AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0127200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127200 MtrunA17_Chr1g0191031 94.142 973 23 3 1 971 1 941 0.0 1897
Msa0127200 MtrunA17_Chr7g0273801 69.718 994 239 13 1 971 1 955 0.0 1342
Msa0127200 MtrunA17_Chr1g0156381 66.822 428 133 3 1 422 1 425 0.0 607
Msa0127200 MtrunA17_Chr1g0156381 47.475 396 167 5 410 794 505 870 2.94e-113 374
Msa0127200 MtrunA17_Chr7g0240901 63.256 430 148 4 1 423 1 427 0.0 577
Msa0127200 MtrunA17_Chr7g0240901 51.648 364 144 3 435 796 529 862 6.26e-113 369
Msa0127200 MtrunA17_Chr4g0030651 64.336 429 142 5 1 423 1 424 0.0 566
Msa0127200 MtrunA17_Chr4g0030651 46.119 438 195 7 410 836 496 903 5.02e-112 369
Msa0127200 MtrunA17_Chr4g0025871 40.312 769 271 14 1 693 1 657 1.76e-175 527
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127200 AT1G54490.1 61.765 986 304 14 1 960 1 939 0.0 1160
Msa0127200 AT1G54490.2 60.917 916 291 13 65 960 13 881 0.0 1055
Msa0127200 AT1G75660.1 67.788 416 124 4 1 409 1 413 9.53e-180 549
Msa0127200 AT1G75660.1 46.782 404 162 5 412 793 501 873 3.06e-111 368
Msa0127200 AT5G42540.1 63.810 420 134 6 1 409 1 413 3.90e-170 523
Msa0127200 AT5G42540.1 45.628 366 162 4 435 792 521 857 5.79e-96 326
Msa0127200 AT5G42540.2 63.810 420 134 6 1 409 1 413 7.26e-170 523
Msa0127200 AT5G42540.2 44.297 377 162 5 435 792 521 868 5.85e-93 318

Find 308 sgRNAs with CRISPR-Local

Find 827 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTCCTCAGCTTTAGTTTC+TGG 0.126708 1_3:-56425476 None:intergenic
CCATCGAGGCCGCCAATTTC+TGG 0.148161 1_3:+56432139 Msa0127200:CDS
TACCCCTGGTACTAAATTTA+TGG 0.159962 1_3:+56424749 Msa0127200:CDS
AACCTAGCATTTGCGTTAAT+TGG 0.176869 1_3:-56430821 None:intergenic
AAAACCCAGTCTTCACATTT+TGG 0.192220 1_3:-56432081 None:intergenic
GGAACGTTGCTGATTCATTT+TGG 0.198460 1_3:-56424510 None:intergenic
CAAACCATTTGATCAGCTTA+TGG 0.199225 1_3:+56428811 Msa0127200:CDS
GTGCTTTAGTATTCCACTTT+AGG 0.206465 1_3:-56432219 None:intergenic
CTCATCAATAAATGGCAATT+TGG 0.206862 1_3:-56429235 None:intergenic
CACAAATCGGGGTTCTAAAT+TGG 0.228452 1_3:-56432170 None:intergenic
AGAACACCCTTAACATTAAA+TGG 0.238490 1_3:+56431819 Msa0127200:CDS
ACTACACCATCCGGAGGTTT+TGG 0.243525 1_3:-56431158 None:intergenic
TTGCTTCATTCAATTCAATT+TGG 0.251960 1_3:-56422753 None:intergenic
TGCTTTAGTATTCCACTTTA+GGG 0.260712 1_3:-56432218 None:intergenic
GATATTTCTTCTTGCGAATA+GGG 0.262081 1_3:-56425517 None:intergenic
AATTTCTTCTCATCAATAAA+TGG 0.269485 1_3:-56429243 None:intergenic
TCAACATGCGCCCCTGTTAT+TGG 0.271504 1_3:-56432476 None:intergenic
ATGCACTGCCTGACAAATAT+AGG 0.272218 1_3:+56428936 Msa0127200:CDS
TGAATATTTGCAATATGAAT+TGG 0.308477 1_3:+56425653 Msa0127200:CDS
AGCAACGTTCCCGGCGGTTC+CGG 0.309948 1_3:+56424522 Msa0127200:CDS
TACAAACAATGTTGAGTATT+CGG 0.314063 1_3:-56425118 None:intergenic
AATCTCAAAATCTGTCAAAA+AGG 0.314339 1_3:-56429083 None:intergenic
TTGGTTGTTGGTCCAGAAAT+TGG 0.315729 1_3:-56432151 None:intergenic
TATTATTCCATTTAATGTTA+AGG 0.315998 1_3:-56431826 None:intergenic
TTCTTGGATTAGAATGTAAC+TGG 0.317914 1_3:+56432663 Msa0127200:three_prime_UTR
CTAGGATACATTCCATTTAC+AGG 0.321321 1_3:-56432241 None:intergenic
AGGTATTATGTTGAAAAGTT+TGG 0.322326 1_3:+56426820 Msa0127200:CDS
AATACTAAAGCACCTGTAAA+TGG 0.324348 1_3:+56432229 Msa0127200:CDS
TCTGGATATGGAAAATATTC+TGG 0.324999 1_3:+56431917 Msa0127200:CDS
ATTCACAGTTTCTTAACATC+TGG 0.326588 1_3:+56425622 Msa0127200:CDS
CTTTCTGATTCGAATGTTCC+TGG 0.326687 1_3:+56425034 Msa0127200:CDS
TACCAGAATCTGGAGTTTCT+TGG 0.327695 1_3:-56432342 None:intergenic
GCAACGTTCCCGGCGGTTCC+GGG 0.327820 1_3:+56424523 Msa0127200:CDS
ATTATTCCATTTAATGTTAA+GGG 0.331340 1_3:-56431825 None:intergenic
AATACTCAACATTGTTTGTA+TGG 0.331774 1_3:+56425121 Msa0127200:CDS
ATTGTACCGTCTCCCATTGA+TGG 0.332636 1_3:+56430986 Msa0127200:CDS
ACCAGAATCTGGAGTTTCTT+GGG 0.340136 1_3:-56432341 None:intergenic
TACCTCAATGATAGTGTTCC+AGG 0.340863 1_3:+56432601 Msa0127200:three_prime_UTR
CTAGTTGCATAACCAATAAC+AGG 0.340870 1_3:+56432464 Msa0127200:three_prime_UTR
GTATTTCTGTGCTTCTTTGT+CGG 0.347913 1_3:+56425729 Msa0127200:CDS
TAGAATTTGACAAGCGTAGT+AGG 0.349742 1_3:+56432849 Msa0127200:three_prime_UTR
GTGGGATGAATGGATATCTT+TGG 0.350893 1_3:+56430936 Msa0127200:CDS
TGTCAGCCGTGCACATGATT+TGG 0.352233 1_3:+56430733 Msa0127200:CDS
AAACCATTTGATCAGCTTAT+GGG 0.353481 1_3:+56428812 Msa0127200:CDS
TGGAACTGTTCTTGATGCCT+TGG 0.354057 1_3:-56432061 None:intergenic
CAAGTATCTGGAGCAATAAC+TGG 0.354247 1_3:+56431761 Msa0127200:CDS
CGGTTACAACGTAACATTCC+TGG 0.354498 1_3:+56425088 Msa0127200:CDS
GCAATAACTGGATCTCAATT+AGG 0.356190 1_3:+56431773 Msa0127200:CDS
CCCCAAGAAACTCCAGATTC+TGG 0.357264 1_3:+56432340 Msa0127200:CDS
ACTTGATTACTCTCGATATC+TGG 0.357455 1_3:-56431013 None:intergenic
CAGCTGCAAAATGGCCAGTT+TGG 0.357659 1_3:-56425439 None:intergenic
AACTCAATTCCGTTGGGATT+GGG 0.365365 1_3:-56422925 None:intergenic
TCAGCTGGACCATCTGGATA+TGG 0.366429 1_3:+56431905 Msa0127200:CDS
AGTAAGCGTCACCAACACTA+TGG 0.368979 1_3:+56422801 Msa0127200:exon
TCTGATAGGTCACAAGTATC+TGG 0.369819 1_3:+56431749 Msa0127200:intron
TGATATTTCTTCTTGCGAAT+AGG 0.373308 1_3:-56425518 None:intergenic
AGGCGTCAAGAAGCTGCATC+TGG 0.374781 1_3:+56432262 Msa0127200:CDS
TTCCAATCAGCTGGACCATC+TGG 0.376364 1_3:+56431899 Msa0127200:CDS
CATGACAATCAGCTGCAAAA+TGG 0.376562 1_3:-56425448 None:intergenic
GAACATCAAATTGTGGGTAT+AGG 0.377510 1_3:+56432700 Msa0127200:three_prime_UTR
TTTCCTCAGCCTTTCCTCTT+CGG 0.380180 1_3:-56424658 None:intergenic
GAGAACACTAACAGTTATTA+TGG 0.386258 1_3:+56431941 Msa0127200:CDS
AGACAACCACTTTGATAAAT+CGG 0.389797 1_3:-56422686 None:intergenic
TATTCGCAAGAAGAAATATC+AGG 0.390134 1_3:+56425520 Msa0127200:CDS
TGCACTGCCTGACAAATATA+GGG 0.393425 1_3:+56428937 Msa0127200:CDS
CACTATTGATTACCAGAATC+TGG 0.395476 1_3:-56432352 None:intergenic
ATCTCTAATGTTGGCATATG+AGG 0.396928 1_3:-56425765 None:intergenic
AAAGTTTGGTGCATCAAGTC+TGG 0.397453 1_3:+56426834 Msa0127200:CDS
TGATAAATCGGAGGAGTATA+CGG 0.398993 1_3:-56422674 None:intergenic
ATCCAGATGGTCCAGCTGAT+TGG 0.402539 1_3:-56431901 None:intergenic
AAATGAATCAGCAACGTTCC+CGG 0.404265 1_3:+56424513 Msa0127200:CDS
AATGGTTTGAATGGCTCTCC+AGG 0.409476 1_3:-56428797 None:intergenic
GTTAAAGATTTAGCTGGGAT+TGG 0.410975 1_3:+56432877 Msa0127200:three_prime_UTR
GGAAATGTTAAAGATTTAGC+TGG 0.411695 1_3:+56432871 Msa0127200:three_prime_UTR
GAACTCAATTCCGTTGGGAT+TGG 0.413495 1_3:-56422926 None:intergenic
ACCCGAGTTCTGCACAAATC+GGG 0.418494 1_3:-56432182 None:intergenic
TCAATCTCAAAAGGAGGGTT+GGG 0.418825 1_3:-56425681 None:intergenic
CTGTTATTGGTTATGCAACT+AGG 0.418922 1_3:-56432463 None:intergenic
GTAGTACAAACCTTGCCATC+AGG 0.423189 1_3:-56422997 None:intergenic
TGAGTTCGATAACTTGTACT+TGG 0.423822 1_3:+56422942 Msa0127200:CDS
CGGGGTTCTAAATTGGTTGT+TGG 0.424536 1_3:-56432163 None:intergenic
GAAACGAGTTCGAGTTCAAC+AGG 0.427322 1_3:+56426342 Msa0127200:CDS
GACCCGAGTTCTGCACAAAT+CGG 0.429056 1_3:-56432183 None:intergenic
ATTAGCAGTGGTGGGATGAA+TGG 0.431329 1_3:+56430926 Msa0127200:intron
TCAAACCTTCTCCTGTGCTT+TGG 0.433255 1_3:+56431433 Msa0127200:CDS
TTGTTCCGTGGCATGGAACT+AGG 0.434019 1_3:+56432743 Msa0127200:three_prime_UTR
AGCTGATCAAATGGTTTGAA+TGG 0.434925 1_3:-56428806 None:intergenic
TGAGGGAGAACATAAAATAA+TGG 0.435875 1_3:+56425057 Msa0127200:CDS
TGGTGTAGTGATACCCAAAA+AGG 0.436441 1_3:+56431172 Msa0127200:CDS
AAGCTTCTTTACCTTGCAAC+TGG 0.436653 1_3:+56423179 Msa0127200:CDS
GCATGAAGACAATGTTGGTC+GGG 0.436656 1_3:+56431455 Msa0127200:CDS
CTGTTTGTTGTATGGCGAAC+TGG 0.437047 1_3:-56431875 None:intergenic
TGGTTATGCAACTAGGATAC+AGG 0.437875 1_3:-56432456 None:intergenic
ATTGGAACCTGTTTGTTGTA+TGG 0.442068 1_3:-56431883 None:intergenic
ATACACCGTTATAATAATAC+TGG 0.443894 1_3:-56427748 None:intergenic
ATTTGCCAGTATTATTATAA+CGG 0.444027 1_3:+56427743 Msa0127200:CDS
CCAGAAATTGGCGGCCTCGA+TGG 0.445376 1_3:-56432139 None:intergenic
CAGGAATGTTACGTTGTAAC+CGG 0.445921 1_3:-56425087 None:intergenic
ACATTTGAGTCTGAAGTCTC+AGG 0.445971 1_3:-56424723 None:intergenic
TCTGTCAAATGAATCACATC+AGG 0.446765 1_3:-56432502 None:intergenic
CTTCATGAACAGCGGCAGAT+TGG 0.447850 1_3:-56426306 None:intergenic
GTATAGGAATTTAGCGCAAT+TGG 0.448133 1_3:+56432716 Msa0127200:three_prime_UTR
ACGGTGTATGCTCATGGAAA+TGG 0.448433 1_3:+56427762 Msa0127200:CDS
GGTGCTGCTCTGATTTGCAT+TGG 0.450323 1_3:+56432568 Msa0127200:three_prime_UTR
CAGGTCAAGTTAGGGGAGCC+TGG 0.451540 1_3:+56426787 Msa0127200:intron
TGGGATGAATGGATATCTTT+GGG 0.458362 1_3:+56430937 Msa0127200:CDS
GCAAAAGGAGCATAATGATA+CGG 0.458852 1_3:-56428731 None:intergenic
ATCAAATCCCTATATTTGTC+AGG 0.459480 1_3:-56428944 None:intergenic
GTCAATCTCAAAAGGAGGGT+TGG 0.462823 1_3:-56425682 None:intergenic
GATTGAACCACAACCCTGCC+TGG 0.464174 1_3:+56424811 Msa0127200:CDS
AATATGTGGAAGGCCTTTGT+TGG 0.470088 1_3:+56427720 Msa0127200:CDS
CAGTTCCAAAATGTGAAGAC+TGG 0.471572 1_3:+56432076 Msa0127200:CDS
GATATCTGGCAATCCATCAA+TGG 0.473490 1_3:-56430999 None:intergenic
AAAACTTCATCATAAGTAGC+TGG 0.480642 1_3:-56423104 None:intergenic
GGACAGGTAATTACTTTACC+TGG 0.481240 1_3:+56425392 Msa0127200:intron
CAAGGCACCTCAAACACAAA+AGG 0.481541 1_3:-56432387 None:intergenic
GCAAGGTAAAGAAGCTTCCT+TGG 0.481590 1_3:-56423173 None:intergenic
TTCACAGTTTCTTAACATCT+GGG 0.482384 1_3:+56425623 Msa0127200:CDS
CGTTCAAAGTCAATCTCAAA+AGG 0.482551 1_3:-56425690 None:intergenic
TATCCAGTCTCATCTAATGC+TGG 0.484845 1_3:+56432001 Msa0127200:CDS
GTTAGGGGAGCCTGGATACA+AGG 0.486533 1_3:+56426795 Msa0127200:CDS
TTCTTATTCTGATATTTACA+TGG 0.486872 1_3:+56429057 Msa0127200:CDS
CTCCAGTACGTCCCCTAAAG+TGG 0.486894 1_3:+56432206 Msa0127200:CDS
ATAAAATAATGGAATACATC+CGG 0.489514 1_3:+56425068 Msa0127200:CDS
TAATACCTTTCCTTGTATCC+AGG 0.490409 1_3:-56426805 None:intergenic
CAGTTCGCCATACAACAAAC+AGG 0.491248 1_3:+56431876 Msa0127200:CDS
AGTCTCATCTAATGCTGGGC+AGG 0.491463 1_3:+56432006 Msa0127200:CDS
TTGGGTATCACTACACCATC+CGG 0.491979 1_3:-56431167 None:intergenic
CTGTAAATGGAATGTATCCT+AGG 0.492380 1_3:+56432242 Msa0127200:CDS
TTCCACTTTAGGGGACGTAC+TGG 0.495067 1_3:-56432208 None:intergenic
TTCTGCATTGTATGTTTGAA+AGG 0.496005 1_3:+56432928 Msa0127200:three_prime_UTR
ATAATGAAGAGATGAGAGCT+AGG 0.496892 1_3:+56426485 Msa0127200:CDS
GTAATCAATAGTGGTGGTTG+TGG 0.499240 1_3:+56432362 Msa0127200:exon
CGAATAGGGATTTCATCAGC+AGG 0.499574 1_3:-56425503 None:intergenic
CAGATTCTGGTAATCAATAG+TGG 0.500005 1_3:+56432353 Msa0127200:CDS
TCAACATTGTTTGTATGGAT+TGG 0.500025 1_3:+56425126 Msa0127200:CDS
CGACAAGTTATCTCACCAGC+AGG 0.500462 1_3:-56429001 None:intergenic
AGGTTCACTTCTCAATATTG+AGG 0.500834 1_3:+56425281 Msa0127200:CDS
ATATCTGGCAATCCATCAAT+GGG 0.500898 1_3:-56430998 None:intergenic
CACAATTTGATGTTCTCCAC+CGG 0.501120 1_3:-56432692 None:intergenic
GAAATGTTAAAGATTTAGCT+GGG 0.503359 1_3:+56432872 Msa0127200:three_prime_UTR
TTGGGTTTAGAAGCGTCGAT+AGG 0.504076 1_3:-56422907 None:intergenic
ACCTCTCTGATCTCTAATGT+TGG 0.505160 1_3:-56425774 None:intergenic
TTGGTCGGGGACAGCAAGGA+AGG 0.505479 1_3:+56431469 Msa0127200:CDS
GGTTCACTTCTCAATATTGA+GGG 0.508261 1_3:+56425282 Msa0127200:CDS
GAAGCTTGAAGACACATTAA+CGG 0.510764 1_3:+56429281 Msa0127200:CDS
ACCCCGATTTGTGCAGAACT+CGG 0.512326 1_3:+56432180 Msa0127200:CDS
TGCAGAATACAGATGGTGGA+TGG 0.512569 1_3:-56432912 None:intergenic
ACTGATGCATATATATAGAA+AGG 0.512680 1_3:+56426007 Msa0127200:CDS
GGTGGTTATCTTACTTATGC+GGG 0.513220 1_3:+56426044 Msa0127200:CDS
TGGGTTTAGAAGCGTCGATA+GGG 0.517050 1_3:-56422906 None:intergenic
GGGATGTGTCCATGTCTACA+AGG 0.517479 1_3:-56431137 None:intergenic
ACAAACAGGTTCCAATCAGC+TGG 0.518506 1_3:+56431890 Msa0127200:CDS
GTAAGCGTCACCAACACTAT+GGG 0.520319 1_3:+56422802 Msa0127200:exon
TTCTTTATCTGCTTATGATG+AGG 0.520588 1_3:-56432292 None:intergenic
GAGATGAGAGCTAGGGCAAG+AGG 0.521283 1_3:+56426493 Msa0127200:CDS
CTGAACCTTATCAGAAAATG+AGG 0.521357 1_3:-56426539 None:intergenic
GGCGTCAAGAAGCTGCATCT+GGG 0.521810 1_3:+56432263 Msa0127200:CDS
TTATCGAACTCAATTCCGTT+GGG 0.522931 1_3:-56422931 None:intergenic
TGGAAAACGATTTGCATGGC+AGG 0.526103 1_3:+56429114 Msa0127200:CDS
TTGCCATCAGGGTGAAAACA+AGG 0.527426 1_3:-56422985 None:intergenic
TTATCTTACTTATGCGGGTG+AGG 0.528053 1_3:+56426049 Msa0127200:CDS
TAGAAAGGAATTCACTGCCA+TGG 0.528597 1_3:+56426022 Msa0127200:CDS
GATTCGAATGTTCCTGGTGA+GGG 0.530248 1_3:+56425040 Msa0127200:CDS
TAATACATCCCACGGAGTGT+TGG 0.532494 1_3:+56431844 Msa0127200:CDS
GTTATCGAACTCAATTCCGT+TGG 0.533750 1_3:-56422932 None:intergenic
GGAAGAACCTTGAAGCAGGC+AGG 0.533838 1_3:-56428838 None:intergenic
CTCATCTAATGCTGGGCAGG+TGG 0.534927 1_3:+56432009 Msa0127200:CDS
CAAAAGGAGCATAATGATAC+GGG 0.536914 1_3:-56428730 None:intergenic
ATTATAACGGTGTATGCTCA+TGG 0.537434 1_3:+56427756 Msa0127200:CDS
TCATGCCAAAGCACAGGAGA+AGG 0.538530 1_3:-56431438 None:intergenic
ATTGGCGGCCTCGATGGTGC+AGG 0.540550 1_3:-56432133 None:intergenic
GATGCAGCTTCTTGACGCCT+AGG 0.540659 1_3:-56432259 None:intergenic
GTTGTTGGTCCAGAAATTGG+CGG 0.541645 1_3:-56432148 None:intergenic
GGCTGCAAAAGATGCAGCTG+AGG 0.541916 1_3:+56424544 Msa0127200:CDS
AACCATTTGATCAGCTTATG+GGG 0.542591 1_3:+56428813 Msa0127200:CDS
ATCCAGTCTCATCTAATGCT+GGG 0.544164 1_3:+56432002 Msa0127200:CDS
TGTATTCCGTGTGTAAAGTC+TGG 0.544969 1_3:+56432770 Msa0127200:three_prime_UTR
GACTCAAATGTCATTACCCC+TGG 0.547550 1_3:+56424735 Msa0127200:CDS
TCTTTAAGATCAGAAGCAAA+AGG 0.548870 1_3:-56428746 None:intergenic
GGCATGAAGACAATGTTGGT+CGG 0.549089 1_3:+56431454 Msa0127200:CDS
GGGTGGTTATCTTACTTATG+CGG 0.549668 1_3:+56426043 Msa0127200:CDS
CACCAATTAACGCAAATGCT+AGG 0.550066 1_3:+56430819 Msa0127200:CDS
TAATCAATAGTGGTGGTTGT+GGG 0.550651 1_3:+56432363 Msa0127200:exon
CCCCGATTTGTGCAGAACTC+GGG 0.552399 1_3:+56432181 Msa0127200:CDS
TGATTCGAATGTTCCTGGTG+AGG 0.556459 1_3:+56425039 Msa0127200:CDS
CCAGAATCTGGAGTTTCTTG+GGG 0.557442 1_3:-56432340 None:intergenic
TACAGGAAGCCGAAGAGGAA+AGG 0.557457 1_3:+56424649 Msa0127200:intron
ACAAAACACTTATCTTGTCC+AGG 0.557626 1_3:-56425410 None:intergenic
TGCCCAGCATTAGATGAGAC+TGG 0.557660 1_3:-56432004 None:intergenic
TGTGTGATGATTAGATGCAG+TGG 0.559254 1_3:+56432544 Msa0127200:three_prime_UTR
AGAATTTGACAAGCGTAGTA+GGG 0.560578 1_3:+56432850 Msa0127200:three_prime_UTR
AGAAAGGAATTCACTGCCAT+GGG 0.562929 1_3:+56426023 Msa0127200:CDS
TTAGAACACAAGATAGGCCA+AGG 0.563818 1_3:+56432044 Msa0127200:CDS
CGGTGGAGAACATCAAATTG+TGG 0.568643 1_3:+56432693 Msa0127200:three_prime_UTR
TAGTACAAACCTTGCCATCA+GGG 0.569197 1_3:-56422996 None:intergenic
ATACAGATGGTGGATGGGCA+TGG 0.570895 1_3:-56432906 None:intergenic
AGTTCCAAAATGTGAAGACT+GGG 0.571193 1_3:+56432077 Msa0127200:CDS
GGTGGAGAACATCAAATTGT+GGG 0.573141 1_3:+56432694 Msa0127200:three_prime_UTR
ATAGGTCCACTTCGAGGAGT+GGG 0.574461 1_3:-56432421 None:intergenic
TGATTTGCATTGGTTTGACA+TGG 0.574958 1_3:+56432578 Msa0127200:three_prime_UTR
ACTACGTCGGAGATCGAGAG+TGG 0.575023 1_3:-56422862 None:intergenic
TGGACACATCCCAAAACCTC+CGG 0.576106 1_3:+56431148 Msa0127200:CDS
GGGTTTAGAAGCGTCGATAG+GGG 0.576781 1_3:-56422905 None:intergenic
GAGTAATACTTCAAGAGCCA+CGG 0.576974 1_3:+56426515 Msa0127200:CDS
GACAGCATAGGTCCACTTCG+AGG 0.578283 1_3:-56432427 None:intergenic
TAGAGGAAGAACCTTGAAGC+AGG 0.581158 1_3:-56428842 None:intergenic
TTGTCTTCATGCCAAAGCAC+AGG 0.582226 1_3:-56431444 None:intergenic
ATTCCGTGTGTAAAGTCTGG+TGG 0.582323 1_3:+56432773 Msa0127200:three_prime_UTR
TCTGCTTTAACAATGGAGGA+AGG 0.582852 1_3:+56432103 Msa0127200:CDS
AGAATGTAACTGGTGTAAGC+CGG 0.583343 1_3:+56432673 Msa0127200:three_prime_UTR
TCATCATAAGCAGATAAAGA+AGG 0.585192 1_3:+56432294 Msa0127200:CDS
AAGCCGAAGAGGAAAGGCTG+AGG 0.585870 1_3:+56424655 Msa0127200:CDS
CATAGGTCCACTTCGAGGAG+TGG 0.586614 1_3:-56432422 None:intergenic
CAGAAACTAAAGCTGAGGAC+GGG 0.587267 1_3:+56425477 Msa0127200:CDS
AGGAAAGAATTCGTCGAGGA+GGG 0.588221 1_3:+56424675 Msa0127200:CDS
GATTGACTTTGAACGAGTAG+TGG 0.588362 1_3:+56425698 Msa0127200:CDS
GGGGACAGCAAGGAAGGGAA+AGG 0.588657 1_3:+56431475 Msa0127200:CDS
TCAAAGTCAATCTCAAAAGG+AGG 0.589615 1_3:-56425687 None:intergenic
ATTAATGAATGAGAGCGTGA+TGG 0.590724 1_3:+56422711 Msa0127200:five_prime_UTR
GTATACGGCAGTAATGTTTG+AGG 0.591085 1_3:-56422659 None:intergenic
TATCTGCCCACTCCTCGAAG+TGG 0.591578 1_3:+56432415 Msa0127200:three_prime_UTR
ATGGTTTGAATGGCTCTCCA+GGG 0.592631 1_3:-56428796 None:intergenic
GCAGAATACAGATGGTGGAT+GGG 0.594331 1_3:-56432911 None:intergenic
TAATGAAGAGATGAGAGCTA+GGG 0.596480 1_3:+56426486 Msa0127200:CDS
CACTTTAGGGGACGTACTGG+AGG 0.599208 1_3:-56432205 None:intergenic
TGAGTATTCGGATTGAAACC+AGG 0.599533 1_3:-56425106 None:intergenic
CATACAATGCAGAATACAGA+TGG 0.599947 1_3:-56432919 None:intergenic
AAATGGAATAATACATCCCA+CGG 0.600447 1_3:+56431836 Msa0127200:CDS
TCTGTCTAGTCATTGCGCCA+TGG 0.600714 1_3:-56431976 None:intergenic
CCAGAAACTAAAGCTGAGGA+CGG 0.601449 1_3:+56425476 Msa0127200:CDS
ACCTCAATGATAGTGTTCCA+GGG 0.601697 1_3:+56432602 Msa0127200:three_prime_UTR
CTTTGGCATGAAGACAATGT+TGG 0.602709 1_3:+56431450 Msa0127200:CDS
AGAAATTGCTTGCTTCCACA+AGG 0.603572 1_3:+56429259 Msa0127200:CDS
CATGAAGACAATGTTGGTCG+GGG 0.605014 1_3:+56431456 Msa0127200:CDS
GAGGTTGCTCCAACACTCCG+TGG 0.605581 1_3:-56431853 None:intergenic
AGTAATACTTCAAGAGCCAC+GGG 0.606371 1_3:+56426516 Msa0127200:CDS
CTGTCAAATGAATCACATCA+GGG 0.607565 1_3:-56432501 None:intergenic
TATCTCAATCCTTGTAGACA+TGG 0.608911 1_3:+56431128 Msa0127200:CDS
ACTCCTCCGATTTATCAAAG+TGG 0.609244 1_3:+56422680 Msa0127200:five_prime_UTR
TGGTCGGGGACAGCAAGGAA+GGG 0.610490 1_3:+56431470 Msa0127200:CDS
AATGTTGGTCGGGGACAGCA+AGG 0.612021 1_3:+56431465 Msa0127200:CDS
TCACTTCTCAATATTGAGGG+AGG 0.612602 1_3:+56425285 Msa0127200:CDS
GGCAATCCATCAATGGGAGA+CGG 0.612895 1_3:-56430992 None:intergenic
AAGCTTCCTTGGACGAACCA+AGG 0.614170 1_3:-56423162 None:intergenic
TGCCATAAATTTAGTACCAG+GGG 0.616503 1_3:-56424751 None:intergenic
CCCGAGTTCTGCACAAATCG+GGG 0.617800 1_3:-56432181 None:intergenic
AGGTTGCTCCAACACTCCGT+GGG 0.618962 1_3:-56431852 None:intergenic
AGTCATACATACCAGTTGCA+AGG 0.619127 1_3:-56423190 None:intergenic
GGTAACGATCGGCGAGCCAG+CGG 0.619212 1_3:-56422840 None:intergenic
GATCGAGAGTGGGTAACGAT+CGG 0.619774 1_3:-56422851 None:intergenic
TTCCGTGTGTAAAGTCTGGT+GGG 0.621361 1_3:+56432774 Msa0127200:three_prime_UTR
CAAAGTCAATCTCAAAAGGA+GGG 0.624467 1_3:-56425686 None:intergenic
ATTTATGGCATCTCTGTCAG+TGG 0.624598 1_3:+56424764 Msa0127200:CDS
AAGGAATTCACTGCCATGGG+TGG 0.626307 1_3:+56426026 Msa0127200:CDS
GCGTCAAGAAGCTGCATCTG+GGG 0.630800 1_3:+56432264 Msa0127200:CDS
TGAAACACATCTTTCATGAG+TGG 0.631778 1_3:-56430798 None:intergenic
ACCCTGGAACACTATCATTG+AGG 0.633647 1_3:-56432603 None:intergenic
ATGCCATAAATTTAGTACCA+GGG 0.633893 1_3:-56424752 None:intergenic
AGCATTACAGGAAGCCGAAG+AGG 0.635386 1_3:+56424644 Msa0127200:intron
AACAACCTAGTTCCATGCCA+CGG 0.635759 1_3:-56432748 None:intergenic
ACAATGCAGAATACAGATGG+TGG 0.635913 1_3:-56432916 None:intergenic
GCTTTAGTATTCCACTTTAG+GGG 0.639695 1_3:-56432217 None:intergenic
GATGCCATAAATTTAGTACC+AGG 0.641743 1_3:-56424753 None:intergenic
TGCAGGACGAAGAACAGCGT+CGG 0.642893 1_3:+56430684 Msa0127200:intron
TAAGCGTCACCAACACTATG+GGG 0.644124 1_3:+56422803 Msa0127200:exon
ATGTAACTGGTGTAAGCCGG+TGG 0.644196 1_3:+56432676 Msa0127200:three_prime_UTR
AATACTGGCAAATCCAACAA+AGG 0.645916 1_3:-56427733 None:intergenic
CACATCCCAAAACCTCCGGA+TGG 0.646836 1_3:+56431152 Msa0127200:CDS
ACCATTTGATCAGCTTATGG+GGG 0.647585 1_3:+56428814 Msa0127200:CDS
TATTGAGAAGTGAACCTCGT+GGG 0.648171 1_3:-56425275 None:intergenic
TGGTTTGAATGGCTCTCCAG+GGG 0.653431 1_3:-56428795 None:intergenic
AACTTGTACTTGGATATGAA+CGG 0.654472 1_3:+56422952 Msa0127200:CDS
GAGGAAAGAATTCGTCGAGG+AGG 0.656944 1_3:+56424674 Msa0127200:CDS
GGGAGCCTGGATACAAGGAA+AGG 0.657433 1_3:+56426800 Msa0127200:CDS
TAGTTGCATAACCAATAACA+GGG 0.657809 1_3:+56432465 Msa0127200:three_prime_UTR
TGTGTCTTCAAGCTTCCTTG+TGG 0.659538 1_3:-56429274 None:intergenic
GATTTGATCTTCATGAACAG+CGG 0.659769 1_3:-56426314 None:intergenic
ATAAGTAAGATAACCACCCA+TGG 0.660100 1_3:-56426039 None:intergenic
AACCCACCAGACTTTACACA+CGG 0.669386 1_3:-56432776 None:intergenic
GTTTGGTGCATCAAGTCTGG+AGG 0.670375 1_3:+56426837 Msa0127200:CDS
TACAGGTGGAGAGACAGCAT+AGG 0.670990 1_3:-56432439 None:intergenic
TGCCATCAGGGTGAAAACAA+GGG 0.672515 1_3:-56422984 None:intergenic
TGAATGGAAAACGATTTGCA+TGG 0.674776 1_3:+56429110 Msa0127200:CDS
TTTGTTGTATGGCGAACTGG+AGG 0.678143 1_3:-56431872 None:intergenic
TAAGCCAGAAACTAAAGCTG+AGG 0.678336 1_3:+56425472 Msa0127200:CDS
TTATGCAACTAGGATACAGG+TGG 0.681942 1_3:-56432453 None:intergenic
TTATCAGAAAATGAGGCCCG+TGG 0.682170 1_3:-56426532 None:intergenic
GTGAAGCCAAATCATGTGCA+CGG 0.683896 1_3:-56430739 None:intergenic
GAGTGGGCAGATAGAAACCA+AGG 0.684888 1_3:-56432405 None:intergenic
CAACCACTTTGATAAATCGG+AGG 0.687010 1_3:-56422683 None:intergenic
GACAAGTTATCTCACCAGCA+GGG 0.693407 1_3:-56429000 None:intergenic
GGTATCACTACACCATCCGG+AGG 0.693898 1_3:-56431164 None:intergenic
TATGGAGAACATAATCACCA+TGG 0.694386 1_3:+56431959 Msa0127200:CDS
ATTCTGGTAATCAATAGTGG+TGG 0.697737 1_3:+56432356 Msa0127200:exon
GTGATGATTAGATGCAGTGG+AGG 0.704655 1_3:+56432547 Msa0127200:three_prime_UTR
GCTTCTAAACCCAATCCCAA+CGG 0.705964 1_3:+56422916 Msa0127200:CDS
CTACGTCGGAGATCGAGAGT+GGG 0.712363 1_3:-56422861 None:intergenic
TGAATCAGCAACGTTCCCGG+CGG 0.716241 1_3:+56424516 Msa0127200:CDS
AAGCGTCACCAACACTATGG+GGG 0.716908 1_3:+56422804 Msa0127200:exon
GATTGAGACCTGCACCATCG+AGG 0.726329 1_3:+56432125 Msa0127200:CDS
ATATTGAGAAGTGAACCTCG+TGG 0.763937 1_3:-56425276 None:intergenic
TCCGACGTAGTCGAAGACGA+CGG 0.766547 1_3:+56422874 Msa0127200:CDS
AGTTGCATAACCAATAACAG+GGG 0.766686 1_3:+56432466 Msa0127200:three_prime_UTR
GCTCTCTTTAGCTACCCACG+AGG 0.777239 1_3:+56425261 Msa0127200:CDS
GCTGAGGAAAGAATTCGTCG+AGG 0.778095 1_3:+56424671 Msa0127200:CDS
GCCGTCGTCTTCGACTACGT+CGG 0.784088 1_3:-56422875 None:intergenic
GCCAACATTAGAGATCAGAG+AGG 0.794461 1_3:+56425773 Msa0127200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTTATTTATTATT+GGG + chr1_3:56427789-56427808 Msa0127200:intron 0.0%
!!! TATATTATTTTTAATAAATA+AGG + chr1_3:56429914-56429933 Msa0127200:intron 0.0%
!!! CAAATAAATTATTTTCTTTT+AGG - chr1_3:56429943-56429962 None:intergenic 10.0%
!! TTAATCTATCTATATTAAAA+TGG - chr1_3:56430473-56430492 None:intergenic 10.0%
!!! TTATGATGAAGTTTTTAAAT+TGG + chr1_3:56423112-56423131 Msa0127200:CDS 15.0%
!!! TAAAAACAATGAAATGTTTT+GGG - chr1_3:56423593-56423612 None:intergenic 15.0%
!!! TTAAAAACAATGAAATGTTT+TGG - chr1_3:56423594-56423613 None:intergenic 15.0%
!! TGTCTCTTTATATTTATTTA+TGG + chr1_3:56424977-56424996 Msa0127200:intron 15.0%
!! TTATTACTATGTATATGATA+TGG + chr1_3:56425868-56425887 Msa0127200:intron 15.0%
!! TATTACTATGTATATGATAT+GGG + chr1_3:56425869-56425888 Msa0127200:intron 15.0%
!!! AATATGTTTTTGTATTTTCT+TGG + chr1_3:56426581-56426600 Msa0127200:intron 15.0%
!! AAATAAAAAATTAAGTGAGT+CGG + chr1_3:56428451-56428470 Msa0127200:intron 15.0%
!!! GAAAAAATTATTTCTAGATT+AGG - chr1_3:56428776-56428795 None:intergenic 15.0%
!!! AAAAAATCAAACTTAACTTT+TGG - chr1_3:56429182-56429201 None:intergenic 15.0%
!!! TTGATTTTTTAAACTAGTTT+TGG + chr1_3:56429192-56429211 Msa0127200:intron 15.0%
!!! TGATTTTTTAAACTAGTTTT+GGG + chr1_3:56429193-56429212 Msa0127200:intron 15.0%
!!! TTTTATTGTATTTATGTGTA+TGG - chr1_3:56429848-56429867 None:intergenic 15.0%
!! TTTAACAAATCAAGTAATTA+AGG + chr1_3:56429990-56430009 Msa0127200:intron 15.0%
!!! AATAGATTTTTCAAATGAAT+AGG + chr1_3:56430570-56430589 Msa0127200:intron 15.0%
!! TAAAAAAAAAATCGAAGTAA+GGG - chr1_3:56431387-56431406 None:intergenic 15.0%
!! ATAAAAAAAAAATCGAAGTA+AGG - chr1_3:56431388-56431407 None:intergenic 15.0%
!! ATTATTCCATTTAATGTTAA+GGG - chr1_3:56431828-56431847 None:intergenic 15.0%
!! TATTATTCCATTTAATGTTA+AGG - chr1_3:56431829-56431848 None:intergenic 15.0%
!!! AAGATTATTTACTATTTTCT+TGG + chr1_3:56432647-56432666 Msa0127200:three_prime_UTR 15.0%
!!! TAATTCAATTTTGTAAATGC+AGG + chr1_3:56423076-56423095 Msa0127200:intron 20.0%
!!! CTAAAAAATTGTTTTAGAAG+AGG + chr1_3:56424190-56424209 Msa0127200:intron 20.0%
!! AAATATCAAAGTAATGAAAC+AGG - chr1_3:56424468-56424487 None:intergenic 20.0%
!!! TATTTATTTATGGTTTGCAT+TGG + chr1_3:56424987-56425006 Msa0127200:intron 20.0%
!! TTGGATGATTATTTATTTGA+AGG + chr1_3:56425006-56425025 Msa0127200:intron 20.0%
!!! ATAAAATAATGGAATACATC+CGG + chr1_3:56425068-56425087 Msa0127200:CDS 20.0%
!! ATAAGATGAAAATCCAAATT+CGG - chr1_3:56425162-56425181 None:intergenic 20.0%
!! TGAATATTTGCAATATGAAT+TGG + chr1_3:56425653-56425672 Msa0127200:CDS 20.0%
!! AAATATGCAATGGAATAAAA+AGG - chr1_3:56425917-56425936 None:intergenic 20.0%
!!! TTTGACTTAAATCATCAATT+TGG + chr1_3:56426199-56426218 Msa0127200:intron 20.0%
!!! AATTCTTGTTACTGTTTTAT+AGG + chr1_3:56426453-56426472 Msa0127200:intron 20.0%
!!! AAATTTAGTTTTTATGCTGT+CGG + chr1_3:56426606-56426625 Msa0127200:intron 20.0%
!! TGACTTTAATATATTGTTAG+AGG + chr1_3:56426978-56426997 Msa0127200:intron 20.0%
!! GAAAACATATGATTTATGAA+TGG - chr1_3:56427025-56427044 None:intergenic 20.0%
!! TCTCATTTATTCTGTTAAAA+TGG + chr1_3:56427288-56427307 Msa0127200:intron 20.0%
!! CTTCATCAAATTCTTATTAT+TGG + chr1_3:56427564-56427583 Msa0127200:intron 20.0%
!! AAATTCTTATTATTGGTAGA+TGG + chr1_3:56427571-56427590 Msa0127200:intron 20.0%
!! AATTCTTATTATTGGTAGAT+GGG + chr1_3:56427572-56427591 Msa0127200:intron 20.0%
!! ATTTGCCAGTATTATTATAA+CGG + chr1_3:56427743-56427762 Msa0127200:CDS 20.0%
!!! TTTTATTTATTATTGGGCAT+AGG + chr1_3:56427795-56427814 Msa0127200:intron 20.0%
!! CATAGGTTATATTTGTTTAT+TGG + chr1_3:56427812-56427831 Msa0127200:intron 20.0%
!!! TCTTTTTTTTATGATTGACT+TGG + chr1_3:56427840-56427859 Msa0127200:intron 20.0%
!! TTAAAGATATCCTAGTATAA+TGG + chr1_3:56428057-56428076 Msa0127200:intron 20.0%
!! ATCCAGTATATATTATGTTT+AGG - chr1_3:56428547-56428566 None:intergenic 20.0%
!! GATTATTGATGTAAATTTCT+AGG + chr1_3:56428615-56428634 Msa0127200:intron 20.0%
!! ATAGAAAGAAAAATGAACAA+TGG - chr1_3:56428678-56428697 None:intergenic 20.0%
!!! GACTTTTATTTAATTTTTCC+AGG + chr1_3:56428702-56428721 Msa0127200:intron 20.0%
!! TTCTTATTCTGATATTTACA+TGG + chr1_3:56429057-56429076 Msa0127200:CDS 20.0%
!!! GATTTTTTAAACTAGTTTTG+GGG + chr1_3:56429194-56429213 Msa0127200:intron 20.0%
!! AATTTCTTCTCATCAATAAA+TGG - chr1_3:56429246-56429265 None:intergenic 20.0%
!!! GTTTTTGTTTTTCTTTTTAC+AGG + chr1_3:56429699-56429718 Msa0127200:intron 20.0%
!! AAAATAAACCAAGTTGTAAA+AGG - chr1_3:56429738-56429757 None:intergenic 20.0%
!! TTATCCTTTCATAAATTTGA+AGG - chr1_3:56430222-56430241 None:intergenic 20.0%
!!! GAATATTTTAATGTGAACTT+CGG + chr1_3:56430283-56430302 Msa0127200:intron 20.0%
!! TAAAATAAGCAAATAATCTC+TGG - chr1_3:56430338-56430357 None:intergenic 20.0%
!! AATATCTGTAATTATTTGAG+AGG + chr1_3:56430871-56430890 Msa0127200:intron 20.0%
!! ATTATTCATTTACCTAATTG+CGG + chr1_3:56431291-56431310 Msa0127200:intron 20.0%
!! AAAAAAAAAATCGAAGTAAG+GGG - chr1_3:56431386-56431405 None:intergenic 20.0%
!! TATTCATGAAAAATCAATGT+TGG + chr1_3:56431636-56431655 Msa0127200:intron 20.0%
!! ATTCATGAAAAATCAATGTT+GGG + chr1_3:56431637-56431656 Msa0127200:intron 20.0%
!!! AAAATTTTAGAACACAAGAT+AGG + chr1_3:56432038-56432057 Msa0127200:CDS 20.0%
! TTGCTTCATTCAATTCAATT+TGG - chr1_3:56422756-56422775 None:intergenic 25.0%
!! TATTTCTAATGTTAAACCCT+AGG + chr1_3:56423271-56423290 Msa0127200:intron 25.0%
! ATTTCTAATGTTAAACCCTA+GGG + chr1_3:56423272-56423291 Msa0127200:intron 25.0%
! CTTGTAATATAATATCCCTA+GGG - chr1_3:56423290-56423309 None:intergenic 25.0%
! ACTTGTAATATAATATCCCT+AGG - chr1_3:56423291-56423310 None:intergenic 25.0%
! TTTATCATCCAATTCAACTA+CGG - chr1_3:56423402-56423421 None:intergenic 25.0%
! AAAACAACAACAAAAATCGA+TGG + chr1_3:56423439-56423458 Msa0127200:intron 25.0%
!! TTTAAAACACTGCATTAAAG+AGG + chr1_3:56423538-56423557 Msa0127200:intron 25.0%
! AAATCTTCTGCATTCAAATT+TGG + chr1_3:56423645-56423664 Msa0127200:intron 25.0%
! AATCTTCTGCATTCAAATTT+GGG + chr1_3:56423646-56423665 Msa0127200:intron 25.0%
! GTGGATAAAATATGGATAAA+TGG + chr1_3:56423736-56423755 Msa0127200:intron 25.0%
! AAACTCAAAAATTGTATTGG+AGG - chr1_3:56423906-56423925 None:intergenic 25.0%
!!! TTTTAGAAGAGGATTTTTGA+AGG + chr1_3:56424201-56424220 Msa0127200:intron 25.0%
! ATTACTTTGATATTTGCAGA+TGG + chr1_3:56424473-56424492 Msa0127200:intron 25.0%
!! TAGTACCTTTATATTTTTCC+AGG - chr1_3:56424832-56424851 None:intergenic 25.0%
!! TTTCTTTTCCCATATATATC+TGG + chr1_3:56424940-56424959 Msa0127200:intron 25.0%
! TACAAACAATGTTGAGTATT+CGG - chr1_3:56425121-56425140 None:intergenic 25.0%
! AATACTCAACATTGTTTGTA+TGG + chr1_3:56425121-56425140 Msa0127200:CDS 25.0%
! TAAGATGAAAATCCAAATTC+GGG - chr1_3:56425161-56425180 None:intergenic 25.0%
! AAAAATCAGTGAAAAAACCA+AGG - chr1_3:56425209-56425228 None:intergenic 25.0%
!!! GATTTTTTTATCTTTCAACC+AGG + chr1_3:56425222-56425241 Msa0127200:intron 25.0%
! TATTAGCTCATTGATATCAA+TGG + chr1_3:56425342-56425361 Msa0127200:intron 25.0%
! AATACACTTTCTACTATTAC+AGG + chr1_3:56425971-56425990 Msa0127200:intron 25.0%
! ATACACTTTCTACTATTACA+GGG + chr1_3:56425972-56425991 Msa0127200:intron 25.0%
! ACTGATGCATATATATAGAA+AGG + chr1_3:56426007-56426026 Msa0127200:CDS 25.0%
!! AGGTATTTTGCTTTCTAATT+AGG + chr1_3:56426362-56426381 Msa0127200:intron 25.0%
! AGGTATTATGTTGAAAAGTT+TGG + chr1_3:56426820-56426839 Msa0127200:CDS 25.0%
!!! AGCTTTTTATTTGAAGAATG+GGG - chr1_3:56427139-56427158 None:intergenic 25.0%
!!! CAGCTTTTTATTTGAAGAAT+GGG - chr1_3:56427140-56427159 None:intergenic 25.0%
!!! TCAGCTTTTTATTTGAAGAA+TGG - chr1_3:56427141-56427160 None:intergenic 25.0%
! TATTTCACAAAATCCAATGT+AGG + chr1_3:56427529-56427548 Msa0127200:intron 25.0%
! ATTTCACAAAATCCAATGTA+GGG + chr1_3:56427530-56427549 Msa0127200:intron 25.0%
! ATACACCGTTATAATAATAC+TGG - chr1_3:56427751-56427770 None:intergenic 25.0%
! TGAAAAGATGTAACTGATAA+AGG + chr1_3:56428148-56428167 Msa0127200:intron 25.0%
! CTCCTAAACATAATATATAC+TGG + chr1_3:56428542-56428561 Msa0127200:intron 25.0%
! TCAATAATCTAAAAGCAACT+CGG - chr1_3:56428604-56428623 None:intergenic 25.0%
! AATCTCAAAATCTGTCAAAA+AGG - chr1_3:56429086-56429105 None:intergenic 25.0%
!!! GATTTTGAGATTGATATGAA+TGG + chr1_3:56429094-56429113 Msa0127200:CDS 25.0%
!! TGTTTTCCATCAAGTAATTA+AGG + chr1_3:56429961-56429980 Msa0127200:intron 25.0%
! AAAACACCTTAATTACTTGA+TGG - chr1_3:56429970-56429989 None:intergenic 25.0%
! ATGCATACACATGAATTTAT+AGG + chr1_3:56430034-56430053 Msa0127200:intron 25.0%
!!! TATATGTCGATTTGTGAATT+TGG + chr1_3:56430061-56430080 Msa0127200:intron 25.0%
! AGTTCACATTAAAATATTCC+TGG - chr1_3:56430282-56430301 None:intergenic 25.0%
!! TTACTGTATTACCAAGTTTT+TGG + chr1_3:56430767-56430786 Msa0127200:CDS 25.0%
!!! ACCTAGTATTTTAAATTCCT+TGG + chr1_3:56431061-56431080 Msa0127200:intron 25.0%
!! ACCAAGGAATTTAAAATACT+AGG - chr1_3:56431065-56431084 None:intergenic 25.0%
!!! TAGTATTTTAAATTCCTTGG+TGG + chr1_3:56431064-56431083 Msa0127200:intron 25.0%
! AAAAAAAAATCGAAGTAAGG+GGG - chr1_3:56431385-56431404 None:intergenic 25.0%
! TTTAATGTTCCATGTGAAAA+TGG + chr1_3:56431531-56431550 Msa0127200:intron 25.0%
! TTCATGAAAAATCAATGTTG+GGG + chr1_3:56431638-56431657 Msa0127200:intron 25.0%
! GAAATGTTAAAGATTTAGCT+GGG + chr1_3:56432872-56432891 Msa0127200:three_prime_UTR 25.0%
AGACAACCACTTTGATAAAT+CGG - chr1_3:56422689-56422708 None:intergenic 30.0%
AACTTGTACTTGGATATGAA+CGG + chr1_3:56422952-56422971 Msa0127200:CDS 30.0%
AAAACTTCATCATAAGTAGC+TGG - chr1_3:56423107-56423126 None:intergenic 30.0%
!! CAATGTTTTAAATACCAGAC+CGG + chr1_3:56423347-56423366 Msa0127200:intron 30.0%
!! CTACAATGTTTTTGTCCTTA+AGG + chr1_3:56423673-56423692 Msa0127200:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG - chr1_3:56423902-56423921 None:intergenic 30.0%
GGGAAACTCAAAAATTGTAT+TGG - chr1_3:56423909-56423928 None:intergenic 30.0%
AGAAATAGATGACATTGAGA+GGG - chr1_3:56423982-56424001 None:intergenic 30.0%
AAGAAATAGATGACATTGAG+AGG - chr1_3:56423983-56424002 None:intergenic 30.0%
AAAAAGGAAGGAAGAAATAG+AGG + chr1_3:56424098-56424117 Msa0127200:intron 30.0%
AAAAGGAAGGAAGAAATAGA+GGG + chr1_3:56424099-56424118 Msa0127200:intron 30.0%
AACATAAAATCCCCCTAATT+TGG + chr1_3:56424162-56424181 Msa0127200:intron 30.0%
ACATAAAATCCCCCTAATTT+GGG + chr1_3:56424163-56424182 Msa0127200:intron 30.0%
TTAATATGCTCATGCTTTCA+AGG + chr1_3:56424578-56424597 Msa0127200:intron 30.0%
ATGCCATAAATTTAGTACCA+GGG - chr1_3:56424755-56424774 None:intergenic 30.0%
TGAGGGAGAACATAAAATAA+TGG + chr1_3:56425057-56425076 Msa0127200:CDS 30.0%
TCAACATTGTTTGTATGGAT+TGG + chr1_3:56425126-56425145 Msa0127200:CDS 30.0%
GATATTTCTTCTTGCGAATA+GGG - chr1_3:56425520-56425539 None:intergenic 30.0%
TGATATTTCTTCTTGCGAAT+AGG - chr1_3:56425521-56425540 None:intergenic 30.0%
TATTCGCAAGAAGAAATATC+AGG + chr1_3:56425520-56425539 Msa0127200:CDS 30.0%
AAGAAGAAATATCAGGTTTG+AGG + chr1_3:56425527-56425546 Msa0127200:intron 30.0%
ATTCACAGTTTCTTAACATC+TGG + chr1_3:56425622-56425641 Msa0127200:CDS 30.0%
TTCACAGTTTCTTAACATCT+GGG + chr1_3:56425623-56425642 Msa0127200:CDS 30.0%
AAGTACAGTTTAGTGTAACA+TGG - chr1_3:56425816-56425835 None:intergenic 30.0%
TACAACATTGACAATTAGGT+AGG - chr1_3:56425945-56425964 None:intergenic 30.0%
TGAGTACAACATTGACAATT+AGG - chr1_3:56425949-56425968 None:intergenic 30.0%
ACAAACAAAAAGATGAACAC+AGG - chr1_3:56426090-56426109 None:intergenic 30.0%
TGAATATCTTAATGTCTTCC+AGG + chr1_3:56426255-56426274 Msa0127200:intron 30.0%
! TCTTGTTACTGTTTTATAGG+TGG + chr1_3:56426456-56426475 Msa0127200:intron 30.0%
ATCCAGAAAAATTATTCTGG+TGG - chr1_3:56426656-56426675 None:intergenic 30.0%
GCAATCCAGAAAAATTATTC+TGG - chr1_3:56426659-56426678 None:intergenic 30.0%
TTCATTATGAAAACTTTGCC+AGG - chr1_3:56426747-56426766 None:intergenic 30.0%
!!! TGCATGTTTCTTATTTTCTC+AGG + chr1_3:56426768-56426787 Msa0127200:intron 30.0%
! TTATTTTCTCAGGTCAAGTT+AGG + chr1_3:56426778-56426797 Msa0127200:intron 30.0%
! TATTTTCTCAGGTCAAGTTA+GGG + chr1_3:56426779-56426798 Msa0127200:intron 30.0%
GAACAGCAAATAATTTGACA+AGG - chr1_3:56426927-56426946 None:intergenic 30.0%
!! GTCAAATTATTTGCTGTTCT+TGG + chr1_3:56426928-56426947 Msa0127200:intron 30.0%
!! TTTTTATTTGAAGAATGGGG+CGG - chr1_3:56427136-56427155 None:intergenic 30.0%
!! TCTCATTAATTTCTGGCTAT+TGG + chr1_3:56427644-56427663 Msa0127200:intron 30.0%
CACATATTTCAAAACCTACA+AGG - chr1_3:56427708-56427727 None:intergenic 30.0%
!!! CTTGTAGGTTTTGAAATATG+TGG + chr1_3:56427706-56427725 Msa0127200:intron 30.0%
!!! TAGGTTTTGAAATATGTGGA+AGG + chr1_3:56427710-56427729 Msa0127200:intron 30.0%
!! TTATGATTGACTTGGTAGAA+TGG + chr1_3:56427848-56427867 Msa0127200:intron 30.0%
!! GATATCCTAGTATAATGGAT+AGG + chr1_3:56428062-56428081 Msa0127200:intron 30.0%
! TAATGGATAGGCATGTATTA+AGG + chr1_3:56428074-56428093 Msa0127200:intron 30.0%
! TGATAAGTAATGCTTCCTTT+TGG + chr1_3:56428116-56428135 Msa0127200:intron 30.0%
! TTTTCATAAACTCGTCCAAA+AGG - chr1_3:56428134-56428153 None:intergenic 30.0%
ATGTAACTGATAAAGGAGTT+AGG + chr1_3:56428155-56428174 Msa0127200:intron 30.0%
ATAAAGGAGTTAGGATAAAG+AGG + chr1_3:56428164-56428183 Msa0127200:intron 30.0%
TAAAGGAGTTAGGATAAAGA+GGG + chr1_3:56428165-56428184 Msa0127200:intron 30.0%
! ATTCCTCCTTTTAATAGCTT+TGG - chr1_3:56428255-56428274 None:intergenic 30.0%
AGGAGGAATTAAACAAAGAA+AGG + chr1_3:56428266-56428285 Msa0127200:intron 30.0%
!!! AGATTTCTGGAGTTGTTTTA+CGG + chr1_3:56428298-56428317 Msa0127200:intron 30.0%
AAATGAACAATGGTCATGTA+TGG - chr1_3:56428668-56428687 None:intergenic 30.0%
!! TCTTTAAGATCAGAAGCAAA+AGG - chr1_3:56428749-56428768 None:intergenic 30.0%
!!! CTAGAAATAATTTTTTCCCC+TGG + chr1_3:56428779-56428798 Msa0127200:CDS 30.0%
AAACCATTTGATCAGCTTAT+GGG + chr1_3:56428812-56428831 Msa0127200:CDS 30.0%
TAGATCTAAGAACATGATAG+AGG - chr1_3:56428862-56428881 None:intergenic 30.0%
ATCAAATCCCTATATTTGTC+AGG - chr1_3:56428947-56428966 None:intergenic 30.0%
AAAAATAGGTGATGAAGGAT+CGG - chr1_3:56428972-56428991 None:intergenic 30.0%
AAGTGAAAAATAGGTGATGA+AGG - chr1_3:56428977-56428996 None:intergenic 30.0%
CTCATCAATAAATGGCAATT+TGG - chr1_3:56429238-56429257 None:intergenic 30.0%
!!! AAGTTTTATTTGTGTGTGGA+AGG + chr1_3:56429305-56429324 Msa0127200:intron 30.0%
!!! AGTTTTATTTGTGTGTGGAA+GGG + chr1_3:56429306-56429325 Msa0127200:intron 30.0%
!!! ACAACGTCGTTTTAAGAAAA+GGG - chr1_3:56429551-56429570 None:intergenic 30.0%
! TTTTCACGTGTTGTATTGTA+GGG - chr1_3:56429585-56429604 None:intergenic 30.0%
CAAACGTCTAAAAAAAACCT+CGG - chr1_3:56429679-56429698 None:intergenic 30.0%
! ATTCTTCTCCTTTTACAACT+TGG + chr1_3:56429727-56429746 Msa0127200:intron 30.0%
! AATTTGAAGGCCAACAATTT+TGG - chr1_3:56430209-56430228 None:intergenic 30.0%
! TTGGCCTTCAAATTTATGAA+AGG + chr1_3:56430215-56430234 Msa0127200:intron 30.0%
TCACATTAAAATATTCCTGG+TGG - chr1_3:56430279-56430298 None:intergenic 30.0%
ACAGAGCAATAATTAACACT+TGG - chr1_3:56430496-56430515 None:intergenic 30.0%
!!! TTGCTCTGTTGTATTTTTTC+TGG + chr1_3:56430507-56430526 Msa0127200:intron 30.0%
!! ATTTCTGTTTTGTTAGATGC+AGG + chr1_3:56430667-56430686 Msa0127200:intron 30.0%
! TGTTATTTATTAGCAGTGGT+GGG + chr1_3:56430918-56430937 Msa0127200:intron 30.0%
!! TATTTTAAATTCCTTGGTGG+AGG + chr1_3:56431067-56431086 Msa0127200:intron 30.0%
GAACATTAAACTTAACCATC+AGG - chr1_3:56431521-56431540 None:intergenic 30.0%
CATCACATACACAAAAGTAA+GGG - chr1_3:56431727-56431746 None:intergenic 30.0%
AGAACACCCTTAACATTAAA+TGG + chr1_3:56431819-56431838 Msa0127200:CDS 30.0%
AAATGGAATAATACATCCCA+CGG + chr1_3:56431836-56431855 Msa0127200:CDS 30.0%
! GAATATTTTCCATATCCAGA+TGG - chr1_3:56431917-56431936 None:intergenic 30.0%
TCTGGATATGGAAAATATTC+TGG + chr1_3:56431917-56431936 Msa0127200:CDS 30.0%
GAGAACACTAACAGTTATTA+TGG + chr1_3:56431941-56431960 Msa0127200:CDS 30.0%
TGCTTTAGTATTCCACTTTA+GGG - chr1_3:56432221-56432240 None:intergenic 30.0%
! AATACTAAAGCACCTGTAAA+TGG + chr1_3:56432229-56432248 Msa0127200:CDS 30.0%
TTCTTTATCTGCTTATGATG+AGG - chr1_3:56432295-56432314 None:intergenic 30.0%
TCATCATAAGCAGATAAAGA+AGG + chr1_3:56432294-56432313 Msa0127200:CDS 30.0%
TAGTTGCATAACCAATAACA+GGG + chr1_3:56432465-56432484 Msa0127200:three_prime_UTR 30.0%
! TTTTACATCTTTCTAAACCC+TGG - chr1_3:56432622-56432641 None:intergenic 30.0%
! TTCTTGGATTAGAATGTAAC+TGG + chr1_3:56432663-56432682 Msa0127200:three_prime_UTR 30.0%
GGAAATGTTAAAGATTTAGC+TGG + chr1_3:56432871-56432890 Msa0127200:three_prime_UTR 30.0%
TTCTGCATTGTATGTTTGAA+AGG + chr1_3:56432928-56432947 Msa0127200:three_prime_UTR 30.0%
! TGATAAATCGGAGGAGTATA+CGG - chr1_3:56422677-56422696 None:intergenic 35.0%
! ATTAATGAATGAGAGCGTGA+TGG + chr1_3:56422711-56422730 Msa0127200:five_prime_UTR 35.0%
TTATCGAACTCAATTCCGTT+GGG - chr1_3:56422934-56422953 None:intergenic 35.0%
! TGAGTTCGATAACTTGTACT+TGG + chr1_3:56422942-56422961 Msa0127200:CDS 35.0%
! TGTTGATCATCTCTTTTCCT+TGG + chr1_3:56423145-56423164 Msa0127200:CDS 35.0%
ATTAACATCACTCGTTGTAG+TGG + chr1_3:56423243-56423262 Msa0127200:intron 35.0%
TTGTTCAACCGTAGTTGAAT+TGG + chr1_3:56423391-56423410 Msa0127200:intron 35.0%
!! TTTTAAAAACCAGACGGAAC+CGG - chr1_3:56423525-56423544 None:intergenic 35.0%
!!! GCAGTGTTTTAAAAACCAGA+CGG - chr1_3:56423531-56423550 None:intergenic 35.0%
AAAACACTGCATTAAAGAGG+TGG + chr1_3:56423541-56423560 Msa0127200:intron 35.0%
AAACACTGCATTAAAGAGGT+GGG + chr1_3:56423542-56423561 Msa0127200:intron 35.0%
TTGACAAACATCCACCAATT+GGG + chr1_3:56423565-56423584 Msa0127200:intron 35.0%
!!! AAATGTTTTGGGATCCCAAT+TGG - chr1_3:56423582-56423601 None:intergenic 35.0%
!! TTTGTCCTTAAGGCTTTGTT+TGG + chr1_3:56423683-56423702 Msa0127200:intron 35.0%
!! TTGTCCTTAAGGCTTTGTTT+GGG + chr1_3:56423684-56423703 Msa0127200:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr1_3:56423903-56423922 None:intergenic 35.0%
!!! TTTTTGAGTTTCCCCAAATG+AGG + chr1_3:56423915-56423934 Msa0127200:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - chr1_3:56423981-56424000 None:intergenic 35.0%
!! AGGGCTTTGAAAAAAAAGGA+AGG + chr1_3:56424086-56424105 Msa0127200:intron 35.0%
! AAGGAAGAAATAGAGGGTTT+TGG + chr1_3:56424105-56424124 Msa0127200:intron 35.0%
CATAAAATCCCCCTAATTTG+GGG + chr1_3:56424164-56424183 Msa0127200:intron 35.0%
ATAAAATCCCCCTAATTTGG+GGG + chr1_3:56424165-56424184 Msa0127200:intron 35.0%
!!! TTTTTAGCTCCCCCAAATTA+GGG - chr1_3:56424177-56424196 None:intergenic 35.0%
!!! TTTTTTAGCTCCCCCAAATT+AGG - chr1_3:56424178-56424197 None:intergenic 35.0%
AAGACTCTTAGACTCTGTTT+GGG - chr1_3:56424363-56424382 None:intergenic 35.0%
TAAGACTCTTAGACTCTGTT+TGG - chr1_3:56424364-56424383 None:intergenic 35.0%
! GACAGTGAGATTTTATGCTA+TGG - chr1_3:56424390-56424409 None:intergenic 35.0%
TGACAAGGAACATGTAAAGA+CGG - chr1_3:56424412-56424431 None:intergenic 35.0%
CAAGAAAAGTAAGTGTGACA+AGG - chr1_3:56424427-56424446 None:intergenic 35.0%
ACAGGATACAAAAGCTACAA+GGG - chr1_3:56424450-56424469 None:intergenic 35.0%
AACAGGATACAAAAGCTACA+AGG - chr1_3:56424451-56424470 None:intergenic 35.0%
!!! TTCTCGTACTTTTTTGCTGA+AGG + chr1_3:56424601-56424620 Msa0127200:intron 35.0%
TACCCCTGGTACTAAATTTA+TGG + chr1_3:56424749-56424768 Msa0127200:CDS 35.0%
TGCCATAAATTTAGTACCAG+GGG - chr1_3:56424754-56424773 None:intergenic 35.0%
GATGCCATAAATTTAGTACC+AGG - chr1_3:56424756-56424775 None:intergenic 35.0%
! CCTTTATATTTTTCCAGGCA+GGG - chr1_3:56424827-56424846 None:intergenic 35.0%
! ACCTTTATATTTTTCCAGGC+AGG - chr1_3:56424828-56424847 None:intergenic 35.0%
AAGCGGCATAAACAATAGAT+AGG - chr1_3:56424870-56424889 None:intergenic 35.0%
CCTGAAAGCCAGATATATAT+GGG - chr1_3:56424951-56424970 None:intergenic 35.0%
TCCTGAAAGCCAGATATATA+TGG - chr1_3:56424952-56424971 None:intergenic 35.0%
!!! TGCTGATTTTATCCTTTCCT+TGG + chr1_3:56425189-56425208 Msa0127200:intron 35.0%
TCAGTGAAAAAACCAAGGAA+AGG - chr1_3:56425204-56425223 None:intergenic 35.0%
AGGTTCACTTCTCAATATTG+AGG + chr1_3:56425281-56425300 Msa0127200:CDS 35.0%
GGTTCACTTCTCAATATTGA+GGG + chr1_3:56425282-56425301 Msa0127200:CDS 35.0%
CATCTTGACAATTCACACAT+TGG - chr1_3:56425318-56425337 None:intergenic 35.0%
TCAAATGATCAATCACCTGA+TGG + chr1_3:56425371-56425390 Msa0127200:intron 35.0%
AAAGTAATTACCTGTCCATC+AGG - chr1_3:56425389-56425408 None:intergenic 35.0%
ACAAAACACTTATCTTGTCC+AGG - chr1_3:56425413-56425432 None:intergenic 35.0%
! CAAGATAAGTGTTTTGTGTG+TGG + chr1_3:56425416-56425435 Msa0127200:CDS 35.0%
GAAATATCAGGTTTGAGGAT+TGG + chr1_3:56425532-56425551 Msa0127200:intron 35.0%
CAAAGTCAATCTCAAAAGGA+GGG - chr1_3:56425689-56425708 None:intergenic 35.0%
TCAAAGTCAATCTCAAAAGG+AGG - chr1_3:56425690-56425709 None:intergenic 35.0%
CGTTCAAAGTCAATCTCAAA+AGG - chr1_3:56425693-56425712 None:intergenic 35.0%
! GTATTTCTGTGCTTCTTTGT+CGG + chr1_3:56425729-56425748 Msa0127200:CDS 35.0%
ATCTCTAATGTTGGCATATG+AGG - chr1_3:56425768-56425787 None:intergenic 35.0%
GTAGGAAGACAAATATGCAA+TGG - chr1_3:56425927-56425946 None:intergenic 35.0%
ATAAGTAAGATAACCACCCA+TGG - chr1_3:56426042-56426061 None:intergenic 35.0%
CAGTTGCTTATACTGTACTT+TGG + chr1_3:56426175-56426194 Msa0127200:intron 35.0%
CTACTCTATCTAAGAAAACC+TGG - chr1_3:56426276-56426295 None:intergenic 35.0%
GATTTGATCTTCATGAACAG+CGG - chr1_3:56426317-56426336 None:intergenic 35.0%
GGTTTGTAAACTGATATGCA+TGG + chr1_3:56426383-56426402 Msa0127200:intron 35.0%
ATAATGAAGAGATGAGAGCT+AGG + chr1_3:56426485-56426504 Msa0127200:CDS 35.0%
TAATGAAGAGATGAGAGCTA+GGG + chr1_3:56426486-56426505 Msa0127200:CDS 35.0%
CTGAACCTTATCAGAAAATG+AGG - chr1_3:56426542-56426561 None:intergenic 35.0%
! CTCCACCAGAATAATTTTTC+TGG + chr1_3:56426651-56426670 Msa0127200:intron 35.0%
GATTGCCAAAGTAATTCTAC+TGG + chr1_3:56426673-56426692 Msa0127200:intron 35.0%
GAACACCAGTAGAATTACTT+TGG - chr1_3:56426681-56426700 None:intergenic 35.0%
CATAAGCAATCTAGAAATCC+TGG + chr1_3:56426726-56426745 Msa0127200:intron 35.0%
! ATTTTCTCAGGTCAAGTTAG+GGG + chr1_3:56426780-56426799 Msa0127200:intron 35.0%
TAATACCTTTCCTTGTATCC+AGG - chr1_3:56426808-56426827 None:intergenic 35.0%
TACATTGCATGCTTGTATGT+TGG + chr1_3:56426953-56426972 Msa0127200:intron 35.0%
CTCAAAAAGCTGACGTTATT+AGG - chr1_3:56427049-56427068 None:intergenic 35.0%
GGCTCTTTAGATTAGAAGTT+TGG - chr1_3:56427181-56427200 None:intergenic 35.0%
ATCATCTACCATAAAAGCTC+AGG - chr1_3:56427267-56427286 None:intergenic 35.0%
ACGAAGATGTTGTCATTGTA+TGG + chr1_3:56427436-56427455 Msa0127200:intron 35.0%
CGAAGATGTTGTCATTGTAT+GGG + chr1_3:56427437-56427456 Msa0127200:intron 35.0%
! ACCTAATGACAACTTTTTGC+TGG + chr1_3:56427501-56427520 Msa0127200:intron 35.0%
TCCAGCAAAAAGTTGTCATT+AGG - chr1_3:56427505-56427524 None:intergenic 35.0%
AGAAATTAATGAGAACGAGC+AGG - chr1_3:56427638-56427657 None:intergenic 35.0%
TGCTCGTTCTCATTAATTTC+TGG + chr1_3:56427637-56427656 Msa0127200:intron 35.0%
! ATTGTCTTTGTTGTCCTTGT+AGG + chr1_3:56427691-56427710 Msa0127200:intron 35.0%
AATACTGGCAAATCCAACAA+AGG - chr1_3:56427736-56427755 None:intergenic 35.0%
ATTATAACGGTGTATGCTCA+TGG + chr1_3:56427756-56427775 Msa0127200:CDS 35.0%
TCCAGTTTAACTGAGTAGTT+GGG - chr1_3:56428006-56428025 None:intergenic 35.0%
ATCCAGTTTAACTGAGTAGT+TGG - chr1_3:56428007-56428026 None:intergenic 35.0%
ACATGCCTATCCATTATACT+AGG - chr1_3:56428070-56428089 None:intergenic 35.0%
AAAGGAGTTAGGATAAAGAG+GGG + chr1_3:56428166-56428185 Msa0127200:intron 35.0%
TGTCAACAGTTAGTTAACAG+AGG + chr1_3:56428222-56428241 Msa0127200:intron 35.0%
ACAGTTAGTTAACAGAGGTT+TGG + chr1_3:56428227-56428246 Msa0127200:intron 35.0%
CAGTTAGTTAACAGAGGTTT+GGG + chr1_3:56428228-56428247 Msa0127200:intron 35.0%
TTGGGACCAAAGCTATTAAA+AGG + chr1_3:56428246-56428265 Msa0127200:intron 35.0%
ATACTCGAAACCTAGGTAAT+TGG - chr1_3:56428343-56428362 None:intergenic 35.0%
TGGCAATTCAACTAAAACGA+AGG - chr1_3:56428648-56428667 None:intergenic 35.0%
! CAAAAGGAGCATAATGATAC+GGG - chr1_3:56428733-56428752 None:intergenic 35.0%
! GCAAAAGGAGCATAATGATA+CGG - chr1_3:56428734-56428753 None:intergenic 35.0%
AGCTGATCAAATGGTTTGAA+TGG - chr1_3:56428809-56428828 None:intergenic 35.0%
CAAACCATTTGATCAGCTTA+TGG + chr1_3:56428811-56428830 Msa0127200:CDS 35.0%
AACCATTTGATCAGCTTATG+GGG + chr1_3:56428813-56428832 Msa0127200:CDS 35.0%
TGAATGGAAAACGATTTGCA+TGG + chr1_3:56429110-56429129 Msa0127200:CDS 35.0%
!!! TAGTTTTGGGGATTCTTTTC+AGG + chr1_3:56429206-56429225 Msa0127200:intron 35.0%
!!! AGTTTTGGGGATTCTTTTCA+GGG + chr1_3:56429207-56429226 Msa0127200:intron 35.0%
GAAGCTTGAAGACACATTAA+CGG + chr1_3:56429281-56429300 Msa0127200:CDS 35.0%
!!! CGGTAAGTTTTATTTGTGTG+TGG + chr1_3:56429301-56429320 Msa0127200:intron 35.0%
!!! CAACGTCGTTTTAAGAAAAG+GGG - chr1_3:56429550-56429569 None:intergenic 35.0%
!!! CACAACGTCGTTTTAAGAAA+AGG - chr1_3:56429552-56429571 None:intergenic 35.0%
! CTTTTCACGTGTTGTATTGT+AGG - chr1_3:56429586-56429605 None:intergenic 35.0%
!!! CGAGGTTTTTTTTAGACGTT+TGG + chr1_3:56429677-56429696 Msa0127200:intron 35.0%
GAGGTTACAAGATCGTAAAT+CGG - chr1_3:56430116-56430135 None:intergenic 35.0%
!!! ATTTTGACTACCTTGGAAGA+GGG + chr1_3:56430160-56430179 Msa0127200:intron 35.0%
AACCAGTCATCCAAAATTGT+TGG + chr1_3:56430196-56430215 Msa0127200:intron 35.0%
TCAAAAAATGAGTTGCCTGA+AGG + chr1_3:56430372-56430391 Msa0127200:intron 35.0%
TGAAACACATCTTTCATGAG+TGG - chr1_3:56430801-56430820 None:intergenic 35.0%
AACCTAGCATTTGCGTTAAT+TGG - chr1_3:56430824-56430843 None:intergenic 35.0%
AATTAACGCAAATGCTAGGT+TGG + chr1_3:56430823-56430842 Msa0127200:intron 35.0%
! TCGCTGTTATTTATTAGCAG+TGG + chr1_3:56430914-56430933 Msa0127200:intron 35.0%
! CTGTTATTTATTAGCAGTGG+TGG + chr1_3:56430917-56430936 Msa0127200:intron 35.0%
TGGGATGAATGGATATCTTT+GGG + chr1_3:56430937-56430956 Msa0127200:CDS 35.0%
ATATCTGGCAATCCATCAAT+GGG - chr1_3:56431001-56431020 None:intergenic 35.0%
ACTTGATTACTCTCGATATC+TGG - chr1_3:56431016-56431035 None:intergenic 35.0%
TATCTCAATCCTTGTAGACA+TGG + chr1_3:56431128-56431147 Msa0127200:CDS 35.0%
! CAGCATATGCAAACCTTTTT+GGG - chr1_3:56431188-56431207 None:intergenic 35.0%
! TCAGCATATGCAAACCTTTT+TGG - chr1_3:56431189-56431208 None:intergenic 35.0%
TGAACCAATAAACCTTAAGC+AGG - chr1_3:56431225-56431244 None:intergenic 35.0%
CAGTTACAACTTCATCTACT+GGG - chr1_3:56431262-56431281 None:intergenic 35.0%
ACAGTTACAACTTCATCTAC+TGG - chr1_3:56431263-56431282 None:intergenic 35.0%
ATAATACAACTGATCCAGGA+AGG - chr1_3:56431357-56431376 None:intergenic 35.0%
CTGTATAATACAACTGATCC+AGG - chr1_3:56431361-56431380 None:intergenic 35.0%
TAGAACTATGTGATACCTGA+TGG + chr1_3:56431503-56431522 Msa0127200:intron 35.0%
! ATATTGGCACCATTTTCACA+TGG - chr1_3:56431543-56431562 None:intergenic 35.0%
CAGATGACTACGACTTATAT+TGG - chr1_3:56431559-56431578 None:intergenic 35.0%
ATGCTAGCACTTCTCTATTA+TGG - chr1_3:56431585-56431604 None:intergenic 35.0%
ATGAAAAATCAATGTTGGGG+AGG + chr1_3:56431641-56431660 Msa0127200:intron 35.0%
GCATCACATACACAAAAGTA+AGG - chr1_3:56431728-56431747 None:intergenic 35.0%
GCAATAACTGGATCTCAATT+AGG + chr1_3:56431773-56431792 Msa0127200:CDS 35.0%
!! ATTGGAACCTGTTTGTTGTA+TGG - chr1_3:56431886-56431905 None:intergenic 35.0%
TATGGAGAACATAATCACCA+TGG + chr1_3:56431959-56431978 Msa0127200:CDS 35.0%
AGTTCCAAAATGTGAAGACT+GGG + chr1_3:56432077-56432096 Msa0127200:CDS 35.0%
! AAAACCCAGTCTTCACATTT+TGG - chr1_3:56432084-56432103 None:intergenic 35.0%
! TGGGTTTTCTGCTTTAACAA+TGG + chr1_3:56432096-56432115 Msa0127200:CDS 35.0%
! GTTTTCTGCTTTAACAATGG+AGG + chr1_3:56432099-56432118 Msa0127200:CDS 35.0%
GCTTTAGTATTCCACTTTAG+GGG - chr1_3:56432220-56432239 None:intergenic 35.0%
GTGCTTTAGTATTCCACTTT+AGG - chr1_3:56432222-56432241 None:intergenic 35.0%
CTAGGATACATTCCATTTAC+AGG - chr1_3:56432244-56432263 None:intergenic 35.0%
CTGTAAATGGAATGTATCCT+AGG + chr1_3:56432242-56432261 Msa0127200:CDS 35.0%
! CACTATTGATTACCAGAATC+TGG - chr1_3:56432355-56432374 None:intergenic 35.0%
CAGATTCTGGTAATCAATAG+TGG + chr1_3:56432353-56432372 Msa0127200:CDS 35.0%
ATTCTGGTAATCAATAGTGG+TGG + chr1_3:56432356-56432375 Msa0127200:exon 35.0%
TAATCAATAGTGGTGGTTGT+GGG + chr1_3:56432363-56432382 Msa0127200:exon 35.0%
! CTGTTATTGGTTATGCAACT+AGG - chr1_3:56432466-56432485 None:intergenic 35.0%
CTAGTTGCATAACCAATAAC+AGG + chr1_3:56432464-56432483 Msa0127200:three_prime_UTR 35.0%
AGTTGCATAACCAATAACAG+GGG + chr1_3:56432466-56432485 Msa0127200:three_prime_UTR 35.0%
CTGTCAAATGAATCACATCA+GGG - chr1_3:56432504-56432523 None:intergenic 35.0%
TCTGTCAAATGAATCACATC+AGG - chr1_3:56432505-56432524 None:intergenic 35.0%
!! TGATTTGCATTGGTTTGACA+TGG + chr1_3:56432578-56432597 Msa0127200:three_prime_UTR 35.0%
GAACATCAAATTGTGGGTAT+AGG + chr1_3:56432700-56432719 Msa0127200:three_prime_UTR 35.0%
GTATAGGAATTTAGCGCAAT+TGG + chr1_3:56432716-56432735 Msa0127200:three_prime_UTR 35.0%
TAGAATTTGACAAGCGTAGT+AGG + chr1_3:56432849-56432868 Msa0127200:three_prime_UTR 35.0%
AGAATTTGACAAGCGTAGTA+GGG + chr1_3:56432850-56432869 Msa0127200:three_prime_UTR 35.0%
GTTAAAGATTTAGCTGGGAT+TGG + chr1_3:56432877-56432896 Msa0127200:three_prime_UTR 35.0%
CATACAATGCAGAATACAGA+TGG - chr1_3:56432922-56432941 None:intergenic 35.0%
ACTCCTCCGATTTATCAAAG+TGG + chr1_3:56422680-56422699 Msa0127200:five_prime_UTR 40.0%
CAACCACTTTGATAAATCGG+AGG - chr1_3:56422686-56422705 None:intergenic 40.0%
AACTCAATTCCGTTGGGATT+GGG - chr1_3:56422928-56422947 None:intergenic 40.0%
GTTATCGAACTCAATTCCGT+TGG - chr1_3:56422935-56422954 None:intergenic 40.0%
TAGTACAAACCTTGCCATCA+GGG - chr1_3:56422999-56423018 None:intergenic 40.0%
AAGCTTCTTTACCTTGCAAC+TGG + chr1_3:56423179-56423198 Msa0127200:CDS 40.0%
AGTCATACATACCAGTTGCA+AGG - chr1_3:56423193-56423212 None:intergenic 40.0%
CAAGTTAAACCATGACCCAA+AGG - chr1_3:56423374-56423393 None:intergenic 40.0%
TGGAACCAACTGTAGTACAA+TGG + chr1_3:56423459-56423478 Msa0127200:intron 40.0%
GATCTCCATTGTACTACAGT+TGG - chr1_3:56423467-56423486 None:intergenic 40.0%
ACAATGGAGATCAAACCAAC+CGG + chr1_3:56423475-56423494 Msa0127200:intron 40.0%
GTTGACAAACATCCACCAAT+TGG + chr1_3:56423564-56423583 Msa0127200:intron 40.0%
AACTCCCAAACAAAGCCTTA+AGG - chr1_3:56423691-56423710 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr1_3:56423691-56423710 Msa0127200:intron 40.0%
! CTTTGGGGGTGGATAAAATA+TGG + chr1_3:56423728-56423747 Msa0127200:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_3:56423896-56423915 None:intergenic 40.0%
ATACAAACCCACCTCATTTG+GGG - chr1_3:56423929-56423948 None:intergenic 40.0%
GATACAAACCCACCTCATTT+GGG - chr1_3:56423930-56423949 None:intergenic 40.0%
TGATACAAACCCACCTCATT+TGG - chr1_3:56423931-56423950 None:intergenic 40.0%
AAGGGTTTGGCAAAAAAGGA+AGG - chr1_3:56424015-56424034 None:intergenic 40.0%
!!! GAAATAGAGGGTTTTGGAAG+AGG + chr1_3:56424111-56424130 Msa0127200:intron 40.0%
!!! TTTTAGCTCCCCCAAATTAG+GGG - chr1_3:56424176-56424195 None:intergenic 40.0%
!! AGAGGATTTTTGAAGGTCTG+TGG + chr1_3:56424208-56424227 Msa0127200:intron 40.0%
!! GAGGATTTTTGAAGGTCTGT+GGG + chr1_3:56424209-56424228 Msa0127200:intron 40.0%
CAAAATCCCTCTCTCAGAAA+AGG + chr1_3:56424278-56424297 Msa0127200:intron 40.0%
!! CTTTCACCTTTTCTGAGAGA+GGG - chr1_3:56424287-56424306 None:intergenic 40.0%
TTAGACTCTGTTTGGGAGTT+TGG - chr1_3:56424356-56424375 None:intergenic 40.0%
!!! TGCTGATTCATTTTGGCTCT+TGG - chr1_3:56424506-56424525 None:intergenic 40.0%
!!! GGAACGTTGCTGATTCATTT+TGG - chr1_3:56424513-56424532 None:intergenic 40.0%
AAATGAATCAGCAACGTTCC+CGG + chr1_3:56424513-56424532 Msa0127200:CDS 40.0%
TGCTCATGTGTAAGCATTAC+AGG + chr1_3:56424632-56424651 Msa0127200:intron 40.0%
! ACATTTGAGTCTGAAGTCTC+AGG - chr1_3:56424726-56424745 None:intergenic 40.0%
ATTTATGGCATCTCTGTCAG+TGG + chr1_3:56424764-56424783 Msa0127200:CDS 40.0%
CCCTGCCTGGAAAAATATAA+AGG + chr1_3:56424824-56424843 Msa0127200:CDS 40.0%
AGGAATCATCCCAACTTGAA+AGG - chr1_3:56424896-56424915 None:intergenic 40.0%
TTGGGATGATTCCTTTCTTG+TGG + chr1_3:56424902-56424921 Msa0127200:intron 40.0%
!! CCCATATATATCTGGCTTTC+AGG + chr1_3:56424948-56424967 Msa0127200:intron 40.0%
! CTTTCTGATTCGAATGTTCC+TGG + chr1_3:56425034-56425053 Msa0127200:CDS 40.0%
! ATTTTATGTTCTCCCTCACC+AGG - chr1_3:56425055-56425074 None:intergenic 40.0%
CAGGAATGTTACGTTGTAAC+CGG - chr1_3:56425090-56425109 None:intergenic 40.0%
TGAGTATTCGGATTGAAACC+AGG - chr1_3:56425109-56425128 None:intergenic 40.0%
GCATAATCAAATCAGCATCC+TGG - chr1_3:56425243-56425262 None:intergenic 40.0%
TATTGAGAAGTGAACCTCGT+GGG - chr1_3:56425278-56425297 None:intergenic 40.0%
ATATTGAGAAGTGAACCTCG+TGG - chr1_3:56425279-56425298 None:intergenic 40.0%
TCACTTCTCAATATTGAGGG+AGG + chr1_3:56425285-56425304 Msa0127200:CDS 40.0%
GGACAGGTAATTACTTTACC+TGG + chr1_3:56425392-56425411 Msa0127200:intron 40.0%
CATGACAATCAGCTGCAAAA+TGG - chr1_3:56425451-56425470 None:intergenic 40.0%
! CATTTTGCAGCTGATTGTCA+TGG + chr1_3:56425449-56425468 Msa0127200:CDS 40.0%
TAAGCCAGAAACTAAAGCTG+AGG + chr1_3:56425472-56425491 Msa0127200:CDS 40.0%
TCAATCTCAAAAGGAGGGTT+GGG - chr1_3:56425684-56425703 None:intergenic 40.0%
! GATTGACTTTGAACGAGTAG+TGG + chr1_3:56425698-56425717 Msa0127200:CDS 40.0%
ACCTCTCTGATCTCTAATGT+TGG - chr1_3:56425777-56425796 None:intergenic 40.0%
TAGAAAGGAATTCACTGCCA+TGG + chr1_3:56426022-56426041 Msa0127200:CDS 40.0%
AGAAAGGAATTCACTGCCAT+GGG + chr1_3:56426023-56426042 Msa0127200:CDS 40.0%
GGGTGGTTATCTTACTTATG+CGG + chr1_3:56426043-56426062 Msa0127200:CDS 40.0%
GGTGGTTATCTTACTTATGC+GGG + chr1_3:56426044-56426063 Msa0127200:CDS 40.0%
TTATCTTACTTATGCGGGTG+AGG + chr1_3:56426049-56426068 Msa0127200:CDS 40.0%
!! GGACTGTGTGTTACTTTCAT+AGG + chr1_3:56426404-56426423 Msa0127200:intron 40.0%
GAGTAATACTTCAAGAGCCA+CGG + chr1_3:56426515-56426534 Msa0127200:CDS 40.0%
AGTAATACTTCAAGAGCCAC+GGG + chr1_3:56426516-56426535 Msa0127200:CDS 40.0%
CAAGTTACTCGTGCATGTTT+GGG - chr1_3:56426703-56426722 None:intergenic 40.0%
!! AAAGTTTGGTGCATCAAGTC+TGG + chr1_3:56426834-56426853 Msa0127200:CDS 40.0%
! CCATAAAAGCTCAGGCTTTT+AGG - chr1_3:56427259-56427278 None:intergenic 40.0%
! CCTAAAAGCCTGAGCTTTTA+TGG + chr1_3:56427256-56427275 Msa0127200:intron 40.0%
! AGTGTCACTGTCAAAGATAC+AGG - chr1_3:56427350-56427369 None:intergenic 40.0%
! TGGGTTAGATCAGTTGATAC+TGG + chr1_3:56427456-56427475 Msa0127200:intron 40.0%
TCCAATGTAGGGTTCAGATT+AGG + chr1_3:56427541-56427560 Msa0127200:intron 40.0%
AATATGTGGAAGGCCTTTGT+TGG + chr1_3:56427720-56427739 Msa0127200:CDS 40.0%
! ACATAGCAGCCAACAAGTTT+TGG + chr1_3:56427906-56427925 Msa0127200:intron 40.0%
AATTGTCCGCCAAAACTTGT+TGG - chr1_3:56427918-56427937 None:intergenic 40.0%
TGGATAGGCATGTATTAAGG+CGG + chr1_3:56428077-56428096 Msa0127200:intron 40.0%
GGACCAAAGCTATTAAAAGG+AGG + chr1_3:56428249-56428268 Msa0127200:intron 40.0%
AAGGAGTTAGTCGAGATTTC+TGG + chr1_3:56428285-56428304 Msa0127200:intron 40.0%
!!! TTTCTGGAGTTGTTTTACGG+AGG + chr1_3:56428301-56428320 Msa0127200:intron 40.0%
!!! TTCTGGAGTTGTTTTACGGA+GGG + chr1_3:56428302-56428321 Msa0127200:intron 40.0%
TGACAGAATACTCGAAACCT+AGG - chr1_3:56428350-56428369 None:intergenic 40.0%
AGTGAGTCGGACTTGATAAA+TGG + chr1_3:56428464-56428483 Msa0127200:intron 40.0%
CACACACGTTAGAAAGATGA+TGG - chr1_3:56428509-56428528 None:intergenic 40.0%
ATAATGATACGGGTAGTACC+TGG - chr1_3:56428723-56428742 None:intergenic 40.0%
ACCATTTGATCAGCTTATGG+GGG + chr1_3:56428814-56428833 Msa0127200:CDS 40.0%
ATGCACTGCCTGACAAATAT+AGG + chr1_3:56428936-56428955 Msa0127200:CDS 40.0%
TGCACTGCCTGACAAATATA+GGG + chr1_3:56428937-56428956 Msa0127200:CDS 40.0%
GCAGGGTAGAAGTGAAAAAT+AGG - chr1_3:56428986-56429005 None:intergenic 40.0%
! ATTTTTCACTTCTACCCTGC+TGG + chr1_3:56428986-56429005 Msa0127200:CDS 40.0%
AGAAATTGCTTGCTTCCACA+AGG + chr1_3:56429259-56429278 Msa0127200:CDS 40.0%
TTTATTTGTGTGTGGAAGGG+AGG + chr1_3:56429309-56429328 Msa0127200:intron 40.0%
TTATTTGTGTGTGGAAGGGA+GGG + chr1_3:56429310-56429329 Msa0127200:intron 40.0%
ATCTGTAAAATCGTACGCGT+CGG + chr1_3:56429473-56429492 Msa0127200:intron 40.0%
!!! TGTTTTTTTGTCATACGCCG+AGG + chr1_3:56429659-56429678 Msa0127200:intron 40.0%
!! TGTCGATTTGTGAATTTGGC+AGG + chr1_3:56430065-56430084 Msa0127200:intron 40.0%
TAAATCGGAGGATCGTAACA+CGG - chr1_3:56430101-56430120 None:intergenic 40.0%
GTTACAAGATCGTAAATCGG+AGG - chr1_3:56430113-56430132 None:intergenic 40.0%
GTAGTCAAAATCGAGATCCT+AGG - chr1_3:56430151-56430170 None:intergenic 40.0%
!!! GATCTCGATTTTGACTACCT+TGG + chr1_3:56430153-56430172 Msa0127200:intron 40.0%
!!! GATTTTGACTACCTTGGAAG+AGG + chr1_3:56430159-56430178 Msa0127200:intron 40.0%
!! TTTTGACTACCTTGGAAGAG+GGG + chr1_3:56430161-56430180 Msa0127200:intron 40.0%
!!! GTATTTTTTCTGGCAATCGC+TGG + chr1_3:56430517-56430536 Msa0127200:intron 40.0%
TGGCTAATCGACCAAAAACT+TGG - chr1_3:56430781-56430800 None:intergenic 40.0%
CACCAATTAACGCAAATGCT+AGG + chr1_3:56430819-56430838 Msa0127200:CDS 40.0%
GTGGGATGAATGGATATCTT+TGG + chr1_3:56430936-56430955 Msa0127200:CDS 40.0%
GATATCTGGCAATCCATCAA+TGG - chr1_3:56431002-56431021 None:intergenic 40.0%
TGGTGTAGTGATACCCAAAA+AGG + chr1_3:56431172-56431191 Msa0127200:CDS 40.0%
CTTAAGCAGGATGCTAAGTA+AGG - chr1_3:56431212-56431231 None:intergenic 40.0%
CTTACTTAGCATCCTGCTTA+AGG + chr1_3:56431210-56431229 Msa0127200:intron 40.0%
GCATCCTGCTTAAGGTTTAT+TGG + chr1_3:56431218-56431237 Msa0127200:intron 40.0%
ACCTAATTGCGGCAATAACT+AGG + chr1_3:56431302-56431321 Msa0127200:intron 40.0%
CTTTGGCATGAAGACAATGT+TGG + chr1_3:56431450-56431469 Msa0127200:CDS 40.0%
GTGTATGTGATGCATCTGAT+AGG + chr1_3:56431735-56431754 Msa0127200:intron 40.0%
TCTGATAGGTCACAAGTATC+TGG + chr1_3:56431749-56431768 Msa0127200:intron 40.0%
! CAAGTATCTGGAGCAATAAC+TGG + chr1_3:56431761-56431780 Msa0127200:CDS 40.0%
TATCCAGTCTCATCTAATGC+TGG + chr1_3:56432001-56432020 Msa0127200:CDS 40.0%
ATCCAGTCTCATCTAATGCT+GGG + chr1_3:56432002-56432021 Msa0127200:CDS 40.0%
TTAGAACACAAGATAGGCCA+AGG + chr1_3:56432044-56432063 Msa0127200:CDS 40.0%
CAGTTCCAAAATGTGAAGAC+TGG + chr1_3:56432076-56432095 Msa0127200:CDS 40.0%
TCTGCTTTAACAATGGAGGA+AGG + chr1_3:56432103-56432122 Msa0127200:CDS 40.0%
TTGGTTGTTGGTCCAGAAAT+TGG - chr1_3:56432154-56432173 None:intergenic 40.0%
!! CACAAATCGGGGTTCTAAAT+TGG - chr1_3:56432173-56432192 None:intergenic 40.0%
! ACCAGAATCTGGAGTTTCTT+GGG - chr1_3:56432344-56432363 None:intergenic 40.0%
! TACCAGAATCTGGAGTTTCT+TGG - chr1_3:56432345-56432364 None:intergenic 40.0%
GTAATCAATAGTGGTGGTTG+TGG + chr1_3:56432362-56432381 Msa0127200:exon 40.0%
TTATGCAACTAGGATACAGG+TGG - chr1_3:56432456-56432475 None:intergenic 40.0%
TGGTTATGCAACTAGGATAC+AGG - chr1_3:56432459-56432478 None:intergenic 40.0%
TGTGTGATGATTAGATGCAG+TGG + chr1_3:56432544-56432563 Msa0127200:three_prime_UTR 40.0%
! TACCTCAATGATAGTGTTCC+AGG + chr1_3:56432601-56432620 Msa0127200:three_prime_UTR 40.0%
! ACCTCAATGATAGTGTTCCA+GGG + chr1_3:56432602-56432621 Msa0127200:three_prime_UTR 40.0%
AGAATGTAACTGGTGTAAGC+CGG + chr1_3:56432673-56432692 Msa0127200:three_prime_UTR 40.0%
CACAATTTGATGTTCTCCAC+CGG - chr1_3:56432695-56432714 None:intergenic 40.0%
GGTGGAGAACATCAAATTGT+GGG + chr1_3:56432694-56432713 Msa0127200:three_prime_UTR 40.0%
TGTATTCCGTGTGTAAAGTC+TGG + chr1_3:56432770-56432789 Msa0127200:three_prime_UTR 40.0%
ACAATGCAGAATACAGATGG+TGG - chr1_3:56432919-56432938 None:intergenic 40.0%
AGTAAGCGTCACCAACACTA+TGG + chr1_3:56422801-56422820 Msa0127200:exon 45.0%
GTAAGCGTCACCAACACTAT+GGG + chr1_3:56422802-56422821 Msa0127200:exon 45.0%
TAAGCGTCACCAACACTATG+GGG + chr1_3:56422803-56422822 Msa0127200:exon 45.0%
!! TGGGTTTAGAAGCGTCGATA+GGG - chr1_3:56422909-56422928 None:intergenic 45.0%
!! TTGGGTTTAGAAGCGTCGAT+AGG - chr1_3:56422910-56422929 None:intergenic 45.0%
GCTTCTAAACCCAATCCCAA+CGG + chr1_3:56422916-56422935 Msa0127200:CDS 45.0%
GAACTCAATTCCGTTGGGAT+TGG - chr1_3:56422929-56422948 None:intergenic 45.0%
TGCCATCAGGGTGAAAACAA+GGG - chr1_3:56422987-56423006 None:intergenic 45.0%
TTGCCATCAGGGTGAAAACA+AGG - chr1_3:56422988-56423007 None:intergenic 45.0%
! TTGTTTTCACCCTGATGGCA+AGG + chr1_3:56422987-56423006 Msa0127200:CDS 45.0%
GTAGTACAAACCTTGCCATC+AGG - chr1_3:56423000-56423019 None:intergenic 45.0%
!! TCTTTTCCTTGGTTCGTCCA+AGG + chr1_3:56423156-56423175 Msa0127200:CDS 45.0%
GCAAGGTAAAGAAGCTTCCT+TGG - chr1_3:56423176-56423195 None:intergenic 45.0%
TAAATACCAGACCGGACCTT+TGG + chr1_3:56423355-56423374 Msa0127200:intron 45.0%
AAATACCAGACCGGACCTTT+GGG + chr1_3:56423356-56423375 Msa0127200:intron 45.0%
TAAACCATGACCCAAAGGTC+CGG - chr1_3:56423369-56423388 None:intergenic 45.0%
!!! TGTTTTGGGATCCCAATTGG+TGG - chr1_3:56423579-56423598 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_3:56423695-56423714 Msa0127200:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_3:56423696-56423715 Msa0127200:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG - chr1_3:56423892-56423911 None:intergenic 45.0%
TTGAGTTTCCCCAAATGAGG+TGG + chr1_3:56423918-56423937 Msa0127200:intron 45.0%
TGAGTTTCCCCAAATGAGGT+GGG + chr1_3:56423919-56423938 Msa0127200:intron 45.0%
TAGATGACATTGAGAGGGGA+AGG - chr1_3:56423977-56423996 None:intergenic 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG - chr1_3:56424006-56424025 None:intergenic 45.0%
AGGGAAGGGTTTGGCAAAAA+AGG - chr1_3:56424019-56424038 None:intergenic 45.0%
!! GGGGAGGGCTTTGAAAAAAA+AGG + chr1_3:56424082-56424101 Msa0127200:intron 45.0%
!!! ATAGAGGGTTTTGGAAGAGG+AGG + chr1_3:56424114-56424133 Msa0127200:intron 45.0%
!!! TAGAGGGTTTTGGAAGAGGA+GGG + chr1_3:56424115-56424134 Msa0127200:intron 45.0%
!! TTTTGGAAGAGGAGGGCTTT+GGG + chr1_3:56424122-56424141 Msa0127200:intron 45.0%
! TTTAGCTCCCCCAAATTAGG+GGG - chr1_3:56424175-56424194 None:intergenic 45.0%
!! CCTTTCACCTTTTCTGAGAG+AGG - chr1_3:56424288-56424307 None:intergenic 45.0%
CCTCTCTCAGAAAAGGTGAA+AGG + chr1_3:56424285-56424304 Msa0127200:intron 45.0%
TTTCCTCAGCCTTTCCTCTT+CGG - chr1_3:56424661-56424680 None:intergenic 45.0%
AGGAAAGAATTCGTCGAGGA+GGG + chr1_3:56424675-56424694 Msa0127200:CDS 45.0%
!!! GGGAGCACTTTTGTCTTCTA+AGG + chr1_3:56424695-56424714 Msa0127200:CDS 45.0%
GACTCAAATGTCATTACCCC+TGG + chr1_3:56424735-56424754 Msa0127200:CDS 45.0%
! TATTTTTCCAGGCAGGGTTG+TGG - chr1_3:56424821-56424840 None:intergenic 45.0%
CCCAACTTGAAAGGATCAAG+CGG - chr1_3:56424887-56424906 None:intergenic 45.0%
!! CCGCTTGATCCTTTCAAGTT+GGG + chr1_3:56424884-56424903 Msa0127200:intron 45.0%
ACGAGATCACTCCACAAGAA+AGG - chr1_3:56424916-56424935 None:intergenic 45.0%
TGATTCGAATGTTCCTGGTG+AGG + chr1_3:56425039-56425058 Msa0127200:CDS 45.0%
GATTCGAATGTTCCTGGTGA+GGG + chr1_3:56425040-56425059 Msa0127200:CDS 45.0%
CGGTTACAACGTAACATTCC+TGG + chr1_3:56425088-56425107 Msa0127200:CDS 45.0%
! TGGTGAGTTTTGCCCGAATT+TGG + chr1_3:56425146-56425165 Msa0127200:intron 45.0%
! TGATCAATCACCTGATGGAC+AGG + chr1_3:56425376-56425395 Msa0127200:intron 45.0%
! TGTTTTGTGTGTGGCCAAAC+TGG + chr1_3:56425425-56425444 Msa0127200:CDS 45.0%
CCAGAAACTAAAGCTGAGGA+CGG + chr1_3:56425476-56425495 Msa0127200:CDS 45.0%
CAGAAACTAAAGCTGAGGAC+GGG + chr1_3:56425477-56425496 Msa0127200:CDS 45.0%
CGAATAGGGATTTCATCAGC+AGG - chr1_3:56425506-56425525 None:intergenic 45.0%
GTCAATCTCAAAAGGAGGGT+TGG - chr1_3:56425685-56425704 None:intergenic 45.0%
GCCAACATTAGAGATCAGAG+AGG + chr1_3:56425773-56425792 Msa0127200:CDS 45.0%
! GAAACGAGTTCGAGTTCAAC+AGG + chr1_3:56426342-56426361 Msa0127200:CDS 45.0%
TTATCAGAAAATGAGGCCCG+TGG - chr1_3:56426535-56426554 None:intergenic 45.0%
! ACGGGCCTCATTTTCTGATA+AGG + chr1_3:56426534-56426553 Msa0127200:CDS 45.0%
GCAAGTTACTCGTGCATGTT+TGG - chr1_3:56426704-56426723 None:intergenic 45.0%
! AAAGCATCCATGACCAAGAG+AGG + chr1_3:56427092-56427111 Msa0127200:intron 45.0%
TTCAAACTCCAGACCTCTCT+TGG - chr1_3:56427108-56427127 None:intergenic 45.0%
CTAAAGAGCCATTGCATGAG+AGG + chr1_3:56427191-56427210 Msa0127200:intron 45.0%
TAACACAGCCTCTCATGCAA+TGG - chr1_3:56427202-56427221 None:intergenic 45.0%
! TGACAGTGACACTTGTTAGC+TGG + chr1_3:56427357-56427376 Msa0127200:intron 45.0%
TTGGAACAAAGGCAGAAGAG+GGG - chr1_3:56427402-56427421 None:intergenic 45.0%
CTTGGAACAAAGGCAGAAGA+GGG - chr1_3:56427403-56427422 None:intergenic 45.0%
CTCTTCTGCCTTTGTTCCAA+GGG + chr1_3:56427402-56427421 Msa0127200:intron 45.0%
AACAGACTCCCTTGGAACAA+AGG - chr1_3:56427413-56427432 None:intergenic 45.0%
TTCGTATGAACAGACTCCCT+TGG - chr1_3:56427421-56427440 None:intergenic 45.0%
GCCTAATCTGAACCCTACAT+TGG - chr1_3:56427545-56427564 None:intergenic 45.0%
CGAGCAGGATAATTGTTGTG+AGG - chr1_3:56427623-56427642 None:intergenic 45.0%
ACGGTGTATGCTCATGGAAA+TGG + chr1_3:56427762-56427781 Msa0127200:CDS 45.0%
!! TAGCAGCCAACAAGTTTTGG+CGG + chr1_3:56427909-56427928 Msa0127200:intron 45.0%
GCCCAACTACTCAGTTAAAC+TGG + chr1_3:56428002-56428021 Msa0127200:intron 45.0%
CTAGGTTCCTCCAATTACCT+AGG + chr1_3:56428330-56428349 Msa0127200:intron 45.0%
CTCGAAACCTAGGTAATTGG+AGG - chr1_3:56428340-56428359 None:intergenic 45.0%
!! CGTTAGAAAGATGATGGACC+AGG - chr1_3:56428503-56428522 None:intergenic 45.0%
! CTGGATTGCTTTGATGACTG+TGG + chr1_3:56428561-56428580 Msa0127200:intron 45.0%
ATGGTTTGAATGGCTCTCCA+GGG - chr1_3:56428799-56428818 None:intergenic 45.0%
AATGGTTTGAATGGCTCTCC+AGG - chr1_3:56428800-56428819 None:intergenic 45.0%
ACCCCCATAAGCTGATCAAA+TGG - chr1_3:56428818-56428837 None:intergenic 45.0%
TAGAGGAAGAACCTTGAAGC+AGG - chr1_3:56428845-56428864 None:intergenic 45.0%
GACAAGTTATCTCACCAGCA+GGG - chr1_3:56429003-56429022 None:intergenic 45.0%
TGGAAAACGATTTGCATGGC+AGG + chr1_3:56429114-56429133 Msa0127200:CDS 45.0%
TGTGTCTTCAAGCTTCCTTG+TGG - chr1_3:56429277-56429296 None:intergenic 45.0%
AAAATCGCGATCCAACTCGT+AGG + chr1_3:56429350-56429369 Msa0127200:intron 45.0%
AATCGTACGATCCTACGAGT+TGG - chr1_3:56429364-56429383 None:intergenic 45.0%
TGGTCGGAATCGTAATCTGA+TGG + chr1_3:56429418-56429437 Msa0127200:intron 45.0%
GGTCGGAATCGTAATCTGAT+GGG + chr1_3:56429419-56429438 Msa0127200:intron 45.0%
ACAGATTTCACGATCTTCCG+CGG - chr1_3:56429459-56429478 None:intergenic 45.0%
! CTGTGCAGAGTTGTTGTTCA+CGG + chr1_3:56429511-56429530 Msa0127200:intron 45.0%
! TGTGCAGAGTTGTTGTTCAC+GGG + chr1_3:56429512-56429531 Msa0127200:intron 45.0%
ATCGAGATCCTAGGCAAGAT+CGG - chr1_3:56430142-56430161 None:intergenic 45.0%
TTTGACTACCTTGGAAGAGG+GGG + chr1_3:56430162-56430181 Msa0127200:intron 45.0%
! GGCCAACAATTTTGGATGAC+TGG - chr1_3:56430201-56430220 None:intergenic 45.0%
GCAGCTGCAACTATTGAAGT+TGG + chr1_3:56430421-56430440 Msa0127200:intron 45.0%
! ATCGCTGGAAGCTTTTGCTT+TGG + chr1_3:56430532-56430551 Msa0127200:intron 45.0%
GTGAAGCCAAATCATGTGCA+CGG - chr1_3:56430742-56430761 None:intergenic 45.0%
!! GCTAGGTTGGTGAATGTCAA+TGG + chr1_3:56430836-56430855 Msa0127200:intron 45.0%
! ATTAGCAGTGGTGGGATGAA+TGG + chr1_3:56430926-56430945 Msa0127200:intron 45.0%
ATTGTACCGTCTCCCATTGA+TGG + chr1_3:56430986-56431005 Msa0127200:CDS 45.0%
TCATTATGAGACCTCCACCA+AGG - chr1_3:56431081-56431100 None:intergenic 45.0%
TTGGGTATCACTACACCATC+CGG - chr1_3:56431170-56431189 None:intergenic 45.0%
GCCTAGTTATTGCCGCAATT+AGG - chr1_3:56431306-56431325 None:intergenic 45.0%
TCAAACCTTCTCCTGTGCTT+TGG + chr1_3:56431433-56431452 Msa0127200:CDS 45.0%
TTGTCTTCATGCCAAAGCAC+AGG - chr1_3:56431447-56431466 None:intergenic 45.0%
GGCATGAAGACAATGTTGGT+CGG + chr1_3:56431454-56431473 Msa0127200:CDS 45.0%
GCATGAAGACAATGTTGGTC+GGG + chr1_3:56431455-56431474 Msa0127200:CDS 45.0%
CATGAAGACAATGTTGGTCG+GGG + chr1_3:56431456-56431475 Msa0127200:CDS 45.0%
TAATACATCCCACGGAGTGT+TGG + chr1_3:56431844-56431863 Msa0127200:CDS 45.0%
! TTTGTTGTATGGCGAACTGG+AGG - chr1_3:56431875-56431894 None:intergenic 45.0%
!! CTGTTTGTTGTATGGCGAAC+TGG - chr1_3:56431878-56431897 None:intergenic 45.0%
CAGTTCGCCATACAACAAAC+AGG + chr1_3:56431876-56431895 Msa0127200:CDS 45.0%
ACAAACAGGTTCCAATCAGC+TGG + chr1_3:56431890-56431909 Msa0127200:CDS 45.0%
TGGAACTGTTCTTGATGCCT+TGG - chr1_3:56432064-56432083 None:intergenic 45.0%
GTTGTTGGTCCAGAAATTGG+CGG - chr1_3:56432151-56432170 None:intergenic 45.0%
!! CGGGGTTCTAAATTGGTTGT+TGG - chr1_3:56432166-56432185 None:intergenic 45.0%
!!! GGGGCAAACGTGTTTTAACT+TGG - chr1_3:56432324-56432343 None:intergenic 45.0%
! CCAGAATCTGGAGTTTCTTG+GGG - chr1_3:56432343-56432362 None:intergenic 45.0%
! TGTGGGTCCTTTTGTGTTTG+AGG + chr1_3:56432380-56432399 Msa0127200:three_prime_UTR 45.0%
! CAAGGCACCTCAAACACAAA+AGG - chr1_3:56432390-56432409 None:intergenic 45.0%
!! CTTTTGTGTTTGAGGTGCCT+TGG + chr1_3:56432388-56432407 Msa0127200:three_prime_UTR 45.0%
GTGATGATTAGATGCAGTGG+AGG + chr1_3:56432547-56432566 Msa0127200:three_prime_UTR 45.0%
ACCCTGGAACACTATCATTG+AGG - chr1_3:56432606-56432625 None:intergenic 45.0%
CGGTGGAGAACATCAAATTG+TGG + chr1_3:56432693-56432712 Msa0127200:three_prime_UTR 45.0%
!! GCAATTGGTGTTTTGTTCCG+TGG + chr1_3:56432731-56432750 Msa0127200:three_prime_UTR 45.0%
AACAACCTAGTTCCATGCCA+CGG - chr1_3:56432751-56432770 None:intergenic 45.0%
ATTCCGTGTGTAAAGTCTGG+TGG + chr1_3:56432773-56432792 Msa0127200:three_prime_UTR 45.0%
TTCCGTGTGTAAAGTCTGGT+GGG + chr1_3:56432774-56432793 Msa0127200:three_prime_UTR 45.0%
AACCCACCAGACTTTACACA+CGG - chr1_3:56432779-56432798 None:intergenic 45.0%
!! GCAGAATACAGATGGTGGAT+GGG - chr1_3:56432914-56432933 None:intergenic 45.0%
!! TGCAGAATACAGATGGTGGA+TGG - chr1_3:56432915-56432934 None:intergenic 45.0%
!!! GTTATAATTTTATTTATTAT+TGG + chr1_3:56427788-56427807 Msa0127200:intron 5.0%
!!! TTAATTTTATTGTTTTTTAT+GGG - chr1_3:56429873-56429892 None:intergenic 5.0%
!!! ATTAATTTTATTGTTTTTTA+TGG - chr1_3:56429874-56429893 None:intergenic 5.0%
AAGCGTCACCAACACTATGG+GGG + chr1_3:56422804-56422823 Msa0127200:exon 50.0%
GATCGAGAGTGGGTAACGAT+CGG - chr1_3:56422854-56422873 None:intergenic 50.0%
!! GGGTTTAGAAGCGTCGATAG+GGG - chr1_3:56422908-56422927 None:intergenic 50.0%
!!! CACCCTTGTTTTCACCCTGA+TGG + chr1_3:56422982-56423001 Msa0127200:CDS 50.0%
AAGCTTCCTTGGACGAACCA+AGG - chr1_3:56423165-56423184 None:intergenic 50.0%
ATGGAGATCAAACCAACCGG+TGG + chr1_3:56423478-56423497 Msa0127200:intron 50.0%
!! TGACCTGTTTCGGGTTCAAC+CGG + chr1_3:56423503-56423522 Msa0127200:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_3:56423694-56423713 Msa0127200:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - chr1_3:56423893-56423912 None:intergenic 50.0%
CATTGAGAGGGGAAGGCTTT+GGG - chr1_3:56423970-56423989 None:intergenic 50.0%
ACATTGAGAGGGGAAGGCTT+TGG - chr1_3:56423971-56423990 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr1_3:56424043-56424062 None:intergenic 50.0%
TAAGGGCCTGTTTGGGAGTT+TGG - chr1_3:56424053-56424072 None:intergenic 50.0%
AAACTCCCAAACAGGCCCTT+AGG + chr1_3:56424052-56424071 Msa0127200:intron 50.0%
CAAAGCCTAAGGGCCTGTTT+GGG - chr1_3:56424060-56424079 None:intergenic 50.0%
!!! GTTTTGGAAGAGGAGGGCTT+TGG + chr1_3:56424121-56424140 Msa0127200:intron 50.0%
TTTGGAAGAGGAGGGCTTTG+GGG + chr1_3:56424123-56424142 Msa0127200:intron 50.0%
GACTCTGTTTGGGAGTTTGG+AGG - chr1_3:56424353-56424372 None:intergenic 50.0%
AGCATTACAGGAAGCCGAAG+AGG + chr1_3:56424644-56424663 Msa0127200:intron 50.0%
TACAGGAAGCCGAAGAGGAA+AGG + chr1_3:56424649-56424668 Msa0127200:intron 50.0%
GCTGAGGAAAGAATTCGTCG+AGG + chr1_3:56424671-56424690 Msa0127200:CDS 50.0%
GAGGAAAGAATTCGTCGAGG+AGG + chr1_3:56424674-56424693 Msa0127200:CDS 50.0%
! GCCGCTTGATCCTTTCAAGT+TGG + chr1_3:56424883-56424902 Msa0127200:intron 50.0%
CAGCTGCAAAATGGCCAGTT+TGG - chr1_3:56425442-56425461 None:intergenic 50.0%
! CCGTCCTCAGCTTTAGTTTC+TGG - chr1_3:56425479-56425498 None:intergenic 50.0%
AAGGAATTCACTGCCATGGG+TGG + chr1_3:56426026-56426045 Msa0127200:CDS 50.0%
CTTCATGAACAGCGGCAGAT+TGG - chr1_3:56426309-56426328 None:intergenic 50.0%
! CGGCTTTCTGCAGCATGTTT+TGG + chr1_3:56426626-56426645 Msa0127200:intron 50.0%
!! GTTTGGTGCATCAAGTCTGG+AGG + chr1_3:56426837-56426856 Msa0127200:CDS 50.0%
ATCCATGACCAAGAGAGGTC+TGG + chr1_3:56427097-56427116 Msa0127200:intron 50.0%
ATTTGAAGAATGGGGCGGCA+AGG - chr1_3:56427131-56427150 None:intergenic 50.0%
CCTTGGAACAAAGGCAGAAG+AGG - chr1_3:56427404-56427423 None:intergenic 50.0%
CCTCTTCTGCCTTTGTTCCA+AGG + chr1_3:56427401-56427420 Msa0127200:intron 50.0%
! ACCTTCTGGAGAGCAACAGT+GGG - chr1_3:56427979-56427998 None:intergenic 50.0%
AGTAGTTGGGCTTGACCTTC+TGG - chr1_3:56427993-56428012 None:intergenic 50.0%
!! TGGAGTTGTTTTACGGAGGG+AGG + chr1_3:56428305-56428324 Msa0127200:intron 50.0%
! GTTTTACGGAGGGAGGTTCT+AGG + chr1_3:56428312-56428331 Msa0127200:intron 50.0%
TGGTTTGAATGGCTCTCCAG+GGG - chr1_3:56428798-56428817 None:intergenic 50.0%
CGACAAGTTATCTCACCAGC+AGG - chr1_3:56429004-56429023 None:intergenic 50.0%
TTTGCGATCTTGTCACCCCT+TGG + chr1_3:56429383-56429402 Msa0127200:intron 50.0%
! GAATCGTAATCTGATGGGCG+CGG + chr1_3:56429424-56429443 Msa0127200:intron 50.0%
CTGCACAGCATGAACAGAAG+CGG - chr1_3:56429499-56429518 None:intergenic 50.0%
! CAGAGTTGTTGTTCACGGGT+CGG + chr1_3:56429516-56429535 Msa0127200:intron 50.0%
TTGACTACCTTGGAAGAGGG+GGG + chr1_3:56430163-56430182 Msa0127200:intron 50.0%
!! CTGGTGGACTGTAGACGAAT+CGG - chr1_3:56430263-56430282 None:intergenic 50.0%
TGTCAGCCGTGCACATGATT+TGG + chr1_3:56430733-56430752 Msa0127200:CDS 50.0%
GGCAATCCATCAATGGGAGA+CGG - chr1_3:56430995-56431014 None:intergenic 50.0%
GGGATGTGTCCATGTCTACA+AGG - chr1_3:56431140-56431159 None:intergenic 50.0%
TGGACACATCCCAAAACCTC+CGG + chr1_3:56431148-56431167 Msa0127200:CDS 50.0%
! CTACACCATCCGGAGGTTTT+GGG - chr1_3:56431160-56431179 None:intergenic 50.0%
! ACTACACCATCCGGAGGTTT+TGG - chr1_3:56431161-56431180 None:intergenic 50.0%
TGATGCCTTCTGTTCCTTCC+TGG + chr1_3:56431340-56431359 Msa0127200:intron 50.0%
CTGATCCAGGAAGGAACAGA+AGG - chr1_3:56431348-56431367 None:intergenic 50.0%
TCATGCCAAAGCACAGGAGA+AGG - chr1_3:56431441-56431460 None:intergenic 50.0%
TTCCAATCAGCTGGACCATC+TGG + chr1_3:56431899-56431918 Msa0127200:CDS 50.0%
ATCCAGATGGTCCAGCTGAT+TGG - chr1_3:56431904-56431923 None:intergenic 50.0%
TCAGCTGGACCATCTGGATA+TGG + chr1_3:56431905-56431924 Msa0127200:CDS 50.0%
TCTGTCTAGTCATTGCGCCA+TGG - chr1_3:56431979-56431998 None:intergenic 50.0%
TGCCCAGCATTAGATGAGAC+TGG - chr1_3:56432007-56432026 None:intergenic 50.0%
AGTCTCATCTAATGCTGGGC+AGG + chr1_3:56432006-56432025 Msa0127200:CDS 50.0%
! ACCCCGATTTGTGCAGAACT+CGG + chr1_3:56432180-56432199 Msa0127200:CDS 50.0%
ACCCGAGTTCTGCACAAATC+GGG - chr1_3:56432185-56432204 None:intergenic 50.0%
GACCCGAGTTCTGCACAAAT+CGG - chr1_3:56432186-56432205 None:intergenic 50.0%
! TTCCACTTTAGGGGACGTAC+TGG - chr1_3:56432211-56432230 None:intergenic 50.0%
CCCCAAGAAACTCCAGATTC+TGG + chr1_3:56432340-56432359 Msa0127200:CDS 50.0%
GAGTGGGCAGATAGAAACCA+AGG - chr1_3:56432408-56432427 None:intergenic 50.0%
ATAGGTCCACTTCGAGGAGT+GGG - chr1_3:56432424-56432443 None:intergenic 50.0%
TACAGGTGGAGAGACAGCAT+AGG - chr1_3:56432442-56432461 None:intergenic 50.0%
TCAACATGCGCCCCTGTTAT+TGG - chr1_3:56432479-56432498 None:intergenic 50.0%
!! GGTGCTGCTCTGATTTGCAT+TGG + chr1_3:56432568-56432587 Msa0127200:three_prime_UTR 50.0%
ATGTAACTGGTGTAAGCCGG+TGG + chr1_3:56432676-56432695 Msa0127200:three_prime_UTR 50.0%
!! TGGTGTTTTGTTCCGTGGCA+TGG + chr1_3:56432736-56432755 Msa0127200:three_prime_UTR 50.0%
TTGTTCCGTGGCATGGAACT+AGG + chr1_3:56432743-56432762 Msa0127200:three_prime_UTR 50.0%
!! ATACAGATGGTGGATGGGCA+TGG - chr1_3:56432909-56432928 None:intergenic 50.0%
CGAGCCAGCGGTAAAAAGCT+GGG - chr1_3:56422831-56422850 None:intergenic 55.0%
CTACGTCGGAGATCGAGAGT+GGG - chr1_3:56422864-56422883 None:intergenic 55.0%
ACTACGTCGGAGATCGAGAG+TGG - chr1_3:56422865-56422884 None:intergenic 55.0%
TCCGACGTAGTCGAAGACGA+CGG + chr1_3:56422874-56422893 Msa0127200:CDS 55.0%
AAACAGGTCAGACCACCGGT+TGG - chr1_3:56423493-56423512 None:intergenic 55.0%
ACCGGTGGTCTGACCTGTTT+CGG + chr1_3:56423493-56423512 Msa0127200:intron 55.0%
GAACCGGTTGAACCCGAAAC+AGG - chr1_3:56423509-56423528 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr1_3:56423699-56423718 Msa0127200:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr1_3:56423700-56423719 Msa0127200:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr1_3:56423701-56423720 Msa0127200:intron 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG - chr1_3:56424038-56424057 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr1_3:56423700-56423719 None:intergenic 55.0%
TCCCCTCCAAACTCCCAAAC+AGG + chr1_3:56424044-56424063 Msa0127200:intron 55.0%
GCCTGTTTGGGAGTTTGGAG+GGG - chr1_3:56424048-56424067 None:intergenic 55.0%
GGCCTGTTTGGGAGTTTGGA+GGG - chr1_3:56424049-56424068 None:intergenic 55.0%
CCAAAGCCTAAGGGCCTGTT+TGG - chr1_3:56424061-56424080 None:intergenic 55.0%
CCAAACAGGCCCTTAGGCTT+TGG + chr1_3:56424058-56424077 Msa0127200:intron 55.0%
! AACAGGCCCTTAGGCTTTGG+AGG + chr1_3:56424061-56424080 Msa0127200:intron 55.0%
!! ACAGGCCCTTAGGCTTTGGA+GGG + chr1_3:56424062-56424081 Msa0127200:intron 55.0%
! TTGGAAGAGGAGGGCTTTGG+GGG + chr1_3:56424124-56424143 Msa0127200:intron 55.0%
! TTTGGAGGCGAGGGCTTTGA+GGG - chr1_3:56424338-56424357 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGCGA+GGG - chr1_3:56424347-56424366 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGCG+AGG - chr1_3:56424348-56424367 None:intergenic 55.0%
TGAATCAGCAACGTTCCCGG+CGG + chr1_3:56424516-56424535 Msa0127200:CDS 55.0%
! CAGCTGCATCTTTTGCAGCC+CGG - chr1_3:56424544-56424563 None:intergenic 55.0%
GGCTGCAAAAGATGCAGCTG+AGG + chr1_3:56424544-56424563 Msa0127200:CDS 55.0%
AAGCCGAAGAGGAAAGGCTG+AGG + chr1_3:56424655-56424674 Msa0127200:CDS 55.0%
GATTGAACCACAACCCTGCC+TGG + chr1_3:56424811-56424830 Msa0127200:CDS 55.0%
GCTCTCTTTAGCTACCCACG+AGG + chr1_3:56425261-56425280 Msa0127200:CDS 55.0%
GAGATGAGAGCTAGGGCAAG+AGG + chr1_3:56426493-56426512 Msa0127200:CDS 55.0%
GTTAGGGGAGCCTGGATACA+AGG + chr1_3:56426795-56426814 Msa0127200:CDS 55.0%
GGGAGCCTGGATACAAGGAA+AGG + chr1_3:56426800-56426819 Msa0127200:CDS 55.0%
CTCCAGACCTCTCTTGGTCA+TGG - chr1_3:56427102-56427121 None:intergenic 55.0%
TCCCACTGTTGCTCTCCAGA+AGG + chr1_3:56427975-56427994 Msa0127200:intron 55.0%
! GACCTTCTGGAGAGCAACAG+TGG - chr1_3:56427980-56427999 None:intergenic 55.0%
!! AATGGCTTGCTGCGCATTCC+TGG + chr1_3:56428482-56428501 Msa0127200:intron 55.0%
GGAAGAACCTTGAAGCAGGC+AGG - chr1_3:56428841-56428860 None:intergenic 55.0%
TGTGTGGAAGGGAGGGAAGA+GGG + chr1_3:56429317-56429336 Msa0127200:intron 55.0%
! GTAATCTGATGGGCGCGGTA+AGG + chr1_3:56429429-56429448 Msa0127200:intron 55.0%
ACCTCTCTCCGATCTTGCCT+AGG + chr1_3:56430131-56430150 Msa0127200:intron 55.0%
TCCTAGGCAAGATCGGAGAG+AGG - chr1_3:56430135-56430154 None:intergenic 55.0%
GTAACAACCCCCCTCTTCCA+AGG - chr1_3:56430173-56430192 None:intergenic 55.0%
TGGACTGTAGACGAATCGGC+AGG - chr1_3:56430259-56430278 None:intergenic 55.0%
CGATTCGTCTACAGTCCACC+AGG + chr1_3:56430261-56430280 Msa0127200:intron 55.0%
!!! CAGGTTTTGGGCACACCTTC+AGG - chr1_3:56430390-56430409 None:intergenic 55.0%
! CTGAAGGTGTGCCCAAAACC+TGG + chr1_3:56430388-56430407 Msa0127200:intron 55.0%
! CATCCCTCCTGCCAGGTTTT+GGG - chr1_3:56430402-56430421 None:intergenic 55.0%
TGCAGGACGAAGAACAGCGT+CGG + chr1_3:56430684-56430703 Msa0127200:intron 55.0%
CACATCCCAAAACCTCCGGA+TGG + chr1_3:56431152-56431171 Msa0127200:CDS 55.0%
GGTATCACTACACCATCCGG+AGG - chr1_3:56431167-56431186 None:intergenic 55.0%
AATGTTGGTCGGGGACAGCA+AGG + chr1_3:56431465-56431484 Msa0127200:CDS 55.0%
AGGTTGCTCCAACACTCCGT+GGG - chr1_3:56431855-56431874 None:intergenic 55.0%
CTCATCTAATGCTGGGCAGG+TGG + chr1_3:56432009-56432028 Msa0127200:CDS 55.0%
GATTGAGACCTGCACCATCG+AGG + chr1_3:56432125-56432144 Msa0127200:CDS 55.0%
CCCGAGTTCTGCACAAATCG+GGG - chr1_3:56432184-56432203 None:intergenic 55.0%
! CCCCGATTTGTGCAGAACTC+GGG + chr1_3:56432181-56432200 Msa0127200:CDS 55.0%
! CACTTTAGGGGACGTACTGG+AGG - chr1_3:56432208-56432227 None:intergenic 55.0%
CTCCAGTACGTCCCCTAAAG+TGG + chr1_3:56432206-56432225 Msa0127200:CDS 55.0%
GATGCAGCTTCTTGACGCCT+AGG - chr1_3:56432262-56432281 None:intergenic 55.0%
AGGCGTCAAGAAGCTGCATC+TGG + chr1_3:56432262-56432281 Msa0127200:CDS 55.0%
GGCGTCAAGAAGCTGCATCT+GGG + chr1_3:56432263-56432282 Msa0127200:CDS 55.0%
GCGTCAAGAAGCTGCATCTG+GGG + chr1_3:56432264-56432283 Msa0127200:CDS 55.0%
TATCTGCCCACTCCTCGAAG+TGG + chr1_3:56432415-56432434 Msa0127200:three_prime_UTR 55.0%
CATAGGTCCACTTCGAGGAG+TGG - chr1_3:56432425-56432444 None:intergenic 55.0%
GACAGCATAGGTCCACTTCG+AGG - chr1_3:56432430-56432449 None:intergenic 55.0%
AGCTGGGACCCCCATAGTGT+TGG - chr1_3:56422815-56422834 None:intergenic 60.0%
! GGGTCCCAGCTTTTTACCGC+TGG + chr1_3:56422824-56422843 Msa0127200:CDS 60.0%
GCGAGCCAGCGGTAAAAAGC+TGG - chr1_3:56422832-56422851 None:intergenic 60.0%
GCCGTCGTCTTCGACTACGT+CGG - chr1_3:56422878-56422897 None:intergenic 60.0%
CATGACCCAAAGGTCCGGTC+TGG - chr1_3:56423364-56423383 None:intergenic 60.0%
CAGACCGGACCTTTGGGTCA+TGG + chr1_3:56423362-56423381 Msa0127200:intron 60.0%
CCCGAAACAGGTCAGACCAC+CGG - chr1_3:56423497-56423516 None:intergenic 60.0%
CCGGTGGTCTGACCTGTTTC+GGG + chr1_3:56423494-56423513 Msa0127200:intron 60.0%
TGGAGGGGAGGGGATGACTT+TGG + chr1_3:56423711-56423730 Msa0127200:intron 60.0%
GGAGGGGAGGGGATGACTTT+GGG + chr1_3:56423712-56423731 Msa0127200:intron 60.0%
GAGGGGAGGGGATGACTTTG+GGG + chr1_3:56423713-56423732 Msa0127200:intron 60.0%
AGGGGAGGGGATGACTTTGG+GGG + chr1_3:56423714-56423733 Msa0127200:intron 60.0%
GGGAAGGGAAGGGAAGGGTT+TGG - chr1_3:56424028-56424047 None:intergenic 60.0%
TGGAGGGGAAGGGAAGGGAA+GGG - chr1_3:56424033-56424052 None:intergenic 60.0%
TTGGAGGGGAAGGGAAGGGA+AGG - chr1_3:56424034-56424053 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG - chr1_3:56424039-56424058 None:intergenic 60.0%
GGGCCTGTTTGGGAGTTTGG+AGG - chr1_3:56424050-56424069 None:intergenic 60.0%
!! CAGGCCCTTAGGCTTTGGAG+GGG + chr1_3:56424063-56424082 Msa0127200:intron 60.0%
CCCTCCCCTCCAAAGCCTAA+GGG - chr1_3:56424070-56424089 None:intergenic 60.0%
!! CCCTTAGGCTTTGGAGGGGA+GGG + chr1_3:56424067-56424086 Msa0127200:intron 60.0%
!! TGGAAGAGGAGGGCTTTGGG+GGG + chr1_3:56424125-56424144 Msa0127200:intron 60.0%
!! GCTTTGAGGGACGGAAGTGG+AGG - chr1_3:56424325-56424344 None:intergenic 60.0%
!! AGGGCTTTGAGGGACGGAAG+TGG - chr1_3:56424328-56424347 None:intergenic 60.0%
GTTTGGAGGCGAGGGCTTTG+AGG - chr1_3:56424339-56424358 None:intergenic 60.0%
CAGGTCAAGTTAGGGGAGCC+TGG + chr1_3:56426787-56426806 Msa0127200:intron 60.0%
GTGTGTGGAAGGGAGGGAAG+AGG + chr1_3:56429316-56429335 Msa0127200:intron 60.0%
TTGTCACCCCTTGGCGTGCT+GGG + chr1_3:56429392-56429411 Msa0127200:intron 60.0%
ACCATACCCCAGCACGCCAA+GGG - chr1_3:56429402-56429421 None:intergenic 60.0%
TTGGCGTGCTGGGGTATGGT+CGG + chr1_3:56429402-56429421 Msa0127200:intron 60.0%
AGGTGTGCCCAAAACCTGGC+AGG + chr1_3:56430392-56430411 Msa0127200:intron 60.0%
TGTGCCCAAAACCTGGCAGG+AGG + chr1_3:56430395-56430414 Msa0127200:intron 60.0%
GTGCCCAAAACCTGGCAGGA+GGG + chr1_3:56430396-56430415 Msa0127200:intron 60.0%
! GCATCCCTCCTGCCAGGTTT+TGG - chr1_3:56430403-56430422 None:intergenic 60.0%
TTGGTCGGGGACAGCAAGGA+AGG + chr1_3:56431469-56431488 Msa0127200:CDS 60.0%
TGGTCGGGGACAGCAAGGAA+GGG + chr1_3:56431470-56431489 Msa0127200:CDS 60.0%
GGGGACAGCAAGGAAGGGAA+AGG + chr1_3:56431475-56431494 Msa0127200:CDS 60.0%
GAGGTTGCTCCAACACTCCG+TGG - chr1_3:56431856-56431875 None:intergenic 60.0%
CCAGAAATTGGCGGCCTCGA+TGG - chr1_3:56432142-56432161 None:intergenic 60.0%
CCATCGAGGCCGCCAATTTC+TGG + chr1_3:56432139-56432158 Msa0127200:CDS 60.0%
GGTAACGATCGGCGAGCCAG+CGG - chr1_3:56422843-56422862 None:intergenic 65.0%
! CGGGTTCAACCGGTTCCGTC+TGG + chr1_3:56423513-56423532 Msa0127200:intron 65.0%
! GGAGGGGATGACTTTGGGGG+TGG + chr1_3:56423717-56423736 Msa0127200:intron 65.0%
!! GCCCTTAGGCTTTGGAGGGG+AGG + chr1_3:56424066-56424085 Msa0127200:intron 65.0%
GCCCTCCCCTCCAAAGCCTA+AGG - chr1_3:56424071-56424090 None:intergenic 65.0%
!! GAGGCGAGGGCTTTGAGGGA+CGG - chr1_3:56424334-56424353 None:intergenic 65.0%
AGCAACGTTCCCGGCGGTTC+CGG + chr1_3:56424522-56424541 Msa0127200:CDS 65.0%
! TTTTGCAGCCCGGAACCGCC+GGG - chr1_3:56424534-56424553 None:intergenic 65.0%
! CTTTTGCAGCCCGGAACCGC+CGG - chr1_3:56424535-56424554 None:intergenic 65.0%
TGGGGGTCCTGCCTGCTTCA+AGG + chr1_3:56428831-56428850 Msa0127200:CDS 65.0%
GGAAGGGAGGGAAGAGGGCA+TGG + chr1_3:56429322-56429341 Msa0127200:intron 65.0%
CTTGTCACCCCTTGGCGTGC+TGG + chr1_3:56429391-56429410 Msa0127200:intron 65.0%
TGTCACCCCTTGGCGTGCTG+GGG + chr1_3:56429393-56429412 Msa0127200:intron 65.0%
CCATACCCCAGCACGCCAAG+GGG - chr1_3:56429401-56429420 None:intergenic 65.0%
GACCATACCCCAGCACGCCA+AGG - chr1_3:56429403-56429422 None:intergenic 65.0%
ATTGGCGGCCTCGATGGTGC+AGG - chr1_3:56432136-56432155 None:intergenic 65.0%
GCAACGTTCCCGGCGGTTCC+GGG + chr1_3:56424523-56424542 Msa0127200:CDS 70.0%
CCCCTTGGCGTGCTGGGGTA+TGG + chr1_3:56429398-56429417 Msa0127200:intron 70.0%
GCAGCTGCATCCCTCCTGCC+AGG - chr1_3:56430409-56430428 None:intergenic 70.0%
GGGCGCGGTAAGGATCGCCG+CGG + chr1_3:56429439-56429458 Msa0127200:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 56422660 56432982 56422660 ID=Msa0127200;Name=Msa0127200
chr1_3 mRNA 56422660 56432982 56422660 ID=Msa0127200-mRNA-1;Parent=Msa0127200;Name=Msa0127200-mRNA-1;_AED=0.18;_eAED=0.18;_QI=160|0.9|0.85|1|1|1|21|610|971
chr1_3 exon 56422660 56423008 56422660 ID=Msa0127200-mRNA-1:exon:17789;Parent=Msa0127200-mRNA-1
chr1_3 exon 56423098 56423200 56423098 ID=Msa0127200-mRNA-1:exon:17790;Parent=Msa0127200-mRNA-1
chr1_3 exon 56424492 56424568 56424492 ID=Msa0127200-mRNA-1:exon:17791;Parent=Msa0127200-mRNA-1
chr1_3 exon 56424654 56424845 56424654 ID=Msa0127200-mRNA-1:exon:17792;Parent=Msa0127200-mRNA-1
chr1_3 exon 56425028 56425147 56425028 ID=Msa0127200-mRNA-1:exon:17793;Parent=Msa0127200-mRNA-1
chr1_3 exon 56425244 56425306 56425244 ID=Msa0127200-mRNA-1:exon:17794;Parent=Msa0127200-mRNA-1
chr1_3 exon 56425398 56425541 56425398 ID=Msa0127200-mRNA-1:exon:17795;Parent=Msa0127200-mRNA-1
chr1_3 exon 56425621 56425794 56425621 ID=Msa0127200-mRNA-1:exon:17796;Parent=Msa0127200-mRNA-1
chr1_3 exon 56425993 56426070 56425993 ID=Msa0127200-mRNA-1:exon:17797;Parent=Msa0127200-mRNA-1
chr1_3 exon 56426277 56426363 56426277 ID=Msa0127200-mRNA-1:exon:17798;Parent=Msa0127200-mRNA-1
chr1_3 exon 56426475 56426555 56426475 ID=Msa0127200-mRNA-1:exon:17799;Parent=Msa0127200-mRNA-1
chr1_3 exon 56426790 56426885 56426790 ID=Msa0127200-mRNA-1:exon:17800;Parent=Msa0127200-mRNA-1
chr1_3 exon 56427713 56427783 56427713 ID=Msa0127200-mRNA-1:exon:17801;Parent=Msa0127200-mRNA-1
chr1_3 exon 56428724 56428852 56428724 ID=Msa0127200-mRNA-1:exon:17802;Parent=Msa0127200-mRNA-1
chr1_3 exon 56428931 56429135 56428931 ID=Msa0127200-mRNA-1:exon:17803;Parent=Msa0127200-mRNA-1
chr1_3 exon 56429228 56429302 56429228 ID=Msa0127200-mRNA-1:exon:17804;Parent=Msa0127200-mRNA-1
chr1_3 exon 56430689 56430840 56430689 ID=Msa0127200-mRNA-1:exon:17805;Parent=Msa0127200-mRNA-1
chr1_3 exon 56430934 56431038 56430934 ID=Msa0127200-mRNA-1:exon:17806;Parent=Msa0127200-mRNA-1
chr1_3 exon 56431118 56431193 56431118 ID=Msa0127200-mRNA-1:exon:17807;Parent=Msa0127200-mRNA-1
chr1_3 exon 56431414 56431496 56431414 ID=Msa0127200-mRNA-1:exon:17808;Parent=Msa0127200-mRNA-1
chr1_3 exon 56431757 56432982 56431757 ID=Msa0127200-mRNA-1:exon:17809;Parent=Msa0127200-mRNA-1
chr1_3 five_prime_UTR 56422660 56422819 56422660 ID=Msa0127200-mRNA-1:five_prime_utr;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56422820 56423008 56422820 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56423098 56423200 56423098 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56424492 56424568 56424492 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56424654 56424845 56424654 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56425028 56425147 56425028 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56425244 56425306 56425244 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56425398 56425541 56425398 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56425621 56425794 56425621 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56425993 56426070 56425993 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56426277 56426363 56426277 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56426475 56426555 56426475 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56426790 56426885 56426790 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56427713 56427783 56427713 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56428724 56428852 56428724 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56428931 56429135 56428931 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56429228 56429302 56429228 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56430689 56430840 56430689 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56430934 56431038 56430934 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56431118 56431193 56431118 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56431414 56431496 56431414 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 CDS 56431757 56432372 56431757 ID=Msa0127200-mRNA-1:cds;Parent=Msa0127200-mRNA-1
chr1_3 three_prime_UTR 56432373 56432982 56432373 ID=Msa0127200-mRNA-1:three_prime_utr;Parent=Msa0127200-mRNA-1
Gene Sequence

>Msa0127200

ATGGGGGTCCCAGCTTTTTACCGCTGGCTCGCCGATCGTTACCCACTCTCGATCTCCGACGTAGTCGAAGACGACGGCGTTTCGTCCCCTATCGACGCTTCTAAACCCAATCCCAACGGAATTGAGTTCGATAACTTGTACTTGGATATGAACGGTATCATTCACCCTTGTTTTCACCCTGATGGCAAGGCAGCACCAGCTACTTATGATGAAGTTTTTAAATTGGTATTTGATTATGTTGATCATCTCTTTTCCTTGGTTCGTCCAAGGAAGCTTCTTTACCTTGCAACTGATGGTGTTGCACCAAGAGCCAAAATGAATCAGCAACGTTCCCGGCGGTTCCGGGCTGCAAAAGATGCAGCTGAGGCTGAAGCCGAAGAGGAAAGGCTGAGGAAAGAATTCGTCGAGGAGGGAGCACTTTTGTCTTCTAAGGACAAGCCTGAGACTTCAGACTCAAATGTCATTACCCCTGGTACTAAATTTATGGCATCTCTGTCAGTGGCTCTTCAGTATTATGTACAGACTAGATTGAACCACAACCCTGCCTGGAAAAATATAAAGGTTATACTTTCTGATTCGAATGTTCCTGGTGAGGGAGAACATAAAATAATGGAATACATCCGGTTACAACGTAACATTCCTGGTTTCAATCCGAATACTCAACATTGTTTGTATGGATTGGATGCTGATTTGATTATGCTCTCTTTAGCTACCCACGAGGTTCACTTCTCAATATTGAGGGAGGTAATTACTTTACCTGGACAAGATAAGTGTTTTGTGTGTGGCCAAACTGGCCATTTTGCAGCTGATTGTCATGGTAAGCCAGAAACTAAAGCTGAGGACGGGAATCCTGCTGATGAAATCCCTATTCGCAAGAAGAAATATCAGTATTCACAGTTTCTTAACATCTGGGTGCTTCGTGAATATTTGCAATATGAATTGGAGATTCCCAACCCTCCTTTTGAGATTGACTTTGAACGAGTAGTGGATGATTTTGTATTTCTGTGCTTCTTTGTCGGCAATGACTTTCTTCCTCATATGCCAACATTAGAGATCAGAGAGGGAGCTATAAATTTACTGATGCATATATATAGAAAGGAATTCACTGCCATGGGTGGTTATCTTACTTATGCGGGTGAGGTTTTCTTAGATAGAGTAGAATATTTTATCCAATCTGCCGCTGTTCATGAAGATCAAATCTTTCAGAAACGAGTTCGAGTTCAACAGGTGGCAGAAAATAATGAAGAGATGAGAGCTAGGGCAAGAGGAGTAATACTTCAAGAGCCACGGGCCTCATTTTCTGATAAGGTCAAGTTAGGGGAGCCTGGATACAAGGAAAGGTATTATGTTGAAAAGTTTGGTGCATCAAGTCTGGAGGAGATTGATAAAATTAAGAAAGATATAGTTTTGAAATATGTGGAAGGCCTTTGTTGGATTTGCCAGTATTATTATAACGGTGTATGCTCATGGAAATGGTACTACCCGTATCATTATGCTCCTTTTGCTTCTGATCTTAAAGATCTACCTAATCTAGAAATAATTTTTTCCCCTGGAGAGCCATTCAAACCATTTGATCAGCTTATGGGGGTCCTGCCTGCTTCAAGTTCAAATGCACTGCCTGACAAATATAGGGATTTGATGACCGATCCTTCATCACCTATTTTTCACTTCTACCCTGCTGGTGAGATAACTTGTCGATTAAATTTGTATTCTGCTATATGTAACATATTTTCTTATTCTGATATTTACATGGATACCTTTTTGACAGATTTTGAGATTGATATGAATGGAAAACGATTTGCATGGCAGGGTGTTGCCAAATTGCCATTTATTGATGAGAAGAAATTGCTTGCTTCCACAAGGAAGCTTGAAGACACATTAACGGACGAAGAACAGCGTCGGAATAGTGTGATGCTTGATTTGCTTTATGTCAGCCGTGCACATGATTTGGCTTCACATATTTTACTGTATTACCAAGTTTTTGGTCGATTAGCCACTCATGAAAGATGTGTTTCACCAATTAACGCAAATGCTAGTGGTGGGATGAATGGATATCTTTGGGCATGTGAGAGAAATGTTTTGAGCTCTATTGTACCGTCTCCCATTGATGGATTGCCAGATATCGAGAGTAATCAAGTCTTAAATATTACATATCTCAATCCTTGTAGACATGGACACATCCCAAAACCTCCGGATGGTGTAGTGATACCCAAAAAGATAATAAAAGACATTGATATCAAACCTTCTCCTGTGCTTTGGCATGAAGACAATGTTGGTCGGGGACAGCAAGGAAGGGAAAGGTCACAAGTATCTGGAGCAATAACTGGATCTCAATTAGGAGAAGCAGCTCATCGTCTCGTCAAGAACACCCTTAACATTAAATGGAATAATACATCCCACGGAGTGTTGGAGCAACCTCCAGTTCGCCATACAACAAACAGGTTCCAATCAGCTGGACCATCTGGATATGGAAAATATTCTGGCGAGAACACTAACAGTTATTATGGAGAACATAATCACCATGGCGCAATGACTAGACAGAGATATCCAGTCTCATCTAATGCTGGGCAGGTGGACAGACAAAATTTTAGAACACAAGATAGGCCAAGGCATCAAGAACAGTTCCAAAATGTGAAGACTGGGTTTTCTGCTTTAACAATGGAGGAAGGATTGAGACCTGCACCATCGAGGCCGCCAATTTCTGGACCAACAACCAATTTAGAACCCCGATTTGTGCAGAACTCGGGTCCTCCAGTACGTCCCCTAAAGTGGAATACTAAAGCACCTGTAAATGGAATGTATCCTAGGCGTCAAGAAGCTGCATCTGGGGCAGTGCCTCATCATAAGCAGATAAAGAAGGTTTACCAAGTTAAAACACGTTTGCCCCAAGAAACTCCAGATTCTGGTAATCAATAG
Protein sequence

>Msa0127200

MGVPAFYRWLADRYPLSISDVVEDDGVSSPIDASKPNPNGIEFDNLYLDMNGIIHPCFHPDGKAAPATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEERLRKEFVEEGALLSSKDKPETSDSNVITPGTKFMASLSVALQYYVQTRLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTQHCLYGLDADLIMLSLATHEVHFSILREVITLPGQDKCFVCGQTGHFAADCHGKPETKAEDGNPADEIPIRKKKYQYSQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSAAVHEDQIFQKRVRVQQVAENNEEMRARARGVILQEPRASFSDKVKLGEPGYKERYYVEKFGASSLEEIDKIKKDIVLKYVEGLCWICQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLMGVLPASSSNALPDKYRDLMTDPSSPIFHFYPAGEITCRLNLYSAICNIFSYSDIYMDTFLTDFEIDMNGKRFAWQGVAKLPFIDEKKLLASTRKLEDTLTDEEQRRNSVMLDLLYVSRAHDLASHILLYYQVFGRLATHERCVSPINANASGGMNGYLWACERNVLSSIVPSPIDGLPDIESNQVLNITYLNPCRHGHIPKPPDGVVIPKKIIKDIDIKPSPVLWHEDNVGRGQQGRERSQVSGAITGSQLGEAAHRLVKNTLNIKWNNTSHGVLEQPPVRHTTNRFQSAGPSGYGKYSGENTNSYYGEHNHHGAMTRQRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGFSALTMEEGLRPAPSRPPISGPTTNLEPRFVQNSGPPVRPLKWNTKAPVNGMYPRRQEAASGAVPHHKQIKKVYQVKTRLPQETPDSGNQ*