AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177120 MtrunA17_Chr1g0199851 96.667 660 20 1 213 872 20 677 0.0 1324
Msa0177120 MtrunA17_Chr1g0199841 86.592 179 21 1 1 176 1 179 6.22e-110 335
Msa0177120 MtrunA17_Chr3g0113261 30.266 413 214 11 494 856 192 580 1.11e-43 167
Msa0177120 MtrunA17_Chr3g0107391 30.266 413 214 12 494 856 191 579 2.29e-43 167
Msa0177120 MtrunA17_Chr3g0116881 30.966 352 205 8 534 856 214 556 3.22e-41 160
Msa0177120 MtrunA17_Chr1g0211991 30.733 423 227 11 492 868 156 558 2.62e-40 157
Msa0177120 MtrunA17_Chr1g0162011 31.250 256 106 10 80 328 71 263 2.15e-22 98.2
Msa0177120 MtrunA17_Chr4g0039031 27.083 192 135 5 671 861 360 547 5.89e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177120 AT2G28880.1 60.390 871 306 6 38 871 44 912 0.0 1045
Msa0177120 AT2G29690.1 30.976 410 239 10 494 868 198 598 2.54e-45 173
Msa0177120 AT3G55870.1 30.446 404 230 11 492 856 74 465 1.14e-40 157
Msa0177120 AT3G55870.3 30.446 404 230 11 492 856 173 564 4.09e-40 157
Msa0177120 AT5G05730.1 29.833 419 232 12 482 856 173 573 4.70e-40 157
Msa0177120 AT5G05730.2 29.148 446 229 14 482 856 173 602 9.43e-39 154
Msa0177120 AT2G29690.2 29.747 316 196 10 494 792 198 504 3.09e-29 123
Msa0177120 AT3G55870.2 29.245 318 193 10 492 789 173 478 1.72e-25 111
Msa0177120 AT5G57890.1 31.225 253 110 9 80 328 73 265 1.15e-22 99.4
Msa0177120 AT1G25220.1 31.225 253 110 9 80 328 76 268 1.32e-22 99.4
Msa0177120 AT1G24909.1 30.830 253 111 9 80 328 22 214 6.93e-22 95.5
Msa0177120 AT1G25083.1 30.830 253 111 9 80 328 22 214 6.93e-22 95.5
Msa0177120 AT1G25155.1 30.830 253 111 9 80 328 22 214 6.93e-22 95.5
Msa0177120 AT1G25220.2 30.189 265 110 10 80 328 76 281 2.00e-20 93.2
Msa0177120 AT1G24807.1 29.811 265 111 10 80 328 22 227 8.44e-20 90.1
Msa0177120 AT1G74710.2 28.796 191 131 4 671 860 363 549 3.09e-13 73.9
Msa0177120 AT1G74710.1 28.922 204 137 6 671 872 363 560 3.98e-13 73.6
Msa0177120 AT1G18870.1 28.272 191 132 5 671 860 358 544 4.95e-13 73.2
Msa0177120 AT1G18870.2 28.272 191 132 5 671 860 308 494 6.63e-13 72.8

Find 276 sgRNAs with CRISPR-Local

Find 722 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATCGGTTTCCTTATC+TGG 0.083920 1_4:-63971586 None:intergenic
TATTCAATTCCTTGTGAAAT+TGG 0.124478 1_4:+63972994 Msa0177120:three_prime_UTR
AAATGATGATGTTTATTTAT+TGG 0.138927 1_4:+63971325 Msa0177120:CDS
AATAGGACACTTCCATTTAT+TGG 0.140688 1_4:+63967759 Msa0177120:CDS
ATCTCTTCGTATTCGTCTTC+TGG 0.192553 1_4:-63972486 None:intergenic
TGGCCATCTCACTTATTTCT+TGG 0.212055 1_4:+63973124 Msa0177120:three_prime_UTR
GAGAGATTACAGATGATTAT+TGG 0.221662 1_4:+63968116 Msa0177120:CDS
TCATCTCTTCTATATTTAAC+AGG 0.250399 1_4:-63973242 None:intergenic
TTCTGTCAAAACAATATTCT+TGG 0.251281 1_4:+63969471 Msa0177120:CDS
CACTTATTTCTTGGGTTTAG+AGG 0.255140 1_4:+63973133 Msa0177120:three_prime_UTR
TTGCTATACCACCATTCTTT+TGG 0.255917 1_4:-63972750 None:intergenic
TGTACAACAAAAGAAATATC+TGG 0.260679 1_4:-63973338 None:intergenic
ATGCAGGGATATTCCTATTC+TGG 0.268177 1_4:+63965233 Msa0177120:CDS
GCTAGAAGCTAAGCCCATTA+AGG 0.273961 1_4:+63971751 Msa0177120:CDS
TAGAAATGCAGGGGTTCTTA+TGG 0.283438 1_4:+63967902 Msa0177120:CDS
ACGAGCTATAGTACCCTTAA+TGG 0.290221 1_4:-63971765 None:intergenic
CATGTGCTTGGCAGTAATTT+TGG 0.296569 1_4:+63972891 Msa0177120:three_prime_UTR
ATTTATTGGATCCGAGGTTT+TGG 0.298084 1_4:+63967773 Msa0177120:CDS
CTATTTGAAGTCCATGCTAT+TGG 0.298195 1_4:-63967741 None:intergenic
GGCCATCTCACTTATTTCTT+GGG 0.306339 1_4:+63973125 Msa0177120:three_prime_UTR
ATTCAATTCCTTGTGAAATT+GGG 0.309485 1_4:+63972995 Msa0177120:three_prime_UTR
AAAGAAGTTAACGAGAGATT+TGG 0.311002 1_4:-63963034 None:intergenic
GACACTTCTTAACATCTCTA+AGG 0.313097 1_4:-63971517 None:intergenic
GAACTTCCGTTTCCTGCTTC+AGG 0.314406 1_4:-63967855 None:intergenic
TAGGAAATGCTCATATTTCA+TGG 0.316278 1_4:+63973563 Msa0177120:three_prime_UTR
ATACCTTCTGGTAGAAATTC+TGG 0.316634 1_4:+63966441 Msa0177120:CDS
TGATTCTCACCTATATCTTC+TGG 0.321594 1_4:-63964155 None:intergenic
AAAACCTCGGATCCAATAAA+TGG 0.325149 1_4:-63967771 None:intergenic
ATAGCAAAGATAAATTGTTT+TGG 0.326109 1_4:+63972766 Msa0177120:three_prime_UTR
CAGAATCTTCCAGTGATAAA+TGG 0.331158 1_4:-63969444 None:intergenic
TGCACGATATTCTGCTTTAG+TGG 0.331296 1_4:-63973620 None:intergenic
AGTATATTCTGTCAGTTGTT+TGG 0.333061 1_4:+63968842 Msa0177120:CDS
CTTTGCATTCCTTCTGTAAA+GGG 0.338991 1_4:-63972724 None:intergenic
TCTCTTCGTATTCGTCTTCT+GGG 0.362497 1_4:-63972485 None:intergenic
GAGAAGCTTCTGAGCTTAAC+TGG 0.362909 1_4:+63971398 Msa0177120:CDS
CAATAGCATGGACTTCAAAT+AGG 0.365417 1_4:+63967742 Msa0177120:CDS
AGTTCAAGCCTTGTTGACTA+TGG 0.367257 1_4:+63967873 Msa0177120:CDS
ACAACGGGTTCTCATCTTCC+TGG 0.367270 1_4:+63972667 Msa0177120:three_prime_UTR
ACAAAACTTTGAAGTTGAAA+TGG 0.368700 1_4:+63968777 Msa0177120:CDS
ACAAATTACAATGAAATTGT+TGG 0.377422 1_4:-63972968 None:intergenic
TGTCTGACCATGGGCCAAAA+AGG 0.384744 1_4:-63972587 None:intergenic
TGGTAGAAATTCTGGTTTCA+AGG 0.385639 1_4:+63966449 Msa0177120:CDS
AGGAAGCTGAAAACACCTTT+TGG 0.386030 1_4:+63968867 Msa0177120:CDS
ATTGAGGTATTAAATTCTCT+TGG 0.386994 1_4:+63971602 Msa0177120:CDS
CTCAATCGGTTTCCTTATCT+GGG 0.387674 1_4:-63971585 None:intergenic
GCTATTGGAATGAGCACTTC+AGG 0.390822 1_4:-63967726 None:intergenic
TTCAAGTATTTCACAATGGT+TGG 0.390964 1_4:+63971364 Msa0177120:CDS
CCCTGAGAGGTTCCTGCAGT+TGG 0.400432 1_4:+63971715 Msa0177120:CDS
TAATCTATCACAGTGTTTGC+TGG 0.401931 1_4:-63972528 None:intergenic
TGTGTCAAAGCTGCATTTCC+TGG 0.402597 1_4:+63972258 Msa0177120:CDS
AGAGAATTTAATACCTCAAT+CGG 0.403042 1_4:-63971599 None:intergenic
TGGCAGGTTGCAACACTCTC+TGG 0.403170 1_4:-63968067 None:intergenic
ATGATTATTGGCTGAGATGT+AGG 0.404436 1_4:+63968128 Msa0177120:CDS
TTTGGAAGCAGTTAACGTTC+AGG 0.409857 1_4:+63969200 Msa0177120:CDS
CATTTGTGAGTCCAACAAAC+TGG 0.411698 1_4:-63973214 None:intergenic
AACCCTTGCGAAGGAGGGTC+TGG 0.411882 1_4:-63963421 None:intergenic
TTCAAATATTGCGTGAATGC+AGG 0.416800 1_4:+63965217 Msa0177120:CDS
AGGAAATTTGATCACTTGGC+TGG 0.419221 1_4:+63968800 Msa0177120:CDS
TTTACCTACATTTAAGAGAA+AGG 0.420459 1_4:+63971627 Msa0177120:CDS
CAAGACTTGGTCCAGTTTGT+TGG 0.421904 1_4:+63973203 Msa0177120:three_prime_UTR
CCCGTGGTTTGATAGGCATT+GGG 0.423040 1_4:+63966180 Msa0177120:intron
CTAGAAGCTAAGCCCATTAA+GGG 0.423824 1_4:+63971752 Msa0177120:CDS
CTAAATGGTCATGCGTCAAT+TGG 0.424836 1_4:-63963506 None:intergenic
AATTGCCCCTCCAGCTCCTA+TGG 0.425604 1_4:-63972448 None:intergenic
TTTCCTGGTGGTTCGATGAC+AGG 0.425849 1_4:+63972273 Msa0177120:CDS
AGTTCCATTGATCTCAACTT+TGG 0.425932 1_4:-63972300 None:intergenic
TCCAACTGCAGGAACCTCTC+AGG 0.428773 1_4:-63971716 None:intergenic
TGGTTCTGTGAGGATGGATT+TGG 0.430243 1_4:+63971418 Msa0177120:CDS
ATGAAATATGAGCATTTCCT+AGG 0.433695 1_4:-63973561 None:intergenic
TTCACATACAAAATTACAAC+GGG 0.438545 1_4:+63972652 Msa0177120:three_prime_UTR
GAAAATATAAAATGATTAGT+AGG 0.439931 1_4:-63972632 None:intergenic
CCTTTGCATTCCTTCTGTAA+AGG 0.440381 1_4:-63972725 None:intergenic
GACCAAGGTCATTTCTTAGA+AGG 0.440815 1_4:-63972113 None:intergenic
CCTATTCTGGGTGTTTGCCT+CGG 0.440882 1_4:+63965246 Msa0177120:CDS
CCGGCATGCCCAGAAGATAT+AGG 0.443381 1_4:+63964146 Msa0177120:CDS
TGCAGGGATATTCCTATTCT+GGG 0.444432 1_4:+63965234 Msa0177120:CDS
TACCTCAGACGCCCGTGAAC+TGG 0.444477 1_4:-63966240 None:intergenic
CACAAATAGATACGTTAATA+CGG 0.445771 1_4:-63973072 None:intergenic
TTAGAAGGTCAACAATCATC+AGG 0.447823 1_4:-63972098 None:intergenic
GATTCCTTTCTCTTAAATGT+AGG 0.447911 1_4:-63971631 None:intergenic
AGTATATAGCGATGCCGATT+GGG 0.448301 1_4:+63973490 Msa0177120:three_prime_UTR
CTTGGTCGTGTATGTGATCC+TGG 0.449044 1_4:+63972129 Msa0177120:CDS
GACACAAGAAAATCTACTAC+TGG 0.449695 1_4:+63973526 Msa0177120:three_prime_UTR
TATAGTGATGGGAGTTCAAA+AGG 0.451018 1_4:+63969415 Msa0177120:intron
AGAATTGCCTCTACAGAAGC+AGG 0.451458 1_4:+63963557 Msa0177120:CDS
CGAGCTATAGTACCCTTAAT+GGG 0.451531 1_4:-63971764 None:intergenic
GATTCTCACCTATATCTTCT+GGG 0.451656 1_4:-63964154 None:intergenic
CAAATACACAGATCTTCCTT+TGG 0.452881 1_4:-63971683 None:intergenic
AAAATGATTAGTAGGACAAA+AGG 0.454064 1_4:-63972624 None:intergenic
GGCATCTACTCAGGCTGCAT+TGG 0.460246 1_4:+63972351 Msa0177120:CDS
AGCGGGTGGTAGTGAAGAAC+TGG 0.460982 1_4:-63962913 None:intergenic
GAATATTTGACTTCCGTGGC+AGG 0.463423 1_4:-63968083 None:intergenic
GAGTGGGGAACACAGTTCTT+CGG 0.463459 1_4:-63968193 None:intergenic
ATCACCTGGACCTGGTTCTC+CGG 0.463700 1_4:+63964127 Msa0177120:CDS
CAGGACCTATCTATTATTAA+CGG 0.464286 1_4:+63963636 Msa0177120:CDS
TGACACCACATTCAACTTTG+AGG 0.465437 1_4:-63971226 None:intergenic
AGAAATGCAGGGGTTCTTAT+GGG 0.469281 1_4:+63967903 Msa0177120:CDS
TGTTGACGTGCCGCATCTCA+TGG 0.470293 1_4:+63972155 Msa0177120:CDS
TGTCCAGACCCTCCTTCGCA+AGG 0.476125 1_4:+63963418 Msa0177120:CDS
TGCGGCACGTCAACAGATCC+AGG 0.484263 1_4:-63972147 None:intergenic
TATTTATTTATGCATGTGCT+TGG 0.484763 1_4:+63972879 Msa0177120:three_prime_UTR
CTTAACTGGTTCTGTGAGGA+TGG 0.485235 1_4:+63971412 Msa0177120:CDS
AAATTCAGCCAAGCCGCATA+AGG 0.485476 1_4:-63971659 None:intergenic
AAGTATATAGCGATGCCGAT+TGG 0.491106 1_4:+63973489 Msa0177120:three_prime_UTR
TTCATTGTACTGTTGAAAGA+TGG 0.491796 1_4:-63973397 None:intergenic
AGCCAAGCCGCATAAGGTGC+TGG 0.493373 1_4:-63971653 None:intergenic
TCAAATTGAAATTACAGCTC+AGG 0.495889 1_4:+63971816 Msa0177120:CDS
CCGAGGCAAACACCCAGAAT+AGG 0.495918 1_4:-63965246 None:intergenic
GTGTGCTTACAAGCTTGATT+TGG 0.495951 1_4:+63972839 Msa0177120:three_prime_UTR
GACATATGAGGCGCAAAGAC+AGG 0.496000 1_4:-63963362 None:intergenic
TCTGGGCATGCCGGAGAACC+AGG 0.496218 1_4:-63964137 None:intergenic
CACTTGGCTGGGCAAGTTGG+TGG 0.497533 1_4:+63968812 Msa0177120:CDS
CTGTGTCACGAGAAATATCT+TGG 0.499662 1_4:+63973104 Msa0177120:three_prime_UTR
CGCACCAAAGTTGAGATCAA+TGG 0.499946 1_4:+63972296 Msa0177120:CDS
GCTTCAGTCATAACATATCC+AGG 0.500944 1_4:-63972685 None:intergenic
CCTATATCTTCTGGGCATGC+CGG 0.500977 1_4:-63964146 None:intergenic
TCAATCATATCGTTATGATA+AGG 0.501529 1_4:+63970283 Msa0177120:CDS
CATTCTACAAGGCCACACTA+TGG 0.502130 1_4:+63967933 Msa0177120:CDS
TTCAATTCCTTGTGAAATTG+GGG 0.505766 1_4:+63972996 Msa0177120:three_prime_UTR
CATGCCGGAGAACCAGGTCC+AGG 0.506647 1_4:-63964131 None:intergenic
GGGTGTTTGCCTCGGACACC+AGG 0.507562 1_4:+63965254 Msa0177120:CDS
ATTCTGTCAGTTGTTTGGAC+AGG 0.509319 1_4:+63968847 Msa0177120:CDS
TCTCACTCAATATCGCAAAC+TGG 0.510459 1_4:+63973283 Msa0177120:three_prime_UTR
AGAGGTTCCTGCAGTTGGAT+AGG 0.511649 1_4:+63971720 Msa0177120:CDS
ATCCAGCACCTTATGCGGCT+TGG 0.512005 1_4:+63971651 Msa0177120:CDS
GGAAATTTGATCACTTGGCT+GGG 0.513958 1_4:+63968801 Msa0177120:CDS
ATGGAGGAAATTTGATCACT+TGG 0.515760 1_4:+63968796 Msa0177120:CDS
TTGCGCCTCATATGTCCTAC+AGG 0.515959 1_4:+63963369 Msa0177120:CDS
GTTAAATATAGAAGAGATGA+AGG 0.516715 1_4:+63973245 Msa0177120:three_prime_UTR
CATCTCTTCTATATTTAACA+GGG 0.517124 1_4:-63973241 None:intergenic
TATCCGCCGTGAAAATCAAA+TGG 0.517625 1_4:-63970323 None:intergenic
ACTGGATGGTGTATGTTCCT+AGG 0.521450 1_4:+63973544 Msa0177120:three_prime_UTR
GTCAAAACAATATTCTTGGA+TGG 0.524146 1_4:+63969475 Msa0177120:CDS
TATGGACAAACTAGAAATGC+AGG 0.525839 1_4:+63967891 Msa0177120:CDS
TGGTGATTCAAAATGATGAT+TGG 0.526558 1_4:+63964045 Msa0177120:CDS
GGTGAAGCTTCCATAGGAGC+TGG 0.526688 1_4:+63972438 Msa0177120:CDS
GCGGATATGTTGGTTACATC+GGG 0.526889 1_4:+63970339 Msa0177120:CDS
TGGCTTAGATATTCAGAGGA+AGG 0.534560 1_4:-63963014 None:intergenic
TTGTTGTACACACAGTTGGT+AGG 0.535722 1_4:+63973351 Msa0177120:three_prime_UTR
TTGATTGTCTTCTTTCCACA+TGG 0.536982 1_4:+63973030 Msa0177120:three_prime_UTR
AATAGCATGAATGCGCGAAA+GGG 0.537276 1_4:-63962991 None:intergenic
GGATAGTTCTTCCACAGAGA+TGG 0.539959 1_4:+63968892 Msa0177120:CDS
GCGAGAGGGTAATGAAATGA+AGG 0.540217 1_4:-63962963 None:intergenic
TCAAATATTGCGTGAATGCA+GGG 0.540876 1_4:+63965218 Msa0177120:CDS
CGTTAATAATAGATAGGTCC+TGG 0.541535 1_4:-63963635 None:intergenic
CTGGACAGCCACAACCCAAT+CGG 0.542424 1_4:-63973504 None:intergenic
AAATCATTGTTGTCTGACCA+TGG 0.543050 1_4:-63972597 None:intergenic
CACTCAATATCGCAAACTGG+TGG 0.543699 1_4:+63973286 Msa0177120:three_prime_UTR
GAGGAAAAGGTGGATCACTT+TGG 0.543864 1_4:+63969182 Msa0177120:CDS
GTCCAGACCCTCCTTCGCAA+GGG 0.544265 1_4:+63963419 Msa0177120:CDS
GATCACTTGGCTGGGCAAGT+TGG 0.544459 1_4:+63968809 Msa0177120:CDS
CGTGAACTGGTTCAGATGCA+TGG 0.546538 1_4:-63966227 None:intergenic
CATGCATCTGAACCAGTTCA+CGG 0.547761 1_4:+63966228 Msa0177120:CDS
AGATGCGAACAAAGATCCAT+TGG 0.548006 1_4:-63963096 None:intergenic
TGATTATTGGCTGAGATGTA+GGG 0.548614 1_4:+63968129 Msa0177120:CDS
TGTCTAAACTATATTAGAGA+TGG 0.549780 1_4:+63971536 Msa0177120:CDS
ACAAGAAACCCTTGCGAAGG+AGG 0.550980 1_4:-63963427 None:intergenic
TACCACCGTTAATAATAGAT+AGG 0.551799 1_4:-63963641 None:intergenic
AAGTTTGATTGATGAACCAA+TGG 0.552226 1_4:-63973465 None:intergenic
GTACAACAAAAGAAATATCT+GGG 0.552962 1_4:-63973337 None:intergenic
TAGCGATGCCGATTGGGTTG+TGG 0.553014 1_4:+63973496 Msa0177120:three_prime_UTR
GGAAAACGTGCTAATTCTGA+TGG 0.553406 1_4:+63968166 Msa0177120:CDS
GGAAGAACTATCCAACCAAA+AGG 0.553464 1_4:-63968882 None:intergenic
ATGCATCTGAACCAGTTCAC+GGG 0.555574 1_4:+63966229 Msa0177120:CDS
GAGAGTGTTGCAACCTGCCA+CGG 0.555850 1_4:+63968070 Msa0177120:CDS
TGTGCCTCACAACCCAGATA+AGG 0.555986 1_4:+63971573 Msa0177120:CDS
CCAACTGCAGGAACCTCTCA+GGG 0.556382 1_4:-63971715 None:intergenic
AAAACAATATTCTTGGATGG+AGG 0.558300 1_4:+63969478 Msa0177120:CDS
CAACAGTTGCCCTTTACAGA+AGG 0.558369 1_4:+63972715 Msa0177120:three_prime_UTR
GGCGGATATGTTGGTTACAT+CGG 0.559365 1_4:+63970338 Msa0177120:CDS
GAATAGCATGAATGCGCGAA+AGG 0.560571 1_4:-63962992 None:intergenic
AACCCAAGAAATAAGTGAGA+TGG 0.561136 1_4:-63973127 None:intergenic
CGTTCAGGTTGTCTGATCAG+AGG 0.561324 1_4:+63969215 Msa0177120:CDS
AGGTGGTGGCCATTTATCAC+TGG 0.563009 1_4:+63969435 Msa0177120:CDS
CTGTGAGGATGGATTTGGAA+AGG 0.565191 1_4:+63971423 Msa0177120:CDS
TGTTCTCGAGGCATCTACTC+AGG 0.566022 1_4:+63972342 Msa0177120:CDS
GCAGTGAAGTTGAGCACAAT+GGG 0.566135 1_4:+63966400 Msa0177120:intron
TCGTTCATGGGAGGAAAAGG+TGG 0.567570 1_4:+63969172 Msa0177120:CDS
CCAGATAAGGAAACCGATTG+AGG 0.569130 1_4:+63971586 Msa0177120:CDS
ACAAAAGTATATTCAAGACT+TGG 0.570604 1_4:+63973190 Msa0177120:three_prime_UTR
AAACCAGAATTTCTACCAGA+AGG 0.570639 1_4:-63966444 None:intergenic
ATGCAAAGGATCCAAAAGAA+TGG 0.571088 1_4:+63972739 Msa0177120:three_prime_UTR
AACCAGTTCACGGGCGTCTG+AGG 0.571689 1_4:+63966238 Msa0177120:CDS
AAGTGCTCATTCCAATAGCA+TGG 0.571695 1_4:+63967730 Msa0177120:CDS
TCTCTTGAAAGTTGTTCTCG+AGG 0.572344 1_4:+63972330 Msa0177120:CDS
ACTCGCCTGTAGGACATATG+AGG 0.572384 1_4:-63963374 None:intergenic
AAGGCCACACTATGGTGTGC+AGG 0.572554 1_4:+63967941 Msa0177120:CDS
TATGATAAGGATGAATATGA+AGG 0.576693 1_4:+63970296 Msa0177120:CDS
AGATCCATTGGCAAATCACG+TGG 0.578652 1_4:-63963084 None:intergenic
AAACTTTGAAGTTGAAATGG+AGG 0.579267 1_4:+63968780 Msa0177120:CDS
GATGTATGTAATCGCCGCGA+TGG 0.582991 1_4:+63963462 Msa0177120:CDS
AGCTTCCATAGGAGCTGGAG+GGG 0.583104 1_4:+63972443 Msa0177120:CDS
GCGCCTGTCATCGAACCACC+AGG 0.583166 1_4:-63972276 None:intergenic
TTTGCTGTTCTTCCCCTGAG+AGG 0.583316 1_4:+63971702 Msa0177120:CDS
TGGCGGTGTAGATTCGAAGC+GGG 0.583842 1_4:-63962930 None:intergenic
AATCATTGTTGTCTGACCAT+GGG 0.587849 1_4:-63972596 None:intergenic
TATCACTCCTATCCAACTGC+AGG 0.588529 1_4:-63971727 None:intergenic
ACAAAACCCTGCTTCTGTAG+AGG 0.589098 1_4:-63963564 None:intergenic
TGAATCATTAGATACCTCCT+TGG 0.590062 1_4:+63973416 Msa0177120:three_prime_UTR
GATTTGGCTTAGATATTCAG+AGG 0.590421 1_4:-63963018 None:intergenic
TCTTGAATATTTGACTTCCG+TGG 0.593391 1_4:-63968087 None:intergenic
GGTGGTTCGATATCATTCGC+TGG 0.593671 1_4:+63967683 Msa0177120:intron
ACTTCCATTTATTGGATCCG+AGG 0.593929 1_4:+63967767 Msa0177120:CDS
TTATCACTGGAAGATTCTGA+AGG 0.594083 1_4:+63969448 Msa0177120:CDS
CAAGAAAATCTACTACTGGA+TGG 0.594774 1_4:+63973530 Msa0177120:three_prime_UTR
CTCCTTGGCACCCCAAAGCG+TGG 0.595100 1_4:+63973431 Msa0177120:three_prime_UTR
AAGAACAGTTGTTATACATG+AGG 0.596678 1_4:+63972416 Msa0177120:CDS
GTTTCCTTATCTGGGTTGTG+AGG 0.596872 1_4:-63971577 None:intergenic
CAAGAAACCCTTGCGAAGGA+GGG 0.597292 1_4:-63963426 None:intergenic
TTCAAAATGATGATTGGACG+TGG 0.599788 1_4:+63964051 Msa0177120:CDS
AACCACGCTTTGGGGTGCCA+AGG 0.600322 1_4:-63973433 None:intergenic
TAGTTTGTCCATAGTCAACA+AGG 0.602079 1_4:-63967881 None:intergenic
GAAATGAAGGATCTTAGTTG+TGG 0.602119 1_4:-63962950 None:intergenic
TAGGCATTGGGTTATGTGCA+TGG 0.603761 1_4:+63966192 Msa0177120:intron
AGCTCGTGGTGCTACTGAGG+AGG 0.604636 1_4:+63971781 Msa0177120:CDS
GATGGGAGTTCAAAAGGTGG+TGG 0.606255 1_4:+63969421 Msa0177120:CDS
CGCGAAAGGGCATTAGCGAG+AGG 0.607101 1_4:-63962978 None:intergenic
GACCTTCTAAGAAATGACCT+TGG 0.607144 1_4:+63972111 Msa0177120:CDS
TCTCCCACGTGATTTGCCAA+TGG 0.607949 1_4:+63963080 Msa0177120:five_prime_UTR
CATGAGGGTGAAGCTTCCAT+AGG 0.610810 1_4:+63972432 Msa0177120:CDS
CAAATGTCCCCAATTTCACA+AGG 0.611101 1_4:-63973003 None:intergenic
AGTTGCAGATTCAAGATGTG+AGG 0.612054 1_4:-63963122 None:intergenic
AGTGATGGGAGTTCAAAAGG+TGG 0.612943 1_4:+63969418 Msa0177120:intron
CAATGGTGAGTACAATTCGT+GGG 0.615391 1_4:+63972205 Msa0177120:CDS
ATCTCTTCTATATTTAACAG+GGG 0.616580 1_4:-63973240 None:intergenic
GCGAAAGGGCATTAGCGAGA+GGG 0.619844 1_4:-63962977 None:intergenic
ACAATGGTGAGTACAATTCG+TGG 0.620395 1_4:+63972204 Msa0177120:CDS
GATAACATCGTATTATCACC+TGG 0.621106 1_4:+63964113 Msa0177120:CDS
AAAGTTCAAGTATTTCACAA+TGG 0.623372 1_4:+63971360 Msa0177120:CDS
TATAGCTCGTGGTGCTACTG+AGG 0.623391 1_4:+63971778 Msa0177120:CDS
GAAGCTTCCATAGGAGCTGG+AGG 0.628682 1_4:+63972441 Msa0177120:CDS
ACTCAATATCGCAAACTGGT+GGG 0.629284 1_4:+63973287 Msa0177120:three_prime_UTR
GTCAAAGCTGCATTTCCTGG+TGG 0.629738 1_4:+63972261 Msa0177120:CDS
GAAACAAGAAACCCTTGCGA+AGG 0.630582 1_4:-63963430 None:intergenic
GAATTGCCTCTACAGAAGCA+GGG 0.631218 1_4:+63963558 Msa0177120:CDS
AGAACAGTTGTTATACATGA+GGG 0.631663 1_4:+63972417 Msa0177120:CDS
TTTCACATACAAAATTACAA+CGG 0.632055 1_4:+63972651 Msa0177120:three_prime_UTR
AAGGAATCCAGCACCTTATG+CGG 0.632251 1_4:+63971646 Msa0177120:CDS
CACGCTTTGGGGTGCCAAGG+AGG 0.632820 1_4:-63973430 None:intergenic
CGGTGTAGATTCGAAGCGGG+TGG 0.633771 1_4:-63962927 None:intergenic
AGGGAAATACCTGGTGTCCG+AGG 0.634630 1_4:-63965263 None:intergenic
CAAAGGATCCAAAAGAATGG+TGG 0.638306 1_4:+63972742 Msa0177120:three_prime_UTR
AAGCTTCCATAGGAGCTGGA+GGG 0.638739 1_4:+63972442 Msa0177120:CDS
TGGGAGTCAAGCATTCTACA+AGG 0.640874 1_4:+63967922 Msa0177120:CDS
AACACCTGCACACCATAGTG+TGG 0.641639 1_4:-63967945 None:intergenic
ACAATGGTTGGATGATACTG+AGG 0.643513 1_4:+63971376 Msa0177120:CDS
AGTTTGATTGATGAACCAAT+GGG 0.646801 1_4:-63973464 None:intergenic
ATGGACAAACTAGAAATGCA+GGG 0.648256 1_4:+63967892 Msa0177120:CDS
TTTCAGTGAAAAGGATCAGG+CGG 0.648387 1_4:+63972071 Msa0177120:intron
ATCGTATTATCACCTGGACC+TGG 0.649380 1_4:+63964119 Msa0177120:CDS
ATTGAGTGAGATCATCGAGA+AGG 0.650885 1_4:-63973271 None:intergenic
CCTTTACAGAAGGAATGCAA+AGG 0.651964 1_4:+63972725 Msa0177120:three_prime_UTR
ATTGTACTTGTCCAAAACCT+CGG 0.653172 1_4:-63967784 None:intergenic
ATGTAGGGCATCATACAACA+AGG 0.653248 1_4:+63968144 Msa0177120:CDS
TGCAGTGAAGTTGAGCACAA+TGG 0.654882 1_4:+63966399 Msa0177120:intron
CGCTCGTGTTTCTTCCATCG+CGG 0.655060 1_4:-63963476 None:intergenic
GTGGCGGTGTAGATTCGAAG+CGG 0.660015 1_4:-63962931 None:intergenic
TGAGCTTAACTGGTTCTGTG+AGG 0.664892 1_4:+63971408 Msa0177120:CDS
ATATGCAACTGTTCACACAA+TGG 0.665606 1_4:+63972188 Msa0177120:CDS
ATTAAGGGTACTATAGCTCG+TGG 0.669637 1_4:+63971767 Msa0177120:CDS
GATTGTACTTCCATGAGATG+CGG 0.673089 1_4:-63972165 None:intergenic
TCATATAGATACCATCTCTG+TGG 0.674627 1_4:-63968903 None:intergenic
TGCGAAACCAGCCTTATGTG+AGG 0.675505 1_4:-63971471 None:intergenic
GTTGAAAGATGGAAATGTCG+TGG 0.675819 1_4:-63973386 None:intergenic
GACCTATCTATTATTAACGG+TGG 0.686149 1_4:+63963639 Msa0177120:CDS
ATGAAGGATCTTAGTTGTGG+CGG 0.692199 1_4:-63962947 None:intergenic
TTATACATACAATATATACC+AGG 0.694546 1_4:+63963617 Msa0177120:CDS
TGGACAAACTAGAAATGCAG+GGG 0.701563 1_4:+63967893 Msa0177120:CDS
AACACATTGCAGAAACCATG+TGG 0.706418 1_4:-63973045 None:intergenic
TTTAGTACATAATAATACTG+AGG 0.714422 1_4:+63968748 Msa0177120:CDS
CAACTGCAGGAACCTCTCAG+GGG 0.714797 1_4:-63971714 None:intergenic
CAGGATCACATACACGACCA+AGG 0.715599 1_4:-63972128 None:intergenic
TATGACCTCAAAGTTGAATG+TGG 0.722703 1_4:+63971221 Msa0177120:CDS
TGTAGGGCATCATACAACAA+GGG 0.725500 1_4:+63968145 Msa0177120:CDS
TCAAAATGATGATTGGACGT+GGG 0.727524 1_4:+63964052 Msa0177120:CDS
GATCCATTGGCAAATCACGT+GGG 0.738660 1_4:-63963083 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATAATTTATGTATT+TGG + chr1_4:63968294-63968313 Msa0177120:intron 10.0%
!!! TTTTATATGATTCTTCTAAA+TGG - chr1_4:63963524-63963543 None:intergenic 15.0%
!!! ATTTTGGATTAGTTTATTTA+TGG + chr1_4:63963748-63963767 Msa0177120:intron 15.0%
!!! TGTTAAAAAAATAGTTTTTG+AGG - chr1_4:63964691-63964710 None:intergenic 15.0%
!! CTTGTAAGAAATATAAAATT+AGG - chr1_4:63964924-63964943 None:intergenic 15.0%
!! TAAAATCATTTGAAGAAAAA+AGG - chr1_4:63965178-63965197 None:intergenic 15.0%
!! TTTAATACAATTTATGAAGA+TGG + chr1_4:63965538-63965557 Msa0177120:intron 15.0%
!! GTATTATGTTTGTATTTAAA+AGG - chr1_4:63965576-63965595 None:intergenic 15.0%
!! AAACATAAAACTCATTTATA+TGG + chr1_4:63965774-63965793 Msa0177120:intron 15.0%
!! AACATAAAACTCATTTATAT+GGG + chr1_4:63965775-63965794 Msa0177120:intron 15.0%
!! AACAAAAAATTTAAGTCAAA+GGG - chr1_4:63965874-63965893 None:intergenic 15.0%
!! AAACAAAAAATTTAAGTCAA+AGG - chr1_4:63965875-63965894 None:intergenic 15.0%
!! TAATATTAAAAATTGGATTG+TGG - chr1_4:63966014-63966033 None:intergenic 15.0%
!! AGTTAAAACTATAAATGAAA+GGG - chr1_4:63966365-63966384 None:intergenic 15.0%
!! TAGTTAAAACTATAAATGAA+AGG - chr1_4:63966366-63966385 None:intergenic 15.0%
!!! TCGAACATTTTTAAAAAATT+TGG + chr1_4:63966515-63966534 Msa0177120:intron 15.0%
!!! TTTTGTTTGGATAAATTTTA+GGG - chr1_4:63967404-63967423 None:intergenic 15.0%
!!! ATTTTGTTTGGATAAATTTT+AGG - chr1_4:63967405-63967424 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + chr1_4:63968300-63968319 Msa0177120:intron 15.0%
!!! GTTTTATTACAAATTTCAAT+TGG + chr1_4:63968628-63968647 Msa0177120:intron 15.0%
!!! ATAAAAAAAGTATCGTAATT+GGG - chr1_4:63970169-63970188 None:intergenic 15.0%
!!! AATAAAAAAAGTATCGTAAT+TGG - chr1_4:63970170-63970189 None:intergenic 15.0%
!!! AAATGATGATGTTTATTTAT+TGG + chr1_4:63971325-63971344 Msa0177120:CDS 15.0%
!!! TATTTGATAATTCAGTAATT+TGG + chr1_4:63971968-63971987 Msa0177120:intron 15.0%
!! GAAAATATAAAATGATTAGT+AGG - chr1_4:63972635-63972654 None:intergenic 15.0%
!! GATGATAAGTACAATAAATT+TGG - chr1_4:63963214-63963233 None:intergenic 20.0%
!! TTATACATACAATATATACC+AGG + chr1_4:63963617-63963636 Msa0177120:CDS 20.0%
!! TTTATTTATGGTCAATCATT+GGG + chr1_4:63963760-63963779 Msa0177120:intron 20.0%
!! TTAAACATCATAATTCACAA+TGG - chr1_4:63964369-63964388 None:intergenic 20.0%
!! TTAACTCATATGATCAAATT+TGG + chr1_4:63964511-63964530 Msa0177120:intron 20.0%
!! CAAATTCTTCAAAATATATG+AGG - chr1_4:63965081-63965100 None:intergenic 20.0%
!!! TTGTTGTTTAATGAAATATG+TGG + chr1_4:63965132-63965151 Msa0177120:intron 20.0%
!!! ACAATTTTGAATAAAGAAGA+GGG - chr1_4:63965285-63965304 None:intergenic 20.0%
!!! TACAATTTTGAATAAAGAAG+AGG - chr1_4:63965286-63965305 None:intergenic 20.0%
!! TTAAATTGTATTGGGAAAAA+GGG - chr1_4:63965309-63965328 None:intergenic 20.0%
!!! TCTACTTTTTTAGAAGATTA+CGG + chr1_4:63965368-63965387 Msa0177120:intron 20.0%
!! ACACAATTTGCAAAATTAAA+AGG - chr1_4:63965397-63965416 None:intergenic 20.0%
!!! CTTAATAGTTCATTTTTCTT+TGG + chr1_4:63965501-63965520 Msa0177120:intron 20.0%
!!! CTTCCAAATATGTTTTTATT+GGG - chr1_4:63965750-63965769 None:intergenic 20.0%
!! ACATAAAACTCATTTATATG+GGG + chr1_4:63965776-63965795 Msa0177120:intron 20.0%
!!! AATTTTTTGTTTCTTTGAGA+AGG + chr1_4:63965883-63965902 Msa0177120:intron 20.0%
!! ACAAAACTTAAACAATAGTT+AGG - chr1_4:63966127-63966146 None:intergenic 20.0%
!!! TGTACATTTAATTTTTTCCT+TGG + chr1_4:63966146-63966165 Msa0177120:intron 20.0%
!! GTTAAAACTATAAATGAAAG+GGG - chr1_4:63966364-63966383 None:intergenic 20.0%
!! GAACGAAAAAATAATGTATT+AGG - chr1_4:63967082-63967101 None:intergenic 20.0%
!! TAAAATTTGAATTGATCAAG+AGG - chr1_4:63967354-63967373 None:intergenic 20.0%
!!! TACAGAAAAGATATTTTGTT+TGG - chr1_4:63967417-63967436 None:intergenic 20.0%
!! GAAATACATACTATAGTAAA+GGG - chr1_4:63967444-63967463 None:intergenic 20.0%
!! TGAAATACATACTATAGTAA+AGG - chr1_4:63967445-63967464 None:intergenic 20.0%
!! AAATCCGAAAAAATTACATA+TGG + chr1_4:63967484-63967503 Msa0177120:intron 20.0%
!! CAAACAATTATTATGATTAG+TGG - chr1_4:63967651-63967670 None:intergenic 20.0%
!! AAATTATTTGATAAGCACAT+AGG - chr1_4:63968422-63968441 None:intergenic 20.0%
!! ATTTATACCGAAATAATTTG+TGG + chr1_4:63968438-63968457 Msa0177120:intron 20.0%
!!! TTTATACCGAAATAATTTGT+GGG + chr1_4:63968439-63968458 Msa0177120:intron 20.0%
!!! AAACCATTTTCTCATTTATA+AGG - chr1_4:63968494-63968513 None:intergenic 20.0%
!! TTTAGTACATAATAATACTG+AGG + chr1_4:63968748-63968767 Msa0177120:CDS 20.0%
!!! GATACACATATTTTTACATT+TGG + chr1_4:63969025-63969044 Msa0177120:intron 20.0%
!!! TTTTCTTGATTATTTGAACA+AGG + chr1_4:63969501-63969520 Msa0177120:CDS 20.0%
!! ATCTAATTTCTATTGTTACT+TGG + chr1_4:63969816-63969835 Msa0177120:intron 20.0%
!! AAAACATTCAAAGTAATACA+TGG - chr1_4:63969976-63969995 None:intergenic 20.0%
!! ATTCAATGTAAGCATTTATT+TGG - chr1_4:63970381-63970400 None:intergenic 20.0%
!! ACTGAATTATCAAATATACT+TGG - chr1_4:63971964-63971983 None:intergenic 20.0%
!!! ACCATTAATTTTTTCCTTTT+TGG + chr1_4:63972573-63972592 Msa0177120:three_prime_UTR 20.0%
!! TTTCACATACAAAATTACAA+CGG + chr1_4:63972651-63972670 Msa0177120:three_prime_UTR 20.0%
!!! ATAGCAAAGATAAATTGTTT+TGG + chr1_4:63972766-63972785 Msa0177120:three_prime_UTR 20.0%
!!! TAGCAAAGATAAATTGTTTT+GGG + chr1_4:63972767-63972786 Msa0177120:three_prime_UTR 20.0%
!! ACAAATTACAATGAAATTGT+TGG - chr1_4:63972971-63972990 None:intergenic 20.0%
! GTTTATTTATGGTCAATCAT+TGG + chr1_4:63963759-63963778 Msa0177120:intron 25.0%
! TTATTTATGGTCAATCATTG+GGG + chr1_4:63963761-63963780 Msa0177120:intron 25.0%
! TACAAGTAAGAATATCAAGA+TGG + chr1_4:63963860-63963879 Msa0177120:intron 25.0%
!!! ATTTTTTCTATTGCTTCTTC+AGG - chr1_4:63964222-63964241 None:intergenic 25.0%
! CTTTAAATGGGATAAAAACA+TGG - chr1_4:63964292-63964311 None:intergenic 25.0%
! TTGATCATATGAGTTAACAA+AGG - chr1_4:63964508-63964527 None:intergenic 25.0%
!! ATCCAGATATATGAGATTTT+AGG + chr1_4:63964551-63964570 Msa0177120:intron 25.0%
!! TCCAGATATATGAGATTTTA+GGG + chr1_4:63964552-63964571 Msa0177120:intron 25.0%
! CAATCTTAAAACAACAACAA+AGG + chr1_4:63964616-63964635 Msa0177120:intron 25.0%
! CACAAATAAATCAACACTTT+AGG + chr1_4:63964663-63964682 Msa0177120:intron 25.0%
! TCTAGTGATAAAAGTTAATC+AGG - chr1_4:63964797-63964816 None:intergenic 25.0%
! ATACTCTTCAATATTCTCAT+CGG + chr1_4:63964958-63964977 Msa0177120:intron 25.0%
! AGTTATACTTACAATTCATG+TGG - chr1_4:63965032-63965051 None:intergenic 25.0%
!! CAAATGATTTTATATGCTTC+AGG + chr1_4:63965186-63965205 Msa0177120:intron 25.0%
! GTTAAATTGTATTGGGAAAA+AGG - chr1_4:63965310-63965329 None:intergenic 25.0%
! GAAAGTGGTTAAATTGTATT+GGG - chr1_4:63965317-63965336 None:intergenic 25.0%
! AGAAAGTGGTTAAATTGTAT+TGG - chr1_4:63965318-63965337 None:intergenic 25.0%
! AATACAATTTAACCACTTTC+TGG + chr1_4:63965317-63965336 Msa0177120:intron 25.0%
!!! CATAATACTTTTGTTTGCTT+CGG + chr1_4:63965588-63965607 Msa0177120:intron 25.0%
! TTAAATGCACTGTTGAAAAT+GGG - chr1_4:63965672-63965691 None:intergenic 25.0%
! ATTAAATGCACTGTTGAAAA+TGG - chr1_4:63965673-63965692 None:intergenic 25.0%
! TAAACACTGTTCACAAAAAT+GGG - chr1_4:63965716-63965735 None:intergenic 25.0%
! GAACCCAATAAAAACATATT+TGG + chr1_4:63965744-63965763 Msa0177120:intron 25.0%
!!! CCTTCCAAATATGTTTTTAT+TGG - chr1_4:63965751-63965770 None:intergenic 25.0%
! CCAATAAAAACATATTTGGA+AGG + chr1_4:63965748-63965767 Msa0177120:intron 25.0%
! ATAACTTTACGCATATCTTA+TGG - chr1_4:63965805-63965824 None:intergenic 25.0%
! TTAAAAATTGGATTGTGGAT+AGG - chr1_4:63966009-63966028 None:intergenic 25.0%
!! ATTCATATTTGAGACATACA+AGG + chr1_4:63966578-63966597 Msa0177120:intron 25.0%
! ACTAAGTTGTATGAAAATCT+TGG + chr1_4:63966674-63966693 Msa0177120:intron 25.0%
!! ATTCTGAATTTTCTTTGACT+TGG + chr1_4:63966700-63966719 Msa0177120:intron 25.0%
!!! TTCTGAATTTTCTTTGACTT+GGG + chr1_4:63966701-63966720 Msa0177120:intron 25.0%
!! GGAAAATATTTTCTTAACAG+AGG + chr1_4:63966722-63966741 Msa0177120:intron 25.0%
! TTATTCTTGTGACTCTTTAA+TGG + chr1_4:63966924-63966943 Msa0177120:intron 25.0%
! TATTCTTGTGACTCTTTAAT+GGG + chr1_4:63966925-63966944 Msa0177120:intron 25.0%
!! AGTGTTTCTTATATTTTCCA+AGG + chr1_4:63967165-63967184 Msa0177120:intron 25.0%
!! GTGTTTCTTATATTTTCCAA+GGG + chr1_4:63967166-63967185 Msa0177120:intron 25.0%
!!! AATTTTAGGGTTTCTAGAAA+TGG - chr1_4:63967391-63967410 None:intergenic 25.0%
!! TACATGTTTTACATGAATGA+TGG - chr1_4:63967527-63967546 None:intergenic 25.0%
! ACAATTATTATGATTAGTGG+TGG - chr1_4:63967648-63967667 None:intergenic 25.0%
!!! CAAATTTGTTGACATAAACA+TGG - chr1_4:63968033-63968052 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG - chr1_4:63968264-63968283 None:intergenic 25.0%
! CATTAACCCACAAATTATTT+CGG - chr1_4:63968448-63968467 None:intergenic 25.0%
! TGACCTTATAAATGAGAAAA+TGG + chr1_4:63968488-63968507 Msa0177120:intron 25.0%
!!! ACAAAACTTTGAAGTTGAAA+TGG + chr1_4:63968777-63968796 Msa0177120:CDS 25.0%
!! GTAAGAGTGTAATAAAAACA+AGG - chr1_4:63969004-63969023 None:intergenic 25.0%
! TTCTGTCAAAACAATATTCT+TGG + chr1_4:63969471-63969490 Msa0177120:CDS 25.0%
! AACTTGATTATGAAGAATGA+GGG - chr1_4:63969661-63969680 None:intergenic 25.0%
! AACTTGATTATGAAGAATGA+GGG - chr1_4:63969661-63969680 None:intergenic 25.0%
! ATAAGGAAAGTCAAAATTTC+TGG + chr1_4:63970074-63970093 Msa0177120:intron 25.0%
! TAAGGAAAGTCAAAATTTCT+GGG + chr1_4:63970075-63970094 Msa0177120:intron 25.0%
!! ATGAATTTTTGTGACATACT+TGG + chr1_4:63970138-63970157 Msa0177120:intron 25.0%
! TCAATCATATCGTTATGATA+AGG + chr1_4:63970283-63970302 Msa0177120:CDS 25.0%
! TATGATAAGGATGAATATGA+AGG + chr1_4:63970296-63970315 Msa0177120:CDS 25.0%
! TTATCAACAAGAACAACAAA+AGG + chr1_4:63970425-63970444 Msa0177120:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + chr1_4:63970595-63970614 Msa0177120:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - chr1_4:63970638-63970657 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + chr1_4:63970637-63970656 Msa0177120:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + chr1_4:63970595-63970614 Msa0177120:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - chr1_4:63970638-63970657 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + chr1_4:63970637-63970656 Msa0177120:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + chr1_4:63970595-63970614 Msa0177120:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - chr1_4:63970638-63970657 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + chr1_4:63970637-63970656 Msa0177120:intron 25.0%
!! GGTCTTGTATATAACAAATA+TGG - chr1_4:63971159-63971178 None:intergenic 25.0%
! AAAGTTCAAGTATTTCACAA+TGG + chr1_4:63971360-63971379 Msa0177120:CDS 25.0%
! TGTCTAAACTATATTAGAGA+TGG + chr1_4:63971536-63971555 Msa0177120:CDS 25.0%
! AGAGAATTTAATACCTCAAT+CGG - chr1_4:63971602-63971621 None:intergenic 25.0%
!! ATTGAGGTATTAAATTCTCT+TGG + chr1_4:63971602-63971621 Msa0177120:CDS 25.0%
! TTTACCTACATTTAAGAGAA+AGG + chr1_4:63971627-63971646 Msa0177120:CDS 25.0%
! CATAGAAAAACCTGTTAAAA+TGG - chr1_4:63971880-63971899 None:intergenic 25.0%
! TATGACTTCAGTTTACATAT+TGG + chr1_4:63971896-63971915 Msa0177120:intron 25.0%
!!! GTTTTTCTTTTTCAGTGAAA+AGG + chr1_4:63972062-63972081 Msa0177120:intron 25.0%
! GCCAAAAAGGAAAAAATTAA+TGG - chr1_4:63972577-63972596 None:intergenic 25.0%
! AAAATGATTAGTAGGACAAA+AGG - chr1_4:63972627-63972646 None:intergenic 25.0%
! TTCACATACAAAATTACAAC+GGG + chr1_4:63972652-63972671 Msa0177120:three_prime_UTR 25.0%
!!! AGCAAAGATAAATTGTTTTG+GGG + chr1_4:63972768-63972787 Msa0177120:three_prime_UTR 25.0%
! TATTTATTTATGCATGTGCT+TGG + chr1_4:63972879-63972898 Msa0177120:three_prime_UTR 25.0%
! TATTCAATTCCTTGTGAAAT+TGG + chr1_4:63972994-63973013 Msa0177120:three_prime_UTR 25.0%
! ATTCAATTCCTTGTGAAATT+GGG + chr1_4:63972995-63973014 Msa0177120:three_prime_UTR 25.0%
! CACAAATAGATACGTTAATA+CGG - chr1_4:63973075-63973094 None:intergenic 25.0%
!! ACAAAAGTATATTCAAGACT+TGG + chr1_4:63973190-63973209 Msa0177120:three_prime_UTR 25.0%
! ATCTCTTCTATATTTAACAG+GGG - chr1_4:63973243-63973262 None:intergenic 25.0%
! CATCTCTTCTATATTTAACA+GGG - chr1_4:63973244-63973263 None:intergenic 25.0%
! TCATCTCTTCTATATTTAAC+AGG - chr1_4:63973245-63973264 None:intergenic 25.0%
! GTTAAATATAGAAGAGATGA+AGG + chr1_4:63973245-63973264 Msa0177120:three_prime_UTR 25.0%
! GTACAACAAAAGAAATATCT+GGG - chr1_4:63973340-63973359 None:intergenic 25.0%
! TGTACAACAAAAGAAATATC+TGG - chr1_4:63973341-63973360 None:intergenic 25.0%
AAAGAAGTTAACGAGAGATT+TGG - chr1_4:63963037-63963056 None:intergenic 30.0%
GAATAAAAAAAACAGAGACG+TGG - chr1_4:63963192-63963211 None:intergenic 30.0%
CAGGACCTATCTATTATTAA+CGG + chr1_4:63963636-63963655 Msa0177120:CDS 30.0%
TACCACCGTTAATAATAGAT+AGG - chr1_4:63963644-63963663 None:intergenic 30.0%
!! TTGAGTTGTAGTATGCATTT+TGG + chr1_4:63963732-63963751 Msa0177120:intron 30.0%
TATTTATGGTCAATCATTGG+GGG + chr1_4:63963762-63963781 Msa0177120:intron 30.0%
TTGTTCTACATGTAAGAGTT+AGG + chr1_4:63963836-63963855 Msa0177120:intron 30.0%
AGTAAGAATATCAAGATGGT+TGG + chr1_4:63963864-63963883 Msa0177120:intron 30.0%
GTAAGAATATCAAGATGGTT+GGG + chr1_4:63963865-63963884 Msa0177120:intron 30.0%
TAAGAATATCAAGATGGTTG+GGG + chr1_4:63963866-63963885 Msa0177120:intron 30.0%
AAGACTATAGTATTCTGTAC+GGG - chr1_4:63963937-63963956 None:intergenic 30.0%
CAAGACTATAGTATTCTGTA+CGG - chr1_4:63963938-63963957 None:intergenic 30.0%
!! AGAAGTTGATGTTACTTGTA+AGG + chr1_4:63963968-63963987 Msa0177120:intron 30.0%
!! TTTATGTCCCTTTTAAAAGC+TGG + chr1_4:63963993-63964012 Msa0177120:intron 30.0%
!! AACCAAACCAGCTTTTAAAA+GGG - chr1_4:63964003-63964022 None:intergenic 30.0%
! AAACCAAACCAGCTTTTAAA+AGG - chr1_4:63964004-63964023 None:intergenic 30.0%
TGGTGATTCAAAATGATGAT+TGG + chr1_4:63964045-63964064 Msa0177120:CDS 30.0%
CTTACCATTGTGAAATACTT+TGG + chr1_4:63964389-63964408 Msa0177120:intron 30.0%
AAAGGTAACAAGTATACTCT+CGG - chr1_4:63964490-63964509 None:intergenic 30.0%
! CCAGATATATGAGATTTTAG+GGG + chr1_4:63964553-63964572 Msa0177120:intron 30.0%
GGGGAATATATTTAGATTTC+AGG + chr1_4:63964572-63964591 Msa0177120:intron 30.0%
! TAACAGATTCATTTAGAGTC+AGG + chr1_4:63964706-63964725 Msa0177120:intron 30.0%
TAGGAACAACTGTATTTAGA+GGG - chr1_4:63964905-63964924 None:intergenic 30.0%
TTAGGAACAACTGTATTTAG+AGG - chr1_4:63964906-63964925 None:intergenic 30.0%
! TGAGGTTGTTTCAAAACATA+TGG - chr1_4:63965007-63965026 None:intergenic 30.0%
! TATGAAGATGGAAAAAGTGT+TGG + chr1_4:63965550-63965569 Msa0177120:intron 30.0%
GTAAACACTGTTCACAAAAA+TGG - chr1_4:63965717-63965736 None:intergenic 30.0%
GAAGGTAGTAAACAATATAG+TGG + chr1_4:63965901-63965920 Msa0177120:intron 30.0%
ATAGGTTCATAATCATGATG+AGG - chr1_4:63965991-63966010 None:intergenic 30.0%
GAAAAAATACTAATCACAGC+AGG - chr1_4:63966071-63966090 None:intergenic 30.0%
TATGACATCTGACAATAGTT+AGG - chr1_4:63966093-63966112 None:intergenic 30.0%
ATTGTGCTCAATTTCTTATG+TGG - chr1_4:63966831-63966850 None:intergenic 30.0%
ATTCTTGTGACTCTTTAATG+GGG + chr1_4:63966926-63966945 Msa0177120:intron 30.0%
!!! TTCTTTTTCAACTATTAGCG+AGG + chr1_4:63967099-63967118 Msa0177120:intron 30.0%
! AGATGTTTGTTGAAATTCTG+AGG + chr1_4:63967281-63967300 Msa0177120:intron 30.0%
!!! GGCACCATATGTAATTTTTT+CGG - chr1_4:63967491-63967510 None:intergenic 30.0%
AATTGTTTGCCACAAATTTC+AGG + chr1_4:63967662-63967681 Msa0177120:intron 30.0%
AATAGGACACTTCCATTTAT+TGG + chr1_4:63967759-63967778 Msa0177120:CDS 30.0%
GAGAGATTACAGATGATTAT+TGG + chr1_4:63968116-63968135 Msa0177120:CDS 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + chr1_4:63968363-63968382 Msa0177120:intron 30.0%
!!! TATCTTGTCCTGTCTTTTTT+AGG + chr1_4:63968532-63968551 Msa0177120:intron 30.0%
!!! ATCTTGTCCTGTCTTTTTTA+GGG + chr1_4:63968533-63968552 Msa0177120:intron 30.0%
TTGACCTTATAAACTAGAGT+GGG + chr1_4:63968575-63968594 Msa0177120:intron 30.0%
!! AATTGGCCTTCAACTTAATA+TGG + chr1_4:63968645-63968664 Msa0177120:intron 30.0%
!! GAACTACCATATTAAGTTGA+AGG - chr1_4:63968654-63968673 None:intergenic 30.0%
!! AAACTTTGAAGTTGAAATGG+AGG + chr1_4:63968780-63968799 Msa0177120:CDS 30.0%
AGTATATTCTGTCAGTTGTT+TGG + chr1_4:63968842-63968861 Msa0177120:CDS 30.0%
AGTGTAATAAAAACAAGGTC+CGG - chr1_4:63968999-63969018 None:intergenic 30.0%
! CATAGGATCTCTTCATATTT+TGG + chr1_4:63969074-63969093 Msa0177120:intron 30.0%
TGAGAAGAATATTGAGATGA+TGG - chr1_4:63969128-63969147 None:intergenic 30.0%
!!! TGCAACTGAAATACTTTTTC+AGG - chr1_4:63969318-63969337 None:intergenic 30.0%
! ATCCATTCGTTTTATAGTGA+TGG + chr1_4:63969403-63969422 Msa0177120:intron 30.0%
! TCCATTCGTTTTATAGTGAT+GGG + chr1_4:63969404-63969423 Msa0177120:intron 30.0%
GTCAAAACAATATTCTTGGA+TGG + chr1_4:63969475-63969494 Msa0177120:CDS 30.0%
AAAACAATATTCTTGGATGG+AGG + chr1_4:63969478-63969497 Msa0177120:CDS 30.0%
ATTAGACTCTATTAGGTGTT+TGG + chr1_4:63969626-63969645 Msa0177120:intron 30.0%
CAACTTGATTATGAAGAATG+AGG - chr1_4:63969662-63969681 None:intergenic 30.0%
AGTTTACACTAGATAGTGTT+TGG + chr1_4:63969682-63969701 Msa0177120:intron 30.0%
CAACTTGATTATGAAGAATG+AGG - chr1_4:63969662-63969681 None:intergenic 30.0%
! ATTTTACTGATCGAAATCAG+AGG - chr1_4:63969952-63969971 None:intergenic 30.0%
TGCAGTTAAGAAACAAAGAA+AGG + chr1_4:63970012-63970031 Msa0177120:intron 30.0%
GCAGTTAAGAAACAAAGAAA+GGG + chr1_4:63970013-63970032 Msa0177120:intron 30.0%
CAGTTAAGAAACAAAGAAAG+GGG + chr1_4:63970014-63970033 Msa0177120:intron 30.0%
TGCAGCAAAAAAATACATAC+AGG - chr1_4:63970115-63970134 None:intergenic 30.0%
AGACAGTAACAAAAAGGAAA+AGG - chr1_4:63970224-63970243 None:intergenic 30.0%
TTAAGGCAACATATTTACGA+GGG - chr1_4:63970247-63970266 None:intergenic 30.0%
ATTAAGGCAACATATTTACG+AGG - chr1_4:63970248-63970267 None:intergenic 30.0%
TCAGATTATGCAAAACTTTC+TGG - chr1_4:63970488-63970507 None:intergenic 30.0%
! AAGTTTTGCATAATCTGACA+AGG + chr1_4:63970490-63970509 Msa0177120:intron 30.0%
! AGTTTTGCATAATCTGACAA+GGG + chr1_4:63970491-63970510 Msa0177120:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - chr1_4:63970593-63970612 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - chr1_4:63970594-63970613 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + chr1_4:63970594-63970613 Msa0177120:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG + chr1_4:63970646-63970665 Msa0177120:intron 30.0%
GAAATCCAGATCATAATTTG+TGG + chr1_4:63970696-63970715 Msa0177120:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - chr1_4:63970593-63970612 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - chr1_4:63970594-63970613 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + chr1_4:63970594-63970613 Msa0177120:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG + chr1_4:63970646-63970665 Msa0177120:intron 30.0%
GAAATCCAGATCATAATTTG+TGG + chr1_4:63970696-63970715 Msa0177120:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - chr1_4:63970593-63970612 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - chr1_4:63970594-63970613 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + chr1_4:63970594-63970613 Msa0177120:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG + chr1_4:63970646-63970665 Msa0177120:intron 30.0%
GAAATCCAGATCATAATTTG+TGG + chr1_4:63970696-63970715 Msa0177120:intron 30.0%
! TATTTGTTAGTTCACTTGAG+AGG - chr1_4:63971180-63971199 None:intergenic 30.0%
! TAATTGATTTCCTATGTTGC+AGG + chr1_4:63971198-63971217 Msa0177120:intron 30.0%
TTCAAGTATTTCACAATGGT+TGG + chr1_4:63971364-63971383 Msa0177120:CDS 30.0%
TTATGTGAGGAAAAAGTTGA+AGG - chr1_4:63971461-63971480 None:intergenic 30.0%
!! TTCAACTTTTTCCTCACATA+AGG + chr1_4:63971460-63971479 Msa0177120:CDS 30.0%
GATTCCTTTCTCTTAAATGT+AGG - chr1_4:63971634-63971653 None:intergenic 30.0%
TCAAATTGAAATTACAGCTC+AGG + chr1_4:63971816-63971835 Msa0177120:CDS 30.0%
AACCTGTTAAAATGGTGATA+GGG - chr1_4:63971872-63971891 None:intergenic 30.0%
AAACCTGTTAAAATGGTGAT+AGG - chr1_4:63971873-63971892 None:intergenic 30.0%
TCATGACAAAAAACATAGCA+AGG - chr1_4:63971931-63971950 None:intergenic 30.0%
AAGAACAGTTGTTATACATG+AGG + chr1_4:63972416-63972435 Msa0177120:CDS 30.0%
AGAACAGTTGTTATACATGA+GGG + chr1_4:63972417-63972436 Msa0177120:CDS 30.0%
TTCAATTCCTTGTGAAATTG+GGG + chr1_4:63972996-63973015 Msa0177120:three_prime_UTR 30.0%
TTCATTGTACTGTTGAAAGA+TGG - chr1_4:63973400-63973419 None:intergenic 30.0%
AAAAAATAAACCACGCTTTG+GGG - chr1_4:63973444-63973463 None:intergenic 30.0%
GAAAAAATAAACCACGCTTT+GGG - chr1_4:63973445-63973464 None:intergenic 30.0%
AGTTTGATTGATGAACCAAT+GGG - chr1_4:63973467-63973486 None:intergenic 30.0%
AAGTTTGATTGATGAACCAA+TGG - chr1_4:63973468-63973487 None:intergenic 30.0%
ATGAAATATGAGCATTTCCT+AGG - chr1_4:63973564-63973583 None:intergenic 30.0%
TAGGAAATGCTCATATTTCA+TGG + chr1_4:63973563-63973582 Msa0177120:three_prime_UTR 30.0%
GAAATGAAGGATCTTAGTTG+TGG - chr1_4:63962953-63962972 None:intergenic 35.0%
! GATTTGGCTTAGATATTCAG+AGG - chr1_4:63963021-63963040 None:intergenic 35.0%
!! GCTATTTTGTTGTGTGAAAG+AGG - chr1_4:63963148-63963167 None:intergenic 35.0%
CGTTAATAATAGATAGGTCC+TGG - chr1_4:63963638-63963657 None:intergenic 35.0%
GACCTATCTATTATTAACGG+TGG + chr1_4:63963639-63963658 Msa0177120:CDS 35.0%
TTTACCATCCACGTTCAAAT+TGG - chr1_4:63963699-63963718 None:intergenic 35.0%
ATTTATGGTCAATCATTGGG+GGG + chr1_4:63963763-63963782 Msa0177120:intron 35.0%
AAGAATATCAAGATGGTTGG+GGG + chr1_4:63963867-63963886 Msa0177120:intron 35.0%
CGTACAGAATACTATAGTCT+TGG + chr1_4:63963936-63963955 Msa0177120:intron 35.0%
! TCATCATTTTGAATCACCAC+AGG - chr1_4:63964044-63964063 None:intergenic 35.0%
TTCAAAATGATGATTGGACG+TGG + chr1_4:63964051-63964070 Msa0177120:CDS 35.0%
TCAAAATGATGATTGGACGT+GGG + chr1_4:63964052-63964071 Msa0177120:CDS 35.0%
GATAACATCGTATTATCACC+TGG + chr1_4:63964113-63964132 Msa0177120:CDS 35.0%
GATTCTCACCTATATCTTCT+GGG - chr1_4:63964157-63964176 None:intergenic 35.0%
TGATTCTCACCTATATCTTC+TGG - chr1_4:63964158-63964177 None:intergenic 35.0%
GAAGATATAGGTGAGAATCA+TGG + chr1_4:63964158-63964177 Msa0177120:intron 35.0%
! TAGGTGAGAATCATGGATTT+TGG + chr1_4:63964165-63964184 Msa0177120:intron 35.0%
TGGCTCAAGAAATAGGTTAA+AGG + chr1_4:63964439-63964458 Msa0177120:intron 35.0%
GGCTCAAGAAATAGGTTAAA+GGG + chr1_4:63964440-63964459 Msa0177120:intron 35.0%
!!! GGGATACTTTTTTATTGGCA+TGG - chr1_4:63964469-63964488 None:intergenic 35.0%
!!! CTCTCGGGATACTTTTTTAT+TGG - chr1_4:63964474-63964493 None:intergenic 35.0%
AAGGTAACAAGTATACTCTC+GGG - chr1_4:63964489-63964508 None:intergenic 35.0%
! AAATTTGGTCTTCACATCTG+TGG + chr1_4:63964526-63964545 Msa0177120:intron 35.0%
CCCCTAAAATCTCATATATC+TGG - chr1_4:63964556-63964575 None:intergenic 35.0%
TCGCATGAACAAAACATCTT+AGG + chr1_4:63964836-63964855 Msa0177120:intron 35.0%
AACTGTATTTAGAGGGAAGT+TGG - chr1_4:63964898-63964917 None:intergenic 35.0%
TCATCGGTATCACAATCAAA+GGG + chr1_4:63964974-63964993 Msa0177120:intron 35.0%
CTTACAATTCATGTGGTTTG+AGG - chr1_4:63965025-63965044 None:intergenic 35.0%
!! ACACCTGCATATGTTTTGAA+AGG + chr1_4:63965052-63965071 Msa0177120:intron 35.0%
TGTCCTTTCAAAACATATGC+AGG - chr1_4:63965058-63965077 None:intergenic 35.0%
TTCAAATATTGCGTGAATGC+AGG + chr1_4:63965217-63965236 Msa0177120:CDS 35.0%
TCAAATATTGCGTGAATGCA+GGG + chr1_4:63965218-63965237 Msa0177120:CDS 35.0%
ATAAAGAAGAGGGAAATACC+TGG - chr1_4:63965275-63965294 None:intergenic 35.0%
! TAGAAAGTGCAACACATTGA+AGG - chr1_4:63965352-63965371 None:intergenic 35.0%
!!! AAGTCAAAGGGCATTTTTCT+TGG - chr1_4:63965862-63965881 None:intergenic 35.0%
!! TCAAAGCATTGACATACATC+AGG - chr1_4:63965937-63965956 None:intergenic 35.0%
TCAATGCTTTGATAAGACGA+TGG + chr1_4:63965945-63965964 Msa0177120:intron 35.0%
TAAGACGATGGAGAAAATGT+TGG + chr1_4:63965957-63965976 Msa0177120:intron 35.0%
TATATTCATTCTCCTGAGTG+TGG - chr1_4:63966298-63966317 None:intergenic 35.0%
ATACCTTCTGGTAGAAATTC+TGG + chr1_4:63966441-63966460 Msa0177120:CDS 35.0%
AAACCAGAATTTCTACCAGA+AGG - chr1_4:63966447-63966466 None:intergenic 35.0%
!! TGGTAGAAATTCTGGTTTCA+AGG + chr1_4:63966449-63966468 Msa0177120:CDS 35.0%
!! TAGAAATTCTGGTTTCAAGG+TGG + chr1_4:63966452-63966471 Msa0177120:intron 35.0%
!! AGAAATTCTGGTTTCAAGGT+GGG + chr1_4:63966453-63966472 Msa0177120:intron 35.0%
ATACAAGGAATTCAGATGCT+AGG + chr1_4:63966593-63966612 Msa0177120:intron 35.0%
TACAACTTAGTCCACAATTG+CGG - chr1_4:63966665-63966684 None:intergenic 35.0%
!!! TGGGAAAATCGGATTTTTTG+AGG - chr1_4:63966768-63966787 None:intergenic 35.0%
ATTAGTTGCAGGAAGAATCT+GGG - chr1_4:63966787-63966806 None:intergenic 35.0%
AAGCTATCTTCATTAGTTGC+AGG - chr1_4:63966798-63966817 None:intergenic 35.0%
TGCAACTAATGAAGATAGCT+TGG + chr1_4:63966797-63966816 Msa0177120:intron 35.0%
! GTGTTCGTTTTACAAACAAG+TGG + chr1_4:63966869-63966888 Msa0177120:intron 35.0%
TTACAAACAAGTGGCACATT+TGG + chr1_4:63966878-63966897 Msa0177120:intron 35.0%
TTCTTGTGACTCTTTAATGG+GGG + chr1_4:63966927-63966946 Msa0177120:intron 35.0%
TTTCTTCACCAATATGCAGA+AGG + chr1_4:63966950-63966969 Msa0177120:intron 35.0%
ACTGTAATCCTTCTGCATAT+TGG - chr1_4:63966961-63966980 None:intergenic 35.0%
!!! TTTTCCGTCTCCTTTGTTTT+AGG + chr1_4:63967018-63967037 Msa0177120:intron 35.0%
GAGAAATCCTCCTAAAACAA+AGG - chr1_4:63967031-63967050 None:intergenic 35.0%
TTAGGAGAGAAGAATAATGC+AGG - chr1_4:63967064-63967083 None:intergenic 35.0%
TTCAACTATTAGCGAGGATA+AGG + chr1_4:63967105-63967124 Msa0177120:intron 35.0%
! GAAGACGTTTTTGTTCTAGT+TGG + chr1_4:63967127-63967146 Msa0177120:intron 35.0%
!! ACGTTTTTGTTCTAGTTGGT+GGG + chr1_4:63967131-63967150 Msa0177120:intron 35.0%
GAGTATACCAATACTTTCAG+TGG - chr1_4:63967258-63967277 None:intergenic 35.0%
! GAAAGTTTGATTCGTGTGTT+CGG + chr1_4:63967303-63967322 Msa0177120:intron 35.0%
! CTATTTGAAGTCCATGCTAT+TGG - chr1_4:63967744-63967763 None:intergenic 35.0%
CAATAGCATGGACTTCAAAT+AGG + chr1_4:63967742-63967761 Msa0177120:CDS 35.0%
AAAACCTCGGATCCAATAAA+TGG - chr1_4:63967774-63967793 None:intergenic 35.0%
! ATTTATTGGATCCGAGGTTT+TGG + chr1_4:63967773-63967792 Msa0177120:CDS 35.0%
ATTGTACTTGTCCAAAACCT+CGG - chr1_4:63967787-63967806 None:intergenic 35.0%
CTTCAGGCAAAAATGAATCA+AGG - chr1_4:63967842-63967861 None:intergenic 35.0%
! TAGTTTGTCCATAGTCAACA+AGG - chr1_4:63967884-63967903 None:intergenic 35.0%
TATGGACAAACTAGAAATGC+AGG + chr1_4:63967891-63967910 Msa0177120:CDS 35.0%
ATGGACAAACTAGAAATGCA+GGG + chr1_4:63967892-63967911 Msa0177120:CDS 35.0%
! TCTTGAATATTTGACTTCCG+TGG - chr1_4:63968090-63968109 None:intergenic 35.0%
! ATGATTATTGGCTGAGATGT+AGG + chr1_4:63968128-63968147 Msa0177120:CDS 35.0%
! TGATTATTGGCTGAGATGTA+GGG + chr1_4:63968129-63968148 Msa0177120:CDS 35.0%
! GAAAAATCTTTTACTCCCTC+CGG + chr1_4:63968237-63968256 Msa0177120:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - chr1_4:63968259-63968278 None:intergenic 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + chr1_4:63968368-63968387 Msa0177120:intron 35.0%
AACTAGACCCTAAAAAAGAC+AGG - chr1_4:63968543-63968562 None:intergenic 35.0%
CTTGACCTTATAAACTAGAG+TGG + chr1_4:63968574-63968593 Msa0177120:intron 35.0%
! AGATCCCACTCTAGTTTATA+AGG - chr1_4:63968582-63968601 None:intergenic 35.0%
CTAAAGAAAGTTTACTGCTC+AGG - chr1_4:63968688-63968707 None:intergenic 35.0%
ATGGAGGAAATTTGATCACT+TGG + chr1_4:63968796-63968815 Msa0177120:CDS 35.0%
TCATATAGATACCATCTCTG+TGG - chr1_4:63968906-63968925 None:intergenic 35.0%
GTGTAATAAAAACAAGGTCC+GGG - chr1_4:63968998-63969017 None:intergenic 35.0%
CCTATGTTGATCTATGTTTC+TGG - chr1_4:63969060-63969079 None:intergenic 35.0%
CCAGAAACATAGATCAACAT+AGG + chr1_4:63969057-63969076 Msa0177120:intron 35.0%
AATATTCTTCTCATCCCGAT+AGG + chr1_4:63969135-63969154 Msa0177120:intron 35.0%
ATATTCTTCTCATCCCGATA+GGG + chr1_4:63969136-63969155 Msa0177120:intron 35.0%
CTATTATCAATACCAAAGCG+TGG - chr1_4:63969355-63969374 None:intergenic 35.0%
TCCCATCACTATAAAACGAA+TGG - chr1_4:63969408-63969427 None:intergenic 35.0%
! TATAGTGATGGGAGTTCAAA+AGG + chr1_4:63969415-63969434 Msa0177120:intron 35.0%
CAGAATCTTCCAGTGATAAA+TGG - chr1_4:63969447-63969466 None:intergenic 35.0%
TTATCACTGGAAGATTCTGA+AGG + chr1_4:63969448-63969467 Msa0177120:CDS 35.0%
GGTATATACTGAAGCTATGT+TGG + chr1_4:63969522-63969541 Msa0177120:intron 35.0%
TCTAACAATATGCATGTCCT+GGG - chr1_4:63969591-63969610 None:intergenic 35.0%
! ACGTGCTATTAGACTCTATT+AGG + chr1_4:63969619-63969638 Msa0177120:intron 35.0%
TATGAAGAATGAGGGTAACA+AGG - chr1_4:63969653-63969672 None:intergenic 35.0%
TATGAAGAATGAGGGTAACA+AGG - chr1_4:63969653-63969672 None:intergenic 35.0%
TATAATGCTCTTGCATGAAG+TGG + chr1_4:63969786-63969805 Msa0177120:intron 35.0%
GCAATTCTGTTGGAGAAAAA+GGG - chr1_4:63969850-63969869 None:intergenic 35.0%
AGCAATTCTGTTGGAGAAAA+AGG - chr1_4:63969851-63969870 None:intergenic 35.0%
GGTACAAAAAGCAATTCTGT+TGG - chr1_4:63969860-63969879 None:intergenic 35.0%
!!! TTGCTTTTTGTACCCTAAAC+AGG + chr1_4:63969866-63969885 Msa0177120:intron 35.0%
TGTACCCTAAACAGGAAATA+TGG + chr1_4:63969874-63969893 Msa0177120:intron 35.0%
GCTACCATATTTCCTGTTTA+GGG - chr1_4:63969881-63969900 None:intergenic 35.0%
AGCTACCATATTTCCTGTTT+AGG - chr1_4:63969882-63969901 None:intergenic 35.0%
TTAAGAAACAAAGAAAGGGG+TGG + chr1_4:63970017-63970036 Msa0177120:intron 35.0%
TAAGAAACAAAGAAAGGGGT+GGG + chr1_4:63970018-63970037 Msa0177120:intron 35.0%
ACGATAGATGATAGGTAAAC+AGG + chr1_4:63970043-63970062 Msa0177120:intron 35.0%
GTAAACAGGACAAAGACATA+AGG + chr1_4:63970057-63970076 Msa0177120:intron 35.0%
TGTTGCCTTAATAATGTCAC+AGG + chr1_4:63970256-63970275 Msa0177120:intron 35.0%
AAGCTCCTGTGACATTATTA+AGG - chr1_4:63970264-63970283 None:intergenic 35.0%
!! GGTCTACCATTTGATTTTCA+CGG + chr1_4:63970317-63970336 Msa0177120:CDS 35.0%
!! AGGACAATGAATTTGCTGAT+TGG - chr1_4:63970570-63970589 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - chr1_4:63970704-63970723 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - chr1_4:63970704-63970723 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - chr1_4:63970704-63970723 None:intergenic 35.0%
TATGACCTCAAAGTTGAATG+TGG + chr1_4:63971221-63971240 Msa0177120:CDS 35.0%
!!! CTGGAGTTTTAGATTTGTGA+TGG - chr1_4:63971259-63971278 None:intergenic 35.0%
GCAAAGAAAAAACATGCATC+TGG - chr1_4:63971278-63971297 None:intergenic 35.0%
GACACTTCTTAACATCTCTA+AGG - chr1_4:63971520-63971539 None:intergenic 35.0%
CAAATACACAGATCTTCCTT+TGG - chr1_4:63971686-63971705 None:intergenic 35.0%
!! TTCCCTATCACCATTTTAAC+AGG + chr1_4:63971867-63971886 Msa0177120:intron 35.0%
AGACTCGTTGAAATCCTATT+TGG + chr1_4:63972000-63972019 Msa0177120:intron 35.0%
!!! CTTTTTCAGTGAAAAGGATC+AGG + chr1_4:63972068-63972087 Msa0177120:intron 35.0%
TTAGAAGGTCAACAATCATC+AGG - chr1_4:63972101-63972120 None:intergenic 35.0%
ATATGCAACTGTTCACACAA+TGG + chr1_4:63972188-63972207 Msa0177120:CDS 35.0%
AGTTCCATTGATCTCAACTT+TGG - chr1_4:63972303-63972322 None:intergenic 35.0%
TAATCTATCACAGTGTTTGC+TGG - chr1_4:63972531-63972550 None:intergenic 35.0%
!!! ATTTTTTCCTTTTTGGCCCA+TGG + chr1_4:63972580-63972599 Msa0177120:three_prime_UTR 35.0%
AATCATTGTTGTCTGACCAT+GGG - chr1_4:63972599-63972618 None:intergenic 35.0%
AAATCATTGTTGTCTGACCA+TGG - chr1_4:63972600-63972619 None:intergenic 35.0%
CTTTGCATTCCTTCTGTAAA+GGG - chr1_4:63972727-63972746 None:intergenic 35.0%
ATGCAAAGGATCCAAAAGAA+TGG + chr1_4:63972739-63972758 Msa0177120:three_prime_UTR 35.0%
! TTGCTATACCACCATTCTTT+TGG - chr1_4:63972753-63972772 None:intergenic 35.0%
!!! AGATAAATTGTTTTGGGGTG+AGG + chr1_4:63972773-63972792 Msa0177120:three_prime_UTR 35.0%
TTGATTGTCTTCTTTCCACA+TGG + chr1_4:63973030-63973049 Msa0177120:three_prime_UTR 35.0%
AACCCAAGAAATAAGTGAGA+TGG - chr1_4:63973130-63973149 None:intergenic 35.0%
! CACTTATTTCTTGGGTTTAG+AGG + chr1_4:63973133-63973152 Msa0177120:three_prime_UTR 35.0%
!! TCTTTTGTTGTACACACAGT+TGG + chr1_4:63973347-63973366 Msa0177120:three_prime_UTR 35.0%
TGAATCATTAGATACCTCCT+TGG + chr1_4:63973416-63973435 Msa0177120:three_prime_UTR 35.0%
GGAAAAAATAAACCACGCTT+TGG - chr1_4:63973446-63973465 None:intergenic 35.0%
!!! CGTGGTTTATTTTTTCCCAT+TGG + chr1_4:63973449-63973468 Msa0177120:three_prime_UTR 35.0%
! GTAGTAGATTTTCTTGTGTC+TGG - chr1_4:63973526-63973545 None:intergenic 35.0%
GACACAAGAAAATCTACTAC+TGG + chr1_4:63973526-63973545 Msa0177120:three_prime_UTR 35.0%
CAAGAAAATCTACTACTGGA+TGG + chr1_4:63973530-63973549 Msa0177120:three_prime_UTR 35.0%
ATGAAGGATCTTAGTTGTGG+CGG - chr1_4:63962950-63962969 None:intergenic 40.0%
AATAGCATGAATGCGCGAAA+GGG - chr1_4:63962994-63963013 None:intergenic 40.0%
TGGCTTAGATATTCAGAGGA+AGG - chr1_4:63963017-63963036 None:intergenic 40.0%
AGATGCGAACAAAGATCCAT+TGG - chr1_4:63963099-63963118 None:intergenic 40.0%
AGTTGCAGATTCAAGATGTG+AGG - chr1_4:63963125-63963144 None:intergenic 40.0%
! ACATTTTTGTACTCGCCTGT+AGG - chr1_4:63963387-63963406 None:intergenic 40.0%
CTAAATGGTCATGCGTCAAT+TGG - chr1_4:63963509-63963528 None:intergenic 40.0%
TTCTGTCTCCAATTTGAACG+TGG + chr1_4:63963688-63963707 Msa0177120:intron 40.0%
!! GTCCCTTTTAAAAGCTGGTT+TGG + chr1_4:63963998-63964017 Msa0177120:intron 40.0%
! CATTTTGAATCACCACAGGA+GGG - chr1_4:63964040-63964059 None:intergenic 40.0%
! TCATTTTGAATCACCACAGG+AGG - chr1_4:63964041-63964060 None:intergenic 40.0%
TCTGTAAATGTCCGTTTGAG+TGG + chr1_4:63964257-63964276 Msa0177120:intron 40.0%
GGACTATAGATCCACTCAAA+CGG - chr1_4:63964271-63964290 None:intergenic 40.0%
TGACTCGCAGGTCTTTAAAT+GGG - chr1_4:63964304-63964323 None:intergenic 40.0%
ATGACTCGCAGGTCTTTAAA+TGG - chr1_4:63964305-63964324 None:intergenic 40.0%
CAAATCATACAATGACTCGC+AGG - chr1_4:63964316-63964335 None:intergenic 40.0%
CATTGTTGATCTACCACATG+TGG + chr1_4:63964343-63964362 Msa0177120:intron 40.0%
TAATTCACAATGGCCACATG+TGG - chr1_4:63964359-63964378 None:intergenic 40.0%
! GGCACCAAAGTATTTCACAA+TGG - chr1_4:63964396-63964415 None:intergenic 40.0%
AACAAAGGCTTTGCACTAGA+CGG + chr1_4:63964631-63964650 Msa0177120:intron 40.0%
! TGCGAGAAGAAGATTAGTCA+AGG - chr1_4:63964821-63964840 None:intergenic 40.0%
CTCATCGGTATCACAATCAA+AGG + chr1_4:63964973-63964992 Msa0177120:intron 40.0%
CATCGGTATCACAATCAAAG+GGG + chr1_4:63964975-63964994 Msa0177120:intron 40.0%
ATCGGTATCACAATCAAAGG+GGG + chr1_4:63964976-63964995 Msa0177120:intron 40.0%
ATGCAGGGATATTCCTATTC+TGG + chr1_4:63965233-63965252 Msa0177120:CDS 40.0%
TGCAGGGATATTCCTATTCT+GGG + chr1_4:63965234-63965253 Msa0177120:CDS 40.0%
GCACTGCATGTCTTGAATTT+CGG + chr1_4:63965445-63965464 Msa0177120:intron 40.0%
ATTGTGTAATTGCCACACTC+AGG + chr1_4:63966283-63966302 Msa0177120:intron 40.0%
!!! AATGGGTGCCAACTTTTTCA+GGG + chr1_4:63966417-63966436 Msa0177120:CDS 40.0%
AAGGTATGCCCTGAAAAAGT+TGG - chr1_4:63966428-63966447 None:intergenic 40.0%
CAGGAAGAATCTGGGAAAAT+CGG - chr1_4:63966779-63966798 None:intergenic 40.0%
CATTAGTTGCAGGAAGAATC+TGG - chr1_4:63966788-63966807 None:intergenic 40.0%
TCCTCCTAAAACAAAGGAGA+CGG - chr1_4:63967025-63967044 None:intergenic 40.0%
!! GACGTTTTTGTTCTAGTTGG+TGG + chr1_4:63967130-63967149 Msa0177120:intron 40.0%
TTTCCAAGGGAAAGAGATGT+CGG + chr1_4:63967179-63967198 Msa0177120:intron 40.0%
! TGAAGTGCCACTGAAAGTAT+TGG + chr1_4:63967248-63967267 Msa0177120:intron 40.0%
TTACATGAATGATGGCACTG+CGG - chr1_4:63967519-63967538 None:intergenic 40.0%
TGTTTGCCACAAATTTCAGG+TGG + chr1_4:63967665-63967684 Msa0177120:intron 40.0%
ATCGAACCACCTGAAATTTG+TGG - chr1_4:63967674-63967693 None:intergenic 40.0%
AAGTGCTCATTCCAATAGCA+TGG + chr1_4:63967730-63967749 Msa0177120:CDS 40.0%
ACTTCCATTTATTGGATCCG+AGG + chr1_4:63967767-63967786 Msa0177120:CDS 40.0%
!!! GAGGTTTTGGACAAGTACAA+TGG + chr1_4:63967786-63967805 Msa0177120:CDS 40.0%
!! GATTCATTTTTGCCTGAAGC+AGG + chr1_4:63967843-63967862 Msa0177120:CDS 40.0%
! TTTTTGCCTGAAGCAGGAAA+CGG + chr1_4:63967849-63967868 Msa0177120:CDS 40.0%
!! AGTTCAAGCCTTGTTGACTA+TGG + chr1_4:63967873-63967892 Msa0177120:CDS 40.0%
! ATGTAGGGCATCATACAACA+AGG + chr1_4:63968144-63968163 Msa0177120:CDS 40.0%
! TGTAGGGCATCATACAACAA+GGG + chr1_4:63968145-63968164 Msa0177120:CDS 40.0%
GGAAAACGTGCTAATTCTGA+TGG + chr1_4:63968166-63968185 Msa0177120:CDS 40.0%
! TTTCTAGTGTGTGCATGAGT+GGG - chr1_4:63968212-63968231 None:intergenic 40.0%
!! TTTTCTAGTGTGTGCATGAG+TGG - chr1_4:63968213-63968232 None:intergenic 40.0%
GTGAATTGTAATACTCCCTC+CGG - chr1_4:63968390-63968409 None:intergenic 40.0%
AGGAAATTTGATCACTTGGC+TGG + chr1_4:63968800-63968819 Msa0177120:CDS 40.0%
GGAAATTTGATCACTTGGCT+GGG + chr1_4:63968801-63968820 Msa0177120:CDS 40.0%
ATTCTGTCAGTTGTTTGGAC+AGG + chr1_4:63968847-63968866 Msa0177120:CDS 40.0%
! AGGAAGCTGAAAACACCTTT+TGG + chr1_4:63968867-63968886 Msa0177120:CDS 40.0%
! AGCTGAAAACACCTTTTGGT+TGG + chr1_4:63968871-63968890 Msa0177120:CDS 40.0%
GGAAGAACTATCCAACCAAA+AGG - chr1_4:63968885-63968904 None:intergenic 40.0%
ATAAAAACAAGGTCCGGGAA+TGG - chr1_4:63968993-63969012 None:intergenic 40.0%
! TTTTCGTTCATGGGAGGAAA+AGG + chr1_4:63969169-63969188 Msa0177120:CDS 40.0%
TTTGGAAGCAGTTAACGTTC+AGG + chr1_4:63969200-63969219 Msa0177120:CDS 40.0%
AAAGCGTGGAAAGATTAGAC+TGG - chr1_4:63969341-63969360 None:intergenic 40.0%
AGTCTAATCTTTCCACGCTT+TGG + chr1_4:63969340-63969359 Msa0177120:intron 40.0%
TAACAATATGCATGTCCTGG+GGG - chr1_4:63969589-63969608 None:intergenic 40.0%
CTAACAATATGCATGTCCTG+GGG - chr1_4:63969590-63969609 None:intergenic 40.0%
CTCTAACAATATGCATGTCC+TGG - chr1_4:63969592-63969611 None:intergenic 40.0%
CTCGAATCATGTACTAGCAT+AGG - chr1_4:63969764-63969783 None:intergenic 40.0%
ATTCTGTTGGAGAAAAAGGG+CGG - chr1_4:63969847-63969866 None:intergenic 40.0%
GATCGAAATCAGAGGAGAAT+GGG - chr1_4:63969944-63969963 None:intergenic 40.0%
TGATCGAAATCAGAGGAGAA+TGG - chr1_4:63969945-63969964 None:intergenic 40.0%
!! CTACCATTTGATTTTCACGG+CGG + chr1_4:63970320-63970339 Msa0177120:CDS 40.0%
TATCCGCCGTGAAAATCAAA+TGG - chr1_4:63970326-63970345 None:intergenic 40.0%
! ATATGTTGGTTACATCGGGT+AGG + chr1_4:63970343-63970362 Msa0177120:intron 40.0%
!! AACTTTCTGGCTGATGCTTT+AGG - chr1_4:63970475-63970494 None:intergenic 40.0%
!! TGCATCAAGCTTTGAAGACA+TGG - chr1_4:63970525-63970544 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - chr1_4:63970590-63970609 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + chr1_4:63970600-63970619 Msa0177120:intron 40.0%
! TTCCAACTTACTTTGAGGGA+GGG - chr1_4:63970589-63970608 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - chr1_4:63970590-63970609 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + chr1_4:63970600-63970619 Msa0177120:intron 40.0%
! TTCCAACTTACTTTGAGGGA+GGG - chr1_4:63970589-63970608 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - chr1_4:63970590-63970609 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + chr1_4:63970600-63970619 Msa0177120:intron 40.0%
TGACACCACATTCAACTTTG+AGG - chr1_4:63971229-63971248 None:intergenic 40.0%
ACAATGGTTGGATGATACTG+AGG + chr1_4:63971376-63971395 Msa0177120:CDS 40.0%
!! ACTTTTTCCTCACATAAGGC+TGG + chr1_4:63971464-63971483 Msa0177120:CDS 40.0%
! CTCAATCGGTTTCCTTATCT+GGG - chr1_4:63971588-63971607 None:intergenic 40.0%
CTAGAAGCTAAGCCCATTAA+GGG + chr1_4:63971752-63971771 Msa0177120:CDS 40.0%
CGAGCTATAGTACCCTTAAT+GGG - chr1_4:63971767-63971786 None:intergenic 40.0%
ACGAGCTATAGTACCCTTAA+TGG - chr1_4:63971768-63971787 None:intergenic 40.0%
!! ATTAAGGGTACTATAGCTCG+TGG + chr1_4:63971767-63971786 Msa0177120:CDS 40.0%
TTTCAGTGAAAAGGATCAGG+CGG + chr1_4:63972071-63972090 Msa0177120:intron 40.0%
! GACCTTCTAAGAAATGACCT+TGG + chr1_4:63972111-63972130 Msa0177120:CDS 40.0%
GACCAAGGTCATTTCTTAGA+AGG - chr1_4:63972116-63972135 None:intergenic 40.0%
GATTGTACTTCCATGAGATG+CGG - chr1_4:63972168-63972187 None:intergenic 40.0%
ACAATGGTGAGTACAATTCG+TGG + chr1_4:63972204-63972223 Msa0177120:CDS 40.0%
CAATGGTGAGTACAATTCGT+GGG + chr1_4:63972205-63972224 Msa0177120:CDS 40.0%
GTACAATTCGTGGGAAAAAG+AGG + chr1_4:63972214-63972233 Msa0177120:CDS 40.0%
TCTCTTGAAAGTTGTTCTCG+AGG + chr1_4:63972330-63972349 Msa0177120:CDS 40.0%
TCTCTTCGTATTCGTCTTCT+GGG - chr1_4:63972488-63972507 None:intergenic 40.0%
ATCTCTTCGTATTCGTCTTC+TGG - chr1_4:63972489-63972508 None:intergenic 40.0%
GCTTCAGTCATAACATATCC+AGG - chr1_4:63972688-63972707 None:intergenic 40.0%
CCTTTGCATTCCTTCTGTAA+AGG - chr1_4:63972728-63972747 None:intergenic 40.0%
CCTTTACAGAAGGAATGCAA+AGG + chr1_4:63972725-63972744 Msa0177120:three_prime_UTR 40.0%
CAAAGGATCCAAAAGAATGG+TGG + chr1_4:63972742-63972761 Msa0177120:three_prime_UTR 40.0%
GTGTGCTTACAAGCTTGATT+TGG + chr1_4:63972839-63972858 Msa0177120:three_prime_UTR 40.0%
! CATGTGCTTGGCAGTAATTT+TGG + chr1_4:63972891-63972910 Msa0177120:three_prime_UTR 40.0%
CAAATGTCCCCAATTTCACA+AGG - chr1_4:63973006-63973025 None:intergenic 40.0%
AACACATTGCAGAAACCATG+TGG - chr1_4:63973048-63973067 None:intergenic 40.0%
CTGTGTCACGAGAAATATCT+TGG + chr1_4:63973104-63973123 Msa0177120:three_prime_UTR 40.0%
! TGGCCATCTCACTTATTTCT+TGG + chr1_4:63973124-63973143 Msa0177120:three_prime_UTR 40.0%
! GGCCATCTCACTTATTTCTT+GGG + chr1_4:63973125-63973144 Msa0177120:three_prime_UTR 40.0%
CATTTGTGAGTCCAACAAAC+TGG - chr1_4:63973217-63973236 None:intergenic 40.0%
ATTGAGTGAGATCATCGAGA+AGG - chr1_4:63973274-63973293 None:intergenic 40.0%
TCTCACTCAATATCGCAAAC+TGG + chr1_4:63973283-63973302 Msa0177120:three_prime_UTR 40.0%
ACTCAATATCGCAAACTGGT+GGG + chr1_4:63973287-63973306 Msa0177120:three_prime_UTR 40.0%
TTGTTGTACACACAGTTGGT+AGG + chr1_4:63973351-63973370 Msa0177120:three_prime_UTR 40.0%
GTTGAAAGATGGAAATGTCG+TGG - chr1_4:63973389-63973408 None:intergenic 40.0%
AAGTATATAGCGATGCCGAT+TGG + chr1_4:63973489-63973508 Msa0177120:three_prime_UTR 40.0%
! AGTATATAGCGATGCCGATT+GGG + chr1_4:63973490-63973509 Msa0177120:three_prime_UTR 40.0%
GCGAGAGGGTAATGAAATGA+AGG - chr1_4:63962966-63962985 None:intergenic 45.0%
GAATAGCATGAATGCGCGAA+AGG - chr1_4:63962995-63963014 None:intergenic 45.0%
GATCCATTGGCAAATCACGT+GGG - chr1_4:63963086-63963105 None:intergenic 45.0%
AGATCCATTGGCAAATCACG+TGG - chr1_4:63963087-63963106 None:intergenic 45.0%
GAAACAAGAAACCCTTGCGA+AGG - chr1_4:63963433-63963452 None:intergenic 45.0%
AGAATTGCCTCTACAGAAGC+AGG + chr1_4:63963557-63963576 Msa0177120:CDS 45.0%
GAATTGCCTCTACAGAAGCA+GGG + chr1_4:63963558-63963577 Msa0177120:CDS 45.0%
ACAAAACCCTGCTTCTGTAG+AGG - chr1_4:63963567-63963586 None:intergenic 45.0%
!! TACAGAAGCAGGGTTTTGTC+AGG + chr1_4:63963568-63963587 Msa0177120:CDS 45.0%
GTCTCCAATTTGAACGTGGA+TGG + chr1_4:63963692-63963711 Msa0177120:intron 45.0%
ATCGTATTATCACCTGGACC+TGG + chr1_4:63964119-63964138 Msa0177120:CDS 45.0%
ACAAAGGCTTTGCACTAGAC+GGG + chr1_4:63964632-63964651 Msa0177120:intron 45.0%
! AGGTTTGCTCAACCAGAAAG+TGG - chr1_4:63965332-63965351 None:intergenic 45.0%
ATCTCTTCCCGTGGTTTGAT+AGG + chr1_4:63966173-63966192 Msa0177120:intron 45.0%
ACCCAATGCCTATCAAACCA+CGG - chr1_4:63966184-63966203 None:intergenic 45.0%
!! TAGGCATTGGGTTATGTGCA+TGG + chr1_4:63966192-63966211 Msa0177120:intron 45.0%
CATGCATCTGAACCAGTTCA+CGG + chr1_4:63966228-63966247 Msa0177120:CDS 45.0%
ATGCATCTGAACCAGTTCAC+GGG + chr1_4:63966229-63966248 Msa0177120:CDS 45.0%
TGCAGTGAAGTTGAGCACAA+TGG + chr1_4:63966399-63966418 Msa0177120:intron 45.0%
GCAGTGAAGTTGAGCACAAT+GGG + chr1_4:63966400-63966419 Msa0177120:intron 45.0%
!! CAATGGGTGCCAACTTTTTC+AGG + chr1_4:63966416-63966435 Msa0177120:CDS 45.0%
!!! CTTTTTCAGGGCATACCTTC+TGG + chr1_4:63966429-63966448 Msa0177120:CDS 45.0%
TTGATGTTGCTCCGCAATTG+TGG + chr1_4:63966651-63966670 Msa0177120:intron 45.0%
!!! TCCGTCTCCTTTGTTTTAGG+AGG + chr1_4:63967021-63967040 Msa0177120:intron 45.0%
TTCCAAGGGAAAGAGATGTC+GGG + chr1_4:63967180-63967199 Msa0177120:intron 45.0%
GCTATTGGAATGAGCACTTC+AGG - chr1_4:63967729-63967748 None:intergenic 45.0%
TGGGAGTCAAGCATTCTACA+AGG + chr1_4:63967922-63967941 Msa0177120:CDS 45.0%
CATTCTACAAGGCCACACTA+TGG + chr1_4:63967933-63967952 Msa0177120:CDS 45.0%
! GAATATTTGACTTCCGTGGC+AGG - chr1_4:63968086-63968105 None:intergenic 45.0%
TTCTAGTGTGTGCATGAGTG+GGG - chr1_4:63968211-63968230 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr1_4:63968372-63968391 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr1_4:63968371-63968390 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + chr1_4:63968371-63968390 Msa0177120:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG + chr1_4:63968372-63968391 Msa0177120:intron 45.0%
ACTTTCTTTAGCACATGCGC+AGG + chr1_4:63968697-63968716 Msa0177120:intron 45.0%
GGATAGTTCTTCCACAGAGA+TGG + chr1_4:63968892-63968911 Msa0177120:CDS 45.0%
! AAAAGCGTGCTCTTCCCTAT+CGG - chr1_4:63969153-63969172 None:intergenic 45.0%
!! AAGAGCACGCTTTTCGTTCA+TGG + chr1_4:63969159-63969178 Msa0177120:CDS 45.0%
! AGAGCACGCTTTTCGTTCAT+GGG + chr1_4:63969160-63969179 Msa0177120:CDS 45.0%
GAGGAAAAGGTGGATCACTT+TGG + chr1_4:63969182-63969201 Msa0177120:CDS 45.0%
! AGTGATGGGAGTTCAAAAGG+TGG + chr1_4:63969418-63969437 Msa0177120:intron 45.0%
GGTGGGAAACGATAGATGAT+AGG + chr1_4:63970035-63970054 Msa0177120:intron 45.0%
CGAGGGAGACAGTAACAAAA+AGG - chr1_4:63970230-63970249 None:intergenic 45.0%
! GATTTTCACGGCGGATATGT+TGG + chr1_4:63970329-63970348 Msa0177120:CDS 45.0%
! GGCGGATATGTTGGTTACAT+CGG + chr1_4:63970338-63970357 Msa0177120:CDS 45.0%
! GCGGATATGTTGGTTACATC+GGG + chr1_4:63970339-63970358 Msa0177120:CDS 45.0%
TGTCCTCCCTCAAAGTAAGT+TGG + chr1_4:63970584-63970603 Msa0177120:intron 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - chr1_4:63970626-63970645 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG - chr1_4:63970771-63970790 None:intergenic 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - chr1_4:63970626-63970645 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG - chr1_4:63970771-63970790 None:intergenic 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - chr1_4:63970626-63970645 None:intergenic 45.0%
TGAGGTCATACCTGCAACAT+AGG - chr1_4:63971211-63971230 None:intergenic 45.0%
GAGAAGCTTCTGAGCTTAAC+TGG + chr1_4:63971398-63971417 Msa0177120:CDS 45.0%
!! TGAGCTTAACTGGTTCTGTG+AGG + chr1_4:63971408-63971427 Msa0177120:CDS 45.0%
!! CTTAACTGGTTCTGTGAGGA+TGG + chr1_4:63971412-63971431 Msa0177120:CDS 45.0%
! TGGTTCTGTGAGGATGGATT+TGG + chr1_4:63971418-63971437 Msa0177120:CDS 45.0%
! CTGTGAGGATGGATTTGGAA+AGG + chr1_4:63971423-63971442 Msa0177120:CDS 45.0%
GTTTCCTTATCTGGGTTGTG+AGG - chr1_4:63971580-63971599 None:intergenic 45.0%
! CCTCAATCGGTTTCCTTATC+TGG - chr1_4:63971589-63971608 None:intergenic 45.0%
CCAGATAAGGAAACCGATTG+AGG + chr1_4:63971586-63971605 Msa0177120:CDS 45.0%
AAGGAATCCAGCACCTTATG+CGG + chr1_4:63971646-63971665 Msa0177120:CDS 45.0%
AAATTCAGCCAAGCCGCATA+AGG - chr1_4:63971662-63971681 None:intergenic 45.0%
! GGCTTGGCTGAATTTTCCAA+AGG + chr1_4:63971667-63971686 Msa0177120:CDS 45.0%
TATCACTCCTATCCAACTGC+AGG - chr1_4:63971730-63971749 None:intergenic 45.0%
GCTAGAAGCTAAGCCCATTA+AGG + chr1_4:63971751-63971770 Msa0177120:CDS 45.0%
! CAGCTGCTTTGCATCCAAAT+AGG - chr1_4:63972017-63972036 None:intergenic 45.0%
TGTGTCAAAGCTGCATTTCC+TGG + chr1_4:63972258-63972277 Msa0177120:CDS 45.0%
CGCACCAAAGTTGAGATCAA+TGG + chr1_4:63972296-63972315 Msa0177120:CDS 45.0%
CAACAGTTGCCCTTTACAGA+AGG + chr1_4:63972715-63972734 Msa0177120:three_prime_UTR 45.0%
!! GTGAGGTTCGCTTTTCTAAC+AGG + chr1_4:63972790-63972809 Msa0177120:three_prime_UTR 45.0%
! CAAGACTTGGTCCAGTTTGT+TGG + chr1_4:63973203-63973222 Msa0177120:three_prime_UTR 45.0%
CACTCAATATCGCAAACTGG+TGG + chr1_4:63973286-63973305 Msa0177120:three_prime_UTR 45.0%
ACTGGATGGTGTATGTTCCT+AGG + chr1_4:63973544-63973563 Msa0177120:three_prime_UTR 45.0%
!! AAAAACATAATATTAAAAAT+TGG - chr1_4:63966021-63966040 None:intergenic 5.0%
!! TAAATAAATAAATAAAAACA+CGG - chr1_4:63968002-63968021 None:intergenic 5.0%
! TCTCCCACGTGATTTGCCAA+TGG + chr1_4:63963080-63963099 Msa0177120:five_prime_UTR 50.0%
GACATATGAGGCGCAAAGAC+AGG - chr1_4:63963365-63963384 None:intergenic 50.0%
TTGCGCCTCATATGTCCTAC+AGG + chr1_4:63963369-63963388 Msa0177120:CDS 50.0%
ACTCGCCTGTAGGACATATG+AGG - chr1_4:63963377-63963396 None:intergenic 50.0%
CAAGAAACCCTTGCGAAGGA+GGG - chr1_4:63963429-63963448 None:intergenic 50.0%
ACAAGAAACCCTTGCGAAGG+AGG - chr1_4:63963430-63963449 None:intergenic 50.0%
GATGTATGTAATCGCCGCGA+TGG + chr1_4:63963462-63963481 Msa0177120:CDS 50.0%
CCTATATCTTCTGGGCATGC+CGG - chr1_4:63964149-63964168 None:intergenic 50.0%
CGCTGCTATCAGGTGTATCA+GGG - chr1_4:63964417-63964436 None:intergenic 50.0%
CAAAGGCTTTGCACTAGACG+GGG + chr1_4:63964633-63964652 Msa0177120:intron 50.0%
CCTATTCTGGGTGTTTGCCT+CGG + chr1_4:63965246-63965265 Msa0177120:CDS 50.0%
AGAGCGAGACTGTGTTAGCA+AGG - chr1_4:63965483-63965502 None:intergenic 50.0%
CACGGGAAGAGATTAAGCCA+AGG - chr1_4:63966166-63966185 None:intergenic 50.0%
CTTGGCTTAATCTCTTCCCG+TGG + chr1_4:63966164-63966183 Msa0177120:intron 50.0%
TCCCGTGGTTTGATAGGCAT+TGG + chr1_4:63966179-63966198 Msa0177120:intron 50.0%
CCCAATGCCTATCAAACCAC+GGG - chr1_4:63966183-63966202 None:intergenic 50.0%
CCCGTGGTTTGATAGGCATT+GGG + chr1_4:63966180-63966199 Msa0177120:intron 50.0%
! CGTGAACTGGTTCAGATGCA+TGG - chr1_4:63966230-63966249 None:intergenic 50.0%
!! GGTGGCTTGATAGTGAGGAA+GGG + chr1_4:63967201-63967220 Msa0177120:intron 50.0%
GGAAGGGATGCATCACATAG+TGG + chr1_4:63967217-63967236 Msa0177120:intron 50.0%
AATGATGGCACTGCGGAATC+TGG - chr1_4:63967512-63967531 None:intergenic 50.0%
GGTGGTTCGATATCATTCGC+TGG + chr1_4:63967683-63967702 Msa0177120:intron 50.0%
GAACTTCCGTTTCCTGCTTC+AGG - chr1_4:63967858-63967877 None:intergenic 50.0%
AACACCTGCACACCATAGTG+TGG - chr1_4:63967948-63967967 None:intergenic 50.0%
GAGTGGGGAACACAGTTCTT+CGG - chr1_4:63968196-63968215 None:intergenic 50.0%
AAAGCGTGCTCTTCCCTATC+GGG - chr1_4:63969152-63969171 None:intergenic 50.0%
TCGTTCATGGGAGGAAAAGG+TGG + chr1_4:63969172-63969191 Msa0177120:CDS 50.0%
!! CGTTCAGGTTGTCTGATCAG+AGG + chr1_4:63969215-63969234 Msa0177120:CDS 50.0%
GATGGGAGTTCAAAAGGTGG+TGG + chr1_4:63969421-63969440 Msa0177120:CDS 50.0%
! AGGTGGTGGCCATTTATCAC+TGG + chr1_4:63969435-63969454 Msa0177120:CDS 50.0%
! TGTTGGTTACATCGGGTAGG+TGG + chr1_4:63970346-63970365 Msa0177120:intron 50.0%
ATAGCTGCACCAAACTCTGC+TGG + chr1_4:63970544-63970563 Msa0177120:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG + chr1_4:63970606-63970625 Msa0177120:intron 50.0%
TGGAACCTGTGCAATGCACT+GGG - chr1_4:63970751-63970770 None:intergenic 50.0%
TTGGAACCTGTGCAATGCAC+TGG - chr1_4:63970752-63970771 None:intergenic 50.0%
TGCCCTCCCTCAAAGTAAGT+TGG + chr1_4:63970778-63970797 Msa0177120:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG + chr1_4:63970606-63970625 Msa0177120:intron 50.0%
TGGAACCTGTGCAATGCACT+GGG - chr1_4:63970751-63970770 None:intergenic 50.0%
TTGGAACCTGTGCAATGCAC+TGG - chr1_4:63970752-63970771 None:intergenic 50.0%
TGCCCTCCCTCAAAGTAAGT+TGG + chr1_4:63970778-63970797 Msa0177120:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG + chr1_4:63970606-63970625 Msa0177120:intron 50.0%
AACAGTCCCAGTGCATTGCA+CGG + chr1_4:63970742-63970761 Msa0177120:intron 50.0%
! TGCGAAACCAGCCTTATGTG+AGG - chr1_4:63971474-63971493 None:intergenic 50.0%
TGTGCCTCACAACCCAGATA+AGG + chr1_4:63971573-63971592 Msa0177120:CDS 50.0%
!! TTTGCTGTTCTTCCCCTGAG+AGG + chr1_4:63971702-63971721 Msa0177120:CDS 50.0%
AGAGGTTCCTGCAGTTGGAT+AGG + chr1_4:63971720-63971739 Msa0177120:CDS 50.0%
!! TATAGCTCGTGGTGCTACTG+AGG + chr1_4:63971778-63971797 Msa0177120:CDS 50.0%
CAGGATCACATACACGACCA+AGG - chr1_4:63972131-63972150 None:intergenic 50.0%
CTTGGTCGTGTATGTGATCC+TGG + chr1_4:63972129-63972148 Msa0177120:CDS 50.0%
GTCAAAGCTGCATTTCCTGG+TGG + chr1_4:63972261-63972280 Msa0177120:CDS 50.0%
TTTCCTGGTGGTTCGATGAC+AGG + chr1_4:63972273-63972292 Msa0177120:CDS 50.0%
! TGTTCTCGAGGCATCTACTC+AGG + chr1_4:63972342-63972361 Msa0177120:CDS 50.0%
CATGAGGGTGAAGCTTCCAT+AGG + chr1_4:63972432-63972451 Msa0177120:CDS 50.0%
AAGCTTCCATAGGAGCTGGA+GGG + chr1_4:63972442-63972461 Msa0177120:CDS 50.0%
TGTCTGACCATGGGCCAAAA+AGG - chr1_4:63972590-63972609 None:intergenic 50.0%
! ACAACGGGTTCTCATCTTCC+TGG + chr1_4:63972667-63972686 Msa0177120:three_prime_UTR 50.0%
TGGCGGTGTAGATTCGAAGC+GGG - chr1_4:63962933-63962952 None:intergenic 55.0%
GTGGCGGTGTAGATTCGAAG+CGG - chr1_4:63962934-63962953 None:intergenic 55.0%
!! GCGAAAGGGCATTAGCGAGA+GGG - chr1_4:63962980-63962999 None:intergenic 55.0%
CGCTCGTGTTTCTTCCATCG+CGG - chr1_4:63963479-63963498 None:intergenic 55.0%
! CATTTTGCCAGTCCCTCCTG+TGG + chr1_4:63964025-63964044 Msa0177120:intron 55.0%
TGAATCACCACAGGAGGGAC+TGG - chr1_4:63964035-63964054 None:intergenic 55.0%
! ATCACCTGGACCTGGTTCTC+CGG + chr1_4:63964127-63964146 Msa0177120:CDS 55.0%
CCGGCATGCCCAGAAGATAT+AGG + chr1_4:63964146-63964165 Msa0177120:CDS 55.0%
GCGCTGCTATCAGGTGTATC+AGG - chr1_4:63964418-63964437 None:intergenic 55.0%
ATACACCTGATAGCAGCGCG+TGG + chr1_4:63964419-63964438 Msa0177120:intron 55.0%
CAGCGCGTGGCTCAAGAAAT+AGG + chr1_4:63964432-63964451 Msa0177120:intron 55.0%
CCGAGGCAAACACCCAGAAT+AGG - chr1_4:63965249-63965268 None:intergenic 55.0%
AGGGAAATACCTGGTGTCCG+AGG - chr1_4:63965266-63965285 None:intergenic 55.0%
CACCCGACATCTCTTTCCCT+TGG - chr1_4:63967185-63967204 None:intergenic 55.0%
CAAGGGAAAGAGATGTCGGG+TGG + chr1_4:63967183-63967202 Msa0177120:intron 55.0%
!! TGTCGGGTGGCTTGATAGTG+AGG + chr1_4:63967196-63967215 Msa0177120:intron 55.0%
!! GGGTGGCTTGATAGTGAGGA+AGG + chr1_4:63967200-63967219 Msa0177120:intron 55.0%
AAGGCCACACTATGGTGTGC+AGG + chr1_4:63967941-63967960 Msa0177120:CDS 55.0%
TGGCAGGTTGCAACACTCTC+TGG - chr1_4:63968070-63968089 None:intergenic 55.0%
!! GAGAGTGTTGCAACCTGCCA+CGG + chr1_4:63968070-63968089 Msa0177120:CDS 55.0%
GATCACTTGGCTGGGCAAGT+TGG + chr1_4:63968809-63968828 Msa0177120:CDS 55.0%
TGTCACCACCAAGCCATTCC+CGG + chr1_4:63968977-63968996 Msa0177120:intron 55.0%
AACAAGGTCCGGGAATGGCT+TGG - chr1_4:63968988-63969007 None:intergenic 55.0%
! GCACGCTTTTCGTTCATGGG+AGG + chr1_4:63969163-63969182 Msa0177120:CDS 55.0%
ACACTTCTTACCTAGCCCCC+AGG + chr1_4:63969571-63969590 Msa0177120:intron 55.0%
ATATGCATGTCCTGGGGGCT+AGG - chr1_4:63969584-63969603 None:intergenic 55.0%
! GCTGATTGGCCAGCAGAGTT+TGG - chr1_4:63970556-63970575 None:intergenic 55.0%
ACAGTCCCAGTGCATTGCAC+AGG + chr1_4:63970743-63970762 Msa0177120:intron 55.0%
ACAGTCCCAGTGCATTGCAC+AGG + chr1_4:63970743-63970762 Msa0177120:intron 55.0%
ACAGTCCCAGTGCATTGCAC+GGG + chr1_4:63970743-63970762 Msa0177120:intron 55.0%
TGGAACCCGTGCAATGCACT+GGG - chr1_4:63971139-63971158 None:intergenic 55.0%
ATGGAACCCGTGCAATGCAC+TGG - chr1_4:63971140-63971159 None:intergenic 55.0%
ATCCAGCACCTTATGCGGCT+TGG + chr1_4:63971651-63971670 Msa0177120:CDS 55.0%
CAACTGCAGGAACCTCTCAG+GGG - chr1_4:63971717-63971736 None:intergenic 55.0%
CCAACTGCAGGAACCTCTCA+GGG - chr1_4:63971718-63971737 None:intergenic 55.0%
TCCAACTGCAGGAACCTCTC+AGG - chr1_4:63971719-63971738 None:intergenic 55.0%
TGTTGACGTGCCGCATCTCA+TGG + chr1_4:63972155-63972174 Msa0177120:CDS 55.0%
GGCATCTACTCAGGCTGCAT+TGG + chr1_4:63972351-63972370 Msa0177120:CDS 55.0%
GGTGAAGCTTCCATAGGAGC+TGG + chr1_4:63972438-63972457 Msa0177120:CDS 55.0%
GAAGCTTCCATAGGAGCTGG+AGG + chr1_4:63972441-63972460 Msa0177120:CDS 55.0%
AGCTTCCATAGGAGCTGGAG+GGG + chr1_4:63972443-63972462 Msa0177120:CDS 55.0%
AATTGCCCCTCCAGCTCCTA+TGG - chr1_4:63972451-63972470 None:intergenic 55.0%
! TAGCGATGCCGATTGGGTTG+TGG + chr1_4:63973496-63973515 Msa0177120:three_prime_UTR 55.0%
CTGGACAGCCACAACCCAAT+CGG - chr1_4:63973507-63973526 None:intergenic 55.0%
CGGTGTAGATTCGAAGCGGG+TGG - chr1_4:63962930-63962949 None:intergenic 60.0%
!! CGCGAAAGGGCATTAGCGAG+AGG - chr1_4:63962981-63963000 None:intergenic 60.0%
TGTCCAGACCCTCCTTCGCA+AGG + chr1_4:63963418-63963437 Msa0177120:CDS 60.0%
GTCCAGACCCTCCTTCGCAA+GGG + chr1_4:63963419-63963438 Msa0177120:CDS 60.0%
AACCCTTGCGAAGGAGGGTC+TGG - chr1_4:63963424-63963443 None:intergenic 60.0%
TTGAGCCACGCGCTGCTATC+AGG - chr1_4:63964427-63964446 None:intergenic 60.0%
AACCAGTTCACGGGCGTCTG+AGG + chr1_4:63966238-63966257 Msa0177120:CDS 60.0%
TACCTCAGACGCCCGTGAAC+TGG - chr1_4:63966243-63966262 None:intergenic 60.0%
! CACTTGGCTGGGCAAGTTGG+TGG + chr1_4:63968812-63968831 Msa0177120:CDS 60.0%
! AAGGTCCGGGAATGGCTTGG+TGG - chr1_4:63968985-63969004 None:intergenic 60.0%
AGCCAAGCCGCATAAGGTGC+TGG - chr1_4:63971656-63971675 None:intergenic 60.0%
CCCTGAGAGGTTCCTGCAGT+TGG + chr1_4:63971715-63971734 Msa0177120:CDS 60.0%
!! AGCTCGTGGTGCTACTGAGG+AGG + chr1_4:63971781-63971800 Msa0177120:CDS 60.0%
TGCGGCACGTCAACAGATCC+AGG - chr1_4:63972150-63972169 None:intergenic 60.0%
!! AACCACGCTTTGGGGTGCCA+AGG - chr1_4:63973436-63973455 None:intergenic 60.0%
CATGCCGGAGAACCAGGTCC+AGG - chr1_4:63964134-63964153 None:intergenic 65.0%
TCTGGGCATGCCGGAGAACC+AGG - chr1_4:63964140-63964159 None:intergenic 65.0%
GGGTGTTTGCCTCGGACACC+AGG + chr1_4:63965254-63965273 Msa0177120:CDS 65.0%
GCGCCTGTCATCGAACCACC+AGG - chr1_4:63972279-63972298 None:intergenic 65.0%
!! CACGCTTTGGGGTGCCAAGG+AGG - chr1_4:63973433-63973452 None:intergenic 65.0%
CTCCTTGGCACCCCAAAGCG+TGG + chr1_4:63973431-63973450 Msa0177120:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 63962916 63973628 63962916 ID=Msa0177120;Name=Msa0177120
chr1_4 mRNA 63962916 63973628 63962916 ID=Msa0177120-mRNA-1;Parent=Msa0177120;Name=Msa0177120-mRNA-1;_AED=0.11;_eAED=0.11;_QI=283|0.92|0.92|1|0.92|0.85|14|1071|872
chr1_4 exon 63962916 63963169 63962916 ID=Msa0177120-mRNA-1:exon:20727;Parent=Msa0177120-mRNA-1
chr1_4 exon 63963328 63963660 63963328 ID=Msa0177120-mRNA-1:exon:20728;Parent=Msa0177120-mRNA-1
chr1_4 exon 63964036 63964167 63964036 ID=Msa0177120-mRNA-1:exon:20729;Parent=Msa0177120-mRNA-1
chr1_4 exon 63965208 63965275 63965208 ID=Msa0177120-mRNA-1:exon:20730;Parent=Msa0177120-mRNA-1
chr1_4 exon 63966195 63966259 63966195 ID=Msa0177120-mRNA-1:exon:20731;Parent=Msa0177120-mRNA-1
chr1_4 exon 63966404 63966470 63966404 ID=Msa0177120-mRNA-1:exon:20732;Parent=Msa0177120-mRNA-1
chr1_4 exon 63967684 63967962 63967684 ID=Msa0177120-mRNA-1:exon:20733;Parent=Msa0177120-mRNA-1
chr1_4 exon 63968061 63968204 63968061 ID=Msa0177120-mRNA-1:exon:20734;Parent=Msa0177120-mRNA-1
chr1_4 exon 63968719 63968913 63968719 ID=Msa0177120-mRNA-1:exon:20735;Parent=Msa0177120-mRNA-1
chr1_4 exon 63969157 63969236 63969157 ID=Msa0177120-mRNA-1:exon:20736;Parent=Msa0177120-mRNA-1
chr1_4 exon 63969420 63969522 63969420 ID=Msa0177120-mRNA-1:exon:20737;Parent=Msa0177120-mRNA-1
chr1_4 exon 63970278 63970360 63970278 ID=Msa0177120-mRNA-1:exon:20738;Parent=Msa0177120-mRNA-1
chr1_4 exon 63971220 63971837 63971220 ID=Msa0177120-mRNA-1:exon:20739;Parent=Msa0177120-mRNA-1
chr1_4 exon 63972077 63973628 63972077 ID=Msa0177120-mRNA-1:exon:20740;Parent=Msa0177120-mRNA-1
chr1_4 five_prime_UTR 63962916 63963169 63962916 ID=Msa0177120-mRNA-1:five_prime_utr;Parent=Msa0177120-mRNA-1
chr1_4 five_prime_UTR 63963328 63963356 63963328 ID=Msa0177120-mRNA-1:five_prime_utr;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63963357 63963660 63963357 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63964036 63964167 63964036 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63965208 63965275 63965208 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63966195 63966259 63966195 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63966404 63966470 63966404 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63967684 63967962 63967684 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63968061 63968204 63968061 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63968719 63968913 63968719 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63969157 63969236 63969157 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63969420 63969522 63969420 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63970278 63970360 63970278 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63971220 63971837 63971220 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 CDS 63972077 63972557 63972077 ID=Msa0177120-mRNA-1:cds;Parent=Msa0177120-mRNA-1
chr1_4 three_prime_UTR 63972558 63973628 63972558 ID=Msa0177120-mRNA-1:three_prime_utr;Parent=Msa0177120-mRNA-1
Gene Sequence

>Msa0177120

ATGAACCTGTCTTTGCGCCTCATATGTCCTACAGGCGAGTACAAAAATGTGAGTTCTGTTTTGTCCAGACCCTCCTTCGCAAGGGTTTCTTGTTTCATGAAGAGAGATGTATGTAATCGCCGCGATGGAAGAAACACGAGCGTCTATTGCCAATTGACGCATGACCATTTAGAAGAATCATATAAAAGAAAGAAAAAGCTAGAATTGCCTCTACAGAAGCAGGGTTTTGTCAGGACTTTGTTGATTGATAACTATGACAGTTATACATACAATATATACCAGGACCTATCTATTATTAACGGTGTCCCTCCTGTGGTGATTCAAAATGATGATTGGACGTGGGACGAACTTTGCTATTACTTGTACGAAGAAAATGCATTTGATAACATCGTATTATCACCTGGACCTGGTTCTCCGGCATGCCCAGAAGATATAGGTATTTGTCTTCAAATATTGCGTGAATGCAGGGATATTCCTATTCTGGGTGTTTGCCTCGGACACCAGGCATTGGGTTATGTGCATGGAGCTCAAGTTGTCCATGCATCTGAACCAGTTCACGGGCGTCTGAGTGAAGTTGAGCACAATGGGTGCCAACTTTTTCAGGGCATACCTTCTGGTAGAAATTCTGGTTTCAAGGTGGTTCGATATCATTCGCTGGTGATAGATTCTGAATCGCTTCCTGAAGTGCTCATTCCAATAGCATGGACTTCAAATAGGACACTTCCATTTATTGGATCCGAGGTTTTGGACAAGTACAATGGTCATGAACTTCAGACTGATCAAAGCATTTTCCTTGATTCATTTTTGCCTGAAGCAGGAAACGGAAGTTCAAGCCTTGTTGACTATGGACAAACTAGAAATGCAGGGGTTCTTATGGGAGTCAAGCATTCTACAAGGCCACACTATGGTGTGCAGTTTCATCCAGAGAGTGTTGCAACCTGCCACGGAAGTCAAATATTCAAGAATTTTAGAGAGATTACAGATGATTATTGGCTGAGATGTAGGGCATCATACAACAAGGGAAAACGTGCTAATTCTGATGGTAAACCGAAGAACTGTGTTTCAAGTGCTAGTAGACTCTACAGACATTTAGTACATAATAATACTGAGGTGAACTACAAAACTTTGAAGTTGAAATGGAGGAAATTTGATCACTTGGCTGGGCAAGTTGGTGGAGCAAAAAGTATATTCTGTCAGTTGTTTGGACAGGAAGCTGAAAACACCTTTTGGTTGGATAGTTCTTCCACAGAGATGGGAAGAGCACGCTTTTCGTTCATGGGAGGAAAAGGTGGATCACTTTGGAAGCAGTTAACGTTCAGGTTGTCTGATCAGAGTGATGGGAGTTCAAAAGGTGGTGGCCATTTATCACTGGAAGATTCTGAAGGTTCTGTCAAAACAATATTCTTGGATGGAGGTTTTCTTGATTATTTGAACAAGGAGCTTCAATCATATCGTTATGATAAGGATGAATATGAAGGTCTACCATTTGATTTTCACGGCGGATATGTTGGTTACATCGGGTATGACCTCAAAGTTGAATGTGGTGTCACATGTAACCATCACAAATCTAAAACTCCAGATGCATGTTTTTTCTTTGCTGATAATCTTGTTGCTATTGATCACAAAAATGATGATGTTTATTTATTGGCTATACATGAAGAAAGTTCAAGTATTTCACAATGGTTGGATGATACTGAGGAGAAGCTTCTGAGCTTAACTGGTTCTGTGAGGATGGATTTGGAAAGGCAGTACTCTCATCCTTCAACTTTTTCCTCACATAAGGCTGGTTTCGCAGCTGAAAAATCTAAAGAGCAGTACCTTAGAGATGTTAAGAAGTGTCTAAACTATATTAGAGATGGAGAGAGCTATGAGTTGTGCCTCACAACCCAGATAAGGAAACCGATTGAGGTATTAAATTCTCTTGGACTTTACCTACATTTAAGAGAAAGGAATCCAGCACCTTATGCGGCTTGGCTGAATTTTCCAAAGGAAGATCTGTGTATTTGCTGTTCTTCCCCTGAGAGGTTCCTGCAGTTGGATAGGAGTGATATGCTAGAAGCTAAGCCCATTAAGGGTACTATAGCTCGTGGTGCTACTGAGGAGGAAGACAAACAACTCAAATTGAAATTACAGCTCAGTGAAAAGGATCAGGCGGAAAACCTGATGATTGTTGACCTTCTAAGAAATGACCTTGGTCGTGTATGTGATCCTGGATCTGTTGACGTGCCGCATCTCATGGAAGTACAATCATATGCAACTGTTCACACAATGGTGAGTACAATTCGTGGGAAAAAGAGGTCAGATATAAGTGCTGTAGACTGTGTCAAAGCTGCATTTCCTGGTGGTTCGATGACAGGCGCACCAAAGTTGAGATCAATGGAACTTCTTGATTCTCTTGAAAGTTGTTCTCGAGGCATCTACTCAGGCTGCATTGGATTTTTCTCATATAATCAAACATTTGATCTAAATATTGTCATAAGAACAGTTGTTATACATGAGGGTGAAGCTTCCATAGGAGCTGGAGGGGCAATTGTTGCTCTGTCAAACCCAGAAGACGAATACGAAGAGATGATCTTGAAAACAAAAGCACCAGCAAACACTGTGATAGATTATGAATAG
Protein sequence

>Msa0177120

MNLSLRLICPTGEYKNVSSVLSRPSFARVSCFMKRDVCNRRDGRNTSVYCQLTHDHLEESYKRKKKLELPLQKQGFVRTLLIDNYDSYTYNIYQDLSIINGVPPVVIQNDDWTWDELCYYLYEENAFDNIVLSPGPGSPACPEDIGICLQILRECRDIPILGVCLGHQALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHSLVIDSESLPEVLIPIAWTSNRTLPFIGSEVLDKYNGHELQTDQSIFLDSFLPEAGNGSSSLVDYGQTRNAGVLMGVKHSTRPHYGVQFHPESVATCHGSQIFKNFREITDDYWLRCRASYNKGKRANSDGKPKNCVSSASRLYRHLVHNNTEVNYKTLKLKWRKFDHLAGQVGGAKSIFCQLFGQEAENTFWLDSSSTEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGSVKTIFLDGGFLDYLNKELQSYRYDKDEYEGLPFDFHGGYVGYIGYDLKVECGVTCNHHKSKTPDACFFFADNLVAIDHKNDDVYLLAIHEESSSISQWLDDTEEKLLSLTGSVRMDLERQYSHPSTFSSHKAGFAAEKSKEQYLRDVKKCLNYIRDGESYELCLTTQIRKPIEVLNSLGLYLHLRERNPAPYAAWLNFPKEDLCICCSSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRNDLGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEGEASIGAGGAIVALSNPEDEYEEMILKTKAPANTVIDYE*