AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172210 MtrunA17_Chr1g0191031 94.245 973 22 3 1 971 1 941 0.0 1901
Msa0172210 MtrunA17_Chr7g0273801 69.920 994 237 13 1 971 1 955 0.0 1347
Msa0172210 MtrunA17_Chr1g0156381 67.056 428 132 3 1 422 1 425 0.0 610
Msa0172210 MtrunA17_Chr1g0156381 47.475 396 167 5 410 794 505 870 3.29e-113 374
Msa0172210 MtrunA17_Chr7g0240901 63.488 430 147 4 1 423 1 427 0.0 579
Msa0172210 MtrunA17_Chr7g0240901 51.648 364 144 3 435 796 529 862 7.23e-113 368
Msa0172210 MtrunA17_Chr4g0030651 64.569 429 141 5 1 423 1 424 0.0 568
Msa0172210 MtrunA17_Chr4g0030651 46.119 438 195 7 410 836 496 903 7.49e-112 368
Msa0172210 MtrunA17_Chr4g0025871 40.390 770 269 15 1 693 1 657 1.41e-174 525
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172210 AT1G54490.1 61.968 986 302 14 1 960 1 939 0.0 1165
Msa0172210 AT1G54490.2 61.069 917 290 13 64 960 12 881 0.0 1059
Msa0172210 AT1G75660.1 68.029 416 123 4 1 409 1 413 1.43e-180 551
Msa0172210 AT1G75660.1 46.782 404 162 5 412 793 501 873 2.63e-111 368
Msa0172210 AT5G42540.1 64.286 420 132 6 1 409 1 413 1.11e-171 528
Msa0172210 AT5G42540.1 45.628 366 162 4 435 792 521 857 6.46e-96 326
Msa0172210 AT5G42540.2 64.286 420 132 6 1 409 1 413 2.16e-171 527
Msa0172210 AT5G42540.2 44.297 377 162 5 435 792 521 868 6.60e-93 318

Find 309 sgRNAs with CRISPR-Local

Find 828 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTCCTCAGCTTTAGTTTC+TGG 0.126708 1_4:-57192366 None:intergenic
CCATCGAGGCCGCCAATTTC+TGG 0.148161 1_4:+57199028 Msa0172210:CDS
TACCCCTGGTACTAAATTTA+TGG 0.159962 1_4:+57191639 Msa0172210:CDS
AACCTAGCATTTGCGTTAAT+TGG 0.176869 1_4:-57197710 None:intergenic
AAAACCCAGTCTTCACATTT+TGG 0.192220 1_4:-57198970 None:intergenic
GGAACGTTGCTGATTCATTT+TGG 0.198460 1_4:-57191400 None:intergenic
CAAACCATTTGATCAGCTTA+TGG 0.199225 1_4:+57195699 Msa0172210:CDS
GTGCTTTAGTATTCCACTTT+AGG 0.206465 1_4:-57199108 None:intergenic
CTCATCAATAAATGGCAATT+TGG 0.206862 1_4:-57196123 None:intergenic
CACAAATCGGGGTTCTAAAT+TGG 0.228452 1_4:-57199059 None:intergenic
AGAACACCCTTAACATTAAA+TGG 0.238490 1_4:+57198708 Msa0172210:CDS
ACTACACCATCCGGAGGTTT+TGG 0.243525 1_4:-57198047 None:intergenic
TTGCTTCATTCAATTCAATT+TGG 0.251960 1_4:-57189643 None:intergenic
TGCTTTAGTATTCCACTTTA+GGG 0.260712 1_4:-57199107 None:intergenic
GATATTTCTTCTTGTGAATA+GGG 0.264564 1_4:-57192407 None:intergenic
AATTTCTTCTCATCAATAAA+TGG 0.269485 1_4:-57196131 None:intergenic
TCAACATGCGCCCCTGTTAT+TGG 0.271504 1_4:-57199365 None:intergenic
ATGCACTGCCTGACAAATAT+AGG 0.272218 1_4:+57195824 Msa0172210:CDS
TGAATATTTGCAATATGAAT+TGG 0.308477 1_4:+57192543 Msa0172210:CDS
AGCAACGTTCCCGGCGGTTC+CGG 0.309948 1_4:+57191412 Msa0172210:CDS
TACAAACAATGTTGAGTATT+CGG 0.314063 1_4:-57192008 None:intergenic
AATCTCAAAATCTGTCAAAA+AGG 0.314339 1_4:-57195971 None:intergenic
TTGGTTGTTGGTCCAGAAAT+TGG 0.315729 1_4:-57199040 None:intergenic
TATTATTCCATTTAATGTTA+AGG 0.315998 1_4:-57198715 None:intergenic
TTCTTGGATTAGAATGTAAC+TGG 0.317914 1_4:+57199552 Msa0172210:three_prime_UTR
CTAGGATACATTCCATTTAC+AGG 0.321321 1_4:-57199130 None:intergenic
AGGTATTATGTTGAAAAGTT+TGG 0.322326 1_4:+57193709 Msa0172210:CDS
AATACTAAAGCACCTGTAAA+TGG 0.324348 1_4:+57199118 Msa0172210:CDS
TCTGGATATGGAAAATATTC+TGG 0.324999 1_4:+57198806 Msa0172210:CDS
CTTTCTGATTCGAATGTTCC+TGG 0.326687 1_4:+57191924 Msa0172210:CDS
TACCAGAATCTGGAGTTTCT+TGG 0.327695 1_4:-57199231 None:intergenic
GCAACGTTCCCGGCGGTTCC+GGG 0.327820 1_4:+57191413 Msa0172210:CDS
ATTATTCCATTTAATGTTAA+GGG 0.331340 1_4:-57198714 None:intergenic
AATACTCAACATTGTTTGTA+TGG 0.331774 1_4:+57192011 Msa0172210:CDS
ATTGTACCGTCTCCCATTGA+TGG 0.332636 1_4:+57197875 Msa0172210:CDS
ATTCACAGTTTCTGAACATC+TGG 0.335839 1_4:+57192512 Msa0172210:CDS
TGATATTTCTTCTTGTGAAT+AGG 0.336331 1_4:-57192408 None:intergenic
ACCAGAATCTGGAGTTTCTT+GGG 0.340136 1_4:-57199230 None:intergenic
TACCTCAATGATAGTGTTCC+AGG 0.340863 1_4:+57199490 Msa0172210:three_prime_UTR
CTAGTTGCATAACCAATAAC+AGG 0.340870 1_4:+57199353 Msa0172210:three_prime_UTR
GTATTTCTGTGCTTCTTTGT+CGG 0.347913 1_4:+57192619 Msa0172210:CDS
TAGAATTTGACAAGCGTAGT+AGG 0.349742 1_4:+57199738 Msa0172210:three_prime_UTR
GTGGGATGAATGGATATCTT+TGG 0.350893 1_4:+57197825 Msa0172210:CDS
TGTCAGCCGTGCACATGATT+TGG 0.352233 1_4:+57197622 Msa0172210:CDS
AAACCATTTGATCAGCTTAT+GGG 0.353481 1_4:+57195700 Msa0172210:CDS
TGGAACTGTTCTTGATGCCT+TGG 0.354057 1_4:-57198950 None:intergenic
CAAGTATCTGGAGCAATAAC+TGG 0.354247 1_4:+57198650 Msa0172210:CDS
CGGTTACAACGTAACATTCC+TGG 0.354498 1_4:+57191978 Msa0172210:CDS
GCAATAACTGGATCTCAATT+AGG 0.356190 1_4:+57198662 Msa0172210:CDS
CCCCAAGAAACTCCAGATTC+TGG 0.357264 1_4:+57199229 Msa0172210:CDS
ACTTGATTACTCTCGATATC+TGG 0.357455 1_4:-57197902 None:intergenic
CAGCTGCAAAATGGCCAGTT+TGG 0.357659 1_4:-57192329 None:intergenic
AACTCAATTCCGTTGGGATT+GGG 0.365365 1_4:-57189815 None:intergenic
TCAGCTGGACCATCTGGATA+TGG 0.366429 1_4:+57198794 Msa0172210:CDS
AGTAAGCGTCACCAACACTA+TGG 0.368979 1_4:+57189691 Msa0172210:exon
TCTGATAGGTCACAAGTATC+TGG 0.369819 1_4:+57198638 Msa0172210:intron
AGGCGTCAAGAAGCTGCATC+TGG 0.374781 1_4:+57199151 Msa0172210:CDS
TTCCAATCAGCTGGACCATC+TGG 0.376364 1_4:+57198788 Msa0172210:CDS
CATGACAATCAGCTGCAAAA+TGG 0.376562 1_4:-57192338 None:intergenic
GAACATCAAATTGTGGGTAT+AGG 0.377510 1_4:+57199589 Msa0172210:three_prime_UTR
TTTCCTCAGCCTTTCCTCTT+CGG 0.380180 1_4:-57191548 None:intergenic
GAGAACACTAACAGTTATTA+TGG 0.386258 1_4:+57198830 Msa0172210:CDS
AGACAACCACTTTGATAAAT+CGG 0.389797 1_4:-57189576 None:intergenic
TATTCACAAGAAGAAATATC+AGG 0.390134 1_4:+57192410 Msa0172210:CDS
TGCACTGCCTGACAAATATA+GGG 0.393425 1_4:+57195825 Msa0172210:CDS
CACTATTGATTACCAGAATC+TGG 0.395476 1_4:-57199241 None:intergenic
TCTTTCAAATGAATCACATC+AGG 0.395671 1_4:-57199391 None:intergenic
ATCTCTAATGTTGGCATATG+AGG 0.396928 1_4:-57192655 None:intergenic
AAAGTTTGGTGCATCAAGTC+TGG 0.397453 1_4:+57193723 Msa0172210:CDS
TGATAAATCGGAGGAGTATA+CGG 0.398993 1_4:-57189564 None:intergenic
ATCCAGATGGTCCAGCTGAT+TGG 0.402539 1_4:-57198790 None:intergenic
AAATGAATCAGCAACGTTCC+CGG 0.404265 1_4:+57191403 Msa0172210:CDS
AATGGTTTGAATGGCTCTCC+AGG 0.409476 1_4:-57195685 None:intergenic
GTTAAAGATTTAGCTGGGAT+TGG 0.410975 1_4:+57199766 Msa0172210:three_prime_UTR
GGAAATGTTAAAGATTTAGC+TGG 0.411695 1_4:+57199760 Msa0172210:three_prime_UTR
GAACTCAATTCCGTTGGGAT+TGG 0.413495 1_4:-57189816 None:intergenic
ACCCGAGTTCTGCACAAATC+GGG 0.418494 1_4:-57199071 None:intergenic
TCAATCTCAAAAGGAGGGTT+GGG 0.418825 1_4:-57192571 None:intergenic
CTGTTATTGGTTATGCAACT+AGG 0.418922 1_4:-57199352 None:intergenic
GTAGTACAAACCTTGCCATC+AGG 0.423189 1_4:-57189887 None:intergenic
TGAGTTCGATAACTTGTACT+TGG 0.423822 1_4:+57189832 Msa0172210:CDS
CGGGGTTCTAAATTGGTTGT+TGG 0.424536 1_4:-57199052 None:intergenic
GAAACGAGTTCGAGTTCAAC+AGG 0.427322 1_4:+57193231 Msa0172210:CDS
GACCCGAGTTCTGCACAAAT+CGG 0.429056 1_4:-57199072 None:intergenic
ATTAGCAGTGGTGGGATGAA+TGG 0.431329 1_4:+57197815 Msa0172210:intron
TCAAACCTTCTCCTGTGCTT+TGG 0.433255 1_4:+57198322 Msa0172210:CDS
TTGTTCCGTGGCATGGAACT+AGG 0.434019 1_4:+57199632 Msa0172210:three_prime_UTR
AGCTGATCAAATGGTTTGAA+TGG 0.434925 1_4:-57195694 None:intergenic
TGAGGGAGAACATAAAATAA+TGG 0.435875 1_4:+57191947 Msa0172210:CDS
TGGTGTAGTGATACCCAAAA+AGG 0.436441 1_4:+57198061 Msa0172210:CDS
AAGCTTCTTTACCTTGCAAC+TGG 0.436653 1_4:+57190069 Msa0172210:CDS
GCATGAAGACAATGTTGGTC+GGG 0.436656 1_4:+57198344 Msa0172210:CDS
CTGTTTGTTGTATGGCGAAC+TGG 0.437047 1_4:-57198764 None:intergenic
TGGTTATGCAACTAGGATAC+AGG 0.437875 1_4:-57199345 None:intergenic
ATTGGAACCTGTTTGTTGTA+TGG 0.442068 1_4:-57198772 None:intergenic
ATACACCGTTATAATAATAC+TGG 0.443894 1_4:-57194637 None:intergenic
ATTTGCCAGTATTATTATAA+CGG 0.444027 1_4:+57194632 Msa0172210:CDS
CCAGAAATTGGCGGCCTCGA+TGG 0.445376 1_4:-57199028 None:intergenic
CAGGAATGTTACGTTGTAAC+CGG 0.445921 1_4:-57191977 None:intergenic
ACATTTGAGTCTGAAGTCTC+AGG 0.445971 1_4:-57191613 None:intergenic
CTTCATGAACAGCGGCAGAT+TGG 0.447850 1_4:-57193195 None:intergenic
GTATAGGAATTTAGCGCAAT+TGG 0.448133 1_4:+57199605 Msa0172210:three_prime_UTR
ACGGTGTATGCTCATGGAAA+TGG 0.448433 1_4:+57194651 Msa0172210:CDS
GGTGCTGCTCTGATTTGCAT+TGG 0.450323 1_4:+57199457 Msa0172210:three_prime_UTR
CAGGTCAAGTTAGGGGAGCC+TGG 0.451540 1_4:+57193676 Msa0172210:intron
TGGGATGAATGGATATCTTT+GGG 0.458362 1_4:+57197826 Msa0172210:CDS
GCAAAAGGAGCATAATGATA+CGG 0.458852 1_4:-57195619 None:intergenic
ATCAAATCCCTATATTTGTC+AGG 0.459480 1_4:-57195832 None:intergenic
GTCAATCTCAAAAGGAGGGT+TGG 0.462823 1_4:-57192572 None:intergenic
GATTGAACCACAACCCTGCC+TGG 0.464174 1_4:+57191701 Msa0172210:CDS
AATATGTGGAAGGCCTTTGT+TGG 0.470088 1_4:+57194609 Msa0172210:CDS
CAGTTCCAAAATGTGAAGAC+TGG 0.471572 1_4:+57198965 Msa0172210:CDS
GATATCTGGCAATCCATCAA+TGG 0.473490 1_4:-57197888 None:intergenic
AAAACTTCATCATAAGTAGC+TGG 0.480642 1_4:-57189994 None:intergenic
GGACAGGTAATTACTTTACC+TGG 0.481240 1_4:+57192282 Msa0172210:intron
CAAGGCACCTCAAACACAAA+AGG 0.481541 1_4:-57199276 None:intergenic
GCAAGGTAAAGAAGCTTCCT+TGG 0.481590 1_4:-57190063 None:intergenic
TATCCAGTCTCATCTAATGC+TGG 0.484845 1_4:+57198890 Msa0172210:CDS
CGTTCAAAGTCAATCTCAAA+AGG 0.485034 1_4:-57192580 None:intergenic
GTTAGGGGAGCCTGGATACA+AGG 0.486533 1_4:+57193684 Msa0172210:CDS
TTCTTATTCTGATATTTACA+TGG 0.486872 1_4:+57195945 Msa0172210:CDS
CTCCAGTACGTCCCCTAAAG+TGG 0.486894 1_4:+57199095 Msa0172210:CDS
ATAAAATAATGGAATACATC+CGG 0.489514 1_4:+57191958 Msa0172210:CDS
TAATACCTTTCCTTGTATCC+AGG 0.490409 1_4:-57193694 None:intergenic
CAGTTCGCCATACAACAAAC+AGG 0.491248 1_4:+57198765 Msa0172210:CDS
AGTCTCATCTAATGCTGGGC+AGG 0.491463 1_4:+57198895 Msa0172210:CDS
TTGGGTATCACTACACCATC+CGG 0.491979 1_4:-57198056 None:intergenic
CTGTAAATGGAATGTATCCT+AGG 0.492380 1_4:+57199131 Msa0172210:CDS
TTCCACTTTAGGGGACGTAC+TGG 0.495067 1_4:-57199097 None:intergenic
TTCTGCATTGTATGTTTGAA+AGG 0.496005 1_4:+57199817 Msa0172210:three_prime_UTR
ATAATGAAGAGATGAGAGCT+AGG 0.496892 1_4:+57193374 Msa0172210:CDS
GTAATCAATAGTGGTGGTTG+TGG 0.499240 1_4:+57199251 Msa0172210:exon
CAGATTCTGGTAATCAATAG+TGG 0.500005 1_4:+57199242 Msa0172210:CDS
TCAACATTGTTTGTATGGAT+TGG 0.500025 1_4:+57192016 Msa0172210:CDS
CGACAAGTTATCTCACCAGC+AGG 0.500462 1_4:-57195889 None:intergenic
AGGTTCACTTCTCAATATTG+AGG 0.500834 1_4:+57192171 Msa0172210:CDS
ATATCTGGCAATCCATCAAT+GGG 0.500898 1_4:-57197887 None:intergenic
CACAATTTGATGTTCTCCAC+CGG 0.501120 1_4:-57199581 None:intergenic
GAAATGTTAAAGATTTAGCT+GGG 0.503359 1_4:+57199761 Msa0172210:three_prime_UTR
TTGGGTTTAGAAGCGTCGAT+AGG 0.504076 1_4:-57189797 None:intergenic
ACCTCTCTGATCTCTAATGT+TGG 0.505160 1_4:-57192664 None:intergenic
TTGGTCGGGGACAGCAAGGA+AGG 0.505479 1_4:+57198358 Msa0172210:CDS
GGTTCACTTCTCAATATTGA+GGG 0.508261 1_4:+57192172 Msa0172210:CDS
GAAGCTTGAAGACACATTAA+CGG 0.510764 1_4:+57196169 Msa0172210:CDS
ACCCCGATTTGTGCAGAACT+CGG 0.512326 1_4:+57199069 Msa0172210:CDS
TGCAGAATACAGATGGTGGA+TGG 0.512569 1_4:-57199801 None:intergenic
ACTGATGCATATATATAGAA+AGG 0.512680 1_4:+57192897 Msa0172210:CDS
GGTGGTTATCTTACTTATGC+GGG 0.513220 1_4:+57192934 Msa0172210:CDS
CTGAACCTTATCAGAAAATG+AGG 0.514537 1_4:-57193428 None:intergenic
TGGGTTTAGAAGCGTCGATA+GGG 0.517050 1_4:-57189796 None:intergenic
GGGATGTGTCCATGTCTACA+AGG 0.517479 1_4:-57198026 None:intergenic
ACAAACAGGTTCCAATCAGC+TGG 0.518506 1_4:+57198779 Msa0172210:CDS
GTAAGCGTCACCAACACTAT+GGG 0.520319 1_4:+57189692 Msa0172210:exon
TTCTTTATCTGCTTATGATG+AGG 0.520588 1_4:-57199181 None:intergenic
GAGATGAGAGCTAGGGCAAG+AGG 0.521283 1_4:+57193382 Msa0172210:CDS
TGAATAGGGATTTCATCAGC+AGG 0.521354 1_4:-57192393 None:intergenic
GGCGTCAAGAAGCTGCATCT+GGG 0.521810 1_4:+57199152 Msa0172210:CDS
TGCATTCCGTGTGTAAAGTC+TGG 0.522291 1_4:+57199659 Msa0172210:three_prime_UTR
TTATCGAACTCAATTCCGTT+GGG 0.522931 1_4:-57189821 None:intergenic
TGGAAAACGATTTGCATGGC+AGG 0.526103 1_4:+57196002 Msa0172210:CDS
TTGCCATCAGGGTGAAAACA+AGG 0.527426 1_4:-57189875 None:intergenic
TTATCTTACTTATGCGGGTG+AGG 0.528053 1_4:+57192939 Msa0172210:CDS
TAGAAAGGAATTCACTGCCA+TGG 0.528597 1_4:+57192912 Msa0172210:CDS
GATTCGAATGTTCCTGGTGA+GGG 0.530248 1_4:+57191930 Msa0172210:CDS
TAATACATCCCACGGAGTGT+TGG 0.532494 1_4:+57198733 Msa0172210:CDS
TCATCATAAGTAGCTGGTGC+TGG 0.533007 1_4:-57189988 None:intergenic
GTTATCGAACTCAATTCCGT+TGG 0.533750 1_4:-57189822 None:intergenic
GGAAGAACCTTGAAGCAGGC+AGG 0.533838 1_4:-57195726 None:intergenic
CTCATCTAATGCTGGGCAGG+TGG 0.534927 1_4:+57198898 Msa0172210:CDS
CAAAAGGAGCATAATGATAC+GGG 0.536914 1_4:-57195618 None:intergenic
ATTATAACGGTGTATGCTCA+TGG 0.537434 1_4:+57194645 Msa0172210:CDS
TCATGCCAAAGCACAGGAGA+AGG 0.538530 1_4:-57198327 None:intergenic
ATTGGCGGCCTCGATGGTGC+AGG 0.540550 1_4:-57199022 None:intergenic
GATGCAGCTTCTTGACGCCT+AGG 0.540659 1_4:-57199148 None:intergenic
GTTGTTGGTCCAGAAATTGG+CGG 0.541645 1_4:-57199037 None:intergenic
GGCTGCAAAAGATGCAGCTG+AGG 0.541916 1_4:+57191434 Msa0172210:CDS
AACCATTTGATCAGCTTATG+GGG 0.542591 1_4:+57195701 Msa0172210:CDS
ATCCAGTCTCATCTAATGCT+GGG 0.544164 1_4:+57198891 Msa0172210:CDS
GACTCAAATGTCATTACCCC+TGG 0.547550 1_4:+57191625 Msa0172210:CDS
TCTTTAAGATCAGAAGCAAA+AGG 0.548870 1_4:-57195634 None:intergenic
GGCATGAAGACAATGTTGGT+CGG 0.549089 1_4:+57198343 Msa0172210:CDS
GGGTGGTTATCTTACTTATG+CGG 0.549668 1_4:+57192933 Msa0172210:CDS
CACCAATTAACGCAAATGCT+AGG 0.550066 1_4:+57197708 Msa0172210:CDS
TAATCAATAGTGGTGGTTGT+GGG 0.550651 1_4:+57199252 Msa0172210:exon
CCCCGATTTGTGCAGAACTC+GGG 0.552399 1_4:+57199070 Msa0172210:CDS
TGATTCGAATGTTCCTGGTG+AGG 0.556459 1_4:+57191929 Msa0172210:CDS
CCAGAATCTGGAGTTTCTTG+GGG 0.557442 1_4:-57199229 None:intergenic
TACAGGAAGCCGAAGAGGAA+AGG 0.557457 1_4:+57191539 Msa0172210:intron
ACAAAACACTTATCTTGTCC+AGG 0.557626 1_4:-57192300 None:intergenic
TGCCCAGCATTAGATGAGAC+TGG 0.557660 1_4:-57198893 None:intergenic
TGTGTGATGATTAGATGCAG+TGG 0.559254 1_4:+57199433 Msa0172210:three_prime_UTR
AGAATTTGACAAGCGTAGTA+GGG 0.560578 1_4:+57199739 Msa0172210:three_prime_UTR
AGAAAGGAATTCACTGCCAT+GGG 0.562929 1_4:+57192913 Msa0172210:CDS
TTAGAACACAAGATAGGCCA+AGG 0.563818 1_4:+57198933 Msa0172210:CDS
CGGTGGAGAACATCAAATTG+TGG 0.568643 1_4:+57199582 Msa0172210:three_prime_UTR
TAGTACAAACCTTGCCATCA+GGG 0.569197 1_4:-57189886 None:intergenic
ATACAGATGGTGGATGGGCA+TGG 0.570895 1_4:-57199795 None:intergenic
AGTTCCAAAATGTGAAGACT+GGG 0.571193 1_4:+57198966 Msa0172210:CDS
CTTTCAAATGAATCACATCA+GGG 0.572459 1_4:-57199390 None:intergenic
GGTGGAGAACATCAAATTGT+GGG 0.573141 1_4:+57199583 Msa0172210:three_prime_UTR
ATAGGTCCACTTCGAGGAGT+GGG 0.574461 1_4:-57199310 None:intergenic
TGATTTGCATTGGTTTGACA+TGG 0.574958 1_4:+57199467 Msa0172210:three_prime_UTR
ACTACGTCGGAGATCGAGAG+TGG 0.575023 1_4:-57189752 None:intergenic
TGGACACATCCCAAAACCTC+CGG 0.576106 1_4:+57198037 Msa0172210:CDS
GGGTTTAGAAGCGTCGATAG+GGG 0.576781 1_4:-57189795 None:intergenic
GAGTAATACTTCAAGAGCCA+CGG 0.576974 1_4:+57193404 Msa0172210:CDS
GACAGCATAGGTCCACTTCG+AGG 0.578283 1_4:-57199316 None:intergenic
TAGAGGAAGAACCTTGAAGC+AGG 0.581158 1_4:-57195730 None:intergenic
TTGTCTTCATGCCAAAGCAC+AGG 0.582226 1_4:-57198333 None:intergenic
ATTCCGTGTGTAAAGTCTGG+TGG 0.582323 1_4:+57199662 Msa0172210:three_prime_UTR
TCTGCTTTAACAATGGAGGA+AGG 0.582852 1_4:+57198992 Msa0172210:CDS
AGAATGTAACTGGTGTAAGC+CGG 0.583343 1_4:+57199562 Msa0172210:three_prime_UTR
TCATCATAAGCAGATAAAGA+AGG 0.585192 1_4:+57199183 Msa0172210:CDS
AAGCCGAAGAGGAAAGGCTG+AGG 0.585870 1_4:+57191545 Msa0172210:CDS
CATAGGTCCACTTCGAGGAG+TGG 0.586614 1_4:-57199311 None:intergenic
TTCACAGTTTCTGAACATCT+GGG 0.587038 1_4:+57192513 Msa0172210:CDS
CAGAAACTAAAGCTGAGGAC+GGG 0.587267 1_4:+57192367 Msa0172210:CDS
AGGAAAGAATTCGTCGAGGA+GGG 0.588221 1_4:+57191565 Msa0172210:CDS
GGGGACAGCAAGGAAGGGAA+AGG 0.588657 1_4:+57198364 Msa0172210:CDS
TCAAAGTCAATCTCAAAAGG+AGG 0.589615 1_4:-57192577 None:intergenic
ATTAATGAATGAGAGCGTGA+TGG 0.590724 1_4:+57189601 Msa0172210:five_prime_UTR
GATTGACTTTGAACGACTAG+TGG 0.590806 1_4:+57192588 Msa0172210:CDS
GTATACGGCAGTAATGTTTG+AGG 0.591085 1_4:-57189549 None:intergenic
TATCTGCCCACTCCTCGAAG+TGG 0.591578 1_4:+57199304 Msa0172210:three_prime_UTR
ATGGTTTGAATGGCTCTCCA+GGG 0.592631 1_4:-57195684 None:intergenic
GCAGAATACAGATGGTGGAT+GGG 0.594331 1_4:-57199800 None:intergenic
TAATGAAGAGATGAGAGCTA+GGG 0.596480 1_4:+57193375 Msa0172210:CDS
CACTTTAGGGGACGTACTGG+AGG 0.599208 1_4:-57199094 None:intergenic
TGAGTATTCGGATTGAAACC+AGG 0.599533 1_4:-57191996 None:intergenic
CATACAATGCAGAATACAGA+TGG 0.599947 1_4:-57199808 None:intergenic
AAATGGAATAATACATCCCA+CGG 0.600447 1_4:+57198725 Msa0172210:CDS
TCTGTCTAGTCATTGCGCCA+TGG 0.600714 1_4:-57198865 None:intergenic
CCAGAAACTAAAGCTGAGGA+CGG 0.601449 1_4:+57192366 Msa0172210:CDS
ACCTCAATGATAGTGTTCCA+GGG 0.601697 1_4:+57199491 Msa0172210:three_prime_UTR
CTTTGGCATGAAGACAATGT+TGG 0.602709 1_4:+57198339 Msa0172210:CDS
AGAAATTGCTTGCTTCCACA+AGG 0.603572 1_4:+57196147 Msa0172210:CDS
CATGAAGACAATGTTGGTCG+GGG 0.605014 1_4:+57198345 Msa0172210:CDS
GAGGTTGCTCCAACACTCCG+TGG 0.605581 1_4:-57198742 None:intergenic
AGTAATACTTCAAGAGCCAC+GGG 0.606371 1_4:+57193405 Msa0172210:CDS
TATCTCAATCCTTGTAGACA+TGG 0.608911 1_4:+57198017 Msa0172210:CDS
ACTCCTCCGATTTATCAAAG+TGG 0.609244 1_4:+57189570 Msa0172210:five_prime_UTR
TGGTCGGGGACAGCAAGGAA+GGG 0.610490 1_4:+57198359 Msa0172210:CDS
AATGTTGGTCGGGGACAGCA+AGG 0.612021 1_4:+57198354 Msa0172210:CDS
TCACTTCTCAATATTGAGGG+AGG 0.612602 1_4:+57192175 Msa0172210:CDS
GGCAATCCATCAATGGGAGA+CGG 0.612895 1_4:-57197881 None:intergenic
AAGCTTCCTTGGACGAACCA+AGG 0.614170 1_4:-57190052 None:intergenic
TGCCATAAATTTAGTACCAG+GGG 0.616503 1_4:-57191641 None:intergenic
CCCGAGTTCTGCACAAATCG+GGG 0.617800 1_4:-57199070 None:intergenic
AGGTTGCTCCAACACTCCGT+GGG 0.618962 1_4:-57198741 None:intergenic
AGTCATACATACCAGTTGCA+AGG 0.619127 1_4:-57190080 None:intergenic
GGTAACGATCGGCGAGCCAG+CGG 0.619212 1_4:-57189730 None:intergenic
GATCGAGAGTGGGTAACGAT+CGG 0.619774 1_4:-57189741 None:intergenic
TTCCGTGTGTAAAGTCTGGT+GGG 0.621361 1_4:+57199663 Msa0172210:three_prime_UTR
CAAAGTCAATCTCAAAAGGA+GGG 0.624467 1_4:-57192576 None:intergenic
ATTTATGGCATCTCTGTCAG+TGG 0.624598 1_4:+57191654 Msa0172210:CDS
AAGGAATTCACTGCCATGGG+TGG 0.626307 1_4:+57192916 Msa0172210:CDS
GCGTCAAGAAGCTGCATCTG+GGG 0.630800 1_4:+57199153 Msa0172210:CDS
TGAAACACATCTTTCATGAG+TGG 0.631778 1_4:-57197687 None:intergenic
ACCCTGGAACACTATCATTG+AGG 0.633647 1_4:-57199492 None:intergenic
ATGCCATAAATTTAGTACCA+GGG 0.633893 1_4:-57191642 None:intergenic
AGCATTACAGGAAGCCGAAG+AGG 0.635386 1_4:+57191534 Msa0172210:intron
ACAATGCAGAATACAGATGG+TGG 0.635913 1_4:-57199805 None:intergenic
GCTTTAGTATTCCACTTTAG+GGG 0.639695 1_4:-57199106 None:intergenic
GATGCCATAAATTTAGTACC+AGG 0.641743 1_4:-57191643 None:intergenic
TGCAGGACGAAGAACAGCGT+CGG 0.642893 1_4:+57197573 Msa0172210:intron
TAAGCGTCACCAACACTATG+GGG 0.644124 1_4:+57189693 Msa0172210:exon
ATGTAACTGGTGTAAGCCGG+TGG 0.644196 1_4:+57199565 Msa0172210:three_prime_UTR
AATACTGGCAAATCCAACAA+AGG 0.645916 1_4:-57194622 None:intergenic
CACATCCCAAAACCTCCGGA+TGG 0.646836 1_4:+57198041 Msa0172210:CDS
ACCATTTGATCAGCTTATGG+GGG 0.647585 1_4:+57195702 Msa0172210:CDS
TATTGAGAAGTGAACCTCGT+GGG 0.648171 1_4:-57192165 None:intergenic
AACAACCTAGTTCCATGCCA+CGG 0.651772 1_4:-57199637 None:intergenic
TGGTTTGAATGGCTCTCCAG+GGG 0.653431 1_4:-57195683 None:intergenic
AACTTGTACTTGGATATGAA+CGG 0.654472 1_4:+57189842 Msa0172210:CDS
GAGGAAAGAATTCGTCGAGG+AGG 0.656944 1_4:+57191564 Msa0172210:CDS
GGGAGCCTGGATACAAGGAA+AGG 0.657433 1_4:+57193689 Msa0172210:CDS
TAGTTGCATAACCAATAACA+GGG 0.657809 1_4:+57199354 Msa0172210:three_prime_UTR
TGTGTCTTCAAGCTTCCTTG+TGG 0.659538 1_4:-57196162 None:intergenic
GATTTGATCTTCATGAACAG+CGG 0.659769 1_4:-57193203 None:intergenic
ATAAGTAAGATAACCACCCA+TGG 0.660100 1_4:-57192929 None:intergenic
AACCCACCAGACTTTACACA+CGG 0.669386 1_4:-57199665 None:intergenic
GTTTGGTGCATCAAGTCTGG+AGG 0.670375 1_4:+57193726 Msa0172210:CDS
TACAGGTGGAGAGACAGCAT+AGG 0.670990 1_4:-57199328 None:intergenic
TGCCATCAGGGTGAAAACAA+GGG 0.672515 1_4:-57189874 None:intergenic
TGAATGGAAAACGATTTGCA+TGG 0.674776 1_4:+57195998 Msa0172210:CDS
TTTGTTGTATGGCGAACTGG+AGG 0.678143 1_4:-57198761 None:intergenic
TAAGCCAGAAACTAAAGCTG+AGG 0.678336 1_4:+57192362 Msa0172210:CDS
TTATGCAACTAGGATACAGG+TGG 0.681942 1_4:-57199342 None:intergenic
TTATCAGAAAATGAGGCCCG+TGG 0.682170 1_4:-57193421 None:intergenic
GTGAAGCCAAATCATGTGCA+CGG 0.683896 1_4:-57197628 None:intergenic
GAGTGGGCAGATAGAAACCA+AGG 0.684888 1_4:-57199294 None:intergenic
CAACCACTTTGATAAATCGG+AGG 0.687010 1_4:-57189573 None:intergenic
GACAAGTTATCTCACCAGCA+GGG 0.693407 1_4:-57195888 None:intergenic
GGTATCACTACACCATCCGG+AGG 0.693898 1_4:-57198053 None:intergenic
TATGGAGAACATAATCACCA+TGG 0.694386 1_4:+57198848 Msa0172210:CDS
ATTCTGGTAATCAATAGTGG+TGG 0.697737 1_4:+57199245 Msa0172210:exon
GTGATGATTAGATGCAGTGG+AGG 0.704655 1_4:+57199436 Msa0172210:three_prime_UTR
GCTTCTAAACCCAATCCCAA+CGG 0.705964 1_4:+57189806 Msa0172210:CDS
CTACGTCGGAGATCGAGAGT+GGG 0.712363 1_4:-57189751 None:intergenic
TGAATCAGCAACGTTCCCGG+CGG 0.716241 1_4:+57191406 Msa0172210:CDS
AAGCGTCACCAACACTATGG+GGG 0.716908 1_4:+57189694 Msa0172210:exon
GATTGAGACCTGCACCATCG+AGG 0.726329 1_4:+57199014 Msa0172210:CDS
ATATTGAGAAGTGAACCTCG+TGG 0.763937 1_4:-57192166 None:intergenic
TCCGACGTAGTCGAAGACGA+CGG 0.766547 1_4:+57189764 Msa0172210:CDS
AGTTGCATAACCAATAACAG+GGG 0.766686 1_4:+57199355 Msa0172210:three_prime_UTR
GCTCTCTTTAGCTACCCACG+AGG 0.777239 1_4:+57192151 Msa0172210:CDS
GCTGAGGAAAGAATTCGTCG+AGG 0.778095 1_4:+57191561 Msa0172210:CDS
GCCGTCGTCTTCGACTACGT+CGG 0.784088 1_4:-57189765 None:intergenic
GCCAACATTAGAGATCAGAG+AGG 0.794461 1_4:+57192663 Msa0172210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTTATTTATTATT+GGG + chr1_4:57194678-57194697 Msa0172210:intron 0.0%
!!! TATATTATTTTTAATAAATA+AGG + chr1_4:57196804-57196823 Msa0172210:intron 0.0%
!!! CAAATAAATTATTTTCTTTT+AGG - chr1_4:57196833-57196852 None:intergenic 10.0%
!! TTAATCTATCTATATTAAAA+TGG - chr1_4:57197362-57197381 None:intergenic 10.0%
!!! TTATGATGAAGTTTTTAAAT+TGG + chr1_4:57190002-57190021 Msa0172210:CDS 15.0%
!!! TAAAAACAATGAAATGTTTT+GGG - chr1_4:57190483-57190502 None:intergenic 15.0%
!!! TTAAAAACAATGAAATGTTT+TGG - chr1_4:57190484-57190503 None:intergenic 15.0%
!! TGTCTCTTTATATTTATTTA+TGG + chr1_4:57191867-57191886 Msa0172210:intron 15.0%
!! TTATTACTATGTATATGATA+TGG + chr1_4:57192758-57192777 Msa0172210:intron 15.0%
!! TATTACTATGTATATGATAT+GGG + chr1_4:57192759-57192778 Msa0172210:intron 15.0%
!!! AATATGTTTTTGTATTTTCT+TGG + chr1_4:57193470-57193489 Msa0172210:intron 15.0%
!! AAATAAAAAATTAAGTGAGT+CGG + chr1_4:57195339-57195358 Msa0172210:intron 15.0%
!!! GAAAAAATTATTTCTAGATT+AGG - chr1_4:57195664-57195683 None:intergenic 15.0%
!!! AAAAAATCAAACTTAACTTT+TGG - chr1_4:57196070-57196089 None:intergenic 15.0%
!!! TTGATTTTTTAAACTAGTTT+TGG + chr1_4:57196080-57196099 Msa0172210:intron 15.0%
!!! TGATTTTTTAAACTAGTTTT+GGG + chr1_4:57196081-57196100 Msa0172210:intron 15.0%
!!! TTTTATTGTATTTATGTGTA+TGG - chr1_4:57196738-57196757 None:intergenic 15.0%
!! TTTAACAAATCAAGTAATTA+AGG + chr1_4:57196880-57196899 Msa0172210:intron 15.0%
!!! AATAGATTTTTCAAATGAAT+AGG + chr1_4:57197459-57197478 Msa0172210:intron 15.0%
!! TAAAAAAAAAATCGAAGTAA+GGG - chr1_4:57198276-57198295 None:intergenic 15.0%
!! ATAAAAAAAAAATCGAAGTA+AGG - chr1_4:57198277-57198296 None:intergenic 15.0%
!! ATTATTCCATTTAATGTTAA+GGG - chr1_4:57198717-57198736 None:intergenic 15.0%
!! TATTATTCCATTTAATGTTA+AGG - chr1_4:57198718-57198737 None:intergenic 15.0%
!!! AAGATTATTTACTATTTTCT+TGG + chr1_4:57199536-57199555 Msa0172210:three_prime_UTR 15.0%
!!! CTAAAAAATTGTTTTAGAAG+AGG + chr1_4:57191080-57191099 Msa0172210:intron 20.0%
!! AAATATCAAAGTAATGAAAC+AGG - chr1_4:57191358-57191377 None:intergenic 20.0%
!!! TATTTATTTATGGTTTGCAT+TGG + chr1_4:57191877-57191896 Msa0172210:intron 20.0%
!! TTGGATGATTATTTATTTGA+AGG + chr1_4:57191896-57191915 Msa0172210:intron 20.0%
!!! ATAAAATAATGGAATACATC+CGG + chr1_4:57191958-57191977 Msa0172210:CDS 20.0%
!! ATAAGATGAAAATCCAAATT+CGG - chr1_4:57192052-57192071 None:intergenic 20.0%
!! TGAATATTTGCAATATGAAT+TGG + chr1_4:57192543-57192562 Msa0172210:CDS 20.0%
!! AAATATGCAATGGAATAAAA+AGG - chr1_4:57192807-57192826 None:intergenic 20.0%
!!! TTTGACTTAAATCATCAATT+TGG + chr1_4:57193089-57193108 Msa0172210:intron 20.0%
!!! AATTCTTGTTACTGTTTTAT+AGG + chr1_4:57193342-57193361 Msa0172210:intron 20.0%
!!! AAATTTAGTTTTTATGCTGT+CGG + chr1_4:57193495-57193514 Msa0172210:intron 20.0%
!! TGACTTTAATATATTGTTAG+AGG + chr1_4:57193867-57193886 Msa0172210:intron 20.0%
!! GAAAACATATGATTTATGAA+TGG - chr1_4:57193914-57193933 None:intergenic 20.0%
!! TCTCATTTATTCTGTTAAAA+TGG + chr1_4:57194177-57194196 Msa0172210:intron 20.0%
!! CTTCATCAAATTCTTATTAT+TGG + chr1_4:57194453-57194472 Msa0172210:intron 20.0%
!! AAATTCTTATTATTGGTAGA+TGG + chr1_4:57194460-57194479 Msa0172210:intron 20.0%
!! AATTCTTATTATTGGTAGAT+GGG + chr1_4:57194461-57194480 Msa0172210:intron 20.0%
!! ATTTGCCAGTATTATTATAA+CGG + chr1_4:57194632-57194651 Msa0172210:CDS 20.0%
!!! TTTTATTTATTATTGGGCAT+AGG + chr1_4:57194684-57194703 Msa0172210:intron 20.0%
!! CATAGGTTATATTTGTTTAT+TGG + chr1_4:57194701-57194720 Msa0172210:intron 20.0%
!!! TCTTTTTTTTATGATTGACT+TGG + chr1_4:57194729-57194748 Msa0172210:intron 20.0%
!! ATCCAGTATATATTATGTTT+AGG - chr1_4:57195435-57195454 None:intergenic 20.0%
!! GATTATTGATGTAAATTTCT+AGG + chr1_4:57195503-57195522 Msa0172210:intron 20.0%
!! ATAGAAAGAAAAATGAACAA+TGG - chr1_4:57195566-57195585 None:intergenic 20.0%
!!! GACTTTTATTTAATTTTTCC+AGG + chr1_4:57195590-57195609 Msa0172210:intron 20.0%
!! TTCTTATTCTGATATTTACA+TGG + chr1_4:57195945-57195964 Msa0172210:CDS 20.0%
!!! GATTTTTTAAACTAGTTTTG+GGG + chr1_4:57196082-57196101 Msa0172210:intron 20.0%
!! AATTTCTTCTCATCAATAAA+TGG - chr1_4:57196134-57196153 None:intergenic 20.0%
!!! GTTTTTGTTTTTCTTTTTAC+AGG + chr1_4:57196588-57196607 Msa0172210:intron 20.0%
!! AAAATAAACCAAGTTGTAAA+AGG - chr1_4:57196627-57196646 None:intergenic 20.0%
!! TTATCCTTTCATAAATTTGA+AGG - chr1_4:57197111-57197130 None:intergenic 20.0%
!!! GAATATTTTAATGTGAACTT+CGG + chr1_4:57197172-57197191 Msa0172210:intron 20.0%
!! TAAAATAAGCAAATAATCTC+TGG - chr1_4:57197227-57197246 None:intergenic 20.0%
!! AATATCTGTAATTATTTGAG+AGG + chr1_4:57197760-57197779 Msa0172210:intron 20.0%
!! ATTATTCATTTACCTAATTG+CGG + chr1_4:57198180-57198199 Msa0172210:intron 20.0%
!! AAAAAAAAAATCGAAGTAAG+GGG - chr1_4:57198275-57198294 None:intergenic 20.0%
!! TATTCATGAAAAATCAATGT+TGG + chr1_4:57198525-57198544 Msa0172210:intron 20.0%
!! ATTCATGAAAAATCAATGTT+GGG + chr1_4:57198526-57198545 Msa0172210:intron 20.0%
!!! AAAATTTTAGAACACAAGAT+AGG + chr1_4:57198927-57198946 Msa0172210:CDS 20.0%
! TTGCTTCATTCAATTCAATT+TGG - chr1_4:57189646-57189665 None:intergenic 25.0%
!! TATTTCTAATGTTAAACCCT+AGG + chr1_4:57190161-57190180 Msa0172210:intron 25.0%
! ATTTCTAATGTTAAACCCTA+GGG + chr1_4:57190162-57190181 Msa0172210:intron 25.0%
! CTTGTAATATAATATCCCTA+GGG - chr1_4:57190180-57190199 None:intergenic 25.0%
! ACTTGTAATATAATATCCCT+AGG - chr1_4:57190181-57190200 None:intergenic 25.0%
! TTTATCATCCAATTCAAGTA+CGG - chr1_4:57190292-57190311 None:intergenic 25.0%
! AAAACAACAACAAAAATCGA+TGG + chr1_4:57190329-57190348 Msa0172210:intron 25.0%
!! TTTAAAACACTGCATTAAAG+AGG + chr1_4:57190428-57190447 Msa0172210:intron 25.0%
! AAATCTTCTGCATTCAAATT+TGG + chr1_4:57190535-57190554 Msa0172210:intron 25.0%
! AATCTTCTGCATTCAAATTT+GGG + chr1_4:57190536-57190555 Msa0172210:intron 25.0%
! GTGGATAAAATATGGATAAA+TGG + chr1_4:57190626-57190645 Msa0172210:intron 25.0%
! AAACTCAAAAATTGTATTGG+AGG - chr1_4:57190796-57190815 None:intergenic 25.0%
!!! TTTTAGAAGAGGATTTTTGA+AGG + chr1_4:57191091-57191110 Msa0172210:intron 25.0%
! ATTACTTTGATATTTGCAGA+TGG + chr1_4:57191363-57191382 Msa0172210:intron 25.0%
!! TAGTACCTTTATATTTTTCC+AGG - chr1_4:57191722-57191741 None:intergenic 25.0%
!! TTTCTTTTCCCATATATATC+TGG + chr1_4:57191830-57191849 Msa0172210:intron 25.0%
! TACAAACAATGTTGAGTATT+CGG - chr1_4:57192011-57192030 None:intergenic 25.0%
! AATACTCAACATTGTTTGTA+TGG + chr1_4:57192011-57192030 Msa0172210:CDS 25.0%
! TAAGATGAAAATCCAAATTC+GGG - chr1_4:57192051-57192070 None:intergenic 25.0%
! AAAAATCAGTGAAAAAACCA+AGG - chr1_4:57192099-57192118 None:intergenic 25.0%
!!! GATTTTTTTATCTTTCAACC+AGG + chr1_4:57192112-57192131 Msa0172210:intron 25.0%
! TATTAGCTCATTGATATCAA+TGG + chr1_4:57192232-57192251 Msa0172210:intron 25.0%
! GATATTTCTTCTTGTGAATA+GGG - chr1_4:57192410-57192429 None:intergenic 25.0%
! TGATATTTCTTCTTGTGAAT+AGG - chr1_4:57192411-57192430 None:intergenic 25.0%
! TATTCACAAGAAGAAATATC+AGG + chr1_4:57192410-57192429 Msa0172210:CDS 25.0%
! AATACACTTTCTACTATTAC+AGG + chr1_4:57192861-57192880 Msa0172210:intron 25.0%
! ATACACTTTCTACTATTACA+GGG + chr1_4:57192862-57192881 Msa0172210:intron 25.0%
! ACTGATGCATATATATAGAA+AGG + chr1_4:57192897-57192916 Msa0172210:CDS 25.0%
!! AGGTATTTTGCTTTCTAATT+AGG + chr1_4:57193251-57193270 Msa0172210:intron 25.0%
! AGGTATTATGTTGAAAAGTT+TGG + chr1_4:57193709-57193728 Msa0172210:CDS 25.0%
!!! AGCTTTTTATTTGAAGAATG+GGG - chr1_4:57194028-57194047 None:intergenic 25.0%
!!! CAGCTTTTTATTTGAAGAAT+GGG - chr1_4:57194029-57194048 None:intergenic 25.0%
!!! TCAGCTTTTTATTTGAAGAA+TGG - chr1_4:57194030-57194049 None:intergenic 25.0%
! TATTTCACAAAATCCAATGT+AGG + chr1_4:57194418-57194437 Msa0172210:intron 25.0%
! ATTTCACAAAATCCAATGTA+GGG + chr1_4:57194419-57194438 Msa0172210:intron 25.0%
! ATACACCGTTATAATAATAC+TGG - chr1_4:57194640-57194659 None:intergenic 25.0%
! ACTGAGTATGAGATTAAAAA+TGG - chr1_4:57194830-57194849 None:intergenic 25.0%
!! CTTAAAGTATCCTAGTATAA+TGG + chr1_4:57194945-57194964 Msa0172210:intron 25.0%
! CTCCTAAACATAATATATAC+TGG + chr1_4:57195430-57195449 Msa0172210:intron 25.0%
! TCAATAATCTAAAAGCAACT+CGG - chr1_4:57195492-57195511 None:intergenic 25.0%
! AATCTCAAAATCTGTCAAAA+AGG - chr1_4:57195974-57195993 None:intergenic 25.0%
!!! GATTTTGAGATTGATATGAA+TGG + chr1_4:57195982-57196001 Msa0172210:CDS 25.0%
! AAACGTCTAAAAAAAAACCT+CGG - chr1_4:57196567-57196586 None:intergenic 25.0%
!! TGTTTTCCATCAAGTAATTA+AGG + chr1_4:57196851-57196870 Msa0172210:intron 25.0%
! AAAACACCTTAATTACTTGA+TGG - chr1_4:57196860-57196879 None:intergenic 25.0%
! ATGCATACACATGAATTTAT+AGG + chr1_4:57196923-57196942 Msa0172210:intron 25.0%
!!! TATATGTCGATTTGTGAATT+TGG + chr1_4:57196950-57196969 Msa0172210:intron 25.0%
! AGTTCACATTAAAATATTCC+TGG - chr1_4:57197171-57197190 None:intergenic 25.0%
!! TTACTGTATTACCAAGTTTT+TGG + chr1_4:57197656-57197675 Msa0172210:CDS 25.0%
!!! ACCTAGTATTTTAAATTCCT+TGG + chr1_4:57197950-57197969 Msa0172210:intron 25.0%
!! ACCAAGGAATTTAAAATACT+AGG - chr1_4:57197954-57197973 None:intergenic 25.0%
!!! TAGTATTTTAAATTCCTTGG+TGG + chr1_4:57197953-57197972 Msa0172210:intron 25.0%
! AAAAAAAAATCGAAGTAAGG+GGG - chr1_4:57198274-57198293 None:intergenic 25.0%
! TTTAATGTTCCATGTGAAAA+TGG + chr1_4:57198420-57198439 Msa0172210:intron 25.0%
! TTCATGAAAAATCAATGTTG+GGG + chr1_4:57198527-57198546 Msa0172210:intron 25.0%
! GAAATGTTAAAGATTTAGCT+GGG + chr1_4:57199761-57199780 Msa0172210:three_prime_UTR 25.0%
AGACAACCACTTTGATAAAT+CGG - chr1_4:57189579-57189598 None:intergenic 30.0%
AACTTGTACTTGGATATGAA+CGG + chr1_4:57189842-57189861 Msa0172210:CDS 30.0%
AAAACTTCATCATAAGTAGC+TGG - chr1_4:57189997-57190016 None:intergenic 30.0%
!! CAATGTTTTAAATACCAGAC+CGG + chr1_4:57190237-57190256 Msa0172210:intron 30.0%
!! CTACAATGTTTTTGTCCTTA+AGG + chr1_4:57190563-57190582 Msa0172210:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG - chr1_4:57190792-57190811 None:intergenic 30.0%
GGGAAACTCAAAAATTGTAT+TGG - chr1_4:57190799-57190818 None:intergenic 30.0%
AGAAATAGATGACATTGAGA+GGG - chr1_4:57190872-57190891 None:intergenic 30.0%
AAGAAATAGATGACATTGAG+AGG - chr1_4:57190873-57190892 None:intergenic 30.0%
AAAAAGGAAGGAAGAAATAG+AGG + chr1_4:57190988-57191007 Msa0172210:intron 30.0%
AAAAGGAAGGAAGAAATAGA+GGG + chr1_4:57190989-57191008 Msa0172210:intron 30.0%
AACATAAAATCCCCCTAATT+TGG + chr1_4:57191052-57191071 Msa0172210:intron 30.0%
ACATAAAATCCCCCTAATTT+GGG + chr1_4:57191053-57191072 Msa0172210:intron 30.0%
TTAATATGCTCATGCTTTCA+AGG + chr1_4:57191468-57191487 Msa0172210:intron 30.0%
ATGCCATAAATTTAGTACCA+GGG - chr1_4:57191645-57191664 None:intergenic 30.0%
TGAGGGAGAACATAAAATAA+TGG + chr1_4:57191947-57191966 Msa0172210:CDS 30.0%
TCAACATTGTTTGTATGGAT+TGG + chr1_4:57192016-57192035 Msa0172210:CDS 30.0%
AAGAAGAAATATCAGGTTTG+AGG + chr1_4:57192417-57192436 Msa0172210:intron 30.0%
AAGTACAGTTTAGTGTAACA+TGG - chr1_4:57192706-57192725 None:intergenic 30.0%
TACAACATTGACAATTAGGT+AGG - chr1_4:57192835-57192854 None:intergenic 30.0%
TGAGTACAACATTGACAATT+AGG - chr1_4:57192839-57192858 None:intergenic 30.0%
ACAAACAAAAAGATGAACAC+AGG - chr1_4:57192980-57192999 None:intergenic 30.0%
TGAATATCTTAATGTCTTCC+AGG + chr1_4:57193144-57193163 Msa0172210:intron 30.0%
! TCTTGTTACTGTTTTATAGG+TGG + chr1_4:57193345-57193364 Msa0172210:intron 30.0%
ATCCAGAAAAATTATTCTGG+TGG - chr1_4:57193545-57193564 None:intergenic 30.0%
GCAATCCAGAAAAATTATTC+TGG - chr1_4:57193548-57193567 None:intergenic 30.0%
TTCATTATGAAAACTTTGCC+AGG - chr1_4:57193636-57193655 None:intergenic 30.0%
!!! TGCATGTTTCTTATTTTCTC+AGG + chr1_4:57193657-57193676 Msa0172210:intron 30.0%
! TTATTTTCTCAGGTCAAGTT+AGG + chr1_4:57193667-57193686 Msa0172210:intron 30.0%
! TATTTTCTCAGGTCAAGTTA+GGG + chr1_4:57193668-57193687 Msa0172210:intron 30.0%
GAACAGCAAATAATTTGACA+AGG - chr1_4:57193816-57193835 None:intergenic 30.0%
!! GTCAAATTATTTGCTGTTCT+TGG + chr1_4:57193817-57193836 Msa0172210:intron 30.0%
!! TTTTTATTTGAAGAATGGGG+CGG - chr1_4:57194025-57194044 None:intergenic 30.0%
!! TCTCATTAATTTCTGGCTAT+TGG + chr1_4:57194533-57194552 Msa0172210:intron 30.0%
CACATATTTCAAAACCTACA+AGG - chr1_4:57194597-57194616 None:intergenic 30.0%
!!! CTTGTAGGTTTTGAAATATG+TGG + chr1_4:57194595-57194614 Msa0172210:intron 30.0%
!!! TAGGTTTTGAAATATGTGGA+AGG + chr1_4:57194599-57194618 Msa0172210:intron 30.0%
!! TTATGATTGACTTGGTAGAA+TGG + chr1_4:57194737-57194756 Msa0172210:intron 30.0%
!! AGTATCCTAGTATAATGGAT+AGG + chr1_4:57194950-57194969 Msa0172210:intron 30.0%
! TAATGGATAGGCATGTATTA+AGG + chr1_4:57194962-57194981 Msa0172210:intron 30.0%
! TGATAAGTAATGCTTCCTTT+TGG + chr1_4:57195004-57195023 Msa0172210:intron 30.0%
! TTTTCATAAACTCGTCCAAA+AGG - chr1_4:57195022-57195041 None:intergenic 30.0%
TGAAAAGATGGAACTGATAA+AGG + chr1_4:57195036-57195055 Msa0172210:intron 30.0%
ATAAAGGAGTTAGGATAAAG+AGG + chr1_4:57195052-57195071 Msa0172210:intron 30.0%
TAAAGGAGTTAGGATAAAGA+GGG + chr1_4:57195053-57195072 Msa0172210:intron 30.0%
! ATTCCTCCTTTTAATAGCTT+TGG - chr1_4:57195143-57195162 None:intergenic 30.0%
AGGAGGAATTAAACAAAGAA+AGG + chr1_4:57195154-57195173 Msa0172210:intron 30.0%
!!! AGATTTCTGGAGTTGTTTTA+CGG + chr1_4:57195186-57195205 Msa0172210:intron 30.0%
AAATGAACAATGGTCATGTA+TGG - chr1_4:57195556-57195575 None:intergenic 30.0%
!! TCTTTAAGATCAGAAGCAAA+AGG - chr1_4:57195637-57195656 None:intergenic 30.0%
!!! CTAGAAATAATTTTTTCCCC+TGG + chr1_4:57195667-57195686 Msa0172210:CDS 30.0%
AAACCATTTGATCAGCTTAT+GGG + chr1_4:57195700-57195719 Msa0172210:CDS 30.0%
TAGATCTAAGAACATGATAG+AGG - chr1_4:57195750-57195769 None:intergenic 30.0%
ATCAAATCCCTATATTTGTC+AGG - chr1_4:57195835-57195854 None:intergenic 30.0%
AAAAATAGGTGATGAAGGAT+CGG - chr1_4:57195860-57195879 None:intergenic 30.0%
AAGTGAAAAATAGGTGATGA+AGG - chr1_4:57195865-57195884 None:intergenic 30.0%
CTCATCAATAAATGGCAATT+TGG - chr1_4:57196126-57196145 None:intergenic 30.0%
!!! AAGTTTTATTTGTGTGTGGA+AGG + chr1_4:57196193-57196212 Msa0172210:intron 30.0%
!!! AGTTTTATTTGTGTGTGGAA+GGG + chr1_4:57196194-57196213 Msa0172210:intron 30.0%
!!! ACAACGTCGTTTTAAGAAAA+GGG - chr1_4:57196439-57196458 None:intergenic 30.0%
! TTTTCACGTGTTGTATTGTA+GGG - chr1_4:57196473-57196492 None:intergenic 30.0%
!!! GAGGTTTTTTTTTAGACGTT+TGG + chr1_4:57196566-57196585 Msa0172210:intron 30.0%
! ATTCTTCTCCTTTTACAACT+TGG + chr1_4:57196616-57196635 Msa0172210:intron 30.0%
! AATTTGAAGGCCAACAATTT+TGG - chr1_4:57197098-57197117 None:intergenic 30.0%
! TTGGCCTTCAAATTTATGAA+AGG + chr1_4:57197104-57197123 Msa0172210:intron 30.0%
TCACATTAAAATATTCCTGG+TGG - chr1_4:57197168-57197187 None:intergenic 30.0%
ACAGAGCAATAATTAACACT+TGG - chr1_4:57197385-57197404 None:intergenic 30.0%
!!! TTGCTCTGTTGTATTTTTTC+TGG + chr1_4:57197396-57197415 Msa0172210:intron 30.0%
!! ATTTCTGTTTTGTTAGATGC+AGG + chr1_4:57197556-57197575 Msa0172210:intron 30.0%
! TGTTATTTATTAGCAGTGGT+GGG + chr1_4:57197807-57197826 Msa0172210:intron 30.0%
!! TATTTTAAATTCCTTGGTGG+AGG + chr1_4:57197956-57197975 Msa0172210:intron 30.0%
GAACATTAAACTTAACCATC+AGG - chr1_4:57198410-57198429 None:intergenic 30.0%
CATCACATACACAAAAGTAA+GGG - chr1_4:57198616-57198635 None:intergenic 30.0%
AGAACACCCTTAACATTAAA+TGG + chr1_4:57198708-57198727 Msa0172210:CDS 30.0%
AAATGGAATAATACATCCCA+CGG + chr1_4:57198725-57198744 Msa0172210:CDS 30.0%
! GAATATTTTCCATATCCAGA+TGG - chr1_4:57198806-57198825 None:intergenic 30.0%
TCTGGATATGGAAAATATTC+TGG + chr1_4:57198806-57198825 Msa0172210:CDS 30.0%
GAGAACACTAACAGTTATTA+TGG + chr1_4:57198830-57198849 Msa0172210:CDS 30.0%
TGCTTTAGTATTCCACTTTA+GGG - chr1_4:57199110-57199129 None:intergenic 30.0%
! AATACTAAAGCACCTGTAAA+TGG + chr1_4:57199118-57199137 Msa0172210:CDS 30.0%
TTCTTTATCTGCTTATGATG+AGG - chr1_4:57199184-57199203 None:intergenic 30.0%
TCATCATAAGCAGATAAAGA+AGG + chr1_4:57199183-57199202 Msa0172210:CDS 30.0%
TAGTTGCATAACCAATAACA+GGG + chr1_4:57199354-57199373 Msa0172210:three_prime_UTR 30.0%
CTTTCAAATGAATCACATCA+GGG - chr1_4:57199393-57199412 None:intergenic 30.0%
TCTTTCAAATGAATCACATC+AGG - chr1_4:57199394-57199413 None:intergenic 30.0%
! TTTTACATCTTTCTAAACCC+TGG - chr1_4:57199511-57199530 None:intergenic 30.0%
! TTCTTGGATTAGAATGTAAC+TGG + chr1_4:57199552-57199571 Msa0172210:three_prime_UTR 30.0%
GGAAATGTTAAAGATTTAGC+TGG + chr1_4:57199760-57199779 Msa0172210:three_prime_UTR 30.0%
TTCTGCATTGTATGTTTGAA+AGG + chr1_4:57199817-57199836 Msa0172210:three_prime_UTR 30.0%
! TGATAAATCGGAGGAGTATA+CGG - chr1_4:57189567-57189586 None:intergenic 35.0%
! ATTAATGAATGAGAGCGTGA+TGG + chr1_4:57189601-57189620 Msa0172210:five_prime_UTR 35.0%
TTATCGAACTCAATTCCGTT+GGG - chr1_4:57189824-57189843 None:intergenic 35.0%
! TGAGTTCGATAACTTGTACT+TGG + chr1_4:57189832-57189851 Msa0172210:CDS 35.0%
! TGTTGATCATCTCTTTTCCT+TGG + chr1_4:57190035-57190054 Msa0172210:CDS 35.0%
ATTAACATCACTCGTTGTAG+TGG + chr1_4:57190133-57190152 Msa0172210:intron 35.0%
TTGTTCAACCGTACTTGAAT+TGG + chr1_4:57190281-57190300 Msa0172210:intron 35.0%
!! TTTTAAAAACCAGACGGAAC+CGG - chr1_4:57190415-57190434 None:intergenic 35.0%
!!! GCAGTGTTTTAAAAACCAGA+CGG - chr1_4:57190421-57190440 None:intergenic 35.0%
AAAACACTGCATTAAAGAGG+TGG + chr1_4:57190431-57190450 Msa0172210:intron 35.0%
AAACACTGCATTAAAGAGGT+GGG + chr1_4:57190432-57190451 Msa0172210:intron 35.0%
TTGACAAACATCCACCAATT+GGG + chr1_4:57190455-57190474 Msa0172210:intron 35.0%
!!! AAATGTTTTGGGATCCCAAT+TGG - chr1_4:57190472-57190491 None:intergenic 35.0%
!! TTTGTCCTTAAGGCTTTGTT+TGG + chr1_4:57190573-57190592 Msa0172210:intron 35.0%
!! TTGTCCTTAAGGCTTTGTTT+GGG + chr1_4:57190574-57190593 Msa0172210:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr1_4:57190793-57190812 None:intergenic 35.0%
!!! TTTTTGAGTTTCCCCAAATG+AGG + chr1_4:57190805-57190824 Msa0172210:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - chr1_4:57190871-57190890 None:intergenic 35.0%
!! AGGGCTTTGAAAAAAAAGGA+AGG + chr1_4:57190976-57190995 Msa0172210:intron 35.0%
! AAGGAAGAAATAGAGGGTTT+TGG + chr1_4:57190995-57191014 Msa0172210:intron 35.0%
CATAAAATCCCCCTAATTTG+GGG + chr1_4:57191054-57191073 Msa0172210:intron 35.0%
ATAAAATCCCCCTAATTTGG+GGG + chr1_4:57191055-57191074 Msa0172210:intron 35.0%
!!! TTTTTAGCTCCCCCAAATTA+GGG - chr1_4:57191067-57191086 None:intergenic 35.0%
!!! TTTTTTAGCTCCCCCAAATT+AGG - chr1_4:57191068-57191087 None:intergenic 35.0%
AAGACTCTTAGACTCTGTTT+GGG - chr1_4:57191253-57191272 None:intergenic 35.0%
TAAGACTCTTAGACTCTGTT+TGG - chr1_4:57191254-57191273 None:intergenic 35.0%
! GACAGTGAGATTTTATGCTA+TGG - chr1_4:57191280-57191299 None:intergenic 35.0%
TGACAAGGAACATGTAAAGA+CGG - chr1_4:57191302-57191321 None:intergenic 35.0%
CAAGAAAAGTAAGTGTGACA+AGG - chr1_4:57191317-57191336 None:intergenic 35.0%
ACAGGATACAAAAGCTACAA+GGG - chr1_4:57191340-57191359 None:intergenic 35.0%
AACAGGATACAAAAGCTACA+AGG - chr1_4:57191341-57191360 None:intergenic 35.0%
!!! TTCTCGTACTTTTTTGCTGA+AGG + chr1_4:57191491-57191510 Msa0172210:intron 35.0%
TACCCCTGGTACTAAATTTA+TGG + chr1_4:57191639-57191658 Msa0172210:CDS 35.0%
TGCCATAAATTTAGTACCAG+GGG - chr1_4:57191644-57191663 None:intergenic 35.0%
GATGCCATAAATTTAGTACC+AGG - chr1_4:57191646-57191665 None:intergenic 35.0%
! CCTTTATATTTTTCCAGGCA+GGG - chr1_4:57191717-57191736 None:intergenic 35.0%
! ACCTTTATATTTTTCCAGGC+AGG - chr1_4:57191718-57191737 None:intergenic 35.0%
AAGCGGCATAAACAATAGAT+AGG - chr1_4:57191760-57191779 None:intergenic 35.0%
CCTGAAAGCCAGATATATAT+GGG - chr1_4:57191841-57191860 None:intergenic 35.0%
TCCTGAAAGCCAGATATATA+TGG - chr1_4:57191842-57191861 None:intergenic 35.0%
!!! TGCTGATTTTATCCTTTCCT+TGG + chr1_4:57192079-57192098 Msa0172210:intron 35.0%
TCAGTGAAAAAACCAAGGAA+AGG - chr1_4:57192094-57192113 None:intergenic 35.0%
AGGTTCACTTCTCAATATTG+AGG + chr1_4:57192171-57192190 Msa0172210:CDS 35.0%
GGTTCACTTCTCAATATTGA+GGG + chr1_4:57192172-57192191 Msa0172210:CDS 35.0%
CATCTTGACAATTCACACAT+TGG - chr1_4:57192208-57192227 None:intergenic 35.0%
TCAAATGATCAATCACCTGA+TGG + chr1_4:57192261-57192280 Msa0172210:intron 35.0%
AAAGTAATTACCTGTCCATC+AGG - chr1_4:57192279-57192298 None:intergenic 35.0%
ACAAAACACTTATCTTGTCC+AGG - chr1_4:57192303-57192322 None:intergenic 35.0%
! CAAGATAAGTGTTTTGTGTG+TGG + chr1_4:57192306-57192325 Msa0172210:CDS 35.0%
GAAATATCAGGTTTGAGGAT+TGG + chr1_4:57192422-57192441 Msa0172210:intron 35.0%
ATTCACAGTTTCTGAACATC+TGG + chr1_4:57192512-57192531 Msa0172210:CDS 35.0%
TTCACAGTTTCTGAACATCT+GGG + chr1_4:57192513-57192532 Msa0172210:CDS 35.0%
CAAAGTCAATCTCAAAAGGA+GGG - chr1_4:57192579-57192598 None:intergenic 35.0%
TCAAAGTCAATCTCAAAAGG+AGG - chr1_4:57192580-57192599 None:intergenic 35.0%
CGTTCAAAGTCAATCTCAAA+AGG - chr1_4:57192583-57192602 None:intergenic 35.0%
! GTATTTCTGTGCTTCTTTGT+CGG + chr1_4:57192619-57192638 Msa0172210:CDS 35.0%
ATCTCTAATGTTGGCATATG+AGG - chr1_4:57192658-57192677 None:intergenic 35.0%
GTAGGAAGACAAATATGCAA+TGG - chr1_4:57192817-57192836 None:intergenic 35.0%
ATAAGTAAGATAACCACCCA+TGG - chr1_4:57192932-57192951 None:intergenic 35.0%
CAGTTGCTTATACTGTACTT+TGG + chr1_4:57193065-57193084 Msa0172210:intron 35.0%
CTACTCTATCTAAGAAAACC+TGG - chr1_4:57193165-57193184 None:intergenic 35.0%
GATTTGATCTTCATGAACAG+CGG - chr1_4:57193206-57193225 None:intergenic 35.0%
GGTTTGTAAACTGATATGCA+TGG + chr1_4:57193272-57193291 Msa0172210:intron 35.0%
ATAATGAAGAGATGAGAGCT+AGG + chr1_4:57193374-57193393 Msa0172210:CDS 35.0%
TAATGAAGAGATGAGAGCTA+GGG + chr1_4:57193375-57193394 Msa0172210:CDS 35.0%
CTGAACCTTATCAGAAAATG+AGG - chr1_4:57193431-57193450 None:intergenic 35.0%
! CTCCACCAGAATAATTTTTC+TGG + chr1_4:57193540-57193559 Msa0172210:intron 35.0%
GATTGCCAAAGTAATTCTAC+TGG + chr1_4:57193562-57193581 Msa0172210:intron 35.0%
GAACACCAGTAGAATTACTT+TGG - chr1_4:57193570-57193589 None:intergenic 35.0%
CATAAGCAATCTAGAAATCC+TGG + chr1_4:57193615-57193634 Msa0172210:intron 35.0%
! ATTTTCTCAGGTCAAGTTAG+GGG + chr1_4:57193669-57193688 Msa0172210:intron 35.0%
TAATACCTTTCCTTGTATCC+AGG - chr1_4:57193697-57193716 None:intergenic 35.0%
TACATTGCATGCTTGTATGT+TGG + chr1_4:57193842-57193861 Msa0172210:intron 35.0%
CTCAAAAAGCTGACGTTATT+AGG - chr1_4:57193938-57193957 None:intergenic 35.0%
GGCTCTTTAGATTAGAAGTT+TGG - chr1_4:57194070-57194089 None:intergenic 35.0%
ATCATCTACCATAAAAGCTC+AGG - chr1_4:57194156-57194175 None:intergenic 35.0%
ACGAAGATGTTGTCATTGTA+TGG + chr1_4:57194325-57194344 Msa0172210:intron 35.0%
CGAAGATGTTGTCATTGTAT+GGG + chr1_4:57194326-57194345 Msa0172210:intron 35.0%
! ACCTAATGACAACTTTTTGC+TGG + chr1_4:57194390-57194409 Msa0172210:intron 35.0%
TCCAGCAAAAAGTTGTCATT+AGG - chr1_4:57194394-57194413 None:intergenic 35.0%
AGAAATTAATGAGAACGAGC+AGG - chr1_4:57194527-57194546 None:intergenic 35.0%
TGCTCGTTCTCATTAATTTC+TGG + chr1_4:57194526-57194545 Msa0172210:intron 35.0%
! ATTGTCTTTGTTGTCCTTGT+AGG + chr1_4:57194580-57194599 Msa0172210:intron 35.0%
AATACTGGCAAATCCAACAA+AGG - chr1_4:57194625-57194644 None:intergenic 35.0%
ATTATAACGGTGTATGCTCA+TGG + chr1_4:57194645-57194664 Msa0172210:CDS 35.0%
TCCAGTTTAACTGAGTAGTT+GGG - chr1_4:57194895-57194914 None:intergenic 35.0%
ATCCAGTTTAACTGAGTAGT+TGG - chr1_4:57194896-57194915 None:intergenic 35.0%
ACATGCCTATCCATTATACT+AGG - chr1_4:57194958-57194977 None:intergenic 35.0%
TGGACGAGTTTATGAAAAGA+TGG + chr1_4:57195024-57195043 Msa0172210:intron 35.0%
ATGGAACTGATAAAGGAGTT+AGG + chr1_4:57195043-57195062 Msa0172210:intron 35.0%
AAAGGAGTTAGGATAAAGAG+GGG + chr1_4:57195054-57195073 Msa0172210:intron 35.0%
TGTCAACAGTTAGTTAACAG+AGG + chr1_4:57195110-57195129 Msa0172210:intron 35.0%
ACAGTTAGTTAACAGAGGTT+TGG + chr1_4:57195115-57195134 Msa0172210:intron 35.0%
CAGTTAGTTAACAGAGGTTT+GGG + chr1_4:57195116-57195135 Msa0172210:intron 35.0%
TTGGGACCAAAGCTATTAAA+AGG + chr1_4:57195134-57195153 Msa0172210:intron 35.0%
ATACTCGAAACCTAGGTAAT+TGG - chr1_4:57195231-57195250 None:intergenic 35.0%
TGGCAATTCAACTAAAACGA+AGG - chr1_4:57195536-57195555 None:intergenic 35.0%
! CAAAAGGAGCATAATGATAC+GGG - chr1_4:57195621-57195640 None:intergenic 35.0%
! GCAAAAGGAGCATAATGATA+CGG - chr1_4:57195622-57195641 None:intergenic 35.0%
AGCTGATCAAATGGTTTGAA+TGG - chr1_4:57195697-57195716 None:intergenic 35.0%
CAAACCATTTGATCAGCTTA+TGG + chr1_4:57195699-57195718 Msa0172210:CDS 35.0%
AACCATTTGATCAGCTTATG+GGG + chr1_4:57195701-57195720 Msa0172210:CDS 35.0%
TGAATGGAAAACGATTTGCA+TGG + chr1_4:57195998-57196017 Msa0172210:CDS 35.0%
!!! TAGTTTTGGGGATTCTTTTC+AGG + chr1_4:57196094-57196113 Msa0172210:intron 35.0%
!!! AGTTTTGGGGATTCTTTTCA+GGG + chr1_4:57196095-57196114 Msa0172210:intron 35.0%
GAAGCTTGAAGACACATTAA+CGG + chr1_4:57196169-57196188 Msa0172210:CDS 35.0%
!!! CGGTAAGTTTTATTTGTGTG+TGG + chr1_4:57196189-57196208 Msa0172210:intron 35.0%
!!! CAACGTCGTTTTAAGAAAAG+GGG - chr1_4:57196438-57196457 None:intergenic 35.0%
!!! CACAACGTCGTTTTAAGAAA+AGG - chr1_4:57196440-57196459 None:intergenic 35.0%
! CTTTTCACGTGTTGTATTGT+AGG - chr1_4:57196474-57196493 None:intergenic 35.0%
GAGGTTACAAGATCGTAAAT+CGG - chr1_4:57197005-57197024 None:intergenic 35.0%
!!! ATTTTGACTACCTTGGAAGA+GGG + chr1_4:57197049-57197068 Msa0172210:intron 35.0%
AACCAGTCATCCAAAATTGT+TGG + chr1_4:57197085-57197104 Msa0172210:intron 35.0%
TCAAAAAATGAGTTGCCTGA+AGG + chr1_4:57197261-57197280 Msa0172210:intron 35.0%
TGAAACACATCTTTCATGAG+TGG - chr1_4:57197690-57197709 None:intergenic 35.0%
AACCTAGCATTTGCGTTAAT+TGG - chr1_4:57197713-57197732 None:intergenic 35.0%
AATTAACGCAAATGCTAGGT+TGG + chr1_4:57197712-57197731 Msa0172210:intron 35.0%
! TCGCTGTTATTTATTAGCAG+TGG + chr1_4:57197803-57197822 Msa0172210:intron 35.0%
! CTGTTATTTATTAGCAGTGG+TGG + chr1_4:57197806-57197825 Msa0172210:intron 35.0%
TGGGATGAATGGATATCTTT+GGG + chr1_4:57197826-57197845 Msa0172210:CDS 35.0%
ATATCTGGCAATCCATCAAT+GGG - chr1_4:57197890-57197909 None:intergenic 35.0%
ACTTGATTACTCTCGATATC+TGG - chr1_4:57197905-57197924 None:intergenic 35.0%
TATCTCAATCCTTGTAGACA+TGG + chr1_4:57198017-57198036 Msa0172210:CDS 35.0%
! CAGCATATGCAAACCTTTTT+GGG - chr1_4:57198077-57198096 None:intergenic 35.0%
! TCAGCATATGCAAACCTTTT+TGG - chr1_4:57198078-57198097 None:intergenic 35.0%
TGAACCAATAAACCTTAAGC+AGG - chr1_4:57198114-57198133 None:intergenic 35.0%
CAGTTACAACTTCATCTACT+GGG - chr1_4:57198151-57198170 None:intergenic 35.0%
ACAGTTACAACTTCATCTAC+TGG - chr1_4:57198152-57198171 None:intergenic 35.0%
ATAATACAACTGATCCAGGA+AGG - chr1_4:57198246-57198265 None:intergenic 35.0%
CTGTATAATACAACTGATCC+AGG - chr1_4:57198250-57198269 None:intergenic 35.0%
TAGAACTATGTGATACCTGA+TGG + chr1_4:57198392-57198411 Msa0172210:intron 35.0%
! ATATTGGCACCATTTTCACA+TGG - chr1_4:57198432-57198451 None:intergenic 35.0%
CAGATGACTACGACTTATAT+TGG - chr1_4:57198448-57198467 None:intergenic 35.0%
ATGCTAGCACTTCTCTATTA+TGG - chr1_4:57198474-57198493 None:intergenic 35.0%
ATGAAAAATCAATGTTGGGG+AGG + chr1_4:57198530-57198549 Msa0172210:intron 35.0%
GCATCACATACACAAAAGTA+AGG - chr1_4:57198617-57198636 None:intergenic 35.0%
GCAATAACTGGATCTCAATT+AGG + chr1_4:57198662-57198681 Msa0172210:CDS 35.0%
!! ATTGGAACCTGTTTGTTGTA+TGG - chr1_4:57198775-57198794 None:intergenic 35.0%
TATGGAGAACATAATCACCA+TGG + chr1_4:57198848-57198867 Msa0172210:CDS 35.0%
AGTTCCAAAATGTGAAGACT+GGG + chr1_4:57198966-57198985 Msa0172210:CDS 35.0%
! AAAACCCAGTCTTCACATTT+TGG - chr1_4:57198973-57198992 None:intergenic 35.0%
! TGGGTTTTCTGCTTTAACAA+TGG + chr1_4:57198985-57199004 Msa0172210:CDS 35.0%
! GTTTTCTGCTTTAACAATGG+AGG + chr1_4:57198988-57199007 Msa0172210:CDS 35.0%
GCTTTAGTATTCCACTTTAG+GGG - chr1_4:57199109-57199128 None:intergenic 35.0%
GTGCTTTAGTATTCCACTTT+AGG - chr1_4:57199111-57199130 None:intergenic 35.0%
CTAGGATACATTCCATTTAC+AGG - chr1_4:57199133-57199152 None:intergenic 35.0%
CTGTAAATGGAATGTATCCT+AGG + chr1_4:57199131-57199150 Msa0172210:CDS 35.0%
! CACTATTGATTACCAGAATC+TGG - chr1_4:57199244-57199263 None:intergenic 35.0%
CAGATTCTGGTAATCAATAG+TGG + chr1_4:57199242-57199261 Msa0172210:CDS 35.0%
ATTCTGGTAATCAATAGTGG+TGG + chr1_4:57199245-57199264 Msa0172210:exon 35.0%
TAATCAATAGTGGTGGTTGT+GGG + chr1_4:57199252-57199271 Msa0172210:exon 35.0%
! CTGTTATTGGTTATGCAACT+AGG - chr1_4:57199355-57199374 None:intergenic 35.0%
CTAGTTGCATAACCAATAAC+AGG + chr1_4:57199353-57199372 Msa0172210:three_prime_UTR 35.0%
AGTTGCATAACCAATAACAG+GGG + chr1_4:57199355-57199374 Msa0172210:three_prime_UTR 35.0%
!! TGATTTGCATTGGTTTGACA+TGG + chr1_4:57199467-57199486 Msa0172210:three_prime_UTR 35.0%
GAACATCAAATTGTGGGTAT+AGG + chr1_4:57199589-57199608 Msa0172210:three_prime_UTR 35.0%
GTATAGGAATTTAGCGCAAT+TGG + chr1_4:57199605-57199624 Msa0172210:three_prime_UTR 35.0%
TAGAATTTGACAAGCGTAGT+AGG + chr1_4:57199738-57199757 Msa0172210:three_prime_UTR 35.0%
AGAATTTGACAAGCGTAGTA+GGG + chr1_4:57199739-57199758 Msa0172210:three_prime_UTR 35.0%
GTTAAAGATTTAGCTGGGAT+TGG + chr1_4:57199766-57199785 Msa0172210:three_prime_UTR 35.0%
CATACAATGCAGAATACAGA+TGG - chr1_4:57199811-57199830 None:intergenic 35.0%
ACTCCTCCGATTTATCAAAG+TGG + chr1_4:57189570-57189589 Msa0172210:five_prime_UTR 40.0%
CAACCACTTTGATAAATCGG+AGG - chr1_4:57189576-57189595 None:intergenic 40.0%
AACTCAATTCCGTTGGGATT+GGG - chr1_4:57189818-57189837 None:intergenic 40.0%
GTTATCGAACTCAATTCCGT+TGG - chr1_4:57189825-57189844 None:intergenic 40.0%
TAGTACAAACCTTGCCATCA+GGG - chr1_4:57189889-57189908 None:intergenic 40.0%
AAGCTTCTTTACCTTGCAAC+TGG + chr1_4:57190069-57190088 Msa0172210:CDS 40.0%
AGTCATACATACCAGTTGCA+AGG - chr1_4:57190083-57190102 None:intergenic 40.0%
CAAGTTAAACCATGACCCAA+AGG - chr1_4:57190264-57190283 None:intergenic 40.0%
ACAATGGAGATCAAACCAAC+CGG + chr1_4:57190365-57190384 Msa0172210:intron 40.0%
GTTGACAAACATCCACCAAT+TGG + chr1_4:57190454-57190473 Msa0172210:intron 40.0%
AACTCCCAAACAAAGCCTTA+AGG - chr1_4:57190581-57190600 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr1_4:57190581-57190600 Msa0172210:intron 40.0%
! CTTTGGGGGTGGATAAAATA+TGG + chr1_4:57190618-57190637 Msa0172210:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_4:57190786-57190805 None:intergenic 40.0%
ATACAAACCCACCTCATTTG+GGG - chr1_4:57190819-57190838 None:intergenic 40.0%
GATACAAACCCACCTCATTT+GGG - chr1_4:57190820-57190839 None:intergenic 40.0%
TGATACAAACCCACCTCATT+TGG - chr1_4:57190821-57190840 None:intergenic 40.0%
AAGGGTTTGGCAAAAAAGGA+AGG - chr1_4:57190905-57190924 None:intergenic 40.0%
!!! GAAATAGAGGGTTTTGGAAG+AGG + chr1_4:57191001-57191020 Msa0172210:intron 40.0%
!!! TTTTAGCTCCCCCAAATTAG+GGG - chr1_4:57191066-57191085 None:intergenic 40.0%
!! AGAGGATTTTTGAAGGTCTG+TGG + chr1_4:57191098-57191117 Msa0172210:intron 40.0%
!! GAGGATTTTTGAAGGTCTGT+GGG + chr1_4:57191099-57191118 Msa0172210:intron 40.0%
CAAAATCCCTCTCTCAGAAA+AGG + chr1_4:57191168-57191187 Msa0172210:intron 40.0%
!! CTTTCACCTTTTCTGAGAGA+GGG - chr1_4:57191177-57191196 None:intergenic 40.0%
TTAGACTCTGTTTGGGAGTT+TGG - chr1_4:57191246-57191265 None:intergenic 40.0%
!!! TGCTGATTCATTTTGGCTCT+TGG - chr1_4:57191396-57191415 None:intergenic 40.0%
!!! GGAACGTTGCTGATTCATTT+TGG - chr1_4:57191403-57191422 None:intergenic 40.0%
AAATGAATCAGCAACGTTCC+CGG + chr1_4:57191403-57191422 Msa0172210:CDS 40.0%
TGCTCATGTGTAAGCATTAC+AGG + chr1_4:57191522-57191541 Msa0172210:intron 40.0%
! ACATTTGAGTCTGAAGTCTC+AGG - chr1_4:57191616-57191635 None:intergenic 40.0%
ATTTATGGCATCTCTGTCAG+TGG + chr1_4:57191654-57191673 Msa0172210:CDS 40.0%
CCCTGCCTGGAAAAATATAA+AGG + chr1_4:57191714-57191733 Msa0172210:CDS 40.0%
AGGAATCATCCCAACTTGAA+AGG - chr1_4:57191786-57191805 None:intergenic 40.0%
TTGGGATGATTCCTTTCTTG+TGG + chr1_4:57191792-57191811 Msa0172210:intron 40.0%
!! CCCATATATATCTGGCTTTC+AGG + chr1_4:57191838-57191857 Msa0172210:intron 40.0%
! CTTTCTGATTCGAATGTTCC+TGG + chr1_4:57191924-57191943 Msa0172210:CDS 40.0%
! ATTTTATGTTCTCCCTCACC+AGG - chr1_4:57191945-57191964 None:intergenic 40.0%
CAGGAATGTTACGTTGTAAC+CGG - chr1_4:57191980-57191999 None:intergenic 40.0%
TGAGTATTCGGATTGAAACC+AGG - chr1_4:57191999-57192018 None:intergenic 40.0%
GCATAATCAAATCAGCATCC+TGG - chr1_4:57192133-57192152 None:intergenic 40.0%
TATTGAGAAGTGAACCTCGT+GGG - chr1_4:57192168-57192187 None:intergenic 40.0%
ATATTGAGAAGTGAACCTCG+TGG - chr1_4:57192169-57192188 None:intergenic 40.0%
TCACTTCTCAATATTGAGGG+AGG + chr1_4:57192175-57192194 Msa0172210:CDS 40.0%
GGACAGGTAATTACTTTACC+TGG + chr1_4:57192282-57192301 Msa0172210:intron 40.0%
CATGACAATCAGCTGCAAAA+TGG - chr1_4:57192341-57192360 None:intergenic 40.0%
! CATTTTGCAGCTGATTGTCA+TGG + chr1_4:57192339-57192358 Msa0172210:CDS 40.0%
TAAGCCAGAAACTAAAGCTG+AGG + chr1_4:57192362-57192381 Msa0172210:CDS 40.0%
TGAATAGGGATTTCATCAGC+AGG - chr1_4:57192396-57192415 None:intergenic 40.0%
TCAATCTCAAAAGGAGGGTT+GGG - chr1_4:57192574-57192593 None:intergenic 40.0%
! GATTGACTTTGAACGACTAG+TGG + chr1_4:57192588-57192607 Msa0172210:CDS 40.0%
ACCTCTCTGATCTCTAATGT+TGG - chr1_4:57192667-57192686 None:intergenic 40.0%
TAGAAAGGAATTCACTGCCA+TGG + chr1_4:57192912-57192931 Msa0172210:CDS 40.0%
AGAAAGGAATTCACTGCCAT+GGG + chr1_4:57192913-57192932 Msa0172210:CDS 40.0%
GGGTGGTTATCTTACTTATG+CGG + chr1_4:57192933-57192952 Msa0172210:CDS 40.0%
GGTGGTTATCTTACTTATGC+GGG + chr1_4:57192934-57192953 Msa0172210:CDS 40.0%
TTATCTTACTTATGCGGGTG+AGG + chr1_4:57192939-57192958 Msa0172210:CDS 40.0%
!! GGACTGTGTGTTACTTTCAT+AGG + chr1_4:57193293-57193312 Msa0172210:intron 40.0%
GAGTAATACTTCAAGAGCCA+CGG + chr1_4:57193404-57193423 Msa0172210:CDS 40.0%
AGTAATACTTCAAGAGCCAC+GGG + chr1_4:57193405-57193424 Msa0172210:CDS 40.0%
CAAGTTACTCGTGCATGTTT+GGG - chr1_4:57193592-57193611 None:intergenic 40.0%
!! AAAGTTTGGTGCATCAAGTC+TGG + chr1_4:57193723-57193742 Msa0172210:CDS 40.0%
! CCATAAAAGCTCAGGCTTTT+AGG - chr1_4:57194148-57194167 None:intergenic 40.0%
! CCTAAAAGCCTGAGCTTTTA+TGG + chr1_4:57194145-57194164 Msa0172210:intron 40.0%
! AGTGTCACTGTCAAAGATAC+AGG - chr1_4:57194239-57194258 None:intergenic 40.0%
! TGGGTTAGATCAGTTGATAC+TGG + chr1_4:57194345-57194364 Msa0172210:intron 40.0%
TCCAATGTAGGGTTCAGATT+AGG + chr1_4:57194430-57194449 Msa0172210:intron 40.0%
AATATGTGGAAGGCCTTTGT+TGG + chr1_4:57194609-57194628 Msa0172210:CDS 40.0%
! ACATAGCAGCCAACAAGTTT+TGG + chr1_4:57194795-57194814 Msa0172210:intron 40.0%
AATTGTCCGCCAAAACTTGT+TGG - chr1_4:57194807-57194826 None:intergenic 40.0%
TGGATAGGCATGTATTAAGG+CGG + chr1_4:57194965-57194984 Msa0172210:intron 40.0%
GGACCAAAGCTATTAAAAGG+AGG + chr1_4:57195137-57195156 Msa0172210:intron 40.0%
AAGGAGTTAGTCGAGATTTC+TGG + chr1_4:57195173-57195192 Msa0172210:intron 40.0%
!!! TTTCTGGAGTTGTTTTACGG+AGG + chr1_4:57195189-57195208 Msa0172210:intron 40.0%
!!! TTCTGGAGTTGTTTTACGGA+GGG + chr1_4:57195190-57195209 Msa0172210:intron 40.0%
TGACAGAATACTCGAAACCT+AGG - chr1_4:57195238-57195257 None:intergenic 40.0%
AGTGAGTCGGACTTGATAAA+TGG + chr1_4:57195352-57195371 Msa0172210:intron 40.0%
CACACACGTTAGAAAGATGA+TGG - chr1_4:57195397-57195416 None:intergenic 40.0%
ATAATGATACGGGTAGTACC+TGG - chr1_4:57195611-57195630 None:intergenic 40.0%
ACCATTTGATCAGCTTATGG+GGG + chr1_4:57195702-57195721 Msa0172210:CDS 40.0%
ATGCACTGCCTGACAAATAT+AGG + chr1_4:57195824-57195843 Msa0172210:CDS 40.0%
TGCACTGCCTGACAAATATA+GGG + chr1_4:57195825-57195844 Msa0172210:CDS 40.0%
GCAGGGTAGAAGTGAAAAAT+AGG - chr1_4:57195874-57195893 None:intergenic 40.0%
! ATTTTTCACTTCTACCCTGC+TGG + chr1_4:57195874-57195893 Msa0172210:CDS 40.0%
AGAAATTGCTTGCTTCCACA+AGG + chr1_4:57196147-57196166 Msa0172210:CDS 40.0%
TTTATTTGTGTGTGGAAGGG+AGG + chr1_4:57196197-57196216 Msa0172210:intron 40.0%
TTATTTGTGTGTGGAAGGGA+GGG + chr1_4:57196198-57196217 Msa0172210:intron 40.0%
ATCTGTAAAATCGTACGCGT+CGG + chr1_4:57196361-57196380 Msa0172210:intron 40.0%
!!! TGTTTTTTTGTCATACGCCG+AGG + chr1_4:57196547-57196566 Msa0172210:intron 40.0%
!! TGTCGATTTGTGAATTTGGC+AGG + chr1_4:57196954-57196973 Msa0172210:intron 40.0%
TAAATCGGAGGATCGTAACA+CGG - chr1_4:57196990-57197009 None:intergenic 40.0%
GTTACAAGATCGTAAATCGG+AGG - chr1_4:57197002-57197021 None:intergenic 40.0%
GTAGTCAAAATCGAGATCCT+AGG - chr1_4:57197040-57197059 None:intergenic 40.0%
!!! GATCTCGATTTTGACTACCT+TGG + chr1_4:57197042-57197061 Msa0172210:intron 40.0%
!!! GATTTTGACTACCTTGGAAG+AGG + chr1_4:57197048-57197067 Msa0172210:intron 40.0%
!! TTTTGACTACCTTGGAAGAG+GGG + chr1_4:57197050-57197069 Msa0172210:intron 40.0%
!!! GTATTTTTTCTGGCAATCGC+TGG + chr1_4:57197406-57197425 Msa0172210:intron 40.0%
TGGCTAATCGACCAAAAACT+TGG - chr1_4:57197670-57197689 None:intergenic 40.0%
CACCAATTAACGCAAATGCT+AGG + chr1_4:57197708-57197727 Msa0172210:CDS 40.0%
GTGGGATGAATGGATATCTT+TGG + chr1_4:57197825-57197844 Msa0172210:CDS 40.0%
GATATCTGGCAATCCATCAA+TGG - chr1_4:57197891-57197910 None:intergenic 40.0%
TGGTGTAGTGATACCCAAAA+AGG + chr1_4:57198061-57198080 Msa0172210:CDS 40.0%
CTTAAGCAGGATGCTAAGTA+AGG - chr1_4:57198101-57198120 None:intergenic 40.0%
CTTACTTAGCATCCTGCTTA+AGG + chr1_4:57198099-57198118 Msa0172210:intron 40.0%
GCATCCTGCTTAAGGTTTAT+TGG + chr1_4:57198107-57198126 Msa0172210:intron 40.0%
ACCTAATTGCGGCAATAACT+AGG + chr1_4:57198191-57198210 Msa0172210:intron 40.0%
CTTTGGCATGAAGACAATGT+TGG + chr1_4:57198339-57198358 Msa0172210:CDS 40.0%
GTGTATGTGATGCATCTGAT+AGG + chr1_4:57198624-57198643 Msa0172210:intron 40.0%
TCTGATAGGTCACAAGTATC+TGG + chr1_4:57198638-57198657 Msa0172210:intron 40.0%
! CAAGTATCTGGAGCAATAAC+TGG + chr1_4:57198650-57198669 Msa0172210:CDS 40.0%
TATCCAGTCTCATCTAATGC+TGG + chr1_4:57198890-57198909 Msa0172210:CDS 40.0%
ATCCAGTCTCATCTAATGCT+GGG + chr1_4:57198891-57198910 Msa0172210:CDS 40.0%
TTAGAACACAAGATAGGCCA+AGG + chr1_4:57198933-57198952 Msa0172210:CDS 40.0%
CAGTTCCAAAATGTGAAGAC+TGG + chr1_4:57198965-57198984 Msa0172210:CDS 40.0%
TCTGCTTTAACAATGGAGGA+AGG + chr1_4:57198992-57199011 Msa0172210:CDS 40.0%
TTGGTTGTTGGTCCAGAAAT+TGG - chr1_4:57199043-57199062 None:intergenic 40.0%
!! CACAAATCGGGGTTCTAAAT+TGG - chr1_4:57199062-57199081 None:intergenic 40.0%
! ACCAGAATCTGGAGTTTCTT+GGG - chr1_4:57199233-57199252 None:intergenic 40.0%
! TACCAGAATCTGGAGTTTCT+TGG - chr1_4:57199234-57199253 None:intergenic 40.0%
GTAATCAATAGTGGTGGTTG+TGG + chr1_4:57199251-57199270 Msa0172210:exon 40.0%
TTATGCAACTAGGATACAGG+TGG - chr1_4:57199345-57199364 None:intergenic 40.0%
TGGTTATGCAACTAGGATAC+AGG - chr1_4:57199348-57199367 None:intergenic 40.0%
TGTGTGATGATTAGATGCAG+TGG + chr1_4:57199433-57199452 Msa0172210:three_prime_UTR 40.0%
! TACCTCAATGATAGTGTTCC+AGG + chr1_4:57199490-57199509 Msa0172210:three_prime_UTR 40.0%
! ACCTCAATGATAGTGTTCCA+GGG + chr1_4:57199491-57199510 Msa0172210:three_prime_UTR 40.0%
AGAATGTAACTGGTGTAAGC+CGG + chr1_4:57199562-57199581 Msa0172210:three_prime_UTR 40.0%
CACAATTTGATGTTCTCCAC+CGG - chr1_4:57199584-57199603 None:intergenic 40.0%
GGTGGAGAACATCAAATTGT+GGG + chr1_4:57199583-57199602 Msa0172210:three_prime_UTR 40.0%
ACAATGCAGAATACAGATGG+TGG - chr1_4:57199808-57199827 None:intergenic 40.0%
AGTAAGCGTCACCAACACTA+TGG + chr1_4:57189691-57189710 Msa0172210:exon 45.0%
GTAAGCGTCACCAACACTAT+GGG + chr1_4:57189692-57189711 Msa0172210:exon 45.0%
TAAGCGTCACCAACACTATG+GGG + chr1_4:57189693-57189712 Msa0172210:exon 45.0%
!! TGGGTTTAGAAGCGTCGATA+GGG - chr1_4:57189799-57189818 None:intergenic 45.0%
!! TTGGGTTTAGAAGCGTCGAT+AGG - chr1_4:57189800-57189819 None:intergenic 45.0%
GCTTCTAAACCCAATCCCAA+CGG + chr1_4:57189806-57189825 Msa0172210:CDS 45.0%
GAACTCAATTCCGTTGGGAT+TGG - chr1_4:57189819-57189838 None:intergenic 45.0%
TGCCATCAGGGTGAAAACAA+GGG - chr1_4:57189877-57189896 None:intergenic 45.0%
TTGCCATCAGGGTGAAAACA+AGG - chr1_4:57189878-57189897 None:intergenic 45.0%
! TTGTTTTCACCCTGATGGCA+AGG + chr1_4:57189877-57189896 Msa0172210:CDS 45.0%
GTAGTACAAACCTTGCCATC+AGG - chr1_4:57189890-57189909 None:intergenic 45.0%
TCATCATAAGTAGCTGGTGC+TGG - chr1_4:57189991-57190010 None:intergenic 45.0%
!! TCTTTTCCTTGGTTCGTCCA+AGG + chr1_4:57190046-57190065 Msa0172210:CDS 45.0%
GCAAGGTAAAGAAGCTTCCT+TGG - chr1_4:57190066-57190085 None:intergenic 45.0%
TAAATACCAGACCGGACCTT+TGG + chr1_4:57190245-57190264 Msa0172210:intron 45.0%
AAATACCAGACCGGACCTTT+GGG + chr1_4:57190246-57190265 Msa0172210:intron 45.0%
TAAACCATGACCCAAAGGTC+CGG - chr1_4:57190259-57190278 None:intergenic 45.0%
TGGAACCAACTGTCGTACAA+TGG + chr1_4:57190349-57190368 Msa0172210:intron 45.0%
GATCTCCATTGTACGACAGT+TGG - chr1_4:57190357-57190376 None:intergenic 45.0%
!!! TGTTTTGGGATCCCAATTGG+TGG - chr1_4:57190469-57190488 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_4:57190585-57190604 Msa0172210:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_4:57190586-57190605 Msa0172210:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG - chr1_4:57190782-57190801 None:intergenic 45.0%
TTGAGTTTCCCCAAATGAGG+TGG + chr1_4:57190808-57190827 Msa0172210:intron 45.0%
TGAGTTTCCCCAAATGAGGT+GGG + chr1_4:57190809-57190828 Msa0172210:intron 45.0%
TAGATGACATTGAGAGGGGA+AGG - chr1_4:57190867-57190886 None:intergenic 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG - chr1_4:57190896-57190915 None:intergenic 45.0%
AGGGAAGGGTTTGGCAAAAA+AGG - chr1_4:57190909-57190928 None:intergenic 45.0%
!! GGGGAGGGCTTTGAAAAAAA+AGG + chr1_4:57190972-57190991 Msa0172210:intron 45.0%
!!! ATAGAGGGTTTTGGAAGAGG+AGG + chr1_4:57191004-57191023 Msa0172210:intron 45.0%
!!! TAGAGGGTTTTGGAAGAGGA+GGG + chr1_4:57191005-57191024 Msa0172210:intron 45.0%
!! TTTTGGAAGAGGAGGGCTTT+GGG + chr1_4:57191012-57191031 Msa0172210:intron 45.0%
! TTTAGCTCCCCCAAATTAGG+GGG - chr1_4:57191065-57191084 None:intergenic 45.0%
!! CCTTTCACCTTTTCTGAGAG+AGG - chr1_4:57191178-57191197 None:intergenic 45.0%
CCTCTCTCAGAAAAGGTGAA+AGG + chr1_4:57191175-57191194 Msa0172210:intron 45.0%
TTTCCTCAGCCTTTCCTCTT+CGG - chr1_4:57191551-57191570 None:intergenic 45.0%
AGGAAAGAATTCGTCGAGGA+GGG + chr1_4:57191565-57191584 Msa0172210:CDS 45.0%
!!! GGGAGCACTTTTGTCTTCTA+AGG + chr1_4:57191585-57191604 Msa0172210:CDS 45.0%
GACTCAAATGTCATTACCCC+TGG + chr1_4:57191625-57191644 Msa0172210:CDS 45.0%
! TATTTTTCCAGGCAGGGTTG+TGG - chr1_4:57191711-57191730 None:intergenic 45.0%
CCCAACTTGAAAGGATCAAG+CGG - chr1_4:57191777-57191796 None:intergenic 45.0%
!! CCGCTTGATCCTTTCAAGTT+GGG + chr1_4:57191774-57191793 Msa0172210:intron 45.0%
ACGAGATCACTCCACAAGAA+AGG - chr1_4:57191806-57191825 None:intergenic 45.0%
TGATTCGAATGTTCCTGGTG+AGG + chr1_4:57191929-57191948 Msa0172210:CDS 45.0%
GATTCGAATGTTCCTGGTGA+GGG + chr1_4:57191930-57191949 Msa0172210:CDS 45.0%
CGGTTACAACGTAACATTCC+TGG + chr1_4:57191978-57191997 Msa0172210:CDS 45.0%
! TGGTGAGTTTTGCCCGAATT+TGG + chr1_4:57192036-57192055 Msa0172210:intron 45.0%
! TGATCAATCACCTGATGGAC+AGG + chr1_4:57192266-57192285 Msa0172210:intron 45.0%
! TGTTTTGTGTGTGGCCAAAC+TGG + chr1_4:57192315-57192334 Msa0172210:CDS 45.0%
CCAGAAACTAAAGCTGAGGA+CGG + chr1_4:57192366-57192385 Msa0172210:CDS 45.0%
CAGAAACTAAAGCTGAGGAC+GGG + chr1_4:57192367-57192386 Msa0172210:CDS 45.0%
GTCAATCTCAAAAGGAGGGT+TGG - chr1_4:57192575-57192594 None:intergenic 45.0%
GCCAACATTAGAGATCAGAG+AGG + chr1_4:57192663-57192682 Msa0172210:CDS 45.0%
! GAAACGAGTTCGAGTTCAAC+AGG + chr1_4:57193231-57193250 Msa0172210:CDS 45.0%
TTATCAGAAAATGAGGCCCG+TGG - chr1_4:57193424-57193443 None:intergenic 45.0%
! ACGGGCCTCATTTTCTGATA+AGG + chr1_4:57193423-57193442 Msa0172210:CDS 45.0%
GCAAGTTACTCGTGCATGTT+TGG - chr1_4:57193593-57193612 None:intergenic 45.0%
! AAAGCATCCATGACCAAGAG+AGG + chr1_4:57193981-57194000 Msa0172210:intron 45.0%
TTCAAACTCCAGACCTCTCT+TGG - chr1_4:57193997-57194016 None:intergenic 45.0%
CTAAAGAGCCATTGCATGAG+AGG + chr1_4:57194080-57194099 Msa0172210:intron 45.0%
TAACACAGCCTCTCATGCAA+TGG - chr1_4:57194091-57194110 None:intergenic 45.0%
! TGACAGTGACACTTGTTAGC+TGG + chr1_4:57194246-57194265 Msa0172210:intron 45.0%
TTGGAACAAAGGCAGAAGAG+GGG - chr1_4:57194291-57194310 None:intergenic 45.0%
CTTGGAACAAAGGCAGAAGA+GGG - chr1_4:57194292-57194311 None:intergenic 45.0%
CTCTTCTGCCTTTGTTCCAA+GGG + chr1_4:57194291-57194310 Msa0172210:intron 45.0%
AACAGACTCCCTTGGAACAA+AGG - chr1_4:57194302-57194321 None:intergenic 45.0%
TTCGTATGAACAGACTCCCT+TGG - chr1_4:57194310-57194329 None:intergenic 45.0%
GCCTAATCTGAACCCTACAT+TGG - chr1_4:57194434-57194453 None:intergenic 45.0%
CGAGCAGGATAATTGTTGTG+AGG - chr1_4:57194512-57194531 None:intergenic 45.0%
ACGGTGTATGCTCATGGAAA+TGG + chr1_4:57194651-57194670 Msa0172210:CDS 45.0%
!! TAGCAGCCAACAAGTTTTGG+CGG + chr1_4:57194798-57194817 Msa0172210:intron 45.0%
GCCCAACTACTCAGTTAAAC+TGG + chr1_4:57194891-57194910 Msa0172210:intron 45.0%
CTAGGTTCCTCCAATTACCT+AGG + chr1_4:57195218-57195237 Msa0172210:intron 45.0%
CTCGAAACCTAGGTAATTGG+AGG - chr1_4:57195228-57195247 None:intergenic 45.0%
!! CGTTAGAAAGATGATGGACC+AGG - chr1_4:57195391-57195410 None:intergenic 45.0%
! CTGGATTGCTTTGATGACTG+TGG + chr1_4:57195449-57195468 Msa0172210:intron 45.0%
ATGGTTTGAATGGCTCTCCA+GGG - chr1_4:57195687-57195706 None:intergenic 45.0%
AATGGTTTGAATGGCTCTCC+AGG - chr1_4:57195688-57195707 None:intergenic 45.0%
ACCCCCATAAGCTGATCAAA+TGG - chr1_4:57195706-57195725 None:intergenic 45.0%
TAGAGGAAGAACCTTGAAGC+AGG - chr1_4:57195733-57195752 None:intergenic 45.0%
GACAAGTTATCTCACCAGCA+GGG - chr1_4:57195891-57195910 None:intergenic 45.0%
TGGAAAACGATTTGCATGGC+AGG + chr1_4:57196002-57196021 Msa0172210:CDS 45.0%
TGTGTCTTCAAGCTTCCTTG+TGG - chr1_4:57196165-57196184 None:intergenic 45.0%
AAAATCGCGATCCAACTCGT+AGG + chr1_4:57196238-57196257 Msa0172210:intron 45.0%
AATCGTACGATCCTACGAGT+TGG - chr1_4:57196252-57196271 None:intergenic 45.0%
TGGTCGGAATCGTAATCTGA+TGG + chr1_4:57196306-57196325 Msa0172210:intron 45.0%
GGTCGGAATCGTAATCTGAT+GGG + chr1_4:57196307-57196326 Msa0172210:intron 45.0%
ACAGATTTCACGATCTTCCG+CGG - chr1_4:57196347-57196366 None:intergenic 45.0%
! CTGTGCAGAGTTGTTGTTCA+CGG + chr1_4:57196399-57196418 Msa0172210:intron 45.0%
! TGTGCAGAGTTGTTGTTCAC+GGG + chr1_4:57196400-57196419 Msa0172210:intron 45.0%
ATCGAGATCCTAGGCAAGAT+CGG - chr1_4:57197031-57197050 None:intergenic 45.0%
TTTGACTACCTTGGAAGAGG+GGG + chr1_4:57197051-57197070 Msa0172210:intron 45.0%
! GGCCAACAATTTTGGATGAC+TGG - chr1_4:57197090-57197109 None:intergenic 45.0%
GCAGCTGCAACTATTGAAGT+TGG + chr1_4:57197310-57197329 Msa0172210:intron 45.0%
! ATCGCTGGAAGCTTTTGCTT+TGG + chr1_4:57197421-57197440 Msa0172210:intron 45.0%
GTGAAGCCAAATCATGTGCA+CGG - chr1_4:57197631-57197650 None:intergenic 45.0%
!! GCTAGGTTGGTGAATGTCAA+TGG + chr1_4:57197725-57197744 Msa0172210:intron 45.0%
! ATTAGCAGTGGTGGGATGAA+TGG + chr1_4:57197815-57197834 Msa0172210:intron 45.0%
ATTGTACCGTCTCCCATTGA+TGG + chr1_4:57197875-57197894 Msa0172210:CDS 45.0%
TCATTATGAGACCTCCACCA+AGG - chr1_4:57197970-57197989 None:intergenic 45.0%
TTGGGTATCACTACACCATC+CGG - chr1_4:57198059-57198078 None:intergenic 45.0%
GCCTAGTTATTGCCGCAATT+AGG - chr1_4:57198195-57198214 None:intergenic 45.0%
TCAAACCTTCTCCTGTGCTT+TGG + chr1_4:57198322-57198341 Msa0172210:CDS 45.0%
TTGTCTTCATGCCAAAGCAC+AGG - chr1_4:57198336-57198355 None:intergenic 45.0%
GGCATGAAGACAATGTTGGT+CGG + chr1_4:57198343-57198362 Msa0172210:CDS 45.0%
GCATGAAGACAATGTTGGTC+GGG + chr1_4:57198344-57198363 Msa0172210:CDS 45.0%
CATGAAGACAATGTTGGTCG+GGG + chr1_4:57198345-57198364 Msa0172210:CDS 45.0%
TAATACATCCCACGGAGTGT+TGG + chr1_4:57198733-57198752 Msa0172210:CDS 45.0%
! TTTGTTGTATGGCGAACTGG+AGG - chr1_4:57198764-57198783 None:intergenic 45.0%
!! CTGTTTGTTGTATGGCGAAC+TGG - chr1_4:57198767-57198786 None:intergenic 45.0%
CAGTTCGCCATACAACAAAC+AGG + chr1_4:57198765-57198784 Msa0172210:CDS 45.0%
ACAAACAGGTTCCAATCAGC+TGG + chr1_4:57198779-57198798 Msa0172210:CDS 45.0%
TGGAACTGTTCTTGATGCCT+TGG - chr1_4:57198953-57198972 None:intergenic 45.0%
GTTGTTGGTCCAGAAATTGG+CGG - chr1_4:57199040-57199059 None:intergenic 45.0%
!! CGGGGTTCTAAATTGGTTGT+TGG - chr1_4:57199055-57199074 None:intergenic 45.0%
!!! GGGGCAAACGTGTTTTAACT+TGG - chr1_4:57199213-57199232 None:intergenic 45.0%
! CCAGAATCTGGAGTTTCTTG+GGG - chr1_4:57199232-57199251 None:intergenic 45.0%
! TGTGGGTCCTTTTGTGTTTG+AGG + chr1_4:57199269-57199288 Msa0172210:three_prime_UTR 45.0%
! CAAGGCACCTCAAACACAAA+AGG - chr1_4:57199279-57199298 None:intergenic 45.0%
!! CTTTTGTGTTTGAGGTGCCT+TGG + chr1_4:57199277-57199296 Msa0172210:three_prime_UTR 45.0%
GTGATGATTAGATGCAGTGG+AGG + chr1_4:57199436-57199455 Msa0172210:three_prime_UTR 45.0%
ACCCTGGAACACTATCATTG+AGG - chr1_4:57199495-57199514 None:intergenic 45.0%
CGGTGGAGAACATCAAATTG+TGG + chr1_4:57199582-57199601 Msa0172210:three_prime_UTR 45.0%
!! GCAATTGGTGTTTTGTTCCG+TGG + chr1_4:57199620-57199639 Msa0172210:three_prime_UTR 45.0%
AACAACCTAGTTCCATGCCA+CGG - chr1_4:57199640-57199659 None:intergenic 45.0%
TGCATTCCGTGTGTAAAGTC+TGG + chr1_4:57199659-57199678 Msa0172210:three_prime_UTR 45.0%
ATTCCGTGTGTAAAGTCTGG+TGG + chr1_4:57199662-57199681 Msa0172210:three_prime_UTR 45.0%
TTCCGTGTGTAAAGTCTGGT+GGG + chr1_4:57199663-57199682 Msa0172210:three_prime_UTR 45.0%
AACCCACCAGACTTTACACA+CGG - chr1_4:57199668-57199687 None:intergenic 45.0%
!! GCAGAATACAGATGGTGGAT+GGG - chr1_4:57199803-57199822 None:intergenic 45.0%
!! TGCAGAATACAGATGGTGGA+TGG - chr1_4:57199804-57199823 None:intergenic 45.0%
!!! GTTATAATTTTATTTATTAT+TGG + chr1_4:57194677-57194696 Msa0172210:intron 5.0%
!!! ATTAATTTTATTGTTTTTTA+TGG - chr1_4:57196764-57196783 None:intergenic 5.0%
AAGCGTCACCAACACTATGG+GGG + chr1_4:57189694-57189713 Msa0172210:exon 50.0%
GATCGAGAGTGGGTAACGAT+CGG - chr1_4:57189744-57189763 None:intergenic 50.0%
!! GGGTTTAGAAGCGTCGATAG+GGG - chr1_4:57189798-57189817 None:intergenic 50.0%
!!! CACCCTTGTTTTCACCCTGA+TGG + chr1_4:57189872-57189891 Msa0172210:CDS 50.0%
AAGCTTCCTTGGACGAACCA+AGG - chr1_4:57190055-57190074 None:intergenic 50.0%
ATGGAGATCAAACCAACCGG+TGG + chr1_4:57190368-57190387 Msa0172210:intron 50.0%
!! TGACCTGTTTCGGGTTCAAC+CGG + chr1_4:57190393-57190412 Msa0172210:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_4:57190584-57190603 Msa0172210:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - chr1_4:57190783-57190802 None:intergenic 50.0%
CATTGAGAGGGGAAGGCTTT+GGG - chr1_4:57190860-57190879 None:intergenic 50.0%
ACATTGAGAGGGGAAGGCTT+TGG - chr1_4:57190861-57190880 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr1_4:57190933-57190952 None:intergenic 50.0%
TAAGGGCCTGTTTGGGAGTT+TGG - chr1_4:57190943-57190962 None:intergenic 50.0%
AAACTCCCAAACAGGCCCTT+AGG + chr1_4:57190942-57190961 Msa0172210:intron 50.0%
CAAAGCCTAAGGGCCTGTTT+GGG - chr1_4:57190950-57190969 None:intergenic 50.0%
!!! GTTTTGGAAGAGGAGGGCTT+TGG + chr1_4:57191011-57191030 Msa0172210:intron 50.0%
TTTGGAAGAGGAGGGCTTTG+GGG + chr1_4:57191013-57191032 Msa0172210:intron 50.0%
GACTCTGTTTGGGAGTTTGG+AGG - chr1_4:57191243-57191262 None:intergenic 50.0%
AGCATTACAGGAAGCCGAAG+AGG + chr1_4:57191534-57191553 Msa0172210:intron 50.0%
TACAGGAAGCCGAAGAGGAA+AGG + chr1_4:57191539-57191558 Msa0172210:intron 50.0%
GCTGAGGAAAGAATTCGTCG+AGG + chr1_4:57191561-57191580 Msa0172210:CDS 50.0%
GAGGAAAGAATTCGTCGAGG+AGG + chr1_4:57191564-57191583 Msa0172210:CDS 50.0%
! GCCGCTTGATCCTTTCAAGT+TGG + chr1_4:57191773-57191792 Msa0172210:intron 50.0%
CAGCTGCAAAATGGCCAGTT+TGG - chr1_4:57192332-57192351 None:intergenic 50.0%
! CCGTCCTCAGCTTTAGTTTC+TGG - chr1_4:57192369-57192388 None:intergenic 50.0%
AAGGAATTCACTGCCATGGG+TGG + chr1_4:57192916-57192935 Msa0172210:CDS 50.0%
CTTCATGAACAGCGGCAGAT+TGG - chr1_4:57193198-57193217 None:intergenic 50.0%
! CGGCTTTCTGCAGCATGTTT+TGG + chr1_4:57193515-57193534 Msa0172210:intron 50.0%
!! GTTTGGTGCATCAAGTCTGG+AGG + chr1_4:57193726-57193745 Msa0172210:CDS 50.0%
ATCCATGACCAAGAGAGGTC+TGG + chr1_4:57193986-57194005 Msa0172210:intron 50.0%
ATTTGAAGAATGGGGCGGCA+AGG - chr1_4:57194020-57194039 None:intergenic 50.0%
CCTTGGAACAAAGGCAGAAG+AGG - chr1_4:57194293-57194312 None:intergenic 50.0%
CCTCTTCTGCCTTTGTTCCA+AGG + chr1_4:57194290-57194309 Msa0172210:intron 50.0%
! ACCTTCTGGAGAGCAACAGT+GGG - chr1_4:57194868-57194887 None:intergenic 50.0%
AGTAGTTGGGCTTGACCTTC+TGG - chr1_4:57194882-57194901 None:intergenic 50.0%
!! TGGAGTTGTTTTACGGAGGG+AGG + chr1_4:57195193-57195212 Msa0172210:intron 50.0%
! GTTTTACGGAGGGAGGTTCT+AGG + chr1_4:57195200-57195219 Msa0172210:intron 50.0%
TGGTTTGAATGGCTCTCCAG+GGG - chr1_4:57195686-57195705 None:intergenic 50.0%
CGACAAGTTATCTCACCAGC+AGG - chr1_4:57195892-57195911 None:intergenic 50.0%
TTTGCGATCTTGTCACCCCT+TGG + chr1_4:57196271-57196290 Msa0172210:intron 50.0%
! GAATCGTAATCTGATGGGCG+CGG + chr1_4:57196312-57196331 Msa0172210:intron 50.0%
CTGCACAGCATGAACAGAAG+CGG - chr1_4:57196387-57196406 None:intergenic 50.0%
! CAGAGTTGTTGTTCACGGGT+CGG + chr1_4:57196404-57196423 Msa0172210:intron 50.0%
TTGACTACCTTGGAAGAGGG+GGG + chr1_4:57197052-57197071 Msa0172210:intron 50.0%
!! CTGGTGGACTGTAGACGAAT+CGG - chr1_4:57197152-57197171 None:intergenic 50.0%
TGTCAGCCGTGCACATGATT+TGG + chr1_4:57197622-57197641 Msa0172210:CDS 50.0%
GGCAATCCATCAATGGGAGA+CGG - chr1_4:57197884-57197903 None:intergenic 50.0%
GGGATGTGTCCATGTCTACA+AGG - chr1_4:57198029-57198048 None:intergenic 50.0%
TGGACACATCCCAAAACCTC+CGG + chr1_4:57198037-57198056 Msa0172210:CDS 50.0%
! CTACACCATCCGGAGGTTTT+GGG - chr1_4:57198049-57198068 None:intergenic 50.0%
! ACTACACCATCCGGAGGTTT+TGG - chr1_4:57198050-57198069 None:intergenic 50.0%
TGATGCCTTCTGTTCCTTCC+TGG + chr1_4:57198229-57198248 Msa0172210:intron 50.0%
CTGATCCAGGAAGGAACAGA+AGG - chr1_4:57198237-57198256 None:intergenic 50.0%
TCATGCCAAAGCACAGGAGA+AGG - chr1_4:57198330-57198349 None:intergenic 50.0%
TTCCAATCAGCTGGACCATC+TGG + chr1_4:57198788-57198807 Msa0172210:CDS 50.0%
ATCCAGATGGTCCAGCTGAT+TGG - chr1_4:57198793-57198812 None:intergenic 50.0%
TCAGCTGGACCATCTGGATA+TGG + chr1_4:57198794-57198813 Msa0172210:CDS 50.0%
TCTGTCTAGTCATTGCGCCA+TGG - chr1_4:57198868-57198887 None:intergenic 50.0%
TGCCCAGCATTAGATGAGAC+TGG - chr1_4:57198896-57198915 None:intergenic 50.0%
AGTCTCATCTAATGCTGGGC+AGG + chr1_4:57198895-57198914 Msa0172210:CDS 50.0%
! ACCCCGATTTGTGCAGAACT+CGG + chr1_4:57199069-57199088 Msa0172210:CDS 50.0%
ACCCGAGTTCTGCACAAATC+GGG - chr1_4:57199074-57199093 None:intergenic 50.0%
GACCCGAGTTCTGCACAAAT+CGG - chr1_4:57199075-57199094 None:intergenic 50.0%
! TTCCACTTTAGGGGACGTAC+TGG - chr1_4:57199100-57199119 None:intergenic 50.0%
CCCCAAGAAACTCCAGATTC+TGG + chr1_4:57199229-57199248 Msa0172210:CDS 50.0%
GAGTGGGCAGATAGAAACCA+AGG - chr1_4:57199297-57199316 None:intergenic 50.0%
ATAGGTCCACTTCGAGGAGT+GGG - chr1_4:57199313-57199332 None:intergenic 50.0%
TACAGGTGGAGAGACAGCAT+AGG - chr1_4:57199331-57199350 None:intergenic 50.0%
TCAACATGCGCCCCTGTTAT+TGG - chr1_4:57199368-57199387 None:intergenic 50.0%
!! GGTGCTGCTCTGATTTGCAT+TGG + chr1_4:57199457-57199476 Msa0172210:three_prime_UTR 50.0%
ATGTAACTGGTGTAAGCCGG+TGG + chr1_4:57199565-57199584 Msa0172210:three_prime_UTR 50.0%
!! TGGTGTTTTGTTCCGTGGCA+TGG + chr1_4:57199625-57199644 Msa0172210:three_prime_UTR 50.0%
TTGTTCCGTGGCATGGAACT+AGG + chr1_4:57199632-57199651 Msa0172210:three_prime_UTR 50.0%
!! ATACAGATGGTGGATGGGCA+TGG - chr1_4:57199798-57199817 None:intergenic 50.0%
CGAGCCAGCGGTAAAAAGCT+GGG - chr1_4:57189721-57189740 None:intergenic 55.0%
CTACGTCGGAGATCGAGAGT+GGG - chr1_4:57189754-57189773 None:intergenic 55.0%
ACTACGTCGGAGATCGAGAG+TGG - chr1_4:57189755-57189774 None:intergenic 55.0%
TCCGACGTAGTCGAAGACGA+CGG + chr1_4:57189764-57189783 Msa0172210:CDS 55.0%
AAACAGGTCAGACCACCGGT+TGG - chr1_4:57190383-57190402 None:intergenic 55.0%
ACCGGTGGTCTGACCTGTTT+CGG + chr1_4:57190383-57190402 Msa0172210:intron 55.0%
GAACCGGTTGAACCCGAAAC+AGG - chr1_4:57190399-57190418 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr1_4:57190589-57190608 Msa0172210:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr1_4:57190590-57190609 Msa0172210:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr1_4:57190591-57190610 Msa0172210:intron 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG - chr1_4:57190928-57190947 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr1_4:57190590-57190609 None:intergenic 55.0%
TCCCCTCCAAACTCCCAAAC+AGG + chr1_4:57190934-57190953 Msa0172210:intron 55.0%
GCCTGTTTGGGAGTTTGGAG+GGG - chr1_4:57190938-57190957 None:intergenic 55.0%
GGCCTGTTTGGGAGTTTGGA+GGG - chr1_4:57190939-57190958 None:intergenic 55.0%
CCAAAGCCTAAGGGCCTGTT+TGG - chr1_4:57190951-57190970 None:intergenic 55.0%
CCAAACAGGCCCTTAGGCTT+TGG + chr1_4:57190948-57190967 Msa0172210:intron 55.0%
! AACAGGCCCTTAGGCTTTGG+AGG + chr1_4:57190951-57190970 Msa0172210:intron 55.0%
!! ACAGGCCCTTAGGCTTTGGA+GGG + chr1_4:57190952-57190971 Msa0172210:intron 55.0%
! TTGGAAGAGGAGGGCTTTGG+GGG + chr1_4:57191014-57191033 Msa0172210:intron 55.0%
! TTTGGAGGCGAGGGCTTTGA+GGG - chr1_4:57191228-57191247 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGCGA+GGG - chr1_4:57191237-57191256 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGCG+AGG - chr1_4:57191238-57191257 None:intergenic 55.0%
TGAATCAGCAACGTTCCCGG+CGG + chr1_4:57191406-57191425 Msa0172210:CDS 55.0%
! CAGCTGCATCTTTTGCAGCC+CGG - chr1_4:57191434-57191453 None:intergenic 55.0%
GGCTGCAAAAGATGCAGCTG+AGG + chr1_4:57191434-57191453 Msa0172210:CDS 55.0%
AAGCCGAAGAGGAAAGGCTG+AGG + chr1_4:57191545-57191564 Msa0172210:CDS 55.0%
GATTGAACCACAACCCTGCC+TGG + chr1_4:57191701-57191720 Msa0172210:CDS 55.0%
GCTCTCTTTAGCTACCCACG+AGG + chr1_4:57192151-57192170 Msa0172210:CDS 55.0%
GAGATGAGAGCTAGGGCAAG+AGG + chr1_4:57193382-57193401 Msa0172210:CDS 55.0%
GTTAGGGGAGCCTGGATACA+AGG + chr1_4:57193684-57193703 Msa0172210:CDS 55.0%
GGGAGCCTGGATACAAGGAA+AGG + chr1_4:57193689-57193708 Msa0172210:CDS 55.0%
CTCCAGACCTCTCTTGGTCA+TGG - chr1_4:57193991-57194010 None:intergenic 55.0%
TCCCACTGTTGCTCTCCAGA+AGG + chr1_4:57194864-57194883 Msa0172210:intron 55.0%
! GACCTTCTGGAGAGCAACAG+TGG - chr1_4:57194869-57194888 None:intergenic 55.0%
!! AATGGCTTGCTGCGCATTCC+TGG + chr1_4:57195370-57195389 Msa0172210:intron 55.0%
GGAAGAACCTTGAAGCAGGC+AGG - chr1_4:57195729-57195748 None:intergenic 55.0%
TGTGTGGAAGGGAGGGAAGA+GGG + chr1_4:57196205-57196224 Msa0172210:intron 55.0%
! GTAATCTGATGGGCGCGGTA+AGG + chr1_4:57196317-57196336 Msa0172210:intron 55.0%
ACCTCTCTCCGATCTTGCCT+AGG + chr1_4:57197020-57197039 Msa0172210:intron 55.0%
TCCTAGGCAAGATCGGAGAG+AGG - chr1_4:57197024-57197043 None:intergenic 55.0%
GTAACAACCCCCCTCTTCCA+AGG - chr1_4:57197062-57197081 None:intergenic 55.0%
TGGACTGTAGACGAATCGGC+AGG - chr1_4:57197148-57197167 None:intergenic 55.0%
CGATTCGTCTACAGTCCACC+AGG + chr1_4:57197150-57197169 Msa0172210:intron 55.0%
!!! CAGGTTTTGGGCACACCTTC+AGG - chr1_4:57197279-57197298 None:intergenic 55.0%
! CTGAAGGTGTGCCCAAAACC+TGG + chr1_4:57197277-57197296 Msa0172210:intron 55.0%
! CATCCCTCCTGCCAGGTTTT+GGG - chr1_4:57197291-57197310 None:intergenic 55.0%
TGCAGGACGAAGAACAGCGT+CGG + chr1_4:57197573-57197592 Msa0172210:intron 55.0%
CACATCCCAAAACCTCCGGA+TGG + chr1_4:57198041-57198060 Msa0172210:CDS 55.0%
GGTATCACTACACCATCCGG+AGG - chr1_4:57198056-57198075 None:intergenic 55.0%
AATGTTGGTCGGGGACAGCA+AGG + chr1_4:57198354-57198373 Msa0172210:CDS 55.0%
AGGTTGCTCCAACACTCCGT+GGG - chr1_4:57198744-57198763 None:intergenic 55.0%
CTCATCTAATGCTGGGCAGG+TGG + chr1_4:57198898-57198917 Msa0172210:CDS 55.0%
GATTGAGACCTGCACCATCG+AGG + chr1_4:57199014-57199033 Msa0172210:CDS 55.0%
CCCGAGTTCTGCACAAATCG+GGG - chr1_4:57199073-57199092 None:intergenic 55.0%
! CCCCGATTTGTGCAGAACTC+GGG + chr1_4:57199070-57199089 Msa0172210:CDS 55.0%
! CACTTTAGGGGACGTACTGG+AGG - chr1_4:57199097-57199116 None:intergenic 55.0%
CTCCAGTACGTCCCCTAAAG+TGG + chr1_4:57199095-57199114 Msa0172210:CDS 55.0%
GATGCAGCTTCTTGACGCCT+AGG - chr1_4:57199151-57199170 None:intergenic 55.0%
AGGCGTCAAGAAGCTGCATC+TGG + chr1_4:57199151-57199170 Msa0172210:CDS 55.0%
GGCGTCAAGAAGCTGCATCT+GGG + chr1_4:57199152-57199171 Msa0172210:CDS 55.0%
GCGTCAAGAAGCTGCATCTG+GGG + chr1_4:57199153-57199172 Msa0172210:CDS 55.0%
TATCTGCCCACTCCTCGAAG+TGG + chr1_4:57199304-57199323 Msa0172210:three_prime_UTR 55.0%
CATAGGTCCACTTCGAGGAG+TGG - chr1_4:57199314-57199333 None:intergenic 55.0%
GACAGCATAGGTCCACTTCG+AGG - chr1_4:57199319-57199338 None:intergenic 55.0%
AGCTGGGACCCCCATAGTGT+TGG - chr1_4:57189705-57189724 None:intergenic 60.0%
! GGGTCCCAGCTTTTTACCGC+TGG + chr1_4:57189714-57189733 Msa0172210:CDS 60.0%
GCGAGCCAGCGGTAAAAAGC+TGG - chr1_4:57189722-57189741 None:intergenic 60.0%
GCCGTCGTCTTCGACTACGT+CGG - chr1_4:57189768-57189787 None:intergenic 60.0%
CATGACCCAAAGGTCCGGTC+TGG - chr1_4:57190254-57190273 None:intergenic 60.0%
CAGACCGGACCTTTGGGTCA+TGG + chr1_4:57190252-57190271 Msa0172210:intron 60.0%
CCCGAAACAGGTCAGACCAC+CGG - chr1_4:57190387-57190406 None:intergenic 60.0%
CCGGTGGTCTGACCTGTTTC+GGG + chr1_4:57190384-57190403 Msa0172210:intron 60.0%
TGGAGGGGAGGGGATGACTT+TGG + chr1_4:57190601-57190620 Msa0172210:intron 60.0%
GGAGGGGAGGGGATGACTTT+GGG + chr1_4:57190602-57190621 Msa0172210:intron 60.0%
GAGGGGAGGGGATGACTTTG+GGG + chr1_4:57190603-57190622 Msa0172210:intron 60.0%
AGGGGAGGGGATGACTTTGG+GGG + chr1_4:57190604-57190623 Msa0172210:intron 60.0%
GGGAAGGGAAGGGAAGGGTT+TGG - chr1_4:57190918-57190937 None:intergenic 60.0%
TGGAGGGGAAGGGAAGGGAA+GGG - chr1_4:57190923-57190942 None:intergenic 60.0%
TTGGAGGGGAAGGGAAGGGA+AGG - chr1_4:57190924-57190943 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG - chr1_4:57190929-57190948 None:intergenic 60.0%
GGGCCTGTTTGGGAGTTTGG+AGG - chr1_4:57190940-57190959 None:intergenic 60.0%
!! CAGGCCCTTAGGCTTTGGAG+GGG + chr1_4:57190953-57190972 Msa0172210:intron 60.0%
CCCTCCCCTCCAAAGCCTAA+GGG - chr1_4:57190960-57190979 None:intergenic 60.0%
!! CCCTTAGGCTTTGGAGGGGA+GGG + chr1_4:57190957-57190976 Msa0172210:intron 60.0%
!! TGGAAGAGGAGGGCTTTGGG+GGG + chr1_4:57191015-57191034 Msa0172210:intron 60.0%
!! GCTTTGAGGGACGGAAGTGG+AGG - chr1_4:57191215-57191234 None:intergenic 60.0%
!! AGGGCTTTGAGGGACGGAAG+TGG - chr1_4:57191218-57191237 None:intergenic 60.0%
GTTTGGAGGCGAGGGCTTTG+AGG - chr1_4:57191229-57191248 None:intergenic 60.0%
CAGGTCAAGTTAGGGGAGCC+TGG + chr1_4:57193676-57193695 Msa0172210:intron 60.0%
GTGTGTGGAAGGGAGGGAAG+AGG + chr1_4:57196204-57196223 Msa0172210:intron 60.0%
TTGTCACCCCTTGGCGTGCT+GGG + chr1_4:57196280-57196299 Msa0172210:intron 60.0%
ACCATACCCCAGCACGCCAA+GGG - chr1_4:57196290-57196309 None:intergenic 60.0%
TTGGCGTGCTGGGGTATGGT+CGG + chr1_4:57196290-57196309 Msa0172210:intron 60.0%
AGGTGTGCCCAAAACCTGGC+AGG + chr1_4:57197281-57197300 Msa0172210:intron 60.0%
TGTGCCCAAAACCTGGCAGG+AGG + chr1_4:57197284-57197303 Msa0172210:intron 60.0%
GTGCCCAAAACCTGGCAGGA+GGG + chr1_4:57197285-57197304 Msa0172210:intron 60.0%
! GCATCCCTCCTGCCAGGTTT+TGG - chr1_4:57197292-57197311 None:intergenic 60.0%
TTGGTCGGGGACAGCAAGGA+AGG + chr1_4:57198358-57198377 Msa0172210:CDS 60.0%
TGGTCGGGGACAGCAAGGAA+GGG + chr1_4:57198359-57198378 Msa0172210:CDS 60.0%
GGGGACAGCAAGGAAGGGAA+AGG + chr1_4:57198364-57198383 Msa0172210:CDS 60.0%
GAGGTTGCTCCAACACTCCG+TGG - chr1_4:57198745-57198764 None:intergenic 60.0%
CCAGAAATTGGCGGCCTCGA+TGG - chr1_4:57199031-57199050 None:intergenic 60.0%
CCATCGAGGCCGCCAATTTC+TGG + chr1_4:57199028-57199047 Msa0172210:CDS 60.0%
GGTAACGATCGGCGAGCCAG+CGG - chr1_4:57189733-57189752 None:intergenic 65.0%
! CGGGTTCAACCGGTTCCGTC+TGG + chr1_4:57190403-57190422 Msa0172210:intron 65.0%
! GGAGGGGATGACTTTGGGGG+TGG + chr1_4:57190607-57190626 Msa0172210:intron 65.0%
!! GCCCTTAGGCTTTGGAGGGG+AGG + chr1_4:57190956-57190975 Msa0172210:intron 65.0%
GCCCTCCCCTCCAAAGCCTA+AGG - chr1_4:57190961-57190980 None:intergenic 65.0%
!! GAGGCGAGGGCTTTGAGGGA+CGG - chr1_4:57191224-57191243 None:intergenic 65.0%
AGCAACGTTCCCGGCGGTTC+CGG + chr1_4:57191412-57191431 Msa0172210:CDS 65.0%
! TTTTGCAGCCCGGAACCGCC+GGG - chr1_4:57191424-57191443 None:intergenic 65.0%
! CTTTTGCAGCCCGGAACCGC+CGG - chr1_4:57191425-57191444 None:intergenic 65.0%
TGGGGGTCCTGCCTGCTTCA+AGG + chr1_4:57195719-57195738 Msa0172210:CDS 65.0%
GGAAGGGAGGGAAGAGGGCA+TGG + chr1_4:57196210-57196229 Msa0172210:intron 65.0%
CTTGTCACCCCTTGGCGTGC+TGG + chr1_4:57196279-57196298 Msa0172210:intron 65.0%
TGTCACCCCTTGGCGTGCTG+GGG + chr1_4:57196281-57196300 Msa0172210:intron 65.0%
CCATACCCCAGCACGCCAAG+GGG - chr1_4:57196289-57196308 None:intergenic 65.0%
GACCATACCCCAGCACGCCA+AGG - chr1_4:57196291-57196310 None:intergenic 65.0%
ATTGGCGGCCTCGATGGTGC+AGG - chr1_4:57199025-57199044 None:intergenic 65.0%
GCAACGTTCCCGGCGGTTCC+GGG + chr1_4:57191413-57191432 Msa0172210:CDS 70.0%
CCCCTTGGCGTGCTGGGGTA+TGG + chr1_4:57196286-57196305 Msa0172210:intron 70.0%
GCAGCTGCATCCCTCCTGCC+AGG - chr1_4:57197298-57197317 None:intergenic 70.0%
GGGCGCGGTAAGGATCGCCG+CGG + chr1_4:57196327-57196346 Msa0172210:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57189550 57199870 57189550 ID=Msa0172210;Name=Msa0172210
chr1_4 mRNA 57189550 57199870 57189550 ID=Msa0172210-mRNA-1;Parent=Msa0172210;Name=Msa0172210-mRNA-1;_AED=0.18;_eAED=0.18;_QI=160|0.9|0.85|1|1|1|21|609|971
chr1_4 exon 57189550 57189898 57189550 ID=Msa0172210-mRNA-1:exon:17458;Parent=Msa0172210-mRNA-1
chr1_4 exon 57189988 57190090 57189988 ID=Msa0172210-mRNA-1:exon:17459;Parent=Msa0172210-mRNA-1
chr1_4 exon 57191382 57191458 57191382 ID=Msa0172210-mRNA-1:exon:17460;Parent=Msa0172210-mRNA-1
chr1_4 exon 57191544 57191735 57191544 ID=Msa0172210-mRNA-1:exon:17461;Parent=Msa0172210-mRNA-1
chr1_4 exon 57191918 57192037 57191918 ID=Msa0172210-mRNA-1:exon:17462;Parent=Msa0172210-mRNA-1
chr1_4 exon 57192134 57192196 57192134 ID=Msa0172210-mRNA-1:exon:17463;Parent=Msa0172210-mRNA-1
chr1_4 exon 57192288 57192431 57192288 ID=Msa0172210-mRNA-1:exon:17464;Parent=Msa0172210-mRNA-1
chr1_4 exon 57192511 57192684 57192511 ID=Msa0172210-mRNA-1:exon:17465;Parent=Msa0172210-mRNA-1
chr1_4 exon 57192883 57192960 57192883 ID=Msa0172210-mRNA-1:exon:17466;Parent=Msa0172210-mRNA-1
chr1_4 exon 57193166 57193252 57193166 ID=Msa0172210-mRNA-1:exon:17467;Parent=Msa0172210-mRNA-1
chr1_4 exon 57193364 57193444 57193364 ID=Msa0172210-mRNA-1:exon:17468;Parent=Msa0172210-mRNA-1
chr1_4 exon 57193679 57193774 57193679 ID=Msa0172210-mRNA-1:exon:17469;Parent=Msa0172210-mRNA-1
chr1_4 exon 57194602 57194672 57194602 ID=Msa0172210-mRNA-1:exon:17470;Parent=Msa0172210-mRNA-1
chr1_4 exon 57195612 57195740 57195612 ID=Msa0172210-mRNA-1:exon:17471;Parent=Msa0172210-mRNA-1
chr1_4 exon 57195819 57196023 57195819 ID=Msa0172210-mRNA-1:exon:17472;Parent=Msa0172210-mRNA-1
chr1_4 exon 57196116 57196190 57196116 ID=Msa0172210-mRNA-1:exon:17473;Parent=Msa0172210-mRNA-1
chr1_4 exon 57197578 57197729 57197578 ID=Msa0172210-mRNA-1:exon:17474;Parent=Msa0172210-mRNA-1
chr1_4 exon 57197823 57197927 57197823 ID=Msa0172210-mRNA-1:exon:17475;Parent=Msa0172210-mRNA-1
chr1_4 exon 57198007 57198082 57198007 ID=Msa0172210-mRNA-1:exon:17476;Parent=Msa0172210-mRNA-1
chr1_4 exon 57198303 57198385 57198303 ID=Msa0172210-mRNA-1:exon:17477;Parent=Msa0172210-mRNA-1
chr1_4 exon 57198646 57199870 57198646 ID=Msa0172210-mRNA-1:exon:17478;Parent=Msa0172210-mRNA-1
chr1_4 five_prime_UTR 57189550 57189709 57189550 ID=Msa0172210-mRNA-1:five_prime_utr;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57189710 57189898 57189710 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57189988 57190090 57189988 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57191382 57191458 57191382 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57191544 57191735 57191544 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57191918 57192037 57191918 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57192134 57192196 57192134 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57192288 57192431 57192288 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57192511 57192684 57192511 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57192883 57192960 57192883 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57193166 57193252 57193166 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57193364 57193444 57193364 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57193679 57193774 57193679 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57194602 57194672 57194602 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57195612 57195740 57195612 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57195819 57196023 57195819 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57196116 57196190 57196116 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57197578 57197729 57197578 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57197823 57197927 57197823 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57198007 57198082 57198007 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57198303 57198385 57198303 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 CDS 57198646 57199261 57198646 ID=Msa0172210-mRNA-1:cds;Parent=Msa0172210-mRNA-1
chr1_4 three_prime_UTR 57199262 57199870 57199262 ID=Msa0172210-mRNA-1:three_prime_utr;Parent=Msa0172210-mRNA-1
Gene Sequence

>Msa0172210

ATGGGGGTCCCAGCTTTTTACCGCTGGCTCGCCGATCGTTACCCACTCTCGATCTCCGACGTAGTCGAAGACGACGGCGTTTCGTCCCCTATCGACGCTTCTAAACCCAATCCCAACGGAATTGAGTTCGATAACTTGTACTTGGATATGAACGGTATCATTCACCCTTGTTTTCACCCTGATGGCAAGCCAGCACCAGCTACTTATGATGAAGTTTTTAAATTGGTATTTGATTATGTTGATCATCTCTTTTCCTTGGTTCGTCCAAGGAAGCTTCTTTACCTTGCAACTGATGGTGTTGCACCAAGAGCCAAAATGAATCAGCAACGTTCCCGGCGGTTCCGGGCTGCAAAAGATGCAGCTGAGGCTGAAGCCGAAGAGGAAAGGCTGAGGAAAGAATTCGTCGAGGAGGGAGCACTTTTGTCTTCTAAGGACAAGCCTGAGACTTCAGACTCAAATGTCATTACCCCTGGTACTAAATTTATGGCATCTCTGTCAGTGGCTCTTCAGTATTATGTACAGACTAGATTGAACCACAACCCTGCCTGGAAAAATATAAAGGTTATACTTTCTGATTCGAATGTTCCTGGTGAGGGAGAACATAAAATAATGGAATACATCCGGTTACAACGTAACATTCCTGGTTTCAATCCGAATACTCAACATTGTTTGTATGGATTGGATGCTGATTTGATTATGCTCTCTTTAGCTACCCACGAGGTTCACTTCTCAATATTGAGGGAGGTAATTACTTTACCTGGACAAGATAAGTGTTTTGTGTGTGGCCAAACTGGCCATTTTGCAGCTGATTGTCATGGTAAGCCAGAAACTAAAGCTGAGGACGGGAATCCTGCTGATGAAATCCCTATTCACAAGAAGAAATATCAGTATTCACAGTTTCTGAACATCTGGGTGCTTCGTGAATATTTGCAATATGAATTGGAGATTCCCAACCCTCCTTTTGAGATTGACTTTGAACGACTAGTGGATGATTTTGTATTTCTGTGCTTCTTTGTCGGCAATGACTTTCTTCCTCATATGCCAACATTAGAGATCAGAGAGGGAGCTATAAATTTACTGATGCATATATATAGAAAGGAATTCACTGCCATGGGTGGTTATCTTACTTATGCGGGTGAGGTTTTCTTAGATAGAGTAGAATATTTTATCCAATCTGCCGCTGTTCATGAAGATCAAATCTTTCAGAAACGAGTTCGAGTTCAACAGGTGGCAGAAAATAATGAAGAGATGAGAGCTAGGGCAAGAGGAGTAATACTTCAAGAGCCACGGGCCTCATTTTCTGATAAGGTCAAGTTAGGGGAGCCTGGATACAAGGAAAGGTATTATGTTGAAAAGTTTGGTGCATCAAGTCTGGAGGAGATTGATAAAATTAAGAAAGATATAGTTTTGAAATATGTGGAAGGCCTTTGTTGGATTTGCCAGTATTATTATAACGGTGTATGCTCATGGAAATGGTACTACCCGTATCATTATGCTCCTTTTGCTTCTGATCTTAAAGATCTACCTAATCTAGAAATAATTTTTTCCCCTGGAGAGCCATTCAAACCATTTGATCAGCTTATGGGGGTCCTGCCTGCTTCAAGTTCAAATGCACTGCCTGACAAATATAGGGATTTGATGACCGATCCTTCATCACCTATTTTTCACTTCTACCCTGCTGGTGAGATAACTTGTCGATTAAATTTGTATTCTGCTATATGTAACATATTTTCTTATTCTGATATTTACATGGATACCTTTTTGACAGATTTTGAGATTGATATGAATGGAAAACGATTTGCATGGCAGGGTGTTGCCAAATTGCCATTTATTGATGAGAAGAAATTGCTTGCTTCCACAAGGAAGCTTGAAGACACATTAACGGACGAAGAACAGCGTCGGAATAGTGTGATGCTTGATTTGCTTTATGTCAGCCGTGCACATGATTTGGCTTCACATATTTTACTGTATTACCAAGTTTTTGGTCGATTAGCCACTCATGAAAGATGTGTTTCACCAATTAACGCAAATGCTAGTGGTGGGATGAATGGATATCTTTGGGCATGTGAGAGAAATGTTTTGAGCTCTATTGTACCGTCTCCCATTGATGGATTGCCAGATATCGAGAGTAATCAAGTCTTAAATATTACATATCTCAATCCTTGTAGACATGGACACATCCCAAAACCTCCGGATGGTGTAGTGATACCCAAAAAGATAATAAAAGACATTGATATCAAACCTTCTCCTGTGCTTTGGCATGAAGACAATGTTGGTCGGGGACAGCAAGGAAGGGAAAGGTCACAAGTATCTGGAGCAATAACTGGATCTCAATTAGGAGAAGCAGCTCATCGTCTCGTCAAGAACACCCTTAACATTAAATGGAATAATACATCCCACGGAGTGTTGGAGCAACCTCCAGTTCGCCATACAACAAACAGGTTCCAATCAGCTGGACCATCTGGATATGGAAAATATTCTGGCGAGAACACTAACAGTTATTATGGAGAACATAATCACCATGGCGCAATGACTAGACAGAGATATCCAGTCTCATCTAATGCTGGGCAGGTGGACAGACAAAATTTTAGAACACAAGATAGGCCAAGGCATCAAGAACAGTTCCAAAATGTGAAGACTGGGTTTTCTGCTTTAACAATGGAGGAAGGATTGAGACCTGCACCATCGAGGCCGCCAATTTCTGGACCAACAACCAATTTAGAACCCCGATTTGTGCAGAACTCGGGTCCTCCAGTACGTCCCCTAAAGTGGAATACTAAAGCACCTGTAAATGGAATGTATCCTAGGCGTCAAGAAGCTGCATCTGGGGCAGTGCCTCATCATAAGCAGATAAAGAAGGTTTACCAAGTTAAAACACGTTTGCCCCAAGAAACTCCAGATTCTGGTAATCAATAG
Protein sequence

>Msa0172210

MGVPAFYRWLADRYPLSISDVVEDDGVSSPIDASKPNPNGIEFDNLYLDMNGIIHPCFHPDGKPAPATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFVEEGALLSSKDKPETSDSNVITPGTKFMASLSVALQYYVQTRLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTQHCLYGLDADLIMLSLATHEVHFSILREVITLPGQDKCFVCGQTGHFAADCHGKPETKAEDGNPADEIPIHKKKYQYSQFLNIWVLREYLQYELEIPNPPFEIDFERLVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSAAVHEDQIFQKRVRVQQVAENNEEMRARARGVILQEPRASFSDKVKLGEPGYKERYYVEKFGASSLEEIDKIKKDIVLKYVEGLCWICQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLMGVLPASSSNALPDKYRDLMTDPSSPIFHFYPAGEITCRLNLYSAICNIFSYSDIYMDTFLTDFEIDMNGKRFAWQGVAKLPFIDEKKLLASTRKLEDTLTDEEQRRNSVMLDLLYVSRAHDLASHILLYYQVFGRLATHERCVSPINANASGGMNGYLWACERNVLSSIVPSPIDGLPDIESNQVLNITYLNPCRHGHIPKPPDGVVIPKKIIKDIDIKPSPVLWHEDNVGRGQQGRERSQVSGAITGSQLGEAAHRLVKNTLNIKWNNTSHGVLEQPPVRHTTNRFQSAGPSGYGKYSGENTNSYYGEHNHHGAMTRQRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGFSALTMEEGLRPAPSRPPISGPTTNLEPRFVQNSGPPVRPLKWNTKAPVNGMYPRRQEAASGAVPHHKQIKKVYQVKTRLPQETPDSGNQ*