGATC+CGG 0.575283 1_4:-50745704 Msa0168260:five_prime_UTR
GATGGATCCTTATAGTTATG+CGG 0.576921 1_4:-50744984 Msa0168260:five_prime_UTR
GGCATTCTTGCAGATGAAGA+GGG 0.578940 1_4:-50744921 Msa0168260:five_prime_UTR
CACCTTACTTCGGTAATGAA+AGG 0.580169 1_4:-50744824 Msa0168260:five_prime_UTR
CAATGATAGGGTATGAGTTG+GGG 0.580382 1_4:+50738629 None:intergenic
GTTGTATCCTCCGGTTCCCG+TGG 0.580627 1_4:-50745191 Msa0168260:five_prime_UTR
ATCATATATATGCTATGGGA+AGG 0.581409 1_4:-50745096 Msa0168260:five_prime_UTR
GTTCGCTGCACACCTTACTT+CGG 0.583365 1_4:-50744834 Msa0168260:five_prime_UTR
TATTATCAAACGTAAAACGT+TGG 0.585019 1_4:+50745734 None:intergenic
ACTCTCGCATAATGCGGCAT+GGG 0.586480 1_4:+50745219 None:intergenic
AAAGACAACCTTGGAATCGG+TGG 0.587007 1_4:-50737924 Msa0168260:CDS
GCGGTGGAGGATGAAGGTGG+AGG 0.587295 1_4:+50746071 None:intergenic
GGCGCGGTGGAGGATGAAGG+TGG 0.589880 1_4:+50746068 None:intergenic
GTTTGCCGTGATGACTGAGC+AGG 0.590226 1_4:+50738498 None:intergenic
AGATGAAGAGGGTTGTTGCA+GGG 0.591297 1_4:-50744910 Msa0168260:five_prime_UTR
CTTGGCGGGAGCCGAAGGCG+CGG 0.591685 1_4:+50746052 None:intergenic
GGCGGGAGCCGAAGGCGCGG+TGG 0.592240 1_4:+50746055 None:intergenic
CTGAGCAGGAGCCGAAGGGG+CGG 0.594123 1_4:+50738512 None:intergenic
TGTTAATTACAATGAGGTGA+AGG 0.594869 1_4:-50745254 Msa0168260:five_prime_UTR
CTGAGTTTCGACCTGAGAGA+TGG 0.594874 1_4:-50745045 Msa0168260:five_prime_UTR
GAATGTGTTGCACCACGGCA+GGG 0.595117 1_4:+50738476 None:intergenic
GCCGAGGGTGTGTTTAGGAA+AGG 0.603614 1_4:-50744948 Msa0168260:five_prime_UTR
GAAACACAGAACCAATGATA+GGG 0.605794 1_4:+50738617 None:intergenic
CTCGTCGAGTTTCTCGGCGA+CGG 0.607745 1_4:-50745943 Msa0168260:five_prime_UTR
GGTGTGTTTAGGGAAAGAAA+TGG 0.608381 1_4:-50737402 Msa0168260:CDS
ATGACTGAGCAGGAGCCGAA+GGG 0.610143 1_4:+50738508 None:intergenic
CTTACTTCGGTAATGAAAGG+TGG 0.610440 1_4:-50744821 Msa0168260:five_prime_UTR
ATCATGTATATGCTATGGGA+AGG 0.611232 1_4:-50737556 Msa0168260:CDS
CTTACTTCAATAATGAAAGG+TGG 0.615026 1_4:-50737281 Msa0168260:CDS
TTTAGTGAAGAAAGGGTGGA+GGG 0.615161 1_4:-50745125 Msa0168260:five_prime_UTR
CTTCACGGCAAACCCTGCTG+TGG 0.615197 1_4:-50746028 Msa0168260:five_prime_UTR
AGAGAAGGGAGAAGATACTC+CGG 0.615710 1_4:+50745685 None:intergenic
GACGGTATCTTCAACACTGA+CGG 0.616254 1_4:-50745925 Msa0168260:five_prime_UTR
GTCGAGCTGATGATGGAAAG+TGG 0.616323 1_4:-50745018 Msa0168260:five_prime_UTR
GGGTTGTTGCAGGGATCATG+AGG 0.616630 1_4:-50744901 Msa0168260:five_prime_UTR
CACTGACGGTGAAACCTGGA+AGG 0.616639 1_4:-50745911 Msa0168260:five_prime_UTR
CAACTTCAGCGGCACTCACG+TGG 0.616643 1_4:-50745351 Msa0168260:five_prime_UTR
AACGGTATCTTCAACACTGA+CGG 0.618049 1_4:-50738385 Msa0168260:intron
ATTGTATCCTCCAGTTCCGG+TGG 0.618690 1_4:-50737651 Msa0168260:CDS
CAACTTCAGCTGCACTCACG+TGG 0.619047 1_4:-50737811 Msa0168260:CDS
GATCATGAGGCAGTTTAGGG+TGG 0.621251 1_4:-50744888 Msa0168260:five_prime_UTR
AATAGGATAAGCTTTGGGAA+TGG 0.621853 1_4:+50746173 None:intergenic
AAGTCCTCTTACTTCAGCGA+CGG 0.623282 1_4:+50737988 None:intergenic
TTGGCATCCACCGGAACTGG+AGG 0.626326 1_4:+50737644 None:intergenic
CATCACGGCAAACCCTGCCG+TGG 0.626725 1_4:-50738488 Msa0168260:CDS
ACGCGGTTTCGGGAAGAGAA+GGG 0.629250 1_4:+50745671 None:intergenic
GCTTCCAGCGATGGATGAAG+GGG 0.630676 1_4:-50737327 Msa0168260:CDS
CGGCTCCTGCTCAGTCATCA+CGG 0.633141 1_4:-50738503 Msa0168260:CDS
GAATGTGTTGCACCACAGCA+GGG 0.637916 1_4:+50746016 None:intergenic
TGGTTGAGTCGAGCTGACGA+TGG 0.638987 1_4:-50737485 Msa0168260:CDS
ATCTGGCAAAACATCATCGT+AGG 0.646289 1_4:+50737613 None:intergenic
AGGATAAGCTTTGGGAATGG+CGG 0.647791 1_4:+50746176 None:intergenic
TGACTGAGCAGGAGCCGAAG+GGG 0.648695 1_4:+50738509 None:intergenic
GGAAGGTCTGAGAAAATATG+GGG 0.648867 1_4:-50737539 Msa0168260:CDS
CTGAGTTTCGACCTGAGAGG+TGG 0.648894 1_4:-50737505 Msa0168260:CDS
ATCAAAGGCTTTAACAAACG+CGG 0.649195 1_4:+50745654 None:intergenic
CCTCATACTCTCGCATAATG+CGG 0.653978 1_4:+50745213 None:intergenic
TTACCATCCACGGGAACCGG+AGG 0.654923 1_4:+50745184 None:intergenic
CAGATATCCATTGTATGCGG+CGG 0.656008 1_4:+50746115 None:intergenic
CAGAAATCCATTGTATGAGG+CGG 0.656815 1_4:+50738575 None:intergenic
GGTTCCTGCAATGGATAAAG+GGG 0.659517 1_4:-50744867 Msa0168260:five_prime_UTR
GGGCTGAGTTTCGACCTGAG+AGG 0.665153 1_4:-50737508 Msa0168260:CDS
TAAATGTTGGATCTGAGCGA+CGG 0.667424 1_4:-50745561 Msa0168260:five_prime_UTR
GTTACCGAGAAACTCGAAGA+GGG 0.669478 1_4:+50738405 None:intergenic
AATGATAGTTAGTTACGATG+AGG 0.669710 1_4:-50737720 Msa0168260:CDS
GGAAACTGTTAATTACAATG+AGG 0.670036 1_4:-50745260 Msa0168260:five_prime_UTR
TGGGAGAGATACAACTTCAG+CGG 0.679197 1_4:-50745362 Msa0168260:five_prime_UTR
GGAAGGTCCGAGAAAATATG+GGG 0.679943 1_4:-50745079 Msa0168260:five_prime_UTR
GAGTCCTCTTACGTCAGCGA+CGG 0.679977 1_4:+50745528 None:intergenic
GCTCACGAATCAGCAGTGAG+AGG 0.681342 1_4:-50745627 Msa0168260:five_prime_UTR
CAGCAGTGAGAGGTTAAATG+CGG 0.698167 1_4:-50745617 Msa0168260:five_prime_UTR
TATCAGATATCCATTGTATG+CGG 0.702249 1_4:+50746112 None:intergenic
TTTGAGAATGTGTTGCACCA+CGG 0.713899 1_4:+50738471 None:intergenic
CGTTACCGAGAAACTCGAAG+AGG 0.714744 1_4:+50738404 None:intergenic
GTCGCCGAGAAACTCGACGA+GGG 0.730239 1_4:+50745945 None:intergenic
CGTCGCCGAGAAACTCGACG+AGG 0.733977 1_4:+50745944 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATGACTTTTATTATTAA+TGG - chr1_4:50738896-50738915 Msa0168260:intron 10.0%
!! TAAAAAAAATCAAATAAAGA+TGG + chr1_4:50739983-50740002 None:intergenic 10.0%
!!! TCTTTATTTGATTTTTTTTA+AGG - chr1_4:50739983-50740002 Msa0168260:intron 10.0%
!!! CTTTATTTGATTTTTTTTAA+GGG - chr1_4:50739984-50740003 Msa0168260:intron 10.0%
!!! TCTTTTGATTTATAAATATA+TGG + chr1_4:50741847-50741866 None:intergenic 10.0%
!! ATTTGTAAAATAATTTAGAA+TGG - chr1_4:50742859-50742878 Msa0168260:intron 10.0%
!! TTTCAAATTACAAATTATTT+AGG + chr1_4:50742885-50742904 None:intergenic 10.0%
!!! ATTTTTCTATTAATCAAATA+GGG - chr1_4:50743956-50743975 Msa0168260:intron 10.0%
!!! TAAATACATTATTAGTTTTA+GGG + chr1_4:50744013-50744032 None:intergenic 10.0%
!!! TTTTTATGTACATTTATAAA+AGG - chr1_4:50744307-50744326 Msa0168260:intron 10.0%
!!! TTATTTAAAATTTTCTCTTT+TGG - chr1_4:50744437-50744456 Msa0168260:intron 10.0%
!!! TAAATGTGATATATTATTTT+TGG + chr1_4:50744530-50744549 None:intergenic 10.0%
!!! CTTATTTTATGTATAAACTA+AGG - chr1_4:50738818-50738837 Msa0168260:intron 15.0%
!!! AGATTTATTTTTATAAGACA+TGG - chr1_4:50739509-50739528 Msa0168260:intron 15.0%
!! AAAATCAAATTCATCAAATA+TGG - chr1_4:50739765-50739784 Msa0168260:intron 15.0%
!! ACTAACTATATTTATGATTA+TGG - chr1_4:50740292-50740311 Msa0168260:intron 15.0%
!! TTGATTATAATAAGATTTGT+TGG - chr1_4:50742670-50742689 Msa0168260:intron 15.0%
!! AAAGAGTAATAAATACTTAA+GGG + chr1_4:50742790-50742809 None:intergenic 15.0%
!! AAAAGAGTAATAAATACTTA+AGG + chr1_4:50742791-50742810 None:intergenic 15.0%
!!! GTATATTTTAGAATTATGAT+AGG - chr1_4:50742911-50742930 Msa0168260:intron 15.0%
!!! CATTTTTCTATTAATCAAAT+AGG - chr1_4:50743955-50743974 Msa0168260:intron 15.0%
!!! CTAAATACATTATTAGTTTT+AGG + chr1_4:50744014-50744033 None:intergenic 15.0%
!!! TGAACATAGTATTTTTTTTT+AGG - chr1_4:50744614-50744633 Msa0168260:intron 15.0%
!!! GAACATAGTATTTTTTTTTA+GGG - chr1_4:50744615-50744634 Msa0168260:intron 15.0%
!!! AACATAGTATTTTTTTTTAG+GGG - chr1_4:50744616-50744635 Msa0168260:intron 15.0%
!! GTGAAGAAAATATTAAATGT+TGG - chr1_4:50737996-50738015 Msa0168260:CDS 20.0%
!! ACATATCATATATATGCTAT+GGG - chr1_4:50738470-50738489 Msa0168260:CDS 20.0%
!!! ATTTTATGTATAAACTAAGG+TGG - chr1_4:50738821-50738840 Msa0168260:intron 20.0%
!!! TTTTACTTATTTCATAGAAC+TGG - chr1_4:50738962-50738981 Msa0168260:intron 20.0%
!! CCAAATAAGATGAAATTAAA+TGG + chr1_4:50739044-50739063 None:intergenic 20.0%
!!! CCATTTAATTTCATCTTATT+TGG - chr1_4:50739041-50739060 Msa0168260:intron 20.0%
!!! CTTCAATTTTGTTTAATAAG+CGG - chr1_4:50739233-50739252 Msa0168260:intron 20.0%
!!! TTAATTTAACTTCAACATTG+AGG - chr1_4:50739300-50739319 Msa0168260:intron 20.0%
!! AAAAAGAACCTTATAACATT+AGG + chr1_4:50739369-50739388 None:intergenic 20.0%
!!! TTTTATAAGACATGGAAATA+AGG - chr1_4:50739517-50739536 Msa0168260:intron 20.0%
!!! TTGATGAATTTGATTTTGAA+TGG + chr1_4:50739762-50739781 None:intergenic 20.0%
!! AAAAATCAAATAAAGATGGA+AGG + chr1_4:50739979-50739998 None:intergenic 20.0%
!!! TGATCATTTTGAACAAAAAA+GGG + chr1_4:50740821-50740840 None:intergenic 20.0%
!!! TTGATCATTTTGAACAAAAA+AGG + chr1_4:50740822-50740841 None:intergenic 20.0%
!! GAATGATATTTAATGTTGAA+TGG + chr1_4:50741329-50741348 None:intergenic 20.0%
!! AGTAAAAGTTGAGATTAATA+AGG - chr1_4:50741405-50741424 Msa0168260:intron 20.0%
!! TTGTGATTGTTTAAATGTTT+GGG + chr1_4:50741595-50741614 None:intergenic 20.0%
!! TTTGTGATTGTTTAAATGTT+TGG + chr1_4:50741596-50741615 None:intergenic 20.0%
!!! TTGATAATCACTTATAATCT+AGG + chr1_4:50741679-50741698 None:intergenic 20.0%
!!! ATTCTTTGAAAATATATCCA+GGG + chr1_4:50742107-50742126 None:intergenic 20.0%
!!! TATTCTTTGAAAATATATCC+AGG + chr1_4:50742108-50742127 None:intergenic 20.0%
!!! AAACGACTTAAAATTTTGAA+CGG + chr1_4:50742704-50742723 None:intergenic 20.0%
!!! TTCAAAATTTTAAGTCGTTT+TGG - chr1_4:50742704-50742723 Msa0168260:intron 20.0%
!!! TAAATACTTAAGGGTATAAT+AGG + chr1_4:50742781-50742800 None:intergenic 20.0%
!! GTGATATGTAATCTATATAA+AGG + chr1_4:50742945-50742964 None:intergenic 20.0%
!!! AATACGTTTTAAATATGTGA+GGG - chr1_4:50743111-50743130 Msa0168260:intron 20.0%
!! TATATAATACGACAATGATA+CGG + chr1_4:50743723-50743742 None:intergenic 20.0%
!!! GTTTCATTTCAATTTCTTTT+TGG - chr1_4:50743845-50743864 Msa0168260:intron 20.0%
!!! TATTAGTTTTAGGGTTATTA+AGG + chr1_4:50744004-50744023 None:intergenic 20.0%
!!! ATGACTGTTCTTTTTTTTTT+TGG + chr1_4:50744664-50744683 None:intergenic 20.0%
!! GCTATATGTAATAGATAAAT+CGG + chr1_4:50744771-50744790 None:intergenic 20.0%
!!! GGATTTAGATAGTTTTGTTT+TGG + chr1_4:50737355-50737374 None:intergenic 25.0%
! TATTATCAAACGTAAAACGT+TGG + chr1_4:50737839-50737858 None:intergenic 25.0%
! AATAGTTAGGGAAAAGAAAA+AGG - chr1_4:50738073-50738092 Msa0168260:intron 25.0%
!!! TAATAAGCTTTATTCTTGCT+GGG - chr1_4:50738189-50738208 Msa0168260:intron 25.0%
! GACATATCATATATATGCTA+TGG - chr1_4:50738469-50738488 Msa0168260:CDS 25.0%
! CATATAGTAACAAACATCAA+AGG + chr1_4:50739094-50739113 None:intergenic 25.0%
!!! TGTTATAAGGTTCTTTTTTG+TGG - chr1_4:50739371-50739390 Msa0168260:intron 25.0%
!!! GTTCTTTTTTGTGGTAAATT+TGG - chr1_4:50739380-50739399 Msa0168260:intron 25.0%
! GACAATTTAGCTATTTGAAT+AGG - chr1_4:50739586-50739605 Msa0168260:intron 25.0%
!! TTGAATAGGATTTACTGATT+TGG - chr1_4:50739600-50739619 Msa0168260:intron 25.0%
! AATATCCGGAATATATATGT+AGG - chr1_4:50740035-50740054 Msa0168260:intron 25.0%
!! AAGATGTTTCAGAATTTTTG+TGG + chr1_4:50740175-50740194 None:intergenic 25.0%
!! TTGTAGGATTATGGATTAAA+GGG + chr1_4:50740337-50740356 None:intergenic 25.0%
! AATATACTCATCTTCACAAA+AGG - chr1_4:50741033-50741052 Msa0168260:intron 25.0%
! TATAAAGGAACTGTGAATTT+AGG + chr1_4:50741228-50741247 None:intergenic 25.0%
! CATAACCTAATGATCATATA+CGG - chr1_4:50741471-50741490 Msa0168260:intron 25.0%
! TTAGAACTAACGATTTCATT+TGG + chr1_4:50741550-50741569 None:intergenic 25.0%
!!! AAATGAAATCGTTAGTTCTA+AGG - chr1_4:50741549-50741568 Msa0168260:intron 25.0%
!!! AATGAAATCGTTAGTTCTAA+GGG - chr1_4:50741550-50741569 Msa0168260:intron 25.0%
!! AATGCTTTTGGACATTTAAT+CGG + chr1_4:50741652-50741671 None:intergenic 25.0%
! TTAAGTTAATACTCTAGACA+TGG + chr1_4:50741712-50741731 None:intergenic 25.0%
!!! GATATTTTAGAGAGGAAATA+GGG + chr1_4:50742043-50742062 None:intergenic 25.0%
!!! AGATATTTTAGAGAGGAAAT+AGG + chr1_4:50742044-50742063 None:intergenic 25.0%
!!! CAGATATAGATATTTTAGAG+AGG + chr1_4:50742051-50742070 None:intergenic 25.0%
!! TATTTTCAAAGAATAGCAAG+TGG - chr1_4:50742113-50742132 Msa0168260:intron 25.0%
!! ATTTTCAAAGAATAGCAAGT+GGG - chr1_4:50742114-50742133 Msa0168260:intron 25.0%
! AAGATAAGTAATGCGTAATA+AGG - chr1_4:50742504-50742523 Msa0168260:intron 25.0%
!! CTCACATATTTAAAACGTAT+TGG + chr1_4:50743112-50743131 None:intergenic 25.0%
!!! CAATACGTTTTAAATATGTG+AGG - chr1_4:50743110-50743129 Msa0168260:intron 25.0%
! GAATAAACTAAGAGAGAAAT+AGG + chr1_4:50743465-50743484 None:intergenic 25.0%
!! CACTATTTCATCTAGAATAA+AGG - chr1_4:50744063-50744082 Msa0168260:intron 25.0%
! TTACAATGTATCTCTCATTA+GGG + chr1_4:50744091-50744110 None:intergenic 25.0%
! ATTACAATGTATCTCTCATT+AGG + chr1_4:50744092-50744111 None:intergenic 25.0%
! TCAACAATTCTTTCTAAATC+TGG + chr1_4:50744266-50744285 None:intergenic 25.0%
! CTATGTTCAATGAACATAAT+GGG + chr1_4:50744603-50744622 None:intergenic 25.0%
! ACTATGTTCAATGAACATAA+TGG + chr1_4:50744604-50744623 None:intergenic 25.0%
!!! CAGTCATTTTTTACTTTTTC+TGG - chr1_4:50744677-50744696 Msa0168260:intron 25.0%
!!! TAATCATTTTTGACTTTGAG+TGG - chr1_4:50744703-50744722 Msa0168260:intron 25.0%
! TAACAAAGAAACCAATGTTT+CGG + chr1_4:50744850-50744869 None:intergenic 25.0%
! TATTATCAAACGTAAAACGT+TGG + chr1_4:50737839-50737858 None:intergenic 25.0%
!! TTTTTCACTTTCCATAGAAA+TGG + chr1_4:50745524-50745543 None:intergenic 25.0%
! GTGAAAAAATTCCTAAACAT+TGG - chr1_4:50745536-50745555 Msa0168260:five_prime_UTR 25.0%
!!! TGTTTTGGCTATGAATAAGA+AGG + chr1_4:50737340-50737359 None:intergenic 30.0%
TATCAGATATCCATTGTATG+CGG + chr1_4:50737461-50737480 None:intergenic 30.0%
! ATTTTCAACGAATTTTCGGA+GGG + chr1_4:50737724-50737743 None:intergenic 30.0%
! CGACATTTTCAACGAATTTT+CGG + chr1_4:50737728-50737747 None:intergenic 30.0%
AATATTTGCATAATCGCGTT+TGG - chr1_4:50737855-50737874 Msa0168260:CDS 30.0%
TTCTTCACTTTCCATAGAAA+TGG + chr1_4:50737984-50738003 None:intergenic 30.0%
!! GTAATAAGCTTTATTCTTGC+TGG - chr1_4:50738188-50738207 Msa0168260:intron 30.0%
TGAGATTCTTAAGGAAGTTA+TGG - chr1_4:50738280-50738299 Msa0168260:intron 30.0%
GAGATTCTTAAGGAAGTTAT+GGG - chr1_4:50738281-50738300 Msa0168260:intron 30.0%
TAAGGAAGTTATGGGAAAAT+CGG - chr1_4:50738289-50738308 Msa0168260:intron 30.0%
GGAAACTGTTAATTACAATG+AGG - chr1_4:50738310-50738329 Msa0168260:intron 30.0%
TGTTAATTACAATGAGGTGA+AGG - chr1_4:50738316-50738335 Msa0168260:intron 30.0%
ATGGTACTTTAGTGAAGAAA+GGG - chr1_4:50738438-50738457 Msa0168260:CDS 30.0%
ATCATATATATGCTATGGGA+AGG - chr1_4:50738474-50738493 Msa0168260:CDS 30.0%
TGAAAAACCGCATAACTATA+AGG + chr1_4:50738596-50738615 None:intergenic 30.0%
! TTATAGTTATGCGGTTTTTC+AGG - chr1_4:50738595-50738614 Msa0168260:intron 30.0%
TAGTAACAAACATCAAAGGT+AGG + chr1_4:50739090-50739109 None:intergenic 30.0%
GCAAATCTAAATCAAATGCT+AGG + chr1_4:50739201-50739220 None:intergenic 30.0%
ATGCCATTCCTAATGTTATA+AGG - chr1_4:50739358-50739377 Msa0168260:intron 30.0%
GAACCTTATAACATTAGGAA+TGG + chr1_4:50739364-50739383 None:intergenic 30.0%
TATAAGACATGGAAATAAGG+TGG - chr1_4:50739520-50739539 Msa0168260:intron 30.0%
!! TAGGATTTACTGATTTGGTT+AGG - chr1_4:50739605-50739624 Msa0168260:intron 30.0%
!!! TGAATGGATTTTGAGATTCA+TGG + chr1_4:50739746-50739765 None:intergenic 30.0%
!! AGAATAAGCTTTAGGAATGA+TGG + chr1_4:50740213-50740232 None:intergenic 30.0%
CAGAAGATAGAATAAGCTTT+AGG + chr1_4:50740221-50740240 None:intergenic 30.0%
ATTCTATCTTCTGTTATGCA+AGG - chr1_4:50740228-50740247 Msa0168260:intron 30.0%
! TGTAGGATTATGGATTAAAG+GGG + chr1_4:50740336-50740355 None:intergenic 30.0%
! CTTGTAGGATTATGGATTAA+AGG + chr1_4:50740338-50740357 None:intergenic 30.0%
GGGCATATTTACTTACTTAA+GGG + chr1_4:50740380-50740399 None:intergenic 30.0%
TGGGCATATTTACTTACTTA+AGG + chr1_4:50740381-50740400 None:intergenic 30.0%
GTAAGTGATGAAAGTAAGAT+GGG + chr1_4:50740400-50740419 None:intergenic 30.0%
AGTAAGTGATGAAAGTAAGA+TGG + chr1_4:50740401-50740420 None:intergenic 30.0%
TCGGTTTACCTTATTACTAT+TGG - chr1_4:50740594-50740613 Msa0168260:intron 30.0%
CCATCATTCCAATAGTAATA+AGG + chr1_4:50740605-50740624 None:intergenic 30.0%
CCTTATTACTATTGGAATGA+TGG - chr1_4:50740602-50740621 Msa0168260:intron 30.0%
ACAAAGTTAGAGGAAATGAT+AGG + chr1_4:50740747-50740766 None:intergenic 30.0%
TCTGAATCAATCTTCAACTT+CGG - chr1_4:50740932-50740951 Msa0168260:intron 30.0%
! TTTGTTTCTTTGTTCTCAGT+AGG - chr1_4:50741192-50741211 Msa0168260:intron 30.0%
ATACTTCATCAGGCATATAA+AGG + chr1_4:50741243-50741262 None:intergenic 30.0%
TGATGCAAAAATACTTCATC+AGG + chr1_4:50741253-50741272 None:intergenic 30.0%
AGAAACCGTATATGATCATT+AGG + chr1_4:50741479-50741498 None:intergenic 30.0%
! TTTTGGACATTTAATCGGTT+GGG + chr1_4:50741647-50741666 None:intergenic 30.0%
!! AATCTAGGACTTAATGCTTT+TGG + chr1_4:50741664-50741683 None:intergenic 30.0%
CAAAGAGATTCAAGATGATT+TGG + chr1_4:50741775-50741794 None:intergenic 30.0%
GGATAAATTCCTGCATAAAA+GGG - chr1_4:50742475-50742494 Msa0168260:intron 30.0%
! GACTTAAAATTTTGAACGGA+AGG + chr1_4:50742700-50742719 None:intergenic 30.0%
!! GTTTTCATTGGTTACAAACA+TGG - chr1_4:50743079-50743098 Msa0168260:intron 30.0%
! AAAACCAAAACCCTGATTTT+CGG + chr1_4:50743339-50743358 None:intergenic 30.0%
!!! GTTTTGGTTTTCTTCAAAAG+TGG - chr1_4:50743348-50743367 Msa0168260:intron 30.0%
! TTTTTGTCCAACAAAGACAA+GGG + chr1_4:50743582-50743601 None:intergenic 30.0%
!!! TTTTTTGTCCAACAAAGACA+AGG + chr1_4:50743583-50743602 None:intergenic 30.0%
TTTCAACATATTCGAACTCA+TGG + chr1_4:50743922-50743941 None:intergenic 30.0%
! ATGCATAGTTTCATTTTGAG+TGG + chr1_4:50744147-50744166 None:intergenic 30.0%
ACGTAAGATACAATTCACTT+TGG + chr1_4:50744815-50744834 None:intergenic 30.0%
ATTGTATCTTACGTACCAAA+TGG - chr1_4:50744821-50744840 Msa0168260:five_prime_UTR 30.0%
!!! TGTTTTGGATCGTTTTTTTG+TGG + chr1_4:50744910-50744929 None:intergenic 30.0%
GGAGAATATCTTGAAAATCA+GGG + chr1_4:50745358-50745377 None:intergenic 30.0%
TGGAGAATATCTTGAAAATC+AGG + chr1_4:50745359-50745378 None:intergenic 30.0%
AATATTTGCATAATCGCGTT+TGG - chr1_4:50737855-50737874 Msa0168260:CDS 30.0%
ACTTGCCACAAAAATTGTTA+GGG - chr1_4:50745601-50745620 Msa0168260:five_prime_UTR 30.0%
! CTTTTCCCTAACAATTTTTG+TGG + chr1_4:50745609-50745628 None:intergenic 30.0%
AAAAGATTCATCTGAATGAC+CGG + chr1_4:50738156-50738175 None:intergenic 30.0%
!! TGATAAGCTTTATTCTTGCT+GGG - chr1_4:50745729-50745748 Msa0168260:five_prime_UTR 30.0%
AATGATAGTTAGTTACGATG+AGG - chr1_4:50745850-50745869 Msa0168260:five_prime_UTR 30.0%
ATGGAACATTAGTGAAGAAA+GGG - chr1_4:50745978-50745997 Msa0168260:five_prime_UTR 30.0%
AATGGATCCTTATACTTATC+CGG - chr1_4:50746126-50746145 Msa0168260:five_prime_UTR 30.0%
TGAAAAACCGGATAAGTATA+AGG + chr1_4:50746136-50746155 None:intergenic 30.0%
CACCTTACTTCAATAATGAA+AGG - chr1_4:50746286-50746305 Msa0168260:five_prime_UTR 30.0%
CACCTTTCATTATTGAAGTA+AGG + chr1_4:50746291-50746310 None:intergenic 30.0%
CTTACTTCAATAATGAAAGG+TGG - chr1_4:50746289-50746308 Msa0168260:five_prime_UTR 30.0%
TTCCATTTGGTACGTAACTT+GGG + chr1_4:50737271-50737290 None:intergenic 35.0%
!! CCAATATTTCGAGTTCCATT+TGG + chr1_4:50737284-50737303 None:intergenic 35.0%
CCAAATGGAACTCGAAATAT+TGG - chr1_4:50737281-50737300 Msa0168260:CDS 35.0%
!! AATAGGATAAGCTTTGGGAA+TGG + chr1_4:50737400-50737419 None:intergenic 35.0%
! TTTAGTGTTGAATTCATGGC+TGG + chr1_4:50737700-50737719 None:intergenic 35.0%
! GGGATTTAGTGTTGAATTCA+TGG + chr1_4:50737704-50737723 None:intergenic 35.0%
! CATTTTCAACGAATTTTCGG+AGG + chr1_4:50737725-50737744 None:intergenic 35.0%
! ATCAAAGGCTTTAACAAACG+CGG + chr1_4:50737919-50737938 None:intergenic 35.0%
! CTTTTCCCTAACTATTCTTG+TGG + chr1_4:50738069-50738088 None:intergenic 35.0%
! AAAATCAGCGTTGGAATCAT+TGG - chr1_4:50738106-50738125 Msa0168260:intron 35.0%
!!! CTATCGCGATTTTTAAGTTC+AGG - chr1_4:50738134-50738153 Msa0168260:intron 35.0%
TGTCGAGAATGAGATTCTTA+AGG - chr1_4:50738271-50738290 Msa0168260:intron 35.0%
TTACAATGAGGTGAAGGATA+TGG - chr1_4:50738322-50738341 Msa0168260:intron 35.0%
! TTCTTCACTAAAGTACCATC+CGG + chr1_4:50738437-50738456 None:intergenic 35.0%
GATGGTACTTTAGTGAAGAA+AGG - chr1_4:50738437-50738456 Msa0168260:CDS 35.0%
!! ATGGAAAGTGGAGCTTTATT+GGG - chr1_4:50738564-50738583 Msa0168260:CDS 35.0%
GATGGATCCTTATAGTTATG+CGG - chr1_4:50738586-50738605 Msa0168260:CDS 35.0%
TGTATAAACTAAGGTGGTGT+AGG - chr1_4:50738827-50738846 Msa0168260:intron 35.0%
AAATGGCCACACACATATAT+AGG + chr1_4:50739027-50739046 None:intergenic 35.0%
CCACAAATGAAAAATCTACC+AGG + chr1_4:50739477-50739496 None:intergenic 35.0%
! CCTGGTAGATTTTTCATTTG+TGG - chr1_4:50739474-50739493 Msa0168260:intron 35.0%
TATATAATGAGCCCTCAAAG+TGG - chr1_4:50739544-50739563 Msa0168260:intron 35.0%
TGGAAAAAAAGATTGTCGCA+TGG - chr1_4:50739785-50739804 Msa0168260:intron 35.0%
GGAAAAAAAGATTGTCGCAT+GGG - chr1_4:50739786-50739805 Msa0168260:intron 35.0%
TTGCGCCTACATATATATTC+CGG + chr1_4:50740043-50740062 None:intergenic 35.0%
TCTTACGTAGCAAATGGAAT+TGG - chr1_4:50740090-50740109 Msa0168260:intron 35.0%
!! ATAAGCTTTAGGAATGATGG+TGG + chr1_4:50740210-50740229 None:intergenic 35.0%
! CTTCTGTTATGCAAGGTATT+AGG - chr1_4:50740235-50740254 Msa0168260:intron 35.0%
! GTAGGATTATGGATTAAAGG+GGG + chr1_4:50740335-50740354 None:intergenic 35.0%
CTCATAAGCTTGTAGGATTA+TGG + chr1_4:50740346-50740365 None:intergenic 35.0%
CTTACTTAAGGGACATGTTA+GGG + chr1_4:50740369-50740388 None:intergenic 35.0%
ACTTACTTAAGGGACATGTT+AGG + chr1_4:50740370-50740389 None:intergenic 35.0%
TAGAGGAAATGATAGGTAGA+AGG + chr1_4:50740740-50740759 None:intergenic 35.0%
ATTTCCTCTAACTTTGTCGA+TGG - chr1_4:50740750-50740769 Msa0168260:intron 35.0%
! TTCCTATTGCCTTTGAGAAA+GGG - chr1_4:50740846-50740865 Msa0168260:intron 35.0%
CAAAAGGATAATGTTGTGAC+TGG - chr1_4:50741049-50741068 Msa0168260:intron 35.0%
AGTGATAGGAGAAACATTTC+TGG + chr1_4:50741126-50741145 None:intergenic 35.0%
GAAACAAAAGCTGAACTGAT+AGG + chr1_4:50741180-50741199 None:intergenic 35.0%
TATTGTGTATCGTCTCCATA+GGG - chr1_4:50741284-50741303 Msa0168260:intron 35.0%
! AATAAGGCGTGAAACTTGTT+AGG - chr1_4:50741421-50741440 Msa0168260:intron 35.0%
TTATGTGTAACGCTTGGTTA+AGG + chr1_4:50741456-50741475 None:intergenic 35.0%
ATTAGGTTATGTGTAACGCT+TGG + chr1_4:50741462-50741481 None:intergenic 35.0%
TAAACAATCACAAAGCCGTT+CGG - chr1_4:50741602-50741621 Msa0168260:intron 35.0%
! CTTTTGGACATTTAATCGGT+TGG + chr1_4:50741648-50741667 None:intergenic 35.0%
GTAGCTAAATCTCCTTTGTT+GGG + chr1_4:50741901-50741920 None:intergenic 35.0%
AGTAGCTAAATCTCCTTTGT+TGG + chr1_4:50741902-50741921 None:intergenic 35.0%
GATTTAGCTACTCATCATCA+TGG - chr1_4:50741910-50741929 Msa0168260:intron 35.0%
AACTTGTGATGTCTCTACAA+AGG - chr1_4:50741973-50741992 Msa0168260:intron 35.0%
GGGATAAATTCCTGCATAAA+AGG - chr1_4:50742474-50742493 Msa0168260:intron 35.0%
CTTGCTTTGCAAGTTATTGA+AGG + chr1_4:50742556-50742575 None:intergenic 35.0%
ATTGGTTACAAACATGGAGT+TGG - chr1_4:50743085-50743104 Msa0168260:intron 35.0%
TAAATATGTGAGGGATACGA+CGG - chr1_4:50743120-50743139 Msa0168260:intron 35.0%
GACAATGCGTAATATATGCA+AGG - chr1_4:50743240-50743259 Msa0168260:intron 35.0%
CTTTCCATATCCGAAAATCA+GGG - chr1_4:50743326-50743345 Msa0168260:intron 35.0%
! AAAACCCTGATTTTCGGATA+TGG + chr1_4:50743333-50743352 None:intergenic 35.0%
! ATATCCGAAAATCAGGGTTT+TGG - chr1_4:50743332-50743351 Msa0168260:intron 35.0%
! TTTTGTCCAACAAAGACAAG+GGG + chr1_4:50743581-50743600 None:intergenic 35.0%
TGGACAAAAAAAAAGTCGCT+AGG - chr1_4:50743592-50743611 Msa0168260:intron 35.0%
GGTTAAGGGTCAAATATAGT+AGG - chr1_4:50744359-50744378 Msa0168260:intron 35.0%
TTCATGACGATCTCTTTACT+TGG + chr1_4:50744743-50744762 None:intergenic 35.0%
GAAACACAGAACCAATGATA+GGG + chr1_4:50744956-50744975 None:intergenic 35.0%
TGTCAGAAATCCATTGTATG+AGG + chr1_4:50745001-50745020 None:intergenic 35.0%
! GGGATTTAGTGTTGAATTCA+TGG + chr1_4:50737704-50737723 None:intergenic 35.0%
!!! TTTGGTTTTTGGAAGCTTCA+TGG + chr1_4:50745328-50745347 None:intergenic 35.0%
GAATATCTTGAAAATCAGGG+AGG + chr1_4:50745355-50745374 None:intergenic 35.0%
GACTTGCCACAAAAATTGTT+AGG - chr1_4:50745600-50745619 Msa0168260:five_prime_UTR 35.0%
AGAAAAGACAACCTTGGAAT+CGG - chr1_4:50745643-50745662 Msa0168260:five_prime_UTR 35.0%
!!! TTGTCGCGATTTTTAAGTTC+CGG - chr1_4:50745674-50745693 Msa0168260:five_prime_UTR 35.0%
!! GTGATAAGCTTTATTCTTGC+TGG - chr1_4:50745728-50745747 Msa0168260:five_prime_UTR 35.0%
TTCTTCACTAATGTTCCATC+TGG + chr1_4:50745977-50745996 None:intergenic 35.0%
GATGGAACATTAGTGAAGAA+AGG - chr1_4:50745977-50745996 Msa0168260:five_prime_UTR 35.0%
TGCGTATCATGTATATGCTA+TGG - chr1_4:50746009-50746028 Msa0168260:five_prime_UTR 35.0%
GCGTATCATGTATATGCTAT+GGG - chr1_4:50746010-50746029 Msa0168260:five_prime_UTR 35.0%
ATCATGTATATGCTATGGGA+AGG - chr1_4:50746014-50746033 Msa0168260:five_prime_UTR 35.0%
!! AAAATGGAGCTTTGTTGGAA+TGG - chr1_4:50746108-50746127 Msa0168260:five_prime_UTR 35.0%
GTTGGTTATTGGCATTATGA+GGG - chr1_4:50746210-50746229 Msa0168260:five_prime_UTR 35.0%
AACCCAAGTTACGTACCAAA+TGG - chr1_4:50737266-50737285 Msa0168260:CDS 40.0%
GTTCCATTTGGTACGTAACT+TGG + chr1_4:50737272-50737291 None:intergenic 40.0%
CCGACAATAGGATAAGCTTT+GGG + chr1_4:50737405-50737424 None:intergenic 40.0%
CCCAAAGCTTATCCTATTGT+CGG - chr1_4:50737402-50737421 Msa0168260:CDS 40.0%
ACCGACAATAGGATAAGCTT+TGG + chr1_4:50737406-50737425 None:intergenic 40.0%
! AGCTTATCCTATTGTCGGTT+CGG - chr1_4:50737407-50737426 Msa0168260:CDS 40.0%
! TTTGTTGTAGCAAGGGAAGT+TGG + chr1_4:50737586-50737605 None:intergenic 40.0%
AACTTCCCTTGCTACAACAA+AGG - chr1_4:50737585-50737604 Msa0168260:CDS 40.0%
! TGAGACCTTTGTTGTAGCAA+GGG + chr1_4:50737593-50737612 None:intergenic 40.0%
TCAGAAGCTTCAGAGAGAAT+AGG + chr1_4:50737780-50737799 None:intergenic 40.0%
TAAATGTTGGATCTGAGCGA+CGG - chr1_4:50738009-50738028 Msa0168260:intron 40.0%
ACTCGCCACAAGAATAGTTA+GGG - chr1_4:50738061-50738080 Msa0168260:intron 40.0%
GCTTGAAGAAAAATCAGCGT+TGG - chr1_4:50738097-50738116 Msa0168260:intron 40.0%
GTACTTTAGTGAAGAAAGGG+TGG - chr1_4:50738441-50738460 Msa0168260:CDS 40.0%
TTTAGTGAAGAAAGGGTGGA+GGG - chr1_4:50738445-50738464 Msa0168260:CDS 40.0%
! GATGGAAAGTGGAGCTTTAT+TGG - chr1_4:50738563-50738582 Msa0168260:CDS 40.0%
!! AAAGTGGAGCTTTATTGGGA+TGG - chr1_4:50738568-50738587 Msa0168260:CDS 40.0%
GGTGTGTTTAGGAAAGGAAA+TGG - chr1_4:50738628-50738647 Msa0168260:CDS 40.0%
TGGTTCCTGCAATGGATAAA+GGG - chr1_4:50738702-50738721 Msa0168260:CDS 40.0%
CACCTTACTTCGGTAATGAA+AGG - chr1_4:50738746-50738765 Msa0168260:CDS 40.0%
CACCTTTCATTACCGAAGTA+AGG + chr1_4:50738751-50738770 None:intergenic 40.0%
CTTACTTCGGTAATGAAAGG+TGG - chr1_4:50738749-50738768 Msa0168260:CDS 40.0%
TACGCTTCTCAATCTTTACC+GGG + chr1_4:50738778-50738797 None:intergenic 40.0%
CTACGCTTCTCAATCTTTAC+CGG + chr1_4:50738779-50738798 None:intergenic 40.0%
! CTGTGCTATGATCTGTTTTC+AGG - chr1_4:50738932-50738951 Msa0168260:intron 40.0%
AGAACTGGTGTATCCAATGT+AGG - chr1_4:50738977-50738996 Msa0168260:intron 40.0%
CCATTCTCAGAAACCTACAT+TGG + chr1_4:50738993-50739012 None:intergenic 40.0%
! CCAATGTAGGTTTCTGAGAA+TGG - chr1_4:50738990-50739009 Msa0168260:intron 40.0%
GTGATGCCTATATATGTGTG+TGG - chr1_4:50739018-50739037 Msa0168260:intron 40.0%
AACTGTCCTAAGTCTAAACC+AGG - chr1_4:50739123-50739142 Msa0168260:intron 40.0%
ACTGTCCTAAGTCTAAACCA+GGG - chr1_4:50739124-50739143 Msa0168260:intron 40.0%
TTTAGAAGTAAGCAAACCCC+TGG + chr1_4:50739144-50739163 None:intergenic 40.0%
TGGTAAATTTGGATGCATCG+AGG - chr1_4:50739391-50739410 Msa0168260:intron 40.0%
GGTAAATTTGGATGCATCGA+GGG - chr1_4:50739392-50739411 Msa0168260:intron 40.0%
ATCGAGGGAAGGTTATCTTT+AGG - chr1_4:50739407-50739426 Msa0168260:intron 40.0%
ATCTACCAGGTCAAGATTCT+CGG + chr1_4:50739464-50739483 None:intergenic 40.0%
! AGTAAAGAGAGCCACTTTGA+GGG + chr1_4:50739558-50739577 None:intergenic 40.0%
! AAGTAAAGAGAGCCACTTTG+AGG + chr1_4:50739559-50739578 None:intergenic 40.0%
TGCTCAAGAGATAGCTGAAA+AGG - chr1_4:50739677-50739696 Msa0168260:intron 40.0%
!!! TTTTTTAAGGGTGTGCCATG+TGG - chr1_4:50739996-50740015 Msa0168260:intron 40.0%
TTCCGGATATTGCCCAATTA+GGG + chr1_4:50740026-50740045 None:intergenic 40.0%
ATTCCGGATATTGCCCAATT+AGG + chr1_4:50740027-50740046 None:intergenic 40.0%
CTACGTAAGATGTTGGACTT+GGG + chr1_4:50740080-50740099 None:intergenic 40.0%
! CCATTTGCTACGTAAGATGT+TGG + chr1_4:50740087-50740106 None:intergenic 40.0%
CCAACATCTTACGTAGCAAA+TGG - chr1_4:50740084-50740103 Msa0168260:intron 40.0%
TTGCTTCTTCCATGTGCAAT+AGG - chr1_4:50740453-50740472 Msa0168260:intron 40.0%
GCAAAGATTCCTATTGCACA+TGG + chr1_4:50740465-50740484 None:intergenic 40.0%
TTAGCGACTCTAAGCTCATA+GGG - chr1_4:50740649-50740668 Msa0168260:intron 40.0%
TTGGAATTCACATGGTTAGC+TGG - chr1_4:50740675-50740694 Msa0168260:intron 40.0%
CATACCATCGACAAAGTTAG+AGG + chr1_4:50740757-50740776 None:intergenic 40.0%
! CTTCCTATTGCCTTTGAGAA+AGG - chr1_4:50740845-50740864 Msa0168260:intron 40.0%
TTCCCTTTCTCAAAGGCAAT+AGG + chr1_4:50740851-50740870 None:intergenic 40.0%
GAATCAATCTTCAACTTCGG+TGG - chr1_4:50740935-50740954 Msa0168260:intron 40.0%
! ATGCTGCTTGTCAATCAGTT+TGG + chr1_4:50741003-50741022 None:intergenic 40.0%
TGTTCTGACTCATATTGGTG+TGG + chr1_4:50741156-50741175 None:intergenic 40.0%
TAGGCTGTTCTGACTCATAT+TGG + chr1_4:50741161-50741180 None:intergenic 40.0%
GTATTGTGTATCGTCTCCAT+AGG - chr1_4:50741283-50741302 Msa0168260:intron 40.0%
! CGTCGATTAGATTATCCGAA+CGG + chr1_4:50741620-50741639 None:intergenic 40.0%
AGTACCTCTAATCCCAACAA+AGG - chr1_4:50741886-50741905 Msa0168260:intron 40.0%
ATCTCCTTTGTTGGGATTAG+AGG + chr1_4:50741893-50741912 None:intergenic 40.0%
TTGTGATGTCTCTACAAAGG+AGG - chr1_4:50741976-50741995 Msa0168260:intron 40.0%
GAGTGAGAGTGATTAGAAGT+TGG + chr1_4:50742008-50742027 None:intergenic 40.0%
CTAAGAAGAACTAAGATCCC+TGG - chr1_4:50742087-50742106 Msa0168260:intron 40.0%
TTCTTCTTTGCTCAGTGTCT+TGG - chr1_4:50742453-50742472 Msa0168260:intron 40.0%
TCTTCTTTGCTCAGTGTCTT+GGG - chr1_4:50742454-50742473 Msa0168260:intron 40.0%
! CTTACTCTACCCTTTTATGC+AGG + chr1_4:50742487-50742506 None:intergenic 40.0%
GGCATTTAACGCTTATCTCT+CGG - chr1_4:50742525-50742544 Msa0168260:intron 40.0%
CTGCAACTAAGAAGATTCTC+AGG + chr1_4:50742636-50742655 None:intergenic 40.0%
GAATCTTCTTAGTTGCAGTG+AGG - chr1_4:50742638-50742657 Msa0168260:intron 40.0%
ACTAGCTAGCGTTCTTTCTT+GGG - chr1_4:50743005-50743024 Msa0168260:intron 40.0%
TGCGTAATATATGCAAGGTC+TGG - chr1_4:50743245-50743264 Msa0168260:intron 40.0%
! CCTGATTTTCGGATATGGAA+AGG + chr1_4:50743328-50743347 None:intergenic 40.0%
CCTTTCCATATCCGAAAATC+AGG - chr1_4:50743325-50743344 Msa0168260:intron 40.0%
AAAAGTGGTCATAGTCCACT+CGG - chr1_4:50743363-50743382 Msa0168260:intron 40.0%
AATACGAAATTTGCCCGTTG+AGG + chr1_4:50743428-50743447 None:intergenic 40.0%
TTTGTCCAACAAAGACAAGG+GGG + chr1_4:50743580-50743599 None:intergenic 40.0%
CCAATGTTTCGGATTCCATT+TGG + chr1_4:50744839-50744858 None:intergenic 40.0%
CCAAATGGAATCCGAAACAT+TGG - chr1_4:50744836-50744855 Msa0168260:five_prime_UTR 40.0%
CAATGATAGGGTATGAGTTG+GGG + chr1_4:50744944-50744963 None:intergenic 40.0%
CCAATGATAGGGTATGAGTT+GGG + chr1_4:50744945-50744964 None:intergenic 40.0%
ACCAATGATAGGGTATGAGT+TGG + chr1_4:50744946-50744965 None:intergenic 40.0%
GGAAACACAGAACCAATGAT+AGG + chr1_4:50744957-50744976 None:intergenic 40.0%
CAGAAATCCATTGTATGAGG+CGG + chr1_4:50744998-50745017 None:intergenic 40.0%
TTTGAGAATGTGTTGCACCA+CGG + chr1_4:50737562-50737581 None:intergenic 40.0%
! TTTGTTGTAGCAAGGGAAGT+TGG + chr1_4:50737586-50737605 None:intergenic 40.0%
AACTTCCCTTGCTACAACAA+AGG - chr1_4:50737585-50737604 Msa0168260:CDS 40.0%
! TAGGACCTTTGTTGTAGCAA+GGG + chr1_4:50745133-50745152 None:intergenic 40.0%
AAGAGGGATCGATGAAATGT+AGG + chr1_4:50745152-50745171 None:intergenic 40.0%
AACGGTATCTTCAACACTGA+CGG - chr1_4:50745185-50745204 Msa0168260:five_prime_UTR 40.0%
TAAATCCCTCCGTAAATTCG+TGG - chr1_4:50745256-50745275 Msa0168260:five_prime_UTR 40.0%
GTTAAGTTCAACATCCACCA+CGG + chr1_4:50745285-50745304 None:intergenic 40.0%
TTGGAAGCTTCATGGAGAAT+AGG + chr1_4:50745320-50745339 None:intergenic 40.0%
!!! AGGGAGGATCATTTGGTTTT+TGG + chr1_4:50745339-50745358 None:intergenic 40.0%
GAAAATCAGGGAGGATCATT+TGG + chr1_4:50745346-50745365 None:intergenic 40.0%
AGCTTTCACAAACGCGATTT+CGG + chr1_4:50745453-50745472 None:intergenic 40.0%
ACGCTGCTATTCCATTTCTA+TGG - chr1_4:50745510-50745529 Msa0168260:five_prime_UTR 40.0%
GCTTGAAGAAAAGACAACCT+TGG - chr1_4:50745637-50745656 Msa0168260:five_prime_UTR 40.0%
!! CAAAATATCCACCGATTCCA+AGG + chr1_4:50745657-50745676 None:intergenic 40.0%
AGTTAGTTACGATGAGGTGA+AGG - chr1_4:50745856-50745875 Msa0168260:five_prime_UTR 40.0%
TTACGATGAGGTGAAGGATA+TGG - chr1_4:50745862-50745881 Msa0168260:five_prime_UTR 40.0%
ATCTGGCAAAACATCATCGT+AGG + chr1_4:50745960-50745979 None:intergenic 40.0%
! TACGATGATGTTTTGCCAGA+TGG - chr1_4:50745959-50745978 Msa0168260:five_prime_UTR 40.0%
GAACATTAGTGAAGAAAGGG+TGG - chr1_4:50745981-50746000 Msa0168260:five_prime_UTR 40.0%
TGGGAAGGTCTGAGAAAATA+TGG - chr1_4:50746029-50746048 Msa0168260:five_prime_UTR 40.0%
GGGAAGGTCTGAGAAAATAT+GGG - chr1_4:50746030-50746049 Msa0168260:five_prime_UTR 40.0%
GGAAGGTCTGAGAAAATATG+GGG - chr1_4:50746031-50746050 Msa0168260:five_prime_UTR 40.0%
AGAAAATATGGGGATCCGAT+TGG - chr1_4:50746041-50746060 Msa0168260:five_prime_UTR 40.0%
GAAAATATGGGGATCCGATT+GGG - chr1_4:50746042-50746061 Msa0168260:five_prime_UTR 40.0%
! GATGGAAAATGGAGCTTTGT+TGG - chr1_4:50746103-50746122 Msa0168260:five_prime_UTR 40.0%
!!! ACTTATCCGGTTTTTCAAGC+TGG - chr1_4:50746139-50746158 Msa0168260:five_prime_UTR 40.0%
!!! CTTATCCGGTTTTTCAAGCT+GGG - chr1_4:50746140-50746159 Msa0168260:five_prime_UTR 40.0%
GGTGTGTTTAGGGAAAGAAA+TGG - chr1_4:50746168-50746187 Msa0168260:five_prime_UTR 40.0%
GTTCTTACAGATGAAGAGGT+TGG - chr1_4:50746192-50746211 Msa0168260:five_prime_UTR 40.0%
! CAGATGAAGAGGTTGGTTAT+TGG - chr1_4:50746199-50746218 Msa0168260:five_prime_UTR 40.0%
! GGTTGGTTATTGGCATTATG+AGG - chr1_4:50746209-50746228 Msa0168260:five_prime_UTR 40.0%
TTGGCATTATGAGGGAGTTT+AGG - chr1_4:50746218-50746237 Msa0168260:five_prime_UTR 40.0%
TGGCATTATGAGGGAGTTTA+GGG - chr1_4:50746219-50746238 Msa0168260:five_prime_UTR 40.0%
GTAAGGTGTGAATCAAACTC+TGG + chr1_4:50746274-50746293 None:intergenic 40.0%
!! AGGATAAGCTTTGGGAATGG+CGG + chr1_4:50737397-50737416 None:intergenic 45.0%
CAGATATCCATTGTATGCGG+CGG + chr1_4:50737458-50737477 None:intergenic 45.0%
! GTGAGACCTTTGTTGTAGCA+AGG + chr1_4:50737594-50737613 None:intergenic 45.0%
GACGGTATCTTCAACACTGA+CGG - chr1_4:50737645-50737664 Msa0168260:CDS 45.0%
GATTTGTCGTTGAACCTTCC+AGG + chr1_4:50737676-50737695 None:intergenic 45.0%
AATCGCGTTTGGATTCGATC+CGG - chr1_4:50737866-50737885 Msa0168260:CDS 45.0%
AGAGAAGGGAGAAGATACTC+CGG + chr1_4:50737888-50737907 None:intergenic 45.0%
GCTTTAACAAACGCGGTTTC+GGG + chr1_4:50737912-50737931 None:intergenic 45.0%
! GGCTTTAACAAACGCGGTTT+CGG + chr1_4:50737913-50737932 None:intergenic 45.0%
GATTCGTGAGCTGTCATCAA+AGG + chr1_4:50737934-50737953 None:intergenic 45.0%
CAGCAGTGAGAGGTTAAATG+CGG - chr1_4:50737953-50737972 Msa0168260:CDS 45.0%
ATGCGGCGATTCCATTTCTA+TGG - chr1_4:50737970-50737989 Msa0168260:CDS 45.0%
GACTCGCCACAAGAATAGTT+AGG - chr1_4:50738060-50738079 Msa0168260:intron 45.0%
TGGGAGAGATACAACTTCAG+CGG - chr1_4:50738208-50738227 Msa0168260:intron 45.0%
CCTCATACTCTCGCATAATG+CGG + chr1_4:50738360-50738379 None:intergenic 45.0%
GAGTATGAGGTTGTATCCTC+CGG - chr1_4:50738370-50738389 Msa0168260:intron 45.0%
! GGCTTATGACGATGTTTTGC+CGG - chr1_4:50738415-50738434 Msa0168260:CDS 45.0%
! TATGACGATGTTTTGCCGGA+TGG - chr1_4:50738419-50738438 Msa0168260:CDS 45.0%
CTTTAGTGAAGAAAGGGTGG+AGG - chr1_4:50738444-50738463 Msa0168260:CDS 45.0%
TGGGAAGGTCCGAGAAAATA+TGG - chr1_4:50738489-50738508 Msa0168260:CDS 45.0%
GGGAAGGTCCGAGAAAATAT+GGG - chr1_4:50738490-50738509 Msa0168260:CDS 45.0%
GGAAGGTCCGAGAAAATATG+GGG - chr1_4:50738491-50738510 Msa0168260:CDS 45.0%
! ATCGGGTCCCCATATTTTCT+CGG + chr1_4:50738501-50738520 None:intergenic 45.0%
AGAAAATATGGGGACCCGAT+TGG - chr1_4:50738501-50738520 Msa0168260:CDS 45.0%
GAAAATATGGGGACCCGATT+GGG - chr1_4:50738502-50738521 Msa0168260:CDS 45.0%
!!! AGTTATGCGGTTTTTCAGGC+TGG - chr1_4:50738599-50738618 Msa0168260:intron 45.0%
!!! GTTATGCGGTTTTTCAGGCT+GGG - chr1_4:50738600-50738619 Msa0168260:intron 45.0%
TCCTTTCCTAAACACACCCT+CGG + chr1_4:50738626-50738645 None:intergenic 45.0%
TGGCATTCTTGCAGATGAAG+AGG - chr1_4:50738648-50738667 Msa0168260:CDS 45.0%
GGCATTCTTGCAGATGAAGA+GGG - chr1_4:50738649-50738668 Msa0168260:CDS 45.0%
AGATGAAGAGGGTTGTTGCA+GGG - chr1_4:50738660-50738679 Msa0168260:CDS 45.0%
AGGGATCATGAGGCAGTTTA+GGG - chr1_4:50738679-50738698 Msa0168260:CDS 45.0%
GTGGTTCCTGCAATGGATAA+AGG - chr1_4:50738701-50738720 Msa0168260:CDS 45.0%
GGTTCCTGCAATGGATAAAG+GGG - chr1_4:50738703-50738722 Msa0168260:CDS 45.0%
TCAACCCCTTTATCCATTGC+AGG + chr1_4:50738710-50738729 None:intergenic 45.0%
CTGTCCTAAGTCTAAACCAG+GGG - chr1_4:50739125-50739144 Msa0168260:intron 45.0%
CAAACCCCTGGTTTAGACTT+AGG + chr1_4:50739132-50739151 None:intergenic 45.0%
ATGGCATCACAAAACACTGC+TGG + chr1_4:50739345-50739364 None:intergenic 45.0%
AATTTGGATGCATCGAGGGA+AGG - chr1_4:50739396-50739415 Msa0168260:intron 45.0%
ATACACCGAGAATCTTGACC+TGG - chr1_4:50739456-50739475 Msa0168260:intron 45.0%
AAAGATTGTCGCATGGGAGA+AGG - chr1_4:50739792-50739811 Msa0168260:intron 45.0%
!! AAAAGTTGATGGTGGGTGGT+GGG - chr1_4:50739884-50739903 Msa0168260:intron 45.0%
CACCCTAATTGGGCAATATC+CGG - chr1_4:50740021-50740040 Msa0168260:intron 45.0%
GCTACGTAAGATGTTGGACT+TGG + chr1_4:50740081-50740100 None:intergenic 45.0%
!! TTTAGGAATGATGGTGGTGG+TGG + chr1_4:50740204-50740223 None:intergenic 45.0%
!! AGCTTTAGGAATGATGGTGG+TGG + chr1_4:50740207-50740226 None:intergenic 45.0%
GTTAGGGCTCATAAGCTTGT+AGG + chr1_4:50740353-50740372 None:intergenic 45.0%
TCGAAGCAGTGGAGAAGAAA+AGG - chr1_4:50740548-50740567 Msa0168260:intron 45.0%
CAGTGGAGAAGAAAAGGACT+CGG - chr1_4:50740554-50740573 Msa0168260:intron 45.0%
GACTCGGCTTAACTTCACTT+GGG - chr1_4:50740570-50740589 Msa0168260:intron 45.0%
GGCTTAACTTCACTTGGGTT+CGG - chr1_4:50740575-50740594 Msa0168260:intron 45.0%
TTAGAGTCGCTAACGCAAAG+AGG + chr1_4:50740642-50740661 None:intergenic 45.0%
GTTAGCGACTCTAAGCTCAT+AGG - chr1_4:50740648-50740667 Msa0168260:intron 45.0%
TAGGGAGCTTGGAATTCACA+TGG - chr1_4:50740667-50740686 Msa0168260:intron 45.0%
! TTCACATGGTTAGCTGGAGA+AGG - chr1_4:50740681-50740700 Msa0168260:intron 45.0%
! TCACATGGTTAGCTGGAGAA+GGG - chr1_4:50740682-50740701 Msa0168260:intron 45.0%
AGGAGAAATACTGCCATCTC+AGG + chr1_4:50740780-50740799 None:intergenic 45.0%
GAGATGGCAGTATTTCTCCT+TGG - chr1_4:50740780-50740799 Msa0168260:intron 45.0%
TCCTTCGTTCCCTTTCTCAA+AGG + chr1_4:50740858-50740877 None:intergenic 45.0%
CTGGTTGCTTCTTAGAGCAT+AGG - chr1_4:50741068-50741087 Msa0168260:intron 45.0%
GGTGTGGAGATAGAAGTGAT+AGG + chr1_4:50741140-50741159 None:intergenic 45.0%
GAGAGTTCATTAACTCGCAG+TGG + chr1_4:50742269-50742288 None:intergenic 45.0%
AAATCGCAGAAGCTGGAACA+GGG + chr1_4:50742415-50742434 None:intergenic 45.0%
AAAATCGCAGAAGCTGGAAC+AGG + chr1_4:50742416-50742435 None:intergenic 45.0%
AAGTGCAAAATCGCAGAAGC+TGG + chr1_4:50742422-50742441 None:intergenic 45.0%
CACTAGCTAGCGTTCTTTCT+TGG - chr1_4:50743004-50743023 Msa0168260:intron 45.0%
CTAGCTAGCGTTCTTTCTTG+GGG - chr1_4:50743006-50743025 Msa0168260:intron 45.0%
TAGCTAGCGTTCTTTCTTGG+GGG - chr1_4:50743007-50743026 Msa0168260:intron 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr1_4:50743218-50743237 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr1_4:50743218-50743237 Msa0168260:intron 45.0%
ACAACCAGCGAGTATTTCGA+CGG + chr1_4:50743396-50743415 None:intergenic 45.0%
GTTGTCTTCTTCCTCCTCAA+CGG - chr1_4:50743411-50743430 Msa0168260:intron 45.0%
TTGTCTTCTTCCTCCTCAAC+GGG - chr1_4:50743412-50743431 Msa0168260:intron 45.0%
TTGTCCAACAAAGACAAGGG+GGG + chr1_4:50743579-50743598 None:intergenic 45.0%
CTAGTATAGCGACAACCACA+CGG - chr1_4:50744185-50744204 Msa0168260:intron 45.0%
GCAATGTTGTCATATCCGTG+TGG + chr1_4:50744203-50744222 None:intergenic 45.0%
AAAATGTTAACCAGTGCCCC+CGG - chr1_4:50744330-50744349 Msa0168260:intron 45.0%
! TATGAGTTGGGGATTGTGGA+GGG + chr1_4:50744933-50744952 None:intergenic 45.0%
CCCAACTCATACCCTATCAT+TGG - chr1_4:50744942-50744961 Msa0168260:five_prime_UTR 45.0%
AAATCCATTGTATGAGGCGG+TGG + chr1_4:50744995-50745014 None:intergenic 45.0%
! GTAGGACCTTTGTTGTAGCA+AGG + chr1_4:50745134-50745153 None:intergenic 45.0%
GTTACCGAGAAACTCGAAGA+GGG + chr1_4:50745168-50745187 None:intergenic 45.0%
! CTCTTCGAGTTTCTCGGTAA+CGG - chr1_4:50745167-50745186 Msa0168260:five_prime_UTR 45.0%
TCAACACTGACGGTGAAAGT+TGG - chr1_4:50745195-50745214 Msa0168260:five_prime_UTR 45.0%
GGTTTCCACGAATTTACGGA+GGG + chr1_4:50745264-50745283 None:intergenic 45.0%
CCACGGTTTCCACGAATTTA+CGG + chr1_4:50745268-50745287 None:intergenic 45.0%
TAAATTCGTGGAAACCGTGG+TGG - chr1_4:50745268-50745287 Msa0168260:five_prime_UTR 45.0%
AATCGCGTTTGGATTCGATC+CGG - chr1_4:50737866-50737885 Msa0168260:CDS 45.0%
GCTTTCACAAACGCGATTTC+GGG + chr1_4:50745452-50745471 None:intergenic 45.0%
TAAACATTGGAACCGAGCGA+CGG - chr1_4:50745549-50745568 Msa0168260:five_prime_UTR 45.0%
AAGTCCTCTTACTTCAGCGA+CGG + chr1_4:50745585-50745604 None:intergenic 45.0%
AAAGACAACCTTGGAATCGG+TGG - chr1_4:50745646-50745665 Msa0168260:five_prime_UTR 45.0%
GAGATTGTATCCTCCAGTTC+CGG - chr1_4:50745916-50745935 Msa0168260:five_prime_UTR 45.0%
TCTTTCCCTAAACACACCCT+CGG + chr1_4:50746166-50746185 None:intergenic 45.0%
TGGCGTTCTTACAGATGAAG+AGG - chr1_4:50746188-50746207 Msa0168260:five_prime_UTR 45.0%
ATGCGCTTCTCGATCTTTAC+TGG + chr1_4:50746319-50746338 None:intergenic 45.0%
!!! TATTTTTTATTAAAGTATAT+CGG - chr1_4:50743667-50743686 Msa0168260:intron 5.0%
!!! TGTTATATATTTTTTTTAAA+GGG + chr1_4:50744501-50744520 None:intergenic 5.0%
!!! ATGTTATATATTTTTTTTAA+AGG + chr1_4:50744502-50744521 None:intergenic 5.0%
!! ATAAGCTTTGGGAATGGCGG+TGG + chr1_4:50737394-50737413 None:intergenic 50.0%
GCAAAAGCCGAACCGACAAT+AGG + chr1_4:50737417-50737436 None:intergenic 50.0%
ATATCCATTGTATGCGGCGG+TGG + chr1_4:50737455-50737474 None:intergenic 50.0%
GAATGTGTTGCACCACAGCA+GGG + chr1_4:50737557-50737576 None:intergenic 50.0%
AGAATGTGTTGCACCACAGC+AGG + chr1_4:50737558-50737577 None:intergenic 50.0%
CAAACCCTCGTCGAGTTTCT+CGG - chr1_4:50737621-50737640 Msa0168260:CDS 50.0%
TCAACACTGACGGTGAAACC+TGG - chr1_4:50737655-50737674 Msa0168260:CDS 50.0%
ACTCTCGCATAATGCGGCAT+GGG + chr1_4:50738354-50738373 None:intergenic 50.0%
TACTCTCGCATAATGCGGCA+TGG + chr1_4:50738355-50738374 None:intergenic 50.0%
! CCGCATTATGCGAGAGTATG+AGG - chr1_4:50738357-50738376 Msa0168260:intron 50.0%
AGGTCGAAACTCAGCCCAAT+CGG + chr1_4:50738519-50738538 None:intergenic 50.0%
CTGAGTTTCGACCTGAGAGA+TGG - chr1_4:50738525-50738544 Msa0168260:CDS 50.0%
TGGTTGAGTCGAGCTGATGA+TGG - chr1_4:50738545-50738564 Msa0168260:CDS 50.0%
!! GTCGAGCTGATGATGGAAAG+TGG - chr1_4:50738552-50738571 Msa0168260:CDS 50.0%
CAGATGAAGAGGGTTGTTGC+AGG - chr1_4:50738659-50738678 Msa0168260:CDS 50.0%
CAGGGATCATGAGGCAGTTT+AGG - chr1_4:50738678-50738697 Msa0168260:CDS 50.0%
GATCATGAGGCAGTTTAGGG+TGG - chr1_4:50738682-50738701 Msa0168260:CDS 50.0%
! GTTTAGGGTGGTTCCTGCAA+TGG - chr1_4:50738694-50738713 Msa0168260:CDS 50.0%
GTTCGCTGCACACCTTACTT+CGG - chr1_4:50738736-50738755 Msa0168260:CDS 50.0%
GGTAATGAAAGGTGGCTTCC+CGG - chr1_4:50738757-50738776 Msa0168260:intron 50.0%
TGGGAGAAGGAGAAGAGGAA+CGG - chr1_4:50739805-50739824 Msa0168260:intron 50.0%
!! TGGCGGAGAAAAGTTGATGG+TGG - chr1_4:50739876-50739895 Msa0168260:intron 50.0%
!! GGCGGAGAAAAGTTGATGGT+GGG - chr1_4:50739877-50739896 Msa0168260:intron 50.0%
!! GGAGAAAAGTTGATGGTGGG+TGG - chr1_4:50739880-50739899 Msa0168260:intron 50.0%
!! GAAAAGTTGATGGTGGGTGG+TGG - chr1_4:50739883-50739902 Msa0168260:intron 50.0%
CCATGTGGCACACCCTAATT+GGG - chr1_4:50740011-50740030 Msa0168260:intron 50.0%
GGACTCGGCTTAACTTCACT+TGG - chr1_4:50740569-50740588 Msa0168260:intron 50.0%
CTCTAAGCTCATAGGGAGCT+TGG - chr1_4:50740656-50740675 Msa0168260:intron 50.0%
TGTCGATGGTATGCCTGAGA+TGG - chr1_4:50740764-50740783 Msa0168260:intron 50.0%
GGAATCTCGAGTACAAGCCA+AGG + chr1_4:50740800-50740819 None:intergenic 50.0%
! GCCTTTGAGAAAGGGAACGA+AGG - chr1_4:50740854-50740873 Msa0168260:intron 50.0%
TGATATCGCGCTAGTCCCTA+TGG + chr1_4:50741302-50741321 None:intergenic 50.0%
GTGACGTGGCAACATCTTAG+TGG + chr1_4:50742218-50742237 None:intergenic 50.0%
TAACTCGCAGTGGCGAGTTA+GGG + chr1_4:50742259-50742278 None:intergenic 50.0%
TTAACTCGCAGTGGCGAGTT+AGG + chr1_4:50742260-50742279 None:intergenic 50.0%
GAGTTGAGTGCGAGCAATGA+TGG - chr1_4:50742325-50742344 Msa0168260:intron 50.0%
GAAAGAACGCTAGCTAGTGC+AGG + chr1_4:50743003-50743022 None:intergenic 50.0%
AGCTAGCGTTCTTTCTTGGG+GGG - chr1_4:50743008-50743027 Msa0168260:intron 50.0%
!! GGGGGTGTCTGTTTGATCAT+CGG - chr1_4:50743044-50743063 Msa0168260:intron 50.0%
! GGGGTGTCTGTTTGATCATC+GGG - chr1_4:50743045-50743064 Msa0168260:intron 50.0%
! GCTCGCAAGCGTGTTTTCAT+TGG - chr1_4:50743067-50743086 Msa0168260:intron 50.0%
ATATGTGAGGGATACGACGG+TGG - chr1_4:50743123-50743142 Msa0168260:intron 50.0%
TATGTGAGGGATACGACGGT+GGG - chr1_4:50743124-50743143 Msa0168260:intron 50.0%
ACGGTGGGAACTAATATGCG+TGG - chr1_4:50743139-50743158 Msa0168260:intron 50.0%
CGGTGGGAACTAATATGCGT+GGG - chr1_4:50743140-50743159 Msa0168260:intron 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + chr1_4:50743217-50743236 None:intergenic 50.0%
ACGAAATTTGCCCGTTGAGG+AGG + chr1_4:50743425-50743444 None:intergenic 50.0%
TCATCCCCCCTTGTCTTTGT+TGG - chr1_4:50743572-50743591 Msa0168260:intron 50.0%
CTGGATTCGTCATCGGTGAT+GGG + chr1_4:50744228-50744247 None:intergenic 50.0%
CTGGTTATTGTTCCCAACGC+TGG + chr1_4:50744247-50744266 None:intergenic 50.0%
AAATGTTAACCAGTGCCCCC+GGG - chr1_4:50744331-50744350 Msa0168260:intron 50.0%
! GTATGAGTTGGGGATTGTGG+AGG + chr1_4:50744934-50744953 None:intergenic 50.0%
! AGGGTATGAGTTGGGGATTG+TGG + chr1_4:50744937-50744956 None:intergenic 50.0%
TTGTATGAGGCGGTGGAAGT+TGG + chr1_4:50744988-50745007 None:intergenic 50.0%
ACTTCCACCGCCTCATACAA+TGG - chr1_4:50744988-50745007 Msa0168260:five_prime_UTR 50.0%
AGGTGGAGGAAGGGATAGTT+TGG + chr1_4:50745028-50745047 None:intergenic 50.0%
! CGATCCCTCTTCGAGTTTCT+CGG - chr1_4:50745161-50745180 Msa0168260:five_prime_UTR 50.0%
CGTTACCGAGAAACTCGAAG+AGG + chr1_4:50745169-50745188 None:intergenic 50.0%
CACTGACGGTGAAAGTTGGA+AGG - chr1_4:50745199-50745218 Msa0168260:five_prime_UTR 50.0%
CGGTTTCCACGAATTTACGG+AGG + chr1_4:50745265-50745284 None:intergenic 50.0%
CCGTAAATTCGTGGAAACCG+TGG - chr1_4:50745265-50745284 Msa0168260:five_prime_UTR 50.0%
AGAGAAGGGAGGAGATACTC+CGG + chr1_4:50745428-50745447 None:intergenic 50.0%
ACGCGATTTCGGGAAGAGAA+GGG + chr1_4:50745442-50745461 None:intergenic 50.0%
AACGCGATTTCGGGAAGAGA+AGG + chr1_4:50745443-50745462 None:intergenic 50.0%
GTCGCTCGGTTCCAATGTTT+AGG + chr1_4:50745550-50745569 None:intergenic 50.0%
! CTGCACTCACGTGGTTCTTT+TGG - chr1_4:50745768-50745787 Msa0168260:five_prime_UTR 50.0%
ATTGTATCCTCCAGTTCCGG+TGG - chr1_4:50745919-50745938 Msa0168260:five_prime_UTR 50.0%
ATCATCGTAGGCTGCTTCCT+TGG + chr1_4:50745948-50745967 None:intergenic 50.0%
AGGTCGAAACTCAGCCCAAT+CGG + chr1_4:50738519-50738538 None:intergenic 50.0%
GTCGAGCTGACGATGGAAAA+TGG - chr1_4:50746092-50746111 Msa0168260:five_prime_UTR 50.0%
TGCTTCCAGCGATGGATGAA+GGG - chr1_4:50746242-50746261 Msa0168260:five_prime_UTR 50.0%
!!! GGTGGAGGAGGGTGTTTTTG+GGG + chr1_4:50737376-50737395 None:intergenic 55.0%
!!! CGGTGGAGGAGGGTGTTTTT+GGG + chr1_4:50737377-50737396 None:intergenic 55.0%
TTGTATGCGGCGGTGGAAGT+TGG + chr1_4:50737448-50737467 None:intergenic 55.0%
ACTTCCACCGCCGCATACAA+TGG - chr1_4:50737448-50737467 Msa0168260:CDS 55.0%
TGGAGGAAGGGACAGTTTGG+AGG + chr1_4:50737485-50737504 None:intergenic 55.0%
AGGTGGAGGAAGGGACAGTT+TGG + chr1_4:50737488-50737507 None:intergenic 55.0%
GGAGGATGAAGGTGGAGGAA+GGG + chr1_4:50737497-50737516 None:intergenic 55.0%
TGGAGGATGAAGGTGGAGGA+AGG + chr1_4:50737498-50737517 None:intergenic 55.0%
GTTTGCCGTGAAGACTTGGC+GGG + chr1_4:50737535-50737554 None:intergenic 55.0%
GGTTTGCCGTGAAGACTTGG+CGG + chr1_4:50737536-50737555 None:intergenic 55.0%
CAGGGTTTGCCGTGAAGACT+TGG + chr1_4:50737539-50737558 None:intergenic 55.0%
CGAGAAACTCGACGAGGGTT+TGG + chr1_4:50737623-50737642 None:intergenic 55.0%
CACTGACGGTGAAACCTGGA+AGG - chr1_4:50737659-50737678 Msa0168260:CDS 55.0%
ACGCGGTTTCGGGAAGAGAA+GGG + chr1_4:50737902-50737921 None:intergenic 55.0%
AACGCGGTTTCGGGAAGAGA+AGG + chr1_4:50737903-50737922 None:intergenic 55.0%
GCTCACGAATCAGCAGTGAG+AGG - chr1_4:50737943-50737962 Msa0168260:CDS 55.0%
GAGTCCTCTTACGTCAGCGA+CGG + chr1_4:50738045-50738064 None:intergenic 55.0%
! CGGCACTCACGTGGTTCTTT+TGG - chr1_4:50738228-50738247 Msa0168260:intron 55.0%
TCCTTACCATCCACGGGAAC+CGG + chr1_4:50738392-50738411 None:intergenic 55.0%
TCCCGTGGATGGTAAGGAAG+CGG - chr1_4:50738394-50738413 Msa0168260:CDS 55.0%
AGCCGCTTCCTTACCATCCA+CGG + chr1_4:50738399-50738418 None:intergenic 55.0%
GGTCGAAACTCAGCCCAATC+GGG + chr1_4:50738518-50738537 None:intergenic 55.0%
GCTCGACTCAACCATCTCTC+AGG + chr1_4:50738539-50738558 None:intergenic 55.0%
! GCCGAGGGTGTGTTTAGGAA+AGG - chr1_4:50738622-50738641 Msa0168260:intron 55.0%
GGGTTGTTGCAGGGATCATG+AGG - chr1_4:50738669-50738688 Msa0168260:CDS 55.0%
GTAAGGTGTGCAGCGAACTC+TGG + chr1_4:50738734-50738753 None:intergenic 55.0%
TCGCATGGGAGAAGGAGAAG+AGG - chr1_4:50739800-50739819 Msa0168260:intron 55.0%
GAGAAGGAGAAGAGGAACGG+TGG - chr1_4:50739808-50739827 Msa0168260:intron 55.0%
AGAAGAGGAACGGTGGTCGA+TGG - chr1_4:50739815-50739834 Msa0168260:intron 55.0%
!! GGGTGGCGGAGAAAAGTTGA+TGG - chr1_4:50739873-50739892 Msa0168260:intron 55.0%
GGTCCACAACTGATGTCGCA+GGG - chr1_4:50739905-50739924 Msa0168260:intron 55.0%
GTCCACAACTGATGTCGCAG+GGG - chr1_4:50739906-50739925 Msa0168260:intron 55.0%
GCCATGTGGCACACCCTAAT+TGG - chr1_4:50740010-50740029 Msa0168260:intron 55.0%
CCCAATTAGGGTGTGCCACA+TGG + chr1_4:50740014-50740033 None:intergenic 55.0%
!! AGGAATGATGGTGGTGGTGG+TGG + chr1_4:50740201-50740220 None:intergenic 55.0%
ACACGTGGGGTTCACTGGAA+GGG + chr1_4:50740516-50740535 None:intergenic 55.0%
CTTCTCCACTGCTTCGAAGC+CGG + chr1_4:50740545-50740564 None:intergenic 55.0%
AGATGTTGCCACGTCACCTC+TGG - chr1_4:50742221-50742240 Msa0168260:intron 55.0%
GATGTTGCCACGTCACCTCT+GGG - chr1_4:50742222-50742241 Msa0168260:intron 55.0%
ATGTTGCCACGTCACCTCTG+GGG - chr1_4:50742223-50742242 Msa0168260:intron 55.0%
TGCTCGCACTCAACTCGCAA+TGG + chr1_4:50742321-50742340 None:intergenic 55.0%
TGATGCTCGCCATTGCGAGT+TGG - chr1_4:50742371-50742390 Msa0168260:intron 55.0%
CACTCGCATCCAACTCGCAA+TGG + chr1_4:50742383-50742402 None:intergenic 55.0%
TAGCGTTCTTTCTTGGGGGG+TGG - chr1_4:50743011-50743030 Msa0168260:intron 55.0%
AGCGTTCTTTCTTGGGGGGT+GGG - chr1_4:50743012-50743031 Msa0168260:intron 55.0%
TTCTTTCTTGGGGGGTGGGT+GGG - chr1_4:50743016-50743035 Msa0168260:intron 55.0%
CCAACTGAGCTAAGCTCACG+GGG + chr1_4:50743216-50743235 None:intergenic 55.0%
GGTGAAACGCGTAGTTCGTG+TGG + chr1_4:50743307-50743326 None:intergenic 55.0%
ACCAGCGAGTATTTCGACGG+CGG + chr1_4:50743393-50743412 None:intergenic 55.0%
GCTGGATTCGTCATCGGTGA+TGG + chr1_4:50744229-50744248 None:intergenic 55.0%
ACCGATGACGAATCCAGCGT+TGG - chr1_4:50744231-50744250 Msa0168260:intron 55.0%
CCCAACGCTGGATTCGTCAT+CGG + chr1_4:50744235-50744254 None:intergenic 55.0%
CCGATGACGAATCCAGCGTT+GGG - chr1_4:50744232-50744251 Msa0168260:intron 55.0%
AATGTTAACCAGTGCCCCCG+GGG - chr1_4:50744332-50744351 Msa0168260:intron 55.0%
TTGACCCTTAACCAGTGCCC+CGG + chr1_4:50744352-50744371 None:intergenic 55.0%
TCTTGTTAACCAGTGCCCCG+GGG + chr1_4:50744478-50744497 None:intergenic 55.0%
! GTCTTGTTAACCAGTGCCCC+GGG + chr1_4:50744479-50744498 None:intergenic 55.0%
!! GGTCTTGTTAACCAGTGCCC+CGG + chr1_4:50744480-50744499 None:intergenic 55.0%
!!! GGGGATTGTGGAGGGTGTTT+TGG + chr1_4:50744925-50744944 None:intergenic 55.0%
CGGTGGAAGTTGGCTGCAAT+GGG + chr1_4:50744978-50744997 None:intergenic 55.0%
GGAGGACAAAGGTGGAGGAA+GGG + chr1_4:50745037-50745056 None:intergenic 55.0%
TGGAGGACAAAGGTGGAGGA+AGG + chr1_4:50745038-50745057 None:intergenic 55.0%
ATGACTGAGCAGGAGCCGAA+GGG + chr1_4:50745065-50745084 None:intergenic 55.0%
GTTTGCCGTGATGACTGAGC+AGG + chr1_4:50745075-50745094 None:intergenic 55.0%
GAATGTGTTGCACCACGGCA+GGG + chr1_4:50745097-50745116 None:intergenic 55.0%
AGAATGTGTTGCACCACGGC+AGG + chr1_4:50745098-50745117 None:intergenic 55.0%
CGATTTCGGGAAGAGAAGGG+AGG + chr1_4:50745439-50745458 None:intergenic 55.0%
GGCTTCTTTCAACCGTCGCT+CGG + chr1_4:50745564-50745583 None:intergenic 55.0%
GAAGCCGTCGCTGAAGTAAG+AGG - chr1_4:50745578-50745597 Msa0168260:five_prime_UTR 55.0%
CAACTTCAGCTGCACTCACG+TGG - chr1_4:50745759-50745778 Msa0168260:five_prime_UTR 55.0%
CTGAGTTTCGACCTGAGAGG+TGG - chr1_4:50746065-50746084 Msa0168260:five_prime_UTR 55.0%
TGGTTGAGTCGAGCTGACGA+TGG - chr1_4:50746085-50746104 Msa0168260:five_prime_UTR 55.0%
CTCGGCCCAGCTTGAAAAAC+CGG + chr1_4:50746148-50746167 None:intergenic 55.0%
!!! GGTTTTTCAAGCTGGGCCGA+GGG - chr1_4:50746147-50746166 Msa0168260:five_prime_UTR 55.0%
! GTTTAGGGTGCTTCCAGCGA+TGG - chr1_4:50746234-50746253 Msa0168260:five_prime_UTR 55.0%
GTGCTTCCAGCGATGGATGA+AGG - chr1_4:50746241-50746260 Msa0168260:five_prime_UTR 55.0%
GCTTCCAGCGATGGATGAAG+GGG - chr1_4:50746243-50746262 Msa0168260:five_prime_UTR 55.0%
TCAACCCCTTCATCCATCGC+TGG + chr1_4:50746250-50746269 None:intergenic 55.0%
!!! GCGGTGGAGGAGGGTGTTTT+TGG + chr1_4:50737378-50737397 None:intergenic 60.0%
TTGGGAATGGCGGTGGAGGA+GGG + chr1_4:50737387-50737406 None:intergenic 60.0%
TTTGGGAATGGCGGTGGAGG+AGG + chr1_4:50737388-50737407 None:intergenic 60.0%
!! AGCTTTGGGAATGGCGGTGG+AGG + chr1_4:50737391-50737410 None:intergenic 60.0%
TATGCGGCGGTGGAAGTTGG+CGG + chr1_4:50737445-50737464 None:intergenic 60.0%
TTCATCCTCCACCGCGCCTT+CGG - chr1_4:50737507-50737526 Msa0168260:CDS 60.0%
CTTCACGGCAAACCCTGCTG+TGG - chr1_4:50737542-50737561 Msa0168260:CDS 60.0%
GTCGCCGAGAAACTCGACGA+GGG + chr1_4:50737628-50737647 None:intergenic 60.0%
CTCGTCGAGTTTCTCGGCGA+CGG - chr1_4:50737627-50737646 Msa0168260:CDS 60.0%
GAAGCCGTCGCTGACGTAAG+AGG - chr1_4:50738038-50738057 Msa0168260:intron 60.0%
CAACTTCAGCGGCACTCACG+TGG - chr1_4:50738219-50738238 Msa0168260:intron 60.0%
GTTGTATCCTCCGGTTCCCG+TGG - chr1_4:50738379-50738398 Msa0168260:intron 60.0%
TATCCTCCGGTTCCCGTGGA+TGG - chr1_4:50738383-50738402 Msa0168260:intron 60.0%
TTACCATCCACGGGAACCGG+AGG + chr1_4:50738389-50738408 None:intergenic 60.0%
TCCGGTTCCCGTGGATGGTA+AGG - chr1_4:50738388-50738407 Msa0168260:CDS 60.0%
GCCGCTTCCTTACCATCCAC+GGG + chr1_4:50738398-50738417 None:intergenic 60.0%
!!! GGTTTTTCAGGCTGGGCCGA+GGG - chr1_4:50738607-50738626 Msa0168260:intron 60.0%
AGAGGAACGGTGGTCGATGG+CGG - chr1_4:50739818-50739837 Msa0168260:intron 60.0%
GGGTCCACAACTGATGTCGC+AGG - chr1_4:50739904-50739923 Msa0168260:intron 60.0%
CTCCCCTGCGACATCAGTTG+TGG + chr1_4:50739911-50739930 None:intergenic 60.0%
CACAACTGATGTCGCAGGGG+AGG - chr1_4:50739909-50739928 Msa0168260:intron 60.0%
GACACGTGGGGTTCACTGGA+AGG + chr1_4:50740517-50740536 None:intergenic 60.0%
GTTACTCGCGAGGCGAGTTC+AGG + chr1_4:50742163-50742182 None:intergenic 60.0%
TGCGAGTGCAGTTACTCGCG+AGG + chr1_4:50742173-50742192 None:intergenic 60.0%
TGTTGCCACGTCACCTCTGG+GGG - chr1_4:50742224-50742243 Msa0168260:intron 60.0%
GTTCTTTCTTGGGGGGTGGG+TGG - chr1_4:50743015-50743034 Msa0168260:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - chr1_4:50743213-50743232 Msa0168260:intron 60.0%
ACCGCCGTCGAAATACTCGC+TGG - chr1_4:50743389-50743408 Msa0168260:intron 60.0%
TGACCCTTAACCAGTGCCCC+GGG + chr1_4:50744351-50744370 None:intergenic 60.0%
GGCTTCCTTAACCAGTGCCC+CGG - chr1_4:50744458-50744477 Msa0168260:intron 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr1_4:50744459-50744478 Msa0168260:intron 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr1_4:50744460-50744479 Msa0168260:intron 60.0%
GCGGTGGAAGTTGGCTGCAA+TGG + chr1_4:50744979-50744998 None:intergenic 60.0%
TTTGTCCTCCACCGCCCCTT+CGG - chr1_4:50745047-50745066 Msa0168260:five_prime_UTR 60.0%
TGACTGAGCAGGAGCCGAAG+GGG + chr1_4:50745064-50745083 None:intergenic 60.0%
GATGACTGAGCAGGAGCCGA+AGG + chr1_4:50745066-50745085 None:intergenic 60.0%
CGGCTCCTGCTCAGTCATCA+CGG - chr1_4:50745067-50745086 Msa0168260:five_prime_UTR 60.0%
GCACACGAATCAGCAGCGAG+AGG - chr1_4:50745483-50745502 Msa0168260:five_prime_UTR 60.0%
TTGGCATCCACCGGAACTGG+AGG + chr1_4:50745929-50745948 None:intergenic 60.0%
TCCAGTTCCGGTGGATGCCA+AGG - chr1_4:50745928-50745947 Msa0168260:five_prime_UTR 60.0%
TCCTTGGCATCCACCGGAAC+TGG + chr1_4:50745932-50745951 None:intergenic 60.0%
GCTGCTTCCTTGGCATCCAC+CGG + chr1_4:50745938-50745957 None:intergenic 60.0%
GGGCTGAGTTTCGACCTGAG+AGG - chr1_4:50738522-50738541 Msa0168260:CDS 60.0%
GCTCGACTCAACCACCTCTC+AGG + chr1_4:50746079-50746098 None:intergenic 60.0%
!!! CGGTTTTTCAAGCTGGGCCG+AGG - chr1_4:50746146-50746165 Msa0168260:five_prime_UTR 60.0%
! CTGGGCCGAGGGTGTGTTTA+GGG - chr1_4:50738618-50738637 Msa0168260:intron 60.0%
GCGGTGGAGGATGAAGGTGG+AGG + chr1_4:50737502-50737521 None:intergenic 65.0%
! GAAGGCGCGGTGGAGGATGA+AGG + chr1_4:50737508-50737527 None:intergenic 65.0%
GAAGACTTGGCGGGAGCCGA+AGG + chr1_4:50737526-50737545 None:intergenic 65.0%
CGGCTCCCGCCAAGTCTTCA+CGG - chr1_4:50737527-50737546 Msa0168260:CDS 65.0%
CGTCGCCGAGAAACTCGACG+AGG + chr1_4:50737629-50737648 None:intergenic 65.0%
!!! CGGTTTTTCAGGCTGGGCCG+AGG - chr1_4:50738606-50738625 Msa0168260:intron 65.0%
! GCTGGGCCGAGGGTGTGTTT+AGG - chr1_4:50738617-50738636 Msa0168260:intron 65.0%
!! AACGGTGGTCGATGGCGGAG+AGG - chr1_4:50739823-50739842 Msa0168260:intron 65.0%
!! GTCGATGGCGGAGAGGAGGA+CGG - chr1_4:50739830-50739849 Msa0168260:intron 65.0%
CTGATGTCGCAGGGGAGGAG+AGG - chr1_4:50739914-50739933 Msa0168260:intron 65.0%
ATGTCGCAGGGGAGGAGAGG+AGG - chr1_4:50739917-50739936 Msa0168260:intron 65.0%
GGCAGACACGTGGGGTTCAC+TGG + chr1_4:50740521-50740540 None:intergenic 65.0%
GAACCCCACGTGTCTGCCTC+CGG - chr1_4:50740523-50740542 Msa0168260:intron 65.0%
AAGCCGGAGGCAGACACGTG+GGG + chr1_4:50740529-50740548 None:intergenic 65.0%
GAAGCCGGAGGCAGACACGT+GGG + chr1_4:50740530-50740549 None:intergenic 65.0%
TGCCTCCGGCTTCGAAGCAG+TGG - chr1_4:50740537-50740556 Msa0168260:intron 65.0%
CTCCACTGCTTCGAAGCCGG+AGG + chr1_4:50740542-50740561 None:intergenic 65.0%
GTTGCCACGTCACCTCTGGG+GGG - chr1_4:50742225-50742244 Msa0168260:intron 65.0%
CTCGCAGTGGCGAGTTAGGG+CGG + chr1_4:50742256-50742275 None:intergenic 65.0%
TTTCTTGGGGGGTGGGTGGG+TGG - chr1_4:50743019-50743038 Msa0168260:intron 65.0%
TTCTTGGGGGGTGGGTGGGT+GGG - chr1_4:50743020-50743039 Msa0168260:intron 65.0%
TTCGACGGCGGTCAACCGAG+TGG + chr1_4:50743381-50743400 None:intergenic 65.0%
ACCCTTAACCAGTGCCCCGG+GGG + chr1_4:50744349-50744368 None:intergenic 65.0%
GACCCTTAACCAGTGCCCCG+GGG + chr1_4:50744350-50744369 None:intergenic 65.0%
GCGGTGGAGGACAAAGGTGG+AGG + chr1_4:50745042-50745061 None:intergenic 65.0%
GAAGGGGCGGTGGAGGACAA+AGG + chr1_4:50745048-50745067 None:intergenic 65.0%
CATCACGGCAAACCCTGCCG+TGG - chr1_4:50745082-50745101 Msa0168260:five_prime_UTR 65.0%
! GCTGGGCCGAGGGTGTGTTT+AGG - chr1_4:50738617-50738636 Msa0168260:intron 65.0%
GGCGCGGTGGAGGATGAAGG+TGG + chr1_4:50737505-50737524 None:intergenic 70.0%
!! GGTGGTCGATGGCGGAGAGG+AGG - chr1_4:50739826-50739845 Msa0168260:intron 70.0%
!! GATGGCGGAGAGGAGGACGG+CGG - chr1_4:50739833-50739852 Msa0168260:intron 70.0%
GAGAGGAGGACGGCGGCAGA+GGG - chr1_4:50739840-50739859 Msa0168260:intron 70.0%
! ACGGCGGCAGAGGGAGGTGT+TGG - chr1_4:50739849-50739868 Msa0168260:intron 70.0%
!! GCGGCAGAGGGAGGTGTTGG+CGG - chr1_4:50739852-50739871 Msa0168260:intron 70.0%
!! CGGCAGAGGGAGGTGTTGGC+GGG - chr1_4:50739853-50739872 Msa0168260:intron 70.0%
!! CAGAGGGAGGTGTTGGCGGG+TGG - chr1_4:50739856-50739875 Msa0168260:intron 70.0%
!! AGGGAGGTGTTGGCGGGTGG+CGG - chr1_4:50739859-50739878 Msa0168260:intron 70.0%
CGAAGCCGGAGGCAGACACG+TGG + chr1_4:50740531-50740550 None:intergenic 70.0%
CTAGCCCCCCAGAGGTGACG+TGG + chr1_4:50742232-50742251 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr1_4:50744344-50744363 Msa0168260:intron 70.0%
!! GCCCCCGGGGCACTGGTTAA+GGG - chr1_4:50744345-50744364 Msa0168260:intron 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG + chr1_4:50744472-50744491 None:intergenic 70.0%
TAACCAGTGCCCCGGGGCAC+TGG - chr1_4:50744466-50744485 Msa0168260:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG + chr1_4:50744466-50744485 None:intergenic 70.0%
GGGGCGGTGGAGGACAAAGG+TGG + chr1_4:50745045-50745064 None:intergenic 70.0%
CTGAGCAGGAGCCGAAGGGG+CGG + chr1_4:50745061-50745080 None:intergenic 70.0%
CTTGGCGGGAGCCGAAGGCG+CGG + chr1_4:50737521-50737540 None:intergenic 75.0%
GGAGAGGAGGACGGCGGCAG+AGG - chr1_4:50739839-50739858 Msa0168260:intron 75.0%
AGGAGGACGGCGGCAGAGGG+AGG - chr1_4:50739843-50739862 Msa0168260:intron 75.0%
AGGGCGGTCTAGCCCCCCAG+AGG + chr1_4:50742240-50742259 None:intergenic 75.0%
TTGGGGGGTGGGTGGGTGGG+TGG - chr1_4:50743023-50743042 Msa0168260:intron 75.0%
TGGGGGGTGGGTGGGTGGGT+GGG - chr1_4:50743024-50743043 Msa0168260:intron 75.0%
AACCAGTGCCCCCGGGGCAC+TGG - chr1_4:50744338-50744357 Msa0168260:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG + chr1_4:50744343-50744362 None:intergenic 75.0%
AGGAGCCGAAGGGGCGGTGG+AGG + chr1_4:50745055-50745074 None:intergenic 75.0%
AGCAGGAGCCGAAGGGGCGG+TGG + chr1_4:50745058-50745077 None:intergenic 75.0%
!! GGGAGCCGAAGGCGCGGTGG+AGG + chr1_4:50737515-50737534 None:intergenic 80.0%
! GGGGGGTGGGTGGGTGGGTG+GGG - chr1_4:50743025-50743044 Msa0168260:intron 80.0%
! GGGGGTGGGTGGGTGGGTGG+GGG - chr1_4:50743026-50743045 Msa0168260:intron 80.0%
!! GGCGGGAGCCGAAGGCGCGG+TGG + chr1_4:50737518-50737537 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 50737238 50746354 50737238 ID=Msa0168260;Name=Msa0168260
chr1_4 mRNA 50737238 50746354 50737238 ID=Msa0168260-mRNA-1;Parent=Msa0168260;Name=Msa0168260-mRNA-1;_AED=0.07;_eAED=0.14;_QI=1588|0|0.25|1|0|0|4|0|394
chr1_4 exon 50737238 50738026 50737238 ID=Msa0168260-mRNA-1:exon:14932;Parent=Msa0168260-mRNA-1
chr1_4 exon 50738386 50738607 50738386 ID=Msa0168260-mRNA-1:exon:14931;Parent=Msa0168260-mRNA-1
chr1_4 exon 50738624 50738774 50738624 ID=Msa0168260-mRNA-1:exon:14930;Parent=Msa0168260-mRNA-1
chr1_4 exon 50744744 50746354 50744744 ID=Msa0168260-mRNA-1:exon:14929;Parent=Msa0168260-mRNA-1
chr1_4 five_prime_UTR 50744767 50746354 50744767 ID=Msa0168260-mRNA-1:five_prime_utr;Parent=Msa0168260-mRNA-1
chr1_4 CDS 50744744 50744766 50744744 ID=Msa0168260-mRNA-1:cds;Parent=Msa0168260-mRNA-1
chr1_4 CDS 50738624 50738774 50738624 ID=Msa0168260-mRNA-1:cds;Parent=Msa0168260-mRNA-1
chr1_4 CDS 50738386 50738607 50738386 ID=Msa0168260-mRNA-1:cds;Parent=Msa0168260-mRNA-1
chr1_4 CDS 50737238 50738026 50737238 ID=Msa0168260-mRNA-1:cds;Parent=Msa0168260-mRNA-1
Gene Sequence

>Msa0168260

ATGTATAAACTAAGGTGGTGTAGTGAATTGTATCTTACGTACCAAATGGAATCCGAAACATTGGTTTCTTTGTTACTTTTCTCTGCAACTCTCGTTTCGTTCTTATTCTTAGCCACAAAAAAACGATCCAAAACACCCTCCACAATCCCCAACTCATACCCTATCATTGGTTCTCCAACTTCCACCGCCTCATACAATGGATTTCTGACATTCTCCAAACTATCCCTTCCTCCACCTTTGTCCTCCACCGCCCCTTCGGCTCCTGCTCAGTCATCACGGCAAACCCTGCCGTGGTGCAACACATTCTCAAAACCAACTTCCCTTGCTACAACAAAGGTCCTACATTTCATCGATCCCTCTTCGAGTTTCTCGGTAACGGTATCTTCAACACTGACGCGACGGTTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTTGCCACAAAAATTGTTAGGGAAAAGAAAAAAGAGCTTGAAGAAAAGACAACCTTGGAATCGGTGGATATTTTGTCGCGATTTTTAAGTTCCGGTCATTCAGATGAATCTTTTGTAGTTGATATTGTGATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGTTAATCTCTAAGCATAGTCATGTAGAGAATGAGATTCTTAAAGAGATTACTAGAAAATCAATGATAGTTAGTTACGATGAGGTGAAGGATATGGTTTACACTCATGCATCGTTATGCGAGAGTATGAGATTGTATCCTCCAGTTCCGGTGGATGCCAAGGAAGCAGCCTACGATGATGTTTTGCCAGATGGAACATTAGTGAAGAAAGGGTGGATAGTTGCGTATCATGTATATGCTATGGGAAGGTCTGAGAAAATATGGGGATCCGATTGGGCTGAGTTTCGACCTGAGAGGTGGTTGAGTCGAGCTGACGATGGAAAATGGAGCTTTGTTGGAATGGATCCTTATACTTATCCGGTTTTTCAAGCTGGGCCGAGGGTGTGTTTAGGGAAAGAAATGGCGTTCTTACAGATGAAGAGGTTGGTTATTGGCATTATGAGGGAGTTTAGGGTGCTTCCAGCGATGGATGAAGGGGTTGAACCAGAGTTTGATTCACACCTTACTTCAATAATGAAAGGTGGCTTTCCAGTAAAGATCGAGAAGCGCATGTACACACATGAATAA
Protein sequence

>Msa0168260

MYKLRWCSELYLTYQMESETLVSLLLFSATLVSFLFLATKKRSKTPSTIPNSYPIIGSPTSTASYNGFLTFSKLSLPPPLSSTAPSAPAQSSRQTLPWCNTFSKPTSLATTKVLHFIDPSSSFSVTVSSTLTRRLKEAVAEVRGLATKIVREKKKELEEKTTLESVDILSRFLSSGHSDESFVVDIVISFILAGRDTTSAALTWFFWLISKHSHVENEILKEITRKSMIVSYDEVKDMVYTHASLCESMRLYPPVPVDAKEAAYDDVLPDGTLVKKGWIVAYHVYAMGRSEKIWGSDWAEFRPERWLSRADDGKWSFVGMDPYTYPVFQAGPRVCLGKEMAFLQMKRLVIGIMREFRVLPAMDEGVEPEFDSHLTSIMKGGFPVKIEKRMYTHE*